Query 012318
Match_columns 466
No_of_seqs 455 out of 3342
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 07:04:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012318.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012318hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3stj_A Protease DEGQ; serine p 100.0 4.6E-51 1.6E-55 411.9 34.4 298 126-464 14-336 (345)
2 4a8c_A Periplasmic PH-dependen 100.0 6.4E-49 2.2E-53 408.5 38.1 298 125-463 13-335 (436)
3 1lcy_A HTRA2 serine protease; 100.0 5.4E-49 1.8E-53 394.4 29.8 307 125-461 15-323 (325)
4 3qo6_A Protease DO-like 1, chl 100.0 1.5E-48 5E-53 394.8 32.5 298 123-463 15-334 (348)
5 1te0_A Protease DEGS; two doma 100.0 8.6E-49 2.9E-53 391.9 29.3 298 125-463 9-316 (318)
6 3pv2_A DEGQ; trypsin fold, PDZ 100.0 3.2E-48 1.1E-52 404.3 32.0 296 125-461 19-352 (451)
7 3num_A Serine protease HTRA1; 100.0 3.6E-49 1.2E-53 396.9 22.3 306 123-462 12-322 (332)
8 1y8t_A Hypothetical protein RV 100.0 1.9E-46 6.7E-51 375.8 33.8 295 125-463 6-315 (324)
9 1ky9_A Protease DO, DEGP, HTRA 100.0 8.1E-47 2.8E-51 393.4 26.4 295 126-461 14-356 (448)
10 4fln_A Protease DO-like 2, chl 100.0 1.9E-45 6.6E-50 386.8 34.5 287 133-463 45-358 (539)
11 1l1j_A Heat shock protease HTR 100.0 1.2E-35 4E-40 284.6 17.0 211 125-366 4-239 (239)
12 3sti_A Protease DEGQ; serine p 100.0 9.2E-35 3.1E-39 279.2 20.2 198 126-334 14-235 (245)
13 3lgi_A Protease DEGS; stress-s 100.0 1.7E-33 5.7E-38 269.6 23.2 199 125-334 20-227 (237)
14 3tjo_A Serine protease HTRA1; 100.0 9.1E-34 3.1E-38 270.4 20.5 199 124-332 30-230 (231)
15 3k6y_A Serine protease, possib 100.0 3.7E-30 1.3E-34 246.3 22.5 193 127-334 33-228 (237)
16 2as9_A Serine protease; trypsi 99.9 3.1E-22 1.1E-26 187.7 16.2 177 136-332 3-203 (210)
17 2w5e_A Putative serine proteas 99.9 6.3E-22 2.2E-26 177.9 17.5 135 154-319 20-155 (163)
18 1agj_A Epidermolytic toxin A; 99.9 6.2E-21 2.1E-25 182.6 16.8 170 135-330 43-240 (242)
19 2o8l_A V8 protease, taphylococ 99.8 1.1E-19 3.8E-24 177.3 21.2 177 134-333 18-212 (274)
20 2w7s_A Serine protease SPLA; h 99.8 1.6E-20 5.6E-25 174.3 12.6 157 155-330 22-197 (200)
21 1wcz_A Glutamyl endopeptidase; 99.8 2E-19 6.9E-24 174.9 20.3 177 134-333 18-212 (268)
22 2vid_A Serine protease SPLB; h 99.8 2.7E-19 9.3E-24 166.2 16.6 157 155-331 22-202 (204)
23 2h5c_A Alpha-lytic protease; s 99.8 1E-18 3.5E-23 162.1 15.9 153 157-327 18-191 (198)
24 2l97_A HTRA, putative serine p 99.8 5.4E-20 1.8E-24 160.2 4.9 123 312-463 2-128 (134)
25 1qtf_A Exfoliative toxin B; se 99.8 2.1E-18 7.1E-23 165.6 12.2 136 154-308 47-205 (246)
26 2qa9_E Streptogrisin-B; chymot 99.8 1.4E-17 4.8E-22 152.7 16.8 159 155-328 12-181 (185)
27 1hpg_A Glutamic acid specific 99.7 8.2E-17 2.8E-21 148.1 17.7 156 155-327 12-182 (187)
28 2oua_A Serine protease, protei 99.7 9.4E-17 3.2E-21 147.7 15.5 151 156-326 15-181 (188)
29 2ea3_A Chymotrypsin; celloulom 99.7 1.1E-15 3.9E-20 140.5 15.8 147 157-327 18-176 (189)
30 2sga_A Proteinase A; hydrolase 99.6 6.6E-16 2.3E-20 141.1 12.1 152 155-328 12-177 (181)
31 1mbm_A NSP4 proteinase, chymot 99.6 8.2E-16 2.8E-20 137.0 12.1 126 134-306 2-130 (198)
32 2pfe_A Protease A, alkaline se 99.6 8.8E-16 3E-20 140.8 12.3 148 158-327 18-179 (186)
33 2pzd_A Serine protease HTRA2; 99.6 2.5E-15 8.5E-20 126.5 10.8 102 358-462 2-103 (113)
34 2p3w_A Probable serine proteas 99.6 2.8E-15 9.5E-20 126.1 9.7 102 358-462 2-103 (112)
35 4ag1_A Chymase; hydrolase-de n 99.6 4.9E-13 1.7E-17 125.9 24.8 183 135-333 12-225 (226)
36 1cgh_A Cathepsin G; inflammati 99.6 2.2E-13 7.4E-18 128.4 20.6 181 135-332 12-223 (224)
37 3rp2_A RAT MAST cell protease 99.6 6.5E-13 2.2E-17 124.7 22.7 181 135-331 12-223 (224)
38 1pq7_A Trypsin; ultra-high res 99.5 1.4E-13 4.9E-18 129.6 17.5 180 135-329 12-222 (224)
39 1iau_A Granzyme B; hydrolase-h 99.5 7.1E-13 2.4E-17 125.0 21.1 181 135-332 12-225 (227)
40 1p3c_A Glutamyl-endopeptidase; 99.5 6.3E-14 2.1E-18 131.1 12.2 165 154-331 29-213 (215)
41 1a7s_A Heparin binding protein 99.5 7.2E-13 2.5E-17 124.7 19.5 177 135-334 12-220 (225)
42 1fuj_A PR3, myeloblastin; hydr 99.5 2.5E-12 8.7E-17 120.6 22.5 176 135-331 12-220 (221)
43 3fzz_A Granzyme C; hydrolase, 99.5 1.2E-12 4.2E-17 123.1 20.3 182 135-332 12-226 (227)
44 1npm_A Neuropsin; serine prote 99.5 1.1E-12 3.9E-17 123.5 19.9 176 135-331 12-224 (225)
45 4e7n_A Snake-venom thrombin-li 99.5 1.7E-12 5.8E-17 122.9 21.0 183 135-334 12-231 (238)
46 2zch_P Prostate-specific antig 99.5 1E-12 3.6E-17 124.6 19.5 180 135-333 12-235 (237)
47 1fxy_A Coagulation factor XA-t 99.5 5.5E-13 1.9E-17 125.9 17.5 180 135-332 12-225 (228)
48 2aiq_A Protein C activator; sn 99.5 6.6E-13 2.3E-17 125.6 17.8 180 135-334 12-224 (231)
49 1mza_A Pro-granzyme K; apoptos 99.5 1.6E-12 5.4E-17 123.6 20.2 183 135-332 14-235 (240)
50 3fan_A Non-structural protein; 99.5 4.3E-14 1.5E-18 128.0 8.6 129 134-308 17-146 (213)
51 2xw9_A Complement factor D; im 99.5 1.5E-12 5.3E-17 122.6 19.8 181 135-331 12-227 (228)
52 1hj8_A Trypsin I; hydrolase, r 99.5 1.3E-12 4.3E-17 123.0 18.9 176 135-332 12-220 (222)
53 1azz_A Collagenase; complex (s 99.5 6.9E-13 2.4E-17 125.1 17.1 179 135-332 12-223 (226)
54 1eq9_A Chymotrypsin; FIRE ANT, 99.5 7.5E-13 2.6E-17 124.5 17.0 181 135-331 12-220 (222)
55 3s9c_A Vipera russelli protein 99.5 3.3E-12 1.1E-16 120.7 21.5 181 135-334 12-227 (234)
56 3ncl_A Suppressor of tumorigen 99.5 1.4E-12 4.8E-17 123.7 19.0 189 135-331 12-239 (241)
57 1euf_A Duodenase; serine prote 99.5 2.1E-12 7E-17 121.9 19.5 180 135-331 12-223 (227)
58 1si5_H Scatter factor, hepatoc 99.5 6.1E-12 2.1E-16 119.6 22.8 185 135-334 11-229 (240)
59 1orf_A Granzyme A; hydrolase-h 99.5 3.3E-12 1.1E-16 121.0 20.6 178 135-332 12-231 (234)
60 3s69_A Thrombin-like enzyme de 99.5 2.3E-12 8E-17 121.6 19.5 181 135-334 12-227 (234)
61 1gvz_A Kallikrein-1E2; antigen 99.5 7E-13 2.4E-17 125.8 15.9 177 135-332 12-234 (237)
62 1ym0_A Fibrinotic enzyme compo 99.5 5.1E-12 1.8E-16 119.8 21.6 186 135-333 12-237 (238)
63 2bdg_A Kallikrein-4; serine pr 99.5 2.6E-12 8.8E-17 120.9 19.4 177 135-332 12-222 (223)
64 2psx_A Kallikrein-5; zinc inhi 99.5 1.9E-12 6.5E-17 122.1 18.4 179 135-333 12-225 (227)
65 3h7t_A Group 3 allergen smipp- 99.5 1.2E-12 4.1E-17 123.6 17.0 184 135-334 12-231 (235)
66 1lo6_A Kallikrein 6, HK6; seri 99.5 1.9E-12 6.3E-17 121.9 18.2 177 135-332 12-221 (223)
67 4i8h_A Cationic trypsin, beta- 99.5 1.8E-12 6.1E-17 121.7 18.1 179 135-333 12-222 (223)
68 3mfj_A Cationic trypsin; serin 99.5 2.5E-12 8.4E-17 121.1 18.7 176 135-332 12-221 (223)
69 2z7f_E Leukocyte elastase; ser 99.5 3.7E-12 1.3E-16 119.3 19.7 173 135-331 12-217 (218)
70 1ao5_A Glandular kallikrein-13 99.5 1.9E-12 6.6E-17 122.8 17.4 178 135-333 12-235 (237)
71 1ton_A Tonin; hydrolase(serine 99.5 3E-12 1E-16 121.3 18.7 176 135-333 12-233 (235)
72 1spj_A Kallikrein 1; serine pr 99.4 4.2E-12 1.4E-16 120.4 18.9 178 135-333 12-236 (238)
73 1bru_P Elastase, PPE; serine p 99.4 9.6E-12 3.3E-16 118.4 21.3 185 135-332 12-239 (241)
74 2zgc_A Granzyme M; serine prot 99.4 5.6E-12 1.9E-16 120.0 19.5 184 135-334 12-231 (240)
75 3gov_B MAsp-1; complement, ser 99.4 7.9E-12 2.7E-16 119.1 20.0 189 135-332 12-248 (251)
76 2qxi_A Kallikrein-7; S1 pocket 99.4 3.5E-12 1.2E-16 120.1 17.0 177 135-332 12-221 (224)
77 3beu_A Trypsin, SGT; beta shee 99.4 8.3E-12 2.9E-16 117.2 19.5 170 156-332 21-222 (224)
78 2asu_B Hepatocyte growth facto 99.4 5.6E-12 1.9E-16 119.5 18.1 188 135-334 9-228 (234)
79 3h7o_A Group 3 allergen smipp- 99.4 1.8E-12 6.3E-17 121.9 14.4 187 134-333 10-227 (228)
80 1m9u_A Earthworm fibrinolytic 99.4 4.5E-12 1.5E-16 120.5 17.2 183 135-329 12-239 (241)
81 2hlc_A Collagenase; serine pro 99.4 7.2E-12 2.4E-16 118.3 18.4 184 135-332 12-227 (230)
82 1gvk_B Elastase 1, peptide inh 99.4 1.3E-11 4.4E-16 117.4 20.2 185 135-332 12-238 (240)
83 1elt_A Elastase; serine protei 99.4 7.8E-12 2.7E-16 118.5 18.3 183 135-330 12-235 (236)
84 2oq5_A Transmembrane protease, 99.4 2.7E-11 9.1E-16 114.5 21.9 183 135-331 12-230 (232)
85 1aut_C Activated protein C; se 99.4 5.1E-12 1.8E-16 120.9 16.9 184 135-334 12-241 (250)
86 2any_A Kininogenin, plasma kal 99.4 1.3E-11 4.3E-16 117.4 19.2 188 135-333 12-237 (241)
87 3mhw_U Urokinase-type plasmino 99.4 1.9E-11 6.4E-16 116.3 19.8 188 135-331 12-245 (247)
88 1sgf_A 7S NGF, nerve growth fa 99.4 4.4E-12 1.5E-16 120.6 15.2 181 134-333 14-238 (240)
89 1t8o_A Chymotrypsin A; chymotr 99.4 1E-11 3.5E-16 118.5 17.5 181 135-332 27-243 (245)
90 2r0l_A Hepatocyte growth facto 99.4 3.1E-11 1E-15 115.2 20.4 185 135-334 12-241 (248)
91 3rm2_H Thrombin heavy chain; s 99.4 6.9E-12 2.3E-16 120.1 15.8 191 135-332 12-255 (259)
92 2i4s_A General secretion pathw 99.4 1.1E-12 3.7E-17 108.9 8.8 100 320-458 4-104 (105)
93 1ddj_A Plasminogen; catalytic 99.4 4.1E-11 1.4E-15 114.4 21.0 186 135-333 29-246 (247)
94 3bg8_A Coagulation factor XIA 99.4 1.3E-11 4.3E-16 117.3 17.2 187 135-332 12-236 (238)
95 2bdy_A Thrombin; thrombin, com 99.4 1E-11 3.4E-16 121.6 16.9 192 135-333 42-286 (289)
96 3gyl_B Prostasin; ENAC, zymoge 99.4 1.4E-11 4.7E-16 118.3 17.4 185 135-333 12-243 (261)
97 3tvj_B Mannan-binding lectin s 99.4 1.4E-11 4.7E-16 116.7 16.9 183 135-332 12-240 (242)
98 1rtf_B (TC)-T-PA, two chain ti 99.4 4.9E-11 1.7E-15 114.0 20.8 189 135-331 12-250 (252)
99 2olg_A Pro-phenoloxidase activ 99.4 4.5E-11 1.5E-15 116.1 20.4 189 135-329 34-274 (278)
100 2jkh_A Activated factor XA hea 99.4 7.7E-12 2.6E-16 118.9 14.6 184 135-334 12-235 (241)
101 1pyt_D TC, PCPA-TC, chymotryps 99.4 3.4E-11 1.1E-15 115.3 19.0 184 135-331 25-249 (251)
102 2jde_A Urokinase-type plasmino 99.4 3.3E-11 1.1E-15 116.8 19.0 190 134-332 34-269 (276)
103 4dgj_A Enteropeptidase catalyt 99.4 1.4E-11 4.9E-16 116.3 16.0 183 135-330 12-233 (235)
104 1zyo_A Serine protease; beta-b 99.3 4E-11 1.4E-15 109.6 17.5 160 135-326 15-185 (191)
105 4f4o_C Haptoglobin; globin fol 99.3 2E-11 6.9E-16 122.7 17.0 190 135-333 114-346 (347)
106 3cp7_A Alkaline serine proteas 99.3 2E-11 6.8E-16 114.7 15.8 178 135-331 6-215 (218)
107 2f91_A Hepatopancreas trypsin; 99.3 4.8E-11 1.6E-15 113.2 18.1 187 135-330 12-235 (237)
108 2f9n_A Alpha I tryptase; serin 99.3 2.2E-11 7.5E-16 116.0 15.8 188 135-332 12-242 (245)
109 1yc0_A Hepatocyte growth facto 99.3 4.8E-11 1.6E-15 116.3 18.4 185 135-334 47-276 (283)
110 2qy0_B Complement C1R subcompo 99.3 8.3E-12 2.8E-16 118.6 12.3 176 155-332 22-239 (242)
111 2bz6_H Blood coagulation facto 99.3 3.3E-11 1.1E-15 115.5 16.3 186 135-334 12-242 (254)
112 1fon_A Procarboxypeptidase A-S 99.3 1.2E-11 4.2E-16 117.4 13.1 186 134-332 9-238 (240)
113 1fiw_A Beta-acrosin heavy chai 99.3 1.4E-10 4.7E-15 113.6 20.8 191 135-333 12-250 (290)
114 2kjp_A Uncharacterized protein 99.3 1.9E-12 6.6E-17 104.5 6.2 71 391-463 1-72 (91)
115 1z8g_A Serine protease hepsin; 99.3 9.7E-11 3.3E-15 118.8 20.1 187 135-334 129-362 (372)
116 3i18_A LMO2051 protein; alpha- 99.3 1.2E-11 3.9E-16 101.7 10.6 72 390-463 6-78 (100)
117 2wph_S Coagulation factor IXA 99.3 2.4E-11 8.1E-16 115.0 14.2 180 135-331 12-232 (235)
118 2b9l_A Prophenoloxidase activa 99.3 4.2E-11 1.4E-15 122.4 16.2 197 133-334 140-385 (394)
119 2kl1_A YLBL protein; structure 99.3 1.1E-11 3.9E-16 100.6 9.5 72 390-463 4-76 (94)
120 3f1s_B Vitamin K-dependent pro 99.3 3E-11 1E-15 117.9 14.1 188 131-334 60-278 (283)
121 2i6v_A General secretion pathw 99.3 1.3E-11 4.4E-16 98.7 8.4 68 390-458 18-86 (87)
122 2vz5_A TAX1-binding protein 3; 99.2 2.1E-11 7.2E-16 106.3 9.5 97 358-461 34-135 (139)
123 2vnt_A Urokinase-type plasmino 99.2 6.8E-10 2.3E-14 107.4 21.0 192 134-334 34-271 (276)
124 2zpm_A Regulator of sigma E pr 99.2 2.7E-11 9.3E-16 97.4 8.5 69 392-461 5-73 (91)
125 3h5c_B Vitamin K-dependent pro 99.2 8.7E-11 3E-15 116.4 13.8 182 134-331 104-316 (317)
126 1elv_A Complement C1S componen 99.2 2.5E-10 8.4E-15 114.0 16.8 180 134-334 93-327 (333)
127 1zjk_A Mannan-binding lectin s 99.2 3.2E-10 1.1E-14 116.1 18.1 183 135-332 173-401 (403)
128 3id1_A Regulator of sigma E pr 99.2 4.6E-11 1.6E-15 97.1 9.2 70 394-463 5-76 (95)
129 1md8_A C1R complement serine p 99.2 8.3E-11 2.9E-15 117.3 12.7 176 155-332 111-328 (329)
130 3nxp_A Prethrombin-1; alloster 99.2 5.6E-11 1.9E-15 122.7 11.0 191 135-332 177-420 (424)
131 2eaq_A LIM domain only protein 99.2 2.6E-11 8.9E-16 97.3 6.6 60 390-450 27-89 (90)
132 1wh1_A KIAA1095 protein; PDZ d 99.2 1.7E-11 5.9E-16 104.7 5.1 89 361-463 31-120 (124)
133 1arb_A Achromobacter protease 99.2 1.5E-10 5.2E-15 112.0 12.3 151 133-308 20-213 (268)
134 1gpz_A Complement C1R componen 99.2 2.3E-10 7.7E-15 117.0 14.0 176 155-332 179-396 (399)
135 2xxl_A GRAM-positive specific 99.1 9.2E-10 3.2E-14 112.9 17.6 189 134-333 129-374 (408)
136 2fcf_A Multiple PDZ domain pro 99.1 1.2E-10 4.1E-15 95.8 8.1 84 358-448 12-98 (103)
137 2vsp_A PDZ domain-containing p 99.1 1.2E-10 4.1E-15 93.7 7.8 61 390-452 26-88 (91)
138 4dur_A Plasminogen, serine pro 99.1 2.1E-09 7.2E-14 118.5 19.7 186 135-333 573-790 (791)
139 2eeh_A PDZ domain-containing p 99.1 3.1E-10 1.1E-14 92.9 9.2 76 358-451 18-95 (100)
140 2pkt_A PDZ and LIM domain prot 99.1 8.6E-11 3E-15 94.5 5.2 61 390-452 26-88 (91)
141 3cyy_A Tight junction protein 99.1 2.2E-10 7.6E-15 92.1 7.5 66 391-458 23-91 (92)
142 2w4f_A Protein LAP4; structura 99.1 2.1E-10 7.2E-15 93.2 7.3 81 361-451 13-94 (97)
143 1qau_A Neuronal nitric oxide s 99.1 2.9E-10 9.8E-15 95.1 7.7 70 390-460 25-97 (112)
144 1uit_A Human discs large 5 pro 99.1 1.6E-11 5.3E-16 103.8 -0.1 91 358-455 11-106 (117)
145 2iwq_A Multiple PDZ domain pro 99.1 4.3E-10 1.5E-14 95.9 8.8 82 359-447 33-117 (123)
146 2f83_A Coagulation factor XI; 99.0 1.1E-09 3.7E-14 118.4 14.0 186 134-330 398-621 (625)
147 1vb7_A PDZ and LIM domain 2; P 99.0 2.7E-10 9.1E-15 92.3 6.5 75 361-452 15-91 (94)
148 2v90_A PDZ domain-containing p 99.0 1.4E-10 4.7E-15 94.2 4.7 61 390-452 29-91 (96)
149 2pa1_A PDZ and LIM domain prot 99.0 4.9E-10 1.7E-14 89.2 7.8 60 390-451 25-86 (87)
150 2xrc_A Human complement factor 99.0 2.5E-09 8.4E-14 114.3 15.3 185 134-333 332-557 (565)
151 1v5l_A PDZ and LIM domain 3; a 99.0 3.6E-10 1.2E-14 93.1 6.7 77 360-453 13-91 (103)
152 1x5q_A LAP4 protein; PDZ domai 99.0 1.4E-09 4.7E-14 90.6 10.2 81 361-452 25-107 (110)
153 1w9e_A Syntenin 1; cell adhesi 99.0 7.1E-10 2.4E-14 99.4 8.6 83 358-459 12-96 (166)
154 2rcz_A Tight junction protein 99.0 1.4E-10 4.9E-15 90.7 3.5 56 391-447 21-79 (81)
155 1wf7_A Enigma homologue protei 99.0 2.2E-10 7.5E-15 94.4 4.6 70 390-461 28-99 (103)
156 3hrz_D Complement factor B; se 99.0 8.1E-10 2.8E-14 121.6 10.6 190 135-334 468-734 (741)
157 3tsv_A Tight junction protein 99.0 9.3E-10 3.2E-14 93.9 8.5 61 390-451 50-113 (124)
158 1kwa_A Hcask/LIN-2 protein; PD 99.0 1.5E-09 5.2E-14 86.7 8.7 68 362-447 13-83 (88)
159 1rrk_A Complement factor B; BB 99.0 1.2E-09 4.2E-14 114.5 10.5 192 133-334 224-492 (497)
160 2uzc_A Human pdlim5, PDZ and L 99.0 9.1E-10 3.1E-14 87.8 7.2 59 390-450 26-86 (88)
161 2jil_A GRIP1 protein, glutamat 99.0 4.5E-10 1.5E-14 91.3 5.4 60 390-451 31-93 (97)
162 2he4_A Na(+)/H(+) exchange reg 99.0 1.1E-09 3.8E-14 87.7 7.2 58 390-448 27-86 (90)
163 2yub_A LIMK-2, LIM domain kina 99.0 2.8E-10 9.5E-15 96.3 3.6 64 389-454 42-109 (118)
164 3rle_A Golgi reassembly-stacki 98.9 4.9E-10 1.7E-14 104.5 5.5 89 360-461 93-183 (209)
165 1wi2_A Riken cDNA 2700099C19; 98.9 2.1E-09 7E-14 88.7 8.6 70 361-447 26-97 (104)
166 1ihj_A INAD; intermolecular di 98.9 1E-09 3.6E-14 89.3 6.6 59 390-450 36-97 (98)
167 2awx_A Synapse associated prot 98.9 1.5E-09 5.1E-14 89.6 7.5 70 390-461 32-104 (105)
168 2jxo_A Ezrin-radixin-moesin-bi 98.9 4.4E-10 1.5E-14 91.6 4.0 61 390-451 32-94 (98)
169 2hga_A Conserved protein MTH13 98.9 2.8E-09 9.7E-14 91.0 9.0 65 390-458 24-89 (125)
170 2q3g_A PDZ and LIM domain prot 98.9 1.9E-09 6.6E-14 86.1 7.5 60 390-451 26-87 (89)
171 1n7e_A AMPA receptor interacti 98.9 2.9E-09 9.9E-14 86.6 8.6 60 390-451 29-91 (97)
172 1b8q_A Protein (neuronal nitri 98.9 8.8E-10 3E-14 94.3 5.8 69 391-460 33-104 (127)
173 3khf_A Microtubule-associated 98.9 1.3E-09 4.4E-14 89.0 6.4 59 391-451 34-94 (99)
174 3bpu_A Membrane-associated gua 98.9 2.5E-09 8.4E-14 85.3 7.8 58 391-451 27-87 (88)
175 2jre_A C60-1 PDZ domain peptid 98.9 1.6E-09 5.6E-14 89.8 7.0 79 361-451 24-105 (108)
176 2eeg_A PDZ and LIM domain prot 98.9 2.2E-09 7.4E-14 86.8 7.5 60 390-451 31-92 (94)
177 4fgm_A Aminopeptidase N family 98.9 2.1E-09 7.3E-14 115.1 9.5 73 390-464 495-568 (597)
178 2e7k_A Maguk P55 subfamily mem 98.9 1.8E-09 6.1E-14 86.9 6.5 69 360-447 16-86 (91)
179 3ngh_A PDZ domain-containing p 98.9 1.5E-09 5.1E-14 89.8 6.2 60 390-451 25-86 (106)
180 2dls_A PDZ-rhogef, RHO guanine 98.9 2.4E-09 8.3E-14 86.4 7.3 55 391-447 29-85 (93)
181 1wha_A KIAA0147 protein, scrib 98.9 6.1E-09 2.1E-13 85.9 9.7 58 390-448 37-97 (105)
182 2d90_A PDZ domain containing p 98.9 9.3E-10 3.2E-14 90.4 4.6 63 390-453 29-93 (102)
183 2kv8_A RGS12, regulator of G-p 98.9 2.6E-09 9E-14 84.1 7.1 57 391-448 23-81 (83)
184 2opg_A Multiple PDZ domain pro 98.9 3.6E-09 1.2E-13 86.0 8.0 60 391-452 30-92 (98)
185 1rgw_A ZAsp protein; PDZ, cyph 98.9 2.2E-09 7.7E-14 84.8 6.6 59 390-450 24-84 (85)
186 3sfj_A TAX1-binding protein 3; 98.9 3.8E-09 1.3E-13 86.9 8.1 84 360-447 17-103 (104)
187 2yt7_A Amyloid beta A4 precurs 98.9 4.5E-09 1.5E-13 86.2 8.3 73 362-447 21-97 (101)
188 1uez_A KIAA1526 protein; PDZ d 98.9 1.5E-09 5.2E-14 88.9 5.4 74 361-451 20-94 (101)
189 2ego_A General receptor for ph 98.9 4.5E-09 1.5E-13 85.3 8.1 78 361-447 15-94 (96)
190 1uf1_A KIAA1526 protein; PDZ d 98.9 7E-10 2.4E-14 95.1 3.3 68 391-461 46-115 (128)
191 2o2t_A Multiple PDZ domain pro 98.9 7.6E-10 2.6E-14 93.3 3.5 61 390-452 48-112 (117)
192 1ueq_A Membrane associated gua 98.9 7.5E-09 2.6E-13 88.0 9.7 60 390-450 43-106 (123)
193 2i1n_A Discs, large homolog 3; 98.9 5.9E-09 2E-13 85.5 8.7 80 361-452 14-96 (102)
194 2edz_A PDZ domain-containing p 98.9 2.5E-10 8.6E-15 95.9 0.3 66 390-457 37-104 (114)
195 2i04_A Membrane-associated gua 98.9 4.6E-09 1.6E-13 83.1 7.6 58 390-447 24-85 (85)
196 2vsv_A Rhophilin-2; scaffold p 98.9 4E-09 1.4E-13 87.8 7.3 58 391-448 44-103 (109)
197 2vwr_A Ligand of NUMB protein 98.9 5.9E-09 2E-13 84.3 8.2 60 390-451 28-90 (95)
198 2jik_A Synaptojanin-2 binding 98.9 5.8E-09 2E-13 85.4 8.2 78 362-451 18-98 (101)
199 2ejy_A 55 kDa erythrocyte memb 98.9 4.5E-09 1.6E-13 85.6 7.4 56 391-447 36-94 (97)
200 2f5y_A Regulator of G-protein 98.9 5.6E-09 1.9E-13 83.8 7.7 59 391-451 24-84 (91)
201 4amh_A Disks large homolog 1; 98.8 5.9E-09 2E-13 86.3 8.0 59 390-450 31-92 (106)
202 2odp_A Complement C2; C3/C5 co 98.8 2.7E-09 9.3E-14 112.3 7.4 187 133-333 233-502 (509)
203 2fe5_A Presynaptic protein SAP 98.8 8.8E-09 3E-13 83.0 8.8 59 390-450 32-93 (94)
204 3r68_A Na(+)/H(+) exchange reg 98.8 4.4E-09 1.5E-13 85.0 7.0 60 391-451 29-90 (95)
205 1d5g_A Human phosphatase HPTP1 98.8 6.5E-09 2.2E-13 84.2 8.0 59 390-450 32-93 (96)
206 3kzd_A TIAM-1, T-lymphoma inva 98.8 1.1E-08 3.7E-13 82.6 9.0 70 361-447 19-90 (94)
207 1v5q_A GRIP1 homolog, glutamat 98.8 4.3E-09 1.5E-13 89.4 6.6 61 390-451 44-108 (122)
208 2kom_A Partitioning defective 98.8 6.5E-09 2.2E-13 88.2 7.7 60 390-450 57-120 (121)
209 2h2b_A Tight junction protein 98.8 5.1E-09 1.7E-13 86.6 6.9 61 389-451 37-98 (107)
210 2dmz_A INAD-like protein; PDZ 98.8 7E-09 2.4E-13 88.9 8.0 80 360-451 25-107 (129)
211 1uep_A Membrane associated gua 98.8 3.7E-09 1.3E-13 87.0 5.8 60 390-450 33-96 (103)
212 1um1_A KIAA1849 protein, RSGI 98.8 1E-09 3.5E-14 91.4 2.4 70 390-461 35-107 (110)
213 2koj_A Partitioning defective 98.8 8.9E-09 3E-13 85.8 7.8 61 390-451 38-102 (111)
214 2fne_A Multiple PDZ domain pro 98.8 8.9E-09 3E-13 86.9 7.7 61 390-452 52-115 (117)
215 3cbz_A Dishevelled-2; PDZ doma 98.8 6.1E-09 2.1E-13 86.5 6.6 61 390-451 32-97 (108)
216 1g9o_A NHE-RF; PDZ domain, com 98.8 8.5E-09 2.9E-13 82.6 7.1 60 391-451 27-88 (91)
217 2dm8_A INAD-like protein; PDZ 98.8 1E-08 3.4E-13 86.1 7.8 60 391-452 43-105 (116)
218 1x5n_A Harmonin; PDZ domain, u 98.8 1.4E-09 4.6E-14 91.3 2.3 82 361-460 26-110 (114)
219 1va8_A Maguk P55 subfamily mem 98.8 1.3E-08 4.5E-13 85.1 8.3 60 390-451 47-109 (113)
220 3rle_A Golgi reassembly-stacki 98.8 5.5E-09 1.9E-13 97.3 6.5 73 388-460 13-88 (209)
221 3qik_A Phosphatidylinositol 3, 98.8 5.4E-09 1.8E-13 85.1 5.6 58 390-447 38-99 (101)
222 2dlu_A INAD-like protein; PDZ 98.8 7.8E-09 2.7E-13 86.2 6.7 59 391-451 38-99 (111)
223 1q3o_A Shank1; PDZ, GKAP, pept 98.8 1E-08 3.5E-13 85.2 7.4 57 390-447 44-102 (109)
224 1vae_A Rhophilin 2, rhophilin, 98.8 5.1E-09 1.7E-13 87.5 5.5 57 391-447 36-94 (111)
225 2kjd_A Sodium/hydrogen exchang 98.8 7.7E-10 2.6E-14 94.7 0.5 68 391-459 33-104 (128)
226 2g5m_B Neurabin-2; spinophilin 98.8 2.9E-09 9.8E-14 89.1 3.9 69 390-460 34-105 (113)
227 1wif_A RSGI RUH-020, riken cDN 98.8 7.4E-09 2.5E-13 88.4 6.5 58 390-447 48-109 (126)
228 2djt_A Unnamed protein product 98.8 6.4E-09 2.2E-13 85.6 6.0 60 390-451 37-99 (104)
229 1whd_A RGS3, regulator of G-pr 98.8 9.1E-09 3.1E-13 84.2 6.8 56 391-447 36-93 (100)
230 1x6d_A Interleukin-16; PDZ dom 98.8 4E-09 1.4E-13 89.1 4.8 63 390-453 41-106 (119)
231 1nf3_C PAR-6B; semi-CRIB motif 98.8 1.8E-09 6E-14 92.7 2.6 82 362-451 42-126 (128)
232 2qkv_A Inactivation-NO-after-p 98.8 1.4E-08 4.8E-13 82.4 7.7 57 391-448 31-90 (96)
233 2byg_A Channel associated prot 98.8 1E-08 3.5E-13 86.5 7.1 60 390-451 53-115 (117)
234 1m5z_A GRIP, AMPA receptor int 98.8 8.9E-09 3.1E-13 82.5 6.4 57 390-447 31-89 (91)
235 2q9v_A Membrane-associated gua 98.8 7.9E-09 2.7E-13 82.6 6.1 58 390-447 26-87 (90)
236 2gzv_A PRKCA-binding protein; 98.8 1.7E-08 5.6E-13 84.8 8.3 73 359-447 33-108 (114)
237 2qg1_A Multiple PDZ domain pro 98.8 2E-08 6.9E-13 80.6 8.2 57 390-447 28-87 (92)
238 2r4h_A Membrane-associated gua 98.8 1.6E-08 5.4E-13 84.5 7.6 60 390-451 48-110 (112)
239 2yuy_A RHO GTPase activating p 98.7 4.8E-09 1.7E-13 89.6 4.4 60 390-451 60-121 (126)
240 1v62_A KIAA1719 protein; struc 98.7 9.1E-09 3.1E-13 86.7 5.8 59 391-451 42-103 (117)
241 2edp_A Fragment, shroom family 98.7 1.2E-08 4.2E-13 83.4 6.4 59 391-451 35-95 (100)
242 1wfv_A Membrane associated gua 98.7 9.2E-09 3.1E-13 84.4 5.5 60 390-451 35-97 (103)
243 4a8c_A Periplasmic PH-dependen 98.7 2.8E-08 9.6E-13 102.8 10.4 72 390-463 362-433 (436)
244 1uew_A Membrane associated gua 98.7 1E-08 3.5E-13 85.9 5.9 59 391-451 43-104 (114)
245 3axa_A Afadin, nectin-3, prote 98.7 1.8E-08 6.3E-13 83.1 7.3 60 390-451 37-99 (106)
246 2iwn_A Multiple PDZ domain pro 98.7 1.4E-08 4.9E-13 82.1 6.6 78 361-451 14-94 (97)
247 1mfg_A ERB-B2 interacting prot 98.7 3.1E-08 1.1E-12 80.0 8.6 77 362-447 13-91 (95)
248 2eno_A Synaptojanin-2-binding 98.7 2.7E-08 9.3E-13 84.1 8.5 78 362-451 28-108 (120)
249 1ujd_A KIAA0559 protein; PDZ d 98.7 1E-08 3.4E-13 86.4 5.7 60 390-451 48-110 (117)
250 1q7x_A PDZ2B domain of PTP-BAS 98.7 1.3E-08 4.6E-13 84.3 6.1 81 362-451 20-103 (108)
251 3qe1_A Sorting nexin-27, G pro 98.7 2E-08 6.9E-13 83.0 7.1 56 392-448 44-101 (107)
252 3mmg_A Nuclear inclusion prote 98.7 1E-06 3.4E-11 82.1 18.8 174 134-333 14-193 (241)
253 2iwo_A Multiple PDZ domain pro 98.7 6.9E-09 2.4E-13 87.9 4.0 61 390-452 52-115 (120)
254 1wfg_A Regulating synaptic mem 98.7 2E-08 6.9E-13 86.4 6.9 58 390-447 64-125 (131)
255 1wi4_A Synip, syntaxin binding 98.7 1.4E-08 4.7E-13 84.5 5.6 59 391-450 41-105 (109)
256 2kpk_A Membrane-associated gua 98.7 2.2E-08 7.4E-13 85.9 7.0 60 390-450 42-105 (129)
257 3o46_A Maguk P55 subfamily mem 98.7 2.4E-08 8.1E-13 80.4 6.9 57 390-447 27-86 (93)
258 3gsl_A Disks large homolog 4; 98.7 4.6E-08 1.6E-12 89.3 9.5 60 390-450 34-95 (196)
259 2db5_A INAD-like protein; PDZ 98.7 2.3E-08 7.8E-13 85.6 6.9 59 390-450 53-115 (128)
260 2d8i_A T-cell lymphoma invasio 98.7 1.7E-08 5.7E-13 84.8 5.9 68 363-447 30-99 (114)
261 1ujv_A Membrane associated gua 98.7 3.1E-08 1.1E-12 80.4 7.2 58 391-451 32-92 (96)
262 1y7n_A Amyloid beta A4 precurs 98.7 2.4E-08 8.2E-13 80.1 6.4 53 394-447 34-88 (90)
263 3b76_A E3 ubiquitin-protein li 98.7 3.7E-08 1.3E-12 83.1 7.9 57 390-447 52-111 (118)
264 1yph_C Chymotrypsin A, chain B 98.7 2.5E-07 8.6E-12 79.2 13.3 96 135-247 12-128 (131)
265 2edv_A FERM and PDZ domain-con 98.7 2.5E-08 8.5E-13 80.9 6.4 57 390-448 30-88 (96)
266 1n7t_A 99-MER peptide of densi 98.7 4.4E-08 1.5E-12 80.4 7.9 78 361-447 20-99 (103)
267 2daz_A INAD-like protein; PDZ 98.7 8.3E-09 2.8E-13 87.9 3.6 68 390-459 50-121 (124)
268 2d92_A INAD-like protein; PDZ 98.7 2E-08 6.9E-13 83.3 5.7 58 390-447 43-103 (108)
269 1qav_A Alpha-1 syntrophin (res 98.7 4.9E-08 1.7E-12 78.0 7.5 57 390-447 29-88 (90)
270 3hpk_A Protein interacting wit 98.7 7.2E-08 2.5E-12 82.0 9.0 60 390-450 44-106 (125)
271 1uhp_A Hypothetical protein KI 98.7 7.7E-08 2.6E-12 79.5 8.7 58 389-447 39-99 (107)
272 2la8_A Inactivation-NO-after-p 98.6 2.8E-08 9.7E-13 82.2 6.0 57 391-448 25-84 (106)
273 2eei_A PDZ domain-containing p 98.6 3.7E-08 1.3E-12 81.2 6.6 59 390-449 31-91 (106)
274 2dkr_A LIN-7 homolog B; LIN-7B 98.6 3.6E-08 1.2E-12 79.2 6.3 57 390-447 29-88 (93)
275 3i4w_A Disks large homolog 4; 98.6 3.8E-08 1.3E-12 80.8 6.5 56 391-447 35-93 (104)
276 3e17_A Tight junction protein 98.6 3.7E-08 1.3E-12 78.6 6.0 56 391-447 21-79 (88)
277 1wf8_A Neurabin-I; PDZ domain, 98.6 4.9E-08 1.7E-12 80.7 6.9 57 390-447 39-98 (107)
278 3k1r_A Harmonin; protein-prote 98.6 5.4E-08 1.8E-12 89.3 7.8 59 390-451 109-169 (192)
279 2cs5_A Tyrosine-protein phosph 98.6 1.7E-08 5.9E-13 85.1 4.1 60 391-451 41-107 (119)
280 3gsl_A Disks large homolog 4; 98.6 4E-08 1.4E-12 89.7 6.8 61 390-452 129-192 (196)
281 3pv2_A DEGQ; trypsin fold, PDZ 98.6 5.3E-08 1.8E-12 101.0 8.4 66 390-457 385-450 (451)
282 1fc6_A Photosystem II D1 prote 98.6 1E-07 3.5E-12 97.0 10.1 71 390-461 98-173 (388)
283 3l4f_D SH3 and multiple ankyri 98.6 6.2E-08 2.1E-12 83.4 7.2 57 390-447 64-122 (132)
284 1uju_A Scribble; PDZ domain, c 98.6 1.4E-08 4.9E-13 84.5 3.1 79 362-447 21-102 (111)
285 1p1d_A PDZ45, glutamate recept 98.6 7.6E-08 2.6E-12 88.4 8.2 61 390-451 35-99 (196)
286 4e34_A Golgi-associated PDZ an 98.6 8.4E-08 2.9E-12 76.0 7.1 57 390-447 27-86 (87)
287 1wg6_A Hypothetical protein (r 98.6 3E-08 1E-12 84.8 4.7 60 390-450 54-122 (127)
288 1tp5_A Presynaptic density pro 98.6 3.8E-08 1.3E-12 83.0 5.2 57 391-447 38-96 (119)
289 1v6b_A Harmonin isoform A1; st 98.6 2.3E-08 8E-13 84.3 3.8 61 391-451 43-109 (118)
290 2qt5_A Glutamate receptor-inte 98.6 3.8E-08 1.3E-12 90.7 5.6 59 390-450 32-93 (200)
291 2z17_A Pleckstrin homology SEC 98.6 3.7E-08 1.3E-12 81.0 4.9 75 362-445 27-103 (104)
292 2qbw_A PDZ-fibronectin fusion 98.6 2.8E-07 9.5E-12 84.4 10.7 70 389-460 22-95 (195)
293 2qt5_A Glutamate receptor-inte 98.6 6.9E-08 2.4E-12 88.9 6.5 61 390-452 134-197 (200)
294 3nfk_A Tyrosine-protein phosph 98.6 8.3E-08 2.8E-12 79.2 6.2 57 391-447 43-106 (107)
295 3r0h_A INAD, inactivation-NO-a 98.5 1.1E-07 3.7E-12 87.8 7.6 68 391-459 45-119 (206)
296 2ehr_A INAD-like protein; PDZ 98.5 9.1E-08 3.1E-12 80.4 6.4 58 390-448 49-109 (117)
297 1i16_A Interleukin 16, LCF; cy 98.5 6.3E-08 2.2E-12 83.1 5.6 58 390-447 56-116 (130)
298 2csj_A TJP2 protein; PDZ domai 98.5 7.8E-08 2.7E-12 80.8 5.9 59 390-451 45-105 (117)
299 1um7_A Synapse-associated prot 98.5 8.2E-08 2.8E-12 80.0 5.7 57 390-447 38-97 (113)
300 3tsz_A Tight junction protein 98.5 1.1E-07 3.7E-12 96.8 7.4 60 390-450 30-92 (391)
301 2pka_B Kallikrein A; serine pr 98.5 4.8E-07 1.6E-11 79.6 10.4 123 208-332 6-149 (152)
302 1p1d_A PDZ45, glutamate recept 98.5 1.3E-07 4.4E-12 86.9 7.0 59 390-450 134-195 (196)
303 3egg_C Spinophilin; PP1, serin 98.5 2.4E-07 8.2E-12 83.3 8.3 57 390-447 110-169 (170)
304 2dc2_A GOPC, golgi associated 98.5 2.3E-07 7.9E-12 76.1 7.2 57 391-448 35-94 (103)
305 1r6j_A Syntenin 1; PDZ, membra 98.5 2.2E-07 7.4E-12 73.1 6.2 52 395-447 27-80 (82)
306 1ufx_A KIAA1526 protein; PDZ d 98.5 9.9E-08 3.4E-12 78.5 4.0 56 392-447 33-95 (103)
307 2lob_A Golgi-associated PDZ an 97.8 2.2E-08 7.5E-13 83.7 0.0 55 391-446 53-110 (112)
308 2krg_A Na(+)/H(+) exchange reg 98.4 1.2E-08 4E-13 95.5 -2.9 67 391-459 33-104 (216)
309 3soe_A Membrane-associated gua 98.4 6.8E-07 2.3E-11 74.5 8.2 58 391-451 34-94 (113)
310 3shw_A Tight junction protein 98.4 3.8E-07 1.3E-11 94.3 7.3 60 390-450 22-84 (468)
311 3r0h_A INAD, inactivation-NO-a 98.3 5.9E-07 2E-11 82.8 6.2 57 391-448 136-195 (206)
312 3suz_A Amyloid beta A4 precurs 98.3 6E-07 2.1E-11 91.3 5.6 66 391-457 232-301 (388)
313 1ky9_A Protease DO, DEGP, HTRA 98.3 1.1E-07 3.7E-12 98.6 0.0 66 390-457 382-447 (448)
314 3k50_A Putative S41 protease; 98.2 5.1E-07 1.8E-11 92.0 4.4 57 392-451 91-147 (403)
315 1lvm_A Catalytic domain of the 98.2 7.6E-05 2.6E-09 69.1 17.7 171 134-329 22-200 (229)
316 1z87_A Alpha-1-syntrophin; pro 98.2 1.2E-06 4.2E-11 83.9 5.6 57 390-447 102-161 (263)
317 3gge_A PDZ domain-containing p 98.2 6.4E-06 2.2E-10 66.2 8.3 58 391-448 28-89 (95)
318 1k32_A Tricorn protease; prote 98.0 6.2E-06 2.1E-10 93.9 8.2 69 391-460 748-826 (1045)
319 4fln_A Protease DO-like 2, chl 98.0 2.2E-05 7.4E-10 82.7 9.9 91 363-455 375-477 (539)
320 1w9e_A Syntenin 1; cell adhesi 97.9 1.1E-06 3.9E-11 78.3 -0.5 34 394-427 110-143 (166)
321 2xkx_A Disks large homolog 4; 97.9 1.9E-05 6.5E-10 86.6 9.1 60 390-451 88-150 (721)
322 2xkx_A Disks large homolog 4; 97.7 4.7E-05 1.6E-09 83.4 7.6 57 390-447 330-389 (721)
323 3zve_A 3C protease; hydrolase, 97.5 0.0026 9E-08 57.6 15.5 155 134-319 11-173 (190)
324 3q3y_A HEVB EV93 3C protease; 97.5 0.0065 2.2E-07 54.5 17.6 159 132-319 11-175 (191)
325 4dcd_A Protease 3C, genome pol 97.5 0.0021 7E-08 58.0 14.3 157 134-319 18-180 (190)
326 3qzr_A 3C protein; chymotrypsi 97.5 0.0042 1.4E-07 55.8 16.2 161 130-319 11-177 (187)
327 2hal_A Hepatitis A protease 3C 97.4 0.0046 1.6E-07 57.1 15.8 176 128-320 3-204 (212)
328 1cqq_A Type 2 rhinovirus 3C pr 97.4 0.018 6.2E-07 51.6 18.7 157 133-319 10-173 (180)
329 2b0f_A Picornain 3C (protease 97.3 0.0053 1.8E-07 55.1 14.6 154 134-319 11-172 (182)
330 3suz_A Amyloid beta A4 precurs 97.1 7.9E-05 2.7E-09 75.6 0.0 53 394-447 318-372 (388)
331 2bhg_A Foot-and-mouth disease 97.0 0.0068 2.3E-07 55.8 12.4 160 156-328 31-205 (209)
332 2pka_A Kallikrein A; serine pr 96.9 0.0037 1.3E-07 48.0 8.0 34 135-177 12-45 (80)
333 2ijd_1 Picornain 3C, RNA-direc 96.4 0.13 4.5E-06 55.2 18.9 158 133-320 10-174 (644)
334 1yph_E Chymotrypsin A, chain C 95.9 0.013 4.5E-07 46.8 6.1 50 283-332 41-95 (97)
335 2ggv_B NS3, non-structural pro 94.4 1.2 4.1E-05 39.0 14.0 135 134-309 17-154 (185)
336 2fp7_B Serine protease NS3; fl 94.3 0.57 2E-05 40.6 11.7 133 134-307 3-138 (172)
337 4ash_A NS6 protease; hydrolase 93.6 2.5 8.5E-05 36.0 13.9 141 155-316 15-171 (185)
338 2yew_A Capsid protein, coat pr 93.5 0.088 3E-06 47.6 5.2 40 279-318 195-234 (253)
339 4agk_A Capsid protein, coat pr 93.5 0.17 6E-06 41.9 6.5 38 279-316 99-136 (158)
340 1vcp_A Semliki forest virus ca 93.3 0.2 6.7E-06 41.1 6.5 40 278-317 90-129 (149)
341 1wxr_A Haemoglobin protease; h 93.2 0.28 9.5E-06 54.7 9.7 80 155-247 56-145 (1048)
342 1svp_A Sindbis virus capsid pr 93.2 0.12 4.1E-06 43.0 5.1 39 279-317 100-138 (161)
343 1ep5_B Capsid protein C, coat 93.1 0.18 6.1E-06 41.8 6.1 40 278-317 97-136 (157)
344 1kxf_A Sindbis virus capsid pr 92.7 0.11 3.7E-06 47.4 4.7 39 279-317 205-243 (264)
345 3e90_B NS3 protease; trypsin-l 92.2 0.23 7.9E-06 43.9 6.0 135 133-308 21-158 (198)
346 3u1j_B Serine protease NS3; se 92.0 0.29 9.8E-06 43.1 6.3 135 133-308 26-163 (191)
347 2fom_B Polyprotein; flavivirus 92.0 0.23 7.7E-06 43.7 5.6 135 132-307 16-153 (185)
348 3lkw_A Fusion protein of nonst 91.3 0.33 1.1E-05 44.1 6.1 131 137-308 71-204 (236)
349 2fyq_A Chymotrypsin-like cyste 88.9 5.3 0.00018 34.2 11.1 144 155-318 26-184 (194)
350 3su6_A NS3 protease, NS4A prot 65.0 11 0.00037 33.1 5.7 42 283-324 154-197 (203)
351 3dor_A Protein CT_858, CPAF; m 60.8 9.3 0.00032 40.0 5.4 51 408-458 109-183 (583)
352 3s6n_G Small nuclear ribonucle 57.6 17 0.0006 27.0 5.2 34 186-219 14-47 (76)
353 1h64_1 SnRNP SM-like protein; 57.1 18 0.00061 26.8 5.1 34 186-219 14-47 (75)
354 1d3b_B Protein (small nuclear 56.4 17 0.00058 28.0 5.1 34 186-219 14-47 (91)
355 1i4k_A Putative snRNP SM-like 56.2 20 0.00067 26.6 5.3 34 186-219 14-47 (77)
356 1th7_A SnRNP-2, small nuclear 55.0 20 0.00068 27.0 5.2 33 187-219 20-52 (81)
357 4emk_B U6 snRNA-associated SM- 53.1 20 0.00068 26.6 4.8 33 186-218 14-46 (75)
358 1d3b_A Protein (small nuclear 53.0 24 0.00083 26.1 5.3 34 186-219 15-48 (75)
359 1mgq_A SM-like protein; LSM, R 52.3 23 0.0008 26.8 5.2 34 186-219 25-58 (83)
360 4emk_A U6 snRNA-associated SM- 52.0 23 0.00078 27.7 5.1 33 186-218 30-62 (94)
361 3s6n_F Small nuclear ribonucle 51.5 25 0.00086 26.9 5.3 33 186-218 16-48 (86)
362 4emg_A Probable U6 snRNA-assoc 51.0 24 0.00083 27.4 5.2 34 186-219 19-52 (93)
363 1ljo_A Archaeal SM-like protei 50.3 28 0.00097 25.8 5.3 34 186-219 15-49 (77)
364 4emk_C U6 snRNA-associated SM- 49.5 26 0.00088 28.4 5.3 34 186-219 33-66 (113)
365 1y96_A Gemin6, SIP2, GEM-assoc 49.0 38 0.0013 26.0 5.8 33 186-218 17-50 (86)
366 1i8f_A Putative snRNP SM-like 47.7 23 0.00078 26.7 4.4 33 187-219 22-54 (81)
367 3bw1_A SMX4 protein, U6 snRNA- 47.2 24 0.00081 27.6 4.6 33 186-218 20-52 (96)
368 1b34_B Protein (small nuclear 46.2 30 0.001 28.1 5.3 33 187-219 40-72 (118)
369 3by8_A Sensor protein DCUS; hi 44.1 22 0.00074 29.6 4.2 30 291-330 111-140 (142)
370 3pgw_B SM B; protein-RNA compl 43.2 25 0.00085 32.2 4.6 33 186-218 14-46 (231)
371 4emh_A Probable U6 snRNA-assoc 43.1 38 0.0013 27.0 5.3 33 186-218 26-58 (105)
372 1n9r_A SMF, small nuclear ribo 41.8 38 0.0013 26.3 4.9 34 186-219 31-65 (93)
373 1b34_A Protein (small nuclear 40.1 44 0.0015 27.2 5.3 61 186-248 12-73 (119)
374 1z8r_A Coxsackievirus B4 polyp 39.7 70 0.0024 27.5 6.6 39 276-317 113-151 (166)
375 2hrv_A 2A cysteine proteinase; 38.6 74 0.0025 26.7 6.4 39 276-317 93-131 (142)
376 4esy_A CBS domain containing m 35.1 21 0.00072 30.3 2.8 22 285-306 46-67 (170)
377 2fwk_A U6 snRNA-associated SM- 35.0 28 0.00095 28.5 3.3 32 187-218 39-70 (121)
378 2y9a_D Small nuclear ribonucle 34.8 64 0.0022 26.6 5.5 33 186-218 15-47 (126)
379 1m5q_A SMAP3, small nuclear ri 33.5 63 0.0021 26.8 5.3 34 186-219 10-43 (130)
380 2eqj_A Metal-response element- 32.0 1.4E+02 0.005 21.5 6.5 35 186-220 17-51 (66)
381 4hcz_A PHD finger protein 1; p 30.2 1.4E+02 0.0049 20.9 6.5 35 186-220 7-41 (58)
382 4a4f_A SurviVal of motor neuro 29.5 1.1E+02 0.0038 21.6 5.4 34 186-219 12-46 (64)
383 3k6e_A CBS domain protein; str 28.7 32 0.0011 28.9 2.8 22 285-306 45-66 (156)
384 3k6e_A CBS domain protein; str 25.3 36 0.0012 28.5 2.5 16 291-306 118-133 (156)
385 3nqr_A Magnesium and cobalt ef 24.6 39 0.0013 26.8 2.5 20 287-306 98-117 (127)
386 3s6n_E Small nuclear ribonucle 24.1 76 0.0026 24.5 3.9 32 188-219 28-63 (92)
387 1p0z_A Sensor kinase CITA; tra 23.8 50 0.0017 26.7 3.0 18 291-308 106-123 (131)
388 3gby_A Uncharacterized protein 23.7 42 0.0014 26.6 2.5 20 287-306 98-117 (128)
389 3lfr_A Putative metal ION tran 23.4 42 0.0014 27.1 2.5 20 287-306 99-118 (136)
390 3hf7_A Uncharacterized CBS-dom 22.8 44 0.0015 26.7 2.5 20 287-306 99-118 (130)
391 3i8n_A Uncharacterized protein 22.6 44 0.0015 26.6 2.5 20 287-306 101-120 (130)
392 3jtf_A Magnesium and cobalt ef 21.9 44 0.0015 26.6 2.3 20 287-306 98-117 (129)
393 2m0o_A PHD finger protein 1; t 21.2 1.3E+02 0.0043 22.5 4.3 34 187-220 31-64 (79)
394 3kpb_A Uncharacterized protein 21.1 51 0.0018 25.6 2.5 20 287-306 92-111 (122)
No 1
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=4.6e-51 Score=411.93 Aligned_cols=298 Identities=33% Similarity=0.553 Sum_probs=261.1
Q ss_pred hHHHHHHHhCCceEEEEcccccc----------ccc----------cCCceeEEEEEeCC-CeEEeccccccCCCCCCCC
Q 012318 126 TIANAAARVCPAVVNLSAPREFL----------GIL----------SGRGIGSGAIVDAD-GTILTCAHVVVDFHGSRAL 184 (466)
Q Consensus 126 ~~~~~~~~~~~SVV~I~~~~~~~----------~~~----------~~~~~GSGfiI~~~-G~ILT~aHvv~~~~~~~~~ 184 (466)
+++++++++.||||.|.+..... .++ ...+.||||+|+++ ||||||+||+.++
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~------ 87 (345)
T 3stj_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQA------ 87 (345)
T ss_dssp BSHHHHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTE------
T ss_pred CHHHHHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCC------
Confidence 58999999999999998764221 111 12478999999998 9999999999885
Q ss_pred CCceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecC
Q 012318 185 PKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRK 264 (466)
Q Consensus 185 ~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~ 264 (466)
..+.|.+.+|+.+++++++.|+.+||||||++.+..+++++++++..++.|++|+++|||.+...+++.|+|+...+.
T Consensus 88 --~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~aiG~p~g~~~~vt~G~Vs~~~~~ 165 (345)
T 3stj_A 88 --QKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRS 165 (345)
T ss_dssp --EEEEEECTTSCEEEEEEEEEETTTTEEEEEESSCCSCCCCCBCCGGGCCTTBEEEEEECGGGCSCEEEEEEEEEEEEC
T ss_pred --CEEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcccCCCceEeecCcccCCCCCEEEEEECCCCCCCcEEeeEEeeeccc
Confidence 689999999999999999999999999999987778999999988889999999999999999999999999988765
Q ss_pred ccCCCCCCccccEEEEcccCCCCCccceeecCCCeEEEEEEeEec---CCCeeeEEEeHHHHHHHHHHHHHcCCcccccc
Q 012318 265 SSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVA---AADGLSFAVPIDSAAKIIEQFKKNGWMHVEQK 341 (466)
Q Consensus 265 ~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~---~~~g~~~aip~~~i~~~l~~l~~~g~~~~~~~ 341 (466)
.. .. .....++++++.+++|+|||||||.+|+||||+++... ...+++|+||++.+++++++|+++|
T Consensus 166 ~~--~~-~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g------- 235 (345)
T 3stj_A 166 GL--NL-EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFG------- 235 (345)
T ss_dssp CS--SS-SSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHS-------
T ss_pred cc--CC-CCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhcc-------
Confidence 21 11 12356899999999999999999999999999998775 3457899999999999999999999
Q ss_pred ccccccccceeeeeeeeeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCE
Q 012318 342 VPLLWSTCKQVVILCRRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGK 421 (466)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~ 421 (466)
++.++|||+.+..+++++++.++.. ...|++|.+|.++|||+++||++||+|++|||+
T Consensus 236 ----------------~v~~~~lGv~~~~~~~~~a~~~gl~------~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~ 293 (345)
T 3stj_A 236 ----------------EIKRGLLGIKGTEMSADIAKAFNLD------VQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGK 293 (345)
T ss_dssp ----------------SCCCEECCEEEEECCHHHHHHTTCS------CCSSEEEEEECTTSHHHHHTCCTTCEECEETTE
T ss_pred ----------------cccccccceeeEeecHHHHHhcCCC------CCceEEEEEeccCChHHHcCCCCCCEEEEECCE
Confidence 7889999999999999999888653 357999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCCC
Q 012318 422 PVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEANP 464 (466)
Q Consensus 422 ~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~~ 464 (466)
+|.++.++..++.. ++|++++|+|.| +|+.+++++++.+.+.
T Consensus 294 ~v~~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~l~~~~~ 336 (345)
T 3stj_A 294 PLNSFAELRSRIATTEPGTKVKLGLLR-NGKPLEVEVTLDTSTS 336 (345)
T ss_dssp ECSCHHHHHHHHHTSCTTCEEEEEEEE-TTEEEEEEEECEEC--
T ss_pred ECCCHHHHHHHHHhcCCCCEEEEEEEE-CCEEEEEEEEEcccCC
Confidence 99999999999876 689999999999 8999999998876543
No 2
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=6.4e-49 Score=408.47 Aligned_cols=298 Identities=33% Similarity=0.557 Sum_probs=262.0
Q ss_pred hhHHHHHHHhCCceEEEEcccccc----------ccc----------cCCceeEEEEEeCC-CeEEeccccccCCCCCCC
Q 012318 125 DTIANAAARVCPAVVNLSAPREFL----------GIL----------SGRGIGSGAIVDAD-GTILTCAHVVVDFHGSRA 183 (466)
Q Consensus 125 ~~~~~~~~~~~~SVV~I~~~~~~~----------~~~----------~~~~~GSGfiI~~~-G~ILT~aHvv~~~~~~~~ 183 (466)
.+++++++++.||||.|.+..... .++ ...+.||||+|+++ ||||||+||+.++
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a----- 87 (436)
T 4a8c_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQA----- 87 (436)
T ss_pred CCHHHHHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCC-----
Confidence 359999999999999998754221 111 12578999999998 9999999999985
Q ss_pred CCCceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeec
Q 012318 184 LPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDR 263 (466)
Q Consensus 184 ~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~ 263 (466)
..+.|.+.+|+.++|++++.|+.+||||||++.+..+++++|+++..++.|++|+++|||.+...+++.|+|++..+
T Consensus 88 ---~~i~V~~~dg~~~~a~vv~~d~~~DlAllkv~~~~~l~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~r 164 (436)
T 4a8c_A 88 ---QKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGR 164 (436)
T ss_pred ---CEEEEEeCCCCEEEEEEEEEcCCCCEEEEEecCCCCCceEeccCcccCCCCCEEEEEEcCCCCCccEEEEEEeeecc
Confidence 68999999999999999999999999999998777899999998889999999999999999999999999998877
Q ss_pred CccCCCCCCccccEEEEcccCCCCCccceeecCCCeEEEEEEeEec---CCCeeeEEEeHHHHHHHHHHHHHcCCccccc
Q 012318 264 KSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVA---AADGLSFAVPIDSAAKIIEQFKKNGWMHVEQ 340 (466)
Q Consensus 264 ~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~---~~~g~~~aip~~~i~~~l~~l~~~g~~~~~~ 340 (466)
.. +.. .....++++|+.+++|+|||||||.+|+||||+++... ...+++|+||++.+++++++|+++|
T Consensus 165 ~~--~~~-~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g------ 235 (436)
T 4a8c_A 165 SG--LNL-EGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFG------ 235 (436)
T ss_pred cc--cCC-CCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhcc------
Confidence 52 111 22356899999999999999999999999999998765 3357899999999999999999999
Q ss_pred cccccccccceeeeeeeeeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECC
Q 012318 341 KVPLLWSTCKQVVILCRRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDG 420 (466)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing 420 (466)
++.++|||+.+..+++++++.++.. ...|++|.+|.++|||+++||++||+|++|||
T Consensus 236 -----------------~v~r~~lGv~~~~~~~~~a~~~gl~------~~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG 292 (436)
T 4a8c_A 236 -----------------EIKRGLLGIKGTEMSADIAKAFNLD------VQRGAFVSEVLPGSGSAKAGVKAGDIITSLNG 292 (436)
T ss_pred -----------------ccccccCceEecccCHHHHHHhCCC------CCcceEEEEECCCChHHHCCCCCCCEEEEECC
Confidence 8889999999999999998888653 35799999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCC
Q 012318 421 KPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEAN 463 (466)
Q Consensus 421 ~~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 463 (466)
++|.+++++..++.. .+|++++|+|.| +|+.+++++++...+
T Consensus 293 ~~v~~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~l~~~~ 335 (436)
T 4a8c_A 293 KPLNSFAELRSRIATTEPGTKVKLGLLR-NGKPLEVEVTLDTST 335 (436)
T ss_pred EECCCHHHHHHHHHhcCCCCEEEEEEEE-CCEEEEEEEEECCCC
Confidence 999999999988875 678999999999 899999988876544
No 3
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=5.4e-49 Score=394.36 Aligned_cols=307 Identities=43% Similarity=0.667 Sum_probs=250.0
Q ss_pred hhHHHHHHHhCCceEEEEcccc--ccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEE
Q 012318 125 DTIANAAARVCPAVVNLSAPRE--FLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGT 202 (466)
Q Consensus 125 ~~~~~~~~~~~~SVV~I~~~~~--~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~ 202 (466)
..+.++++++.+|||+|..... +.+.......||||+|+++||||||+||+.+. ..+.|.+.+|+.++++
T Consensus 15 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~--------~~i~V~~~~g~~~~a~ 86 (325)
T 1lcy_A 15 NFIADVVEKTAPAVVYIEILDRHPFLGREVPISNGSGFVVAADGLIVTNAHVVADR--------RRVRVRLLSGDTYEAV 86 (325)
T ss_dssp CHHHHHHHHHGGGEEEEEEEEEETTTTEEEEEEEEEEEEEETTTEEEECHHHHTTC--------SEEEEECTTSCEEEEE
T ss_pred hHHHHHHHHhCCcEEEEEEEecCccCCCccccccEEEEEEeCCCEEEECHHHcCCC--------CEEEEEeCCCCEEEEE
Confidence 4589999999999999986432 11111224789999999999999999999875 5799999999999999
Q ss_pred EEEecCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcc
Q 012318 203 VLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDC 282 (466)
Q Consensus 203 vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~ 282 (466)
++.+|+.+|||||+++.+..+++++|+++..++.|++|+++|||.+...+++.|+|+...+....++.......++++++
T Consensus 87 v~~~d~~~DlAllkl~~~~~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~v~~G~vs~~~~~~~~~g~~~~~~~~i~~d~ 166 (325)
T 1lcy_A 87 VTAVDPVADIATLRIQTKEPLPTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDLGLPQTNVEYIQTDA 166 (325)
T ss_dssp EEEEETTTTEEEEECCCSSCCCCCCBCCGGGCCTTCEEEECCCTTSSSSCCEEEEBCSCSCC---------CCCCEEESS
T ss_pred EEEECCCCCEEEEEEcCCCCCceEEecccccCCCCCEEEEEECCCCCCCcEEeEEEecccccccccCCCCCCCCEEEEcC
Confidence 99999999999999997777899999887778999999999999998889999999877654322222222346799999
Q ss_pred cCCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHHcCCccccccccccccccceeeeeeeeeecc
Q 012318 283 AINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKKNGWMHVEQKVPLLWSTCKQVVILCRRVVRP 362 (466)
Q Consensus 283 ~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (466)
.+|+|+|||||||.+|+||||+++... .+++|+||++.++++++++++++.. .-...+.++
T Consensus 167 ~~~~G~SGGPl~~~~G~vVGI~s~~~~--~g~~~aip~~~i~~~l~~~~~~~~~-----------------~g~~~~~r~ 227 (325)
T 1lcy_A 167 AIDFGNAGGPLVNLDGEVIGVNTMKVT--AGISFAIPSDRLREFLHRGEKKNSS-----------------SGISGSQRR 227 (325)
T ss_dssp CCSTTTTTSEEEETTSCEEEEEEEEEE--TTEEEEEEHHHHHHHTCC--------------------------------E
T ss_pred CCCCCCccccEECCCCEEEEEEeEeec--CCeeEEEEHHHHHHHHHHhhhcccc-----------------ccccccccc
Confidence 999999999999999999999999763 4689999999999999998775300 000156789
Q ss_pred cccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhcCCCCeEE
Q 012318 363 WLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLK 442 (466)
Q Consensus 363 ~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~ 442 (466)
|||+.+..++++..++++.....+++...|++|.+|.++|||+++||++||+|++|||++|.+++++.+++.. ++++.
T Consensus 228 ~lGv~~~~l~~~~~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~l~~~l~~--~~~v~ 305 (325)
T 1lcy_A 228 YIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRT--QSQLA 305 (325)
T ss_dssp ECCEEEEECCHHHHHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHTT--CSSEE
T ss_pred ccceEeecCCHHHHHhhCccccccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHhC--CCeEE
Confidence 9999999999999988877655555566899999999999999999999999999999999999999998875 57899
Q ss_pred EEEEECCCeEEEEEEEecC
Q 012318 443 VVVQRANDQLVTLTVIPEE 461 (466)
Q Consensus 443 l~v~R~~g~~~~l~v~~~~ 461 (466)
|+|.| +|+.+++++++..
T Consensus 306 l~v~R-~g~~~~~~v~~~~ 323 (325)
T 1lcy_A 306 VQIRR-GRETLTLYVTPEV 323 (325)
T ss_dssp EEEEE-TTEEEEEEECCEE
T ss_pred EEEEE-CCEEEEEEEEEec
Confidence 99999 8999999888753
No 4
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.5e-48 Score=394.76 Aligned_cols=298 Identities=32% Similarity=0.521 Sum_probs=255.3
Q ss_pred CchhHHHHHHHhCCceEEEEccccccccc------cCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCC
Q 012318 123 GRDTIANAAARVCPAVVNLSAPREFLGIL------SGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG 196 (466)
Q Consensus 123 ~~~~~~~~~~~~~~SVV~I~~~~~~~~~~------~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g 196 (466)
.+....++++++.+|||.|.......+.+ ...+.||||+|+++||||||+||+.+. ..+.|.+.++
T Consensus 15 ~e~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~g~GSG~iI~~~G~IlT~aHvv~~~--------~~i~V~~~~g 86 (348)
T 3qo6_A 15 DELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGA--------SDLRVTLADQ 86 (348)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEEEEEECSSSCCEEEEEEEEEEEEEEETTTEEEECHHHHTTC--------SEEEEECTTS
T ss_pred chhHHHHHHHHhCCCEEEEEEEeecccccccccccccCceEEEEEEeCCCEEEECHHHhCCC--------cEEEEEECCC
Confidence 45668899999999999999765332222 124679999999999999999999875 6899999999
Q ss_pred cEEEEEEEEecCCCCEEEEEeCCC-CCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccc
Q 012318 197 RTFEGTVLNADFHSDIAIVKINSK-TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRR 275 (466)
Q Consensus 197 ~~~~a~vv~~d~~~DlAlLkv~~~-~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~ 275 (466)
+.++++++..|+.+||||||++.+ ..+++++|+++..++.|+.|+++|||.+...+++.|.++...+..+....+....
T Consensus 87 ~~~~a~~v~~d~~~DlAlLkl~~~~~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~ 166 (348)
T 3qo6_A 87 TTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQ 166 (348)
T ss_dssp CEEEEEEEEEEGGGTEEEEECCCCGGGCCCCCBCCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECCSSSSSCEE
T ss_pred CEEEEEEEEEcCcCCEEEEEEcCCCCCceeEEecCcccCCCCCEEEEEECCCCCCCcEeEEEEEeeccccccccCCCccc
Confidence 999999999999999999999975 3688999988888999999999999999889999999998877655433334445
Q ss_pred cEEEEcccCCCCCccceeecCCCeEEEEEEeEecC---CCeeeEEEeHHHHHHHHHHHHHcCCcccccccccccccccee
Q 012318 276 EYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAA---ADGLSFAVPIDSAAKIIEQFKKNGWMHVEQKVPLLWSTCKQV 352 (466)
Q Consensus 276 ~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~---~~g~~~aip~~~i~~~l~~l~~~g~~~~~~~~~~~~~~~~~~ 352 (466)
.++++++.+|+|+|||||||.+|+||||+++.... ..+++|+||++.+++++++++++|
T Consensus 167 ~~i~~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g------------------ 228 (348)
T 3qo6_A 167 DVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFG------------------ 228 (348)
T ss_dssp EEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHS------------------
T ss_pred CEEEEeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCC------------------
Confidence 78999999999999999999999999999998753 467999999999999999999999
Q ss_pred eeeeeeeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCC-----------CCEEEEECCE
Q 012318 353 VILCRRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLP-----------SDVVIKFDGK 421 (466)
Q Consensus 353 ~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~ 421 (466)
++.+||||+.+.... ..+++ . ..|++|.+|.++|||+++||++ ||+|++|||+
T Consensus 229 -----~~~~~~lGi~~~~~~--~~~~~--------~-~~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~ 292 (348)
T 3qo6_A 229 -----KVTRPILGIKFAPDQ--SVEQL--------G-VSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGT 292 (348)
T ss_dssp -----SCCCEECCCEECCTT--TTTTT--------T-CSSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTB
T ss_pred -----ceeeeecCcEEccch--hhhhc--------C-CceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCE
Confidence 888999999986421 11111 1 2799999999999999999999 9999999999
Q ss_pred ecCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCC
Q 012318 422 PVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEAN 463 (466)
Q Consensus 422 ~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 463 (466)
+|.+++++..+|.. ++|++++|+|+| +|+.+++++++.+.+
T Consensus 293 ~v~~~~dl~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~l~~~~ 334 (348)
T 3qo6_A 293 KVSNGSDLYRILDQCKVGDEVTVEVLR-GDHKEKISVTLEPKP 334 (348)
T ss_dssp CCSSSHHHHHHHTTCCTTCEEEEEEEC-SSSEEEEEEECEECC
T ss_pred EeCCHHHHHHHHHhCCCcCEEEEEEEE-CCEEEEEEEEEccCC
Confidence 99999999999965 689999999999 899989888886554
No 5
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=8.6e-49 Score=391.89 Aligned_cols=298 Identities=35% Similarity=0.544 Sum_probs=255.3
Q ss_pred hhHHHHHHHhCCceEEEEccccccc---cccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEE
Q 012318 125 DTIANAAARVCPAVVNLSAPREFLG---ILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEG 201 (466)
Q Consensus 125 ~~~~~~~~~~~~SVV~I~~~~~~~~---~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a 201 (466)
.++.++++++.+|||+|.+...... .......||||+|+++||||||+||+.+. ..+.|.+.+|+.+++
T Consensus 9 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~--------~~i~V~~~~g~~~~a 80 (318)
T 1te0_A 9 ASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDA--------DQIIVALQDGRVFEA 80 (318)
T ss_dssp CCCHHHHHHHGGGEEEEEEEEECSSSSCCEEEEEEEEEEECSTTCEEEEEHHHHTTC--------SEEEEECTTSCEEEE
T ss_pred ccHHHHHHhcCCcEEEEEeEeccCCcccccccCccEEEEEEeCCCEEEECHHHcCCC--------CEEEEEeCCCCEEEE
Confidence 3488999999999999998653211 11234789999999999999999999875 578999999999999
Q ss_pred EEEEecCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEc
Q 012318 202 TVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTD 281 (466)
Q Consensus 202 ~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~ 281 (466)
+++.+|+.+|||||+++.+..++++.|+++..++.|++|+++|||.+....++.|+|+...+.... ......+++++
T Consensus 81 ~v~~~d~~~DlAllk~~~~~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~---~~~~~~~i~~d 157 (318)
T 1te0_A 81 LLVGSDSLTDLAVLIIKATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN---PTGRQNFLQTD 157 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCCCCCCCCTTCCCCTTCEEEEECCCSSSSCCEEEEEEEECCCCCCC---TTCSCCSEEES
T ss_pred EEEEeCCCceEEEEEEeCCCCCceEEeeCccCCCCCCEEEEEEcCCCCCCcEEeeEEecccccccC---CCCcCCEEEEC
Confidence 999999999999999997667899999877788999999999999998889999999887654211 11234578999
Q ss_pred ccCCCCCccceeecCCCeEEEEEEeEecC------CCeeeEEEeHHHHHHHHHHHHHcCCccccccccccccccceeeee
Q 012318 282 CAINAGNSGGPLVNIDGEIVGINIMKVAA------ADGLSFAVPIDSAAKIIEQFKKNGWMHVEQKVPLLWSTCKQVVIL 355 (466)
Q Consensus 282 ~~i~~G~SGGPlvd~~G~VVGI~~~~~~~------~~g~~~aip~~~i~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 355 (466)
+.+++|+|||||||.+|+||||+++.... ..+++|+||++.+++++++|+++|
T Consensus 158 ~~~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g--------------------- 216 (318)
T 1te0_A 158 ASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDG--------------------- 216 (318)
T ss_dssp SCCCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHS---------------------
T ss_pred CCCCCCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcC---------------------
Confidence 99999999999999999999999987652 357899999999999999999999
Q ss_pred eeeeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhc
Q 012318 356 CRRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD 435 (466)
Q Consensus 356 ~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~ 435 (466)
++.++|||+.+..+++..++.++. ....|++|.+|.++|||+++||++||+|++|||+++.++.++..++..
T Consensus 217 --~~~~~~lGi~~~~~~~~~~~~~g~------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l~~~l~~ 288 (318)
T 1te0_A 217 --RVIRGYIGIGGREIAPLHAQGGGI------DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAE 288 (318)
T ss_dssp --SCCCEECCEEEEECSCCCSSSSCS------SSCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHHHHHHHT
T ss_pred --CcccccceeEeeecchhHHHhccC------CCCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHHh
Confidence 778999999999887654443332 235799999999999999999999999999999999999999999986
Q ss_pred -CCCCeEEEEEEECCCeEEEEEEEecCCC
Q 012318 436 -RVGEPLKVVVQRANDQLVTLTVIPEEAN 463 (466)
Q Consensus 436 -~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 463 (466)
++|++++|+|+| +|+.+++++++.+.+
T Consensus 289 ~~~g~~v~l~v~R-~g~~~~~~v~~~~~~ 316 (318)
T 1te0_A 289 IRPGSVIPVVVMR-DDKQLTLQVTIQEYP 316 (318)
T ss_dssp SCTTCEEEEEEES-SSCEEEEEEECEECC
T ss_pred cCCCCEEEEEEEE-CCEEEEEEEEEccCC
Confidence 789999999999 899999999887654
No 6
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=3.2e-48 Score=404.30 Aligned_cols=296 Identities=33% Similarity=0.560 Sum_probs=251.8
Q ss_pred hhHHHHHHHhCCceEEEEccccc---------------c-ccc------------cCCceeEEEEEeCC-CeEEeccccc
Q 012318 125 DTIANAAARVCPAVVNLSAPREF---------------L-GIL------------SGRGIGSGAIVDAD-GTILTCAHVV 175 (466)
Q Consensus 125 ~~~~~~~~~~~~SVV~I~~~~~~---------------~-~~~------------~~~~~GSGfiI~~~-G~ILT~aHvv 175 (466)
.+++++++++.||||.|.+.... + .++ ...+.||||+|+++ ||||||+|||
T Consensus 19 ~~~~~~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~HVv 98 (451)
T 3pv2_A 19 PSMAPVLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDHVI 98 (451)
T ss_dssp CCSHHHHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHHHH
T ss_pred CCHHHHHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChHHh
Confidence 45899999999999999875310 1 111 12357999999985 9999999999
Q ss_pred cCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCC-----
Q 012318 176 VDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQ----- 250 (466)
Q Consensus 176 ~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~----- 250 (466)
.++ ..+.|.+.+++.++|++++.|+.+||||||++. ..++++.|+++..++.|++|+++|||.+..
T Consensus 99 ~~a--------~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~-~~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~ 169 (451)
T 3pv2_A 99 RNA--------SLITVTLQDGRRLKARLIGGDSETDLAVLKIDA-KNLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNS 169 (451)
T ss_dssp TTE--------EEEEEECTTSCEEECEEEEEETTTTEEEEECCC-SSCCCCCBCCGGGCCTTCEEEEEECCCCC-----C
T ss_pred CCC--------CEEEEEEcCCCEEEEEEEecCcCCcEEEEEEcC-cCCceeEecCcccCCCCCEEEEEECCCCccccccC
Confidence 985 689999999999999999999999999999974 678999999888899999999999999987
Q ss_pred CceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccceeecCCCeEEEEEEeEec---CCCeeeEEEeHHHHHHHH
Q 012318 251 NTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVA---AADGLSFAVPIDSAAKII 327 (466)
Q Consensus 251 ~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~---~~~g~~~aip~~~i~~~l 327 (466)
.+++.|+|+...+.... . .....++++|+.+++|+|||||||.+|+||||+++... ...+++|+||++.+++++
T Consensus 170 ~~vt~Givs~~~r~~~~--~-~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~ 246 (451)
T 3pv2_A 170 QSATFGIVSALKRSDLN--I-EGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVA 246 (451)
T ss_dssp CEEEEEEEEEEC-------------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHH
T ss_pred CceeEEEEeeccccccC--C-CCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHH
Confidence 89999999988765211 1 12346799999999999999999999999999998765 345799999999999999
Q ss_pred HHHHHcCCccccccccccccccceeeeeeeeeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhC
Q 012318 328 EQFKKNGWMHVEQKVPLLWSTCKQVVILCRRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLA 407 (466)
Q Consensus 328 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~a 407 (466)
++|+++| ++.++|||+.+.++++++++.++.. ....|++|.+|.++|||+++
T Consensus 247 ~~l~~~g-----------------------~v~r~~lGv~~~~~~~~~a~~~gl~-----~~~~G~~V~~V~~~spA~~a 298 (451)
T 3pv2_A 247 QQIIKFG-----------------------SIHRGLMGIFVQHLTPELAQAMGYP-----EDFQGALVSQVNPNSPAELA 298 (451)
T ss_dssp HHHHHHS-----------------------SCCCCBCCEEEEECCHHHHHHTTSC-----TTCCCEEEEEECTTSHHHHH
T ss_pred HHHHhcC-----------------------CcccccccceEEeccHHHHHhcCCC-----cCCceEEEEecCCCChHHHc
Confidence 9999999 8889999999999999999888653 22279999999999999999
Q ss_pred CCCCCCEEEEECCEecCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecC
Q 012318 408 GFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEE 461 (466)
Q Consensus 408 Gl~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~ 461 (466)
||++||+|++|||++|.+++++..++.. .+|++++|+|.| +|+.+++++++.+
T Consensus 299 GL~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R-~g~~~~~~v~l~~ 352 (451)
T 3pv2_A 299 GLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVER-DNKPLTLSAVVTD 352 (451)
T ss_dssp TCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEE-TTEEEEEEEECBC
T ss_pred CCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEE-CCEEEEEEEEEcc
Confidence 9999999999999999999999998876 789999999999 8999998888754
No 7
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=3.6e-49 Score=396.88 Aligned_cols=306 Identities=41% Similarity=0.678 Sum_probs=160.2
Q ss_pred CchhHHHHHHHhCCceEEEEcccc--ccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEE
Q 012318 123 GRDTIANAAARVCPAVVNLSAPRE--FLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFE 200 (466)
Q Consensus 123 ~~~~~~~~~~~~~~SVV~I~~~~~--~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~ 200 (466)
....+.++++++.+|||+|..... +.+.....+.||||+|+++||||||+||+.+. ..+.|.+.+++.++
T Consensus 12 ~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~--------~~i~V~~~~g~~~~ 83 (332)
T 3num_A 12 KYNFIADVVEKIAPAVVHIELFRKLPFSKREVPVASGSGFIVSEDGLIVTNAHVVTNK--------HRVKVELKNGATYE 83 (332)
T ss_dssp HHCHHHHHHHHHGGGEEEEEEEEECTTSSCEEEEEEEEEEEEETTTEEEECTTTCCTT--------SEEEEEETTSCEEE
T ss_pred ccchHHHHHHHhcCcEEEEEEEeccccCCCcceeeeEEEEEEeCCCEEEEChHHcCCC--------CEEEEEECCCCEEE
Confidence 446789999999999999997542 22222335789999999999999999999874 68999999999999
Q ss_pred EEEEEecCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEE
Q 012318 201 GTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQT 280 (466)
Q Consensus 201 a~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~ 280 (466)
++++..|+.+|||||+++.+..++++.++++..++.|+.|+++|||.+...+++.|.++...+.............++++
T Consensus 84 a~~~~~d~~~DlAlL~l~~~~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~ 163 (332)
T 3num_A 84 AKIKDVDEKADIALIKIDHQGKLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQT 163 (332)
T ss_dssp EEEEEEETTTTEEEEEECCSSCCCCCCBCCTTSCCTTCEEEEECC-----CCEEEEEEEEC--------------CCEEE
T ss_pred EEEEEecCCCCeEEEEEcCCCCCceeeecCcccCCCCCEEEEEECCCCCCcceeeeEEEeecccccccCcCCCcCCEEEE
Confidence 99999999999999999987778999998878899999999999999998999999998876654333333334567899
Q ss_pred cccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHH---cCCccccccccccccccceeeeeee
Q 012318 281 DCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK---NGWMHVEQKVPLLWSTCKQVVILCR 357 (466)
Q Consensus 281 ~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 357 (466)
++.+++|+|||||||.+|+||||+++... .+++|+||++.++++++++++ .| ..
T Consensus 164 d~~i~~G~SGGPlv~~~G~vvGI~s~~~~--~g~~~aip~~~i~~~l~~~~~~~~~g---------------------~~ 220 (332)
T 3num_A 164 DAIINYGNAGGPLVNLDGEVIGINTLKVT--AGISFAIPSDKIKKFLTESHDRQAKG---------------------KA 220 (332)
T ss_dssp SSCCCTTTTTSEEEETTSCEEEEEEEEEE--TTEEEEEEHHHHHHHHHHHCC----------------------------
T ss_pred ECCcCCCCcHHHhhCCCCcEEEEEeeEec--ccceEEECHHHHHHHHHHHhhhhccC---------------------cc
Confidence 99999999999999999999999998764 579999999999999999853 22 00
Q ss_pred eeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhcCC
Q 012318 358 RVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRV 437 (466)
Q Consensus 358 ~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~ 437 (466)
.+.++|||+.+..++++..++++.....++....|++|.+|.++|||+++||++||+|++|||++|.+++++..++..
T Consensus 221 ~~~r~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-- 298 (332)
T 3num_A 221 ITKKKYIGIRMMSLTSSKAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVIKR-- 298 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccceEEEecCHHHhhhhhhhccccCCCCCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHHHHHhC--
Confidence 356899999999998888777765545555566899999999999999999999999999999999999999988864
Q ss_pred CCeEEEEEEECCCeEEEEEEEecCC
Q 012318 438 GEPLKVVVQRANDQLVTLTVIPEEA 462 (466)
Q Consensus 438 g~~v~l~v~R~~g~~~~l~v~~~~~ 462 (466)
|++++|+|.| +|+.+++++++..+
T Consensus 299 ~~~v~l~v~R-~g~~~~~~v~p~~~ 322 (332)
T 3num_A 299 ESTLNMVVRR-GNEDIMITVIPEEI 322 (332)
T ss_dssp -------------------------
T ss_pred CCeEEEEEEE-CCEEEEEEEEEeee
Confidence 7889999999 89999999988654
No 8
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=1.9e-46 Score=375.83 Aligned_cols=295 Identities=35% Similarity=0.489 Sum_probs=244.0
Q ss_pred hhHHHHHHHhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCC-CCCCCceEEEEeCCCcEEEEEE
Q 012318 125 DTIANAAARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGS-RALPKGKVDVTLQDGRTFEGTV 203 (466)
Q Consensus 125 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~-~~~~~~~i~V~~~~g~~~~a~v 203 (466)
.++.++++++.||||+|..... .....||||+|+++||||||+||+.+.... .......+.|.+.+++.+++++
T Consensus 6 ~~~~~~~~~~~~svV~I~~~~~-----~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~g~~~~a~v 80 (324)
T 1y8t_A 6 GSVEQVAAKVVPSVVMLETDLG-----RQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTV 80 (324)
T ss_dssp CCHHHHHHHHGGGEEEEEEEC---------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETTCCEECEEE
T ss_pred ccHHHHHHHhcCcEEEEEEEcc-----CCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCCCCEEEEEE
Confidence 4589999999999999987542 234789999999888999999999864200 0001137899999999999999
Q ss_pred EEecCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCC---CCCCccccEEEE
Q 012318 204 LNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDL---GLGGMRREYLQT 280 (466)
Q Consensus 204 v~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~---~~~~~~~~~i~~ 280 (466)
+.+|+.+|||||+++.+..++++.|+++..++.|++|+++|||.+...+++.|+++...+..... +.......++++
T Consensus 81 v~~d~~~DlAllkl~~~~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~G~vs~~~~~~~~~~~~g~~~~~~~~i~~ 160 (324)
T 1y8t_A 81 VGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQT 160 (324)
T ss_dssp EECCTTTTEEEEEECSCCSCCCCEECCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECC-------CCCEEEEEE
T ss_pred EEeCCCCCEEEEEECCCCCCceEEecCcccCCCCCEEEEEEcCCCCCCcEeeeEEeecccccccccccCcccccCCEEEE
Confidence 99999999999999976788999998877789999999999999988889999998776532211 111123568999
Q ss_pred cccCCCCCccceeecCCCeEEEEEEeEecC----------CCeeeEEEeHHHHHHHHHHHHHcCCccccccccccccccc
Q 012318 281 DCAINAGNSGGPLVNIDGEIVGINIMKVAA----------ADGLSFAVPIDSAAKIIEQFKKNGWMHVEQKVPLLWSTCK 350 (466)
Q Consensus 281 ~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~----------~~g~~~aip~~~i~~~l~~l~~~g~~~~~~~~~~~~~~~~ 350 (466)
++.+|+|+|||||||.+|+||||+++.... ..+++|+||++.+++++++|+++|
T Consensus 161 d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g---------------- 224 (324)
T 1y8t_A 161 DAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTG---------------- 224 (324)
T ss_dssp CSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHS----------------
T ss_pred cCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcC----------------
Confidence 999999999999999999999999987542 246899999999999999999999
Q ss_pred eeeeeeeeeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHH
Q 012318 351 QVVILCRRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEII 430 (466)
Q Consensus 351 ~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~ 430 (466)
++.++|||+.+... ....|++|.+|.++|||+++|||+||+|++|||+++.++.++.
T Consensus 225 -------~~~~~~lGi~~~~~----------------~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~ 281 (324)
T 1y8t_A 225 -------KASHASLGVQVTND----------------KDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALV 281 (324)
T ss_dssp -------CCCCEECCEEEESC----------------SSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHH
T ss_pred -------CccccccceEeeec----------------cCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHH
Confidence 77889999998642 1247899999999999999999999999999999999999999
Q ss_pred HHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCC
Q 012318 431 EIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEAN 463 (466)
Q Consensus 431 ~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 463 (466)
.++.. .+|++++|+|+|.+|+.+++++++...+
T Consensus 282 ~~l~~~~~g~~v~l~v~R~~g~~~~~~v~~~~~~ 315 (324)
T 1y8t_A 282 AAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAE 315 (324)
T ss_dssp HHHHTSCTTCEEEEEEECSSCCEEEEEEECEEC-
T ss_pred HHHHhcCCCCEEEEEEEECCCCEEEEEEEEccCC
Confidence 98876 6899999999985578888888876544
No 9
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=8.1e-47 Score=393.36 Aligned_cols=295 Identities=35% Similarity=0.563 Sum_probs=252.4
Q ss_pred hHHHHHHHhCCceEEEEcccc-----------ccccc--------------------------------cCCceeEEEEE
Q 012318 126 TIANAAARVCPAVVNLSAPRE-----------FLGIL--------------------------------SGRGIGSGAIV 162 (466)
Q Consensus 126 ~~~~~~~~~~~SVV~I~~~~~-----------~~~~~--------------------------------~~~~~GSGfiI 162 (466)
+++++++++.||||.|.+... +..++ ...+.||||+|
T Consensus 14 ~~~~~~~~~~pavV~i~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSG~ii 93 (448)
T 1ky9_A 14 SLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVII 93 (448)
T ss_dssp CSHHHHHHHGGGEEEEEEEEEEEECCCCSSCCTTCCCC---------------------------CEEEEEEEEEEEEEE
T ss_pred cHHHHHHHhCCcEEEEEEEEEecccCCccchhhhhhhccccccccccccccccccccccccccccccccccccEEEEEEE
Confidence 589999999999999986421 00111 01257999999
Q ss_pred eCC-CeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEE
Q 012318 163 DAD-GTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVV 241 (466)
Q Consensus 163 ~~~-G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~ 241 (466)
+++ ||||||+||+.++ ..+.|.+.+|+.++|++++.|+.+|||||+++....+++++|+++..++.|++|+
T Consensus 94 ~~~~g~IlTn~HVv~~a--------~~i~V~~~dg~~~~a~vv~~d~~~DlAvlkv~~~~~~~~~~l~~s~~~~~G~~V~ 165 (448)
T 1ky9_A 94 DADKGYVVTNNHVVDNA--------TVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTV 165 (448)
T ss_dssp ETTTTEEEEEHHHHTTE--------EEEEEEETTSCEEEEEEEEEETTTTEEEEEESSCCSCCCCCBCCGGGCCTTCEEE
T ss_pred ECCCCEEEEChHHhCCC--------CEEEEEECCCCEEEEEEEEEcCCCCEEEEEecCCCCCceEEecccccCCCCCEEE
Confidence 987 9999999999885 6899999999999999999999999999999866788999999888899999999
Q ss_pred EEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccceeecCCCeEEEEEEeEecC---CCeeeEEE
Q 012318 242 AMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAA---ADGLSFAV 318 (466)
Q Consensus 242 ~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~---~~g~~~ai 318 (466)
++|||.+...+++.|+|+...+... .. .....++++|+.+++|+|||||||.+|+||||+++.... ..+++|+|
T Consensus 166 aiG~P~g~~~tvt~Givs~~~r~~~--~~-~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaI 242 (448)
T 1ky9_A 166 AIGNPFGLGETVTSGIVSALGRSGL--NA-ENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAI 242 (448)
T ss_dssp EEECTTSSSCEEEEEEEEEESSCC--------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEE
T ss_pred EEECCCCCCCeEEeEEEeecccccc--CC-CCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeee
Confidence 9999999999999999999876511 11 123568999999999999999999999999999987542 35789999
Q ss_pred eHHHHHHHHHHHHHcCCccccccccccccccceeeeeeeeeecccccceeecCCHHHHHHhhccCCCCCCCCcceeeccc
Q 012318 319 PIDSAAKIIEQFKKNGWMHVEQKVPLLWSTCKQVVILCRRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVV 398 (466)
Q Consensus 319 p~~~i~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V 398 (466)
|++.+++++++|+++| ++.++|||+.+.++++++++.++.. ...|++|.+|
T Consensus 243 P~~~~~~~~~~l~~~g-----------------------~v~~~~LGv~~~~~~~~~a~~lgl~------~~~G~~V~~V 293 (448)
T 1ky9_A 243 PSNMVKNLTSQMVEYG-----------------------QVKRGELGIMGTELNSELAKAMKVD------AQRGAFVSQV 293 (448)
T ss_dssp EHHHHHHHHHHHHHHS-----------------------SCCBCCCCCSCCCTTSHHHHTSCCT------TCCSEECCCC
T ss_pred ecccchhhHHHHhhhc-----------------------ccceeccccccccccHHHHHHhCCC------CCCceEEEEe
Confidence 9999999999999999 7889999999999998888877542 2479999999
Q ss_pred CCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecC
Q 012318 399 TPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEE 461 (466)
Q Consensus 399 ~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~ 461 (466)
.++|||+++||++||+|++|||++|.++.++..++.. ++|++++|+|.| +|+.+++++++.+
T Consensus 294 ~~gspA~~AGL~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~~~~ 356 (448)
T 1ky9_A 294 LPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLR-DGKQVNVNLELQQ 356 (448)
T ss_dssp TTCSSSTTTTCCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEEES-SSCEEECCCC---
T ss_pred ccCCHHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEE-CCEEEEEEEEEec
Confidence 9999999999999999999999999999999998876 689999999999 8888877776543
No 10
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=1.9e-45 Score=386.79 Aligned_cols=287 Identities=26% Similarity=0.375 Sum_probs=237.1
Q ss_pred HhCCceEEEEccccccc-------cccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC-CCcEEEEEEE
Q 012318 133 RVCPAVVNLSAPREFLG-------ILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ-DGRTFEGTVL 204 (466)
Q Consensus 133 ~~~~SVV~I~~~~~~~~-------~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~-~g~~~~a~vv 204 (466)
...+|||+|.+.....+ .....+.||||+|+ +||||||+|||.++ ..+.|.+. ||+.|+|+++
T Consensus 45 ~~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~-dG~IlTN~HVV~~a--------~~i~V~~~~dg~~~~A~vv 115 (539)
T 4fln_A 45 SFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIG-DGKLLTNAHCVEHD--------TQVKVKRRGDDRKYVAKVL 115 (539)
T ss_dssp HHHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEE-TTEEEECGGGGTTE--------EEEEEECTTCCCCEEEEEE
T ss_pred ccCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEE-CCEEEEChHHcCCC--------CeEEEEEccCCEEEEEEEE
Confidence 35689999987543322 12345789999998 68999999999885 68999885 8999999999
Q ss_pred EecCCCCEEEEEeCCCC---CCCccccCCCCCCCCCCEEEEEecCCCCCC-ceEEeEEeeeecCccCCCCCCccccEEEE
Q 012318 205 NADFHSDIAIVKINSKT---PLPAAKLGTSSKLCPGDWVVAMGCPHSLQN-TVTAGIVSCVDRKSSDLGLGGMRREYLQT 280 (466)
Q Consensus 205 ~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~-~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~ 280 (466)
+.|+.+||||||++... .++++.+++ .++.|++|+++|||.++.. +++.|+|+++.+.... .+.....+||+
T Consensus 116 ~~D~~~DLAvLkv~~~~~~~~~~pl~~g~--~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~--~~~~~~~~IQt 191 (539)
T 4fln_A 116 VRGVDCDIALLSVESEDFWKGAEPLRLGH--LPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYA--HGSSDLLGIQI 191 (539)
T ss_dssp EEETTTTEEEEEECCSSSSTTCCCCCBCC--CCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECT--TSCCEEEEEEE
T ss_pred EECCCCCEEEEEEeCCcCCcCCceeecCC--cCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccC--CCCcceeEEEE
Confidence 99999999999998653 345566654 4678999999999998764 8999999988775432 22334457999
Q ss_pred cccCCCCCccceeecCCCeEEEEEEeEec--CCCeeeEEEeHHHHHHHHHHHHHcCCccccccccccccccceeeeeeee
Q 012318 281 DCAINAGNSGGPLVNIDGEIVGINIMKVA--AADGLSFAVPIDSAAKIIEQFKKNGWMHVEQKVPLLWSTCKQVVILCRR 358 (466)
Q Consensus 281 ~~~i~~G~SGGPlvd~~G~VVGI~~~~~~--~~~g~~~aip~~~i~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 358 (466)
|+.+++|||||||||.+|+||||++.... ...+++|+||++.+++++++|+++| +
T Consensus 192 DAaInpGnSGGPLvn~~GeVIGIntai~~~~~~~gigfAIP~~~v~~vl~~l~~~G-----------------------~ 248 (539)
T 4fln_A 192 DAAINPGNSGGPAFNDQGECIGVAFQVYRSEETENIGYVIPTTVVSHFLTDYERNG-----------------------K 248 (539)
T ss_dssp SSCCCTTTTTSEEECSSSCEEEEECCCC-----CCCEEEEEHHHHHHHHHHHHTTT-----------------------S
T ss_pred EeEecCCCccchhccCCCcEEEEEEEEecCCCCCcceecccHHHHHHHHHHHHHcC-----------------------e
Confidence 99999999999999999999999987653 3567999999999999999999999 6
Q ss_pred ee-cccccceeecC-CHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHH--------
Q 012318 359 VV-RPWLGLKMLDL-NDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITE-------- 428 (466)
Q Consensus 359 ~~-~~~lG~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~-------- 428 (466)
+. +||||+.+.++ ++++++.++.. ...|++|.+|.++|||+++ |++||+|++|||++|.+..+
T Consensus 249 ~~~r~~LGv~~~~~~~~~~~~~~~l~------~~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~ 321 (539)
T 4fln_A 249 YTGYPCLGVLLQKLENPALRECLKVP------TNEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSER 321 (539)
T ss_dssp CCCCCBCCEEEEECCCHHHHHHHTCS------SSBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCE
T ss_pred EEeeeecceEEEecCCHHHHHhcCCC------CcCceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchh
Confidence 65 89999999887 67777777652 3579999999999999987 99999999999999976543
Q ss_pred --HHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCC
Q 012318 429 --IIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEAN 463 (466)
Q Consensus 429 --~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 463 (466)
+..++.. ++|++++|+|+| +|+++++++++.+.+
T Consensus 322 ~~l~~~v~~~~~Gd~v~l~v~R-~Gk~~~v~Vtl~~~~ 358 (539)
T 4fln_A 322 IAFRYLISQKFAGDIAEIGIIR-AGEHKKVQVVLRPRV 358 (539)
T ss_dssp EETHHHHHTSCTTCEEEEEEEE-TTEEEEEEEECBCCC
T ss_pred HHHHHHHHcCCCCCEEEEEEEE-CCEEEEEEEEEccCc
Confidence 5566655 899999999999 999999999987654
No 11
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=1.2e-35 Score=284.65 Aligned_cols=211 Identities=36% Similarity=0.619 Sum_probs=166.9
Q ss_pred hhHHHHHHHhCCceEEEEcccccc-------------ccc--------cC-CceeEEEEEeCCCeEEeccccccCCCCCC
Q 012318 125 DTIANAAARVCPAVVNLSAPREFL-------------GIL--------SG-RGIGSGAIVDADGTILTCAHVVVDFHGSR 182 (466)
Q Consensus 125 ~~~~~~~~~~~~SVV~I~~~~~~~-------------~~~--------~~-~~~GSGfiI~~~G~ILT~aHvv~~~~~~~ 182 (466)
.++.++++++.||||.|.+..... .++ .. .+.||||+|+++||||||+||+.+.
T Consensus 4 ~~~~~~~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~---- 79 (239)
T 1l1j_A 4 SPIVNVVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGA---- 79 (239)
T ss_dssp CHHHHHHHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSC----
T ss_pred hhHHHHHHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCC----
Confidence 468999999999999999754211 001 11 5679999999989999999999875
Q ss_pred CCCCceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCC-CCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeee
Q 012318 183 ALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK-TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCV 261 (466)
Q Consensus 183 ~~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~-~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~ 261 (466)
..+.|.+.+|+.++++++.+|+.+||||||++.+ ..++++.|+++..++.|++|+++|||.+...+++.|+++..
T Consensus 80 ----~~i~V~~~~g~~~~a~vv~~d~~~DlAllkl~~~~~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~~vt~Givs~~ 155 (239)
T 1l1j_A 80 ----DNITVTMLDGSKYDAEYIGGDEELDIAVIKIKASDKKFPYLEFGDSDKVKIGEWAIAIGNPLGFQHTVTVGVVSAT 155 (239)
T ss_dssp ----SSCEEECTTSCEEEBCCCEEETTTTEEEEEBCCSSSCCCCCEECCGGGCCTTCEEEEEECTTSSSCEEEEEEEEEE
T ss_pred ----CEEEEEECCCCEEEEEEEEEcCCCCEEEEEEcCCCCCCceEEecCccCCccccEEEEEECCCCCCCcEEEEEEecc
Confidence 5788999999999999999999999999999976 67899999887778999999999999998889999999887
Q ss_pred ecCccCCCCCCccccEEEEcccCCCCCccceeecCCCeEEEEEEeEecC--CCeeeEEEeHHHHHHHHHHHHHcCCcccc
Q 012318 262 DRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAA--ADGLSFAVPIDSAAKIIEQFKKNGWMHVE 339 (466)
Q Consensus 262 ~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~--~~g~~~aip~~~i~~~l~~l~~~g~~~~~ 339 (466)
.+.............++++++.+|+|+|||||+|.+|+||||++++... ..+++|+||++.+++++++|+++|
T Consensus 156 ~r~~~~~~~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g----- 230 (239)
T 1l1j_A 156 NRRIPKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTILTQK----- 230 (239)
T ss_dssp EEEEECTTSSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGCC-------
T ss_pred ccccccCCCccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeecCCCcCceEEEEEHHHHHHHHHHHHHCC-----
Confidence 6642111000123468899999999999999999999999999987642 247899999999999999999999
Q ss_pred ccccccccccceeeeeeeeeecccccc
Q 012318 340 QKVPLLWSTCKQVVILCRRVVRPWLGL 366 (466)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~lG~ 366 (466)
++.|+|||+
T Consensus 231 ------------------~v~r~~lGv 239 (239)
T 1l1j_A 231 ------------------KVEKAYLGV 239 (239)
T ss_dssp ---------------------------
T ss_pred ------------------CCccceeCc
Confidence 888999996
No 12
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=9.2e-35 Score=279.17 Aligned_cols=198 Identities=37% Similarity=0.628 Sum_probs=161.2
Q ss_pred hHHHHHHHhCCceEEEEcccccc----------ccc----------cCCceeEEEEEeCC-CeEEeccccccCCCCCCCC
Q 012318 126 TIANAAARVCPAVVNLSAPREFL----------GIL----------SGRGIGSGAIVDAD-GTILTCAHVVVDFHGSRAL 184 (466)
Q Consensus 126 ~~~~~~~~~~~SVV~I~~~~~~~----------~~~----------~~~~~GSGfiI~~~-G~ILT~aHvv~~~~~~~~~ 184 (466)
+++++++++.||||.|.+..... .++ ...+.||||+|+++ ||||||+||+.+.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a------ 87 (245)
T 3sti_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQA------ 87 (245)
T ss_dssp BSHHHHHHHGGGEEEC----------------------------------CCEEEEEETTTTEEEECGGGC---------
T ss_pred CHHHHHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCC------
Confidence 58999999999999998764221 111 12478999999998 9999999999885
Q ss_pred CCceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecC
Q 012318 185 PKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRK 264 (466)
Q Consensus 185 ~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~ 264 (466)
..+.|.+.+|+.++++++..|+.+||||||++.+..+++++|+++..++.|++|+++|||.+...+++.|+|+...+.
T Consensus 88 --~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~~~ 165 (245)
T 3sti_A 88 --QKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRS 165 (245)
T ss_dssp ---CEEEECTTSCEEEEEEEEEETTTTEEEEEESSCCSCCCCCBCCGGGCCTTBEEEEEECGGGSCCEEEEEEEEECSSC
T ss_pred --CEEEEEECCCCEEEEEEEEecCCCCEEEEEeccCCCCceeeecCcCCCCCCCEEEEEECCCCCCCcEEeeEEeeeccc
Confidence 589999999999999999999999999999987778999999988889999999999999999999999999988665
Q ss_pred ccCCCCCCccccEEEEcccCCCCCccceeecCCCeEEEEEEeEec---CCCeeeEEEeHHHHHHHHHHHHHcC
Q 012318 265 SSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVA---AADGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 265 ~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~---~~~g~~~aip~~~i~~~l~~l~~~g 334 (466)
. +.. .....++++++.+++|+|||||||.+|+||||+++... ...+++|+||++.+++++++|+++|
T Consensus 166 ~--~~~-~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g 235 (245)
T 3sti_A 166 G--LNL-EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFG 235 (245)
T ss_dssp S--SCC-TTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHH
T ss_pred c--cCC-CCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcC
Confidence 2 111 12345789999999999999999999999999998765 3357899999999999999999999
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=100.00 E-value=1.7e-33 Score=269.63 Aligned_cols=199 Identities=39% Similarity=0.598 Sum_probs=171.0
Q ss_pred hhHHHHHHHhCCceEEEEccccccc---cccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEE
Q 012318 125 DTIANAAARVCPAVVNLSAPREFLG---ILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEG 201 (466)
Q Consensus 125 ~~~~~~~~~~~~SVV~I~~~~~~~~---~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a 201 (466)
.++.++++++.+|||+|........ .....+.||||+|+++||||||+||+.+. ..+.|.+.+|+.+++
T Consensus 20 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~--------~~~~V~~~~g~~~~a 91 (237)
T 3lgi_A 20 ASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDA--------DQIIVALQDGRVFEA 91 (237)
T ss_dssp CBCHHHHHHHGGGEEEEEEECCTTTCTTSCCEEEEEEEEEEETTTEEEEEHHHHTTC--------SEEEEECTTSCEEEE
T ss_pred cCHHHHHHHhCCcEEEEEEEecccCcccccccceEEEEEEEeCCCEEEEeeeecCCC--------CEEEEEeCCCCEEEE
Confidence 4588999999999999998754321 11234689999999999999999999875 689999999999999
Q ss_pred EEEEecCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEc
Q 012318 202 TVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTD 281 (466)
Q Consensus 202 ~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~ 281 (466)
+++..|+.+|||||+++.+..+++++|+++..+..|+.|+++|||.+....++.|+++...+..... .....+++++
T Consensus 92 ~vv~~d~~~DlAll~l~~~~~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~~~~g~vs~~~~~~~~~---~~~~~~i~~d 168 (237)
T 3lgi_A 92 LLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNP---TGRQNFLQTD 168 (237)
T ss_dssp EEEEEETTTTEEEEECCCSSCCCCCCCCTTCCCCTTBEEEEEECGGGSCSEEEEEEEEEECCSSCCT---TSCSCCEEEC
T ss_pred EEEEEcCCCCEEEEEecCCCCCceEeccCcccCCCCCEEEEEECCCCCCCcEEEEEEEecccccccC---CCcCCEEEEc
Confidence 9999999999999999976668899998777889999999999999988999999998877653221 2234578999
Q ss_pred ccCCCCCccceeecCCCeEEEEEEeEecC------CCeeeEEEeHHHHHHHHHHHHHcC
Q 012318 282 CAINAGNSGGPLVNIDGEIVGINIMKVAA------ADGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 282 ~~i~~G~SGGPlvd~~G~VVGI~~~~~~~------~~g~~~aip~~~i~~~l~~l~~~g 334 (466)
+.+++|+|||||||.+|+||||+++.... ..+++|+||++.+++++++|+++|
T Consensus 169 ~~i~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g 227 (237)
T 3lgi_A 169 ASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDG 227 (237)
T ss_dssp SCCCTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHS
T ss_pred CccCCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcC
Confidence 99999999999999999999999987542 456899999999999999999999
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=100.00 E-value=9.1e-34 Score=270.40 Aligned_cols=199 Identities=45% Similarity=0.718 Sum_probs=164.8
Q ss_pred chhHHHHHHHhCCceEEEEccccc--cccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEE
Q 012318 124 RDTIANAAARVCPAVVNLSAPREF--LGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEG 201 (466)
Q Consensus 124 ~~~~~~~~~~~~~SVV~I~~~~~~--~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a 201 (466)
...++++++++.+|||+|...... .+.......||||+|+++||||||+||+.+. ..+.|.+.+++.+.+
T Consensus 30 ~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~--------~~i~V~~~~g~~~~a 101 (231)
T 3tjo_A 30 YNFIADVVEKIAPAVVHIELFRKLPFSKREVPVASGSGFIVSEDGLIVTNAHVVTNK--------HRVKVELKNGATYEA 101 (231)
T ss_dssp SCHHHHHHHHHGGGEEEEEEEEECTTSSCEEEEEEEEEEECSTTCEEEEETTTCCSS--------SEEEEECTTSCEEEE
T ss_pred hhHHHHHHHHhcCcEEEEEEEeccccCCCccccceEEEEEEeCCCEEEEchhcccCC--------ceEEEEcCCCCEEEE
Confidence 467999999999999999976531 1111223679999999999999999999874 689999999999999
Q ss_pred EEEEecCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEc
Q 012318 202 TVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTD 281 (466)
Q Consensus 202 ~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~ 281 (466)
+++..|+.+|||||+++.+..++++.|+++..++.|+.|+++|||.+...+++.|.++...+.....+.......+++++
T Consensus 102 ~v~~~d~~~DlAlL~l~~~~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~d 181 (231)
T 3tjo_A 102 KIKDVDEKADIALIKIDHQGKLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTD 181 (231)
T ss_dssp EEEEEETTTTEEEEECCCSSCCCCCCBCCGGGCCTTCEEEEEEEEETTEEEEEEEEEEECC-------------CCEEES
T ss_pred EEEEecCCCCEEEEEecCCCCCCceecCCcCCCCCCCEEEEEECCCCCCCceeeEEEeeccccccccccCCCcccEEEEc
Confidence 99999999999999999777889999988778899999999999999888899999988766543333333344678999
Q ss_pred ccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHH
Q 012318 282 CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 282 ~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~ 332 (466)
+.+++|+|||||||.+|+||||++++.. .+++|+||++.++++|+++++
T Consensus 182 a~i~~G~SGGPLv~~~G~vVGI~s~~~~--~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 182 AIINYGNAGGPLVNLDGEVIGINTLKVT--AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp SCCCTTTTTSEEECTTSCEEEEEEEEEE--TTEEEEEEHHHHHHHHHHHHT
T ss_pred CCcCCCCchhHeecCCCeEEEEEeEEec--CCeEEEEEHHHHHHHHHHHhh
Confidence 9999999999999999999999999764 579999999999999999875
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.97 E-value=3.7e-30 Score=246.27 Aligned_cols=193 Identities=23% Similarity=0.336 Sum_probs=159.5
Q ss_pred HHHHHHHhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEe
Q 012318 127 IANAAARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNA 206 (466)
Q Consensus 127 ~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~ 206 (466)
-.++++++.+|||+|....... .....||||+|+ +||||||+||+.+. ..+.|.+.+ +.+.++++.+
T Consensus 33 ~~~~~~~~~~svV~I~~~~~~~---~~~~~GsG~iI~-~~~VlTaaH~v~~~--------~~~~V~~~~-~~~~~~~v~~ 99 (237)
T 3k6y_A 33 NNPVVAATEPSVVKIRSLAPRC---QKVLEGTGFVIS-PDRVMTNAHVVAGS--------NNVTVYAGD-KPFEATVVSY 99 (237)
T ss_dssp GCHHHHHHGGGEEEEEEEEGGG---TEEEEEEEEEEE-TTEEEECGGGTTTC--------SEEEEEETT-EEEECEEEEE
T ss_pred cHHHHHHhcCCEEEEEEEecCC---CcceeEEEEEEE-CCEEEECHHHcCCC--------ceEEEEECC-cEEEEEEEEE
Confidence 3678999999999999865331 234689999999 67999999999874 578899888 4889999999
Q ss_pred cCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccC--CCCCC-ccccEEEEccc
Q 012318 207 DFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSD--LGLGG-MRREYLQTDCA 283 (466)
Q Consensus 207 d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~--~~~~~-~~~~~i~~~~~ 283 (466)
|+.+||||||++ ...++++.|. +..+..|+.|+++|||.+.....+.|.++...+..+. +.... ....++++++.
T Consensus 100 ~~~~DiAll~l~-~~~~~~~~l~-~~~~~~G~~v~v~G~p~g~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (237)
T 3k6y_A 100 DPSVDVAILAVP-HLPPPPLVFA-AEPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRAD 177 (237)
T ss_dssp ETTTTEEEEECT-TCCSCCCCBC-SSCCCTTCEEEEEECGGGCSCEEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEESC
T ss_pred cCCCCEEEEEeC-CCCCCceecC-CCCCCCCCEEEEEECCCCCCCccceeEEEeeEeecccccccCCCcccccEEEecCc
Confidence 999999999999 4678888997 5678999999999999988888888887665443222 11112 34467899999
Q ss_pred CCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHHcC
Q 012318 284 INAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 284 i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~~g 334 (466)
+|+|+|||||||.+|+||||+++...+..+++|+||++.++++++++...+
T Consensus 178 ~~~GdSGGPLv~~~G~vvGI~s~~~~~~~~~~~aip~~~v~~~l~~~~~~~ 228 (237)
T 3k6y_A 178 VEQGDSGGPLIDLNGQVLGVVFGAAIDDAETGFVLTAGEVAGQLAKIGATQ 228 (237)
T ss_dssp CCTTCTTCEEECTTSCEEEEEEEECSSSTTEEEEEEHHHHHGGGGGTTCCS
T ss_pred cCCCccHHHEECCCCEEEEEEEeeccCCCcEEEEEEHHHHHHHHHHccCCC
Confidence 999999999999999999999998777778999999999999999995544
No 16
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.88 E-value=3.1e-22 Score=187.71 Aligned_cols=177 Identities=18% Similarity=0.298 Sum_probs=129.3
Q ss_pred CceEEEEccccc-cccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEe----CCCcEEEEE-EEEecCC
Q 012318 136 PAVVNLSAPREF-LGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTL----QDGRTFEGT-VLNADFH 209 (466)
Q Consensus 136 ~SVV~I~~~~~~-~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~----~~g~~~~a~-vv~~d~~ 209 (466)
+++|+|.....+ +........||||+|++ +||||||||+.+... ...+.|.+ .+++.+.++ ++.+|+.
T Consensus 3 ~~~~~i~~~~~~P~~v~~~~~~c~G~lI~~-~~VLTaaHcv~~~~~-----~~~i~v~~~~~~~~g~~~~~~~v~~~~~~ 76 (210)
T 2as9_A 3 KNVTQVKDTNNFPYNGVVSFKDATGFVIGK-NTIITNKHVSKDYKV-----GDRITAHPNGDKGNGGIYKIKSISDYPGD 76 (210)
T ss_dssp CCEEECSCTTSTTGGGEEECSSCEEEEEET-TEEEECHHHHHHCCT-----TCEEEESCCGGGCCSCEEEEEEEEECSSS
T ss_pred CceEEeecCCcCCeEEEEEeeeEEEEEEeC-CEEEECHhHCCccCC-----CCEEEEEeCcccCCCCEEEEEEEEeCCCC
Confidence 456666543321 11111235799999997 499999999976421 12566653 467788874 7888999
Q ss_pred CCEEEEEeCCC------------CCCCccccCCCCCCCCCCEEEEEecCCCCCCc----eEEeEEeeeecCccCCCCCCc
Q 012318 210 SDIAIVKINSK------------TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT----VTAGIVSCVDRKSSDLGLGGM 273 (466)
Q Consensus 210 ~DlAlLkv~~~------------~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~----~t~G~Vs~~~~~~~~~~~~~~ 273 (466)
+|||||+++.+ ..++++.+. ..+..|+.++++|||.+.... +..|+++...
T Consensus 77 ~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~--~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~----------- 143 (210)
T 2as9_A 77 EDISVMNIEEQAVERGPKGFNFNENVQAFNFA--KDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIK----------- 143 (210)
T ss_dssp SSCEEEEECSEEEEEETTEEEGGGSCCCCCBC--SCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEE-----------
T ss_pred CcEEEEEecCccccccccccccccccceeecC--CCCCCCCEEEEEeCCCCCCCCcceEEeeeEEcccc-----------
Confidence 99999999862 135677774 367899999999999865432 3667776542
Q ss_pred cccEEEEcccCCCCCccceeecCCCeEEEEEEeEec--CCCeeeEEEeHHHHHHHHHHHHH
Q 012318 274 RREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVA--AADGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 274 ~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~--~~~g~~~aip~~~i~~~l~~l~~ 332 (466)
..++++++.+|+|+|||||+|.+|+||||++++.. +....+|++|.+.|+++++..++
T Consensus 144 -~~~i~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~i~~f~~~~~~ 203 (210)
T 2as9_A 144 -DNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIE 203 (210)
T ss_dssp -TTEEEEECCCCTTCTTCEEECTTSCEEEEECCSCCCTTCSSEEEEECCHHHHHHHHTTCC
T ss_pred -CCeEEEcCccCCCCccCcEECCCCeEEEEEecccccCCccccccEEEcHHHHHHHHHhhh
Confidence 23578889999999999999989999999999865 33556899999999999887654
No 17
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.88 E-value=6.3e-22 Score=177.86 Aligned_cols=135 Identities=22% Similarity=0.274 Sum_probs=100.9
Q ss_pred CceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCCC-CCCccccCCCC
Q 012318 154 RGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKT-PLPAAKLGTSS 232 (466)
Q Consensus 154 ~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~~l~~s~ 232 (466)
.+.||||+| +|+||||+||+.+. ..+.|.+ +++.++++++ .|+..||||||++... ++.+++|+++.
T Consensus 20 ~~~GSGfii--~g~IlTn~HVV~~~--------~~i~V~~-dg~~~~a~vv-~d~~~DlAlLkv~~~~~~~~~l~l~~~~ 87 (163)
T 2w5e_A 20 EGKGTGFFS--GNDIVTAAHVVGNN--------TFVNVCY-EGLMYEAKVR-YMPEKDIAFITCPGDLHPTARLKLSKNP 87 (163)
T ss_dssp TEEEEEEEE--TTEEEEEHHHHTTC--------SEEEEEE-TTEEEEEEEE-ECCSSSEEEEECCTTCCCSCCCCBCSSC
T ss_pred ceeEEEEEE--CCEEEecHHHhCCC--------ceEEEEE-CCEEEEEEEE-EECCCCEEEEEecCCCCCcceEEcCCCC
Confidence 477999999 67999999999885 5788888 8999999999 8999999999999643 44556676543
Q ss_pred CCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccceeecCCCeEEEEEEeEecCCC
Q 012318 233 KLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAAAD 312 (466)
Q Consensus 233 ~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~ 312 (466)
. .+.|+++|+|.+. +. ++..... .....+.+++.+++|+|||||||.+|+||||++..... .
T Consensus 88 ~---~~~v~~~G~p~~~---~~---~s~~~~~--------~~g~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~g~-~ 149 (163)
T 2w5e_A 88 D---YSCVTVMAYVNED---LV---VSTAAAM--------VYGNTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNTGY-T 149 (163)
T ss_dssp C---TTEEEEEEEETTE---EE---EEEEEEE--------EETTEEEEECSCSSCCTTCEEECTTSCEEEEEEEEETT-E
T ss_pred C---CCEEEEEEeCCCC---EE---EEEeccE--------EcCCeEEEEEEeCCCCchhhEEcCCCEEEEEEccCccc-c
Confidence 2 3899999999762 11 1111110 01124677899999999999999999999999875432 3
Q ss_pred eeeEEEe
Q 012318 313 GLSFAVP 319 (466)
Q Consensus 313 g~~~aip 319 (466)
+ +|+|.
T Consensus 150 g-g~ai~ 155 (163)
T 2w5e_A 150 G-GAVII 155 (163)
T ss_dssp E-EEEEC
T ss_pred c-CEEEe
Confidence 3 56653
No 18
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.86 E-value=6.2e-21 Score=182.58 Aligned_cols=170 Identities=23% Similarity=0.360 Sum_probs=121.8
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCC-------------cEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG-------------RTFEG 201 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g-------------~~~~a 201 (466)
.+++|+|... +...|+||+|+++ ||||||||+.+... ..+.|.+.+| ..+.+
T Consensus 43 ~~~~v~i~~~--------~~~~c~G~lI~~~-~VLTAaHcv~~~~~------~~~~v~~~~G~~~~~~~~~~~~~~~~~~ 107 (242)
T 1agj_A 43 YNTIGNVFVK--------GQTSATGVLIGKN-TVLTNRHIAKFANG------DPSKVSFRPSINTDDNGNTETPYGEYEV 107 (242)
T ss_dssp GGGEEEEEET--------TTEEEEEEECSSS-EEEECHHHHGGGTT------CGGGEEEEETCEECTTSCEECTTCCEEE
T ss_pred cceEEEEEEC--------CCccEEEEEEeCC-EEEEChhhcccCCC------CceEEEEecCccccccccccccCCceeE
Confidence 4566777532 2367999999975 99999999976421 1122333222 34778
Q ss_pred EEEEecC---CCCEEEEEeCCCC-------CCCccccCCCCCCCCCCEEEEEecCCCCCCc-eEEeEEeeeecCccCCCC
Q 012318 202 TVLNADF---HSDIAIVKINSKT-------PLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT-VTAGIVSCVDRKSSDLGL 270 (466)
Q Consensus 202 ~vv~~d~---~~DlAlLkv~~~~-------~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~-~t~G~Vs~~~~~~~~~~~ 270 (466)
+.+..|+ .+|||||+++.+. .++++.|.+...+..|+.++++|||.+.... +....+....
T Consensus 108 ~~i~~~~~~~~~DiAll~l~~~~~~~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~~-------- 179 (242)
T 1agj_A 108 KEILQEPFGAGVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTT-------- 179 (242)
T ss_dssp EEEESCTTCTTSCCEEEEECCCTTSCCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEECC--------
T ss_pred EEEEeCCCCCCCcEEEEEEcCCCccccccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEec--------
Confidence 8888888 8999999999763 3788888766667899999999999875432 3333222111
Q ss_pred CCccccEEEEcccCCCCCccceeecCCCeEEEEEEeEecC---CCeeeEEEeHH-HHHHHHHHH
Q 012318 271 GGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAA---ADGLSFAVPID-SAAKIIEQF 330 (466)
Q Consensus 271 ~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~---~~g~~~aip~~-~i~~~l~~l 330 (466)
....+++++.+|+|+|||||++.+|+||||++++... ..+.+|++|+. .+.++|++.
T Consensus 180 ---~~~~~~~~~~~c~GdSGGPl~~~~g~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 180 ---LSRGLRYYGFTVPGNSGSGIFNSNGELVGIHSSKVSHLDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp ---GGGSEEEECCCCGGGTTCEEECTTSEEEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHHH
T ss_pred ---CCceEEEeCCcCCCCCchHhcccCCEEEEEEeccccccCcCCCceeeEEehHHHHHHHHhh
Confidence 1123577889999999999999899999999998652 35688999984 777777653
No 19
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.84 E-value=1.1e-19 Score=177.27 Aligned_cols=177 Identities=22% Similarity=0.307 Sum_probs=126.1
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEe--------CCCcEEEEEEEE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTL--------QDGRTFEGTVLN 205 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~--------~~g~~~~a~vv~ 205 (466)
-.+++|+|..... .+...|+||+|+++ ||||||||+.+.... ...+.|.+ .++.....+++.
T Consensus 18 P~~~~v~i~~~~~-----~~~~~C~G~lI~~~-~VLTAAHCv~~~~~~----~~~i~V~~G~~~~~~~~~g~~~~~~i~~ 87 (274)
T 2o8l_A 18 HYAPVTYIQVEAP-----TGTFIASGVVVGKD-TLLTNKHVVDATHGD----PHALKAFPSAINQDNYPNGGFTAEQITK 87 (274)
T ss_dssp GGTTEEEEEEEET-----TEEEEEEEEEEETT-EEEECHHHHHTTTTC----GGGEEEEETCCBTTBCTTCCEEEEEEEE
T ss_pred CcceEEEEEEEcC-----CCCEEEEEEEEECC-EEEEChhhCcccCCC----cceEEEEecccCcccccCccEEEEEEEe
Confidence 3467777765321 12367999999987 999999999764210 12366643 334444566777
Q ss_pred ecCCCCEEEEEeCCC-------CCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEeEEeeeecCccCCCCCCccc
Q 012318 206 ADFHSDIAIVKINSK-------TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRR 275 (466)
Q Consensus 206 ~d~~~DlAlLkv~~~-------~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~ 275 (466)
.+..+|||||||+.+ ..+.++.|.....+..|+.++++|||.+.... ...|.+.... .
T Consensus 88 ~~~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------~ 155 (274)
T 2o8l_A 88 YSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLK------------G 155 (274)
T ss_dssp CSSSSCCEEEEECCCTTSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------T
T ss_pred CCCCCcEEEEEecCcccccccccccccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecC------------C
Confidence 778899999999965 24678888765567889999999999765322 3445554322 2
Q ss_pred cEEEEcccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHHc
Q 012318 276 EYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 276 ~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~~ 333 (466)
.+++.++.+|+|+||||||+.+|+||||++++.....+.++++. ..++.|++++++.
T Consensus 156 ~~i~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~~~~~~~~~~-~~~~~wI~~~i~~ 212 (274)
T 2o8l_A 156 EAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNGAVFIN-ENVRNFLKQNIED 212 (274)
T ss_dssp TEEEESCCCCTTCTTCEEECTTSCEEEEEEEEETTTEEEEEECC-HHHHHHHHHHCTT
T ss_pred CeEEeCcccCCCCchhheeccCCeEEEEEeCcccCCCCceEEec-HHHHHHHHHHHhh
Confidence 35788999999999999999899999999998754445566664 6677888766543
No 20
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.83 E-value=1.6e-20 Score=174.28 Aligned_cols=157 Identities=21% Similarity=0.343 Sum_probs=111.4
Q ss_pred ceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEe----CCCcEEEE-EEEEecCCCCEEEEEeCCCC--------
Q 012318 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTL----QDGRTFEG-TVLNADFHSDIAIVKINSKT-------- 221 (466)
Q Consensus 155 ~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~----~~g~~~~a-~vv~~d~~~DlAlLkv~~~~-------- 221 (466)
..|+||+|+++ ||||||||+.+.... ...+.+.+ .+++.+.+ +++.+|+.+|||||+++.+.
T Consensus 22 ~~c~G~lI~~~-~VLTaaHcv~~~~~~----~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~ 96 (200)
T 2w7s_A 22 VGGTGVVVGKN-TIVTNKHIAKSNDIF----KNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNK 96 (200)
T ss_dssp TTEEEEEEETT-EEEECHHHHHHHHHT----TCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECSBCTTSCBGGG
T ss_pred ceEEEEEEECC-EEEEChhhcCCcccC----CcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECCCCCCcccccc
Confidence 45999999975 999999999653100 02355543 45677777 47788899999999999641
Q ss_pred CCCccccCCCCCCCCCCEEEEEecCCCCCC----ceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccceeecCC
Q 012318 222 PLPAAKLGTSSKLCPGDWVVAMGCPHSLQN----TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNID 297 (466)
Q Consensus 222 ~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~----~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~ 297 (466)
.++++.|. ..+..|+.++++|||.+... .++.|+++... ..++++++.+|+|+|||||++.+
T Consensus 97 ~v~pi~l~--~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~------------~~~~~~~~~~~~GdSGGPl~~~~ 162 (200)
T 2w7s_A 97 NVSYTKFA--DGAKVKDRISVIGYPKGAQTKYKMFESTGTINHIS------------GTFMEFDAYAQPGNSGSPVLNSK 162 (200)
T ss_dssp SCCCCCBC--CCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEE------------TTEEEECSCCCTTCTTCEEECTT
T ss_pred cccceecc--ccCCCCCEEEEEECCCCCCCccceEEeEEEEEccC------------CCEEEEcceeCCCCccCeEECcC
Confidence 35666664 35778999999999975322 23566665432 23577889999999999999989
Q ss_pred CeEEEEEEeEecCC-CeeeEEE-eHHHHHHHHHHH
Q 012318 298 GEIVGINIMKVAAA-DGLSFAV-PIDSAAKIIEQF 330 (466)
Q Consensus 298 G~VVGI~~~~~~~~-~g~~~ai-p~~~i~~~l~~l 330 (466)
|+||||++++.... ...+|.+ ..+.+++|+++.
T Consensus 163 g~lvGI~s~g~~~~~~~~~~~v~~~~~~~~wI~~~ 197 (200)
T 2w7s_A 163 HELIGILYAGSGKDESEKNFGVYFTPQLKEFIQNN 197 (200)
T ss_dssp SCEEEEEEEEC----CCCEEEEECCHHHHHHHHHT
T ss_pred CEEEEEEeccccCCCCccceeeecHHHHHHHHHhh
Confidence 99999999986432 2344555 346777777653
No 21
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.83 E-value=2e-19 Score=174.90 Aligned_cols=177 Identities=22% Similarity=0.296 Sum_probs=126.0
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEe--------CCCcEEEEEEEE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTL--------QDGRTFEGTVLN 205 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~--------~~g~~~~a~vv~ 205 (466)
-.+++|+|..... .+...|+||+|+++ ||||||||+.+.... ...+.|.+ .+++...++++.
T Consensus 18 P~~~~v~l~~~~~-----~g~~~CgG~lI~~~-~VLTAAHCv~~~~~~----~~~i~V~~G~~~~~~~~~g~~~~~~i~~ 87 (268)
T 1wcz_A 18 HYAPVTYIQVEAP-----TGTFIASGVVVGKD-TLLTNKHVVDATHGD----PHALKAFPSAINQDNYPNGGFTAEQITK 87 (268)
T ss_dssp GGTTEEEEEEEC------CCEEEEEEEECSSS-EEEECHHHHGGGTTC----GGGEEEEETCCBTTBCTTCCEEEEEEEE
T ss_pred CccEEEEEEEEcC-----CCCEEEEEEEEECC-EEEEChhhCCCccCC----cceEEEEecccCcccccCCcEEEEEEec
Confidence 3456777764321 12367999999987 999999999764210 12366653 334444566777
Q ss_pred ecCCCCEEEEEeCCCC-------CCCccccCCCCCCCCCCEEEEEecCCCCCC---ceEEeEEeeeecCccCCCCCCccc
Q 012318 206 ADFHSDIAIVKINSKT-------PLPAAKLGTSSKLCPGDWVVAMGCPHSLQN---TVTAGIVSCVDRKSSDLGLGGMRR 275 (466)
Q Consensus 206 ~d~~~DlAlLkv~~~~-------~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~---~~t~G~Vs~~~~~~~~~~~~~~~~ 275 (466)
++..+|||||||+.+. .+.++.|.....+..|+.++++|||.+... ....+.++... .
T Consensus 88 ~~~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------~ 155 (268)
T 1wcz_A 88 YSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLK------------G 155 (268)
T ss_dssp CSSSSCCEEEEECCCTTSCCHHHHSCCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------T
T ss_pred CCCCCcEEEEEecCcccccccccccceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeC------------C
Confidence 7788999999999753 367788876556788999999999976432 23445554332 2
Q ss_pred cEEEEcccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHHc
Q 012318 276 EYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 276 ~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~~ 333 (466)
.+++.++.+|.|+|||||++.+|+||||++++.....+.++++. ..+..|++++++.
T Consensus 156 ~~i~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~~~~~~~~~~-~~~~~wI~~~i~~ 212 (268)
T 1wcz_A 156 EAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNGAVFIN-ENVRNFLKQNIED 212 (268)
T ss_dssp TEEEESBCCCTTCTTCEEECTTSCEEEEEEEEETTTEEEEEECC-HHHHHHHHHHCTT
T ss_pred CeEEEecccCCCCccCeEEccCCEEEEEEeCCccCCcceeEEcC-HHHHHHHHHHHHh
Confidence 36788899999999999998899999999998754445666675 6678888776543
No 22
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.81 E-value=2.7e-19 Score=166.16 Aligned_cols=157 Identities=21% Similarity=0.380 Sum_probs=112.0
Q ss_pred ceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEe----CCCcEEE-EEEEEecCCCCEEEEEeCCCC--------
Q 012318 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTL----QDGRTFE-GTVLNADFHSDIAIVKINSKT-------- 221 (466)
Q Consensus 155 ~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~----~~g~~~~-a~vv~~d~~~DlAlLkv~~~~-------- 221 (466)
..||||+|+++ +|||||||+.+... ...+.+.. .++..+. .+++.++..+|||||+++.+.
T Consensus 22 ~~c~G~lI~~~-~VLTaaHcv~~~~~-----~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~ 95 (204)
T 2vid_A 22 KSATGFVVGKN-TILTNKHVSKNYKV-----GDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGF 95 (204)
T ss_dssp SSCEEEEEETT-EEEECHHHHTTCCT-----TCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSEEEEEETTEE
T ss_pred eeEEEEEEECC-EEEEChhHCCCccC-----CceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCcccccccccc
Confidence 46999999987 99999999976421 12444421 3456676 567777889999999998531
Q ss_pred ----CCCccccCCCCCCCCCCEEEEEecCCCCCC----ceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCcccee
Q 012318 222 ----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQN----TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPL 293 (466)
Q Consensus 222 ----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~----~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl 293 (466)
.+.++.+.. .+..|+.++++|||.+... ....|.++... ...++.++.+|+|+|||||
T Consensus 96 ~~~~~v~pi~l~~--~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~------------~~~~~~~~~~~~GdSGGPl 161 (204)
T 2vid_A 96 NFNDNVTPFKYAA--GAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVE------------GSSIVYSAHTESGNSGSPV 161 (204)
T ss_dssp EHHHHCCCCCBCS--CCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEE------------TTEEEECCCCCGGGTTCEE
T ss_pred cccccccccccCC--cCCCCCEEEEEeCCCCCCCCcceEeeccEEeecc------------CCeEEEecccCCCCccCcE
Confidence 246666753 5788999999999986543 34456665432 2357788999999999999
Q ss_pred ecCCCeEEEEEEeEec--CCCeeeEEE-eHHHHHHHHHHHH
Q 012318 294 VNIDGEIVGINIMKVA--AADGLSFAV-PIDSAAKIIEQFK 331 (466)
Q Consensus 294 vd~~G~VVGI~~~~~~--~~~g~~~ai-p~~~i~~~l~~l~ 331 (466)
++.+|+||||++++.. .....+|.+ +...+++|+++.+
T Consensus 162 ~~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~~~~~wI~~~~ 202 (204)
T 2vid_A 162 LNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENI 202 (204)
T ss_dssp ECTTSCEEEEEEEECC---CCCCEEEECCCHHHHHHHHHHS
T ss_pred ECCCCeEEEEEecCccCCCcccccceeEeCHHHHHHHHhhc
Confidence 9989999999999863 233345543 3377888887654
No 23
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.79 E-value=1e-18 Score=162.10 Aligned_cols=153 Identities=18% Similarity=0.193 Sum_probs=117.6
Q ss_pred eEEEEEeCC--CeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEec-CCCCEEEEEeCCCCCC-Cc-------
Q 012318 157 GSGAIVDAD--GTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD-FHSDIAIVKINSKTPL-PA------- 225 (466)
Q Consensus 157 GSGfiI~~~--G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d-~~~DlAlLkv~~~~~~-~~------- 225 (466)
.+||++.++ ++||||+||+... ..+. .+ ..+.++++..| +..|+||||++.+... +.
T Consensus 18 T~Gf~v~~~~~~~ilTa~Hc~~~~--------~~v~---~~-~~~~g~vv~~~~~~~D~Avi~i~~~~~~~~~v~~~g~~ 85 (198)
T 2h5c_A 18 SVGFSVTRGATKGFVTAGHCGTVN--------ATAR---IG-GAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSF 85 (198)
T ss_dssp ECCEEEEETTEEEEEECGGGCCTT--------CEEE---ET-TEEEEEEEEEECSBSCEEEEEECTTSEEEEEEEETTEE
T ss_pred CcCEEEecCCeeEEEECcccCCCC--------CEEE---eC-CcEEEEEEecCCCCCCEEEEEeCCCCccCceEecCCce
Confidence 579999764 5999999999864 3444 44 47889999999 9999999999864221 22
Q ss_pred cccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccceeecCCCeEEEEEE
Q 012318 226 AKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINI 305 (466)
Q Consensus 226 ~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~ 305 (466)
+.+.....+++|++|+.+|.|.+ +++|+|+.+.+... +.. .....+++++..+.+|||||||+|.+|++|||++
T Consensus 86 ~~v~g~~~~~vG~~V~~~G~~tg----~t~G~V~~~~~~~~-~~~-g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s 159 (198)
T 2h5c_A 86 VTVRGSTEAAVGAAVCRSGRTTG----YQCGTITAKNVTAN-YAE-GAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMS 159 (198)
T ss_dssp EECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-ETT-EEEEEEEEECSCCBTTCTTCEEECTTCBEEEEEE
T ss_pred EEecCcccCCCCCeEEEeecCcc----eEEEEEEeeeeEEE-eCC-CeEeeeEEecccCCCCcceeEEEeeCCEEEEEEE
Confidence 23445667899999999999876 78999998876432 111 1234688999999999999999999999999999
Q ss_pred eEe-----c-----CCCeeeEEEeHHHHHHHH
Q 012318 306 MKV-----A-----AADGLSFAVPIDSAAKII 327 (466)
Q Consensus 306 ~~~-----~-----~~~g~~~aip~~~i~~~l 327 (466)
+.. . ...+.+|++|++.+++.+
T Consensus 160 ~~~~~~~~~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 160 GGNVQSNGNNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp EECCCTTSBSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred eecCccCCCccccccCCceEEEEEHHHHHHHC
Confidence 974 2 123689999998877654
No 24
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.78 E-value=5.4e-20 Score=160.21 Aligned_cols=123 Identities=35% Similarity=0.564 Sum_probs=107.6
Q ss_pred CeeeEEEeHHHHHHHHHHHHHcCCccccccccccccccceeeeeeeeeecccccceeecCCH---HHHHHhhccCCCCCC
Q 012318 312 DGLSFAVPIDSAAKIIEQFKKNGWMHVEQKVPLLWSTCKQVVILCRRVVRPWLGLKMLDLND---MIIAQLKERDPSFPN 388 (466)
Q Consensus 312 ~g~~~aip~~~i~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~---~~~~~~~~~~~~~~~ 388 (466)
.|++|+||++.+++++++|+++| ++.++|||+.+.++++ +.++.++... .
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G-----------------------~v~r~~LGv~~~~~~~~~~~~~~~lgl~~----~ 54 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNG-----------------------KVTRPALGIQMVNLSNVSTSDIRRLNIPS----N 54 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCC-----------------------CSSCCCCCCEEEESSSSCHHHHHHHSSCS----S
T ss_pred CcEEEEeEHHHHHHHHHHHHHcC-----------------------CEeeeEeeEEEEECCchhHHHHHHcCCCc----C
Confidence 47899999999999999999999 7889999999988865 6666665421 1
Q ss_pred CCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCC
Q 012318 389 VKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEAN 463 (466)
Q Consensus 389 ~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 463 (466)
...|++|..|.++|||+ +||++||+|++|||+++.+++++..++.. .+|+.++|+|.| +|+.+++++++.+.+
T Consensus 55 ~~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~~~~~~ 128 (134)
T 2l97_A 55 VTSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYR-NGKEETTSIKLNKLE 128 (134)
T ss_dssp SCSCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEE-TTEEEEEEEECCCC-
T ss_pred CCCCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEE-CCEEEEEEEEEcccC
Confidence 35799999999999999 99999999999999999999999998876 479999999999 899999999987654
No 25
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.76 E-value=2.1e-18 Score=165.56 Aligned_cols=136 Identities=21% Similarity=0.304 Sum_probs=99.4
Q ss_pred CceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC------------CcEEEEEEEEecC---CCCEEEEEeC
Q 012318 154 RGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------------GRTFEGTVLNADF---HSDIAIVKIN 218 (466)
Q Consensus 154 ~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~------------g~~~~a~vv~~d~---~~DlAlLkv~ 218 (466)
...|+||+|+++ ||||||||+.+.... ...+.+.... +..+.++.+..|+ .+|||||+++
T Consensus 47 ~~~c~G~lI~~~-~VLTAaHcv~~~~~~----~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~ 121 (246)
T 1qtf_A 47 STLATGVLIGKN-TIVTNYHVAREAAKN----PSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLK 121 (246)
T ss_dssp TEEEEEEEEETT-EEEECHHHHGGGTTC----GGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEEC
T ss_pred CceEEEEEEECC-EEEECHHhCCCCCCC----ceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEe
Confidence 367999999986 999999999764210 0235554431 1468888888888 9999999999
Q ss_pred CCC-------CCCccccCCCCCCCCCCEEEEEecCCCCCCc-eEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCcc
Q 012318 219 SKT-------PLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT-VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSG 290 (466)
Q Consensus 219 ~~~-------~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~-~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SG 290 (466)
.+. .++++.|.....+..|+.++++|||.+.... .....+.... .+++++.+|+|+||
T Consensus 122 ~~~~~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~~~~--------------~~~~~~~~~~GdSG 187 (246)
T 1qtf_A 122 PNEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIEMFN--------------DSQYFGYTEVGNSG 187 (246)
T ss_dssp CCTTSCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEEESS--------------SSBEESCCCGGGTT
T ss_pred CCccccccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeeeecC--------------cEEEeCCCCCCCch
Confidence 764 3788888766667899999999999875532 1111111100 12345688999999
Q ss_pred ceeecCCCeEEEEEEeEe
Q 012318 291 GPLVNIDGEIVGINIMKV 308 (466)
Q Consensus 291 GPlvd~~G~VVGI~~~~~ 308 (466)
|||||.+|+||||++++.
T Consensus 188 GPlv~~~g~lvGI~s~g~ 205 (246)
T 1qtf_A 188 SGIFNLKGELIGIHSGKG 205 (246)
T ss_dssp CEEECTTCCEEEEEEEEE
T ss_pred hheECCCCEEEEEEeccc
Confidence 999998999999999975
No 26
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.76 E-value=1.4e-17 Score=152.73 Aligned_cols=159 Identities=20% Similarity=0.277 Sum_probs=112.0
Q ss_pred ceeE-EEEEeCC--CeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEec-CCCCEEEEEeCC-CCC----CCc
Q 012318 155 GIGS-GAIVDAD--GTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD-FHSDIAIVKINS-KTP----LPA 225 (466)
Q Consensus 155 ~~GS-GfiI~~~--G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d-~~~DlAlLkv~~-~~~----~~~ 225 (466)
..|| ||++..+ +|||||+||+.+. ..+.+...++..+ +++...+ +.+||||||++. +.. +++
T Consensus 12 ~~ct~Gf~v~~~~~~~ilTaaHcv~~~--------~~~~v~~~~~~~~-g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~ 82 (185)
T 2qa9_E 12 GRCSLGFNVRSGSTYYFLTAGHCTDGA--------TTWWANSARTTVL-GTTSGSSFPNNDYGIVRYTNTTIPKDGTVGG 82 (185)
T ss_dssp CEEECCEEEEETTEEEEEECHHHHTTC--------SEEESSTTSCSEE-EEEEEEECSBSCEEEEEECCSSSCCCCEETT
T ss_pred CcEeccEEEEECCceEEEECcccCCCC--------CcEEecCCCceEe-EEEeccccCCCCEEEEEecCCCccccCccce
Confidence 5677 9999753 5999999999874 4555544443443 5556666 889999999996 322 245
Q ss_pred cccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccceeecCCCeEEEEEE
Q 012318 226 AKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINI 305 (466)
Q Consensus 226 ~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~ 305 (466)
+.+.....+..|+.++++||+.+ .+.+.+........ +........+++.+..+|+|+|||||++. ++++||++
T Consensus 83 ~~l~~~~~~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v~-~~~~~~~~~~~~~~~cac~GDSGGPlv~~-~~~vGI~s 156 (185)
T 2qa9_E 83 QDITSAANATVGMAVTRRGSTTG----THSGSVTALNATVN-YGGGDVVYGMIRTNVCAEPGDSGGPLYSG-TRAIGLTS 156 (185)
T ss_dssp EECCEECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-CSTTCEEEEEEEESCCCCTTCTTCEEEET-TEEEEEEE
T ss_pred eeeCCcccCCCCCEEEEecCCCc----eeEeEEEEEEEEEE-cCCCCEEeceEEecccCCCCCccceEEEC-CEEEEEEE
Confidence 56654456788999999999753 45677766554321 11111122356777888999999999976 49999999
Q ss_pred eEecC--CCeeeEEEeHHHHHHHHH
Q 012318 306 MKVAA--ADGLSFAVPIDSAAKIIE 328 (466)
Q Consensus 306 ~~~~~--~~g~~~aip~~~i~~~l~ 328 (466)
++... ....+++.|++.+++|++
T Consensus 157 ~g~~~~~~~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 157 GGSGNCSSGGTTFFQPVTEALSAYG 181 (185)
T ss_dssp EEEEETTTEEEEEEEEHHHHHHHHT
T ss_pred ecCCCCCCCCcEEEEEHHHHHHhhC
Confidence 97542 235689999999988875
No 27
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.73 E-value=8.2e-17 Score=148.05 Aligned_cols=156 Identities=19% Similarity=0.241 Sum_probs=113.2
Q ss_pred ceeE-EEEEeCCC--eEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEec-CCCCEEEEEeCCCCCC-Cccc--
Q 012318 155 GIGS-GAIVDADG--TILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD-FHSDIAIVKINSKTPL-PAAK-- 227 (466)
Q Consensus 155 ~~GS-GfiI~~~G--~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d-~~~DlAlLkv~~~~~~-~~~~-- 227 (466)
..|| ||+++++| |||||+||+.+. .++ ...++....+++...+ +..|+||||++.+... +.+.
T Consensus 12 ~~CT~Gfiv~~~g~~~ilT~~Hv~~~~--------~~v--~~~~~~~~~g~~~~~~~~~~DiAlikl~~~~~~~~~v~~~ 81 (187)
T 1hpg_A 12 SRCSAAFNVTKGGARYFVTAGHCTNIS--------ANW--SASSGGSVVGVREGTSFPTNDYGIVRYTDGSSPAGTVDLY 81 (187)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTC--------SEE--ESSTTCCEEEEEEEEECSBSCEEEEEECSSCCCCSEEECS
T ss_pred CcCcceEEEEECCeeEEEECcccCCCC--------CeE--EeCCCceeEEEEeCccCCCCCEEEEEeCCCCCcCceEEec
Confidence 3455 99998764 999999999864 333 3455544445665555 7889999999864322 2222
Q ss_pred ------cCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccceeecCCCeEE
Q 012318 228 ------LGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIV 301 (466)
Q Consensus 228 ------l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VV 301 (466)
+..+..++.|+.|+.+|++.+ .+.|+|+.+.+... +. ......++++++.+++|+|||||++. ++++
T Consensus 82 ~g~~~~i~~~~~~~~G~~v~~~G~~~g----~t~G~v~~~~~~v~-~~-~~~~~~~i~t~~~~~~GdSGgpl~~~-~~~v 154 (187)
T 1hpg_A 82 NGSTQDISSAANAVVGQAIKKSGSTTK----VTSGTVTAVNVTVN-YG-DGPVYNMVRTTACSAGGDSGGAHFAG-SVAL 154 (187)
T ss_dssp SSCEEECCEECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-ET-TEEEEEEEEECCCCCTTCTTCEEEET-TEEE
T ss_pred CCceeeeccccCCCCCCEEEEEEcCCC----EeEEEEEEeEEEEE-eC-CCeEeeeEEeccccCCCCCCCeEEEC-CEEE
Confidence 334567899999999999875 68899988876532 11 11234578999999999999999986 5999
Q ss_pred EEEEeEecC--CCeeeEEEeHHHHHHHH
Q 012318 302 GINIMKVAA--ADGLSFAVPIDSAAKII 327 (466)
Q Consensus 302 GI~~~~~~~--~~g~~~aip~~~i~~~l 327 (466)
||+++.... ..+.+|++|++.+++.+
T Consensus 155 Gi~s~~~~~~~~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 155 GIHSGSSGCSGTAGSAIHQPVTEALSAY 182 (187)
T ss_dssp EEEEEESCCBTTBCCCEEEEHHHHHHHH
T ss_pred EEEEeeCCCCCCCCceEEEEHHHHHHHc
Confidence 999987531 23678999998877654
No 28
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.72 E-value=9.4e-17 Score=147.69 Aligned_cols=151 Identities=19% Similarity=0.207 Sum_probs=113.7
Q ss_pred eeEEEEEeC-CC--eEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEec-CCCCEEEEEeCCCCCC-Cc-----
Q 012318 156 IGSGAIVDA-DG--TILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD-FHSDIAIVKINSKTPL-PA----- 225 (466)
Q Consensus 156 ~GSGfiI~~-~G--~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d-~~~DlAlLkv~~~~~~-~~----- 225 (466)
-.+||++.. +| +||||+||+.+. ..+ ...| +.++++..| +..|+||||++.+... +.
T Consensus 15 CTsGf~v~~~~G~~~ilTa~Hc~~~g--------~~v--~~~d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g 81 (188)
T 2oua_A 15 CSVGFAATNASGQPGFVTAGHCGSVG--------TQV--SIGN---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYN 81 (188)
T ss_dssp EECCEEEECTTCCEEEEECGGGCCTT--------CEE--EETT---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGG
T ss_pred EecCEEEEeCCCCEEEEECcccCCCC--------CEE--EecC---ceEEEEeeCCCCCCEEEEEeCCCCccccceeecC
Confidence 468999964 78 999999999653 233 3444 889999999 9999999999864321 11
Q ss_pred ----cccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccceeecCCCeEE
Q 012318 226 ----AKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIV 301 (466)
Q Consensus 226 ----~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VV 301 (466)
+++..+..+++|++|+.+|++.+ .++|+|+.+.+... +.. .....+++++..+.+|+|||||+ .+|+++
T Consensus 82 ~~~~~~l~~~~~~~vG~~v~~~G~~tG----~t~G~v~~~~~~v~-~~~-~~~~~~~~~~~~~~~GDSGgpl~-~~~~~v 154 (188)
T 2oua_A 82 SGGYATVSGSSTAPIGSQVCRSGSTTG----WYCGTIQARNQTVS-YPQ-GTVHSLTRTSVCAEPGDSGGSFI-SGTQAQ 154 (188)
T ss_dssp GCSEEECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-ETT-EEEEEEEEESCCCCTTCTTCEEE-ETTEEE
T ss_pred CcceEeccCccCCCCCCeEEEEEcCCC----eEEEEEEEEeeEEE-eCC-CcEeeeEeeeeecCCCCccceEE-ECCEEE
Confidence 24656677899999999999876 68899988876532 111 12235678888888999999999 489999
Q ss_pred EEEEeEec--CCCeeeEEEeHHHHHHH
Q 012318 302 GINIMKVA--AADGLSFAVPIDSAAKI 326 (466)
Q Consensus 302 GI~~~~~~--~~~g~~~aip~~~i~~~ 326 (466)
||+++... ...+.+|++|++.+++.
T Consensus 155 Gi~s~~~~~~~~~~~~~~~pi~~~l~~ 181 (188)
T 2oua_A 155 GVTSGGSGNCRTGGTTFYQEVNPMLNS 181 (188)
T ss_dssp EEEEEEEEETTTEEEEEEEESHHHHHH
T ss_pred EEEeccCCCCCCCCceEEEEHHHHHHH
Confidence 99999754 33467999998877654
No 29
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.67 E-value=1.1e-15 Score=140.46 Aligned_cols=147 Identities=18% Similarity=0.269 Sum_probs=108.8
Q ss_pred eEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEec-CCCCEEEEEeCCCCCC-C--------cc
Q 012318 157 GSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD-FHSDIAIVKINSKTPL-P--------AA 226 (466)
Q Consensus 157 GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d-~~~DlAlLkv~~~~~~-~--------~~ 226 (466)
-+||+++. +||||+||+.+. .. +...+ ++++..| +..||||||++.+..+ + ++
T Consensus 18 T~Gf~~~~--~ilTa~Hc~~~~--------~~--v~~~d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v 80 (189)
T 2ea3_A 18 SIGFAVNG--GFITAGHCGRTG--------AT--TANPT-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRV 80 (189)
T ss_dssp ECCEEETT--EEEECGGGCCTT--------CE--EETTT-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEE
T ss_pred ccCEEccC--eEEEchhcCCCC--------CE--EEeCC-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCcee
Confidence 46788873 999999999764 33 33444 6788888 8999999999864221 1 23
Q ss_pred ccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccceeecCCCeEEEEEEe
Q 012318 227 KLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIM 306 (466)
Q Consensus 227 ~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~ 306 (466)
++..+..+++|+.|+.+|++.+ +++|+|+.+.+... +.. .....+++++..+.+|+|||||++ +|+++||+++
T Consensus 81 ~l~~s~~~~vG~~v~~~G~~tG----~t~G~Vs~~~~~v~-~~~-~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~ 153 (189)
T 2ea3_A 81 QVAGHTAAPVGSAVCRSGSTTG----WHCGTITALNSSVT-YPE-GTVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSG 153 (189)
T ss_dssp ECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-ETT-EEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEE
T ss_pred ecCCCcCCCCCCEEEEEEeCCc----cEEEEEEecceEEE-eCC-ccCcceEEeeeeccCCCccCeEEE-CCEEEEEEee
Confidence 4655667899999999999866 67899988776532 111 112346788888899999999995 8999999998
Q ss_pred Eec--CCCeeeEEEeHHHHHHHH
Q 012318 307 KVA--AADGLSFAVPIDSAAKII 327 (466)
Q Consensus 307 ~~~--~~~g~~~aip~~~i~~~l 327 (466)
... ...+.+|++|++.+++.+
T Consensus 154 ~~~~c~~~~~~~~~pi~~~l~~~ 176 (189)
T 2ea3_A 154 GSGNCRTGGTTFFQPVNPILQAY 176 (189)
T ss_dssp EEEETTTEEEEEEEEHHHHHHHH
T ss_pred cCCCCCCCCcEEEEEHHHHHHHC
Confidence 754 234689999988776554
No 30
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.65 E-value=6.6e-16 Score=141.09 Aligned_cols=152 Identities=18% Similarity=0.243 Sum_probs=101.9
Q ss_pred ceeE-EEEEeCC--CeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCCCCCC-cc----
Q 012318 155 GIGS-GAIVDAD--GTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKTPLP-AA---- 226 (466)
Q Consensus 155 ~~GS-GfiI~~~--G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~-~~---- 226 (466)
..|| ||+|..+ +|||||+||+.+. ..+.+-..+ ....+.+||||||++.+..++ .+
T Consensus 12 ~~ct~G~~v~~~~~~~vlTaaHc~~~~--------~~~~~G~~~--------~~~~~~~DiAlikl~~~~~~~~~v~~i~ 75 (181)
T 2sga_A 12 SRCSLGFNVSVNGVAHALTAGHCTNIS--------ASWSIGTRT--------GTSFPNNDYGIIRHSNPAAADGRVYLYN 75 (181)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTC--------SEETTEEEE--------EEECSBSCEEEEEESCGGGCCCEEECSS
T ss_pred CcEeccEEEEECCceEEEECcccCCCC--------Cceeeccee--------CCcCCCCCEEEEEccCCCcccceEEecC
Confidence 4677 9999853 4999999999753 222111111 122367899999998642222 12
Q ss_pred ----ccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccceeecCCCeEEE
Q 012318 227 ----KLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVG 302 (466)
Q Consensus 227 ----~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVG 302 (466)
.+.....+..|+.|+++|++.+ .+.|.++....... ...+......++.+..+++|+|||||++.+ +++|
T Consensus 76 ~~~~~~~~~~~~~~G~~v~~~G~~~~----~t~G~v~~~~~~v~-~~~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~vG 149 (181)
T 2sga_A 76 GSYQDITTAGNAFVGQAVQRSGSTTG----LRSGSVTGLNATVN-YGSSGIVYGMIQTNVCAQPGDSGGSLFAGS-TALG 149 (181)
T ss_dssp SCEEECCEECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-CGGGCEEEEEEEESCCCCTTCTTCEEEETT-EEEE
T ss_pred CcceeecccccCCCCCEEEEeecCCC----ccEEEEEEeEEEEE-CCCCCEEeeeEecccccCCCCCCCEEEECC-EEEE
Confidence 2223456789999999999855 46777776654421 111111234567788889999999999765 9999
Q ss_pred EEEeEecC--CCeeeEEEeHHHHHHHHH
Q 012318 303 INIMKVAA--ADGLSFAVPIDSAAKIIE 328 (466)
Q Consensus 303 I~~~~~~~--~~g~~~aip~~~i~~~l~ 328 (466)
|++++... ..+.+++.|++.++++|.
T Consensus 150 I~s~g~~~~~~~~~~v~~~v~~~~~~l~ 177 (181)
T 2sga_A 150 LTSGGSGNCRTGGTTFYQPVTEALSAYG 177 (181)
T ss_dssp EEEEEEEETTTEEEEEEEEHHHHHHHHT
T ss_pred EEEeeCCCCcCCCceEEEEHHHHHHhcC
Confidence 99998642 235789999999887763
No 31
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.65 E-value=8.2e-16 Score=137.02 Aligned_cols=126 Identities=18% Similarity=0.173 Sum_probs=95.8
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCCEE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIA 213 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~DlA 213 (466)
+...+|.|... ..+.||||+|+.+|++||++||+.+. ....|+. +|+++. +.+++..|||
T Consensus 2 ~~~n~~~v~g~--------~~G~GsgF~i~~~g~vVTA~HVv~~~--------~~~~V~~-~G~~~~---Vgf~~~~DlA 61 (198)
T 1mbm_A 2 ARGNVGFVAGS--------SYGTGSVWTRNNEVVVLTASHVVGRA--------NMATLKI-GDAMLT---LTFKKNGDFA 61 (198)
T ss_dssp CCTTEEEEESS--------SEEEEEEEEETTEEEEEEEHHHHCTT--------CEEEEEE-TTEEEE---EECEEETTEE
T ss_pred cccceEEEecc--------cCCccceEEECCCeEEEEeeeEEccC--------ceEEEEE-CCEEEE---eecccCCcEE
Confidence 34567777643 33779999999999999999999764 5778888 898887 7788999999
Q ss_pred EEEe---CCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCcc
Q 012318 214 IVKI---NSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSG 290 (466)
Q Consensus 214 lLkv---~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SG 290 (466)
++++ +.+..++++++.. ++.|+.-+. .+.|.+..+.-. ...++++ .+||||
T Consensus 62 ~l~v~~~~~~g~~P~l~las---p~vG~a~~~----------~~tG~~~~l~g~----------~g~l~~t---~PGDSG 115 (198)
T 1mbm_A 62 EAVTTQSELPGNWPQLHFAQ---PTTGPASWC----------TATGDEEGLLSG----------EVCLAWT---TSGDSG 115 (198)
T ss_dssp EEEECTTTSCSCCCBCCBCC---CCSEEEEEE----------ETTEEEEEEECS----------SCEECCC---CGGGTT
T ss_pred EEEeeccCCCCCCcccccCC---CcccceEEe----------eccccEEEEecC----------CceeEcC---CCCCCC
Confidence 9999 5556678888843 688873222 334555555411 2355555 899999
Q ss_pred ceeecCCCeEEEEEEe
Q 012318 291 GPLVNIDGEIVGINIM 306 (466)
Q Consensus 291 GPlvd~~G~VVGI~~~ 306 (466)
||++|.+ +||||+++
T Consensus 116 sPVl~~~-~vIGV~T~ 130 (198)
T 1mbm_A 116 SAVVQGD-AVVGVHTG 130 (198)
T ss_dssp CEEEETT-EEEEEEEE
T ss_pred CccccCC-eEEEEEec
Confidence 9999998 99999999
No 32
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.64 E-value=8.8e-16 Score=140.82 Aligned_cols=148 Identities=20% Similarity=0.285 Sum_probs=108.7
Q ss_pred EEEEEeC--CCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEec-CCCCEEEEEeCCCCC-CC--------c
Q 012318 158 SGAIVDA--DGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD-FHSDIAIVKINSKTP-LP--------A 225 (466)
Q Consensus 158 SGfiI~~--~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d-~~~DlAlLkv~~~~~-~~--------~ 225 (466)
+||++.+ +++||||+||+.+. ..+.+ +.++++..| +..|+||||++.+.. .+ +
T Consensus 18 ~Gf~v~~~~~~~ilTa~Hc~~~g--------~~v~~-------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~~ 82 (186)
T 2pfe_A 18 IGFSVRQGSQTGFATAGHCGSTG--------TRVSS-------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGT 82 (186)
T ss_dssp CCEEEEETTEEEEEECGGGCCTT--------CEEBT-------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSCE
T ss_pred eeEEEEcCCeeEEEEChhhCCCC--------CEEEE-------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCce
Confidence 5899975 35999999999764 34433 457778887 899999999986421 11 2
Q ss_pred cccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccceeecCCCeEEEEEE
Q 012318 226 AKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINI 305 (466)
Q Consensus 226 ~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~ 305 (466)
+++..+..+++|++|+.+|.+.+ .++|+|+.+.+... +.. .....+++.+..+.+|+|||||+. +|+++||++
T Consensus 83 ~~i~~~~~~~vG~~vc~~G~~tG----~t~G~vs~~~~tv~-~~~-~~~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~s 155 (186)
T 2pfe_A 83 VTVTGSQEAATGSSVCRSGATTG----WRCGTIQSKNQTVR-YAE-GTVTGLTRTTACAEGGDSGGPWLT-GSQAQGVTS 155 (186)
T ss_dssp EECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-ETT-EEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEE
T ss_pred EecCCCCCCCCCCeEEEEEeCCc----eEEEEEEEEeeeEE-eCC-ceEeceEeccEEecCCCccCeEEE-CCEEEEEEe
Confidence 23555667899999999999876 77899988876531 111 112346777778889999999995 889999999
Q ss_pred eEec--CCCeeeEEEeHHHHHHHH
Q 012318 306 MKVA--AADGLSFAVPIDSAAKII 327 (466)
Q Consensus 306 ~~~~--~~~g~~~aip~~~i~~~l 327 (466)
+... ...+.+|++|++.+++.+
T Consensus 156 ~g~~~c~~~~~~~~~pi~~~l~~~ 179 (186)
T 2pfe_A 156 GGTGDCRSGGITFFQPINPLLSYF 179 (186)
T ss_dssp EEEEETTTEEEEEEEEHHHHHHHH
T ss_pred ecCCCCCCCCcEEEEEHHHHHHHC
Confidence 9753 234679999988776544
No 33
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.61 E-value=2.5e-15 Score=126.52 Aligned_cols=102 Identities=38% Similarity=0.640 Sum_probs=88.2
Q ss_pred eeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhcCC
Q 012318 358 RVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRV 437 (466)
Q Consensus 358 ~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~ 437 (466)
++.++|||+.+.+++++..++++.....|+....|++|..|.++|||+++||++||+|++|||+++.+++++.+++..
T Consensus 2 ~v~r~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-- 79 (113)
T 2pzd_A 2 SHMRRYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRT-- 79 (113)
T ss_dssp ---CEECCEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHH--
T ss_pred cccccEeEEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHhC--
Confidence 567899999999999999999877555555556899999999999999999999999999999999999999988876
Q ss_pred CCeEEEEEEECCCeEEEEEEEecCC
Q 012318 438 GEPLKVVVQRANDQLVTLTVIPEEA 462 (466)
Q Consensus 438 g~~v~l~v~R~~g~~~~l~v~~~~~ 462 (466)
++.+.|+|.| +|+.+++++++...
T Consensus 80 ~~~v~l~v~R-~g~~~~~~v~~~~~ 103 (113)
T 2pzd_A 80 QSQLAVQIRR-GRETLTLYVTPEVT 103 (113)
T ss_dssp CSSEEEEEEE-TTEEEEEEECCEEC
T ss_pred CCeEEEEEEE-CCEEEEEEEEEeec
Confidence 6789999999 89988888887643
No 34
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.60 E-value=2.8e-15 Score=126.06 Aligned_cols=102 Identities=27% Similarity=0.598 Sum_probs=88.4
Q ss_pred eeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhcCC
Q 012318 358 RVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRV 437 (466)
Q Consensus 358 ~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~ 437 (466)
++.++|||+.+.+++++..++++..+..++....|++|..|.++|||+++||++||+|++|||+++.++.++..++. .
T Consensus 2 ~v~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~--~ 79 (112)
T 2p3w_A 2 SHMKRFIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQEAVL--T 79 (112)
T ss_dssp CCCEEECCEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHH--H
T ss_pred CcccceeeEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHh--C
Confidence 46789999999999999999988765555555689999999999999999999999999999999999999998884 4
Q ss_pred CCeEEEEEEECCCeEEEEEEEecCC
Q 012318 438 GEPLKVVVQRANDQLVTLTVIPEEA 462 (466)
Q Consensus 438 g~~v~l~v~R~~g~~~~l~v~~~~~ 462 (466)
++.+.|+|.| +|+.+++++++...
T Consensus 80 g~~v~l~v~R-~g~~~~~~v~~~~~ 103 (112)
T 2p3w_A 80 ESPLLLEVRR-GNDDLLFSIAPEVV 103 (112)
T ss_dssp CSSEEEEEEE-TTEEEEEEECCEEE
T ss_pred CCeEEEEEEE-CCEEEEEEEEEeee
Confidence 7789999999 88988888877643
No 35
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.58 E-value=4.9e-13 Score=125.86 Aligned_cols=183 Identities=19% Similarity=0.163 Sum_probs=119.2
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|.+|.|...... .....|+|.+|+++ +|||+|||+.. .+.|.+.. .+.+...-+.
T Consensus 12 ~Pw~v~l~~~~~~----~~~~~CgGtLI~~~-~VLTAAhC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~~~ 76 (226)
T 4ag1_A 12 RPYMAYLEIVTSN----GPSKFCGGFLIRRN-FVLTAAHCAGR----------SITVTLGAHNITEEEDTWQKLEVIKQF 76 (226)
T ss_dssp STTEEEEEEECSS----SSCEEEEEEEEETT-EEEECGGGCCS----------EEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred CCcEEEEEEEcCC----CcccEEEEEEEeCC-EEEECcccCCC----------CeEEEeCCcccCCCCCcceEEEEEEEE
Confidence 5778888754322 12467999999988 99999999853 45555432 1345555555
Q ss_pred ecCC-------CCEEEEEeCCCC----CCCccccCCC-CCCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccCC
Q 012318 206 ADFH-------SDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSDL 268 (466)
Q Consensus 206 ~d~~-------~DlAlLkv~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~~ 268 (466)
.|+. +|||||+|+.+. .+.++.+... ..+..|+.+.+.||.... ...+....+..+....|..
T Consensus 77 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 156 (226)
T 4ag1_A 77 RHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSH 156 (226)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTT
T ss_pred eCCCCCCCCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHccc
Confidence 6654 699999999753 3345555432 234679999999997542 2334455555554444431
Q ss_pred CCCCccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHHc
Q 012318 269 GLGGMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 269 ~~~~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~~ 333 (466)
.........+.. ....|.|+|||||+ .++.++||++++......-+.+..+...++|+++.++.
T Consensus 157 ~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~-~~~~l~Gi~S~g~~c~~~p~vyt~v~~~~~WI~~~i~~ 225 (226)
T 4ag1_A 157 FRDFDHNLQLCVGNPRKTKSAFKGDSGGPLL-CAGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQA 225 (226)
T ss_dssp STTCCTTTEEEESCTTSCCBCCTTCTTCEEE-ETTEEEEEEEECBTTCCSCEEEEEHHHHHHHHHHHHHH
T ss_pred ccCcCccceEeeccCCCCCcCccCCCCCceE-EcCEEEEEEEECCCCCCCCCEEEEhHHHHHHHHHHHhc
Confidence 111112234443 23578999999999 47899999999865443367788899999999987653
No 36
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.56 E-value=2.2e-13 Score=128.39 Aligned_cols=181 Identities=19% Similarity=0.221 Sum_probs=115.7
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|..... .....|+|.+|+++ +|||+|||+.+ .+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~~~-----~~~~~CgGsLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 75 (224)
T 1cgh_A 12 RPYMAYLQIQSP-----AGQSRCGGFLVRED-FVLTAAHCWGS----------NINVTLGAHNIQRRENTQQHITARRAI 75 (224)
T ss_dssp STTEEEEEESTT-----TTSCEEEEEEEETT-EEEECGGGCCS----------SEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred CCcEEEEEEECC-----CCCeEEEEEEeeCC-EEEEhHHhCCC----------CCEEEEeecccCCCCCccEEEEEEEEE
Confidence 467788865321 11367999999998 99999999964 23444321 2455566555
Q ss_pred ecCC-------CCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC----CCceEEeEEeeeecCccCCC
Q 012318 206 ADFH-------SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDLG 269 (466)
Q Consensus 206 ~d~~-------~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~~ 269 (466)
.|+. +|||||+|+.+. .+.|+.|.... .+..|+.+++.||.... ...+....+.-+....|...
T Consensus 76 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~ 155 (224)
T 1cgh_A 76 RHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRI 155 (224)
T ss_dssp ECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHH
T ss_pred cCCCCCCCCCcCCEEEEEECCCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHH
Confidence 5553 599999999763 35566665433 35689999999997543 22344444433332222111
Q ss_pred CCCcc-ccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHH
Q 012318 270 LGGMR-REYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 270 ~~~~~-~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~ 332 (466)
++... ...+... ...|.|+|||||+- +|.++||++++......-+.+.-+....+|+++.++
T Consensus 156 ~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~~~~p~vyt~V~~~~~WI~~~~~ 223 (224)
T 1cgh_A 156 FGSYDPRRQICVGDRRERKAAFKGDSGGPLLC-NNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRTTMR 223 (224)
T ss_dssp CTTCCTTTEEEECCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECCTTCCSCEEEEEGGGGHHHHHHHHH
T ss_pred hCcCCCcceEeeccCCCCCeEeeCCCccceEE-ccEEEEEEEEECCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 11111 1244442 35799999999995 789999999976322334667888888899887664
No 37
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.55 E-value=6.5e-13 Score=124.75 Aligned_cols=181 Identities=20% Similarity=0.164 Sum_probs=117.9
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|.+|.|...... .....|+|.+|+++ +|||+|||+.. .+.|.+.. .+.+..+.+.
T Consensus 12 ~Pw~v~l~~~~~~----~~~~~CgGtLI~~~-~VLTAAhC~~~----------~~~v~~g~~~~~~~~~~~~~~~v~~~~ 76 (224)
T 3rp2_A 12 RPYMAHLDIVTEK----GLRVICGGFLISRQ-FVLTAAHCKGR----------EITVILGAHDVRKRESTQQKIKVEKQI 76 (224)
T ss_dssp CTTEEEEEEECTT----SCEEEEEEEESSSS-EEEECGGGCCS----------EEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred CCcEEEEEEecCC----CcEEEEEeEEeeCC-EEEEchhcCCC----------CcEEEEeccccCcCCCCcEEEEEEEEE
Confidence 5778888754322 11367999999988 99999999843 44554431 2345555556
Q ss_pred ecCC-------CCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccCC
Q 012318 206 ADFH-------SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSDL 268 (466)
Q Consensus 206 ~d~~-------~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~~ 268 (466)
.++. +|||||+|+.+. .+.++.|.... .+..|+.+++.||.... ...+....+..+....|..
T Consensus 77 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~ 156 (224)
T 3rp2_A 77 IHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVD 156 (224)
T ss_dssp ECTTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTT
T ss_pred ECCCccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhcc
Confidence 6653 699999999763 34556664432 35689999999997532 2234444444444444431
Q ss_pred CCCCccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHH
Q 012318 269 GLGGMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 269 ~~~~~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~ 331 (466)
.........+... ...|.|+|||||+- ++.++||++++......-+.+..+...++|+++.+
T Consensus 157 ~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~p~vyt~v~~y~~WI~~~i 223 (224)
T 3rp2_A 157 YRYYEYKFQVCVGSPTTLRAAFMGDSGGPLLC-AGVAHGIVSYGHPDAKPPAIFTRVSTYVPWINAVI 223 (224)
T ss_dssp TTCCCTTTEEEECCTTSCCBCCTTTTTCEEEE-TTEEEEEEEECCTTCCSCEEEEEHHHHHHHHHHHH
T ss_pred ccccCcCCEEEecCCCCCCeeccCCCCCeEEE-cceeeEEEEECCCCCCCCcEEEEHHHhHHHHHHHh
Confidence 1111112234332 35789999999994 78999999998654333567788999999998765
No 38
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.54 E-value=1.4e-13 Score=129.56 Aligned_cols=180 Identities=20% Similarity=0.312 Sum_probs=117.1
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC------CCcEEEEEEEEecC
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ------DGRTFEGTVLNADF 208 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~------~g~~~~a~vv~~d~ 208 (466)
.|..|.|... +...|+|++|+++ +|||+|||+.+.. ...+.|.+. +++.+..+-+..|+
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~v~~i~~hp 76 (224)
T 1pq7_A 12 FPFIVSISRN--------GGPWCGGSLLNAN-TVLTAAHCVSGYA------QSGFQIRAGSLSRTSGGITSSLSSVRVHP 76 (224)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECHHHHTTSC------GGGEEEEESCSBSSSSSEEECEEEEEECT
T ss_pred cCeEEEEEEC--------CCeEEEEEEecCC-EEEEcHHccCCCC------CCceEEEeCcceecCCCEEEEEEEEEECC
Confidence 4678888631 2367999999988 9999999997531 134566653 23456666666676
Q ss_pred C-----CCEEEEEeCCCC----CCCccccCC-CCCCCCCCEEEEEecCCCCC------CceEEeEEeeeecCccC--CCC
Q 012318 209 H-----SDIAIVKINSKT----PLPAAKLGT-SSKLCPGDWVVAMGCPHSLQ------NTVTAGIVSCVDRKSSD--LGL 270 (466)
Q Consensus 209 ~-----~DlAlLkv~~~~----~~~~~~l~~-s~~~~~G~~V~~iG~p~~~~------~~~t~G~Vs~~~~~~~~--~~~ 270 (466)
. +|||||+|+.+. .+.++.|.. ......|+.+++.||..... ..+....+.-+....|. +..
T Consensus 77 ~y~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~ 156 (224)
T 1pq7_A 77 SYSGNNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGT 156 (224)
T ss_dssp TCBTTBTCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCT
T ss_pred CCCCCCCCEEEEEeCCCCcCCCcccceecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcC
Confidence 4 599999999763 345666753 23457899999999975421 23444444433332221 110
Q ss_pred CCccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecCC--CeeeEEEeHHHHHHHHHH
Q 012318 271 GGMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQ 329 (466)
Q Consensus 271 ~~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~ 329 (466)
.......+.. ....|.|+|||||+..+|.++||++++..-. ..-+.+..+...++|+++
T Consensus 157 ~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~g~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 222 (224)
T 1pq7_A 157 SAITNQMFCAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDT 222 (224)
T ss_dssp TTSCTTEEEECCTTCCCBCCTTCTTCEEECTTCCEEEEEEECSSSSCTTCCEEEEETTTSHHHHHH
T ss_pred CCCCCCeEEeecCCCCCCCCcCCCCcceECcCCeEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHh
Confidence 1112234444 2457999999999977899999999975321 224566777778888775
No 39
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.53 E-value=7.1e-13 Score=125.04 Aligned_cols=181 Identities=18% Similarity=0.176 Sum_probs=114.7
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|..|.|...... ....|+|.+|+++ +|||+|||+.+ .+.|.+.. ++.+..+-+.
T Consensus 12 ~Pw~v~l~~~~~~-----~~~~CgGtLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 75 (227)
T 1iau_A 12 RPYMAYLMIWDQK-----SLKRCGGFLIRDD-FVLTAAHCWGS----------SINVTLGAHNIKEQEPTQQFIPVKRPI 75 (227)
T ss_dssp STTEEEEEEECSS-----CEEEEEEEEEETT-EEEECGGGCCS----------EEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred cCcEEEEEEECCC-----CceEEEEEEEcCC-EEEECHHhCCC----------ceEEEEccccccCCCCccEEEEEEEEE
Confidence 4778888643211 1367999999988 99999999964 34454421 2445555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccCC
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSDL 268 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~~ 268 (466)
.|+ .+|||||+|+.+. .+.|+.|.... .+..|+.+++.||.... ...+....+.-+....|..
T Consensus 76 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~ 155 (227)
T 1iau_A 76 PHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCES 155 (227)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHH
T ss_pred CCCCCCCCCCCCCeEEEEECCcccCCCceecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhh
Confidence 554 4699999999763 34566665433 34689999999997542 2234444443333222211
Q ss_pred CCCC--ccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHH
Q 012318 269 GLGG--MRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 269 ~~~~--~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~ 332 (466)
.+.. .....+... ...|.|+|||||+- +|.++||++++-.....-+.+..++...+|+++.++
T Consensus 156 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~gc~~~~~p~vyt~v~~~~~WI~~~~~ 225 (227)
T 1iau_A 156 DLRHYYDSTIELCVGDPEIKKTSFKGDSGGPLVC-NKVAQGIVSYGRNNGMPPRACTKVSSFVHWIKKTMK 225 (227)
T ss_dssp HTTTTCCTTTEEEESCTTSCCBCCTTCTTSEEEE-TTEEEEEEEEECTTSCSCEEEEEGGGGHHHHHHHHH
T ss_pred HhccccCCCcEEEeECCCCCCeeeecCCCchheE-eeEEEEEEeEecCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 1110 111144432 45789999999995 789999999983322234566888888999887664
No 40
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.52 E-value=6.3e-14 Score=131.12 Aligned_cols=165 Identities=16% Similarity=0.154 Sum_probs=103.7
Q ss_pred CceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC------CcEEEEEEEEecC--------CCCEEEEEeCC
Q 012318 154 RGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------GRTFEGTVLNADF--------HSDIAIVKINS 219 (466)
Q Consensus 154 ~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~------g~~~~a~vv~~d~--------~~DlAlLkv~~ 219 (466)
...|+|++|+++ +|||+|||+.+....... ..+.|.+.. +..+..+-+..|+ .+|||||+|+.
T Consensus 29 ~~~CgGtLIs~~-~VLTAAHCv~~~~~~~~~--~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~ 105 (215)
T 1p3c_A 29 GSSCTGTLIAPN-KILTNGHCVYNTASRSYS--AKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDT 105 (215)
T ss_dssp SCEEEEEEEETT-EEEECHHHHEETTTTEEC--CCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESS
T ss_pred CceEEEEEEeCC-EEEECccEeccCCCCccc--cceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECC
Confidence 367999999988 999999999763211000 111454422 2245555454433 56999999997
Q ss_pred C--CCCCccccCCCCCCCCCCEEEEEecCCCC----CCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCcccee
Q 012318 220 K--TPLPAAKLGTSSKLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPL 293 (466)
Q Consensus 220 ~--~~~~~~~l~~s~~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl 293 (466)
+ ..+.++.|... ....|+.++++||+... ........+..+....+ ........+|.|+|||||
T Consensus 106 ~~~~~v~pi~l~~~-~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~~c---------~~~~~~~~~C~GDSGgPl 175 (215)
T 1p3c_A 106 NIGNTVGYRSIRQV-TNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDT---------NLAYYTIDTFSGNSGSAM 175 (215)
T ss_dssp CHHHHHCCCCBCCC-SCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEECS---------SEEEECCCCCTTCTTCEE
T ss_pred CCcccceeeecCCC-cccCCCeEEEecCCCCCcccccceechhccCccCcccc---------hheeeccccCCCCCCCee
Confidence 4 22456666553 35689999999997421 11122222221211111 112236778999999999
Q ss_pred ecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHH
Q 012318 294 VNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 294 vd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~ 331 (466)
+..+|.++||++++......-+.+.-+....+|+++..
T Consensus 176 ~~~~g~lvGi~S~g~~c~~~p~v~t~v~~~~~WI~~~~ 213 (215)
T 1p3c_A 176 LDQNQQIVGVHNAGYSNGTINGGPKATAAFVEFINYAK 213 (215)
T ss_dssp ECTTSCEEEECCEEEGGGTEEEEEBCCHHHHHHHHHHH
T ss_pred EccCCeEEEEEecccCCCccCceeEechHHHHHHHHHh
Confidence 98789999999987653333455667788888888754
No 41
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.51 E-value=7.2e-13 Score=124.73 Aligned_cols=177 Identities=18% Similarity=0.247 Sum_probs=113.7
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCC----------cEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG----------RTFEGTVL 204 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g----------~~~~a~vv 204 (466)
.|..|.|... ....|+|.+|+++ +|||+|||+.+.. ...+.|.+... +.+..+.+
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~~------~~~~~V~~G~~~~~~~~~~~~~~~~v~~i 76 (225)
T 1a7s_A 12 FPFLASIQNQ--------GRHFCGGALIHAR-FVMTAASCFQSQN------PGVSTVVLGAYDLRRRERQSRQTFSISSM 76 (225)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECGGGC----------CCSEEEEESCSSTTSCCTTTCEEEEEEEE
T ss_pred CCcEEEEecC--------CCcEEEEEEeeCC-EEEEchhccCCCC------CCceEEEEeeeECCCCCCcceeEEeEEEE
Confidence 4677888642 2367999999988 9999999997631 13455555321 34444433
Q ss_pred Eec------CCCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCccCC
Q 012318 205 NAD------FHSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSDL 268 (466)
Q Consensus 205 ~~d------~~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~~ 268 (466)
..+ ..+|||||+|+.+. .+.++.|.... .+..|+.+++.||..... ..+....+.-+....+..
T Consensus 77 ~~h~y~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~ 156 (225)
T 1a7s_A 77 SENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRP 156 (225)
T ss_dssp ECSSCBTTTTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSCT
T ss_pred ecccccCCCCcCCEEEEEcCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhcc
Confidence 333 35799999999763 24566665432 346899999999976432 234444443333333321
Q ss_pred CCCCccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecC-CCeeeEEEeHHHHHHHHHHHHHcC
Q 012318 269 GLGGMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAA-ADGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 269 ~~~~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~-~~g~~~aip~~~i~~~l~~l~~~g 334 (466)
..+.. ....|.|+|||||+- +|.++||++++... ..+-+.+.-+...++|+++.++..
T Consensus 157 -------~~~Ca~~~~~~~~~C~GDSGgPl~~-~g~l~Gi~S~g~~~C~~~p~vyt~V~~~~~WI~~~~~~~ 220 (225)
T 1a7s_A 157 -------NNVCTGVLTRRGGICNGDGGTPLVC-EGLAHGVASFSLGPCGRGPDFFTRVALFRDWIDGVLNNP 220 (225)
T ss_dssp -------TEEEEECSSSSCBCCTTCTTCEEEE-TTEEEEEEEEECSSTTSSCEEEEEGGGGHHHHHHHHHSC
T ss_pred -------CceEEeccCCCCCcccCCCcchhee-CCEEEEEEEEccCCcCCCCcEEEEhHHhHHHHHHHhcCC
Confidence 23332 346799999999995 48999999998332 222567788889999999987765
No 42
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.51 E-value=2.5e-12 Score=120.56 Aligned_cols=176 Identities=22% Similarity=0.271 Sum_probs=112.0
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|..|.|..... .+...|+|.+|+++ +|||+|||+.+.. ...+.|.+.. .+.+....+.
T Consensus 12 ~Pw~v~l~~~~~-----~~~~~CgGtLIs~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 79 (221)
T 1fuj_A 12 RPYMASLQMRGN-----PGSHFCGGTLIHPS-FVLTAAHCLRDIP------QRLVNVVLGAHNVRTQEPTQQHFSVAQVF 79 (221)
T ss_dssp CTTEEEEEETTB-----TTCCCEEEEEEETT-EEEECGGGGSSSC------GGGEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred cCCEEEEEEecC-----CCCEEEEEEEecCC-EEEEchHhcCcCC------CCceEEEEeeeeccCCCCceEEEEEEEEE
Confidence 477888865321 12367999999988 9999999997632 1345565532 2344444333
Q ss_pred ec------CCCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCccCCC
Q 012318 206 AD------FHSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSDLG 269 (466)
Q Consensus 206 ~d------~~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~~~ 269 (466)
.+ ..+|||||+|+.+. .+.++.|.... .+..|+.+++.||..... ..+....+..+ ...+.
T Consensus 80 ~h~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~-- 156 (221)
T 1fuj_A 80 LNNYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TFFCR-- 156 (221)
T ss_dssp ECCCBTTTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CTTCC--
T ss_pred eCCCCCCCCcccEEEEEeCCccccCCcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-eeecC--
Confidence 32 35799999999763 35666675433 346799999999975432 22333333333 22221
Q ss_pred CCCccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEec---CCCeeeEEEeHHHHHHHHHHHH
Q 012318 270 LGGMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVA---AADGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 270 ~~~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~---~~~g~~~aip~~~i~~~l~~l~ 331 (466)
...+.. ....|.|+|||||+. +|.++||+++... ....-+.+..+....+|+++.+
T Consensus 157 -----~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i 220 (221)
T 1fuj_A 157 -----PHNICTFVPRRKAGICFGDSGGPLIC-DGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTL 220 (221)
T ss_dssp -----TTEEEEECSSSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred -----CceeeeccCCCCCCCCCCCCCCeeEE-CCEEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHh
Confidence 112332 346799999999995 7899999998431 1122456778888888888754
No 43
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.51 E-value=1.2e-12 Score=123.07 Aligned_cols=182 Identities=18% Similarity=0.149 Sum_probs=116.4
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|.+|.|...... .....|+|.+|+++ +|||+|||+.. .+.|.+.. ++.+..+-+.
T Consensus 12 ~Pw~v~l~~~~~~----~~~~~CgGtLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~~~ 76 (227)
T 3fzz_A 12 RPYMAYYEFLKVG----GKKMFCGGFLVRDK-FVLTAAHCKGR----------SMTVTLGAHNIKAKEETQQIIPVAKAI 76 (227)
T ss_dssp STTEEEEEEECSS----SCEEEEEEEEEETT-EEEECTTCCCE----------EEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred cCCEEEEEEEeCC----CceeEEEEEEEeCC-EEEECcccCCC----------CcEEEEcccccCCCCCCceEEEEEEEE
Confidence 4778888754321 12367999999988 99999999843 44555431 2345555566
Q ss_pred ecCC-------CCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccC-
Q 012318 206 ADFH-------SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD- 267 (466)
Q Consensus 206 ~d~~-------~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~- 267 (466)
.|+. +|||||+|+.+. .+.++.|.... .+..|+.+++.||.... ...+....+.-.....|.
T Consensus 77 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~ 156 (227)
T 3fzz_A 77 PHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCES 156 (227)
T ss_dssp ECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHH
T ss_pred ECcCCCCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhh
Confidence 6654 699999998753 34566665432 35689999999997532 223444444433322221
Q ss_pred -CCCCCccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHH
Q 012318 268 -LGLGGMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 268 -~~~~~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~ 332 (466)
+.........+.. ....|.|+|||||+- ++.++||++++......-+.+.-+...++|+++.++
T Consensus 157 ~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~-~~~l~Gi~S~g~~c~~~p~vyt~V~~~~~WI~~~i~ 226 (227)
T 3fzz_A 157 QFQSSYNRANEICVGDSKIKGASFEEDSGGPLVC-KRAAAGIVSYGQTDGSAPQVFTRVLSFVSWIKKTMK 226 (227)
T ss_dssp HHTTTCCTTTEEEECCCSSCBCCTTTTTTCEEEE-TTEEEEEEEECCTTCSSSEEEEEGGGTHHHHHHHHT
T ss_pred hhccccCCCceEEEeCCCCCCcccccCCccceEE-ecCCcEEEEECCCCCCCCeEEEEhHHhHHHHHHHHh
Confidence 1000111233433 245789999999994 689999999986544335677888888999988664
No 44
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.50 E-value=1.1e-12 Score=123.52 Aligned_cols=176 Identities=19% Similarity=0.208 Sum_probs=112.6
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~---------~g~~~~a~vv~ 205 (466)
.|-.|.|... +...|+|.+|+++ +|||+|||+.. .+.|.+. .++.+..+-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGsLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 72 (225)
T 1npm_A 12 QPWQAALFQG--------ERLICGGVLVGDR-WVLTAAHCKKQ----------KYSVRLGDHSLQSRDQPEQEIQVAQSI 72 (225)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECGGGCCS----------SCEEEESCSBTTC--CCCEEECEEEEE
T ss_pred cCcEEEEeeC--------CceEEEEEEECCC-EEEEhHHcCCC----------CceEEEeeeEcCCCCCCcEEEEEEEEE
Confidence 4667877531 2367999999988 99999999853 2233332 12344444444
Q ss_pred ecC----------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEeEEeeeecCc
Q 012318 206 ADF----------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKS 265 (466)
Q Consensus 206 ~d~----------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~ 265 (466)
.|+ .+|||||+|+.+. .+.|+.|... ....|+.++++||.... ...+....+.-+....
T Consensus 73 ~Hp~y~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~ 151 (225)
T 1npm_A 73 QHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANL-CPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNK 151 (225)
T ss_dssp ECTTCCSSCTTCCTTCCEEEEESSCCCCSSSSCCCEECSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHH
T ss_pred ECCCCCCCCccCccccEEEEeeCCcccCCCceeceECCCC-CCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHH
Confidence 443 3599999999763 3567777653 46789999999997541 2234444444333322
Q ss_pred cCCCCC-CccccEEEE----cccCCCCCccceeecCCCeEEEEEEeEecC---CCeeeEEEeHHHHHHHHHHHH
Q 012318 266 SDLGLG-GMRREYLQT----DCAINAGNSGGPLVNIDGEIVGINIMKVAA---ADGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 266 ~~~~~~-~~~~~~i~~----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~---~~g~~~aip~~~i~~~l~~l~ 331 (466)
|...+. ......+.. ....|.|+|||||+- +|+++||++++... ...-+.+.-+...++|+++.+
T Consensus 152 C~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 224 (225)
T 1npm_A 152 CERAYPGKITEGMVCAGSSNGADTCQGDSGGPLVC-DGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTM 224 (225)
T ss_dssp HHHHSTTTCCTTEEEEECTTCCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHHH
T ss_pred hhHHhCCCCCCCEEeecCCCCCeecCCCCCchheE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 211111 111234443 346799999999994 78999999997432 123466788999999988754
No 45
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.50 E-value=1.7e-12 Score=122.93 Aligned_cols=183 Identities=16% Similarity=0.168 Sum_probs=116.8
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-------C-cEEEEEEEEe
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------G-RTFEGTVLNA 206 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-------g-~~~~a~vv~~ 206 (466)
.|.+|.|.... .+...|+|.+|+++ ||||+|||+... ..+.+...+ . ..+..+.+..
T Consensus 12 ~Pw~v~l~~~~------~~~~~CgGtLI~~~-~VLTAAHC~~~~--------~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (238)
T 4e7n_A 12 HRFLVALYTSR------SRTLFCGGTLINQE-WVLTAAHCDRKN--------FRIKLGMHSKKVPNEDEQTRVPKEKFFC 76 (238)
T ss_dssp CTTEEEEECTT------TCCEEEEEEECSSS-EEEECGGGCCSS--------CEEEESCSCSSSCCTTCEEECEEEEECS
T ss_pred cCcEEEEEECC------CCCEEEEEEEecCC-EEEEhHHcCCCC--------CeEEeceeeccccCCCceeEeeeeeEEc
Confidence 57788886532 13367999999988 999999998642 233322211 1 1222333333
Q ss_pred cC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEeEEeeeecCccCCC
Q 012318 207 DF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSDLG 269 (466)
Q Consensus 207 d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~~~ 269 (466)
++ .+|||||+|+.+. .+.++.|.. .....|+.+++.||.... ...+....+..+....+...
T Consensus 77 h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~ 155 (238)
T 4e7n_A 77 LSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLPS-SPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAP 155 (238)
T ss_dssp STTCCCCSSSCCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTT
T ss_pred CCCCCCCCCCCcEEEEEeCCCccCCCceeeeeCCC-CCCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhh
Confidence 33 4699999999753 345666654 345679999999997532 22344455554444444322
Q ss_pred CC----CccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHHHHHcC
Q 012318 270 LG----GMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 270 ~~----~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~l~~~g 334 (466)
+. ......+.. ....|.|+|||||+ .+++++||++++.... ..-+.+.-+...++|+++.++..
T Consensus 156 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~-~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 231 (238)
T 4e7n_A 156 YPEFELPATSRTLCAGILEGGKDTCKGDSGGPLI-CNGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAGN 231 (238)
T ss_dssp CGGGCCCSCCSEEEEECTTCSCBCCTTCTTCEEE-ETTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTTC
T ss_pred cccccCCCCCCeEEeCCCCCCCccCCCCCCcceE-ECCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhcC
Confidence 21 111223433 24579999999999 4789999999985411 23466788889999999988765
No 46
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.50 E-value=1e-12 Score=124.63 Aligned_cols=180 Identities=18% Similarity=0.215 Sum_probs=114.7
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC-------CCcEEEEEEEEec
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ-------DGRTFEGTVLNAD 207 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~-------~g~~~~a~vv~~d 207 (466)
.|-.|.|... +...|+|.+|+++ +|||+|||+.+. ..+.+-.. .++.+..+-+..|
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGsLIs~~-~VLTAAHC~~~~--------~~v~~G~~~~~~~~~~~~~~~v~~~~~H 74 (237)
T 2zch_P 12 QPWQVLVASR--------GRAVCGGVLVHPQ-WVLTAAHCIRNK--------SVILLGRHSLFHPEDTGQVFQVSHSFPH 74 (237)
T ss_dssp CTTEEEEESS--------SSEEEEEEEEETT-EEEECGGGCCSS--------CEEEESCSBSSSCCTTCEEEEEEEEEEC
T ss_pred CCCEEEEeeC--------CCeEEEEEEecCC-EEEEcHHhcCCC--------ceEEEecccccCCCCCcEEEEEEEEecC
Confidence 4667888632 2367999999988 999999999752 22222111 2345555555544
Q ss_pred C------------------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEeEEe
Q 012318 208 F------------------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVS 259 (466)
Q Consensus 208 ~------------------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs 259 (466)
+ .+|||||+|+.+. .+.++.|.. .....|+.+++.||.... ...+....+.
T Consensus 75 p~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~Lp~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~ 153 (237)
T 2zch_P 75 PLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPT-QEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLH 153 (237)
T ss_dssp TTSCGGGGTSSSCCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCS-SCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEE
T ss_pred CCcchhhhcccccccCCCCCcceEEEEeCCCCccCCcEeeeECCC-CCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEE
Confidence 3 5699999999763 356677755 356789999999997532 2233444443
Q ss_pred eeecCccCCCCC-CccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHHH
Q 012318 260 CVDRKSSDLGLG-GMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQF 330 (466)
Q Consensus 260 ~~~~~~~~~~~~-~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~l 330 (466)
-+....|...+. ......+.. ....|.|+|||||+ .++.++||++++.... ..-+.+.-+...++|+++.
T Consensus 154 ~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~-~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 232 (237)
T 2zch_P 154 VISNDVCAQVHPQKVTKFMLCAGRWTGGKSTCSGDSGGPLV-CNGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDT 232 (237)
T ss_dssp EECHHHHHHHCSSBCCTTEEEEECTTCSCBCCTTCTTCEEE-SSSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred EeCHHHhcccccCCCCceEEeecCCCCCCcccCCCccCeEE-ECCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHH
Confidence 333322211011 111234443 24579999999999 4789999999976321 2346678888899999887
Q ss_pred HHc
Q 012318 331 KKN 333 (466)
Q Consensus 331 ~~~ 333 (466)
++.
T Consensus 233 i~~ 235 (237)
T 2zch_P 233 IVA 235 (237)
T ss_dssp HHT
T ss_pred Hhc
Confidence 653
No 47
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.50 E-value=5.5e-13 Score=125.93 Aligned_cols=180 Identities=18% Similarity=0.230 Sum_probs=113.9
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|.... +...|+|.+|+++ +|||+|||+... ..+.|.+.. .+.+..+.+.
T Consensus 12 ~Pw~v~l~~~~-------~~~~CgGtLI~~~-~VLTAAHC~~~~--------~~~~V~~G~~~~~~~~~~~~~~~v~~i~ 75 (228)
T 1fxy_A 12 VPWQALLINEE-------NEGFCGGTILSEF-YILTAAHCLYQA--------KRFKVRVGDRNTEQEEGGEAVHEVEVVI 75 (228)
T ss_dssp CTTEEEEECTT-------SCEEEEEEECSSS-EEEECGGGTTSC--------SSCEEEEECSCTTTCCCCEEEEEEEEEE
T ss_pred cCcEEEEEcCC-------CCeeEEEEEeeCC-EEEECHHHCCCC--------CcEEEEECccCccccCCCcEEEEEEEEE
Confidence 46677775321 2367999999988 999999999642 233444321 1334455555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEeEEeeeecCccCC
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSDL 268 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~~ 268 (466)
.|+ .+|||||+|+.+. .+.|+.|.. .....|+.+++.||.... ...+....+.-+....|..
T Consensus 76 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~ 154 (228)
T 1fxy_A 76 KHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPT-APPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEA 154 (228)
T ss_dssp ECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHH
T ss_pred ECCCCCCCCCcCcEEEEEECCcccCCCceeccCCCC-CCCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHh
Confidence 554 4699999999763 345666754 345689999999997532 2234444443333222211
Q ss_pred CCC-CccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHH
Q 012318 269 GLG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 269 ~~~-~~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~ 332 (466)
.+. ......+... ...|.|+|||||+- +|+++||++++..-. ..-+.+.-+....+|+++.++
T Consensus 155 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 225 (228)
T 1fxy_A 155 SYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVC-NGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIA 225 (228)
T ss_dssp HSTTTCCTTEEEESCTTCSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred hcCCCCCCCEEEeccCCCCCccccCccccceEE-CCEEEEEEEECCCCCCCCCCEEEEEhHHHHHHHHHHHh
Confidence 111 1112344432 35799999999994 789999999975321 234667888888999888664
No 48
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.50 E-value=6.6e-13 Score=125.65 Aligned_cols=180 Identities=15% Similarity=0.195 Sum_probs=114.3
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC--------CcEEEEEEEEe
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD--------GRTFEGTVLNA 206 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~--------g~~~~a~vv~~ 206 (466)
.|.+|.|.. +...|+|.+|+++ +|||+|||+.+. ..+.+...+ .+.+..+.+..
T Consensus 12 ~Pw~v~l~~---------~~~~CgGsLIs~~-~VLTAAHC~~~~--------~~v~~G~~~~~~~~~~~~~~~~v~~~~~ 73 (231)
T 2aiq_A 12 HRFLALVYA---------NGSLCGGTLINQE-WVLTARHCDRGN--------MRIYLGMHNLKVLNKDALRRFPKEKYFC 73 (231)
T ss_dssp CTTEEEEEE---------TTEEEEEEECSSS-EEEECGGGCCSS--------CEEEESCSCTTSCCTTCEEECEEEEECC
T ss_pred CCeEEEEEc---------CCCeEEEEEEeCC-EEEEcHHcCCCC--------CEEEEecccccccCCCceEEEEEEEEEE
Confidence 477788862 1256999999988 999999998752 223322211 12344444444
Q ss_pred cC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEeEEeeeecCccCCC
Q 012318 207 DF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSDLG 269 (466)
Q Consensus 207 d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~~~ 269 (466)
++ .+|||||+|+.+. .+.++.|... ....|+.++++||.... ...+....+..+....+...
T Consensus 74 hp~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~ 152 (231)
T 2aiq_A 74 LNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPSN-PPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAA 152 (231)
T ss_dssp SSCCSSSTTTTCCEEEEESSCCCCBTTBCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEEecCCCCCCCcEEeeECCCC-CCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhh
Confidence 43 4699999999763 3456777543 44679999999998532 22344444443333322211
Q ss_pred CCCccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHHHHHcC
Q 012318 270 LGGMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 270 ~~~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~l~~~g 334 (466)
+.......+.. ....|.|+|||||+- +|+++||++++.... ..-+.+..+....+|+++.++..
T Consensus 153 ~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~~ 224 (231)
T 2aiq_A 153 YKGLAATTLCAGILEGGKDTCKGDSGGPLIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISGN 224 (231)
T ss_dssp CTTCCSSEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred hcCCCcCcEEeccCCCCCcccCCcCCCcEEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcCC
Confidence 11112233433 245799999999995 689999999983221 22466788889999999987755
No 49
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.49 E-value=1.6e-12 Score=123.65 Aligned_cols=183 Identities=17% Similarity=0.202 Sum_probs=115.9
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|.+|.|... +...|+|.+|+++ +|||+|||+..... ...+.|.+.. .+.+..+.+.
T Consensus 14 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 79 (240)
T 1mza_A 14 RPFMASIQYG--------GHHVCGGVLIDPQ-WVLTAAHCQYRFTK-----GQSPTVVLGAHSLSKNEASKQTLEIKKFI 79 (240)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECGGGSCTTCS-----CSCEEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred CCeEEEEeeC--------CceEEEEEEecCC-EEEECHHhCCCCCC-----CCCeEEEeCceecCCCCCceEEEEEEEEE
Confidence 4778888632 2367999999988 99999999864211 1345555432 2345555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEeEEeeeecCccC-
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSD- 267 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~- 267 (466)
.++ .+|||||+|+.+. .+.++.|.....+..|+.+++.||.... ...+....+.-+....|.
T Consensus 80 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~ 159 (240)
T 1mza_A 80 PFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNS 159 (240)
T ss_dssp ECCCSSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTS
T ss_pred eCCCccCCCCCceEEEEEeCCCcccCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCC
Confidence 443 4799999999763 3556677553456789999999997532 233444444444333332
Q ss_pred -CCCC---CccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCC--CeeeEEEeHHH-HHHHHHHHHH
Q 012318 268 -LGLG---GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA--DGLSFAVPIDS-AAKIIEQFKK 332 (466)
Q Consensus 268 -~~~~---~~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~--~g~~~aip~~~-i~~~l~~l~~ 332 (466)
..+. ......+... ...|.|+|||||+- +|.++||++++..-. ..-+.+.-+.. ..+|+++.++
T Consensus 160 ~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~y~~WI~~~~~ 235 (240)
T 1mza_A 160 QSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLIC-KGVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNLV 235 (240)
T ss_dssp TTTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEE-TTEEEEEECSSCCSSCTTCCEEEEECCHHHHHHHHHHTC
T ss_pred cceeCCCCcCCCCeEeecCCCCCCccCCCCCCCeeEE-CCEEEEEEEECCCCCCCCCCcEEEeChHHHHHHHHHhcc
Confidence 1111 1122344432 46799999999994 789999999875321 22345566666 8888887654
No 50
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.49 E-value=4.3e-14 Score=128.03 Aligned_cols=129 Identities=22% Similarity=0.264 Sum_probs=84.6
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCCEE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIA 213 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~DlA 213 (466)
..+-+|.|.... .+.|+||.|+.+++||||+|||.+. +. +...+|.+|. +.+|+..|+|
T Consensus 17 ~~~N~v~V~G~~--------~GsGt~F~i~g~~~VvTA~HVVg~~---------~~-vVt~~g~r~~---~~f~~~~D~A 75 (213)
T 3fan_A 17 PSLNTVNVVGSS--------MGSGGVFTIDGKIKCVTAAHVLTGN---------SA-RVSGVGFNQM---LDFDVKGDFA 75 (213)
T ss_dssp CCTTEEEEESSS--------EEEEEEEEETTEEEEEEEGGGSBTT---------EE-EEEETTEEEE---EECEEETTEE
T ss_pred CCCCeEEEeecC--------CCceEEEEECCcEEEEEeccEeCCC---------CE-EEecCCcEEE---EEecCCCcEE
Confidence 345567776432 3679999998777999999999874 44 4446666664 4779999999
Q ss_pred EEEeCC-CCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccce
Q 012318 214 IVKINS-KTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGP 292 (466)
Q Consensus 214 lLkv~~-~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGP 292 (466)
++++.. ...+|.++++... ..|...++.-+ ....|.+. . ...+.. .++||||||
T Consensus 76 ll~i~~~~g~~P~lKlA~~~--~~G~a~~~~~~------gv~~G~i~----~----------~~al~~---T~pGdSGsP 130 (213)
T 3fan_A 76 IADCPNWQGVAPKAQFCEDG--WTGRAYWLTSS------GVEPGVIG----N----------GFAFCF---TACGDSGSP 130 (213)
T ss_dssp EEECTTCCSCCCBCCBCCTT--CCEEEEEEETT------EEEEEEEE----T----------TEEEES---SCCCSTTCE
T ss_pred EEEccCcCCCCCcceeeeee--ccCceEEEEcc------Cccccccc----c----------CCEEEe---cCCCCCCCc
Confidence 999964 5678888886422 22222222211 12233331 0 012222 268999999
Q ss_pred eecCCCeEEEEEEeEe
Q 012318 293 LVNIDGEIVGINIMKV 308 (466)
Q Consensus 293 lvd~~G~VVGI~~~~~ 308 (466)
|+|.+|+|||||...-
T Consensus 131 Vvn~dG~VIGVHt~s~ 146 (213)
T 3fan_A 131 VITEAGELVGVHTGSN 146 (213)
T ss_dssp EEETTSCEEEEEEC--
T ss_pred cCCCCCcEEEEEeccC
Confidence 9999999999998753
No 51
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.49 E-value=1.5e-12 Score=122.64 Aligned_cols=181 Identities=18% Similarity=0.273 Sum_probs=114.4
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-+|.|... +...|+|.+|+++ +|||+|||+.+.. ...+.|.+.. .+.+...-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 76 (228)
T 2xw9_A 12 RPYMASVQLN--------GAHLCGGVLVAEQ-WVLSAAHCLEDAA------DGKVQVLLGAHSLSQPEPSKRLYDVLRAV 76 (228)
T ss_dssp CTTEEEEEET--------TEEEEEEEEEETT-EEEECGGGGSSCT------TCCEEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred CCcEEEEEEC--------CCeEEEEEEEeCC-EEEEcHHhCCCCC------CCceEEEEcccccCCCCCcceEEEEEEEE
Confidence 4678888642 2367999999988 9999999997532 1356666532 2345555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCC-CCCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCccCC
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSDL 268 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~~ 268 (466)
.|+ .+|||||+|+.+. .+.|+.|... ..+..|+.+.+.||..... ..+....+.-+....|..
T Consensus 77 ~hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~ 156 (228)
T 2xw9_A 77 PHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNR 156 (228)
T ss_dssp ECTTCCTTCCTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTS
T ss_pred eCCCCCCCCCCCcEEEEEeCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcC
Confidence 554 4699999999763 3455666542 3456899999999975422 233333333333222221
Q ss_pred CCC---CccccEEEE---cccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHHHH
Q 012318 269 GLG---GMRREYLQT---DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 269 ~~~---~~~~~~i~~---~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~l~ 331 (466)
.+. ......+.. ....|.|+|||||+- +|.++||++++.... ..-+.+..+...++|+++.+
T Consensus 157 ~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgPL~~-~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 227 (228)
T 2xw9_A 157 RTHHDGAITERLMCAESNRRDSCKGDAGGPLVC-GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227 (228)
T ss_dssp TTTTTTCCCTTEEEECCSSCBCCTTCTTCEEEE-TTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHH
T ss_pred ccccCCcccCCEEecCCCCCccCCCCCcccEEE-CCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 111 112234443 245799999999995 789999999875221 23456788888888888764
No 52
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.49 E-value=1.3e-12 Score=123.02 Aligned_cols=176 Identities=17% Similarity=0.240 Sum_probs=113.5
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~---------~g~~~~a~vv~ 205 (466)
.|..|.|.. +...|+|.+|+++ +|||+|||+.. .+.|.+. .++.+..+-+.
T Consensus 12 ~Pw~v~l~~---------~~~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 71 (222)
T 1hj8_A 12 QPHQVSLNS---------GYHFCGGSLVNEN-WVVSAAHCYKS----------RVEVRLGEHNIKVTEGSEQFISSSRVI 71 (222)
T ss_dssp CTTEEEEES---------SSEEEEEEEEETT-EEEECGGGCCS----------SCEEEESCSBTTSCCSCCEEEEEEEEE
T ss_pred CCEEEEEEc---------CCcEEEeEEecCC-EEEECHHhcCC----------CeEEEEcccccccCCCCcEEEEEEEEE
Confidence 467788852 2367999999988 99999999963 1223322 23445555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCccCCC
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSDLG 269 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~~~ 269 (466)
.|+ .+|||||+|+.+. .+.|+.|... .+..|+.+++.||..... ..+....+..+....|...
T Consensus 72 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 150 (222)
T 1hj8_A 72 RHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTS-CAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNS 150 (222)
T ss_dssp ECTTCBTTTTBSCCEEEEESSCCCCSSSCCCCBCCSS-CCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHH
T ss_pred ECCCCCCCCCCCcEEEEEECCcccCCCceeccCCCCC-CCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhh
Confidence 554 4699999999763 3567777553 467899999999976422 2344444433332222111
Q ss_pred CC-CccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHH
Q 012318 270 LG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 270 ~~-~~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~ 332 (466)
+. ......+... ...|.|+|||||+- +|+++||++++..-. ..-+.+.-+...++|+++.++
T Consensus 151 ~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~~~WI~~~~~ 220 (222)
T 1hj8_A 151 YPGMITNAMFCAGYLEGGKDSCQGDSGGPVVC-NGELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMA 220 (222)
T ss_dssp STTCCCTTEEEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred ccCCCCCCeEEeccCCCCCccCCCCcccceEE-CCEEEEEEeecCCCCCCCcCcEEEEhHHhHHHHHHHhh
Confidence 11 1122344432 35799999999994 789999999975421 234667888888899887654
No 53
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.49 E-value=6.9e-13 Score=125.15 Aligned_cols=179 Identities=21% Similarity=0.229 Sum_probs=114.0
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|..|.|... +...|+|.+|+++ +|||+|||+.+. ..+.|.+.. ...+..+-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 74 (226)
T 1azz_A 12 WPHQAALFID--------DMYFCGGSLISPE-WILTAAHCMDGA--------GFVDVVLGAHNIREDEATQVTIQSTDFT 74 (226)
T ss_dssp STTEEEEEET--------TTEEEEEEEEETT-EEEECHHHHTTC--------SCEEEEESCSBSSSCCTTCEEEEECCEE
T ss_pred cCCEEEEEEC--------CcEEEEEEEecCC-EEEEhHHhcCCC--------CceEEEEcceEcCCCCCccEEEEEEEEE
Confidence 4677888641 2367999999988 999999999763 345555432 2334444444
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC------CceEEeEEeeeecCccCC
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ------NTVTAGIVSCVDRKSSDL 268 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~------~~~t~G~Vs~~~~~~~~~ 268 (466)
.|+ .+|||||+|+.+. .+.++.|.... ...|+.+++.||..... ..+....+.-+....|..
T Consensus 75 ~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~ 153 (226)
T 1azz_A 75 VHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTD-VGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDA 153 (226)
T ss_dssp ECTTCBTTTTBSCCEEEECSSCCCCCSSSCCCBCCSSC-CCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHH
T ss_pred ECCCCCCCCCCCceEEEEECCccccCCCcccccCCCCC-CCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhh
Confidence 444 4699999999763 35667775533 47899999999975322 233333333333222211
Q ss_pred CCCCccccEEEEc----ccCCCCCccceeecCCCeEEEEEEeEec-C-C-CeeeEEEeHHHHHHHHHHHHH
Q 012318 269 GLGGMRREYLQTD----CAINAGNSGGPLVNIDGEIVGINIMKVA-A-A-DGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 269 ~~~~~~~~~i~~~----~~i~~G~SGGPlvd~~G~VVGI~~~~~~-~-~-~g~~~aip~~~i~~~l~~l~~ 332 (466)
.++......+... ...|.|+|||||+ .+|.++||++++.. . . ..-+.+..+...++|+++..+
T Consensus 154 ~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~-~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~~ 223 (226)
T 1azz_A 154 VYGIVTDGNICIDSTGGKGTCNGDSGGPLN-YNGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQTG 223 (226)
T ss_dssp HHSCCCTTEEEECCTTTCBCCTTCTTCEEE-ETTEEEEEEEEEETTCTTSCCCEEEEESGGGHHHHHHHHC
T ss_pred hhCcCCCceEeecCCCCCccCCCCCCcceE-ECCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHhC
Confidence 0111112344432 3579999999999 57899999999863 1 1 223566778888899887654
No 54
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.48 E-value=7.5e-13 Score=124.49 Aligned_cols=181 Identities=20% Similarity=0.240 Sum_probs=116.0
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC------CcEEEEEEEEecC
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------GRTFEGTVLNADF 208 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~------g~~~~a~vv~~d~ 208 (466)
.|-.|.|... +...|+|.+|+++ +|||+|||+.+... ...+.|.+.. ++.+..+-+..++
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~v~~~~~hp 77 (222)
T 1eq9_A 12 YPYQVSLRLS--------GSHRCGASILDNN-NVLTAAHCVDGLSN-----LNRLKVHVGTNYLSESGDVYDVEDAVVNK 77 (222)
T ss_dssp CTTEEEEEET--------TEEEEEEEECSSS-EEEECHHHHTTCSC-----GGGEEEEESCSBTTSCCEEEEEEEEEECT
T ss_pred cceEEEEEeC--------CCeEEEEEEeeCC-EEEEhhhcCCCCCC-----CceEEEEECceecCCCCeEEEEEEEEECC
Confidence 4677888632 2367999999988 99999999975321 1345666532 3456666555554
Q ss_pred -------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccC-CCCC
Q 012318 209 -------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD-LGLG 271 (466)
Q Consensus 209 -------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~-~~~~ 271 (466)
.+|||||+|+.+. .+.|+.|........|+.+++.||.... ...+....+.-+....|. ..+.
T Consensus 78 ~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 157 (222)
T 1eq9_A 78 NYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR 157 (222)
T ss_dssp TCBTTTTBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSS
T ss_pred CCCCCCCCCCEEEEEECCccccCCceEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCC
Confidence 4699999999763 3567777654443678999999997542 123344444333332222 1111
Q ss_pred CccccEEEE----cccCCCCCccceeecCCCeEEEEEEeEecCC-CeeeEEEeHHHHHHHHHHHH
Q 012318 272 GMRREYLQT----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA-DGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 272 ~~~~~~i~~----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~-~g~~~aip~~~i~~~l~~l~ 331 (466)
.....+.. ....|.|+|||||+- +|.++||++++..-. ..-+.+.-+....+|+++.+
T Consensus 158 -~~~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~~~p~vyt~V~~~~~WI~~~~ 220 (222)
T 1eq9_A 158 -VIDSHICTLTKRGEGACHGDSGGPLVA-NGAQIGIVSFGSPCALGEPDVYTRVSSFVSWINANL 220 (222)
T ss_dssp -CCTTEEEECCCTTCBCCTTCTTCEEEE-TTEEEEEEEECSTTTSSSCEEEEEGGGGHHHHHHTS
T ss_pred -CCccEEeecCCCCCeeeeCCccceEEE-CCEEEEEEEECCCcCCCCCCEEEEHHHHHHHHHHHh
Confidence 11233443 235799999999995 789999999975322 23456677888888887643
No 55
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.48 E-value=3.3e-12 Score=120.67 Aligned_cols=181 Identities=17% Similarity=0.164 Sum_probs=116.2
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC--------CcE--EEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD--------GRT--FEGTVL 204 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~--------g~~--~~a~vv 204 (466)
.|..|.|.... .+...|+|.+|+++ ||||+|||+.. .+.|.+.. ... +....+
T Consensus 12 ~Pw~v~l~~~~------~~~~~CgGtLI~~~-~VLTAAHC~~~----------~~~v~~g~~~~~~~~~~~~~~~~~~~~ 74 (234)
T 3s9c_A 12 HPFLVALYTSA------SSTIHCAGALINRE-WVLTAAHCDRR----------NIRIKLGMHSKNIRNEDEQIRVPRGKY 74 (234)
T ss_dssp CTTEEEEEETT------EEEEEEEEEEEETT-EEEECGGGCCT----------TEEEEESCSSSSSCCTTCEEECEEEEE
T ss_pred CCeEEEEEECC------CCcEEEeeEEeeCC-EEEEchhhcCC----------CceEEEeecccccccCCcceEEeeeEE
Confidence 57788886432 12356999999988 99999999864 23333321 111 222333
Q ss_pred EecC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC----CCceEEeEEeeeecCccCCC
Q 012318 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDLG 269 (466)
Q Consensus 205 ~~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~~ 269 (466)
..++ .+|||||+|+.+. .+.++.|... ....|+.++++||.... ...+....+..+....+...
T Consensus 75 ~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~ 153 (234)
T 3s9c_A 75 FCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSR-SRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPL 153 (234)
T ss_dssp CCSSCSSTTCGGGCCEEEEESSCCCCBTTBCCCBCCSS-CCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTT
T ss_pred EeCCCCCCCCCcCceEEEEECCccccCCcccccccCCC-CCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhc
Confidence 3233 3599999999753 4556777543 45669999999997532 22344444444444444322
Q ss_pred CC--CccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHHHHHcC
Q 012318 270 LG--GMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 270 ~~--~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~l~~~g 334 (466)
+. ......+.. ....|.|+|||||+ .+++++||++++.... ..-+.+.-+...++|+++.++..
T Consensus 154 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~-~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~ 227 (234)
T 3s9c_A 154 YPWVPADSRTLCAGILKGGRDTCHGDSGGPLI-CNGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGN 227 (234)
T ss_dssp CTTSCTTSSEEEEECTTSSCBCCTTCTTCEEE-ETTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred ccCCCCCcceEEeecCCCCCccCCCCCCCeEE-EeCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCC
Confidence 21 112234443 34579999999999 4789999999985422 23467788899999999988766
No 56
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.48 E-value=1.4e-12 Score=123.71 Aligned_cols=189 Identities=16% Similarity=0.187 Sum_probs=116.0
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC----------CCcEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ----------DGRTFEGTVL 204 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~----------~g~~~~a~vv 204 (466)
.|..|.|.... ....|+|.+|+++ +|||+|||+.+...........+.|.+. ..+.+..+-+
T Consensus 12 ~Pw~v~l~~~~-------~~~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i 83 (241)
T 3ncl_A 12 WPWQVSLHALG-------QGHICGASLISPN-WLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRI 83 (241)
T ss_dssp STTEEEEEETT-------TEEEEEEEECSSS-EEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEEE
T ss_pred CCcEEEEEcCC-------CceEEEEEEeeCC-EEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEEE
Confidence 46778886432 1257999999988 9999999996532222222345556543 1245556666
Q ss_pred EecC-------CCCEEEEEeCCCC----CCCccccCCC-CCCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccC
Q 012318 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD 267 (466)
Q Consensus 205 ~~d~-------~~DlAlLkv~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~ 267 (466)
..++ .+|||||+|+.+. .+.++.|... ..+..|+.+++.||.... ...+....+..+....|.
T Consensus 84 ~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~ 163 (241)
T 3ncl_A 84 ISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCE 163 (241)
T ss_dssp EECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHHH
T ss_pred EECCCCCCCCCCCcEEEEEECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHhh
Confidence 6665 5699999999753 3456666543 235579999999997532 123444444333332222
Q ss_pred CCCC-CccccEEEE-----cccCCCCCccceee--cCCCe--EEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHH
Q 012318 268 LGLG-GMRREYLQT-----DCAINAGNSGGPLV--NIDGE--IVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 268 ~~~~-~~~~~~i~~-----~~~i~~G~SGGPlv--d~~G~--VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~ 331 (466)
..+. ......+.. ....|.|+|||||+ +.+|+ ++||++++..-. ..-+.+.-+...++|+++..
T Consensus 164 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~~~ 239 (241)
T 3ncl_A 164 NLLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENT 239 (241)
T ss_dssp HHSTTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHHHH
T ss_pred hhcccCCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 1111 111233443 23579999999998 33564 899999975421 23456677888888887653
No 57
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.48 E-value=2.1e-12 Score=121.90 Aligned_cols=180 Identities=19% Similarity=0.176 Sum_probs=113.1
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|..|.|..... .....|+|.+|+++ +|||+|||+.. .+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~~~-----~~~~~CgGsLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 75 (227)
T 1euf_A 12 RPYMAFLLFKTS-----GKSHICGGFLVRED-FVLTAAHCLGS----------SINVTLGAHNIMERERTQQVIPVRRPI 75 (227)
T ss_dssp CTTEEEEEEESS-----SSEEEEEEEEEETT-EEEECGGGCCE----------EEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred cCCEEEEEEeCC-----CCceEEEEEEeeCC-EEEECHHHCCC----------CcEEEEcccccCCCCCccEEEEEEEEE
Confidence 477888864321 11367999999988 99999999964 34444421 2445555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccCC
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSDL 268 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~~ 268 (466)
.|+ .+|||||+|+.+. .+.|+.|.... .+..|+.+.+.||.... ...+....+.-+....|..
T Consensus 76 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~ 155 (227)
T 1euf_A 76 PHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIA 155 (227)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHT
T ss_pred eCCCCCCCCCcCceEEEEECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhH
Confidence 554 4699999999753 35566665432 35689999999997532 1234444444333333321
Q ss_pred CCCC-ccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHH
Q 012318 269 GLGG-MRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 269 ~~~~-~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~ 331 (466)
.+.. .....+... ...+.|+|||||+- +|.++||++++......-+.+.-+....+|+++.+
T Consensus 156 ~~~~~~~~~~~Ca~~~~~~~~~~~GDsGgPL~~-~~~l~Gi~S~gc~~~~~p~vyt~V~~y~~WI~~~~ 223 (227)
T 1euf_A 156 RFKNYIPFTQICAGDPSKRKNSFSGDSGGPLVC-NGVAQGIVSYGRNDGTTPDVYTRISSFLSWIHSTM 223 (227)
T ss_dssp TCTTCCTTTEEEESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECCTTCCSCEEEEEGGGTHHHHHHHT
T ss_pred hhcCcCCCcEEEccCCCCCCcccccCCCCceEE-CCEEEEEEEEeCCCCCCCeEEEEHHHhHHHHHHHH
Confidence 1111 112344432 23458999999994 78999999997432223456677888888887754
No 58
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.48 E-value=6.1e-12 Score=119.61 Aligned_cols=185 Identities=15% Similarity=0.129 Sum_probs=120.2
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-----------CcEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-----------GRTFEGTV 203 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-----------g~~~~a~v 203 (466)
.|..|.|... +...|+|.+|+++ +|||+|||+.+.. ...+.|.+.. .+.+..+-
T Consensus 11 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~~~~~~v~~ 75 (240)
T 1si5_H 11 IGWMVSLRYR--------NKHICGGSLIKES-WVLTARQCFPSRD------LKDYEAWLGIHDVHGRGDEKCKQVLNVSQ 75 (240)
T ss_dssp CTTEEEEEES--------SSEEEEEEEEETT-EEEEEGGGCSSSC------GGGEEEEESCSBSSCSTTTTTCEEEEEEE
T ss_pred CCeEEEEEeC--------CCeEEEEEEeeCC-EEEEhHHhcCCCC------CccEEEEEeeeecCCCCCCCcceEEEEEE
Confidence 4778888643 2367999999998 9999999997532 1345565532 23344444
Q ss_pred EEecC-CCCEEEEEeCCCC----CCCccccCCC-CCCCCCCEEEEEecCCCC----CCceEEeEEeeeecCccCCCCCC-
Q 012318 204 LNADF-HSDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDLGLGG- 272 (466)
Q Consensus 204 v~~d~-~~DlAlLkv~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~~~~~- 272 (466)
+.+++ .+|||||+|+.+. .+.++.|... ..+..|+.++++||.... ...+....+..+....|...+..
T Consensus 76 ~~~~p~~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 155 (240)
T 1si5_H 76 LVYGPEGSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGK 155 (240)
T ss_dssp EEECSSTTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-----
T ss_pred EEcCCCCCcEEEEEECCccccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCC
Confidence 44554 7899999999763 3556666543 245679999999997643 23445555554444444322111
Q ss_pred --ccccEEEE-----cccCCCCCccceeecCCC---eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHHcC
Q 012318 273 --MRREYLQT-----DCAINAGNSGGPLVNIDG---EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 273 --~~~~~i~~-----~~~i~~G~SGGPlvd~~G---~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~~g 334 (466)
.....+.. ....|.|+|||||+-.++ .++||++++..-. ..-+.+..+....+|+++.++..
T Consensus 156 ~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~~~ 229 (240)
T 1si5_H 156 VTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIILTY 229 (240)
T ss_dssp --CCTTEEEEECSSSCCBCCTTCTTCEEEEECSSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHSSC
T ss_pred ccCCCCEEeecCCCCCCEeccCCCCCcEEEEECCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHhcc
Confidence 11233433 246799999999994432 8999999875321 23466788889999999988665
No 59
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.47 E-value=3.3e-12 Score=120.95 Aligned_cols=178 Identities=19% Similarity=0.253 Sum_probs=113.0
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|.+|.|... +...|+|.+|+++ +|||+|||+.+. ...|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~---------~~~v~~G~~~~~~~~~~~~~~~v~~~~ 73 (234)
T 1orf_A 12 RPYMVLLSLD--------RKTICAGALIAKD-WVLTAAHCNLNK---------RSQVILGAHSITREEPTKQIMLVKKEF 73 (234)
T ss_dssp STTEEEEECS--------SSCEEEEEEEETT-EEEECTTCCCCT---------TCEEEESCSBSSSCCTTCEEECEEEEE
T ss_pred CCeEEEEccC--------CceEEEEEEeeCC-EEEEchhcCCCC---------CceEEEeccccCcCCCceEEEEEEEEE
Confidence 4678888642 2367999999988 999999999652 23343321 2345555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccC-
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD- 267 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~- 267 (466)
.|+ .+|||||+|+.+. .+.++.|.... .+..|+.+++.||.... ...+....+.-+....|.
T Consensus 74 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 153 (234)
T 1orf_A 74 PYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCND 153 (234)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTS
T ss_pred cCCCCCCCCCCCCEEEEEECCcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCC
Confidence 554 4699999999763 34566665432 34689999999997532 233444455444433332
Q ss_pred -CCCCCccc----cEEEE-----cccCCCCCccceeecCCCeEEEEEEeEe--cCC--CeeeEEEeHH-HHHHHHHHHHH
Q 012318 268 -LGLGGMRR----EYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKV--AAA--DGLSFAVPID-SAAKIIEQFKK 332 (466)
Q Consensus 268 -~~~~~~~~----~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~--~~~--~g~~~aip~~-~i~~~l~~l~~ 332 (466)
..+. ... ..+.. ....|.|+|||||+- +|.++||++++. .-. ..-+.+.-+. ...+|+++.++
T Consensus 154 ~~~~~-~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~~ 231 (234)
T 1orf_A 154 RNHYN-FNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLC-EGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIK 231 (234)
T ss_dssp TTTTT-TTTCCCTTEEEEECSSCCCBCCTTCTTCEEEE-TTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHHC
T ss_pred ccccc-cCCccCCCEEEecCCCCCCcCCCCCCCCeEEE-CCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHHH
Confidence 1111 111 34443 235799999999994 789999999976 211 2235566676 78888887654
No 60
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.47 E-value=2.3e-12 Score=121.64 Aligned_cols=181 Identities=16% Similarity=0.177 Sum_probs=113.5
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-------Cc-EEEEEEEEe
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GR-TFEGTVLNA 206 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-------g~-~~~a~vv~~ 206 (466)
.|.+|.|... +...|+|.+|+++ ||||+|||+... ..+.+...+ .. ....+.+..
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~--------~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 74 (234)
T 3s69_A 12 HRSLVAFFNS--------TGFFCSGTLINEE-WVLTAAHCDNTN--------FQMKLGVHSKKVLNEDEQTRNPKEKFIC 74 (234)
T ss_dssp CTTEEEEECS--------SCEEEEEEEEETT-EEEECGGGCCSS--------CEEEESCCCSSSCCTTCEEECEEEEEEC
T ss_pred CceEEEEeeC--------CCeEEeEEEeeCC-EEEEchhhCCCC--------ceEEecccccccccCCcceeeceEEEEC
Confidence 5778888642 2367999999988 999999998642 222222211 11 122333333
Q ss_pred cC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEeEEeeeecCccCCC
Q 012318 207 DF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSDLG 269 (466)
Q Consensus 207 d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~~~ 269 (466)
++ .+|||||+|+.+. .+.++.|.. .....|+.+++.||.... ........+..+....+...
T Consensus 75 h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~ 153 (234)
T 3s69_A 75 PNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPS-SPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAG 153 (234)
T ss_dssp TTCCTTCTTSSCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHH
T ss_pred CCccCCCCCcccEEEEeeCCcCCCCCcceeeecCC-CCCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhh
Confidence 33 4699999999753 345666654 345679999999997532 12334444443333322211
Q ss_pred CC--CccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHHHHHcC
Q 012318 270 LG--GMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 270 ~~--~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~l~~~g 334 (466)
+. ......+.. ....|.|+|||||+ .+++++||++++.... ..-+.+.-+...++|+++.++..
T Consensus 154 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~-~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 227 (234)
T 3s69_A 154 YPELLTEYRTLCAGILEGGKDTCGGDSGGPLI-CNGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAGN 227 (234)
T ss_dssp CTTCCTTSCEEEEECTTCSCBCCTTCTTCEEE-ETTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred cccccCCcceEeccCCCCCCccCCCCCccceE-EcCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcCC
Confidence 11 111223433 34679999999999 4789999999985421 22466788899999999988765
No 61
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.47 E-value=7e-13 Score=125.85 Aligned_cols=177 Identities=18% Similarity=0.159 Sum_probs=111.3
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|..|.|... +...|+|.+|+++ +|||+|||+.. .+.|.+.. ++.+..+-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~~~ 72 (237)
T 1gvz_A 12 KPWQVAVYHQ--------GHFQCGGVLVHPQ-WVLTAAHCMSD----------DYQIWLGRHNLSKDEDTAQFHQVSDSF 72 (237)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECGGGCCS----------SCEEEESCSBTTSCCTTCEEECEEEEE
T ss_pred CCeEEEEeeC--------CceEEEeEEeeCC-EEEEcHHhCCC----------CCeEEEeecccccCCCCceEEEeeeEe
Confidence 4677888632 2357999999988 99999999952 22333321 2344455455
Q ss_pred ecC------------------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC-C-----CceEEeE
Q 012318 206 ADF------------------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL-Q-----NTVTAGI 257 (466)
Q Consensus 206 ~d~------------------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~-~-----~~~t~G~ 257 (466)
.|+ .+|||||+|+.+. .+.++.|... ....|+.++++||.... . ..+....
T Consensus 73 ~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~ 151 (237)
T 1gvz_A 73 LDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQ-EPKLGSTCYTSGWGLISTFTNRGSGTLQCVE 151 (237)
T ss_dssp ECTTSCGGGGGCSSCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCSS-CCCTTCEEEEEEEECSCTTTCSEEEEEEEEE
T ss_pred cCCccCcccccccccccccccCCceEEEEeCCCcccCCcEeeeECCCC-CCCCCCEEEEECCCcccCCCCCCCCccEEEE
Confidence 443 6799999999763 3456777553 46789999999997642 1 1233333
Q ss_pred EeeeecCccCCCCCC-ccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHH
Q 012318 258 VSCVDRKSSDLGLGG-MRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIE 328 (466)
Q Consensus 258 Vs~~~~~~~~~~~~~-~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~ 328 (466)
+.-+....|...+.. .....+... ...|.|+|||||+- +|.++||++++.... ..-+.+.-+....+|++
T Consensus 152 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~ 230 (237)
T 1gvz_A 152 LRLQSNEKCARAYPEKMTEFVLCATHRDDSGSICLGDSGGALIC-DGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIK 230 (237)
T ss_dssp EEEECGGGGCSSCGGGCCTTEEEEECSSTTCEECGGGTTCEEEE-TTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHH
T ss_pred EeEeChhHhhhhhhhcCCCceEEEeeCCCCCccCCCCccCcEee-CCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHH
Confidence 333333333322211 112334432 24699999999994 799999999875211 12345677778888888
Q ss_pred HHHH
Q 012318 329 QFKK 332 (466)
Q Consensus 329 ~l~~ 332 (466)
+.++
T Consensus 231 ~~~~ 234 (237)
T 1gvz_A 231 ETIE 234 (237)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
No 62
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.47 E-value=5.1e-12 Score=119.76 Aligned_cols=186 Identities=15% Similarity=0.125 Sum_probs=117.7
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|.... .....|+|.+|+++ +|||+|||+.+.. ...+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~~------~~~~~CgGtLIs~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 78 (238)
T 1ym0_A 12 FPWQVSVRRKS------SDSHFCGGSIINDR-WVVCAAHCMQGEA------PALVSLVVGEHDSSAASTVRQTHDVDSIF 78 (238)
T ss_dssp STTEEEEEEGG------GTEEEEEEEEEETT-EEEECHHHHTTCC------GGGEEEEESCSBTTSCCSSCEEEEEEEEE
T ss_pred cCCEEEEEeCC------CCceEEEEEEeeCC-EEEECHHhCCCCC------CceEEEEEcccccCCCCCCceEEEEEEEE
Confidence 46788887532 12367999999988 9999999997631 2356666532 2345555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEeEEeeeecCccC-
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSD- 267 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~- 267 (466)
.|+ .+|||||+|+.+. .+.|+.|........++.+.+.||.... ...+....+.-+....|.
T Consensus 79 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~ 158 (238)
T 1ym0_A 79 VNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDA 158 (238)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCSSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHH
T ss_pred ECCCCCCCCCcccEEEEEeCCCccccCcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhH
Confidence 554 4699999999763 3566666553332378999999997542 223444444333322221
Q ss_pred -CCCCCccccEEEEc-------ccCCCCCccceeecC--CC--eEEEEEEeEecCC-CeeeEEEeHHHHHHHHHHHHHc
Q 012318 268 -LGLGGMRREYLQTD-------CAINAGNSGGPLVNI--DG--EIVGINIMKVAAA-DGLSFAVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 268 -~~~~~~~~~~i~~~-------~~i~~G~SGGPlvd~--~G--~VVGI~~~~~~~~-~g~~~aip~~~i~~~l~~l~~~ 333 (466)
+.........+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+..+....+|+++.+++
T Consensus 159 ~~~~~~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~~ 237 (238)
T 1ym0_A 159 VYTSDTIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCASGYPGVYSRVGFHAGWITDTITN 237 (238)
T ss_dssp HCTTSCCCTTEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSSSSSSSCEEEEEHHHHHHHHHHHHHC
T ss_pred hhcccccCCCeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCCCCCCCCcEEEEHHHhHHHHHHHhcC
Confidence 11001122344431 467999999999844 34 7999999975322 2246678899999999887654
No 63
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.47 E-value=2.6e-12 Score=120.94 Aligned_cols=177 Identities=16% Similarity=0.189 Sum_probs=113.1
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC----------CCcEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ----------DGRTFEGTVL 204 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~----------~g~~~~a~vv 204 (466)
.|-.|.|... +...|+|.+|+++ +|||+|||+.+ .+.|.+. +.+.+....+
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~g~~~~~~~~~~~~~~~~v~~~ 72 (223)
T 2bdg_A 12 QPWQAALVME--------NELFCSGVLVHPQ-WVLSAAHCFQN----------SYTIGLGLHSLEADQEPGSQMVEASLS 72 (223)
T ss_dssp STTEEEEECS--------SCEEEEEEEEETT-EEEECGGGCCS----------SEEEEESCSBSCGGGCTTCEEEEEEEE
T ss_pred CCcEEEEeeC--------CCEEEEEEEecCC-EEEEhHHhCCC----------CeEEEEeeeecCCCCCCCcEEEEEEEE
Confidence 4677887642 2367999999988 99999999964 2233332 1234555555
Q ss_pred EecC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC----CceEEeEEeeeecCccCCC
Q 012318 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ----NTVTAGIVSCVDRKSSDLG 269 (466)
Q Consensus 205 ~~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~~~~~~~~ 269 (466)
..|+ .+|||||+|+.+. .+.++.|.. ..+..|+.+++.||..... ..+....+.-+....|...
T Consensus 73 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~ 151 (223)
T 2bdg_A 73 VRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIAS-QCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKL 151 (223)
T ss_dssp EECTTTTSSTTCSCCEEEEESSCCCCCSSCCCCCBCS-SCCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHH
T ss_pred EeCCCCCCCCCcCcEEEEEECCcccCCCceecccCCC-CCCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhh
Confidence 5554 4699999999762 356677754 3467899999999986432 2333444433332222111
Q ss_pred CC-CccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHHHHH
Q 012318 270 LG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 270 ~~-~~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~l~~ 332 (466)
+. ......+... ...|.|+|||||+- +|.++||++++.... ..-+.+.-+....+|+++.++
T Consensus 152 ~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 222 (223)
T 2bdg_A 152 YDPLYHPSMFCAGGGQDQKDSCNGDSGGPLIC-NGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQ 222 (223)
T ss_dssp STTTCCTTEEEECCSTTCCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHHH
T ss_pred hCCCCCCCeEeccCCCCCCCcCCCCCCchheE-ccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHhc
Confidence 11 1122344442 35799999999994 689999999975311 234667888888888887653
No 64
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.47 E-value=1.9e-12 Score=122.11 Aligned_cols=179 Identities=16% Similarity=0.191 Sum_probs=113.6
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC----------CCcEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ----------DGRTFEGTVL 204 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~----------~g~~~~a~vv 204 (466)
.|-.|.|.... +...|+|.+|+++ +|||+|||+... +.|.+. ..+.+...-+
T Consensus 12 ~Pw~v~l~~~~-------~~~~CgGtLIs~~-~VLTAAHC~~~~----------~~v~~G~~~~~~~~~~~~~~~~v~~~ 73 (227)
T 2psx_A 12 QPWQAALLLRP-------NQLYCGAVLVHPQ-WLLTAAHCRKKV----------FRVRLGHYSLSPVYESGQQMFQGVKS 73 (227)
T ss_dssp CTTEEEEEETT-------TEEEEEEEEEETT-EEEECGGGCCSS----------CEEEESCCBSSCCCCTTCEEEEEEEE
T ss_pred CCCEEEEEecC-------CCceEEEEEEcCC-EEEEhHHcCCCC----------cEEEEeeeecccCCCCCcEEEEEEEE
Confidence 46778886431 2367999999988 999999998642 223322 1234555544
Q ss_pred EecC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC------CceEEeEEeeeecCccC
Q 012318 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ------NTVTAGIVSCVDRKSSD 267 (466)
Q Consensus 205 ~~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~------~~~t~G~Vs~~~~~~~~ 267 (466)
..|+ .+|||||+|+.+. .+.|+.|.. ..+..|+.++++||..... ..+....+.-+....|.
T Consensus 74 ~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~ 152 (227)
T 2psx_A 74 IPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSS-HCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCE 152 (227)
T ss_dssp EECTTCCSSSCTTCCEEEEESSCCCCCSSSCCCCBCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHH
T ss_pred EeCCCCCCCCCCCCEEEEEeCCCCCCCCceeeeECCC-CCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhh
Confidence 4444 4699999999752 356777754 4567899999999975421 23444444333322221
Q ss_pred CCCC-CccccEEEEc----ccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHHHHHc
Q 012318 268 LGLG-GMRREYLQTD----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 268 ~~~~-~~~~~~i~~~----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~l~~~ 333 (466)
..+. ......+... ...|.|+|||||+- +|.++||++++.... ..-+.+..+....+|+++.++.
T Consensus 153 ~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 225 (227)
T 2psx_A 153 DAYPRQIDDTMFCAGDKAGRDSCQGDSGGPVVC-NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQA 225 (227)
T ss_dssp HHSTTTCCTTEEEECCSTTCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHHHH
T ss_pred hhcCCCCCCCEEcccCCCCCccCCCCCCcceee-CCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHHhc
Confidence 1111 1112344432 35789999999994 689999999973211 2346678888889999887653
No 65
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.47 E-value=1.2e-12 Score=123.56 Aligned_cols=184 Identities=16% Similarity=0.203 Sum_probs=119.2
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC------CcEEEEEEEEec-
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------GRTFEGTVLNAD- 207 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~------g~~~~a~vv~~d- 207 (466)
.|.+|.|... +...|+|.+|+++ +|||+|||+.+.. ...+.|.+.. +..+..+.+..+
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~v~~i~~h~ 76 (235)
T 3h7t_A 12 EPWAVGVLVD--------EKPFCGGSILTAN-FVITAAQCVDGTK------PSDISIHYGSSYRTTKGTSVMAKKIYIVR 76 (235)
T ss_dssp STTEEEEEET--------TSCCEEEEESSSS-EEEECHHHHTTCC------GGGEEEEESCSBSSSSSEEEEEEEEEECS
T ss_pred CCcEEEEecC--------CCceEeEEEeeCC-EEEECHHHCCCCC------CCeeEEEcCccccccCCceeeeeeEEeee
Confidence 4778888653 2356999999998 9999999996421 2456666542 234444433332
Q ss_pred -----CCCCEEEEEeCCCC-----CCCccccCCCC-CCCCCCEEEEEecCCCC------CCceEEeEEeeeecCccCCCC
Q 012318 208 -----FHSDIAIVKINSKT-----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSDLGL 270 (466)
Q Consensus 208 -----~~~DlAlLkv~~~~-----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~~~~ 270 (466)
..+|||||+++.+. .+.++.|.... .+..|+.+++.||.... ...+....+.-+....|...+
T Consensus 77 y~~~~~~~DiAll~L~~~v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 156 (235)
T 3h7t_A 77 YHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQY 156 (235)
T ss_dssp CBTTTTBTCCEEEEESSCCCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHH
T ss_pred cCCCCCCCCeEEEEeccccccCCccccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHh
Confidence 35799999999763 45566665432 26789999999997532 233444444444332221100
Q ss_pred C------CccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecCC-CeeeEEEeHHHHHHHHHHHHHcC
Q 012318 271 G------GMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA-DGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 271 ~------~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~-~g~~~aip~~~i~~~l~~l~~~g 334 (466)
. ......+.. ....|.|+|||||+. +|+++||++++..-. ..-+.+..+....+|+++.++..
T Consensus 157 ~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~~~ 231 (235)
T 3h7t_A 157 KQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQ-NGTLVGVASYISSMPSEFPSVFLRVGYYVLDIKDIISGK 231 (235)
T ss_dssp HTTTCGGGCSTTEEEECBTTTTBBCCTTCTTCEEEE-TTEEEEEECCCTTCCTTSCEEEEEGGGGHHHHHHHHTTC
T ss_pred hhcccCccccCCeEecCCCCCCCccccCCCCCceee-CCeEEEEEEecCCCCCCCCceEEEHHHHHHHHHHHHhCC
Confidence 0 011234443 346789999999995 889999999875421 23466788889999999988665
No 66
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.47 E-value=1.9e-12 Score=121.93 Aligned_cols=177 Identities=15% Similarity=0.177 Sum_probs=113.1
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~---------~g~~~~a~vv~ 205 (466)
.|-.|.|... +...|+|.+|+++ +|||+|||+.. .+.|.+. .++.+...-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 72 (223)
T 1lo6_A 12 HPYQAALYTS--------GHLLCGGVLIHPL-WVLTAAHCKKP----------NLQVFLGKHNLRQRESSQEQSSVVRAV 72 (223)
T ss_dssp CTTEEEEEET--------TEEEEEEEEEETT-EEEECGGGCCT----------TCEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred CCCEEEEecC--------CCEEEEeEEecCC-EEEECccCCCC----------CeEEEEcceecCCCCCCcEEEEEEEEE
Confidence 4677888531 2367999999988 99999999863 1233332 12445555455
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC----CCceEEeEEeeeecCccCCCC
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDLGL 270 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~~~ 270 (466)
.|+ .+|||||+|+.+. .+.|+.|... ....|+.++++||.... ...+....+.-+....|...+
T Consensus 73 ~Hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 151 (223)
T 1lo6_A 73 IHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERD-CSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAY 151 (223)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCBCCC-TTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHS
T ss_pred ECCCCCCCCCcCeEEEEEECCcccCCCceeecccCCC-CCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhh
Confidence 554 4699999999763 3456777553 34789999999997643 223444444333332221111
Q ss_pred C-CccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecC---CCeeeEEEeHHHHHHHHHHHHH
Q 012318 271 G-GMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAA---ADGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 271 ~-~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~---~~g~~~aip~~~i~~~l~~l~~ 332 (466)
. ......+.. ....|.|+|||||+- +|+++||++++... ...-+.+.-+...++|+++.++
T Consensus 152 ~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 1lo6_A 152 PGQITQNMLCAGDEKYGKDSCQGDSGGPLVC-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQ 221 (223)
T ss_dssp TTTCCTTEEEEECTTTCCBCCTTTTTCEEEE-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred CCCCCCCeEEeecCCCCCeeccccCCCcEEe-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence 1 112234443 245799999999995 68999999997321 1234567888888999988764
No 67
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.47 E-value=1.8e-12 Score=121.71 Aligned_cols=179 Identities=17% Similarity=0.215 Sum_probs=113.8
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC-------CCcEEEEEEEEec
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ-------DGRTFEGTVLNAD 207 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~-------~g~~~~a~vv~~d 207 (466)
.|-.|.|.. +...|+|.+|+++ +|||+|||+... ..+.+... ..+.+..+-+..|
T Consensus 12 ~Pw~v~l~~---------~~~~C~GtLI~~~-~VLTAAhC~~~~--------~~v~~g~~~~~~~~~~~~~~~v~~~~~h 73 (223)
T 4i8h_A 12 VPYQVSLNS---------GYHFCGGSLINSQ-WVVSAAHCYKSG--------IQVRLGEDNINVVEGNEQFISASKSIVH 73 (223)
T ss_dssp STTEEEEES---------SSEEEEEEECSSS-EEEECGGGCCSS--------CEEEESCSSTTSCCSCCEEEEEEEEEEC
T ss_pred CCeEEEecC---------CCcEEEEEEEcCC-EEEecHHhCCCC--------cEEEEccccccccCCCcEEEEEeEEEEC
Confidence 466787762 2356999999988 999999999641 22222211 1234555555556
Q ss_pred C-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC------CceEEeEEeeeecCccCCCC
Q 012318 208 F-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ------NTVTAGIVSCVDRKSSDLGL 270 (466)
Q Consensus 208 ~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~------~~~t~G~Vs~~~~~~~~~~~ 270 (466)
+ .+|||||+|+.+. .+.++.|... ....|+.+++.||..... ..+....+..+....+...+
T Consensus 74 p~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 152 (223)
T 4i8h_A 74 PSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAY 152 (223)
T ss_dssp TTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHS
T ss_pred cCCCCCCCcCCEEEEEECCcCcCCCceeceECCCC-CCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhh
Confidence 5 4699999999753 3566777553 467899999999975422 22344444333322221111
Q ss_pred C-CccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHHc
Q 012318 271 G-GMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 271 ~-~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~~ 333 (466)
. ......+.. ....|.|+|||||+- +++++||++++..-. ..-+.+..+...++|+++.++.
T Consensus 153 ~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~~ 222 (223)
T 4i8h_A 153 PGQITSNMFCAGYLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIAS 222 (223)
T ss_dssp TTTCCTTEEEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred CCCCCCCeEeccCCCCCCccCCCCCCCcEEE-CCEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 1 111234443 245789999999994 689999999975422 2246678888899999887653
No 68
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.46 E-value=2.5e-12 Score=121.09 Aligned_cols=176 Identities=18% Similarity=0.242 Sum_probs=112.8
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~---------~g~~~~a~vv~ 205 (466)
.|..|.|. . +...|+|.+|+++ +|||+|||+.. .+.|.+. +++.+..+-+.
T Consensus 12 ~Pw~v~l~--~-------~~~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 71 (223)
T 3mfj_A 12 VPYQVSLN--S-------GYHFCGGSLINSQ-WVVSAAHCYKS----------GIQVRLGEDNINVVEGNEQFISASKSI 71 (223)
T ss_dssp STTEEEEE--S-------SSEEEEEEEEETT-EEEECGGGCCS----------SCEEEESCSSTTSCCSCCEEEEEEEEE
T ss_pred CCEEEEEE--c-------CCeEEEEEEecCC-EEEEhHHhcCC----------CcEEEECCceecccCCCcEEEEeeEEE
Confidence 46778883 1 2367999999988 99999999942 2233332 23445555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEeEEeeeecCccCC
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSDL 268 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~~ 268 (466)
.|+ .+|||||+|+.+. .+.++.|... ....|+.+++.||.... ...+....+.-+....|..
T Consensus 72 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~ 150 (223)
T 3mfj_A 72 VHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKS 150 (223)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHH
T ss_pred ECCCCCCCCCCCCEEEEEeCCCcccCCcEeeeECCCC-CCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhh
Confidence 554 4699999999763 3567777553 45789999999997542 1234444443333222211
Q ss_pred CCC-CccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHH
Q 012318 269 GLG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 269 ~~~-~~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~ 332 (466)
.+. ......+... ...|.|+|||||+- +|+++||++++..-. ..-+.+.-+...++|+++.++
T Consensus 151 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 3mfj_A 151 AYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp HSTTTCCTTEEEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred hhcCcCCCCEEEccCCCCCCCcCCCCcccceEE-CCEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 111 1122344442 35799999999995 789999999975321 234667888888999888654
No 69
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.46 E-value=3.7e-12 Score=119.34 Aligned_cols=173 Identities=21% Similarity=0.284 Sum_probs=110.9
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|..|.|... +...|+|.+|+++ +|||+|||+.+.. ...+.|.+.. .+.+..+.+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 76 (218)
T 2z7f_E 12 WPFMVSLQLR--------GGHFCGATLIAPN-FVMSAAHCVANVN------VRAVRVVLGAHNLSRREPTRQVFAVQRIF 76 (218)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECHHHHTTSC------GGGCEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred cCcEEEEEeC--------CCcEEEEEEccCC-EEEEcHHhcCCCC------cCcEEEEEeceecCCCCCceEEEEEEEEE
Confidence 4677888642 2367999999988 9999999997631 1345555432 1344444443
Q ss_pred ec------CCCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCccCCC
Q 012318 206 AD------FHSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSDLG 269 (466)
Q Consensus 206 ~d------~~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~~~ 269 (466)
.+ ..+|||||+|+.+. .+.|+.|.... .+..|+.++++||..... ..+....+..+ ...+..
T Consensus 77 ~h~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~- 154 (218)
T 2z7f_E 77 ENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCRR- 154 (218)
T ss_dssp ESCCBTTTTBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCCT-
T ss_pred ccCCCCCCCCCCEEEEEECCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcCc-
Confidence 33 34799999999763 35566665433 356799999999975432 23444444333 332221
Q ss_pred CCCccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHHHH
Q 012318 270 LGGMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 270 ~~~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~l~ 331 (466)
..+.. ....|.|+|||||+. +|.++||+++..... ..-+.+..+....+|+++.+
T Consensus 155 ------~~~Ca~~~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~~~ 217 (218)
T 2z7f_E 155 ------SNVCTLVRGRQAGVCFGDSGSPLVC-NGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSII 217 (218)
T ss_dssp ------TSEEEECTTSCCBCCTTCTTCEEEE-TTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred ------ceeeeccCCCCCeeCCCcCCCceEE-ccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 12222 346799999999994 789999999943211 12356788888888888754
No 70
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.45 E-value=1.9e-12 Score=122.78 Aligned_cols=178 Identities=17% Similarity=0.169 Sum_probs=112.6
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|... +...|+|.+|+++ +|||+|||+.. .+.|.+.. ++.+..+-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~~~ 72 (237)
T 1ao5_A 12 QPWQVAVYYQ--------KEHICGGVLLDRN-WVLTAAHCYVD----------QYEVWLGKNKLFQEEPSAQHRLVSKSF 72 (237)
T ss_dssp CTTEEEEEET--------TEEEEEEEEEETT-EEEECTTCCCS----------SCEEEESCCBSSSCCSSCEECCEEEEE
T ss_pred cCCEEEEeeC--------CCeEEEEEEeeCC-EEEECHHHCCC----------CCEEEecccccccCCCCcEEEEEEEEE
Confidence 4677888642 2367999999988 99999999953 22333321 2233344444
Q ss_pred ecC------------------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEeE
Q 012318 206 ADF------------------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGI 257 (466)
Q Consensus 206 ~d~------------------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~ 257 (466)
.|+ .+|||||+|+.+. .+.|+.|... ....|+.+++.||.... ...+....
T Consensus 73 ~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~ 151 (237)
T 1ao5_A 73 PHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTK-EPKPGSKCLASGWGSITPTRWQKPDDLQCVF 151 (237)
T ss_dssp ECTTSCGGGGGCSSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCCS-CCCTTCEEEEEESCCSSCC-CCCCSBCEEEE
T ss_pred cCCCcCcccccccccccccCCCCCEEEEEeCCccccCCceeCCCcCCC-CCCCCCEEEEEECCccCCCCCCCCCcccEEE
Confidence 433 6799999999763 3557777553 46789999999997532 22344444
Q ss_pred EeeeecCccCCCCC-CccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHH
Q 012318 258 VSCVDRKSSDLGLG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIE 328 (466)
Q Consensus 258 Vs~~~~~~~~~~~~-~~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~ 328 (466)
+..+....|...+. ......+... ...|.|+|||||+- +|.++||++++.... ..-+.+..+....+|++
T Consensus 152 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~ 230 (237)
T 1ao5_A 152 ITLLPNENCAKVYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIK 230 (237)
T ss_dssp EEEECHHHHHHHCSSCCCTTEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHH
T ss_pred EEecChhHhhhhhcccCCCCEEEEccCCCCCCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHH
Confidence 44333322211111 1112344432 35799999999995 789999999973221 22466788888999998
Q ss_pred HHHHc
Q 012318 329 QFKKN 333 (466)
Q Consensus 329 ~l~~~ 333 (466)
+.++.
T Consensus 231 ~~~~~ 235 (237)
T 1ao5_A 231 DTMMK 235 (237)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 87653
No 71
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.45 E-value=3e-12 Score=121.28 Aligned_cols=176 Identities=16% Similarity=0.173 Sum_probs=113.9
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|.. + ..|+|.+|+++ +|||+|||+.. .+.|.+.. ++.+..+-+.
T Consensus 12 ~Pw~v~l~~---------~-~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 70 (235)
T 1ton_A 12 QPWQVAVIN---------E-YLCGGVLIDPS-WVITAAHCYSN----------NYQVLLGRNNLFKDEPFAQRRLVRQSF 70 (235)
T ss_dssp CTTEEEEES---------S-SEEEEEEEETT-EEEECGGGCCS----------CCEEEESCSBTTSCCTTCEEECEEEEE
T ss_pred cCcEEEEcc---------C-CeEEEEEecCC-EEEEcHHhCCC----------CcEEEeCcccccCCCCcceEEEEEEEE
Confidence 466777753 1 56999999988 99999999952 22333221 2333344344
Q ss_pred ecC------------------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEeE
Q 012318 206 ADF------------------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGI 257 (466)
Q Consensus 206 ~d~------------------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~ 257 (466)
.|+ .+|||||+|+.+. .+.++.|... .+..|+.+++.||.... ...+....
T Consensus 71 ~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~ 149 (235)
T 1ton_A 71 RHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTK-EPKVGSTCLASGWGSTNPSEMVVSHDLQCVN 149 (235)
T ss_dssp ECTTCCCC--------CCCCSTTCCEEEEESSCCCCCSSCCCCCCCCS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEE
T ss_pred eCCCCcccccccccccccCCCcCCEEEEEcCCccccCCcceeeeCCCC-CCCCCCEEEEEecCCCCCCCCccCccceEEE
Confidence 333 3599999999763 3567777653 46789999999997542 22344555
Q ss_pred EeeeecCccCCCCCC-ccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHH
Q 012318 258 VSCVDRKSSDLGLGG-MRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIE 328 (466)
Q Consensus 258 Vs~~~~~~~~~~~~~-~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~ 328 (466)
+.-+....|...+.. .....+... ...|.|+|||||+- +|.++||++++.... ..-+.+.-+...++|++
T Consensus 150 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~ 228 (235)
T 1ton_A 150 IHLLSNEKCIETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIK 228 (235)
T ss_dssp EEEECGGGCGGGGSTTGGGGEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHH
T ss_pred EEEeCHHHHHHHhcCcCCCCeEeeccCCCCCcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHH
Confidence 554444444321211 122344432 35799999999995 789999999874321 23466788888999998
Q ss_pred HHHHc
Q 012318 329 QFKKN 333 (466)
Q Consensus 329 ~l~~~ 333 (466)
+.++.
T Consensus 229 ~~~~~ 233 (235)
T 1ton_A 229 KVMKE 233 (235)
T ss_dssp HHHHH
T ss_pred HHHcc
Confidence 87654
No 72
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.44 E-value=4.2e-12 Score=120.44 Aligned_cols=178 Identities=19% Similarity=0.165 Sum_probs=112.0
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|... +...|+|.+|+++ +|||+|||+.+ .+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~~~ 72 (238)
T 1spj_A 12 QPWQAALYHF--------STFQCGGILVHRQ-WVLTAAHCISD----------NYQLWLGRHNLFDDENTAQFVHVSESF 72 (238)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECGGGCCS----------SEEEEESCSBTTSCCTTCEEECEEEEE
T ss_pred CCcEEEEEeC--------CCeeEEEEEecCC-EEEEcHHhCCC----------CceEEEEeccccCCCCCceEEEEEEEE
Confidence 4677888642 2367999999988 99999999964 23333321 2334444444
Q ss_pred ecC------------------CCCEEEEEeCCCCC-----CCccccCCCCCCCCCCEEEEEecCCCC------CCceEEe
Q 012318 206 ADF------------------HSDIAIVKINSKTP-----LPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAG 256 (466)
Q Consensus 206 ~d~------------------~~DlAlLkv~~~~~-----~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G 256 (466)
.|+ .+|||||+|+.+.. +.++.|.. .....|+.++++||.... ...+...
T Consensus 73 ~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~~v~pi~L~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~ 151 (238)
T 1spj_A 73 PHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPT-EEPEVGSTCLASGWGSIEPENFSFPDDLQCV 151 (238)
T ss_dssp ECTTSCGGGGCC--CTTTCCCTTCCEEEEESSCCCCSSTTCCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEE
T ss_pred cCCCccccccccccccccccCCCCeEEEEECccccccCCceeeccCCC-CCCCCCCEEEEEecCCCCCCCCCCcCcccEE
Confidence 433 35999999987532 45666654 345679999999997532 2234444
Q ss_pred EEeeeecCccCCCCC-CccccEEEE-----cccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHH
Q 012318 257 IVSCVDRKSSDLGLG-GMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKII 327 (466)
Q Consensus 257 ~Vs~~~~~~~~~~~~-~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l 327 (466)
.+.-+....|...+. ......+.. ....|.|+|||||+- +|.++||++++.... ..-+.+.-+....+|+
T Consensus 152 ~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI 230 (238)
T 1spj_A 152 DLKILPNDECKKAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMC-DGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWI 230 (238)
T ss_dssp EEEEECHHHHHHHCSSCCCTTEEEEECTTCSSBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHH
T ss_pred EEeecCHHHhhhhccCCCCCCeEEeeCCCCCCCCCCCCCCCcEEE-cCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHH
Confidence 444333332211111 111234443 246799999999994 689999999974221 2345677888889999
Q ss_pred HHHHHc
Q 012318 328 EQFKKN 333 (466)
Q Consensus 328 ~~l~~~ 333 (466)
++.++.
T Consensus 231 ~~~i~~ 236 (238)
T 1spj_A 231 EDTIAE 236 (238)
T ss_dssp HHHHHH
T ss_pred HHHhhc
Confidence 887653
No 73
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.44 E-value=9.6e-12 Score=118.37 Aligned_cols=185 Identities=20% Similarity=0.219 Sum_probs=116.1
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|...... .....|+|.+|+++ +|||+|||+... ..+.|.+.. ++.+..+-+.
T Consensus 12 ~Pw~v~l~~~~~~----~~~~~CgGtLI~~~-~VLTAAHC~~~~--------~~~~V~~G~~~~~~~~~~~~~~~v~~i~ 78 (241)
T 1bru_P 12 WPWQVSLQYDSSG----QWRHTCGGTLVDQS-WVLTAAHCISSS--------RTYRVVLGRHSLSTNEPGSLAVKVSKLV 78 (241)
T ss_dssp STTEEEEEEEETT----EEEEEEEEEEEETT-EEEECGGGCCTT--------SCEEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred cCcEEEEEEecCC----ceeeEEEeEEeeCC-EEEEcHHhcccC--------CceEEEEEcccccCCCCccEEEEEEEEE
Confidence 4677888653211 11267999999998 999999999731 345555532 2445555555
Q ss_pred ecCC---------CCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCcc
Q 012318 206 ADFH---------SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSS 266 (466)
Q Consensus 206 ~d~~---------~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~ 266 (466)
.|+. +|||||+|+.+. .+.++.|.... .+..|+.+++.||.... ...+....+.-+....|
T Consensus 79 ~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C 158 (241)
T 1bru_P 79 VHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATC 158 (241)
T ss_dssp ECTTCCTTCGGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHH
T ss_pred ECCCCCCCCCCCCCcEEEEEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHh
Confidence 5542 799999999763 35566665433 35678999999997532 22344444444443333
Q ss_pred CCC--CCC-ccccEEEEc----ccCCCCCccceeecC--CC--eEEEEEEeEec-CC---CeeeEEEeHHHHHHHHHHHH
Q 012318 267 DLG--LGG-MRREYLQTD----CAINAGNSGGPLVNI--DG--EIVGINIMKVA-AA---DGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 267 ~~~--~~~-~~~~~i~~~----~~i~~G~SGGPlvd~--~G--~VVGI~~~~~~-~~---~g~~~aip~~~i~~~l~~l~ 331 (466)
... ++. .....+... ...|.|+|||||+-. +| .++||++++.. .. ..-+.+.-+....+|+++.+
T Consensus 159 ~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i 238 (241)
T 1bru_P 159 SKPGWWGSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVI 238 (241)
T ss_dssp TSTTTTGGGCCTTEEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHH
T ss_pred CcccccCCcCCCceEeecCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHHH
Confidence 211 111 112344442 357999999999943 46 89999999752 11 22456677888888888765
Q ss_pred H
Q 012318 332 K 332 (466)
Q Consensus 332 ~ 332 (466)
+
T Consensus 239 ~ 239 (241)
T 1bru_P 239 A 239 (241)
T ss_dssp H
T ss_pred h
Confidence 4
No 74
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.44 E-value=5.6e-12 Score=120.02 Aligned_cols=184 Identities=17% Similarity=0.232 Sum_probs=116.6
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC------CcEEEEEEEEec-
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------GRTFEGTVLNAD- 207 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~------g~~~~a~vv~~d- 207 (466)
.|.+|.|... +...|+|.+|+++ +|||+|||+.+.. ..+.|.+.. +..+..+-+..+
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~~-------~~~~v~~G~~~~~~~~~~~~v~~i~~Hp 75 (240)
T 2zgc_A 12 RPYMASLQRN--------GSHLCGGVLVHPK-WVLTAAHCLAQRM-------AQLRLVLGLHTLDSPGLTFHIKAAIQHP 75 (240)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECGGGGCSCG-------GGEEEEESCSBSSSCCEEEEEEEEEECT
T ss_pred cCcEEEEEeC--------CCeEEEEEEEcCC-EEEEcHHhcCCCC-------CCEEEEecccccCCCCeEEEEEEEEECC
Confidence 4778888641 2367999999988 9999999997631 245665532 234555544443
Q ss_pred -------CCCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccCC--
Q 012318 208 -------FHSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSDL-- 268 (466)
Q Consensus 208 -------~~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~~-- 268 (466)
..+|||||+|+.+. .+.++.|.... .+..|+.+++.||.... ...+....+.-+....|..
T Consensus 76 ~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 155 (240)
T 2zgc_A 76 RYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSR 155 (240)
T ss_dssp TCBCTTSCBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTT
T ss_pred CCCCCCCCcccEEEEEeCCcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCcc
Confidence 24699999999753 35666665433 35679999999997542 1234444444333333321
Q ss_pred CCC-CccccEEEE-----cccCCCCCccceeecCC-CeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHHHHHcC
Q 012318 269 GLG-GMRREYLQT-----DCAINAGNSGGPLVNID-GEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 269 ~~~-~~~~~~i~~-----~~~i~~G~SGGPlvd~~-G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~l~~~g 334 (466)
.+. ......+.. ....|.|+|||||+-.+ ..++||++++.... ..-+.+.-+....+|+++..+..
T Consensus 156 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~~~ 231 (240)
T 2zgc_A 156 FWNGSLSPSMVCLAADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGRS 231 (240)
T ss_dssp TTTTCCCTTEEEEECSSTTCBCCTTCTTCEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHCCC
T ss_pred ccCCCCCCceEeeccCCCCCccCCCCccCeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHhhc
Confidence 111 112234443 23579999999999432 39999999873221 22456678888999999877655
No 75
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.43 E-value=7.9e-12 Score=119.06 Aligned_cols=189 Identities=19% Similarity=0.242 Sum_probs=117.9
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCC--------CCCCCceEEEEeCC---------Cc
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGS--------RALPKGKVDVTLQD---------GR 197 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~--------~~~~~~~i~V~~~~---------g~ 197 (466)
.|.+|.|.... +...|+|.+|+++ +|||+|||+...... .......+.|.+.. ++
T Consensus 12 ~Pw~v~l~~~~-------~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~ 83 (251)
T 3gov_B 12 TPWIAMLSHLN-------GQPFCGGSLLGSS-WIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQ 83 (251)
T ss_dssp CTTEEEEEETT-------CCEEEEEEEETTT-EEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSCE
T ss_pred cCeEEEEeccC-------CCeeEEEEEecCC-EEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcce
Confidence 56788886422 2357999999988 999999999753111 00122456666532 23
Q ss_pred EEEEEEEEecCC-------CCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC----CCceEEeEEeeee
Q 012318 198 TFEGTVLNADFH-------SDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL----QNTVTAGIVSCVD 262 (466)
Q Consensus 198 ~~~a~vv~~d~~-------~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~ 262 (466)
.+..+-+..|+. +|||||+|..+. .+.|+.|... ....|+.+++.||.... ...+....+.-+.
T Consensus 84 ~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~ 162 (251)
T 3gov_B 84 HLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEG-PQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVD 162 (251)
T ss_dssp EECEEEEEECTTCBTTTTBTCCEEEEESSCCCCSSSCCCCBCCSS-CCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEEC
T ss_pred EeeeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCceEEeECCCC-CCCCCCEEEEEcCCCCCCCCCCccceEEeeEEEC
Confidence 455555566654 699999998752 3456777543 44789999999997542 2234444444333
Q ss_pred cCccCCCCC----CccccEEEEc-----ccCCCCCccceeecC---CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHH
Q 012318 263 RKSSDLGLG----GMRREYLQTD-----CAINAGNSGGPLVNI---DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKI 326 (466)
Q Consensus 263 ~~~~~~~~~----~~~~~~i~~~-----~~i~~G~SGGPlvd~---~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~ 326 (466)
...|...+. ......+... ...|.|+|||||+-. +| .++||++++..-. ...+.+..+...++|
T Consensus 163 ~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~W 242 (251)
T 3gov_B 163 HSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDW 242 (251)
T ss_dssp HHHHHHHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHHH
T ss_pred HHHhhhhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHH
Confidence 322211110 1122345442 467999999999943 34 6999999985422 224667888888999
Q ss_pred HHHHHH
Q 012318 327 IEQFKK 332 (466)
Q Consensus 327 l~~l~~ 332 (466)
+++..+
T Consensus 243 I~~~~~ 248 (251)
T 3gov_B 243 IQRVTG 248 (251)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 988653
No 76
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.43 E-value=3.5e-12 Score=120.11 Aligned_cols=177 Identities=19% Similarity=0.209 Sum_probs=111.4
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-------CcEEEEEEEEec
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GRTFEGTVLNAD 207 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-------g~~~~a~vv~~d 207 (466)
.|-.|.|.. . ....|+|.+|+++ +|||+|||+.. .+.|.+.. ++.+..+-+..|
T Consensus 12 ~Pw~v~l~~-~-------~~~~CgGtLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~v~~~~~H 72 (224)
T 2qxi_A 12 HPWQVALLS-G-------NQLHCGGVLVNER-WVLTAAHCKMN----------EYTVHLGSDTLGDRRAQRIKASKSFRH 72 (224)
T ss_dssp CTTEEEEEE-T-------TEEEEEEEEEETT-EEEECGGGCCS----------CEEEEESCSBTTCTTSEEEEECEEEEC
T ss_pred CCCEEEEee-C-------CCeEEEEEEecCC-EEEEhHHcCCC----------CcEEEEeeeecCCCccEEEEEEEEEEC
Confidence 467788841 1 1137999999988 99999999842 34454432 244555555555
Q ss_pred C-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEeEEeeeecCccCCCC
Q 012318 208 F-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSDLGL 270 (466)
Q Consensus 208 ~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~~~~ 270 (466)
+ .+|||||+|+.+. .+.++.|... ....|+.++++||.... ...+....+.-+....|...+
T Consensus 73 p~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 151 (224)
T 2qxi_A 73 PGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSR-CEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVY 151 (224)
T ss_dssp TTCCTTTCTTCCEEEECSSCCCCBTTBCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHH
T ss_pred CCCCCCCCcCcEEEEEeCCCCcCCCceeeEECCCC-CCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHh
Confidence 4 4699999999763 3566677543 34689999999997642 123333333333322221000
Q ss_pred C-CccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHHHHH
Q 012318 271 G-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 271 ~-~~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~l~~ 332 (466)
. ......+... ...|.|+|||||+- +|+++||++++.... ..-+.+.-+....+|+++.++
T Consensus 152 ~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 221 (224)
T 2qxi_A 152 KDLLENSMLCAGIPDSKKNACNGDSGGPLVC-RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMK 221 (224)
T ss_dssp GGGCCTTEEEEECTTCCCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred cCcCCCCeEEecCCCCCCccCCCCccccEEE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 0 0112234432 35799999999995 789999999873211 224567888888899888665
No 77
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.42 E-value=8.3e-12 Score=117.18 Aligned_cols=170 Identities=19% Similarity=0.175 Sum_probs=108.5
Q ss_pred eeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-------CcEEEEEEEEecCC-------CCEEEEEeCCCC
Q 012318 156 IGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GRTFEGTVLNADFH-------SDIAIVKINSKT 221 (466)
Q Consensus 156 ~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-------g~~~~a~vv~~d~~-------~DlAlLkv~~~~ 221 (466)
.|+|.+|+++ +|||+|||+.+... ...+.|.+.. ...+....+..|+. +|||||+|+.+.
T Consensus 21 ~CgGtLI~~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v 94 (224)
T 3beu_A 21 GCGGALYAQD-IVLTAAHCVSGSGN-----NTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPI 94 (224)
T ss_dssp TEEEEEEETT-EEEECGGGSCSSEE-----BCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCEEEEESSCC
T ss_pred ceeEEEeeCC-EEEEChhhcCCCCC-----cceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEEEEEeCCCC
Confidence 4999999988 99999999975310 1234454421 23455555555553 599999999877
Q ss_pred CCCccccCCCCCCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCccC--CCCCCccccEEEEc-----ccCCCCCc
Q 012318 222 PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSD--LGLGGMRREYLQTD-----CAINAGNS 289 (466)
Q Consensus 222 ~~~~~~l~~s~~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~--~~~~~~~~~~i~~~-----~~i~~G~S 289 (466)
.++++.+.... ...+..+.++||..... ..+....+.-+....|. +.........+... ...|.|+|
T Consensus 95 ~~~~i~l~~~~-~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDs 173 (224)
T 3beu_A 95 NQPTLKIATTT-AYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAGYDTKQEDTCQGDS 173 (224)
T ss_dssp CSCCCEECCSS-TTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGEEEECCSSSSCBCCTTCT
T ss_pred CCCcccccccc-ccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCeEEeccCCCCCcCCCCcC
Confidence 67777776543 33466999999975422 23444444433332221 11111223344432 35799999
Q ss_pred cceeecCC--C--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHH
Q 012318 290 GGPLVNID--G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 290 GGPlvd~~--G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~ 332 (466)
||||+-.+ | .++||++++..-. ..-+.+.-+....+|+++..+
T Consensus 174 GgPl~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 222 (224)
T 3beu_A 174 GGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASAAR 222 (224)
T ss_dssp TCEEEEECTTSCEEEEEEEEEESSSSCTTCCEEEEEHHHHHHHHHHHHT
T ss_pred CCeeEEecCCCCEEEEEEeccCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 99999433 3 7899999985422 234677889999999987654
No 78
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.42 E-value=5.6e-12 Score=119.47 Aligned_cols=188 Identities=16% Similarity=0.208 Sum_probs=115.5
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-----------CcEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-----------GRTFEGTV 203 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-----------g~~~~a~v 203 (466)
.|..|.|.... +...|+|.+|+++ +|||+|||+.+.... ...+.|.+.. .+.+...-
T Consensus 9 ~Pw~v~l~~~~-------~~~~CgGtLI~~~-~VLTAAHC~~~~~~~----~~~~~v~~G~~~~~~~~~~~~~~~~~v~~ 76 (234)
T 2asu_B 9 SPWTVSLRNRQ-------GQHFCGGSLVKEQ-WILTARQCFSSCHMP----LTGYEVWLGTLFQNPQHGEPSLQRVPVAK 76 (234)
T ss_dssp CTTEEEEECTT-------SCEEEEEEEEETT-EEEEEGGGSSCTTCC----CTTCEEEESCSBSSCCTTCTTCEEEEEEE
T ss_pred CcceEEeeccC-------CCEEEEEEEEeCC-EEEECHHHcCCCCCC----cccEEEEEeeeeccCCCCCCceEEEEEEE
Confidence 57788886421 2467999999988 999999999653110 1234444321 23455554
Q ss_pred EEecC-CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC----CCceEEeEEeeeecCccCCCCC-C
Q 012318 204 LNADF-HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDLGLG-G 272 (466)
Q Consensus 204 v~~d~-~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~~~~-~ 272 (466)
+..++ .+|||||+|+.+. .+.++.|.... .+..|+.++++||.... ...+....+.-+....|...+. .
T Consensus 77 i~~hp~~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 156 (234)
T 2asu_B 77 MVCGPSGSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGR 156 (234)
T ss_dssp EEECSTTCCEEEEEESSCCCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTC
T ss_pred EecCCCCCCeEEEEeCCcCcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCc
Confidence 55554 5899999999763 35566665432 35679999999997543 2334444444443332221111 1
Q ss_pred ccccEEEE-----cccCCCCCccceeecCC-C--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHHcC
Q 012318 273 MRREYLQT-----DCAINAGNSGGPLVNID-G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 273 ~~~~~i~~-----~~~i~~G~SGGPlvd~~-G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~~g 334 (466)
.....+.. ....|.|+|||||+-.. | .++||++++..-. ..-+.+.-+....+|+++..+..
T Consensus 157 ~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~~ 228 (234)
T 2asu_B 157 VRESEMCTEGLLAPVGACEGDYGGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVMRLG 228 (234)
T ss_dssp CCTTEEEECCCSSCCBCCTTCTTCEEEEEETTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHHHHHHHC---
T ss_pred cCcceEeecCCCCCCeeccCCCCCceEEEECCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHhhcc
Confidence 11234443 23579999999999433 2 8999999875321 23466788888888888866544
No 79
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.42 E-value=1.8e-12 Score=121.87 Aligned_cols=187 Identities=18% Similarity=0.202 Sum_probs=115.4
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCC--------cEEEEEEEE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG--------RTFEGTVLN 205 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g--------~~~~a~vv~ 205 (466)
-.|.+|.|...... ....|+|.+|+++ +|||+|||+.+.. ...+.|.+... ..+..+.+.
T Consensus 10 ~~Pw~v~l~~~~~~-----~~~~CgGtLI~~~-~VLTAAHC~~~~~------~~~~~v~~g~~~~~~~~~~~~~~v~~i~ 77 (228)
T 3h7o_A 10 QVPWTVAVRTYPGE-----ESLTCGGAILSQW-FVLTAAHCVFDQK------PETIVIQYESTNLWEDPGKSDPYVSHVY 77 (228)
T ss_dssp GSTTEEEEEECGGG-----CCEEEEEEESSSS-EEEECHHHHTTSC------GGGCEEEESCSBTTTBCCEEECCEEEEE
T ss_pred CCCeEEEEeecCCC-----CceEeeeEEeeCC-EEEEcHHhcccCC------CCcEEEEecccccccCCCceeeeEEEEE
Confidence 35778888754211 1237999999988 9999999996421 13444544321 122223233
Q ss_pred ec------CCCCEEEEEeCCCC-----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCccCC
Q 012318 206 AD------FHSDIAIVKINSKT-----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSDL 268 (466)
Q Consensus 206 ~d------~~~DlAlLkv~~~~-----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~~ 268 (466)
.+ ..+|||||+|+.+. .+.++.|.... .+..|+.+++.||..... ..+....+.-+....|..
T Consensus 78 ~h~y~~~~~~~DIALl~L~~~v~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 157 (228)
T 3h7o_A 78 LSFYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRT 157 (228)
T ss_dssp ESSCBTTTTBTCCEEEEESSCCCCCSSSSCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHH
T ss_pred ccccCCCCccCCEEEEEECCcccccccccccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHH
Confidence 22 25799999999763 44667775533 267899999999976432 224444444443332221
Q ss_pred CCC--CccccEEEEc---ccCCCCCccceeecCCCeEEEEEEeEecCC-CeeeEEEeHHHHHHHHHHHHHc
Q 012318 269 GLG--GMRREYLQTD---CAINAGNSGGPLVNIDGEIVGINIMKVAAA-DGLSFAVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 269 ~~~--~~~~~~i~~~---~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~-~g~~~aip~~~i~~~l~~l~~~ 333 (466)
.+. ......+... ...|.|+|||||+. +++++||++++.... ..-+.+.-+....+|+++.+++
T Consensus 158 ~~~~~~~~~~~~Ca~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~~p~vyt~v~~~~~WI~~~i~~ 227 (228)
T 3h7o_A 158 KYGPIFLSLQVFCAQKVGVSLESGDAGDPTVQ-QDTLVGVAAYFPKRPEGAPEVFTKVGSYVSWIQDIIKK 227 (228)
T ss_dssp HHTTSCCCSSEEEEECTTCCCCGGGTTCEEEE-TTEEEEEECCCTTCCTTCCEEEEEGGGTHHHHHHHHTT
T ss_pred HhcCccCCceEEecCCCCCcCCCCCCCCccee-cCeEEEEEeecCcCCCCCCcEEEEHHHHHHHHHHHhhc
Confidence 110 1112233332 46789999999995 789999999875422 2345678888899999887654
No 80
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.42 E-value=4.5e-12 Score=120.45 Aligned_cols=183 Identities=18% Similarity=0.232 Sum_probs=113.4
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC--------CCcEEEEEEEEe
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ--------DGRTFEGTVLNA 206 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~--------~g~~~~a~vv~~ 206 (466)
.|..|.|..... .....|+|.+|+++ +|||+|||+.+.. ...+.|.+. +++.+..+-+..
T Consensus 12 ~Pw~v~l~~~~~-----~~~~~CgGtLIs~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~~~v~~i~~ 79 (241)
T 1m9u_A 12 FPWQLSQQRQSG-----SWSHSCGASLLSST-SALSASHCVDGVL------PNNIRVIAGLWQQSDTSGTQTANVDSYTM 79 (241)
T ss_dssp STTEEEEEEESS-----SEEEEEEEEECSSS-EEEECHHHHTTCC------GGGEEEEESCSBTTCCTTCEEEEEEEEEE
T ss_pred cCeEEEEEecCC-----ceeeeeEEEEEeCC-EEEecHHhCCCCC------cceEEEEEEeecCCCCCCceEEEEEEEEe
Confidence 466788865321 11367999999988 9999999997631 135666553 234566666666
Q ss_pred cCCC---------CEEEEEeCCCC----CCCccccCCC-CCCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccC
Q 012318 207 DFHS---------DIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD 267 (466)
Q Consensus 207 d~~~---------DlAlLkv~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~ 267 (466)
|+.+ |||||+|+.+. .+.++.|... .....|+.+++.||.... ...+....+.-+....|.
T Consensus 80 hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~ 159 (241)
T 1m9u_A 80 HENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCT 159 (241)
T ss_dssp CTTTTCSSSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHH
T ss_pred CCCcCCCCCcccccEEEEEecCccccCCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhh
Confidence 5544 99999999763 3566667554 223379999999997542 223444444333322221
Q ss_pred C---CCCC--ccccEEEEc-----ccCCCCCccceeecCCC--eEEEEEEe--Eec-C---CCeeeEEEeHHHHHHHHHH
Q 012318 268 L---GLGG--MRREYLQTD-----CAINAGNSGGPLVNIDG--EIVGINIM--KVA-A---ADGLSFAVPIDSAAKIIEQ 329 (466)
Q Consensus 268 ~---~~~~--~~~~~i~~~-----~~i~~G~SGGPlvd~~G--~VVGI~~~--~~~-~---~~g~~~aip~~~i~~~l~~ 329 (466)
. +... .....+... ...|.|+|||||+-.+| .++||+++ +.. . ...-+.+.-+....+|+++
T Consensus 160 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~ 239 (241)
T 1m9u_A 160 AAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCPDGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239 (241)
T ss_dssp HHHTTSTTCCCCTTEEEECCTTSCCBCCTTCTTCEEEEESSSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHH
T ss_pred hhhcccCCCcccCCcEEECcCCCCCeeecCcCCccEEEeCCCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhh
Confidence 1 1011 223344442 35799999999995435 89999998 321 1 1224566777788888775
No 81
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.42 E-value=7.2e-12 Score=118.27 Aligned_cols=184 Identities=19% Similarity=0.183 Sum_probs=114.7
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCC------cEEEEEEEEecC
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG------RTFEGTVLNADF 208 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g------~~~~a~vv~~d~ 208 (466)
.|..|.|...... .....|+|.+|+++ +|||+|||+.+. ..+.|.+... ..+..+-+..|+
T Consensus 12 ~Pw~v~l~~~~~~----~~~~~CgGtLIs~~-~VLTAAHC~~~~--------~~~~v~~G~~~~~~~~~~~~v~~i~~hp 78 (230)
T 2hlc_A 12 FPYQAGLDITLQD----QRRVWCGGSLIDNK-WILTAAHCVHDA--------VSVVVYLGSAVQYEGEAVVNSERIISHS 78 (230)
T ss_dssp STTEEEEEEEETT----SCEEEEEEEEEETT-EEEECHHHHTTE--------EEEEEEESCSBTTCCSEEEECSEEEECT
T ss_pred CCcEEEEEEEecC----CCCEEEEEEEeeCC-EEEECHHHCCCC--------cceEEEEeeeecCCCCeEEEEEEEEECC
Confidence 4678888653221 23367999999998 999999999752 3556665431 334444444443
Q ss_pred -------CCCEEEEEeCCC----CCCCccccCCCC---CCCCCCEEEEEecCCCCC--CceEEeEEeeeecCccCCCCC-
Q 012318 209 -------HSDIAIVKINSK----TPLPAAKLGTSS---KLCPGDWVVAMGCPHSLQ--NTVTAGIVSCVDRKSSDLGLG- 271 (466)
Q Consensus 209 -------~~DlAlLkv~~~----~~~~~~~l~~s~---~~~~G~~V~~iG~p~~~~--~~~t~G~Vs~~~~~~~~~~~~- 271 (466)
.+|||||+|+ + ..+.|+.|.... ....|+.+.+.||..... ..+....+..+....|...+.
T Consensus 79 ~y~~~~~~~DiALl~L~-~~~~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~ 157 (230)
T 2hlc_A 79 MFNPDTYLNDVALIKIP-HVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPP 157 (230)
T ss_dssp TCBTTTTBTCCEEEECS-CCCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCT
T ss_pred CCCCCCccccEEEEEec-CCCcCCcEeeeEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCC
Confidence 4699999998 4 245667775533 245789999999986432 234444443333322221111
Q ss_pred -CccccEEEEc----ccCCCCCccceeecC-CCeEEEEEEeEec-C--CCeeeEEEeHHHHHHHHHHHHH
Q 012318 272 -GMRREYLQTD----CAINAGNSGGPLVNI-DGEIVGINIMKVA-A--ADGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 272 -~~~~~~i~~~----~~i~~G~SGGPlvd~-~G~VVGI~~~~~~-~--~~g~~~aip~~~i~~~l~~l~~ 332 (466)
......+... ...|.|+|||||+-. ++.++||++++.. . ....+.+..+....+|+++..+
T Consensus 158 ~~~~~~~~Ca~~~~~~~~C~GDSGgPl~~~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~~ 227 (230)
T 2hlc_A 158 GIIVESTICGDTSDGKSPCFGDSGGPFVLSDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQNTG 227 (230)
T ss_dssp TSSCTTEEEECCTTSCBCCTTCTTCEEEEGGGTEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHHHHC
T ss_pred CcccCCeEEecCCCCCCcCCCCCCCeeEECcCCEEEEEEEEeCCCCCCCCCCCEEEEhHHhHHHHHHhhC
Confidence 1122344432 357999999999943 3599999999752 1 1223456778888888887653
No 82
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.41 E-value=1.3e-11 Score=117.35 Aligned_cols=185 Identities=15% Similarity=0.175 Sum_probs=114.3
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|..|.|...... .....|+|.+|+++ +|||+|||+... ..+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~~~~----~~~~~CgGsLI~~~-~VLTAAHC~~~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 78 (240)
T 1gvk_B 12 WPSQISLQYRSGS----SWAHTCGGTLIRQN-WVMTAAHCVDRE--------LTFRVVVGEHNLNQNNGTEQYVGVQKIV 78 (240)
T ss_dssp CTTEEEEEEEETT----EEEEEEEEEEEETT-EEEECGGGGCSC--------CCEEEEESCSBTTSCCSCCEEEEEEEEE
T ss_pred cCEEEEEEecCCC----ccCceEEEEEeeCC-EEEECHHHCCCC--------cceEEEECCeecccCCCcceEEEEEEEE
Confidence 4677888632110 01367999999988 999999999763 345555532 2345555555
Q ss_pred ecC---------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCcc
Q 012318 206 ADF---------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSS 266 (466)
Q Consensus 206 ~d~---------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~ 266 (466)
.|+ .+|||||+|+.+. .+.++.|.... .+..|+.+++.||..... ..+....+..+....|
T Consensus 79 ~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C 158 (240)
T 1gvk_B 79 VHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAIC 158 (240)
T ss_dssp ECTTCCTTCGGGCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHH
T ss_pred ECCCCCCCCCCCCCcEEEEEECCccccCCCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHh
Confidence 554 5699999999763 34556665432 356789999999975421 2333333333332222
Q ss_pred CCC--CCC-ccccEEEEc----ccCCCCCccceeecC-CC--eEEEEEEeEec-C---CCeeeEEEeHHHHHHHHHHHHH
Q 012318 267 DLG--LGG-MRREYLQTD----CAINAGNSGGPLVNI-DG--EIVGINIMKVA-A---ADGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 267 ~~~--~~~-~~~~~i~~~----~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~-~---~~g~~~aip~~~i~~~l~~l~~ 332 (466)
... ++. .....+... ...|.|+|||||+-. +| .++||++++.. . ...-+.+.-+....+|+++.++
T Consensus 159 ~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 238 (240)
T 1gvk_B 159 SSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVIA 238 (240)
T ss_dssp TSTTTTGGGCCTTEEEECCSSSCBCCTTCTTCEEEEEETTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred ccccccCccCCcceEeecCCCCCcccCCCCcCceEEEECCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence 211 111 112344442 457999999999843 56 89999999742 1 1234566778888888887654
No 83
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.41 E-value=7.8e-12 Score=118.50 Aligned_cols=183 Identities=16% Similarity=0.211 Sum_probs=113.2
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-+|.|...... .....|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~~~~----~~~~~CgGtLIs~~-~VLTAAHC~~~~--------~~~~V~~G~~~~~~~~~~~~~~~v~~i~ 78 (236)
T 1elt_A 12 WPWQISLQYKSGS----SYYHTCGGSLIRQG-WVMTAAHCVDSA--------RTWRVVLGEHNLNTNEGKEQIMTVNSVF 78 (236)
T ss_dssp STTEEEEEEEETT----EEEEEEEEEEEETT-EEEECHHHHSSC--------CCEEEEESCSBTTSCCSCCEEECEEEEE
T ss_pred CCCEEEEEEecCC----ceeeEEEEEEEeCC-EEEECHHhhCCc--------CceEEEEccccCCCCCCCcEEEEEEEEE
Confidence 4678888653211 11257999999988 999999999763 345555532 2344555455
Q ss_pred ecC---------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCcc
Q 012318 206 ADF---------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSS 266 (466)
Q Consensus 206 ~d~---------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~ 266 (466)
.|+ .+|||||+|+.+. .+.++.|.... .+..|+.++++||..... ..+....+..+....|
T Consensus 79 ~hp~y~~~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C 158 (236)
T 1elt_A 79 IHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATC 158 (236)
T ss_dssp ECTTCCTTCGGGCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHH
T ss_pred ECCCCCCCCCCCCccEEEEECCCCCccCCcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHh
Confidence 543 5699999999753 35666665433 356789999999986421 2333333333333222
Q ss_pred CCC--CCC-ccccEEEEc---ccCCCCCccceeecC-CC--eEEEEEEeEec-C---CCeeeEEEeHHHHHHHHHHH
Q 012318 267 DLG--LGG-MRREYLQTD---CAINAGNSGGPLVNI-DG--EIVGINIMKVA-A---ADGLSFAVPIDSAAKIIEQF 330 (466)
Q Consensus 267 ~~~--~~~-~~~~~i~~~---~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~-~---~~g~~~aip~~~i~~~l~~l 330 (466)
... ++. .....+... ...|.|+|||||+-. +| .++||++++.. . ...-+.+.-+....+|+++.
T Consensus 159 ~~~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~ 235 (236)
T 1elt_A 159 SSSGWWGSTVKTTMVCAGGGANSGCNGDSGGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGI 235 (236)
T ss_dssp TSTTTTGGGSCTTEEEECCSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred ccccccCCcCCcceEEecCCCCccCCCCCCCeeEEEECCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHhh
Confidence 211 111 112344432 457999999999943 56 89999999742 1 12345667788888888753
No 84
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.41 E-value=2.7e-11 Score=114.48 Aligned_cols=183 Identities=17% Similarity=0.226 Sum_probs=114.7
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC-----CCcEEEEEEEEecC-
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ-----DGRTFEGTVLNADF- 208 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~-----~g~~~~a~vv~~d~- 208 (466)
.|..|.|... +...|+|.+|+++ +|||+|||+..... ...+.|.+. ++..+..+.+..|+
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAhC~~~~~~-----~~~~~v~~G~~~~~~~~~~~v~~i~~hp~ 77 (232)
T 2oq5_A 12 WPWQASLQWD--------GSHRCGATLINAT-WLVSAAHCFTTYKN-----PARWTASFGVTIKPSKMKRGLRRIIVHEK 77 (232)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECGGGGSSCCC-----GGGEEEEESSBSTTCSEEEEEEEEEECTT
T ss_pred CCeeEEEEeC--------CCeeEEEEEEcCC-EEEECHHHcCCCCC-----CceEEEEEeeEECCCceEEeEEEEEeCCC
Confidence 4677888642 2367999999998 99999999976321 134555543 23445555555554
Q ss_pred ------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccCC--CC
Q 012318 209 ------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSDL--GL 270 (466)
Q Consensus 209 ------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~~--~~ 270 (466)
.+|||||+|+.+. .+.++.|.... .+..|+.+++.||.... ...+....+.-+....|.. .+
T Consensus 78 y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 157 (232)
T 2oq5_A 78 YKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAY 157 (232)
T ss_dssp CCTTCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTT
T ss_pred CCCCCCCCCEEEEEecCCCccCCceeEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCcccc
Confidence 4699999999763 34566665432 35679999999997532 2234444444443333321 11
Q ss_pred C-CccccEEEEc-----ccCCCCCccceeecCC--C--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHH
Q 012318 271 G-GMRREYLQTD-----CAINAGNSGGPLVNID--G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 271 ~-~~~~~~i~~~-----~~i~~G~SGGPlvd~~--G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~ 331 (466)
. ......+... ...|.|+|||||+-.+ | .++||++++..-. ..-+.+.-+...++|+++..
T Consensus 158 ~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 230 (232)
T 2oq5_A 158 NDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSKT 230 (232)
T ss_dssp TTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSBTTBCEEEEETGGGHHHHHHHH
T ss_pred CCccCCCEEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCCCCCCCCCeEEEEhHHhHHHHHHHh
Confidence 1 1122344432 3679999999999433 3 6999999975321 22456677888888887654
No 85
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.40 E-value=5.1e-12 Score=120.94 Aligned_cols=184 Identities=16% Similarity=0.165 Sum_probs=113.1
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|.... ....|+|.+|+++ +|||+|||+.+. ..+.|.+.. +..+..+-+.
T Consensus 12 ~Pw~v~l~~~~-------~~~~CgGsLI~~~-~VLTAAHC~~~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 75 (250)
T 1aut_C 12 SPWQVVLLDSK-------KKLACGAVLIHPS-WVLTAAHCMDES--------KKLLVRLGEYDLRRWEKWELDLDIKEVF 75 (250)
T ss_dssp CTTEEEEECTT-------SCEEEEEEEEETT-EEEECGGGSSSC--------SCCEEEESCCBTTCCCTTCEEEEEEEEE
T ss_pred CCCEEEEecCC-------CceEEEEEEeeCC-EEEEChHHcCCC--------CceEEEEcccccCCCCCccEEEEEEEEE
Confidence 46778776321 2367999999988 999999999753 234454432 2345555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCC-----CCCCCCEEEEEecCCCCC----------CceEEeEEe
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS-----KLCPGDWVVAMGCPHSLQ----------NTVTAGIVS 259 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~-----~~~~G~~V~~iG~p~~~~----------~~~t~G~Vs 259 (466)
.|+ .+|||||+|+.+. .+.|+.|.... ....|+.+++.||+.... ..+....+.
T Consensus 76 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~ 155 (250)
T 1aut_C 76 VHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIP 155 (250)
T ss_dssp ECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEE
T ss_pred ECCCCCCCCCCCcEEEEEECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEE
Confidence 554 3699999999763 24456564321 235789999999975321 123333333
Q ss_pred eeecCccCCCCC-CccccEEEE-----cccCCCCCccceeecC-CCe--EEEEEEeEecCC--CeeeEEEeHHHHHHHHH
Q 012318 260 CVDRKSSDLGLG-GMRREYLQT-----DCAINAGNSGGPLVNI-DGE--IVGINIMKVAAA--DGLSFAVPIDSAAKIIE 328 (466)
Q Consensus 260 ~~~~~~~~~~~~-~~~~~~i~~-----~~~i~~G~SGGPlvd~-~G~--VVGI~~~~~~~~--~g~~~aip~~~i~~~l~ 328 (466)
-+....|...+. ......+.. ....|.|+|||||+-. +|+ ++||++++..-. ..-+.+.-+....+|++
T Consensus 156 i~~~~~C~~~~~~~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~ 235 (250)
T 1aut_C 156 VVPHNECSEVMSNMVSENMLCAGILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIH 235 (250)
T ss_dssp EECHHHHHHHCSSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHH
T ss_pred EecHHHhhHHhccCCCCCEEEeCCCCCCCCCCCCCCchheEEEECCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHH
Confidence 333222211111 111234443 2457999999999943 464 999999975421 23456788888999998
Q ss_pred HHHHcC
Q 012318 329 QFKKNG 334 (466)
Q Consensus 329 ~l~~~g 334 (466)
+.++..
T Consensus 236 ~~~~~~ 241 (250)
T 1aut_C 236 GHIRDK 241 (250)
T ss_dssp HHHC--
T ss_pred HHhhcc
Confidence 877554
No 86
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.40 E-value=1.3e-11 Score=117.43 Aligned_cols=188 Identities=16% Similarity=0.143 Sum_probs=115.9
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|..|.|..... .....|+|.+|+++ +|||+|||+.+... ...+.|.+.. ...+..+-+.
T Consensus 12 ~Pw~v~l~~~~~-----~~~~~CgGtLI~~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 80 (241)
T 2any_A 12 WPWQVSLQVKLT-----AQRHLCGGSLIGHQ-WVLTAAHCFDGLPL-----QDVWRIYSGILELSDITKDTPFSQIKEII 80 (241)
T ss_dssp STTEEEEEEESS-----SEEEEEEEEEEETT-EEEECGGGGSSCCC-----STTEEEECSCSBGGGCCTTSCCBCEEEEE
T ss_pred CCcEEEEEEEcC-----CCceEEEEEEecCC-EEEECHHHcCCCCC-----CccEEEEeeeeeccccccCceEEeeEEEE
Confidence 467888865321 12367999999998 99999999975321 1234454421 2233444445
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCccCC
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSDL 268 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~~ 268 (466)
.|+ .+|||||+|+.+. .+.|+.|.... ....|+.+++.||..... ..+....+.-+....|..
T Consensus 81 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 160 (241)
T 2any_A 81 IHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQK 160 (241)
T ss_dssp ECTTCCTTSSSSCCEEEEESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHT
T ss_pred ECCCCCCCCCCCCeEEEEeCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhh
Confidence 544 4699999999763 34566665432 356789999999975422 233444444333332221
Q ss_pred CCC--CccccEEEE-----cccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHHc
Q 012318 269 GLG--GMRREYLQT-----DCAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 269 ~~~--~~~~~~i~~-----~~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~~ 333 (466)
.+. ......+.. ....|.|+|||||+-. +| .++||++++..-. ..-+.+.-+....+|+++..+.
T Consensus 161 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~~ 237 (241)
T 2any_A 161 RYQDYKITQRMVCAGYKEGGKDACKGDSGGPLVCKHNGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKTQS 237 (241)
T ss_dssp TSCTTCSCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHSC
T ss_pred HhccCCCCcCcEeecCCCCCCccCCCCCCCcEEEEECCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHHhhc
Confidence 111 112234443 2357999999999943 35 6999999975321 2345678888899999887654
No 87
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.39 E-value=1.9e-11 Score=116.28 Aligned_cols=188 Identities=20% Similarity=0.219 Sum_probs=115.3
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|..|.|....... .....|+|.+|+++ +|||+|||+.+... ...+.|.+.. +..+..+-+.
T Consensus 12 ~Pw~v~l~~~~~~~---~~~~~CgGtLI~~~-~VLTAAHC~~~~~~-----~~~~~v~~g~~~~~~~~~~~~~~~v~~i~ 82 (247)
T 3mhw_U 12 QPWFAAIYRRHRGG---SVTYVCGGSLISPC-WVISATHCFIDYPK-----KEDYIVYLGRSRLNSNTQGEMKFEVENLI 82 (247)
T ss_dssp STTEEEEEEECTTS---CEEEEEEEEEEETT-EEEECGGGTTTSCC-----GGGEEEEESCCBSSSCCTTCEEEEEEEEE
T ss_pred CCCEEEEEEecCCC---ccceEEEEEEEeCC-EEEEcHHhCcCCCC-----CccEEEEeccccccCCCCCCEEEEEEEEE
Confidence 57788886543211 11357999999988 99999999965321 1345555432 2345555555
Q ss_pred ecCC---------CCEEEEEeCCC--------CCCCccccCCC-CCCCCCCEEEEEecCCCC------CCceEEeEEeee
Q 012318 206 ADFH---------SDIAIVKINSK--------TPLPAAKLGTS-SKLCPGDWVVAMGCPHSL------QNTVTAGIVSCV 261 (466)
Q Consensus 206 ~d~~---------~DlAlLkv~~~--------~~~~~~~l~~s-~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~ 261 (466)
.|+. +|||||+|+.+ ..+.++.|... ..+..|+.+++.||.... ...+....+..+
T Consensus 83 ~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~ 162 (247)
T 3mhw_U 83 LHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLI 162 (247)
T ss_dssp ECTTCEEC-CCEESCCEEEEEECTTSCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEE
T ss_pred ECCCCCCCcCCCCCcEEEEEeCCccccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEE
Confidence 5543 59999999864 23455556442 345679999999997542 223444444444
Q ss_pred ecCccCCC--CC-CccccEEEE-----cccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHH
Q 012318 262 DRKSSDLG--LG-GMRREYLQT-----DCAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIE 328 (466)
Q Consensus 262 ~~~~~~~~--~~-~~~~~~i~~-----~~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~ 328 (466)
....|... .+ ......+.. ....|.|+|||||+-. +| .++||++++..-. ..-+.+..+...++|++
T Consensus 163 ~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~ 242 (247)
T 3mhw_U 163 SHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIR 242 (247)
T ss_dssp CHHHHTSTTTTGGGCCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGCHHHHH
T ss_pred ChHHhcCccccCCcCCCCeEecCCCCCCCccCCCCCCCeEEEEECCCEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHH
Confidence 33333211 11 111234443 2467999999999943 34 5999999975421 23456778888888888
Q ss_pred HHH
Q 012318 329 QFK 331 (466)
Q Consensus 329 ~l~ 331 (466)
+..
T Consensus 243 ~~~ 245 (247)
T 3mhw_U 243 SHT 245 (247)
T ss_dssp HHT
T ss_pred HHh
Confidence 754
No 88
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.39 E-value=4.4e-12 Score=120.61 Aligned_cols=181 Identities=17% Similarity=0.134 Sum_probs=106.7
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEe-------CCCcEEEEEEEEe
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTL-------QDGRTFEGTVLNA 206 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~-------~~g~~~~a~vv~~ 206 (466)
-.|-.|.|.. .+...|+|.+|+++ +|||+|||+... ..+.+-. ..++.+..+-+..
T Consensus 14 ~~Pw~v~l~~--------~~~~~CgGsLIs~~-~VLTAAHC~~~~--------~~v~~G~~~~~~~~~~~~~~~v~~~~~ 76 (240)
T 1sgf_A 14 SQPWHVAVYR--------FNKYQCGGVLLDRN-WVLTAAHCYNDK--------YQVWLGKNNFLEDEPSDQHRLVSKAIP 76 (240)
T ss_dssp CCTTEEEEEC--------TTSCCEEEEECSSS-EEEECGGGCCSC--------CEEEECC----C-CTTCEEEEEEEEEE
T ss_pred CcCCEEEEEe--------CCCeEEEEEEecCC-EEEECHHhCCCC--------ceEEeCCcccccCCCCceEEEEEEEEc
Confidence 4577888831 12367999999988 999999999631 2222211 1123444444443
Q ss_pred cC------------------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC------CceEEeEE
Q 012318 207 DF------------------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ------NTVTAGIV 258 (466)
Q Consensus 207 d~------------------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~------~~~t~G~V 258 (466)
|+ .+|||||+|+.+. .+.|+.|... ....|+.+++.||..... ..+....+
T Consensus 77 Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~ 155 (240)
T 1sgf_A 77 HPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTE-EPKLGSTCLASGWGSTTPIKFKYPDDLQCVNL 155 (240)
T ss_dssp CTTSCGGGC----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCCS-CCCTTCEEEEC-------C---------CEEE
T ss_pred CCCCcccccccccccccCCCCCceEEEEeCCcCcCCCcccccCCCCC-CCCCCCEEEEEecCCCCCCCCCCCccccEEee
Confidence 32 4699999999763 3567777653 457899999999975421 12222333
Q ss_pred eeeecCccCCCCCC-ccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHH
Q 012318 259 SCVDRKSSDLGLGG-MRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQ 329 (466)
Q Consensus 259 s~~~~~~~~~~~~~-~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~ 329 (466)
.-+....|...+.. .....+... ...|.|+|||||+- +|.++||++++.... ..-+.+.-+...++|+++
T Consensus 156 ~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~ 234 (240)
T 1sgf_A 156 KLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRE 234 (240)
T ss_dssp EEECTHHHHTTCSSBCCTTEEEEEECSSSEEECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHH
T ss_pred eEeCHHHhhhhhCCCcCCCeEeEccCCCCCCCCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHH
Confidence 33333222211111 112334332 34799999999995 789999999873311 224567888889999988
Q ss_pred HHHc
Q 012318 330 FKKN 333 (466)
Q Consensus 330 l~~~ 333 (466)
.++.
T Consensus 235 ~~~~ 238 (240)
T 1sgf_A 235 TMAN 238 (240)
T ss_dssp HHHS
T ss_pred HHhc
Confidence 7764
No 89
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.39 E-value=1e-11 Score=118.50 Aligned_cols=181 Identities=18% Similarity=0.252 Sum_probs=112.0
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~---------~g~~~~a~vv~ 205 (466)
.|..|.|.... +...|+|.+|+++ +|||+|||+.+. ...|.+. ..+.+...-+.
T Consensus 27 ~Pw~v~l~~~~-------~~~~CgGtLI~~~-~VLTAAHC~~~~---------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 89 (245)
T 1t8o_A 27 WPWQVSLQDKT-------GFHFCGGSLINEN-WVVTAAHCGVTT---------SDVVVAGEFDQGSSSEKIQKLKIAKVF 89 (245)
T ss_dssp STTEEEEECTT-------CCEEEEEEEEETT-EEEECGGGCCCT---------TSEEEESCSBTTCSSSCCEEEEEEEEE
T ss_pred CCceEEEEcCC-------CCeEEEEEEeeCC-EEEEcHHhCcCC---------CcEEEEeeeecCCCCCCcEEEEEEEEE
Confidence 46778886422 2367999999998 999999998652 1223221 12345555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC------CCceEEeEEeeeecCccC
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSD 267 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~ 267 (466)
.|+ .+|||||+|+.+. .+.++.|.... .+..|+.+++.||.... ...+....+.-+....|.
T Consensus 90 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~ 169 (245)
T 1t8o_A 90 KNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCK 169 (245)
T ss_dssp ECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHH
T ss_pred eCCCCCCCCCCCCEEEEEECCCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhh
Confidence 554 4699999999763 34566665432 35689999999997532 223344444333322221
Q ss_pred CCCC-CccccEEEE---cccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHH
Q 012318 268 LGLG-GMRREYLQT---DCAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 268 ~~~~-~~~~~~i~~---~~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~ 332 (466)
..++ ......+.. ....|.|+|||||+-. +| .++||++++.... ..-+.+.-+....+|+++.++
T Consensus 170 ~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~ 243 (245)
T 1t8o_A 170 KYWGTKIKDAMICAGASGVSSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLA 243 (245)
T ss_dssp HHHGGGCCTTEEEEECSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEGGGTHHHHHHHHH
T ss_pred HhhcCcCCCceEEccCCCCccCcccCcCCEEEEECCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHc
Confidence 1000 011123332 2457999999999943 34 7999999975421 234667888888999888664
No 90
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.38 E-value=3.1e-11 Score=115.17 Aligned_cols=185 Identities=17% Similarity=0.204 Sum_probs=115.8
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|... ...|+|.+|+++ ||||+|||+.+... ...+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~---------~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~V~~G~~~~~~~~~~~~~~~v~~i~ 76 (248)
T 2r0l_A 12 HPWLAAIYIG---------DSFCAGSLVHTC-WVVSAAHCFSHSPP-----RDSVSVVLGQHFFNRTTDVTQTFGIEKYI 76 (248)
T ss_dssp STTEEEEEET---------TEEEEEEEEETT-EEEECGGGGTTCCC-----GGGEEEEESCCBTTCCCSSCEEECEEEEE
T ss_pred CCeEEEEEcC---------CceEEEEEEcCC-EEEECHHHcCCCCC-----cCcEEEEEEeEEcCCCCCccEEEeeeEEE
Confidence 4667777542 257999999988 99999999975311 1356666532 2344444444
Q ss_pred ecC--------CCCEEEEEeCCC--------CCCCccccCCC-CCCCCCCEEEEEecCCCC------CCceEEeEEeeee
Q 012318 206 ADF--------HSDIAIVKINSK--------TPLPAAKLGTS-SKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVD 262 (466)
Q Consensus 206 ~d~--------~~DlAlLkv~~~--------~~~~~~~l~~s-~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~ 262 (466)
.++ .+|||||+|+.+ ..+.++.|... ..+..|+.+++.||.... ...+....+.-+.
T Consensus 77 ~hp~y~~~~~~~~DiALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~ 156 (248)
T 2r0l_A 77 PYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVA 156 (248)
T ss_dssp ECTTCCTTSTTTTCCEEEEECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCC
T ss_pred eCCccCcCCCCCCCEEEEEeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeC
Confidence 332 469999999865 23456666543 345679999999997532 2234444444443
Q ss_pred cCccCCC--CCC-ccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHH
Q 012318 263 RKSSDLG--LGG-MRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQ 329 (466)
Q Consensus 263 ~~~~~~~--~~~-~~~~~i~~~-----~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~ 329 (466)
...|... ++. .....+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+..+....+|+++
T Consensus 157 ~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 236 (248)
T 2r0l_A 157 DHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWIND 236 (248)
T ss_dssp HHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHH
T ss_pred HHHhCCccccCCcCCCCEEeECCCCCCCcCCCCccCCeEEEEECCcEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHHHHH
Confidence 3333211 111 112344442 457999999999944 35 6999999975321 234667888889999988
Q ss_pred HHHcC
Q 012318 330 FKKNG 334 (466)
Q Consensus 330 l~~~g 334 (466)
.++..
T Consensus 237 ~~~~~ 241 (248)
T 2r0l_A 237 RIRPP 241 (248)
T ss_dssp HHC--
T ss_pred HhcCC
Confidence 77544
No 91
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.38 E-value=6.9e-12 Score=120.08 Aligned_cols=191 Identities=15% Similarity=0.123 Sum_probs=111.9
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCC----------cEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG----------RTFEGTVL 204 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g----------~~~~a~vv 204 (466)
.|..|.|.... .....|+|.+|+++ +|||+|||+.............+.|.+... +....+-+
T Consensus 12 ~Pw~v~l~~~~------~~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i 84 (259)
T 3rm2_H 12 SPWQVMLFRKS------PQELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKI 84 (259)
T ss_dssp STTEEEEEEET------TEEEEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEE
T ss_pred cCCEEEEEECC------CCceEEEEEEEeCC-EEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEE
Confidence 46778885322 12357999999988 999999999532111111123455655321 12224444
Q ss_pred EecC--------CCCEEEEEeCCCC----CCCccccCCCC----CCCCCCEEEEEecCCCC-----------CCceEEeE
Q 012318 205 NADF--------HSDIAIVKINSKT----PLPAAKLGTSS----KLCPGDWVVAMGCPHSL-----------QNTVTAGI 257 (466)
Q Consensus 205 ~~d~--------~~DlAlLkv~~~~----~~~~~~l~~s~----~~~~G~~V~~iG~p~~~-----------~~~~t~G~ 257 (466)
..|+ .+|||||+|+.+. .+.|+.|.... .+..|..+.+.||.... ...+....
T Consensus 85 ~~hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~~~~ 164 (259)
T 3rm2_H 85 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVN 164 (259)
T ss_dssp EECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCEEEE
T ss_pred EECCCCCCCCCCCCcEEEEEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccceEEE
Confidence 4443 3599999999753 34556664321 13578999999997532 12233333
Q ss_pred EeeeecCccCCCCC-CccccEEEEc--------ccCCCCCccceeecC---CC--eEEEEEEeEecCC--CeeeEEEeHH
Q 012318 258 VSCVDRKSSDLGLG-GMRREYLQTD--------CAINAGNSGGPLVNI---DG--EIVGINIMKVAAA--DGLSFAVPID 321 (466)
Q Consensus 258 Vs~~~~~~~~~~~~-~~~~~~i~~~--------~~i~~G~SGGPlvd~---~G--~VVGI~~~~~~~~--~g~~~aip~~ 321 (466)
+..+....|...+. ......+... ...|.|+|||||+-. +| .++||++++..-. ...+.+.-+.
T Consensus 165 ~~~~~~~~C~~~~~~~~~~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~ 244 (259)
T 3rm2_H 165 LPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVF 244 (259)
T ss_dssp EEBCCHHHHHHTCSSCCCTTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETG
T ss_pred EEEeCHHHhhhhhcccCCCceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHH
Confidence 33333222211111 1122344442 268999999999943 23 7999999975422 2245678888
Q ss_pred HHHHHHHHHHH
Q 012318 322 SAAKIIEQFKK 332 (466)
Q Consensus 322 ~i~~~l~~l~~ 332 (466)
..++|+++.++
T Consensus 245 ~~~~WI~~~i~ 255 (259)
T 3rm2_H 245 RLKKWIQKVID 255 (259)
T ss_dssp GGHHHHHHHHH
T ss_pred HhHHHHHHHHH
Confidence 88898888754
No 92
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.38 E-value=1.1e-12 Score=108.88 Aligned_cols=100 Identities=13% Similarity=0.158 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHcCCccccccccccccccceeeeeeeeeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccC
Q 012318 320 IDSAAKIIEQFKKNGWMHVEQKVPLLWSTCKQVVILCRRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVT 399 (466)
Q Consensus 320 ~~~i~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~ 399 (466)
.+.++++.+++++++ +..++++|+...... ....|+.|..+.
T Consensus 4 ~~~~~~~~~~l~~~~-----------------------~~~~~~~g~~~~~~~---------------~~~~G~~V~~~~ 45 (105)
T 2i4s_A 4 EDKVDAIREAIARNP-----------------------QEIFQYVRLSQVKRD---------------DKVLGYRVSPGK 45 (105)
T ss_dssp HHHHHHHHHHHHHSG-----------------------GGHHHHEEEEEEEET---------------TEEEEEEEEECS
T ss_pred hHHHHHHHHHHHHCH-----------------------HHHHhhceeEEEecC---------------CcEEEEEEecCC
Confidence 467888999999999 677889998754210 113578888888
Q ss_pred CCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEE
Q 012318 400 PGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVI 458 (466)
Q Consensus 400 ~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~ 458 (466)
+.|||+++||++||+|++|||++|.+|+++.+++.. ..|+.+.|+|.| +|+.+++.++
T Consensus 46 pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R-~g~~~~~~v~ 104 (105)
T 2i4s_A 46 DPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVER-DGQQHDVYIQ 104 (105)
T ss_dssp CTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEE-TTEEEEEEEE
T ss_pred CCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEE-CCEEEEEEEe
Confidence 888999999999999999999999999999988876 678999999999 8888877765
No 93
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.37 E-value=4.1e-11 Score=114.42 Aligned_cols=186 Identities=19% Similarity=0.237 Sum_probs=115.1
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|.... +...|+|.+|+++ ||||+|||+.+... ...+.|.+.. .+.+...-+.
T Consensus 29 ~Pw~v~l~~~~-------~~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~v~~~~ 95 (247)
T 1ddj_A 29 WPWQVSLRTRF-------GMHFCGGTLISPE-WVLTAAHCLEKSPR-----PSSYKVILGAHQEVNLEPHVQEIEVSRLF 95 (247)
T ss_dssp STTEEEEECTT-------SCEEEEEEEEETT-EEEECGGGGTTCSC-----GGGCEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred CCcEEEEEcCC-------CCeEEEEEEeeCC-EEEEcHHHcCCCCC-----CccEEEEEcccccCccCCceEEEEeeeEE
Confidence 46788886421 2367999999988 99999999975311 1234444421 1344444444
Q ss_pred ecC-CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC----CceEEeEEeeeecCccCC---CCCC
Q 012318 206 ADF-HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ----NTVTAGIVSCVDRKSSDL---GLGG 272 (466)
Q Consensus 206 ~d~-~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~~~~~~~---~~~~ 272 (466)
.++ .+|||||+|+.+. .+.|+.|.... .+..++.+++.||..... ..+....+.-+....|.. ....
T Consensus 96 ~hp~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~ 175 (247)
T 1ddj_A 96 LEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGR 175 (247)
T ss_dssp ECTTSCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTC
T ss_pred cCCCCCcEEEEEeCCceeeCCCEEeeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCC
Confidence 554 6899999999762 34566665432 356789999999976432 234444444333332221 0111
Q ss_pred ccccEEEEc-----ccCCCCCccceeecCC-C--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHHc
Q 012318 273 MRREYLQTD-----CAINAGNSGGPLVNID-G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 273 ~~~~~i~~~-----~~i~~G~SGGPlvd~~-G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~~ 333 (466)
.....+... ...|.|+|||||+-.+ | .++||++++..-. ..-+.+.-+....+|+++.+++
T Consensus 176 ~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~ 246 (247)
T 1ddj_A 176 VQSTELCAGHLAGGTDSCQGDAGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMRN 246 (247)
T ss_dssp CCTTEEEESCSSSCCCBCCSCTTCEEEEECSSSEEEEEEECGGGCCBBTTBCEEEEEGGGSHHHHHHHHHT
T ss_pred CcCCeEeecCCCCCCccccCcCcCcEEEEECCcEEEEEEEEECCCCCCCCCCEEEEEhHHhHHHHHHHhhc
Confidence 122344442 3579999999999432 3 6999999875321 2345667888889999887653
No 94
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.37 E-value=1.3e-11 Score=117.26 Aligned_cols=187 Identities=19% Similarity=0.174 Sum_probs=114.5
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~---------~g~~~~a~vv~ 205 (466)
.|-.|.|..... .....|+|.+|+++ +|||+|||+.+... ...+.|.+. +.+.+..+-+.
T Consensus 12 ~Pw~v~l~~~~~-----~~~~~CgGtLI~~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 80 (238)
T 3bg8_A 12 WPWQVTLHTTSP-----TQRHLCGGSIIGNQ-WILTAAHCFYGVES-----PKILRVYSGILNQSEIKEDTSFFGVQEII 80 (238)
T ss_dssp STTEEEEEECSS-----SCEEEEEEEEEETT-EEEECGGGGTTCCC-----GGGEEEECSCSBGGGCCTTSCCEEEEEEE
T ss_pred cCcEEEEEeecC-----CCcEEEEEEEeeCC-EEEECHHHCCCCCC-----CceEEEEEeeccCCcCCCCceEEeeEEEE
Confidence 467788865321 12367999999988 99999999975321 134555542 23445555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccC-
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD- 267 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~- 267 (466)
.|+ .+|||||+|+.+. .+.|+.|.... ....++.+++.||.... ...+....+.-+....|.
T Consensus 81 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 160 (238)
T 3bg8_A 81 IHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQK 160 (238)
T ss_dssp ECTTCCCGGGSCCCEEEEESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHH
T ss_pred ECCCCCCCCCCCcEEEEEECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhh
Confidence 554 4699999999763 34566665432 25678899999997532 123333333323222221
Q ss_pred -CCCCCccccEEEE-----cccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHH
Q 012318 268 -LGLGGMRREYLQT-----DCAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 268 -~~~~~~~~~~i~~-----~~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~ 332 (466)
+.........+.. ....|.|+|||||+-. +| .++||++++..-. ..-+.+.-+....+|+++..+
T Consensus 161 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 236 (238)
T 3bg8_A 161 RYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ 236 (238)
T ss_dssp HCTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred hhcCCCCCCCeEeecCCCCCCCcCCCCCCcceEEEECCeEEEEEEEEECCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence 1110112234443 2357999999999943 34 5999999975321 224566778888888887653
No 95
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.37 E-value=1e-11 Score=121.60 Aligned_cols=192 Identities=15% Similarity=0.128 Sum_probs=113.4
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC----------CcEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD----------GRTFEGTVL 204 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~----------g~~~~a~vv 204 (466)
.|-.|.|.... .+...|.|.+|+++ ||||+|||+.............+.|.+.. .+.+..+-+
T Consensus 42 ~Pw~v~l~~~~------~~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i 114 (289)
T 2bdy_A 42 SPWQVMLFRKS------PQELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKI 114 (289)
T ss_dssp CTTEEEEEETT------TTEEEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEE
T ss_pred CCCeEEEEECC------CCCEEEEEEEecCC-EEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceeeeeEEE
Confidence 46778875321 12367999999988 99999999953110000112345565532 123344444
Q ss_pred EecC--------CCCEEEEEeCCCC----CCCccccCCCCC----CCCCCEEEEEecCCCC-----------CCceEEeE
Q 012318 205 NADF--------HSDIAIVKINSKT----PLPAAKLGTSSK----LCPGDWVVAMGCPHSL-----------QNTVTAGI 257 (466)
Q Consensus 205 ~~d~--------~~DlAlLkv~~~~----~~~~~~l~~s~~----~~~G~~V~~iG~p~~~-----------~~~~t~G~ 257 (466)
..|+ .+|||||+|+.+. .+.|+.|..... +..|..+++.||.... ...+....
T Consensus 115 ~~Hp~y~~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~L~~~~ 194 (289)
T 2bdy_A 115 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVN 194 (289)
T ss_dssp EECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSBCEEEE
T ss_pred EECCCCCCCCCCCCeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCccccccccceEEE
Confidence 4443 3699999999763 345666654221 4678999999997532 12233333
Q ss_pred EeeeecCccCCCCC-CccccEEEE--------cccCCCCCccceeecC---CC--eEEEEEEeEecCC--CeeeEEEeHH
Q 012318 258 VSCVDRKSSDLGLG-GMRREYLQT--------DCAINAGNSGGPLVNI---DG--EIVGINIMKVAAA--DGLSFAVPID 321 (466)
Q Consensus 258 Vs~~~~~~~~~~~~-~~~~~~i~~--------~~~i~~G~SGGPlvd~---~G--~VVGI~~~~~~~~--~g~~~aip~~ 321 (466)
+.-+....|...+. .....+|.. ....|.|+|||||+-. +| .++||++++..-. ..-+.+.-+.
T Consensus 195 v~i~~~~~C~~~~~~~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~ 274 (289)
T 2bdy_A 195 LPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVF 274 (289)
T ss_dssp EEBCCHHHHHHTCSSCCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETG
T ss_pred EEEECHHHhhccccCcCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEHH
Confidence 33333222211111 112234544 2357999999999942 34 5999999975321 2245678888
Q ss_pred HHHHHHHHHHHc
Q 012318 322 SAAKIIEQFKKN 333 (466)
Q Consensus 322 ~i~~~l~~l~~~ 333 (466)
...+|+++.++.
T Consensus 275 ~y~~WI~~~i~~ 286 (289)
T 2bdy_A 275 RLKKWIQKVIDQ 286 (289)
T ss_dssp GGHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 899999887653
No 96
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.37 E-value=1.4e-11 Score=118.25 Aligned_cols=185 Identities=18% Similarity=0.207 Sum_probs=115.0
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|..|.|... +...|+|.+|+++ +|||+|||+..... ...+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAhC~~~~~~-----~~~~~v~~g~~~~~~~~~~~~~~~v~~i~ 77 (261)
T 3gyl_B 12 WPWQVSITYE--------GVHVCGGSLVSEQ-WVLSAAHCFPSEHH-----KEAYEVKLGAHQLDSYSEDAKVSTLKDII 77 (261)
T ss_dssp STTEEEEEET--------TEEEEEEEECSSS-EEEECGGGSCTTSC-----GGGEEEEESCSBTTSCCSSCEEECEEEEE
T ss_pred CCcEEEEeeC--------CceEEEEEEEcCC-EEEECHHHCCCCCC-----cccEEEEeCceeccCCCCCceEEEEEEEE
Confidence 4667888642 2367999999988 99999999964211 1345565532 1244555555
Q ss_pred ecCC-------CCEEEEEeCCCC----CCCccccCCC-CCCCCCCEEEEEecCCCC-------CCceEEeEEeeeecCcc
Q 012318 206 ADFH-------SDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSL-------QNTVTAGIVSCVDRKSS 266 (466)
Q Consensus 206 ~d~~-------~DlAlLkv~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~-------~~~~t~G~Vs~~~~~~~ 266 (466)
.|+. +|||||+|+.+. .+.++.|... ..+..|+.+++.||.... ...+....+.-+....|
T Consensus 78 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C 157 (261)
T 3gyl_B 78 PHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETC 157 (261)
T ss_dssp ECTTCCSTTCSCCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHH
T ss_pred ECCCcCCCCCCCcEEEEEECCCccCCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHh
Confidence 5553 599999999753 3456666442 345679999999997532 22334444433332222
Q ss_pred CC--C-------CCCccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHH
Q 012318 267 DL--G-------LGGMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKII 327 (466)
Q Consensus 267 ~~--~-------~~~~~~~~i~~~-----~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l 327 (466)
.. . ........+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+...++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~v~~~~~WI 237 (261)
T 3gyl_B 158 NSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWI 237 (261)
T ss_dssp HHHHTTTCCTTCCCCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCCSSCTTCCEEEEEGGGGHHHH
T ss_pred hhhhcccccccccccccCCeEeeCCCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCCCCCCCCCCEEEEHHHhHHHH
Confidence 10 0 001122344442 457999999999943 35 6999999875421 2345678888888888
Q ss_pred HHHHHc
Q 012318 328 EQFKKN 333 (466)
Q Consensus 328 ~~l~~~ 333 (466)
++.++.
T Consensus 238 ~~~i~~ 243 (261)
T 3gyl_B 238 QSKVTE 243 (261)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 887654
No 97
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.37 E-value=1.4e-11 Score=116.71 Aligned_cols=183 Identities=19% Similarity=0.184 Sum_probs=112.0
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-------CcEEEEEEEEec
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GRTFEGTVLNAD 207 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-------g~~~~a~vv~~d 207 (466)
.|..|.|. +...|+|.+|+++ +|||+|||+.+... ....+.|.+.. ...+..+.+..|
T Consensus 12 ~Pw~v~l~----------~~~~CgGtLI~~~-~VLTAAhC~~~~~~----~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h 76 (242)
T 3tvj_B 12 FPWQVLIL----------GGTTAAGALLYDN-WVLTAAHAVYEQKH----DASALDIRMGTLKRLSPHYTQAWSEAVFIH 76 (242)
T ss_dssp STTEEEEE----------SSEEEEEEEETTT-EEEECHHHHSTTTT----CSSCCEEEESCSBTTCSCCEEEEEEEEEEC
T ss_pred CCCEEEEe----------cCCcEEEEEecCC-EEEECHHHCCCCCC----CcceEEEEeccccccCcccceeeEEEEEeC
Confidence 46677775 1256999999988 99999999965211 11344555432 133444444444
Q ss_pred C--------CCCEEEEEeCCCC----CCCccccCCCC---CCCCCCEEEEEecCCCC----CCceEEeEEeeeecCccCC
Q 012318 208 F--------HSDIAIVKINSKT----PLPAAKLGTSS---KLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDL 268 (466)
Q Consensus 208 ~--------~~DlAlLkv~~~~----~~~~~~l~~s~---~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~ 268 (466)
+ .+|||||+|+.+. .+.++.|.... .+..|+.+.+.||.... ...+....+.-+....|..
T Consensus 77 p~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~ 156 (242)
T 3tvj_B 77 EGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTA 156 (242)
T ss_dssp TTCCTTSCSTTCCEEEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHH
T ss_pred CCCCCCCCCcCcEEEEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHH
Confidence 3 4699999999752 45667775533 26789999999997643 2233344443333222210
Q ss_pred C-------CCCccccEEEE-----cccCCCCCccceeecC---CC--eEEEEEEeEecCC---CeeeEEEeHHHHHHHHH
Q 012318 269 G-------LGGMRREYLQT-----DCAINAGNSGGPLVNI---DG--EIVGINIMKVAAA---DGLSFAVPIDSAAKIIE 328 (466)
Q Consensus 269 ~-------~~~~~~~~i~~-----~~~i~~G~SGGPlvd~---~G--~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~ 328 (466)
. ........+.. ....|.|+|||||+-. +| .++||++++.... ..-+.+..+...++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~ 236 (242)
T 3tvj_B 157 AYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIE 236 (242)
T ss_dssp HHHSTTSCTTCCCTTEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHH
T ss_pred hhccCCcccccccCCeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHH
Confidence 0 00112234444 2467999999999842 33 4999999984322 22366788888888888
Q ss_pred HHHH
Q 012318 329 QFKK 332 (466)
Q Consensus 329 ~l~~ 332 (466)
+.++
T Consensus 237 ~~i~ 240 (242)
T 3tvj_B 237 NIIS 240 (242)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
No 98
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.36 E-value=4.9e-11 Score=113.96 Aligned_cols=189 Identities=19% Similarity=0.193 Sum_probs=116.0
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|....... ......|+|.+|+++ +|||+|||+.+.. ....+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~~~~~--~~~~~~CgGtLI~~~-~VLTAAHC~~~~~-----~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~ 83 (252)
T 1rtf_B 12 HPWQAAIFAKHRRS--PGERFLCGGILISSC-WILSAAHCFQERF-----PPHHLTVILGRTYRVVPGEEEQKFEVEKYI 83 (252)
T ss_dssp STTEEEEEEEC------CEEEEEEEEECSSS-EEEECGGGGTTCC-----CGGGEEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred cCCEEEEEEecCCC--CCCCEEEEEEEEeCC-EEEECHHHCCCCC-----CcccEEEEeCcccccCCCCcceEEEEEEEE
Confidence 47788886532110 122367999999988 9999999997531 11345665532 2445555555
Q ss_pred ecC-------CCCEEEEEeCCC--------CCCCccccCCCC-CCCCCCEEEEEecCCCC------CCceEEeEEeeeec
Q 012318 206 ADF-------HSDIAIVKINSK--------TPLPAAKLGTSS-KLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDR 263 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~--------~~~~~~~l~~s~-~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~ 263 (466)
.|+ .+|||||+|+.+ ..+.++.|.... .+..++.+.+.||.... ...+....+.-+..
T Consensus 84 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~ 163 (252)
T 1rtf_B 84 VHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPS 163 (252)
T ss_dssp ECTTCCTTTCTTCCEEEEECCSSSCCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECCG
T ss_pred eCCCCCcCCCCCCEEEEEECCccccccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEecH
Confidence 554 469999999865 234566665432 35578999999997532 22344444544444
Q ss_pred CccCCCC--C-CccccEEEEc-----------ccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHH
Q 012318 264 KSSDLGL--G-GMRREYLQTD-----------CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAA 324 (466)
Q Consensus 264 ~~~~~~~--~-~~~~~~i~~~-----------~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~ 324 (466)
..|.... . ......+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+....
T Consensus 164 ~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~ 243 (252)
T 1rtf_B 164 SRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYL 243 (252)
T ss_dssp GGSSTTTTTTCCCCTTEEEEECCC------CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGH
T ss_pred HHhhhhhccCCCCCCCEEEecCCCCCCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCCCCCCCCCeEEEEHHHHH
Confidence 4443211 1 1122344432 467999999999943 35 7999999975421 2245667788888
Q ss_pred HHHHHHH
Q 012318 325 KIIEQFK 331 (466)
Q Consensus 325 ~~l~~l~ 331 (466)
+|+++.+
T Consensus 244 ~WI~~~~ 250 (252)
T 1rtf_B 244 DWIRDNM 250 (252)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 8887653
No 99
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.36 E-value=4.5e-11 Score=116.13 Aligned_cols=189 Identities=16% Similarity=0.142 Sum_probs=111.7
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-------------------
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------------------- 195 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~------------------- 195 (466)
.|-.|.|....... .....|+|.+|+++ ||||+|||+.+... ......+.|.+..
T Consensus 34 ~Pw~v~l~~~~~~~---~~~~~CgGsLIs~~-~VLTAAHC~~~~~~--~~~~~~~~V~~G~~~~~~~~~~~~~~~~~~~~ 107 (278)
T 2olg_A 34 FPWTAMIGYKNSSN---FEQFACGGSLINNR-YIVTAAHCVAGRVL--RVVGALNKVRLGEWNTATDPDCYGAVRVCVPD 107 (278)
T ss_dssp STTEEEEEEECTTC---CEEEEEEEEECSSS-EEEECGGGTSTHHH--HHTCEEEEEEESCSBTTCSSCEETTTTEECSS
T ss_pred CCceEEEEEecCCC---CcceeEEEEEEeCC-EEEEhHHhCCCccc--ccccceeEEEeCcccCCCCccccccccccCCC
Confidence 46788886533211 12367999999988 99999999964100 0000234444421
Q ss_pred -CcEEEEEEEEecC---------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC----CceEEe
Q 012318 196 -GRTFEGTVLNADF---------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ----NTVTAG 256 (466)
Q Consensus 196 -g~~~~a~vv~~d~---------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~----~~~t~G 256 (466)
...+..+-+..|+ .+|||||+|+.+. .+.|+.|.... .+..|+.+++.||..... ..+...
T Consensus 108 ~~~~~~v~~i~~Hp~y~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l~~~ 187 (278)
T 2olg_A 108 KPIDLGIEETIQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKL 187 (278)
T ss_dssp CCEEECEEEEEECTTCCTTCSSCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBCEEE
T ss_pred CceEEeeEEEEECCCCcCCCCCCCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchhhcc
Confidence 2234444444443 4799999999762 35666675433 457899999999975422 233344
Q ss_pred EEeeeecCccCCCCC----CccccEEEEc----ccCCCCCccceeecC--CC--eEEEEEEeEecCC--CeeeEEEeHHH
Q 012318 257 IVSCVDRKSSDLGLG----GMRREYLQTD----CAINAGNSGGPLVNI--DG--EIVGINIMKVAAA--DGLSFAVPIDS 322 (466)
Q Consensus 257 ~Vs~~~~~~~~~~~~----~~~~~~i~~~----~~i~~G~SGGPlvd~--~G--~VVGI~~~~~~~~--~g~~~aip~~~ 322 (466)
.+.-+....|...+. ......+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+..
T Consensus 188 ~~~i~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~ 267 (278)
T 2olg_A 188 AVPVVHAEQCAKTFGAAGVRVRSSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGK 267 (278)
T ss_dssp EEEBCCGGGGGGGGSSTTCCCCTTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCBCSTTCBCEEEEEGGG
T ss_pred cccccCHHHHHHHhccccccCCCceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCCCCCCCCCcEEeEHHH
Confidence 444333333321111 1122344442 357999999999943 34 6999999975322 12355677777
Q ss_pred HHHHHHH
Q 012318 323 AAKIIEQ 329 (466)
Q Consensus 323 i~~~l~~ 329 (466)
..+|+++
T Consensus 268 y~~WI~~ 274 (278)
T 2olg_A 268 YRDWIEG 274 (278)
T ss_dssp GHHHHHT
T ss_pred HHHHHHH
Confidence 7877765
No 100
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.36 E-value=7.7e-12 Score=118.93 Aligned_cols=184 Identities=22% Similarity=0.251 Sum_probs=113.2
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|.... +...|+|.+|+++ +|||+|||+... ..+.|.+.. .+.+..+.+.
T Consensus 12 ~Pw~v~l~~~~-------~~~~CgGtLIs~~-~VLTAAhC~~~~--------~~~~V~~G~~~~~~~~~~~~~~~v~~i~ 75 (241)
T 2jkh_A 12 CPWQALLINEE-------NEGFCGGTILSEF-YILTAAHCLYQA--------KRFKVRVGDRNTEQEEGGEAVHEVEVVI 75 (241)
T ss_dssp STTEEEEECTT-------SCEEEEEEECSSS-EEEECGGGGGSC--------SSCEEEESCSBTTCCCSCCEEECEEEEE
T ss_pred cCcEEEEEcCC-------CCcEEEEEEeeCC-EEEEcHHHcCCC--------CcEEEEECCccCCCCCCCcEEEEeEEEE
Confidence 46677776321 2367999999988 999999999763 234454432 2344555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCC----CCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCc
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS----KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKS 265 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~----~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~ 265 (466)
.|+ .+|||||+|+.+. .+.|+.|.... .+..++.+++.||..... ..+....+..+....
T Consensus 76 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~ 155 (241)
T 2jkh_A 76 KHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNS 155 (241)
T ss_dssp ECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHH
T ss_pred eCCCCCCCCCCCcEEEEEECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHH
Confidence 554 4699999999763 34566664421 145789999999975321 233344444333322
Q ss_pred cCCCCC-CccccEEEE-----cccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHHcC
Q 012318 266 SDLGLG-GMRREYLQT-----DCAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 266 ~~~~~~-~~~~~~i~~-----~~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~~g 334 (466)
|..... ......+.. ....|.|+|||||+-. +| .++||++++..-. ...+.+.-+....+|+++.++..
T Consensus 156 C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~~ 235 (241)
T 2jkh_A 156 CKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTR 235 (241)
T ss_dssp HHHHCSSCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHTC--
T ss_pred hcccccCcCCCCeEEeeCCCCCCccCcCcCCCeeEEEECCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHHhccc
Confidence 221111 111234443 2357999999999953 35 5999999975422 22466788888999998876544
No 101
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.35 E-value=3.4e-11 Score=115.29 Aligned_cols=184 Identities=19% Similarity=0.240 Sum_probs=112.5
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC----------CcEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD----------GRTFEGTVL 204 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~----------g~~~~a~vv 204 (466)
.|-.|.|...... .....|+|.+|+++ +|||+|||+.+. ..+.|.+.. ...+..+.+
T Consensus 25 ~Pw~v~l~~~~~~----~~~~~CgGtLIs~~-~VLTAAHC~~~~--------~~~~V~~G~~~~~~~~~~~~~~~~v~~i 91 (251)
T 1pyt_D 25 WPWQISLQYLRDN----TWRHTCGGTLITPN-HVLTAAHCISNT--------LTYRVALGKNNLEVEDEAGSLYVGVDTI 91 (251)
T ss_dssp STTEEEEEEEETT----EEEEEEEEEEEETT-EEEECGGGCCTT--------CCEEEEESCSBTTCSCCSSCEEEEEEEE
T ss_pred CCceEEEEEEcCC----CcceEEEeEEecCC-EEEECHHHhCCC--------ceEEEEEcccccccCCCCCcEEEEEEEE
Confidence 4678888643211 12367999999988 999999999753 345555432 123455555
Q ss_pred EecC-------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCccC
Q 012318 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSD 267 (466)
Q Consensus 205 ~~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~ 267 (466)
..|+ .+|||||+|+.+. .+.++.|.... .+..+..+++.||..... ..+....+..+....+.
T Consensus 92 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~ 171 (251)
T 1pyt_D 92 FVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCS 171 (251)
T ss_dssp EECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHT
T ss_pred EECCCCCCCCCCCCEEEEEECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcc
Confidence 5554 4699999999763 35666665432 346789999999975422 12223333323222222
Q ss_pred CC--CC-CccccEEEEc----ccCCCCCccceeecC-CC--eEEEEEEeEec-CC---CeeeEEEeHHHHHHHHHHHH
Q 012318 268 LG--LG-GMRREYLQTD----CAINAGNSGGPLVNI-DG--EIVGINIMKVA-AA---DGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 268 ~~--~~-~~~~~~i~~~----~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~-~~---~g~~~aip~~~i~~~l~~l~ 331 (466)
.. .+ ......+... ...|.|+|||||+-. +| .++||++++.. .. ..-+.+.-+....+|+++.+
T Consensus 172 ~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~ 249 (251)
T 1pyt_D 172 QRDWWGTTVKETMVCAGGDGVISACNGDSGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKL 249 (251)
T ss_dssp STTTTTTTCCTTEEEECCSCSSCCCCSCTTCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHHT
T ss_pred hhhccCCCcCCCeEEecCCCCCccCCCCCCCceEEEECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 11 11 1122344442 357999999999943 45 79999999752 11 22456677888888887653
No 102
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.35 E-value=3.3e-11 Score=116.81 Aligned_cols=190 Identities=20% Similarity=0.209 Sum_probs=116.1
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv 204 (466)
-.|..|.|....... .....|+|.+|+++ ||||+|||+.+... ...+.|.+.. +..+..+-+
T Consensus 34 ~~Pw~v~l~~~~~~~---~~~~~CgGtLI~~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~v~~i 104 (276)
T 2jde_A 34 NQPWFAAIYRRHRGG---SVTYVCGGSLMSPC-WVISATHCFIDYPK-----KEDYIVYLGRSRLNSNTQGEMKFEVENL 104 (276)
T ss_dssp GSTTEEEEEEECCCC---CEEEEEEEEEEETT-EEEECGGGTTTSCC-----GGGEEEEESCCBSSSCCTTCEEEEEEEE
T ss_pred CCCeEEEEEEecCCC---ccceeeeeEEeeCC-EEEEcHHhccCCCC-----cccEEEEecccccCCCCCCcEEEEEEEE
Confidence 367888886533211 11357999999988 99999999965321 1345555432 234555555
Q ss_pred EecCC---------CCEEEEEeCCC--------CCCCccccCCC-CCCCCCCEEEEEecCCCC------CCceEEeEEee
Q 012318 205 NADFH---------SDIAIVKINSK--------TPLPAAKLGTS-SKLCPGDWVVAMGCPHSL------QNTVTAGIVSC 260 (466)
Q Consensus 205 ~~d~~---------~DlAlLkv~~~--------~~~~~~~l~~s-~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~ 260 (466)
..|+. +|||||+|+.+ ..+.++.|... ..+..|+.+++.||.... ...+....+..
T Consensus 105 ~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~ 184 (276)
T 2jde_A 105 ILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKL 184 (276)
T ss_dssp EECTTCEECSSCEESCCEEEEEECTTSCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEE
T ss_pred EECCCCCCCCCcCCCcEEEEEeCCccccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhceecc
Confidence 55542 59999999864 23455556432 346679999999997542 22344444444
Q ss_pred eecCccCCC--CC-CccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHH
Q 012318 261 VDRKSSDLG--LG-GMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKII 327 (466)
Q Consensus 261 ~~~~~~~~~--~~-~~~~~~i~~~-----~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l 327 (466)
+....|... ++ ......+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+....+|+
T Consensus 185 ~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI 264 (276)
T 2jde_A 185 ISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 264 (276)
T ss_dssp ECHHHHTSTTTTGGGSCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHH
T ss_pred cChHHhCcccccCccCCCCeEEecCCCCCCcccccccCcceEEEeCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHH
Confidence 433333211 11 1112344432 467999999999943 34 5999999975422 2346678888888888
Q ss_pred HHHHH
Q 012318 328 EQFKK 332 (466)
Q Consensus 328 ~~l~~ 332 (466)
++..+
T Consensus 265 ~~~~~ 269 (276)
T 2jde_A 265 RSHTK 269 (276)
T ss_dssp HHTC-
T ss_pred HHHhh
Confidence 87543
No 103
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.35 E-value=1.4e-11 Score=116.34 Aligned_cols=183 Identities=17% Similarity=0.210 Sum_probs=111.8
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC----------CcEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD----------GRTFEGTVL 204 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~----------g~~~~a~vv 204 (466)
.|..|.|... +...|+|.+|+++ +|||+|||+.+... ....+.+.+.. ...+..+-+
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~~~----~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i 78 (235)
T 4dgj_A 12 WPWVVGLYYD--------DRLLCGASLVSSD-WLVSAAHCVYGRNL----EPSKWTAILGLHMKSNLTSPQTVPRLIDEI 78 (235)
T ss_dssp STTEEEEEET--------TEEEEEEEECSSS-EEEECHHHHTTSCS----SGGGEEEEESCCBTTCCSCTTCEEEEEEEE
T ss_pred CCcEEEEeeC--------CCeEEEEEEeeCC-EEEECHHhcCCCCC----CCccEEEEEeeecccccCCCceeEEeEEEE
Confidence 4677888642 2367999999998 99999999964211 11344554431 123445555
Q ss_pred EecCC-------CCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccC
Q 012318 205 NADFH-------SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD 267 (466)
Q Consensus 205 ~~d~~-------~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~ 267 (466)
..++. +|||||+|+.+. .+.++.|.... .+..|+.+.+.||.... ...+....+..+....|.
T Consensus 79 ~~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~ 158 (235)
T 4dgj_A 79 VINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQ 158 (235)
T ss_dssp EECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHH
T ss_pred EECCCCCCCCCCCeEEEEEECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhh
Confidence 55553 699999999753 34566675433 35679999999997432 223444444433333221
Q ss_pred CCCC--CccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHH
Q 012318 268 LGLG--GMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQF 330 (466)
Q Consensus 268 ~~~~--~~~~~~i~~~-----~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l 330 (466)
..+. ......+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+...++|+++.
T Consensus 159 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~ 233 (235)
T 4dgj_A 159 QQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQSF 233 (235)
T ss_dssp HHCTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHTT
T ss_pred hhccCccCCCCeEeecCCCCCCccCCCCCCCeEEEEECCcEEEEEEEEEcCCCCCCCCCEEEeeHHHHHHHHHHH
Confidence 1110 1122344442 357999999999943 34 4999999975422 2245667778888888754
No 104
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.34 E-value=4e-11 Score=109.61 Aligned_cols=160 Identities=22% Similarity=0.222 Sum_probs=105.6
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCC--eEEeccccccCCCCCCCCCCceEEEEeCCCcEEE-----EEEEEec
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADG--TILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFE-----GTVLNAD 207 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G--~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~-----a~vv~~d 207 (466)
..+||.|...+ ...|+|++|..+| +||||+||+.+.. .......+++.++ ..+...|
T Consensus 15 P~svv~l~~~d--------~h~G~g~~V~~~G~~~LlTA~Hv~~~~~--------~~~~~~k~g~~ip~~~~~~~~~~~d 78 (191)
T 1zyo_A 15 PASLVAIKSGP--------TTIGFGCRTKIDGEDCLLTAHHVWCNSM--------RPTGLAKAGKQVSVEDWEISMSSSD 78 (191)
T ss_dssp CSSEEEEEETT--------EEEEEEEEEEC--CEEEEECHHHHTSSS--------CCCEEEETTEEEECCSCEEEEEECC
T ss_pred CCeEEEEEeCC--------eEEEEEEEEEECCCcEEEEChhhCcCCc--------ceeeecCCCCEEEcccceeeEccCC
Confidence 34688887633 3679999997655 9999999997631 1112233444433 3344457
Q ss_pred CCCCEEEEEeCCC----CCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEccc
Q 012318 208 FHSDIAIVKINSK----TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCA 283 (466)
Q Consensus 208 ~~~DlAlLkv~~~----~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~ 283 (466)
+..|+||++++.. ...+.+.|.. ...++.|.++|++.+.......|+.... . ....+++.+.
T Consensus 79 ~~~D~all~vp~~~~s~lg~~~a~~~~---~~~~~~vt~yg~~~~~~~~s~~g~~~~~-~----------~~~~~~~~~~ 144 (191)
T 1zyo_A 79 KMLDFAIVRVPTHVWSKLGVKSTPLVC---PSSKDVITCYGGSSSDCLMSGVGSSSTS-E----------FTWKLTHTCP 144 (191)
T ss_dssp TTTCEEEEECCHHHHHHHTCCCCCBCC---CCSCEEEEEEEESSTTSEEEEEEEEEEC-S----------STTEEEECCC
T ss_pred CCCcEEEEEcCCChhhhcCcceeEeec---CCCCccEEEEeecCCCCEeecccceeec-c----------CCcEEEEEcC
Confidence 7899999999853 2345555532 3358999999998754433333322111 1 0236889999
Q ss_pred CCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHH
Q 012318 284 INAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKI 326 (466)
Q Consensus 284 i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~ 326 (466)
+.+|.||+|+||. ..||||+..... ....+.++-+..++.+
T Consensus 145 T~~G~SGsP~~ng-~~IVGvh~G~~~-~~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 145 TAAGWSGTPLYSS-RGVVGMHVGFEE-IGKLNRGVNMFYVANY 185 (191)
T ss_dssp CCTTCTTCEEECS-SCEEEEEEEEEE-TTTEEEEECHHHHHHH
T ss_pred CCCCCCCCcEEcC-CeEEEEEeCccc-CCceeeeeehHHHhhh
Confidence 9999999999986 488899988643 3557788887777665
No 105
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.34 E-value=2e-11 Score=122.66 Aligned_cols=190 Identities=12% Similarity=0.093 Sum_probs=118.4
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCC---CCCceEEEEeCCCcEEEEEEEEecC---
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRA---LPKGKVDVTLQDGRTFEGTVLNADF--- 208 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~---~~~~~i~V~~~~g~~~~a~vv~~d~--- 208 (466)
.|-.|.|... ....|.|.+|+++ ||||||||+........ .......+.....+.+..+-+..|+
T Consensus 114 ~Pw~v~l~~~--------~~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~HP~y~ 184 (347)
T 4f4o_C 114 FPWQAKMISH--------HNLTSGATLINEQ-WLLTTAKNLRLGHKNDTKAKDIAPTLRLYVGKKQEVEIEKVIFHPDNS 184 (347)
T ss_dssp CTTCEEEECT--------TCCEEECCBCSSS-EEEECHHHHTTTSCTTCCHHHHGGGCEEEETTTEEECEEEEEECSCTT
T ss_pred CCcEEEEEeC--------CCEEEEEEEEcCC-EEEeCcccccCCCCCcceEEeeeeeeeecCCCeEEEEEEEEEECcCCC
Confidence 4556777532 2367999999988 99999999964321110 0112234444555666666666776
Q ss_pred CCCEEEEEeCCC----CCCCccccCCCCCCCCCCEEEEEecCCCCC----CceEEeEEeeeecCccC-------------
Q 012318 209 HSDIAIVKINSK----TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQ----NTVTAGIVSCVDRKSSD------------- 267 (466)
Q Consensus 209 ~~DlAlLkv~~~----~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~~~~~~------------- 267 (466)
.+|||||+|+.+ ..+.|+.|........|..+++.||..... ..+....+.-+....+.
T Consensus 185 ~nDIALlkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~ 264 (347)
T 4f4o_C 185 TVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTVPEKKT 264 (347)
T ss_dssp TCCCEEEEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSSGGGCC
T ss_pred CCCEEEEEECCCccCCCceeeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhcccccccccc
Confidence 469999999975 345677776666678899999999975422 23334444333322111
Q ss_pred ----CCCCC-ccccEEEE-----cccCCCCCccceeec---CCC--eEEEEEEeEecCC-CeeeEEEeHHHHHHHHHHHH
Q 012318 268 ----LGLGG-MRREYLQT-----DCAINAGNSGGPLVN---IDG--EIVGINIMKVAAA-DGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 268 ----~~~~~-~~~~~i~~-----~~~i~~G~SGGPlvd---~~G--~VVGI~~~~~~~~-~g~~~aip~~~i~~~l~~l~ 331 (466)
.+... ....++.. ....|.|+|||||+- .+| .++||++++..-. ...+.+.-+....+|+++.+
T Consensus 265 ~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C~~~~pgVYTrVs~y~~WI~~~i 344 (347)
T 4f4o_C 265 PKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKSCRTAEYGVYVRVTSILDWIQTTI 344 (347)
T ss_dssp CCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCCTTTSSCEEEEEHHHHHHHHHHHH
T ss_pred ccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 00000 11223433 235789999999972 234 3899999975422 22466788999999999876
Q ss_pred Hc
Q 012318 332 KN 333 (466)
Q Consensus 332 ~~ 333 (466)
++
T Consensus 345 ~~ 346 (347)
T 4f4o_C 345 AD 346 (347)
T ss_dssp TC
T ss_pred Hc
Confidence 53
No 106
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.34 E-value=2e-11 Score=114.67 Aligned_cols=178 Identities=19% Similarity=0.234 Sum_probs=101.3
Q ss_pred CCceEEEEccccccccccCCceeEEEEEe---CCCeEEeccccccCCCCCCCCCCceEEEEeC--CC----cEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVD---ADGTILTCAHVVVDFHGSRALPKGKVDVTLQ--DG----RTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~---~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~--~g----~~~~a~vv~ 205 (466)
.|.+++|..... .+...|+|.+|+ ++ +|||||||+.+..... ....+.+... +. ..+..+-+.
T Consensus 6 ~p~~g~l~~~~~-----~~~~~CgGslI~s~s~~-~VLTAAHC~~~~~~~~--~~~~~~v~~G~~~~~~~~~~~~v~~~~ 77 (218)
T 3cp7_A 6 SPHIGKVFFSTN-----QGDFVCSANIVASANQS-TVATAGHCLHDGNGGQ--FARNFVFAPAYDYGESEHGVWAAEELV 77 (218)
T ss_dssp CTTEEEEEEEET-----TEEEEEEEEEBCCTTSC-EEEECGGGTBCCTTCB--BCEEEEEEETCSSSCCTTCCEEEEEEE
T ss_pred CceEEEEEEEcC-----CCCeEEEEEEEecCCCC-EEEEChHhcCcCCCCe--eecCEEEECcccCCCCCccEEEEEEEE
Confidence 567888875321 123679999999 87 9999999996521000 0123444432 11 134444343
Q ss_pred ec--------CCCCEEEEEeCCC--CC----CC-ccccCCCCCCCCCCEEEEEecCCCCC---Cce-EEeEEeeeecCcc
Q 012318 206 AD--------FHSDIAIVKINSK--TP----LP-AAKLGTSSKLCPGDWVVAMGCPHSLQ---NTV-TAGIVSCVDRKSS 266 (466)
Q Consensus 206 ~d--------~~~DlAlLkv~~~--~~----~~-~~~l~~s~~~~~G~~V~~iG~p~~~~---~~~-t~G~Vs~~~~~~~ 266 (466)
.| ..+|||||+|+.+ .. +. ++.+... ...|+.+.+.||+.... ... .+.... ...
T Consensus 78 ~hp~y~~~~~~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~--~~~g~~~~v~GwG~~~~~~~~~l~~C~~~~-~~~--- 151 (218)
T 3cp7_A 78 TSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFN--QPRGQYYSAYGYPAAAPFNGQELHSCHGTA-TND--- 151 (218)
T ss_dssp ECHHHHHHCCGGGCCEEEEECCBTTBCHHHHHSCCBCBCCS--CCSSCEEEEEECCCSTTCCSSSCEEEEEEC-EEC---
T ss_pred ECcccccCCCCcCCEEEEEEeCCCCcChhHhcCcccceeec--CCCCCEEEEEeCCCCCCCCCceeeEeeeeE-EcC---
Confidence 32 3579999999976 21 22 4555432 24789999999997432 111 111000 000
Q ss_pred CCCCCCccccEEEEcccCCCCCccceeecC---CCeEEEEEEeEecCCCeeeEEEe-HHHHHHHHHHHH
Q 012318 267 DLGLGGMRREYLQTDCAINAGNSGGPLVNI---DGEIVGINIMKVAAADGLSFAVP-IDSAAKIIEQFK 331 (466)
Q Consensus 267 ~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~---~G~VVGI~~~~~~~~~g~~~aip-~~~i~~~l~~l~ 331 (466)
. .. ...+.+.|..+.|+|||||+.. .++++||++++........|... -+.++.++++..
T Consensus 152 ~--~~---~~~~~~~Ca~~~GDSGGPlv~~~~g~~~lvGIvS~G~gc~~~~~~~p~~~~~~~~l~~~a~ 215 (218)
T 3cp7_A 152 P--MG---SSTQGIPCNMTGGSSGGPWFLGNGTGGAQNSTNSYGYTFLPNVMFGPYFGSGAQQNYNYAS 215 (218)
T ss_dssp T--TS---SSCEEEECCCCTTCTTCEEEESSSSSSCEEEECCEEETTEEEEEEECCCCHHHHHHHHHHT
T ss_pred C--CC---CceEEecCCCCCCCcCCeeEEccCCCeEEEEEEccccCCCCCcEEcCcCCHHHHHHHHHHH
Confidence 0 00 1112233456789999999954 27999999998654444444432 355677766643
No 107
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.33 E-value=4.8e-11 Score=113.18 Aligned_cols=187 Identities=14% Similarity=0.125 Sum_probs=113.1
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-------C--cEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------G--RTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-------g--~~~~a~vv~ 205 (466)
.|-.|.|...... + ....|+|.+|+++ +|||+|||+.+... .....+.|.+.. + +.+..+-+.
T Consensus 12 ~Pw~v~l~~~~~~-~---~~~~CgGtLIs~~-~VLTAAHC~~~~~~---~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 83 (237)
T 2f91_A 12 FPYQLSFQETFIG-F---SFHFCGASIYNEN-YAITAGHCVYGDDY---ENPSGLQIVAGELDMSVNEGSEQIITVSKII 83 (237)
T ss_dssp STTEEEEEEEETT-E---EEEEEEEEEEETT-EEEECGGGTTTSCT---TSCCSEEEEESCSBTTSCCSCCEEEEEEEEE
T ss_pred CCcEEEEEEecCC-C---CcceEEEEEeeCC-EEEEcHHhCCCCcc---CCcccEEEEECCeeccCCCCccEEEEEEEEE
Confidence 4667777643111 0 0124999999988 99999999975310 012345565531 2 445555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC-----CCceEEeEEeeeecCccC--
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD-- 267 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~-- 267 (466)
.|+ .+|||||+|+.+. .+.|+.|... ....++.+++.||.... ...+....+.-+....|.
T Consensus 84 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 162 (237)
T 2f91_A 84 LHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQ-GHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRAD 162 (237)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCT-TCCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHHH
T ss_pred ECCCCCCCCCCCcEEEEEECCCcccCCceeeccCCCC-CCCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhhh
Confidence 554 4699999999763 3566777553 34678999999997542 123444444333332221
Q ss_pred CCCCCccccEEEE-----cccCCCCCccceeecCCC---eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHH
Q 012318 268 LGLGGMRREYLQT-----DCAINAGNSGGPLVNIDG---EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQF 330 (466)
Q Consensus 268 ~~~~~~~~~~i~~-----~~~i~~G~SGGPlvd~~G---~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l 330 (466)
+.........+.. ....|.|+|||||+-.++ .++||++++..-. ..-+.+.-+...++|+++.
T Consensus 163 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 235 (237)
T 2f91_A 163 YGADEILDSMICAGVPEGGKDSCQGDSGGPLAASDTGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKAN 235 (237)
T ss_dssp HCTTTSCTTEEEECCTTCCCBCCTTCTTCEEEECTTSSCEEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHHH
T ss_pred hCCCCcCCCeEEEecCCCCCCCCCCcCCCCeEEecCCCEEEEEEEEecCCCCCCCCCcEEEEHHHhHHHHHHh
Confidence 1111112234444 245799999999995432 8999999975422 1235567777788888763
No 108
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.33 E-value=2.2e-11 Score=116.03 Aligned_cols=188 Identities=18% Similarity=0.200 Sum_probs=114.0
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC------CcEEEEEEEEecC
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------GRTFEGTVLNADF 208 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~------g~~~~a~vv~~d~ 208 (466)
.|-.|.|...... ....|+|.+|+++ +|||+|||+..... ....+.|.+.. ++.+..+-+..|+
T Consensus 12 ~Pw~v~l~~~~~~-----~~~~CgGtLIs~~-~VLTAAHC~~~~~~----~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp 81 (245)
T 2f9n_A 12 WPWQVSLRVRDRY-----WMHFCGGSLIHPQ-WVLTAAHCVGPDVK----DLATLRVQLREQHLYYQDQLLPVSRIIVHP 81 (245)
T ss_dssp CTTEEEEEEESSS-----EEEEEEEEEEETT-EEEECGGGGCSSCC----CGGGEEEECSCSBTTTTCCCBCEEEEEECT
T ss_pred CCcEEEEEEcCCC-----cceEEEEEEeeCC-EEEECHHhCCCCCC----CcceEEEEeCCcccccCceEEEEEEEEECC
Confidence 4678888653211 1367999999988 99999999964211 11346665532 2344455555554
Q ss_pred -------CCCEEEEEeCCCC----CCCccccCCC-CCCCCCCEEEEEecCCCCC-------CceEEeEEeeeecCccCC-
Q 012318 209 -------HSDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSLQ-------NTVTAGIVSCVDRKSSDL- 268 (466)
Q Consensus 209 -------~~DlAlLkv~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~~-------~~~t~G~Vs~~~~~~~~~- 268 (466)
.+|||||+|+.+. .+.++.|... ..+..|+.++++||..... ..+....+.-+....|..
T Consensus 82 ~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 161 (245)
T 2f9n_A 82 QFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAK 161 (245)
T ss_dssp TCCSSCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHH
T ss_pred CccCCCCCCcEEEEEeCCCCcCCCCccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhh
Confidence 4699999999763 3556666543 2456799999999975321 123333332222222210
Q ss_pred -CC--------CCccccEEEE---cccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHH
Q 012318 269 -GL--------GGMRREYLQT---DCAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 269 -~~--------~~~~~~~i~~---~~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~ 331 (466)
.. .......+.. ....|.|+|||||+-. +| .++||++++..-. ..-+.+.-+....+|+++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 241 (245)
T 2f9n_A 162 YHLGAYTGDDVRIIRDDMLCAGNSQRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYV 241 (245)
T ss_dssp HHTTCCSCTTSCCSCTTEEEECCSSSBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHS
T ss_pred hcccccccccccccccccEeecCCCCCcCCCCCCCceEEEECCEEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 00 0111233443 2457999999999943 46 6899999975321 22456788888888888765
Q ss_pred H
Q 012318 332 K 332 (466)
Q Consensus 332 ~ 332 (466)
+
T Consensus 242 ~ 242 (245)
T 2f9n_A 242 P 242 (245)
T ss_dssp C
T ss_pred h
Confidence 4
No 109
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.33 E-value=4.8e-11 Score=116.34 Aligned_cols=185 Identities=17% Similarity=0.201 Sum_probs=115.4
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|..|.|... ...|+|.+|+++ ||||+|||+.+... ...+.|.+.. .+.+..+-+.
T Consensus 47 ~Pw~v~l~~~---------~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~V~~G~~~~~~~~~~~~~~~v~~i~ 111 (283)
T 1yc0_A 47 HPWLAAIYIG---------DSFCAGSLVHTC-WVVSAAHCFSHSPP-----RDSVSVVLGQHFFNRTTDVTQTFGIEKYI 111 (283)
T ss_dssp STTEEEEEET---------TEEEEEEEEETT-EEEECGGGGTTCCC-----GGGEEEEESCCBTTCCCSSCEEECEEEEE
T ss_pred CCeEEEEEcC---------CcEEEEEEeeCC-EEEECHHHcCCCCC-----CceEEEEEeeeecccCCCceEEEeeEEEE
Confidence 4777888532 257999999988 99999999975311 1346666532 2334444444
Q ss_pred ecC--------CCCEEEEEeCCC--------CCCCccccCCC-CCCCCCCEEEEEecCCCC------CCceEEeEEeeee
Q 012318 206 ADF--------HSDIAIVKINSK--------TPLPAAKLGTS-SKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVD 262 (466)
Q Consensus 206 ~d~--------~~DlAlLkv~~~--------~~~~~~~l~~s-~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~ 262 (466)
.++ .+|||||+|+.+ ..+.++.|... ..+..|+.+++.||.... ...+....+.-+.
T Consensus 112 ~hp~y~~~~~~~~DIALl~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~ 191 (283)
T 1yc0_A 112 PYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVA 191 (283)
T ss_dssp ECTTCCTTSTTTTCCEEEEECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCC
T ss_pred ecCccccCCCCCCceEEEEeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEEC
Confidence 332 469999999865 23456666542 345679999999997532 2334455554444
Q ss_pred cCccCC--CCCC-ccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHH
Q 012318 263 RKSSDL--GLGG-MRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQ 329 (466)
Q Consensus 263 ~~~~~~--~~~~-~~~~~i~~~-----~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~ 329 (466)
...|.. .++. .....+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+....+|+++
T Consensus 192 ~~~C~~~~~~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~ 271 (283)
T 1yc0_A 192 DHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWIND 271 (283)
T ss_dssp HHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHH
T ss_pred HHHhcCccccCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEECCcEEEEEEEEECCCCCCCCCCeEEEEhhhHHHHHHH
Confidence 333321 1111 112345442 357999999999944 35 5999999975421 234667888888899888
Q ss_pred HHHcC
Q 012318 330 FKKNG 334 (466)
Q Consensus 330 l~~~g 334 (466)
.++..
T Consensus 272 ~i~~~ 276 (283)
T 1yc0_A 272 RIRPP 276 (283)
T ss_dssp HCC--
T ss_pred HhcCC
Confidence 66543
No 110
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.32 E-value=8.3e-12 Score=118.61 Aligned_cols=176 Identities=17% Similarity=0.175 Sum_probs=105.5
Q ss_pred ceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCC--------cEEEEEEEEecC----------CCCEEEEE
Q 012318 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG--------RTFEGTVLNADF----------HSDIAIVK 216 (466)
Q Consensus 155 ~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g--------~~~~a~vv~~d~----------~~DlAlLk 216 (466)
..|+|.+|+++ +|||+|||+...... ......+.|.+... ..+..+-+..|+ .+|||||+
T Consensus 22 ~~CgGtLIs~~-~VLTAAHC~~~~~~~-~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~ 99 (242)
T 2qy0_B 22 GRGGGALLGDR-WILTAAHTLYPKEHE-AQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLE 99 (242)
T ss_dssp SEEEEEEETTT-EEEECHHHHSCSSCC-C----CCEEEESCSBHHHHHHHCCCCEEEEEECTTCCTTCSSCCTTCCEEEE
T ss_pred CCEEEEEEeCC-EEEEcHHhccccccc-cCCCceEEEEEeeccccccccccceeEEEEEECCCCccCcCCCCCCcEEEEE
Confidence 45999999988 999999999642111 01113445555431 123344444443 34999999
Q ss_pred eCCCC----CCCccccCCCCC-CCCCCEEEEEecCCCCC---CceEEeEEeeeecCccCCC------CCCccccEEEE--
Q 012318 217 INSKT----PLPAAKLGTSSK-LCPGDWVVAMGCPHSLQ---NTVTAGIVSCVDRKSSDLG------LGGMRREYLQT-- 280 (466)
Q Consensus 217 v~~~~----~~~~~~l~~s~~-~~~G~~V~~iG~p~~~~---~~~t~G~Vs~~~~~~~~~~------~~~~~~~~i~~-- 280 (466)
|+.+. .+.|+.|..... +..|..+++.||..... ..+....+.-+....|... ........+..
T Consensus 100 L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~ 179 (242)
T 2qy0_B 100 LENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGH 179 (242)
T ss_dssp ESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESC
T ss_pred ECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhccccccccCCCCEEeccC
Confidence 99763 345666654332 46789999999976432 2344444433332222100 00111234444
Q ss_pred ---cccCCCCCccceeecCC---C--eEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHH
Q 012318 281 ---DCAINAGNSGGPLVNID---G--EIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 281 ---~~~i~~G~SGGPlvd~~---G--~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~ 332 (466)
....|.|+|||||+-.+ | .++||++++..-..+.+.+.-+....+|+++.++
T Consensus 180 ~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~vyt~V~~y~~WI~~~~~ 239 (242)
T 2qy0_B 180 PSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEME 239 (242)
T ss_dssp TTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSSSCEEEEEGGGGHHHHHHHTT
T ss_pred CCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCCCCcEEEEHHHHHHHHHHHhh
Confidence 23579999999999532 2 5999999976433335677888888999887654
No 111
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.31 E-value=3.3e-11 Score=115.45 Aligned_cols=186 Identities=14% Similarity=0.163 Sum_probs=116.1
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|... +...|+|.+|+++ ||||+|||+.+... ...+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 77 (254)
T 2bz6_H 12 CPWQVLLLVN--------GAQLCGGTLINTI-WVVSAAHCFDKIKN-----WRNLIAVLGEHDLSEHDGDEQSRRVAQVI 77 (254)
T ss_dssp STTEEEEEET--------TEEEEEEEECSSS-EEEECGGGGTTCSC-----GGGEEEEESCCBTTCCCSCCEEEEEEEEE
T ss_pred cCCEEEEEeC--------CCcEEEEEEecCC-EEEECHHHcCCCCC-----cceEEEEECCcccCCCCCCcEEEEEEEEE
Confidence 4677888621 2367999999988 99999999976421 1245665532 2345555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCC----CCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCc
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS----KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKS 265 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~----~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~ 265 (466)
.|+ .+|||||+|+.+. .+.++.|.... .+..++.+++.||..... ..+....+..+....
T Consensus 78 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~ 157 (254)
T 2bz6_H 78 IPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQD 157 (254)
T ss_dssp EETTCCTTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHH
T ss_pred ECCCCCCCCCcCcEEEEEECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHH
Confidence 554 4699999999763 34556664321 234688999999975322 233344443333222
Q ss_pred cC--CCC----CCccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHH
Q 012318 266 SD--LGL----GGMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQ 329 (466)
Q Consensus 266 ~~--~~~----~~~~~~~i~~~-----~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~ 329 (466)
|. +.. .......+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+....+|+++
T Consensus 158 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 237 (254)
T 2bz6_H 158 CLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQK 237 (254)
T ss_dssp HHHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHH
T ss_pred HhhhhhccccCCccCCCEEeecCCCCCCccccccCCCceEEeECCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 21 100 01122345442 357999999999953 35 5999999975422 234567888899999999
Q ss_pred HHHcC
Q 012318 330 FKKNG 334 (466)
Q Consensus 330 l~~~g 334 (466)
.++..
T Consensus 238 ~~~~~ 242 (254)
T 2bz6_H 238 LMRSE 242 (254)
T ss_dssp HHTSC
T ss_pred HHhcc
Confidence 88765
No 112
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.31 E-value=1.2e-11 Score=117.39 Aligned_cols=186 Identities=18% Similarity=0.203 Sum_probs=111.4
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC--CCcE---------EEEE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ--DGRT---------FEGT 202 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~--~g~~---------~~a~ 202 (466)
-.|-.|.|...... .....|+|.+|+++ +|||+|||+.+. ..+.|.+. +-.. +..+
T Consensus 9 ~~Pw~v~l~~~~~~----~~~~~CgGtLIs~~-~VLTAAhC~~~~--------~~~~v~~G~~~~~~~~~~~~~~~~~v~ 75 (240)
T 1fon_A 9 SWSWQVSLQYEKDG----AFHHTCGGSLIAPD-WVVTAGHCISTS--------RTYQVVLGEYDRSVLEGSEQVIPINAG 75 (240)
T ss_dssp CEEEEEEEEEEETT----EEEEEECCEEEETT-EEEECGGGCCTT--------SCEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CcccEEEEEEecCC----cEeeEEEEEEeeCC-EEEECHHHCCCC--------CceEEEeeeeeccccCCCceeEeeeee
Confidence 34677888653211 11367999999988 999999999763 23444432 1111 1111
Q ss_pred EEEecC-------C--CCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEeEEeeeec
Q 012318 203 VLNADF-------H--SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDR 263 (466)
Q Consensus 203 vv~~d~-------~--~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~ 263 (466)
-+..|+ . +|||||+|+.+. .+.++.|.... .+..|+.+++.||.... ...+....+..+..
T Consensus 76 ~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~ 155 (240)
T 1fon_A 76 DLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDY 155 (240)
T ss_dssp SEEECTTCCTTCGGGCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECH
T ss_pred EEEECCCCcCCCccCCCCEEEEEecCccccCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCH
Confidence 122333 2 899999999763 35666665432 35678999999997542 12333333333333
Q ss_pred CccCCC--CCC-ccccEEEEc---ccCCCCCccceeecC--CC--eEEEEEEeEec-C---CCeeeEEEeHHHHHHHHHH
Q 012318 264 KSSDLG--LGG-MRREYLQTD---CAINAGNSGGPLVNI--DG--EIVGINIMKVA-A---ADGLSFAVPIDSAAKIIEQ 329 (466)
Q Consensus 264 ~~~~~~--~~~-~~~~~i~~~---~~i~~G~SGGPlvd~--~G--~VVGI~~~~~~-~---~~g~~~aip~~~i~~~l~~ 329 (466)
..|... ++. .....+... ...|.|+|||||+-. +| .++||++++.. . ...-+.+.-+....+|+++
T Consensus 156 ~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~ 235 (240)
T 1fon_A 156 EHCSQWDWWGITVKKTMVCAGGDTRSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDE 235 (240)
T ss_dssp HHHTSTTTTGGGCCTTEEEECCSSSCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHH
T ss_pred HHhccceecCCccccceEeecCCCCcccCCCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHH
Confidence 222211 111 112344432 457999999999942 56 89999999752 1 1234567888888888888
Q ss_pred HHH
Q 012318 330 FKK 332 (466)
Q Consensus 330 l~~ 332 (466)
.++
T Consensus 236 ~~~ 238 (240)
T 1fon_A 236 TIA 238 (240)
T ss_dssp HHH
T ss_pred HHh
Confidence 664
No 113
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.31 E-value=1.4e-10 Score=113.65 Aligned_cols=191 Identities=17% Similarity=0.091 Sum_probs=114.6
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC--------------CcEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD--------------GRTFE 200 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~--------------g~~~~ 200 (466)
.|-.|.|.......+ .....|.|.+|+++ ||||+|||+..... ...+.|.+.. .+.+.
T Consensus 12 ~Pw~v~l~~~~~~~~--~~~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~~~~~~ 83 (290)
T 1fiw_A 12 WPWMVSLQIFTYHNN--RRYHVCGGSLLNSQ-WLLTAAHCFRIKKK-----VTDWRLIFGAKEVEWGTNKPVKPPLQERY 83 (290)
T ss_dssp STTEEEEEEEETTTT--EEEEEEEEEEEETT-EEEECGGGGSSCCS-----GGGEEEEESCSBCCTTCCSCCCTTCEEEE
T ss_pred CCcEEEEEEeccCCC--ccceEEEEEEeeCC-EEEECHHhCCCCCC-----CcceEEEecceEEeccCCCcCCCCceEEE
Confidence 467788764321110 12357999999988 99999999975311 1234454321 23444
Q ss_pred EEEEEecC-------CCCEEEEEeCCCC----CCCccccCCCC--CCCCCCEEEEEecCCCC------CCceEEeEEeee
Q 012318 201 GTVLNADF-------HSDIAIVKINSKT----PLPAAKLGTSS--KLCPGDWVVAMGCPHSL------QNTVTAGIVSCV 261 (466)
Q Consensus 201 a~vv~~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~--~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~ 261 (466)
.+-+..|+ .+|||||+|+.+. .+.++.|.... ....|+.+++.||.... ...+....+..+
T Consensus 84 V~~i~~Hp~y~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~ 163 (290)
T 1fiw_A 84 VEKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLI 163 (290)
T ss_dssp EEEEEECTTCBTTTTBTCCEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEE
T ss_pred EEEEEECCCCCCCCCCCCEEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEe
Confidence 55455554 4699999999763 34566665422 23468999999997532 123444455444
Q ss_pred ecCccCCC--CC-CccccEEEEc-----ccCCCCCccceeecCC---C--eEEEEEEeEecCC--CeeeEEEeHHHHHHH
Q 012318 262 DRKSSDLG--LG-GMRREYLQTD-----CAINAGNSGGPLVNID---G--EIVGINIMKVAAA--DGLSFAVPIDSAAKI 326 (466)
Q Consensus 262 ~~~~~~~~--~~-~~~~~~i~~~-----~~i~~G~SGGPlvd~~---G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~ 326 (466)
....|... +. ......+... ...|.|+|||||+-.+ | .++||++++..-. ..-+.+.-+....+|
T Consensus 164 ~~~~C~~~~~~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~W 243 (290)
T 1fiw_A 164 DLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNW 243 (290)
T ss_dssp CHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGHHH
T ss_pred cHHHhccccccCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHH
Confidence 43333211 11 1122344442 3679999999999432 3 6999999975321 223556777888888
Q ss_pred HHHHHHc
Q 012318 327 IEQFKKN 333 (466)
Q Consensus 327 l~~l~~~ 333 (466)
+++.++.
T Consensus 244 I~~~~~~ 250 (290)
T 1fiw_A 244 IASKIGS 250 (290)
T ss_dssp HHHHHCH
T ss_pred HHHHhCc
Confidence 8887654
No 114
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.31 E-value=1.9e-12 Score=104.51 Aligned_cols=71 Identities=21% Similarity=0.368 Sum_probs=64.9
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhcC-CCCeEEEEEEECCCeEEEEEEEecCCC
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDR-VGEPLKVVVQRANDQLVTLTVIPEEAN 463 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~-~g~~v~l~v~R~~g~~~~l~v~~~~~~ 463 (466)
.|++|..|.++|||++ ||++||+|++|||+++.+++++..++... +|++++|+|.| +|+.+++++++.+.+
T Consensus 1 ~Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~~~~~~ 72 (91)
T 2kjp_A 1 NGIYASSVVENMPAKG-KIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIER-EEKEKRVTLTLKQFP 72 (91)
T ss_dssp CCSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEES-SSCEECCCEECCCCT
T ss_pred CceEEEEECCCChHHH-cCCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEE-CCEEEEEEEEEeccC
Confidence 3788999999999999 99999999999999999999999999874 79999999999 899999999887654
No 115
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.31 E-value=9.7e-11 Score=118.83 Aligned_cols=187 Identities=19% Similarity=0.210 Sum_probs=116.5
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-------CcEEEEEEEEec
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GRTFEGTVLNAD 207 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-------g~~~~a~vv~~d 207 (466)
.|-.|.|... +...|.|.+|+++ ||||+|||+..... ....+.|.+.. +..+..+-+..|
T Consensus 129 ~Pw~v~l~~~--------~~~~CgGsLIs~~-~VLTAAHCv~~~~~----~~~~~~V~~G~~~~~~~~~~~~~V~~i~~H 195 (372)
T 1z8g_A 129 WPWQVSLRYD--------GAHLCGGSLLSGD-WVLTAAHCFPERNR----VLSRWRVFAGAVAQASPHGLQLGVQAVVYH 195 (372)
T ss_dssp STTEEEEEET--------TEEEEEEEESSSS-EEEECGGGCCGGGC----CGGGEEEEESCSBTTCTTSEEECEEEEEEE
T ss_pred CCcEEEEEeC--------CceEEEEEEecCC-EEEEChhhcCCCCC----ccceEEEEEeeEeccCCCCcEEEEEEEEEC
Confidence 4667877641 2367999999988 99999999943110 11345555432 234555545544
Q ss_pred CC-------------CCEEEEEeCCCC----CCCccccCCC-CCCCCCCEEEEEecCCCCC-----CceEEeEEeeeecC
Q 012318 208 FH-------------SDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRK 264 (466)
Q Consensus 208 ~~-------------~DlAlLkv~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~ 264 (466)
+. +|||||+|+.+. .+.|+.|... ..+..|+.+++.||..... ..+....+..+...
T Consensus 196 p~y~~~~~~~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~~ 275 (372)
T 1z8g_A 196 GGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISND 275 (372)
T ss_dssp TTCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHH
T ss_pred CCccccccCCCCCCCccEEEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecChH
Confidence 43 499999999763 3566666543 2456799999999975421 23444444444333
Q ss_pred ccCC--CCC-CccccEEEEc-----ccCCCCCccceeecCC-----C--eEEEEEEeEecCC--CeeeEEEeHHHHHHHH
Q 012318 265 SSDL--GLG-GMRREYLQTD-----CAINAGNSGGPLVNID-----G--EIVGINIMKVAAA--DGLSFAVPIDSAAKII 327 (466)
Q Consensus 265 ~~~~--~~~-~~~~~~i~~~-----~~i~~G~SGGPlvd~~-----G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l 327 (466)
.+.. .++ .....++... ...|.|+|||||+-.+ | .++||++++..-. ..-+.+.-+....+|+
T Consensus 276 ~C~~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~vyt~V~~y~~WI 355 (372)
T 1z8g_A 276 VCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWI 355 (372)
T ss_dssp HHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGGHHHH
T ss_pred HhCcchhcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHH
Confidence 3321 111 1122345442 3579999999999432 3 6999999975321 2345678888899999
Q ss_pred HHHHHcC
Q 012318 328 EQFKKNG 334 (466)
Q Consensus 328 ~~l~~~g 334 (466)
++.++..
T Consensus 356 ~~~i~~~ 362 (372)
T 1z8g_A 356 FQAIKTH 362 (372)
T ss_dssp HHHHHHT
T ss_pred HHHHhcc
Confidence 8877654
No 116
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.30 E-value=1.2e-11 Score=101.70 Aligned_cols=72 Identities=22% Similarity=0.343 Sum_probs=65.2
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEAN 463 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 463 (466)
..|++|.+|.++|||++ ||++||+|++|||++|.+|+++..++.. ..|+.+.|+|.| +|+.+++++++.+.+
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~~~~~~ 78 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKH-GDKNEQADIKLTAID 78 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEE-TTEEEEEEEECEECS
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEE-CCEEEEEEEEEecCC
Confidence 57999999999999996 9999999999999999999999999886 578999999999 899888888876543
No 117
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.30 E-value=2.4e-11 Score=114.98 Aligned_cols=180 Identities=18% Similarity=0.155 Sum_probs=109.2
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|... ....|+|.+|+++ +|||+|||+... ..+.|.+.. .+.+...-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAhC~~~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 74 (235)
T 2wph_S 12 FPWQVVLNGK--------VDAFCGGSIVNEK-WIVTAAHCVETG--------VKITVVAGEHNIEETEHTEQKRNVIRII 74 (235)
T ss_dssp STTEEEEESS--------STTCEEEEEEETT-EEEECGGGCCTT--------SCCEEEESCCBTTSCCSCCEEEEEEEEE
T ss_pred CCeEEEEccC--------CCeeEEEEEEeCC-EEEECHHHCcCC--------CCEEEEEcccccCCCCCCcEEeeeEEEE
Confidence 4667877632 1357999999998 999999999753 234454431 2344444444
Q ss_pred ecC---------CCCEEEEEeCCCC----CCCccccCCCCC---CCCCCEEEEEecCCCCC-----CceEEeEEeeeecC
Q 012318 206 ADF---------HSDIAIVKINSKT----PLPAAKLGTSSK---LCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRK 264 (466)
Q Consensus 206 ~d~---------~~DlAlLkv~~~~----~~~~~~l~~s~~---~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~ 264 (466)
.|+ .+|||||+|+.+. .+.|+.|..... +..+..+++.||..... ..+....+.-+...
T Consensus 75 ~Hp~y~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~ 154 (235)
T 2wph_S 75 PHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRA 154 (235)
T ss_dssp ECTTTTSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHH
T ss_pred eCCCCcccCCcCCCCEEEEEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHH
Confidence 443 3599999999763 244555543211 23578899999975321 23333444333332
Q ss_pred ccCCCCC-CccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHH
Q 012318 265 SSDLGLG-GMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 265 ~~~~~~~-~~~~~~i~~~-----~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~ 331 (466)
.|...+. ......+... ...|.|+|||||+-. +| .++||++++..-. ...+.+..+....+|+++..
T Consensus 155 ~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 232 (235)
T 2wph_S 155 TCLRSTKFTITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKT 232 (235)
T ss_dssp HHHHTCSSCCCTTEEEESCTTCSCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHC
T ss_pred HhcCcccCCCCCCEEEeCCCCCCCccCCCCCCCceEEeECCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHH
Confidence 2211111 1122344442 357999999999943 35 5999999975421 22456788888888888754
No 118
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.29 E-value=4.2e-11 Score=122.40 Aligned_cols=197 Identities=15% Similarity=0.169 Sum_probs=118.3
Q ss_pred HhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-----------CcEEEE
Q 012318 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-----------GRTFEG 201 (466)
Q Consensus 133 ~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-----------g~~~~a 201 (466)
.-.|-.|.|.......+.......|.|.+|+++ ||||+|||+.+... ....+.|.+.. .+.+..
T Consensus 140 ~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~-~VLTAAHCv~~~~~----~~~~~~V~~G~~~~~~~~~~~~~~~~~V 214 (394)
T 2b9l_A 140 GEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPS-VVLTGAHCVNSYQS----NLDAIKIRAGEWDTLTEKERLPYQERKI 214 (394)
T ss_dssp TSSTTEEEEEECC------CCSEEEEEEEEETT-EEEECHHHHGGGTT----CGGGEEEEESCCBTTCCCSSSCCEEEEE
T ss_pred CCCCcEEEEeeccccccccccceEeeEEEEeCC-EEEeccceecCCCC----CcccEEEEeceeeccCCcCCCccEEEEE
Confidence 345778888653321111123467999999988 99999999975321 01345665532 133455
Q ss_pred EEEEecC-------CCCEEEEEeCCC----CCCCccccCCCCCCCCCCEEEEEecCCCC-------CCceEEeEEeeeec
Q 012318 202 TVLNADF-------HSDIAIVKINSK----TPLPAAKLGTSSKLCPGDWVVAMGCPHSL-------QNTVTAGIVSCVDR 263 (466)
Q Consensus 202 ~vv~~d~-------~~DlAlLkv~~~----~~~~~~~l~~s~~~~~G~~V~~iG~p~~~-------~~~~t~G~Vs~~~~ 263 (466)
+-+..|+ .+|||||+|+.+ ..+.++.|........++.+++.||.... ...+....+.-+..
T Consensus 215 ~~ii~Hp~y~~~~~~nDIALL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~v~iv~~ 294 (394)
T 2b9l_A 215 RQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDR 294 (394)
T ss_dssp EEEEECTTCCTTTCTTCCEEEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEEECEECH
T ss_pred EEEEECCCCCCCccccceEEEEecCccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEEEEEECH
Confidence 5555554 369999999975 34567777654444567889999997532 12344444433333
Q ss_pred CccCC-------CCC-CccccEEEE----cccCCCCCccceeecC----CC--eEEEEEEeEecCC--CeeeEEEeHHHH
Q 012318 264 KSSDL-------GLG-GMRREYLQT----DCAINAGNSGGPLVNI----DG--EIVGINIMKVAAA--DGLSFAVPIDSA 323 (466)
Q Consensus 264 ~~~~~-------~~~-~~~~~~i~~----~~~i~~G~SGGPlvd~----~G--~VVGI~~~~~~~~--~g~~~aip~~~i 323 (466)
..+.. +.. .....++.. ....|.|+|||||+-. +| .++||++++..-. ..-+.+.-+...
T Consensus 295 ~~C~~~~~~~~~~~~~~i~~~~iCAg~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~C~~~~~PgVYT~V~~y 374 (394)
T 2b9l_A 295 DKCQADLRNTRLGLKFVLDQTFVCAGGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAHF 374 (394)
T ss_dssp HHHHHHHHTTTTCTTCCCCTTEEEECCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTCCCBSSSCEEEEEGGGG
T ss_pred HHHHHHHhhcccccceecCCCEEEeeCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCCCCCCCCCeEEEEHHHh
Confidence 22210 000 011234443 2467999999999942 23 6899999875321 223566778889
Q ss_pred HHHHHHHHHcC
Q 012318 324 AKIIEQFKKNG 334 (466)
Q Consensus 324 ~~~l~~l~~~g 334 (466)
.+|+++.++..
T Consensus 375 ~~WI~~~i~~~ 385 (394)
T 2b9l_A 375 RNWIDQEMQAK 385 (394)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99998876654
No 119
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.29 E-value=1.1e-11 Score=100.59 Aligned_cols=72 Identities=21% Similarity=0.383 Sum_probs=65.8
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEAN 463 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 463 (466)
..|++|.+|.++|||++ ||++||+|++|||+++.+++++..++.. .+|+.++|+|.| +|+.+++++++.+.+
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~~~~~~ 76 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIR-DRKQHEAELVLKPFP 76 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEE-TTEEEEEEECCCBCS
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEE-CCEEEEEEEEEeeCC
Confidence 56899999999999999 9999999999999999999999998877 479999999999 899999999887554
No 120
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.28 E-value=3e-11 Score=117.93 Aligned_cols=188 Identities=14% Similarity=0.138 Sum_probs=114.6
Q ss_pred HHHhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC------CCcEEEEEEE
Q 012318 131 AARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ------DGRTFEGTVL 204 (466)
Q Consensus 131 ~~~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~------~g~~~~a~vv 204 (466)
-..-.|-.|.|.... +...|+|.+|+++ ||||+|||+.+. ..+.|.+. ..+.+..+-+
T Consensus 60 ~~~~~Pw~v~l~~~~-------~~~~CgGtLI~~~-~VLTAAHC~~~~--------~~~~V~~G~~~~~~~~~~~~v~~i 123 (283)
T 3f1s_B 60 DLQDLPWQVKLTNSE-------GKDFCGGVIIREN-FVLTTAKCSLLH--------RNITVKTYFNRTSQDPLMIKITHV 123 (283)
T ss_dssp ---CCTTEEEEECTT-------SCEEEEEEEEETT-EEEECHHHHTSC--------SSCEEEECTTC-CCCCEEEEEEEE
T ss_pred cccccCCEEEEEecC-------CCeeeccEEecCC-EEEEcHHhcCcc--------CceEEEEeeeeCCCCcEEEEeEEE
Confidence 345678899997422 2367999999988 999999999653 24455553 2345556656
Q ss_pred EecC-------CCCEEEEEeCCCC----CCCccccCCCC----CCCCCCEEEEEecCCCC---CCceEEeEEeeeecCcc
Q 012318 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSS----KLCPGDWVVAMGCPHSL---QNTVTAGIVSCVDRKSS 266 (466)
Q Consensus 205 ~~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~----~~~~G~~V~~iG~p~~~---~~~~t~G~Vs~~~~~~~ 266 (466)
..|+ .+|||||+|+.+. .+.|+.|.... .+..|+.+++.||.... ...+....+..+....+
T Consensus 124 ~~Hp~y~~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C 203 (283)
T 3f1s_B 124 HVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEEC 203 (283)
T ss_dssp EECTTCBTTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHH
T ss_pred EECCCCCCCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHH
Confidence 6655 4699999999753 35566675532 45679999999997621 12233333333322222
Q ss_pred CCCCCC-ccccEEEE--cccCCCCCccceeecC-CCe--EEEEEEeEecCC-CeeeEEEeHHHHHHHHHHHHHcC
Q 012318 267 DLGLGG-MRREYLQT--DCAINAGNSGGPLVNI-DGE--IVGINIMKVAAA-DGLSFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 267 ~~~~~~-~~~~~i~~--~~~i~~G~SGGPlvd~-~G~--VVGI~~~~~~~~-~g~~~aip~~~i~~~l~~l~~~g 334 (466)
...++. ....++.. ....+.|+|||||+-. +|+ ++||++++.-.. ..-+.+.-+....+||++.++..
T Consensus 204 ~~~~~~~~~~~~~Ca~~~~~~~~gDSGgPlv~~~~~~~~l~GIvS~g~c~~~~~p~vyt~V~~y~~WI~~~~~~~ 278 (283)
T 3f1s_B 204 GQVLNVTVTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQPVGGQAHMVLVTKVSRYSLWFKQIMNAH 278 (283)
T ss_dssp HHHHTSCCCTTEEEEECSSCGGGBCTTCEEEEECSSCEEEEEEECCCSGGGCSSEEEEEEGGGGHHHHHHHHTC-
T ss_pred hhhhcCCCCCCeEcccCCCCCCCCCCCCcEEEEECCEEEEEEEEEeCCCCCCCcceEEEEhHHhHHHHHHHhhcc
Confidence 110000 11223332 2234578999999953 465 999998753221 22457788889999999877654
No 121
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.26 E-value=1.3e-11 Score=98.70 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=60.9
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVI 458 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~ 458 (466)
..|+.|..+.++|||+++||++||+|++|||++|.+|+++.+++.. +.|+.++++|.| +|+.++++++
T Consensus 18 ~~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R-~g~~~~~~v~ 86 (87)
T 2i6v_A 18 VLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVER-DGQQHDVYIQ 86 (87)
T ss_dssp EEEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEE-TTEEEEEEEE
T ss_pred EEEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEE-CCEEEEEEEE
Confidence 3588899999999999999999999999999999999999988876 568899999999 8888777765
No 122
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.24 E-value=2.1e-11 Score=106.35 Aligned_cols=97 Identities=16% Similarity=0.235 Sum_probs=70.2
Q ss_pred eeecccccceeec---CCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecC--CHHHHHHH
Q 012318 358 RVVRPWLGLKMLD---LNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEI 432 (466)
Q Consensus 358 ~~~~~~lG~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~ 432 (466)
+..+++||+.+.. .++.. +.+. ......|++|..|.++|||+++||++||+|++|||+++. +++++.++
T Consensus 34 ~~~~~~lG~~i~~g~~~~~~~-~~~~-----~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~ 107 (139)
T 2vz5_A 34 QGENLILGFSIGGGIDQDPSQ-NPFS-----EDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKR 107 (139)
T ss_dssp ETTEEECSEEEEECTTSCGGG-CSSC-----SSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCCcccccEEEEccccCChhh-hhhc-----ccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHH
Confidence 4457899998753 22110 0110 012357999999999999999999999999999999999 58999999
Q ss_pred HhcCCCCeEEEEEEECCCeEEEEEEEecC
Q 012318 433 MGDRVGEPLKVVVQRANDQLVTLTVIPEE 461 (466)
Q Consensus 433 l~~~~g~~v~l~v~R~~g~~~~l~v~~~~ 461 (466)
+....|+.+.|+|.| +|+..++.+....
T Consensus 108 l~~~~g~~v~l~v~R-~g~~~~v~~~~~~ 135 (139)
T 2vz5_A 108 LTKRSEEVVRLLVTR-QSLQKAVQQSMLS 135 (139)
T ss_dssp HCCTTCSEEEEEEEE-CC-------CCCC
T ss_pred HHhCCCCEEEEEEEE-CCEEEEEEEeece
Confidence 987788999999999 8888777776654
No 123
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.24 E-value=6.8e-10 Score=107.36 Aligned_cols=192 Identities=20% Similarity=0.206 Sum_probs=113.5
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVL 204 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~---------~g~~~~a~vv 204 (466)
-.|..|.|....... .....|.|.+|+++ ||||||||+.+... ...+.|... .+..+..+.+
T Consensus 34 ~~Pw~v~l~~~~~~~---~~~~~CgGsLIs~~-~VLTAAHCv~~~~~-----~~~~~v~~g~~~~~~~~~~~~~~~v~~i 104 (276)
T 2vnt_A 34 NQPWFAAIYRRHRGG---SVTYVCGGSLMSPC-WVISATHCFIDYPK-----KEDYIVYLGRSRLNSNTQGEMKFEVENL 104 (276)
T ss_dssp GSTTEEEEEEECSSS---CEEEEEEEEEEETT-EEEECGGGTTTCCC-----GGGEEEEESCCBSSSCCTTCEEEEEEEE
T ss_pred CCCcEEEEEEecCCC---cceeEEEEEEeeCC-EEEECcccccCCCC-----CccEEEEeeeeeccCCCCceEEEEEEEE
Confidence 468889887543221 12357999999988 99999999976321 123444432 1234555555
Q ss_pred EecC---------CCCEEEEEeCCC--------CCCCccccCCC-CCCCCCCEEEEEecCCCCC------CceEEeEEee
Q 012318 205 NADF---------HSDIAIVKINSK--------TPLPAAKLGTS-SKLCPGDWVVAMGCPHSLQ------NTVTAGIVSC 260 (466)
Q Consensus 205 ~~d~---------~~DlAlLkv~~~--------~~~~~~~l~~s-~~~~~G~~V~~iG~p~~~~------~~~t~G~Vs~ 260 (466)
..|+ ..|||||+++.. ..+.++.|... ..+..|..+.+.||..... .......+.-
T Consensus 105 ~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~~i 184 (276)
T 2vnt_A 105 ILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKL 184 (276)
T ss_dssp EECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEE
T ss_pred EEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeeeeE
Confidence 5544 359999999753 23445555432 3456789999999875421 1222233332
Q ss_pred eecCccCCCCC---CccccEEEE-----cccCCCCCccceeec-CCC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHH
Q 012318 261 VDRKSSDLGLG---GMRREYLQT-----DCAINAGNSGGPLVN-IDG--EIVGINIMKVAAA--DGLSFAVPIDSAAKII 327 (466)
Q Consensus 261 ~~~~~~~~~~~---~~~~~~i~~-----~~~i~~G~SGGPlvd-~~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l 327 (466)
+....+...+. ......+.. ....|.|+|||||+- .+| .++||++++..-. ..-+.+.-+....+|+
T Consensus 185 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~WI 264 (276)
T 2vnt_A 185 ISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 264 (276)
T ss_dssp ECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHH
T ss_pred ecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHH
Confidence 33222221111 011122222 234799999999993 234 4999999975422 1235567788899999
Q ss_pred HHHHHcC
Q 012318 328 EQFKKNG 334 (466)
Q Consensus 328 ~~l~~~g 334 (466)
++.++..
T Consensus 265 ~~~~~~~ 271 (276)
T 2vnt_A 265 RSHTKEE 271 (276)
T ss_dssp HHHHSCC
T ss_pred HHHhhhh
Confidence 9877543
No 124
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=99.22 E-value=2.7e-11 Score=97.40 Aligned_cols=69 Identities=28% Similarity=0.522 Sum_probs=62.1
Q ss_pred ceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEecC
Q 012318 392 GVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPEE 461 (466)
Q Consensus 392 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~~ 461 (466)
.++|.+|.++|||+++||++||+|++|||+++.+++++..++....|+.+.++|.| +|+.+++.+++..
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R-~g~~~~~~v~~~~ 73 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVRDNPGXSLALEIER-QGSPLSLTLIPES 73 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHHHCTTCCEEEEEEE-TTEEEEEEECCEE
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHhcCCCCeEEEEEEE-CCeEEEEEEEEee
Confidence 46789999999999999999999999999999999999998887778899999999 8888888887643
No 125
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.22 E-value=8.7e-11 Score=116.38 Aligned_cols=182 Identities=14% Similarity=0.148 Sum_probs=111.2
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC------CCcEEEEEEEEec
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ------DGRTFEGTVLNAD 207 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~------~g~~~~a~vv~~d 207 (466)
..|..|.|.... +...++|.+|+++ ||||+|||+... ..+.|.+. .++.+..+-+..|
T Consensus 104 ~~Pw~v~l~~~~-------~~~~CgGtLIs~~-~VLTAAHC~~~~--------~~~~V~~G~~~~~~~~~~~~v~~i~~H 167 (317)
T 3h5c_B 104 DLPWQVKLTNSE-------GKDFCGGVIIREN-FVLTTAKCSLLH--------RNITVKTYFNRTSQDPLMIKITHVHVH 167 (317)
T ss_dssp CCTTEEEEECSS-------SCEEEEEEEEETT-EEEECHHHHHSC--------SSCEEEECTTSCTTSCEEEEEEEEEEC
T ss_pred CCCcEEEEeccC-------CceeeeeEEeeCC-EEEEChHhcCcC--------CceEEEEeeecCCCCcEEEEeeEEEEC
Confidence 468889887422 2367999999988 999999999653 23445543 2345666656665
Q ss_pred C-------CCCEEEEEeCCCC----CCCccccCCCC----CCCCCCEEEEEecCCCC---CCceEEeEEeeeecCccCCC
Q 012318 208 F-------HSDIAIVKINSKT----PLPAAKLGTSS----KLCPGDWVVAMGCPHSL---QNTVTAGIVSCVDRKSSDLG 269 (466)
Q Consensus 208 ~-------~~DlAlLkv~~~~----~~~~~~l~~s~----~~~~G~~V~~iG~p~~~---~~~~t~G~Vs~~~~~~~~~~ 269 (466)
+ .+|||||+|+.+. .+.|+.|.... .+..|+.+++.||.... ...+....+..+....+...
T Consensus 168 p~y~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~ 247 (317)
T 3h5c_B 168 MRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQV 247 (317)
T ss_dssp TTCBTTTTBSCCEEEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHH
T ss_pred CCCCCCCCCCCeEEEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhh
Confidence 5 4699999999753 35566675532 35679999999997521 11222223332222211100
Q ss_pred CC-CccccEEEE--cccCCCCCccceeecC-CCe--EEEEEEeEecCC-CeeeEEEeHHHHHHHHHHHH
Q 012318 270 LG-GMRREYLQT--DCAINAGNSGGPLVNI-DGE--IVGINIMKVAAA-DGLSFAVPIDSAAKIIEQFK 331 (466)
Q Consensus 270 ~~-~~~~~~i~~--~~~i~~G~SGGPlvd~-~G~--VVGI~~~~~~~~-~g~~~aip~~~i~~~l~~l~ 331 (466)
+. .....++.. ....+.|+|||||+-. +|+ ++||++++.-.. ..-+.+.-+....+||++.+
T Consensus 248 ~~~~~~~~~~Ca~~~~~~~~gDsGgPl~~~~~~~~~l~Gi~S~g~~~~~~~p~vyt~V~~y~~WI~~~i 316 (317)
T 3h5c_B 248 LNVTVTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQPVGGQAHMVLVTKVSRYSLWFKQIM 316 (317)
T ss_dssp HTCCCCTTEEEEECSCCCCCCCTTCEEEEEETTEEEEEEEECCCCSSCCTTEEEEEEGGGCHHHHHHHH
T ss_pred hcCcCCCceeECCCCCCCcCCCCCCCEEEecCCEEEEEEEEEECCCCCCCcceEEEEhHHhHHHHHHHh
Confidence 00 011223332 2335689999999953 454 999998753221 22446677888888888754
No 126
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.21 E-value=2.5e-10 Score=113.98 Aligned_cols=180 Identities=16% Similarity=0.131 Sum_probs=108.1
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-------CcEEEE---EE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GRTFEG---TV 203 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-------g~~~~a---~v 203 (466)
-.|..|.|. ...|.|.+|+++ ||||+|||+.+... ..|.+.. ...+.. +-
T Consensus 93 ~~Pw~v~l~-----------~~~CgGsLIs~~-~VLTAAHC~~~~~~--------~~v~~G~~~~~~~~~~~~~v~~v~~ 152 (333)
T 1elv_A 93 NFPWQVFFD-----------NPWAGGALINEY-WVLTAAHVVEGNRE--------PTMYVGSTSVQTSRLAKSKMLTPEH 152 (333)
T ss_dssp GSTTEEEEE-----------TTEEEEEEEETT-EEEECHHHHTTCSS--------CCEECSCSBCC-------CEECEEE
T ss_pred CcCeEEEec-----------CCceeEEEecCC-EEEehhheeCCCCC--------CeEEEeeeecccCccceeeeeccce
Confidence 346677772 136999999988 99999999976321 1222211 112222 33
Q ss_pred EEecC--------------CCCEEEEEeCCCC----CCCccccCCCC---CCCCCCEEEEEecCCCCC----CceEEeEE
Q 012318 204 LNADF--------------HSDIAIVKINSKT----PLPAAKLGTSS---KLCPGDWVVAMGCPHSLQ----NTVTAGIV 258 (466)
Q Consensus 204 v~~d~--------------~~DlAlLkv~~~~----~~~~~~l~~s~---~~~~G~~V~~iG~p~~~~----~~~t~G~V 258 (466)
+..|+ .+|||||+|+.+. .+.|+.|.... .+..|+.+++.||..... ..+....+
T Consensus 153 i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v 232 (333)
T 1elv_A 153 VFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARL 232 (333)
T ss_dssp EEECTTSCCCSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEE
T ss_pred EEECCCCcccccccccCCCcceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEE
Confidence 33332 4699999999763 34566665432 245799999999976422 23444444
Q ss_pred eeeecCccCCCCC----------CccccEEEE----cccCCCCCccceeecC---CC---eEEEEEEeEecCCCeeeEEE
Q 012318 259 SCVDRKSSDLGLG----------GMRREYLQT----DCAINAGNSGGPLVNI---DG---EIVGINIMKVAAADGLSFAV 318 (466)
Q Consensus 259 s~~~~~~~~~~~~----------~~~~~~i~~----~~~i~~G~SGGPlvd~---~G---~VVGI~~~~~~~~~g~~~ai 318 (466)
..+....+...+. .....+|.. ....|.|+|||||+-. +| .++||++++..-.. .+.+.
T Consensus 233 ~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~C~~-~~vyt 311 (333)
T 1elv_A 233 PVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT-YGLYT 311 (333)
T ss_dssp EEECHHHHHTC----------CCCCCTTEEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSSTTS-EEEEE
T ss_pred EEEcHHHhhhhhhcccccccccccCCCCeECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCCCCC-CcEEe
Confidence 3333222211000 111234443 2357999999999943 23 49999999754322 57778
Q ss_pred eHHHHHHHHHHHHHcC
Q 012318 319 PIDSAAKIIEQFKKNG 334 (466)
Q Consensus 319 p~~~i~~~l~~l~~~g 334 (466)
-+....+|+++.++..
T Consensus 312 ~V~~y~~WI~~~~~~~ 327 (333)
T 1elv_A 312 RVKNYVDWIMKTMQEN 327 (333)
T ss_dssp EGGGGHHHHHHHHHHT
T ss_pred EHHHHHHHHHHHHhcc
Confidence 8889999998877654
No 127
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.21 E-value=3.2e-10 Score=116.07 Aligned_cols=183 Identities=19% Similarity=0.185 Sum_probs=113.0
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-------CcEEEEEEEEec
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GRTFEGTVLNAD 207 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-------g~~~~a~vv~~d 207 (466)
.|-.|.|.. ...|.|.+|+++ ||||||||+.+.... ...+.|.+.. .+.+..+-+..|
T Consensus 173 ~Pw~v~l~~----------~~~CgGsLIs~~-~VLTAAHC~~~~~~~----~~~~~V~~G~~~~~~~~~~~~~v~~i~~H 237 (403)
T 1zjk_A 173 FPWQVLILG----------GTTAAGALLYDN-WVLTAAHAVYEQKHD----ASALDIRMGTLKRLSPHYTQAWSEAVFIH 237 (403)
T ss_dssp STTEEEEEE----------SCCEEEEEETTT-EEEECHHHHGGGTTC----STTEEEEESCSBTTCSCCEEEEEEEEEEC
T ss_pred cCCEeEecc----------CCceEEEEecCC-EEEEcHHhCCCCCCC----cceEEEEccccccCCCCceEEeEEEEEEC
Confidence 466777753 145999999988 999999999753111 1345555532 234445544444
Q ss_pred C--------CCCEEEEEeCCCC----CCCccccCCCCC---CCCCCEEEEEecCCCCC----CceEEeEEeeeecCccC-
Q 012318 208 F--------HSDIAIVKINSKT----PLPAAKLGTSSK---LCPGDWVVAMGCPHSLQ----NTVTAGIVSCVDRKSSD- 267 (466)
Q Consensus 208 ~--------~~DlAlLkv~~~~----~~~~~~l~~s~~---~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~~~~~~- 267 (466)
+ .+|||||+|+.+. .+.|+.|..... +..|+.+++.||..... ..+....+.-+....+.
T Consensus 238 p~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~~ 317 (403)
T 1zjk_A 238 EGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTA 317 (403)
T ss_dssp TTCCTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHHH
T ss_pred CCCCCCCCCcccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHhh
Confidence 3 4699999999763 356666654322 56799999999976432 23444444433332221
Q ss_pred -CCC-----CCccccEEEE-----cccCCCCCccceeecC---CC--eEEEEEEeEe-cCC--CeeeEEEeHHHHHHHHH
Q 012318 268 -LGL-----GGMRREYLQT-----DCAINAGNSGGPLVNI---DG--EIVGINIMKV-AAA--DGLSFAVPIDSAAKIIE 328 (466)
Q Consensus 268 -~~~-----~~~~~~~i~~-----~~~i~~G~SGGPlvd~---~G--~VVGI~~~~~-~~~--~g~~~aip~~~i~~~l~ 328 (466)
+.. ......+|.. ....|.|+|||||+-. +| .++||++++. .-. ...+.+.-+....+|++
T Consensus 318 ~~~~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~ 397 (403)
T 1zjk_A 318 AYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIE 397 (403)
T ss_dssp HTTSSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHH
T ss_pred hhhccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHH
Confidence 110 0112234444 2457999999999843 34 5999999983 211 22466788888889888
Q ss_pred HHHH
Q 012318 329 QFKK 332 (466)
Q Consensus 329 ~l~~ 332 (466)
+.++
T Consensus 398 ~~i~ 401 (403)
T 1zjk_A 398 NIIS 401 (403)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 7654
No 128
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.21 E-value=4.6e-11 Score=97.14 Aligned_cols=70 Identities=16% Similarity=0.088 Sum_probs=59.8
Q ss_pred eecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhcC-CCCeEEEEEEECCC-eEEEEEEEecCCC
Q 012318 394 LVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDR-VGEPLKVVVQRAND-QLVTLTVIPEEAN 463 (466)
Q Consensus 394 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~-~g~~v~l~v~R~~g-~~~~l~v~~~~~~ 463 (466)
+|.+|.++|||+++||++||+|++|||++|.+|+++..+|... .++.+.++|.|+++ ...++++++..++
T Consensus 5 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~~~~ 76 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWA 76 (95)
T ss_dssp BEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECTTCC
T ss_pred EEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECCCCceEEEEEEccccc
Confidence 6889999999999999999999999999999999999988764 44789999999432 5677788776653
No 129
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.20 E-value=8.3e-11 Score=117.32 Aligned_cols=176 Identities=16% Similarity=0.172 Sum_probs=103.5
Q ss_pred ceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCC--------cEEEEEEEEecC----------CCCEEEEE
Q 012318 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG--------RTFEGTVLNADF----------HSDIAIVK 216 (466)
Q Consensus 155 ~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g--------~~~~a~vv~~d~----------~~DlAlLk 216 (466)
..|.|.+|+++ ||||||||+...... ......+.|.+..- ..+..+-+..|+ .+|||||+
T Consensus 111 ~~CgGsLIs~~-~VLTAAHCv~~~~~~-~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl~ 188 (329)
T 1md8_A 111 GRGGGALLGDR-WILTAAHTLYPKEHE-AQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLE 188 (329)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC------CCCCEEESCSBHHHHHHHCCCCEEEEEECSSCCSSCTTCCTTCCEEEE
T ss_pred CCcceEEecCC-EEEecCCEEEeCCcc-cCCCceEEEEeccccccccccccceeeEEEEECCCcccccCCCCCccEEEEE
Confidence 35999999988 999999999642110 00112344544321 122333333332 35999999
Q ss_pred eCCCC----CCCccccCCCCC-CCCCCEEEEEecCCCCC---CceEEeEEeeeecCccCC--C----CCCccccEEEE--
Q 012318 217 INSKT----PLPAAKLGTSSK-LCPGDWVVAMGCPHSLQ---NTVTAGIVSCVDRKSSDL--G----LGGMRREYLQT-- 280 (466)
Q Consensus 217 v~~~~----~~~~~~l~~s~~-~~~G~~V~~iG~p~~~~---~~~t~G~Vs~~~~~~~~~--~----~~~~~~~~i~~-- 280 (466)
|+.+. .+.|+.|..... +..|..+++.||..... ..+....+.-+....+.. . .......+|..
T Consensus 189 L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~ 268 (329)
T 1md8_A 189 LENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGH 268 (329)
T ss_dssp ESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESC
T ss_pred ECCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeec
Confidence 99763 345666654332 35789999999975432 233334443332222210 0 00111234443
Q ss_pred ---cccCCCCCccceeecC---CC--eEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHH
Q 012318 281 ---DCAINAGNSGGPLVNI---DG--EIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 281 ---~~~i~~G~SGGPlvd~---~G--~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~ 332 (466)
....|.|+|||||+-. +| .++||++++..-..+.+.+.-+....+|+++.++
T Consensus 269 ~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~~~~gvyT~V~~y~~WI~~~i~ 328 (329)
T 1md8_A 269 PSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEME 328 (329)
T ss_dssp TTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSSSSCEEEEEGGGTHHHHHHHHH
T ss_pred CCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcCCCCcEEEEHHHHHHHHHHHHh
Confidence 2457999999999842 23 5899999976433345677888888899887654
No 130
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.19 E-value=5.6e-11 Score=122.70 Aligned_cols=191 Identities=15% Similarity=0.124 Sum_probs=111.1
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC----------CcEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD----------GRTFEGTVL 204 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~----------g~~~~a~vv 204 (466)
.|-.|.|.... .+...|.|.+|+++ ||||||||+.............+.|.+.. .+.+..+-+
T Consensus 177 ~Pw~v~l~~~~------~~~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~~~V~~i 249 (424)
T 3nxp_A 177 SPWQVMLFRKS------PQELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKI 249 (424)
T ss_dssp CTTEEEEEETT------TTEEEEEEEESSSS-EEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEECEEEE
T ss_pred CCCEEEEeecC------CCCccceeEEEcCC-EEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeEEEEEEE
Confidence 56777775322 12367999999988 99999999952110001112355666532 122334444
Q ss_pred EecC--------CCCEEEEEeCCCC----CCCccccCCCCC----CCCCCEEEEEecCCC----------C-CCceEEeE
Q 012318 205 NADF--------HSDIAIVKINSKT----PLPAAKLGTSSK----LCPGDWVVAMGCPHS----------L-QNTVTAGI 257 (466)
Q Consensus 205 ~~d~--------~~DlAlLkv~~~~----~~~~~~l~~s~~----~~~G~~V~~iG~p~~----------~-~~~~t~G~ 257 (466)
..|+ .+|||||+|+.+. .+.++.|..... +..|..+.+.||... . ...+....
T Consensus 250 i~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~~L~~~~ 329 (424)
T 3nxp_A 250 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVN 329 (424)
T ss_dssp EECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCSBCEEEE
T ss_pred EeCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCccceEEE
Confidence 4443 3599999999752 345666644221 346899999999741 1 23344444
Q ss_pred EeeeecCccCCCCC-CccccEEEEc--------ccCCCCCccceeecC---CC--eEEEEEEeEecCC--CeeeEEEeHH
Q 012318 258 VSCVDRKSSDLGLG-GMRREYLQTD--------CAINAGNSGGPLVNI---DG--EIVGINIMKVAAA--DGLSFAVPID 321 (466)
Q Consensus 258 Vs~~~~~~~~~~~~-~~~~~~i~~~--------~~i~~G~SGGPlvd~---~G--~VVGI~~~~~~~~--~g~~~aip~~ 321 (466)
+.-+....+...+. .....+|... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+.
T Consensus 330 v~ii~~~~C~~~~~~~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~~~pgVyT~Vs 409 (424)
T 3nxp_A 330 LPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVF 409 (424)
T ss_dssp EEBCCHHHHHHTCSSCCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTCCSCEEEEECT
T ss_pred eeEEcHHHhhhhccCcCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCCCCCEEEEEHH
Confidence 44333322211111 1122344442 267999999999942 34 6899999975422 1235667777
Q ss_pred HHHHHHHHHHH
Q 012318 322 SAAKIIEQFKK 332 (466)
Q Consensus 322 ~i~~~l~~l~~ 332 (466)
...+||++.++
T Consensus 410 ~y~~WI~~~i~ 420 (424)
T 3nxp_A 410 RLKKWIQKVID 420 (424)
T ss_dssp TCHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888887654
No 131
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.18 E-value=2.6e-11 Score=97.31 Aligned_cols=60 Identities=25% Similarity=0.346 Sum_probs=54.7
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEec--CCHHHHHHHHhc-CCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPV--QSITEIIEIMGD-RVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v--~~~~~~~~~l~~-~~g~~v~l~v~R~~g 450 (466)
..|++|..|.++|||+++||++||+|++|||+++ .+++++.+++.. ..++.+.|+|.| +|
T Consensus 27 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~g 89 (90)
T 2eaq_A 27 IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRR-YG 89 (90)
T ss_dssp TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEE-EC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEe-CC
Confidence 3589999999999999999999999999999999 899999998876 468899999999 55
No 132
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=1.7e-11 Score=104.69 Aligned_cols=89 Identities=18% Similarity=0.307 Sum_probs=73.4
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEecCCHHHHHHHHhcCCCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSITEIIEIMGDRVGE 439 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~ 439 (466)
..+||+.+..+++. ....|++|..|.++|||+++| |++||+|++|||++|.+++++.++|....|+
T Consensus 31 ~~~lG~~~~~~~~~-------------~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~ 97 (124)
T 1wh1_A 31 QDKLGLTVCYRTDD-------------EDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEENK 97 (124)
T ss_dssp TCCCCEEEECCCCC-------------SSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTCSSCC
T ss_pred CCcccEEEEecCCC-------------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHhCCCC
Confidence 45799988765421 113699999999999999999 9999999999999999999999999887788
Q ss_pred eEEEEEEECCCeEEEEEEEecCCC
Q 012318 440 PLKVVVQRANDQLVTLTVIPEEAN 463 (466)
Q Consensus 440 ~v~l~v~R~~g~~~~l~v~~~~~~ 463 (466)
.+.|+|.| +|+.++....+.+..
T Consensus 98 ~v~l~v~R-~g~~~~~~~~~~~~~ 120 (124)
T 1wh1_A 98 NFSLLIAR-PELQLDEGWMDDDSG 120 (124)
T ss_dssp SCCEEEEE-CSSCCCCCCCCSSCC
T ss_pred EEEEEEEE-CCEEeecccCCCCCC
Confidence 99999999 777766655554433
No 133
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.17 E-value=1.5e-10 Score=111.96 Aligned_cols=151 Identities=20% Similarity=0.188 Sum_probs=82.3
Q ss_pred HhCCceEEEEccccccccccCCceeEEEEEeCC-----CeEEeccccccCCCCCCCCCCceEEEEeCC------------
Q 012318 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDAD-----GTILTCAHVVVDFHGSRALPKGKVDVTLQD------------ 195 (466)
Q Consensus 133 ~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~-----G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~------------ 195 (466)
.+..+|++|... +...|+|++|++. .||||||||+.+.... ...+.|.+..
T Consensus 20 ~~~~aV~rl~~~--------g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~----~~~~~v~~~~~~~~c~~~~~~~ 87 (268)
T 1arb_A 20 DIIRAVGAYSKS--------GTLACTGSLVNNTANDRKMYFLTAHHCGMGTAST----AASIVVYWNYQNSTCRAPNTPA 87 (268)
T ss_dssp TGGGGEEEEEET--------TEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHH----HHTCEEEESCCCSSCCCTTSGG
T ss_pred HhhceEEEEEeC--------CccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCc----ceEEEEEeCCCCCccccccccc
Confidence 467889998632 2367999999972 4999999998641000 0122333210
Q ss_pred --------C-cE-EEEEEEEecCCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEE-------eEE
Q 012318 196 --------G-RT-FEGTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTA-------GIV 258 (466)
Q Consensus 196 --------g-~~-~~a~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~-------G~V 258 (466)
. +. ....+.+....+|||||||+.+. + .+..+++.||.......... +.+
T Consensus 88 ~~~~~~~~~~~~~v~~~i~h~~~~nDIALLrL~~~v--~-----------~~~~~~vsGWG~t~~~~~~~~~~~~~~~~l 154 (268)
T 1arb_A 88 SGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAA--N-----------PAFNLFWAGWDRRDQNYPGAIAIHHPNVAE 154 (268)
T ss_dssp GGSCCCCCCCCEEECEEEEEEETTTTEEEEEESSCC--C-----------GGGCCEEBCEECCSCCCSCEEEEECGGGCS
T ss_pred cccccCCcceEEeccceEecCCCCCceEEEEecCCC--C-----------CCCceEEeCcCccCCCCCcceeeccCCccc
Confidence 0 11 22334444678999999999641 1 23345666665432110000 000
Q ss_pred eeeecCccC---CCCCC-ccccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEe
Q 012318 259 SCVDRKSSD---LGLGG-MRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKV 308 (466)
Q Consensus 259 s~~~~~~~~---~~~~~-~~~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~ 308 (466)
..+....+. ..++. .....+... ...|.|+|||||+..+++++||++++.
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~ 213 (268)
T 1arb_A 155 KRISNSTSPTSFVAWGGGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGP 213 (268)
T ss_dssp CEEEEECSCCEEECTTSSSCSSEEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECS
T ss_pred EEEEeeccccccccccccccCCeEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecC
Confidence 001100010 00111 112344331 248999999999977899999999975
No 134
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.16 E-value=2.3e-10 Score=117.00 Aligned_cols=176 Identities=16% Similarity=0.157 Sum_probs=102.4
Q ss_pred ceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCC--------cEEEEEEEEecC----------CCCEEEEE
Q 012318 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG--------RTFEGTVLNADF----------HSDIAIVK 216 (466)
Q Consensus 155 ~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g--------~~~~a~vv~~d~----------~~DlAlLk 216 (466)
..|.|.+|+++ ||||||||+....... .....+.|.+..- ..+..+-+..|+ .+|||||+
T Consensus 179 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~-~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~ 256 (399)
T 1gpz_A 179 GRGGGALLGDR-WILTAAHTLYPKEHEA-QSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLE 256 (399)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC------CCCEEEESCSBHHHHHHTCCCCEEEEEECSSCCSSSSSCCTTCCEEEE
T ss_pred CCeEEEEeCCC-EEEeChhccccccccc-CCcceEEEEeccccccccccccccceEEEEECCCCCcCCCCCCCCcEEEEE
Confidence 35999999988 9999999997532110 0112344554321 123333333333 35999999
Q ss_pred eCCCC----CCCccccCCCCC-CCCCCEEEEEecCCCC---CCceEEeEEeeeecCccCCCCC------CccccEEEE--
Q 012318 217 INSKT----PLPAAKLGTSSK-LCPGDWVVAMGCPHSL---QNTVTAGIVSCVDRKSSDLGLG------GMRREYLQT-- 280 (466)
Q Consensus 217 v~~~~----~~~~~~l~~s~~-~~~G~~V~~iG~p~~~---~~~~t~G~Vs~~~~~~~~~~~~------~~~~~~i~~-- 280 (466)
|+.+. .+.|+.|..... +..|..+++.||.... ...+....+.-+....+...+. .....+|..
T Consensus 257 L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~ 336 (399)
T 1gpz_A 257 LENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGH 336 (399)
T ss_dssp ESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC-----------CCSEEEEEC
T ss_pred ECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEeccc
Confidence 99763 355666654332 3568999999997532 2233344443333322211110 011223433
Q ss_pred ---cccCCCCCccceeecC---CC--eEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHH
Q 012318 281 ---DCAINAGNSGGPLVNI---DG--EIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 281 ---~~~i~~G~SGGPlvd~---~G--~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~ 332 (466)
....|.|+|||||+-. +| .++||++++..-..+.+.+.-+....+|+++.++
T Consensus 337 ~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~~~~~vyt~V~~y~~WI~~~~~ 396 (399)
T 1gpz_A 337 PSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEME 396 (399)
T ss_dssp GGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTTTTEEEEEEGGGGHHHHHHHTC
T ss_pred CCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcCCCCeEEEEhHHhHHHHHHHhc
Confidence 2367999999999832 23 5899999976433345677888888898887654
No 135
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.14 E-value=9.2e-10 Score=112.91 Aligned_cols=189 Identities=17% Similarity=0.131 Sum_probs=113.5
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC------------------
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------------------ 195 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~------------------ 195 (466)
-.|..|.|..... + .....|.|.+|+++ ||||+|||+.+.. ...+.|.+..
T Consensus 129 e~Pw~v~L~~~~~--g--~~~~~CGGsLIs~~-~VLTAAHCv~~~~------~~~~~V~lG~~~~~~~~~~~~~~~~~~c 197 (408)
T 2xxl_A 129 SRPWMALLRYQQF--G--ESRFLCGGAMISER-YILTAAHCVHGLQ------NDLYEIRLGEHRISTEEDCRQQGRKKKC 197 (408)
T ss_dssp SSTTEEEEEEECS--S--SEEEEEEEEEEETT-EEEECGGGTTTCT------TTEEEEEESCSBTTCSCCEEEETTEEEE
T ss_pred CCCcEEEEEeecC--C--ceeEEEEEEEEECC-EEEEcHHhcCCCC------CceEEEEeeeeECCCccchhhccccccc
Confidence 3577888864321 1 11367999999988 9999999997532 1345555431
Q ss_pred ---CcEEEEEEEEecC-------CCCEEEEEeCCCC----CCCccccCCCCC----CCCCCEEEEEecCCCCC----Cce
Q 012318 196 ---GRTFEGTVLNADF-------HSDIAIVKINSKT----PLPAAKLGTSSK----LCPGDWVVAMGCPHSLQ----NTV 253 (466)
Q Consensus 196 ---g~~~~a~vv~~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~~----~~~G~~V~~iG~p~~~~----~~~ 253 (466)
...+..+-+..|+ .+|||||+|+.+. .+.|+.|..... ...|..+++.||..... ..+
T Consensus 198 ~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L 277 (408)
T 2xxl_A 198 APPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVL 277 (408)
T ss_dssp CCCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBC
T ss_pred CCceEEEeEEEEEeCCCCCccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchh
Confidence 1234444444454 3699999999763 345666654322 46789999999975422 233
Q ss_pred EEeEEeeeecCccCCCCCC-ccccEEEE----cccCCCCCcccee------ecC-CC--eEEEEEEeEecCC---CeeeE
Q 012318 254 TAGIVSCVDRKSSDLGLGG-MRREYLQT----DCAINAGNSGGPL------VNI-DG--EIVGINIMKVAAA---DGLSF 316 (466)
Q Consensus 254 t~G~Vs~~~~~~~~~~~~~-~~~~~i~~----~~~i~~G~SGGPl------vd~-~G--~VVGI~~~~~~~~---~g~~~ 316 (466)
....+.-+....+...+.. .....+.. ....|.|+||||| +-. +| .++||++++.... ..-+.
T Consensus 278 ~~~~v~iv~~~~C~~~~~~~~~~~~iCAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgV 357 (408)
T 2xxl_A 278 LQANVPLQPRSACSQAYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGL 357 (408)
T ss_dssp EEEEEEEECHHHHHHHHTSCCCTTEEEECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEE
T ss_pred eEeeeeecCHHHHHHHhcccCCCceEeecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeE
Confidence 3444433333222110000 01133433 2357899999999 532 33 7899999983221 12356
Q ss_pred EEeHHHHHHHHHHHHHc
Q 012318 317 AVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 317 aip~~~i~~~l~~l~~~ 333 (466)
+.-+....+|+++.++.
T Consensus 358 YTrVs~y~~WI~~~i~~ 374 (408)
T 2xxl_A 358 YTNVGEYVQWITDTMAS 374 (408)
T ss_dssp EEEGGGGHHHHHHHHHH
T ss_pred EEEHHHHHHHHHHHHhh
Confidence 67888899999887654
No 136
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=1.2e-10 Score=95.83 Aligned_cols=84 Identities=24% Similarity=0.379 Sum_probs=62.1
Q ss_pred eeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHh
Q 012318 358 RVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMG 434 (466)
Q Consensus 358 ~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~ 434 (466)
+..+++||+.+....+.....+.. ....|++|..|.++|||+++| |++||+|++|||+++.+ ++++.+++.
T Consensus 12 ~~~~~~lG~~~~~~~~~~~~~~~~------~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 85 (103)
T 2fcf_A 12 REPSKSLGISIVGGRGMGSRLSNG------EVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIR 85 (103)
T ss_dssp CCC-CCCCEEEECCCC-------------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eCCCCceeEEEEccCCCCcccccC------CCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 345689999998765543322211 234699999999999999999 99999999999999998 999999888
Q ss_pred cCCCCeEEEEEEEC
Q 012318 435 DRVGEPLKVVVQRA 448 (466)
Q Consensus 435 ~~~g~~v~l~v~R~ 448 (466)
.. +..+.|+|.|.
T Consensus 86 ~~-~~~v~l~v~r~ 98 (103)
T 2fcf_A 86 KA-GNPVVFMVQSI 98 (103)
T ss_dssp TC-CSSEEEEEECC
T ss_pred hC-CCcEEEEEEEC
Confidence 75 44899999983
No 137
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.12 E-value=1.2e-10 Score=93.67 Aligned_cols=61 Identities=25% Similarity=0.459 Sum_probs=52.5
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEECCCeE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQL 452 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~~g~~ 452 (466)
..|++|..|.++|||+++||++||+|++|||+++. +++++.+++... ++.+.|+|.| ++..
T Consensus 26 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r-~~~~ 88 (91)
T 2vsp_A 26 LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSS-GKNVTLLVCG-KKAQ 88 (91)
T ss_dssp CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-CSEEEEEEEC-----
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEe-CCcc
Confidence 35889999999999999999999999999999999 899999998876 8999999999 5543
No 138
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=99.11 E-value=2.1e-09 Score=118.49 Aligned_cols=186 Identities=20% Similarity=0.240 Sum_probs=114.4
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv~ 205 (466)
.|-.|.|.... +...|+|.||+++ +|||||||+..... ...+.|.+.. .+.+...-+.
T Consensus 573 ~PW~VsL~~~~-------~~~~CGGSLIs~~-wVLTAAHCv~~~~~-----~~~~~V~lG~~~~~~~~~~~q~~~V~~i~ 639 (791)
T 4dur_A 573 WPWQVSLRTRF-------GMHFCGGTLISPE-WVLTAAHCLEKSPR-----PSSYKVILGAHQEVNLEPHVQEIEVSRLF 639 (791)
T ss_dssp STTEEEEECTT-------SCEEEEEEEEETT-EEEECGGGGSSCCC-----GGGCEEEESCCBSSSCCTTCEEEEEEEEE
T ss_pred CCeEEEEEecC-------CCeEEEEEEEeCC-EEEECHHHcCCcCC-----CceEEEEeccccccCCCCccEEEEEEEEE
Confidence 46777775421 2467999999988 99999999975311 1234454432 2345554445
Q ss_pred ecC-CCCEEEEEeCCC----CCCCccccCCCC-CCCCCCEEEEEecCCCC----CCceEEeEEeeeecCccCC---CCCC
Q 012318 206 ADF-HSDIAIVKINSK----TPLPAAKLGTSS-KLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDL---GLGG 272 (466)
Q Consensus 206 ~d~-~~DlAlLkv~~~----~~~~~~~l~~s~-~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~---~~~~ 272 (466)
.++ .+|||||+|+.+ ..+.++.|.... .+..|..+++.||.... ...+....+..+....+.. ....
T Consensus 640 ~hp~~nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~ 719 (791)
T 4dur_A 640 LEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGR 719 (791)
T ss_dssp ECTTCCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTC
T ss_pred CCCCCCceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCC
Confidence 554 579999999975 244566665432 35678999999997532 2233444443333322211 1111
Q ss_pred ccccEEEE-----cccCCCCCccceeecCC-C--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHHc
Q 012318 273 MRREYLQT-----DCAINAGNSGGPLVNID-G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 273 ~~~~~i~~-----~~~i~~G~SGGPlvd~~-G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~~ 333 (466)
.....|.. ....|.|+|||||+-.+ | .|+||++++..-. ..-+.+.-+.....||++.++.
T Consensus 720 i~~~~iCAg~~~gg~daC~GDSGGPLv~~~~~~~~LvGIvS~G~gC~~~~~PgVYTrVs~y~dWI~~~i~~ 790 (791)
T 4dur_A 720 VQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMRN 790 (791)
T ss_dssp CCTTEEEESCSSSCCCBCCSCTTCEEEEEETTEEEEEEECCTTTCCBBTTBCEEEEEGGGTHHHHHHHHHH
T ss_pred CCCCeEEeccCCCCCCCCCCCcccceEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHHh
Confidence 22234443 24568999999999433 3 5999999875321 2246678888899999887653
No 139
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=3.1e-10 Score=92.92 Aligned_cols=76 Identities=21% Similarity=0.347 Sum_probs=62.2
Q ss_pred eeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhc
Q 012318 358 RVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGD 435 (466)
Q Consensus 358 ~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~ 435 (466)
+...++||+.+....+ ...|++|..|.++|||+++||++||+|++|||+++.++ .++...+..
T Consensus 18 ~~~~~~lG~~~~~~~~---------------~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~ 82 (100)
T 2eeh_A 18 KSPAGRLGFSVRGGSE---------------HGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS 82 (100)
T ss_dssp CCSSSSCSEEEECCTT---------------TTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS
T ss_pred ECCCCCccEEEEcccc---------------CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC
Confidence 3456799999876321 23689999999999999999999999999999999985 666666654
Q ss_pred CCCCeEEEEEEECCCe
Q 012318 436 RVGEPLKVVVQRANDQ 451 (466)
Q Consensus 436 ~~g~~v~l~v~R~~g~ 451 (466)
++.+.|+|.| +|+
T Consensus 83 --~~~v~l~v~R-~g~ 95 (100)
T 2eeh_A 83 --SSRLHMMVRR-MGS 95 (100)
T ss_dssp --CSSEEEEEEE-CSC
T ss_pred --CCEEEEEEEE-CCc
Confidence 7889999999 664
No 140
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.08 E-value=8.6e-11 Score=94.48 Aligned_cols=61 Identities=28% Similarity=0.420 Sum_probs=55.4
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHH--HHHHHHhcCCCCeEEEEEEECCCeE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSIT--EIIEIMGDRVGEPLKVVVQRANDQL 452 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~--~~~~~l~~~~g~~v~l~v~R~~g~~ 452 (466)
..|++|..|.++|||+++||++||+|++|||+++.++. ++..++.. .++.+.|+|.| +|+.
T Consensus 26 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~g~~ 88 (91)
T 2pkt_A 26 EQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKG-CTDNLTLTVAR-SEHE 88 (91)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEE-ECCC
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE-CCcc
Confidence 36899999999999999999999999999999999988 88888877 88999999999 6654
No 141
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.08 E-value=2.2e-10 Score=92.10 Aligned_cols=66 Identities=30% Similarity=0.427 Sum_probs=51.7
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEE
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVI 458 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v~ 458 (466)
.|++|.+|.++|||+++| |++||+|++|||+++. +++++.+++... ++.+.|+|.| +|+..++++.
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~r-~g~~~~~~v~ 91 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS-KGKLKMVVQR-DERATLLNVP 91 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEEEC-----------
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCcEEEEEEe-CCceeeeeCC
Confidence 589999999999999999 9999999999999999 999999888764 4589999999 7877776654
No 142
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.07 E-value=2.1e-10 Score=93.23 Aligned_cols=81 Identities=17% Similarity=0.285 Sum_probs=62.9
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhc-CCCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGE 439 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~ 439 (466)
.++||+.+..-.+ ...+.....|++|..|.++|||+++||++||+|++|||+++.++.++..++.. ..++
T Consensus 13 ~~glG~~i~~g~~---------~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 83 (97)
T 2w4f_A 13 TGGLGISIAGGKG---------STPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGT 83 (97)
T ss_dssp TTBSSEEEEECTT---------SCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSCS
T ss_pred CCceeEEEECCcc---------CCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCCC
Confidence 6799998764211 01122345799999999999999999999999999999999998776543322 4789
Q ss_pred eEEEEEEECCCe
Q 012318 440 PLKVVVQRANDQ 451 (466)
Q Consensus 440 ~v~l~v~R~~g~ 451 (466)
.+.|+|.| +|+
T Consensus 84 ~v~l~v~R-~g~ 94 (97)
T 2w4f_A 84 AVQMRVWR-ERE 94 (97)
T ss_dssp EEEEEEEC-CSS
T ss_pred eEEEEEEe-CCc
Confidence 99999999 665
No 143
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.06 E-value=2.9e-10 Score=95.10 Aligned_cols=70 Identities=17% Similarity=0.335 Sum_probs=62.1
Q ss_pred CcceeecccCCCChhhhCCC-CCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEec
Q 012318 390 KSGVLVPVVTPGSPAHLAGF-LPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPE 460 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~ 460 (466)
..|++|..|.++|||+++|| ++||+|++|||+++.+ ++++.+++....|+.+.|+|.| +|+..++++.+.
T Consensus 25 ~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R-~g~~~~~~~~~~ 97 (112)
T 1qau_A 25 KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILR-GPEGFTTHLETT 97 (112)
T ss_dssp SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEE-CCTTSEEEEEEE
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEe-CCcccceEeeee
Confidence 35899999999999999998 9999999999999999 9999999987778999999999 777666666654
No 144
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.06 E-value=1.6e-11 Score=103.78 Aligned_cols=91 Identities=26% Similarity=0.357 Sum_probs=67.4
Q ss_pred eeecccc----cceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHH
Q 012318 358 RVVRPWL----GLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIM 433 (466)
Q Consensus 358 ~~~~~~l----G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l 433 (466)
++.++|+ |+.+...+..+-..+.. ....|++|..|.++|||+++||++||+|++|||+++.++.++...+
T Consensus 11 ~v~r~~l~~~~~v~l~~~~~~lG~~~~~------~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~ 84 (117)
T 1uit_A 11 RKDRPYVEEPRHVKVQKGSEPLGISIVS------GEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARL 84 (117)
T ss_dssp CSCCCCSCCCEEEEEECSSCCCCEEEEE------CTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHH
T ss_pred ccccccCCCCEEEEEEeCCCCccEEEEc------cCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 6678888 77776543111000100 1236899999999999999999999999999999999998777655
Q ss_pred h-cCCCCeEEEEEEECCCeEEEE
Q 012318 434 G-DRVGEPLKVVVQRANDQLVTL 455 (466)
Q Consensus 434 ~-~~~g~~v~l~v~R~~g~~~~l 455 (466)
. ...++.+.|+|.| +++.+++
T Consensus 85 ~~~~~g~~v~l~v~r-~~~~~~~ 106 (117)
T 1uit_A 85 IIGQQCDTITILAQY-NPHVHQL 106 (117)
T ss_dssp HTTSCCSEEEEEECC-CSCCCCC
T ss_pred HHHcCCCeEEEEEEE-CCchhhh
Confidence 3 3678899999999 6665443
No 145
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.05 E-value=4.3e-10 Score=95.86 Aligned_cols=82 Identities=23% Similarity=0.372 Sum_probs=64.0
Q ss_pred eecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhc
Q 012318 359 VVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGD 435 (466)
Q Consensus 359 ~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~ 435 (466)
..+++||+.+....+........ ....|++|..|.++|||+++| |++||+|++|||+++.+ ++++.+++..
T Consensus 33 ~~~~~lGi~v~~~~~~~~~~~~~------~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 106 (123)
T 2iwq_A 33 EPSKSLGISIVGGRGMGSRLSNG------EVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRK 106 (123)
T ss_dssp CTTSCCSEEEEECC---------------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred cCCCCccEEEEeccCcccccccc------CCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34689999998776544332211 234699999999999999999 99999999999999988 8999998876
Q ss_pred CCCCeEEEEEEE
Q 012318 436 RVGEPLKVVVQR 447 (466)
Q Consensus 436 ~~g~~v~l~v~R 447 (466)
. ++.++|+|.|
T Consensus 107 ~-~~~v~l~v~r 117 (123)
T 2iwq_A 107 A-GNPVVFMVQS 117 (123)
T ss_dssp C-CSSEEEEEEC
T ss_pred C-CCeEEEEEEE
Confidence 5 4589999998
No 146
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=99.05 E-value=1.1e-09 Score=118.40 Aligned_cols=186 Identities=18% Similarity=0.150 Sum_probs=104.2
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~---------g~~~~a~vv 204 (466)
-.|-.|.|..... .+...|.|.+|+++ ||||+|||+.+... ...+.|.+.. +..+..+-+
T Consensus 398 ~~Pw~v~L~~~~~-----~~~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~V~~G~~~~~~~~~~~~~~~V~~i 466 (625)
T 2f83_A 398 EWPWQVTLHTTSP-----TQRHLCGGSIIGNQ-WILTAAHCFYGVES-----PKILRVYSGILNQSEIKEDTSFFGVQEI 466 (625)
T ss_dssp SSTTEEEEEECSS-----SSEEEEEEEECSSS-EEEECGGGGSSCCC-----GGGEEEEESCSBGGGCCSSCCCEEEEEE
T ss_pred CCCeEEEEEEecC-----CCcEEEEEEEECCC-EEEEcHHhCCCCCC-----CceEEEEEEeccCCCCCCCceEEeEEEE
Confidence 4577888865321 13467999999988 99999999975321 1345555421 233555555
Q ss_pred EecC-------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEeEEeeeecCccC
Q 012318 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSD 267 (466)
Q Consensus 205 ~~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~ 267 (466)
..|+ .+|||||+|+.+. .+.|+.|.... ....++.+++.||..... ..+....+.-+....+.
T Consensus 467 i~Hp~y~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C~ 546 (625)
T 2f83_A 467 IIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQ 546 (625)
T ss_dssp EECTTCCBTTTBCCCEEEEESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHHH
T ss_pred EECCccCcCCccccEEEEEECCcccCCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHHH
Confidence 5554 3699999999763 34566665432 235688899999975321 12222222222221111
Q ss_pred CCCC--CccccEE-----EEcccCCCCCccceeecC-CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHH
Q 012318 268 LGLG--GMRREYL-----QTDCAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQF 330 (466)
Q Consensus 268 ~~~~--~~~~~~i-----~~~~~i~~G~SGGPlvd~-~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l 330 (466)
..+. ......| ......|.|+|||||+-. +| .++||++++..-. ..-+.+.-+....+||++.
T Consensus 547 ~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyT~V~~y~~WI~~~ 621 (625)
T 2f83_A 547 KRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK 621 (625)
T ss_dssp TTCTTSCCCTTBCCC----------CCCTTCEEEEEETTEEEEEEEEEECCC----CCCCEEEEGGGGHHHHHHT
T ss_pred HHhccCCCCCCeEEeecCCCCCcCCCCCcccceEEEECCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 1110 0011111 123457899999999943 45 6999999975311 1235567777788888764
No 147
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.04 E-value=2.7e-10 Score=92.25 Aligned_cols=75 Identities=17% Similarity=0.360 Sum_probs=62.2
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVG 438 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g 438 (466)
...||+.+..-. ....|++|..|.++|||+++||++||+|++|||+++.++ +++.+++....
T Consensus 15 ~~~lG~~l~~g~---------------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~- 78 (94)
T 1vb7_A 15 PAPWGFRISGGR---------------DFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSA- 78 (94)
T ss_dssp SSCCSBCCEEET---------------TTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-
T ss_pred CCCccEEEeccc---------------CCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-
Confidence 457888875411 124689999999999999999999999999999999997 89998887754
Q ss_pred CeEEEEEEECCCeE
Q 012318 439 EPLKVVVQRANDQL 452 (466)
Q Consensus 439 ~~v~l~v~R~~g~~ 452 (466)
+.+.|+|.| +|+.
T Consensus 79 ~~v~l~v~R-~g~~ 91 (94)
T 1vb7_A 79 SPLRLQLDR-SSGP 91 (94)
T ss_dssp SSEEEEEEC-CCCC
T ss_pred CcEEEEEEE-CCcC
Confidence 789999999 6653
No 148
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.03 E-value=1.4e-10 Score=94.25 Aligned_cols=61 Identities=23% Similarity=0.388 Sum_probs=55.2
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQL 452 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~ 452 (466)
..|++|..|.++|||+++||++||+|++|||+++.+ ++++..++... |+.+.|+|.| +++.
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r-~~~~ 91 (96)
T 2v90_A 29 RPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQ-GSCVSLTVVD-PEAD 91 (96)
T ss_dssp CEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEEEC-CCTT
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEC-CCCc
Confidence 468999999999999999999999999999999999 78999888775 8999999999 5543
No 149
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.03 E-value=4.9e-10 Score=89.21 Aligned_cols=60 Identities=18% Similarity=0.359 Sum_probs=54.5
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|.+|.++|||+++||++||+|++|||+++.+ ++++.+++.... +.+.|+|.| +++
T Consensus 25 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R-~~~ 86 (87)
T 2pa1_A 25 HTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSP-SPLRLQLDR-ITS 86 (87)
T ss_dssp TEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCC-SSEEEEEEE-CCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEe-cCC
Confidence 368999999999999999999999999999999999 899999998755 889999999 553
No 150
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.02 E-value=2.5e-09 Score=114.28 Aligned_cols=185 Identities=16% Similarity=0.088 Sum_probs=94.1
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC----------CCcEEEEEE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ----------DGRTFEGTV 203 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~----------~g~~~~a~v 203 (466)
-.|-.|.|.. .....+.|.+|+++ ||||||||+.... ...+.|.+. ....+..+-
T Consensus 332 ~~Pw~v~l~~--------~~~~~CGGsLIs~~-~VLTAAHCv~~~~------~~~~~V~~G~~~~~~~~~~~~~~~~V~~ 396 (565)
T 2xrc_A 332 DLPWQVAIKD--------ASGITCGGIYIGGC-WILTAAHCLRASK------THRYQIWTTVVDWIHPDLKRIVIEYVDR 396 (565)
T ss_dssp CCTTBCEEEE--------SSSCCCCCEEEETT-EEEECHHHHTTCS------SCCEEEEC-------------CEEEEEE
T ss_pred CCCcEEEEec--------CCceeeeEEEEeCC-EEEEChhhcccCC------CcceEEEEEEeeccCCCCCccEEEEEEE
Confidence 3456666652 12356999999988 9999999997532 123444432 123344454
Q ss_pred EEecC-------CCCEEEEEeCCCCC--------CCccccCCC-CCCCCCCEEEEEecCCCCC----CceEEeEEeeeec
Q 012318 204 LNADF-------HSDIAIVKINSKTP--------LPAAKLGTS-SKLCPGDWVVAMGCPHSLQ----NTVTAGIVSCVDR 263 (466)
Q Consensus 204 v~~d~-------~~DlAlLkv~~~~~--------~~~~~l~~s-~~~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~~ 263 (466)
+..|+ .+|||||+|+.+.. ..|+-|... ..+..|+.+++.||..... ..+....+..+..
T Consensus 397 ii~Hp~Y~~~~~~nDIALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~ 476 (565)
T 2xrc_A 397 IIFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISN 476 (565)
T ss_dssp EEECTTCCTTTCTTCCEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSC
T ss_pred EEeCCCCCCCcccccceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHH
Confidence 55554 46999999997532 345555432 2356799999999975422 1222222322211
Q ss_pred CccCCCCCCccccEEEE-----cccCCCCCccceeecC--CC--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHH
Q 012318 264 KSSDLGLGGMRREYLQT-----DCAINAGNSGGPLVNI--DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 264 ~~~~~~~~~~~~~~i~~-----~~~i~~G~SGGPlvd~--~G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~ 332 (466)
-...+........++.. ....+.|+|||||+-. +| .++||++++..-. ..-+.+.-+....+||++.+.
T Consensus 477 C~~~~~~~~~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~~PgVYTrVs~y~~WI~~~i~ 556 (565)
T 2xrc_A 477 CSKFYGNRFYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYHVG 556 (565)
T ss_dssp THHHHTTSCCTTTEEEEEEC----------CCCEEEEECTTCCEEEEEEECC------CCCCEEEEEGGGGHHHHHHHC-
T ss_pred hHHhhccCcCCCceEEeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCCCCCCCCCEEEEEHHHHHHHHHHHhc
Confidence 00001100011113332 2357899999999942 45 4899999975421 223566778888888887654
Q ss_pred c
Q 012318 333 N 333 (466)
Q Consensus 333 ~ 333 (466)
.
T Consensus 557 ~ 557 (565)
T 2xrc_A 557 R 557 (565)
T ss_dssp -
T ss_pred c
Confidence 3
No 151
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.02 E-value=3.6e-10 Score=93.14 Aligned_cols=77 Identities=19% Similarity=0.298 Sum_probs=64.5
Q ss_pred ecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCC
Q 012318 360 VRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRV 437 (466)
Q Consensus 360 ~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~ 437 (466)
...++|+.+..-. +...+++|..|.++|||+++||++||+|++|||+++.+ ++++.+++...
T Consensus 13 ~~~~lG~~l~~g~---------------~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 76 (103)
T 1v5l_A 13 GPAPWGFRLSGGI---------------DFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA- 76 (103)
T ss_dssp SSSCCSBCCEEET---------------TTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTC-
T ss_pred CCCCcCEEEeccc---------------cCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-
Confidence 3468899875311 12358999999999999999999999999999999999 99999988876
Q ss_pred CCeEEEEEEECCCeEE
Q 012318 438 GEPLKVVVQRANDQLV 453 (466)
Q Consensus 438 g~~v~l~v~R~~g~~~ 453 (466)
++.+.|+|.| +++.+
T Consensus 77 g~~v~l~v~R-~g~~~ 91 (103)
T 1v5l_A 77 SYQLCLKIDR-AETRL 91 (103)
T ss_dssp CSEEECEECC-CTTTT
T ss_pred CCeEEEEEEE-CCeEc
Confidence 8999999999 66643
No 152
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=1.4e-09 Score=90.63 Aligned_cols=81 Identities=19% Similarity=0.297 Sum_probs=61.5
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHH--HHHhcCCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEII--EIMGDRVG 438 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--~~l~~~~g 438 (466)
...||+.+..-.+ ...+.....|++|..|.++|||+++||++||+|++|||+++.++.++. ..+. ..+
T Consensus 25 ~~glG~~i~~g~~---------~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~-~~g 94 (110)
T 1x5q_A 25 TGGLGISIAGGKG---------STPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALR-GAG 94 (110)
T ss_dssp SSSCSEEEEECTT---------SCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH-SCC
T ss_pred CCeeeEEEEcccc---------CCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhh-CCC
Confidence 6789998753211 011223457999999999999999999999999999999999854443 3333 378
Q ss_pred CeEEEEEEECCCeE
Q 012318 439 EPLKVVVQRANDQL 452 (466)
Q Consensus 439 ~~v~l~v~R~~g~~ 452 (466)
+.+.|+|.| +|+.
T Consensus 95 ~~v~l~v~R-~g~~ 107 (110)
T 1x5q_A 95 TAVQMRVWR-ESGP 107 (110)
T ss_dssp SEEEEEEEE-CSSC
T ss_pred CeEEEEEEE-CCcc
Confidence 999999999 6654
No 153
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.00 E-value=7.1e-10 Score=99.39 Aligned_cols=83 Identities=20% Similarity=0.387 Sum_probs=68.1
Q ss_pred eeecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHH-HH-HHHhc
Q 012318 358 RVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITE-II-EIMGD 435 (466)
Q Consensus 358 ~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~-~~-~~l~~ 435 (466)
+..++|||+.+... ..|++|..|.++|||+++||++||+|++|||+++.++.+ +. .++..
T Consensus 12 k~~~~~lG~~~~~~------------------~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~ 73 (166)
T 1w9e_A 12 KDQDGKIGLRLKSI------------------DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQ 73 (166)
T ss_dssp CCTTSCCSEEEEEE------------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred eCCCCcEeEEEEeC------------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 34578999998752 268999999999999999999999999999999999987 55 44445
Q ss_pred CCCCeEEEEEEECCCeEEEEEEEe
Q 012318 436 RVGEPLKVVVQRANDQLVTLTVIP 459 (466)
Q Consensus 436 ~~g~~v~l~v~R~~g~~~~l~v~~ 459 (466)
..++.++|+|.| +++.++++++.
T Consensus 74 ~~~~~v~l~vr~-~~~~~~v~l~~ 96 (166)
T 1w9e_A 74 AFGEKITMTIRD-RPFERTITMHK 96 (166)
T ss_dssp CCSSEEEEEEEC-CTTCEEEEEEC
T ss_pred CCCCEEEEEEEc-CCCcEEEEEec
Confidence 678899999943 44777787775
No 154
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.00 E-value=1.4e-10 Score=90.70 Aligned_cols=56 Identities=32% Similarity=0.445 Sum_probs=51.3
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEE
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R 447 (466)
.|++|.+|.++|||+++| |++||+|++|||+++. +++++.+++.... +.+.++|.|
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R 79 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQR 79 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTST-TEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CeEEEEEEe
Confidence 589999999999999999 9999999999999999 9999998887644 489999988
No 155
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.00 E-value=2.2e-10 Score=94.39 Aligned_cols=70 Identities=19% Similarity=0.230 Sum_probs=59.1
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEecC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPEE 461 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~~ 461 (466)
..+++|..|.++|||+++||++||+|++|||+++.++ .++..++.. .++.+.|+|.| +++..+++++|..
T Consensus 28 ~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~g~~~~~~v~p~~ 99 (103)
T 1wf7_A 28 NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKA-CTGSLNMTLQR-ASAAAKSEPVSSG 99 (103)
T ss_dssp TEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHH-CSSEEEEEECC-CSCCCCCCCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCCcCCCCCCCCC
Confidence 3578999999999999999999999999999999987 566665654 47889999999 8887777777654
No 156
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.00 E-value=8.1e-10 Score=121.62 Aligned_cols=190 Identities=21% Similarity=0.221 Sum_probs=107.2
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC-CCcEEEEEEEEecC-----
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ-DGRTFEGTVLNADF----- 208 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~-~g~~~~a~vv~~d~----- 208 (466)
.|..|.|...... .+...|+|.+|+++ ||||+|||+..... ...+.|.+. ..+.+..+-+..|+
T Consensus 468 ~Pw~~~v~~~~~~----~~~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~ 537 (741)
T 3hrz_D 468 QPWQAKISVIRPS----KGHESCMGAVVSEY-FVLTAAHCFTVDDK-----EHSIKVSVGGEKRDLEIEVVLFHPNYNIN 537 (741)
T ss_dssp CTTEEEEEECCCC---------EEEEECSSS-EEEECGGGCC----------CCEEEEETTCSCCEEEEEEEECTTCCTT
T ss_pred cCCeEEEEEEeCC----CCCCEEEEEEecCC-EEEEchhhccccCC-----cceEEEEeCCCceEEEEEEEEECCCCCcc
Confidence 4555555543211 23467999999998 99999999965211 245677775 33455555555554
Q ss_pred -----------CCCEEEEEeCCCC----CCCccccCCC------CCCCCCCEEEEEecCCCCCC------------ceEE
Q 012318 209 -----------HSDIAIVKINSKT----PLPAAKLGTS------SKLCPGDWVVAMGCPHSLQN------------TVTA 255 (466)
Q Consensus 209 -----------~~DlAlLkv~~~~----~~~~~~l~~s------~~~~~G~~V~~iG~p~~~~~------------~~t~ 255 (466)
.+|||||+|+.+. .+.++.|... ..+..|..+.+.||...... .+..
T Consensus 538 ~~~~~~~~~~~~nDIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~ 617 (741)
T 3hrz_D 538 GKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTR 617 (741)
T ss_dssp TTGGGTCSCCCTTCCEEEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEE
T ss_pred cccccccCCccCCcEEEEEECCcCcCCCCccccccCCcccccchhccCCCCccccccccccccccccceecccccccccc
Confidence 3599999998753 3456666432 12456777777777532221 1222
Q ss_pred eEEeeee---cCccCC------CC-------CCccccEEEE-------cccCCCCCccceeecCC-C--eEEEEEEeEec
Q 012318 256 GIVSCVD---RKSSDL------GL-------GGMRREYLQT-------DCAINAGNSGGPLVNID-G--EIVGINIMKVA 309 (466)
Q Consensus 256 G~Vs~~~---~~~~~~------~~-------~~~~~~~i~~-------~~~i~~G~SGGPlvd~~-G--~VVGI~~~~~~ 309 (466)
..+.-.. +..+.. .+ ......++.. +...|.|+|||||+-.+ | .++||++++..
T Consensus 618 ~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~ 697 (741)
T 3hrz_D 618 KEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVV 697 (741)
T ss_dssp EEEEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESS
T ss_pred ceeEeecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCC
Confidence 2222111 000000 00 0111234444 24478999999999432 3 39999999862
Q ss_pred CC--C-----ee-----eEEEeHHHHHHHHHHHHHcC
Q 012318 310 AA--D-----GL-----SFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 310 ~~--~-----g~-----~~aip~~~i~~~l~~l~~~g 334 (466)
.. . .- +++.-+....+||++.++..
T Consensus 698 ~~C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~~ 734 (741)
T 3hrz_D 698 DVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDE 734 (741)
T ss_dssp CCCC------CCCTTCEEEEEEGGGSHHHHHHHTTTS
T ss_pred cccCCcccccCCCCCccceEEEhHHhHHHHHHHhcCC
Confidence 11 1 11 67788999999999987664
No 157
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.99 E-value=9.3e-10 Score=93.93 Aligned_cols=61 Identities=23% Similarity=0.406 Sum_probs=55.3
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhc-CCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGD-RVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~-~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++||++||+|++|||++|.++ +++..++.. ..|+.++|+|.| +++
T Consensus 50 ~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~~ 113 (124)
T 3tsv_A 50 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQK-KKD 113 (124)
T ss_dssp TSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEE-CHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEE-CCc
Confidence 3689999999999999999999999999999999998 899887775 788999999999 554
No 158
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=1.5e-09 Score=86.75 Aligned_cols=68 Identities=13% Similarity=0.257 Sum_probs=59.4
Q ss_pred ccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhh-CCCCCCCEEEEECCEecC--CHHHHHHHHhcCCC
Q 012318 362 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVG 438 (466)
Q Consensus 362 ~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~-aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g 438 (466)
..||+.+.. ....+++|..|.++|||++ +||++||+|++|||+++. +++++.++|....+
T Consensus 13 ~~lG~~i~~-----------------~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 75 (88)
T 1kwa_A 13 EPMGITLKM-----------------NELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRG 75 (88)
T ss_dssp SCCCEEEEC-----------------SCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE
T ss_pred CceeEEEEe-----------------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 568998764 1135799999999999999 899999999999999999 89999999987666
Q ss_pred CeEEEEEEE
Q 012318 439 EPLKVVVQR 447 (466)
Q Consensus 439 ~~v~l~v~R 447 (466)
.++|+|.|
T Consensus 76 -~v~l~v~r 83 (88)
T 1kwa_A 76 -SITFKIVP 83 (88)
T ss_dssp -EEEEEEEC
T ss_pred -cEEEEEEC
Confidence 89999998
No 159
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=98.98 E-value=1.2e-09 Score=114.47 Aligned_cols=192 Identities=20% Similarity=0.212 Sum_probs=110.6
Q ss_pred HhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-CcEEEEEEEEecC---
Q 012318 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-GRTFEGTVLNADF--- 208 (466)
Q Consensus 133 ~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-g~~~~a~vv~~d~--- 208 (466)
.-.|..|.|...... .+...|.|.+|+++ ||||+|||+.... ....+.|.+.. .+.+..+-+..|+
T Consensus 224 ~~~Pw~v~l~~~~~~----~~~~~CgGsLIs~~-~VLTAAHC~~~~~-----~~~~~~v~~G~~~~~~~v~~i~~Hp~y~ 293 (497)
T 1rrk_A 224 HKQPWQAKISVIRPS----KGHESCMGAVVSEY-FVLTAAHCFTVDD-----KEHSIKVSVGGEKRDLEIEVVLFHPNYN 293 (497)
T ss_dssp HHSTTEEEEEECC------CCCEEEEEEECSSS-EEEECGGGCCTTC-----CGGGEEEEETTCSSCEEEEEEEECTTCC
T ss_pred cccCcEEEEEEEcCC----CCCceeEEEEecCC-EEEECHHhCCCCC-----CceEEEEEeCCccceeeeEEEEeCCCcc
Confidence 345778888643211 23467999999988 9999999997531 11456777654 3445555444443
Q ss_pred -------------CCCEEEEEeCCCC----CCCccccCCCC------CCCCCCEEEEEecCCCC------------CCce
Q 012318 209 -------------HSDIAIVKINSKT----PLPAAKLGTSS------KLCPGDWVVAMGCPHSL------------QNTV 253 (466)
Q Consensus 209 -------------~~DlAlLkv~~~~----~~~~~~l~~s~------~~~~G~~V~~iG~p~~~------------~~~~ 253 (466)
.+|||||+|+.+. .+.|+.|.... .+..|..+++.||.... ...+
T Consensus 294 ~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~L 373 (497)
T 1rrk_A 294 INGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKL 373 (497)
T ss_dssp TTTTGGGTCSSCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCE
T ss_pred ccccccccccccCCCcEEEEEECCCCcCCCCeeeeeCCCCCccccccccCCCCchhcccccccCCccccceeeccCCCcc
Confidence 3599999999763 35566665422 24456655555543211 1222
Q ss_pred EEeEEeeee---cCccCC------CCC-------CccccEEEEc-------ccCCCCCccceeecC-CC--eEEEEEEeE
Q 012318 254 TAGIVSCVD---RKSSDL------GLG-------GMRREYLQTD-------CAINAGNSGGPLVNI-DG--EIVGINIMK 307 (466)
Q Consensus 254 t~G~Vs~~~---~~~~~~------~~~-------~~~~~~i~~~-------~~i~~G~SGGPlvd~-~G--~VVGI~~~~ 307 (466)
....+.-.. ...|.. ++. ......++.. ...|.|+|||||+-. +| .++||++++
T Consensus 374 ~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~g 453 (497)
T 1rrk_A 374 TRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWG 453 (497)
T ss_dssp EEEEEEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEE
T ss_pred eeeeEEEecCcccchhhhhhhhcccccccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEEEEec
Confidence 222232222 111210 111 1122345543 357999999999943 34 499999998
Q ss_pred ec-CCC------ee-----eEEEeHHHHHHHHHHHHHcC
Q 012318 308 VA-AAD------GL-----SFAVPIDSAAKIIEQFKKNG 334 (466)
Q Consensus 308 ~~-~~~------g~-----~~aip~~~i~~~l~~l~~~g 334 (466)
.. ... +. +++.-+....+|+++.++..
T Consensus 454 ~~~~C~~~~~~~~~P~~~r~vyt~V~~~~~WI~~~~~~~ 492 (497)
T 1rrk_A 454 VVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDE 492 (497)
T ss_dssp SCCCC--------CCTTCEEEEEEGGGGHHHHHHHTTTS
T ss_pred CCCCCCCccccCCCCCccceeeeeHHHHHHHHHHHhCcc
Confidence 62 111 11 25667888999998877654
No 160
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.97 E-value=9.1e-10 Score=87.79 Aligned_cols=59 Identities=22% Similarity=0.281 Sum_probs=52.7
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~~g 450 (466)
..+++|..|.++|||+++||++||+|++|||+++.++ .++..++... ++.+.|+|.| ++
T Consensus 26 ~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R-~g 86 (88)
T 2uzc_A 26 NMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGC-TGSLNMTLQR-ES 86 (88)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEC-CC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEe-CC
Confidence 3589999999999999999999999999999999998 7877777654 8899999999 55
No 161
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.97 E-value=4.5e-10 Score=91.33 Aligned_cols=60 Identities=23% Similarity=0.470 Sum_probs=55.5
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ ++++.+++.. .++.+.|+|.| +++
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~~~ 93 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEAALLIEY-DVS 93 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEE-ECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCC
Confidence 4689999999999999999 99999999999999999 9999998887 78999999999 554
No 162
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.96 E-value=1.1e-09 Score=87.73 Aligned_cols=58 Identities=26% Similarity=0.540 Sum_probs=53.4
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEEC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRA 448 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~ 448 (466)
..|++|..|.++|||+++||++||+|++|||+++.++ +++.+++... ++.+.|+|.|.
T Consensus 27 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~ 86 (90)
T 2he4_A 27 RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR-EDEARLLVVGP 86 (90)
T ss_dssp SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-SSEEEEEEECC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCcEEEEEEcc
Confidence 3589999999999999999999999999999999998 8999888775 88999999993
No 163
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.95 E-value=2.8e-10 Score=96.33 Aligned_cols=64 Identities=19% Similarity=0.381 Sum_probs=57.8
Q ss_pred CCcceeecccCC--CChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEECCCeEEE
Q 012318 389 VKSGVLVPVVTP--GSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQLVT 454 (466)
Q Consensus 389 ~~~g~~V~~V~~--~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~~g~~~~ 454 (466)
...|++|..|.+ +|||+++||++||+|++|||++|.+| +++.+++... ++.+.|+|.| +++..+
T Consensus 42 ~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~-g~~v~l~v~R-~g~~~~ 109 (118)
T 2yub_A 42 YATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQT-SQTLQLLIEH-DPVPQR 109 (118)
T ss_dssp SCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC-SSCEEEEEEE-CSSCCC
T ss_pred CCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhC-CCEEEEEEEE-CCEEEe
Confidence 347999999999 99999999999999999999999999 9999999877 8899999999 776543
No 164
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.95 E-value=4.9e-10 Score=104.46 Aligned_cols=89 Identities=22% Similarity=0.269 Sum_probs=73.9
Q ss_pred ecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCC-CCEEEEECCEecCCHHHHHHHHhcCCC
Q 012318 360 VRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLP-SDVVIKFDGKPVQSITEIIEIMGDRVG 438 (466)
Q Consensus 360 ~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~-GD~I~~ing~~v~~~~~~~~~l~~~~g 438 (466)
.++++|+.+..++++.. ...|++|.+|.++|||+++||++ ||+|++|||+ +.+++++.+++....|
T Consensus 93 ~~~~lGi~~~~~~~~~~------------~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~~~l~~~~g 159 (209)
T 3rle_A 93 GQGLLGVSIRFCSFDGA------------NENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLFSLIETHEA 159 (209)
T ss_dssp SSSSSCEEEEEEECTTG------------GGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHHHHHHHTTT
T ss_pred ccCccceEEeecChhHc------------cccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHHHHHHhCCC
Confidence 35689998876654221 12699999999999999999999 9999999998 9999999999988789
Q ss_pred CeEEEEEEECCC-eEEEEEEEecC
Q 012318 439 EPLKVVVQRAND-QLVTLTVIPEE 461 (466)
Q Consensus 439 ~~v~l~v~R~~g-~~~~l~v~~~~ 461 (466)
+++.|+|.|.++ +.+++++++..
T Consensus 160 ~~v~l~v~r~~~~~~~~v~l~p~~ 183 (209)
T 3rle_A 160 KPLKLYVYNTDTDNCREVIITPNS 183 (209)
T ss_dssp SCEEEEEEETTTTEEEEEEECCCT
T ss_pred CeEEEEEEECCceEEEEEEEEecC
Confidence 999999999444 56788888863
No 165
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.95 E-value=2.1e-09 Score=88.69 Aligned_cols=70 Identities=23% Similarity=0.358 Sum_probs=60.6
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVG 438 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g 438 (466)
..+||+.+..-. ....|++|..|.++|||+++||++||+|++|||+++.+ ++++.+++.. +
T Consensus 26 ~~~lG~~~~~~~---------------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~ 88 (104)
T 1wi2_A 26 GAQLGFNIRGGK---------------ASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT--A 88 (104)
T ss_dssp TCCCSEEEECCS---------------SSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH--S
T ss_pred CCCccEEEEccc---------------CCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC--C
Confidence 468999886421 12468999999999999999999999999999999999 8999988876 7
Q ss_pred CeEEEEEEE
Q 012318 439 EPLKVVVQR 447 (466)
Q Consensus 439 ~~v~l~v~R 447 (466)
+.+.|+|.|
T Consensus 89 ~~v~l~v~r 97 (104)
T 1wi2_A 89 REISMRVRF 97 (104)
T ss_dssp SSEEEEEEC
T ss_pred CEEEEEEEE
Confidence 889999998
No 166
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.94 E-value=1e-09 Score=89.27 Aligned_cols=59 Identities=25% Similarity=0.569 Sum_probs=53.2
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~~g 450 (466)
..|++|..|.++|||+++| |++||+|++|||+++.++ .++..++.. .++.+.|+|.| +|
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~g 97 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE-ADFKIELEIQT-FD 97 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH-SCSEEEEEEEE-C-
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEe-CC
Confidence 4589999999999999999 999999999999999987 788887776 78999999999 65
No 167
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.94 E-value=1.5e-09 Score=89.65 Aligned_cols=70 Identities=11% Similarity=0.213 Sum_probs=52.4
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEecC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPEE 461 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~~ 461 (466)
..|++|.+|.++|||+++| |++||+|++|||+++.+ +.++...+.. .++.+.|+|.| +++...+.+++..
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R-~~~~~~~~~~p~~ 104 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN-TSDFVYLKVAK-PTSMYISRHHHHH 104 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS-CCSEEEEEEEC-CCC----------
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEc-CCCCCCccccccC
Confidence 4699999999999999999 99999999999999976 5666666654 47899999999 7888887777654
No 168
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.93 E-value=4.4e-10 Score=91.59 Aligned_cols=61 Identities=23% Similarity=0.426 Sum_probs=54.9
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++||++||+|++|||+++.+ ++++.+++....++.+.++|.| +|+
T Consensus 32 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R-~g~ 94 (98)
T 2jxo_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDR-ETD 94 (98)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCH-HHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEEC-Cch
Confidence 358999999999999999999999999999999999 9999999987777778899988 554
No 169
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.93 E-value=2.8e-09 Score=91.00 Aligned_cols=65 Identities=26% Similarity=0.436 Sum_probs=57.7
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVI 458 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~ 458 (466)
..|++|..|.++|||+++ |++||+|++|||++|.+|+++..++.. ..|+.+.|+| | +|+ +++++.
T Consensus 24 ~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R-~g~-~~v~l~ 89 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT-D-QGT-FHLKTG 89 (125)
T ss_dssp CCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-T-TEE-EEEECC
T ss_pred CCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-E-CCE-EEEEEe
Confidence 469999999999999999 999999999999999999999998885 6789999999 9 777 444444
No 170
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.93 E-value=1.9e-09 Score=86.10 Aligned_cols=60 Identities=27% Similarity=0.318 Sum_probs=51.9
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++||++||+|++|||+++.+ +.++..++... ++.+.|+|.| +++
T Consensus 26 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R-~~~ 87 (89)
T 2q3g_A 26 NVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRAC-GERLSLGLSR-AIT 87 (89)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTC-TTEEEEEEEE-ECC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEe-CCC
Confidence 468999999999999999999999999999999984 57777767654 7889999999 553
No 171
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.93 E-value=2.9e-09 Score=86.55 Aligned_cols=60 Identities=15% Similarity=0.383 Sum_probs=53.3
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ ++++.+++. ..++.+.|+|.| +++
T Consensus 29 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~-~~g~~v~l~v~R-~~~ 91 (97)
T 1n7e_A 29 FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ-MAGETVTLKIKK-QTD 91 (97)
T ss_dssp TSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH-TCCSEEEEEEEC-CCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEe-CCC
Confidence 3689999999999999999 99999999999999975 688888887 578899999999 554
No 172
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.92 E-value=8.8e-10 Score=94.30 Aligned_cols=69 Identities=16% Similarity=0.324 Sum_probs=62.6
Q ss_pred cceeecccCCCChhhhCCC-CCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEec
Q 012318 391 SGVLVPVVTPGSPAHLAGF-LPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPE 460 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~ 460 (466)
.+++|..|.++|||+++|| ++||+|++|||+++.+ ++++.+++....|+.+.|+|.| +|+..++++++.
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R-~g~~~~~~~~~~ 104 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILR-GPEGFTTHLETT 104 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEEEEEEC-CCCSEEECCCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEe-CCceEEEEEEEE
Confidence 5899999999999999999 9999999999999999 9999999987778899999999 788777777653
No 173
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.92 E-value=1.3e-09 Score=88.97 Aligned_cols=59 Identities=22% Similarity=0.385 Sum_probs=53.2
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
.|++|..|.++|||+++||++||+|++|||+++. +++++..++. ..|+.+.|+|.| +++
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~-~~g~~v~l~v~r-~~~ 94 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLL-KSGNKISLRTTA-LEN 94 (99)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEEC-SCS
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh-cCCCEEEEEEEE-CCC
Confidence 3789999999999999999999999999999999 7889888887 578999999999 443
No 174
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.92 E-value=2.5e-09 Score=85.28 Aligned_cols=58 Identities=22% Similarity=0.496 Sum_probs=49.5
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhc-CCCCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGD-RVGEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~-~~g~~v~l~v~R~~g~ 451 (466)
.|++|..+ ++|||+ +||++||+|++|||+++.++ +++.+++.. ..|+.+.|+|.| +|+
T Consensus 27 ~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~g~ 87 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQR-QTR 87 (88)
T ss_dssp SSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEE-ECC
T ss_pred CcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEe-CCc
Confidence 58888887 999999 99999999999999999987 888888875 678999999999 553
No 175
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.92 E-value=1.6e-09 Score=89.80 Aligned_cols=79 Identities=27% Similarity=0.548 Sum_probs=62.4
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRV 437 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~ 437 (466)
...||+.+....+ ........|++|..|.++|||+++| |++||+|++|||+++.+ ++++..++.. .
T Consensus 24 ~~~lG~~~~~~~~----------~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~ 92 (108)
T 2jre_A 24 TSSLGISISGMRD----------QSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN-A 92 (108)
T ss_dssp TSCCSEEEECCCC----------CSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH-H
T ss_pred CCCcCEEEEcccC----------CCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C
Confidence 4568888764211 1111235699999999999999999 99999999999999998 6788887766 6
Q ss_pred CCeEEEEEEECCCe
Q 012318 438 GEPLKVVVQRANDQ 451 (466)
Q Consensus 438 g~~v~l~v~R~~g~ 451 (466)
++.+.|+|.| +++
T Consensus 93 g~~v~l~v~R-~~~ 105 (108)
T 2jre_A 93 GNPVRLLLIR-RLP 105 (108)
T ss_dssp CSEEEEEEEE-CCC
T ss_pred CCeEEEEEEe-CCc
Confidence 8899999999 654
No 176
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=2.2e-09 Score=86.82 Aligned_cols=60 Identities=20% Similarity=0.329 Sum_probs=51.6
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..+++|..|.++|||+++||++||+|++|||+++.++ .++..++.. .++.+.|+|.| +++
T Consensus 31 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~g~ 92 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKG-CHDHLTLSVSS-GPS 92 (94)
T ss_dssp TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHT-CCSCEEEEEEC-CSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCC
Confidence 4688999999999999999999999999999999985 566666655 67889999999 554
No 177
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.91 E-value=2.1e-09 Score=115.09 Aligned_cols=73 Identities=23% Similarity=0.275 Sum_probs=66.0
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCCC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEANP 464 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~~ 464 (466)
..|++|..|.++|||+++||++||+|++|||++| +++++.+++.. ++|++++|+|.| +|+.+++++++.+.+.
T Consensus 495 ~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~l~~~~~ 568 (597)
T 4fgm_A 495 PQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIHAFR-RDELMTLELTWQEPAK 568 (597)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEEEEE-TTEEEEEEEECCCCCC
T ss_pred CCeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEEEEE-CCEEEEEEEEecCCCC
Confidence 3589999999999999999999999999999999 58899998886 789999999999 8999999999876553
No 178
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=1.8e-09 Score=86.90 Aligned_cols=69 Identities=13% Similarity=0.280 Sum_probs=60.3
Q ss_pred ecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEec-CCHHHHHHHHhcCC
Q 012318 360 VRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV-QSITEIIEIMGDRV 437 (466)
Q Consensus 360 ~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v-~~~~~~~~~l~~~~ 437 (466)
...+||+.+.. ...+++|..|.++|||+++| |++||+|++|||+++ .+++++.+++...
T Consensus 16 ~~~~lG~~i~~------------------~~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~~- 76 (91)
T 2e7k_A 16 AGEHLGVTFRV------------------EGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRNA- 76 (91)
T ss_dssp TTCCCCEEEEE------------------SSSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHTC-
T ss_pred CCCcEeEEEEe------------------cCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHcC-
Confidence 45789998865 13689999999999999986 999999999999999 9999999999864
Q ss_pred CCeEEEEEEE
Q 012318 438 GEPLKVVVQR 447 (466)
Q Consensus 438 g~~v~l~v~R 447 (466)
++.+.|+|.|
T Consensus 77 ~~~v~l~v~~ 86 (91)
T 2e7k_A 77 SGSVILKILS 86 (91)
T ss_dssp CSSBCEEEEC
T ss_pred CCeEEEEEEE
Confidence 6788999987
No 179
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.90 E-value=1.5e-09 Score=89.76 Aligned_cols=60 Identities=30% Similarity=0.575 Sum_probs=53.0
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHH--HHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSIT--EIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~--~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++||++||+|++|||+++.++. ++..++. ..++.+.|+|.| +++
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~-~~g~~v~l~v~r-~~~ 86 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVR-KSGNSVTLLVLD-GDS 86 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHH-HTTTEEEEEEEC-HHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-hCCCEEEEEEEE-CCe
Confidence 45899999999999999999999999999999998876 8888777 468899999999 543
No 180
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.90 E-value=2.4e-09 Score=86.36 Aligned_cols=55 Identities=27% Similarity=0.443 Sum_probs=47.9
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHH--HHHHhcCCCCeEEEEEEE
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEI--IEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--~~~l~~~~g~~v~l~v~R 447 (466)
.|++|..|.++|||+++||++||+|++|||+++.++.+. ...+ +.++.++|+|.|
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~--~~g~~v~l~v~R 85 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLI--KSGAYVALTLLG 85 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHH--TSSSEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhh--cCCCEEEEEEEE
Confidence 589999999999999999999999999999999987544 3333 468999999999
No 181
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=6.1e-09 Score=85.92 Aligned_cols=58 Identities=21% Similarity=0.451 Sum_probs=52.6
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEEC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRA 448 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~ 448 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++... ++.+.|+|.|.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~ 97 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA-SPTIALLLERE 97 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC-CSCEEEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 4699999999999999999 99999999999999988 88888888764 78899999993
No 182
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.90 E-value=9.3e-10 Score=90.38 Aligned_cols=63 Identities=25% Similarity=0.539 Sum_probs=54.1
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeEE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLV 453 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~~ 453 (466)
..|++|..|.++|||+++||++||+|++|||+++.+ ++++..++.. .++.+.|+|.|.+++..
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~~~~~ 93 (102)
T 2d90_A 29 QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK-GGDQTTLLVLDKEAESI 93 (102)
T ss_dssp SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHH-STTEEEEEECSTTCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEECCCceE
Confidence 468999999999999999999999999999999998 4788887765 47899999998444433
No 183
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.89 E-value=2.6e-09 Score=84.14 Aligned_cols=57 Identities=19% Similarity=0.462 Sum_probs=50.7
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEEC
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRA 448 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~ 448 (466)
.|++|..|.++|||+++||++||+|++|||+++.++ +++.+++.. .++.++|+|.|+
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~ 81 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGK-CSGVLHMVIAEG 81 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTT-CSSCEEEEEECC
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEcC
Confidence 479999999999999999999999999999999998 888887764 356799999983
No 184
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.89 E-value=3.6e-09 Score=86.04 Aligned_cols=60 Identities=13% Similarity=0.329 Sum_probs=51.7
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeE
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQL 452 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~ 452 (466)
.|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++.+.|+|.| ++..
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R-~~~~ 92 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQ-TPQRVRLTLYR-DEAP 92 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEE-CSSC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEc-CCCC
Confidence 589999999999999999 99999999999999987 4677776665 34889999999 6653
No 185
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.89 E-value=2.2e-09 Score=84.84 Aligned_cols=59 Identities=20% Similarity=0.342 Sum_probs=50.8
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~~g 450 (466)
..|++|.+|.++|||+++||++||+|++|||+++.++ .++...+.. .++.+.|+|.| ++
T Consensus 24 ~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R-~~ 84 (85)
T 1rgw_A 24 NMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKS-ASYNLSLTLQK-SK 84 (85)
T ss_dssp TSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTT-CSSCEEEEEES-CC
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHc-CCCeEEEEEEe-CC
Confidence 3589999999999999999999999999999999987 677766654 45679999998 54
No 186
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.89 E-value=3.8e-09 Score=86.87 Aligned_cols=84 Identities=20% Similarity=0.305 Sum_probs=63.6
Q ss_pred ecccccceee-cCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcC
Q 012318 360 VRPWLGLKML-DLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDR 436 (466)
Q Consensus 360 ~~~~lG~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~ 436 (466)
.+++||+.+. ..+.+.. ...........|++|..|.++|||+++||++||+|++|||+++.+ ++++..++...
T Consensus 17 ~~~~lG~~i~g~~~~~~~----~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 92 (104)
T 3sfj_A 17 ENLILGFSIGGGIDQDPS----QNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKR 92 (104)
T ss_dssp TEEECSEEEEECTTSCGG----GCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCT
T ss_pred CCCcccEEEECccccCcc----ccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3568999887 2221110 000001134579999999999999999999999999999999966 66999988877
Q ss_pred CCCeEEEEEEE
Q 012318 437 VGEPLKVVVQR 447 (466)
Q Consensus 437 ~g~~v~l~v~R 447 (466)
.|+.+.|+|.|
T Consensus 93 ~g~~v~l~v~R 103 (104)
T 3sfj_A 93 SEEVVRLLVTR 103 (104)
T ss_dssp TCSEEEEEEEE
T ss_pred CCCEEEEEEEc
Confidence 88999999998
No 187
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.88 E-value=4.5e-09 Score=86.17 Aligned_cols=73 Identities=10% Similarity=0.251 Sum_probs=60.5
Q ss_pred ccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhh-CCCCCCCEEEEECCEec--CCHHHHHHHHhc-CC
Q 012318 362 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPV--QSITEIIEIMGD-RV 437 (466)
Q Consensus 362 ~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~-aGl~~GD~I~~ing~~v--~~~~~~~~~l~~-~~ 437 (466)
.+||+.+..-. .-....+++|.+|.++|||++ +||++||+|++|||+++ .+++++.++|.. ..
T Consensus 21 ~~lG~~i~~~~-------------~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 87 (101)
T 2yt7_A 21 EGLGVALVESG-------------WGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKS 87 (101)
T ss_dssp CCCCEEEEECC-------------CSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTT
T ss_pred CccCEEEEeCC-------------CCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 68999886310 001234789999999999999 67999999999999999 899999999987 47
Q ss_pred CCeEEEEEEE
Q 012318 438 GEPLKVVVQR 447 (466)
Q Consensus 438 g~~v~l~v~R 447 (466)
++.++|+|.|
T Consensus 88 g~~v~l~v~R 97 (101)
T 2yt7_A 88 QTSVTLSIVH 97 (101)
T ss_dssp SSEEEEEECC
T ss_pred CCeEEEEEEe
Confidence 8999999988
No 188
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=1.5e-09 Score=88.89 Aligned_cols=74 Identities=20% Similarity=0.309 Sum_probs=58.8
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhc-CCCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGE 439 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~ 439 (466)
...||+.+.... ....|++|..|.++|||+++||++||+|++|||+++.++.+.. ++.. +.++
T Consensus 20 ~~~lG~~~~~~~---------------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~-~~~~~~~~~ 83 (101)
T 1uez_A 20 HEGLGFSIRGGS---------------EHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAE-AVKALKGSK 83 (101)
T ss_dssp TTCSSEEEEECT---------------TTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHH-HHHHSSSSS
T ss_pred CCcccEEEeCCC---------------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHH-HHHhhcCCC
Confidence 456888876432 1246899999999999999999999999999999999998744 3332 5567
Q ss_pred eEEEEEEECCCe
Q 012318 440 PLKVVVQRANDQ 451 (466)
Q Consensus 440 ~v~l~v~R~~g~ 451 (466)
.+.|+|.| +|+
T Consensus 84 ~v~l~v~R-~g~ 94 (101)
T 1uez_A 84 KLVLSVYS-AGR 94 (101)
T ss_dssp SCCEEECC-CCC
T ss_pred eEEEEEEE-CCc
Confidence 89999999 654
No 189
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.88 E-value=4.5e-09 Score=85.26 Aligned_cols=78 Identities=24% Similarity=0.371 Sum_probs=59.8
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVG 438 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g 438 (466)
..-+||.+..+....... .....|++|..|.++|||+++||++||+|++|||+++.+ ++++.+++... +
T Consensus 15 ~~~~Gf~l~~~g~~~~~~--------~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~ 85 (96)
T 2ego_A 15 NQTFGFEIQTYGLHHREE--------QRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKAS-G 85 (96)
T ss_dssp TCCCSEEEEEEEC---------------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT-T
T ss_pred CCCccEEEEeccccccCC--------CCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-C
Confidence 347888876532111000 023468999999999999999999999999999999999 68999988776 5
Q ss_pred CeEEEEEEE
Q 012318 439 EPLKVVVQR 447 (466)
Q Consensus 439 ~~v~l~v~R 447 (466)
+.+.|+|.|
T Consensus 86 ~~v~l~v~~ 94 (96)
T 2ego_A 86 NVLRLETLY 94 (96)
T ss_dssp TEEEEEEEC
T ss_pred CeEEEEEEE
Confidence 589999987
No 190
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.87 E-value=7e-10 Score=95.10 Aligned_cols=68 Identities=21% Similarity=0.384 Sum_probs=56.4
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHH--HHHHHhcCCCCeEEEEEEECCCeEEEEEEEecC
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITE--IIEIMGDRVGEPLKVVVQRANDQLVTLTVIPEE 461 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~--~~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~~ 461 (466)
.|++|..|.++|||+++||++||+|++|||+++.++.+ +.+.+ +.++.+.|+|.| +|+..++++++.+
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~--~~~~~v~l~v~R-~g~~~~~~v~~~~ 115 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLL--KSSRHLILTVKD-VGRLPHARTTVDE 115 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHH--TTCSEEEEEEEC-CSCCSSCSCCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHH--hcCCeEEEEEEE-CCccccccccccc
Confidence 58999999999999999999999999999999999644 44434 346789999999 8887777666654
No 191
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.87 E-value=7.6e-10 Score=93.25 Aligned_cols=61 Identities=21% Similarity=0.458 Sum_probs=55.2
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC---CHHHHHHHHhcCCCCeEEEEEEECCCeE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ---SITEIIEIMGDRVGEPLKVVVQRANDQL 452 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~---~~~~~~~~l~~~~g~~v~l~v~R~~g~~ 452 (466)
..|++|..|.++|||+++| |++||+|++|||+++. ++.++..++.. .++.+.|+|.| +++.
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~R-~~~~ 112 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK-AKDTVQLVIAR-GSLP 112 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH-CCSEEEEEEES-SCCG
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCEEEEEEEe-CCcc
Confidence 4699999999999999999 9999999999999998 89999888876 68899999999 6653
No 192
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.87 E-value=7.5e-09 Score=88.03 Aligned_cols=60 Identities=20% Similarity=0.370 Sum_probs=54.3
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcC-CCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDR-VGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~-~g~~v~l~v~R~~g 450 (466)
..|++|..|.++|||+++| |++||+|++|||+++. +++++.++|... .++.+.|+|.| ++
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~ 106 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCR-GY 106 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEE-SC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe-CC
Confidence 4689999999999999999 9999999999999998 678999988874 48999999999 54
No 193
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.87 E-value=5.9e-09 Score=85.46 Aligned_cols=80 Identities=20% Similarity=0.373 Sum_probs=62.1
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRV 437 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~ 437 (466)
...||+.+..-. +..+.....|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .
T Consensus 14 ~~glG~~i~~g~----------~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~ 82 (102)
T 2i1n_A 14 NSGLGFSIAGGI----------DNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE-A 82 (102)
T ss_dssp TTBTSEEEEECT----------TSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-S
T ss_pred CCcCCEEEEccc----------CCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C
Confidence 356888876411 11111235699999999999999999 99999999999999977 7777777765 6
Q ss_pred CCeEEEEEEECCCeE
Q 012318 438 GEPLKVVVQRANDQL 452 (466)
Q Consensus 438 g~~v~l~v~R~~g~~ 452 (466)
++.+.|+|.| +++.
T Consensus 83 g~~v~l~v~R-~~~~ 96 (102)
T 2i1n_A 83 GPVVRLVVRR-RQPP 96 (102)
T ss_dssp CSEEEEEEEE-ECCC
T ss_pred CCeEEEEEEe-CCCC
Confidence 7899999999 5553
No 194
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.87 E-value=2.5e-10 Score=95.85 Aligned_cols=66 Identities=27% Similarity=0.492 Sum_probs=56.5
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEECCCeEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQLVTLTV 457 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v 457 (466)
..|++|..|.++|||+++||++||+|++|||+++.++ +++.+++.. .|+.+.|+|.| +++..++.+
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~~~~~~~~~ 104 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK-SGNSVTLLVLD-GDSYEKAVK 104 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHH-TCSEEEEEEEC-HHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEE-CCcceehhh
Confidence 4689999999999999999999999999999999884 888888875 48999999999 666544433
No 195
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.87 E-value=4.6e-09 Score=83.07 Aligned_cols=58 Identities=17% Similarity=0.353 Sum_probs=51.4
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhc-CCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGD-RVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~g~~v~l~v~R 447 (466)
..|++|..|.++|||+++| |++||+|++|||+++. +++++.+++.. ..|+.+.|+|.|
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 4689999999999999999 9999999999999998 46888888877 448889999876
No 196
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.86 E-value=4e-09 Score=87.83 Aligned_cols=58 Identities=16% Similarity=0.260 Sum_probs=51.8
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEEC
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRA 448 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~ 448 (466)
.+++|..|.++|||+++||++||+|++|||+++. +++++.+++....++.++|+|.|.
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~ 103 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSL 103 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEEC
Confidence 4688999999999999999999999999999999 669999888776666799999983
No 197
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.86 E-value=5.9e-09 Score=84.31 Aligned_cols=60 Identities=20% Similarity=0.357 Sum_probs=50.8
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++...+.. .++.+.|+|.| +++
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~~~ 90 (95)
T 2vwr_A 28 EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQA-SGERVNLTIAR-PGK 90 (95)
T ss_dssp SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEE-ESC
T ss_pred CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEc-CCc
Confidence 3589999999999999999 99999999999999977 4555555553 58899999999 543
No 198
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.86 E-value=5.8e-09 Score=85.36 Aligned_cols=78 Identities=18% Similarity=0.415 Sum_probs=60.2
Q ss_pred ccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEecCCH--HHHHHHHhcCCC
Q 012318 362 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVG 438 (466)
Q Consensus 362 ~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g 438 (466)
..||+.+..-. +..+.....|++|..|.++|||+++| |++||+|++|||+++.++ .++..++.. .+
T Consensus 18 ~~lG~~l~~g~----------~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g 86 (101)
T 2jik_A 18 SGLGFNIVGGT----------DQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN-AG 86 (101)
T ss_dssp TCCCEEEEECT----------TSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHT-CC
T ss_pred CCCCEEEeccc----------cCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CC
Confidence 67888876411 11111234699999999999999999 999999999999999885 677766665 47
Q ss_pred CeEEEEEEECCCe
Q 012318 439 EPLKVVVQRANDQ 451 (466)
Q Consensus 439 ~~v~l~v~R~~g~ 451 (466)
+.+.|+|.| +++
T Consensus 87 ~~v~l~v~R-~~~ 98 (101)
T 2jik_A 87 YAVSLRVQH-RLE 98 (101)
T ss_dssp SEEEEEEEE-ESC
T ss_pred CeEEEEEEe-CCC
Confidence 889999999 543
No 199
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.86 E-value=4.5e-09 Score=85.60 Aligned_cols=56 Identities=16% Similarity=0.291 Sum_probs=51.1
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
.|++|.+|.++|||+++| |++||+|++|||+++.+ ++++.+++... ++.++|+|.+
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~-~~~v~L~V~~ 94 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET-KGMISLKVIP 94 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC-CEEEEEEEEC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE
Confidence 689999999999999999 99999999999999995 99999988864 5688888886
No 200
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.85 E-value=5.6e-09 Score=83.82 Aligned_cols=59 Identities=27% Similarity=0.391 Sum_probs=50.9
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
.|++|..|.++|||+++||++||+|++|||+++.+ +.++..++.. .++.+.|+|.| ++.
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R-~~~ 84 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRS-CPSEIILLVWR-MVP 84 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEE-CC-
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCC
Confidence 47899999999999999999999999999999995 5788877765 46689999999 554
No 201
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.85 E-value=5.9e-09 Score=86.28 Aligned_cols=59 Identities=14% Similarity=0.283 Sum_probs=51.3
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g 450 (466)
..|++|.+|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++.+.|+|.| ++
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R-~~ 92 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKN-TSDFVYLKVAK-PG 92 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHS-CCSEEEEEEEC-CS
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC-CCCeEEEEEEe-CC
Confidence 4589999999999999999 99999999999999955 6777777765 56799999999 44
No 202
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=98.85 E-value=2.7e-09 Score=112.33 Aligned_cols=187 Identities=17% Similarity=0.131 Sum_probs=102.3
Q ss_pred HhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCC-----CcEEEEEEEEec
Q 012318 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-----GRTFEGTVLNAD 207 (466)
Q Consensus 133 ~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~-----g~~~~a~vv~~d 207 (466)
.-.|..|.|.. .+...|.|.+|+++ ||||+|||+.+... ...+.|.+.. ++.+..+-+..|
T Consensus 233 ~~~Pw~v~l~~--------~~~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~V~~G~~~~~~~~~~~v~~i~~H 298 (509)
T 2odp_A 233 ERTPWHVTIKP--------KSQETCRGALISDQ-WVLTAAHCFRDGND-----HSLWRVNVGDPKSQWGKEFLIEKAVIS 298 (509)
T ss_dssp HHCTTEEEEEC------------CEEEEECSSS-EEEECGGGC-------------CEEEECCTTCTTCEEECEEEEEEC
T ss_pred CCCCcEEEEEe--------CCCcEEEEEEEcCC-EEEEcHHHcCCCCC-----cceEEEEeCCcccCCCceeeeEEEEEC
Confidence 34577777753 12357999999988 99999999975210 1234555432 344555544444
Q ss_pred C----------------CCCEEEEEeCCCC----CCCccccCCCC------CCCCCCEEEEEecCCCCCCc---------
Q 012318 208 F----------------HSDIAIVKINSKT----PLPAAKLGTSS------KLCPGDWVVAMGCPHSLQNT--------- 252 (466)
Q Consensus 208 ~----------------~~DlAlLkv~~~~----~~~~~~l~~s~------~~~~G~~V~~iG~p~~~~~~--------- 252 (466)
+ .+|||||+|+.+. .+.|+.|.... ....|..+.+.||.......
T Consensus 299 p~y~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~ 378 (509)
T 2odp_A 299 PGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALN 378 (509)
T ss_dssp TTCCTTTTGGGTCCCCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTT
T ss_pred CCCccccccccccccccCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeeccc
Confidence 3 3699999999763 34566665321 13456666666654221111
Q ss_pred ---eEEeEEeeeecCccCC-------CCC-------CccccEEEEc----ccCCCCCccceeecCC-C--eEEEEEEeEe
Q 012318 253 ---VTAGIVSCVDRKSSDL-------GLG-------GMRREYLQTD----CAINAGNSGGPLVNID-G--EIVGINIMKV 308 (466)
Q Consensus 253 ---~t~G~Vs~~~~~~~~~-------~~~-------~~~~~~i~~~----~~i~~G~SGGPlvd~~-G--~VVGI~~~~~ 308 (466)
+..-.+..+....|.. .+. ......++.. ...|.|+|||||+-.. | .++||++++.
T Consensus 379 ~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~ 458 (509)
T 2odp_A 379 GSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGL 458 (509)
T ss_dssp SCEEEEEEECTHHHHHHHHGGGGCTTTCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEES
T ss_pred CceeeEEEecCccHHHHHHHhhcccccccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcC
Confidence 1111111011111110 010 1122345543 3579999999999432 3 4999999986
Q ss_pred c-CCC--------------ee----eEEEeHHHHHHHHHHHHHc
Q 012318 309 A-AAD--------------GL----SFAVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 309 ~-~~~--------------g~----~~aip~~~i~~~l~~l~~~ 333 (466)
. ... +. +++.-+....+|+++..+.
T Consensus 459 ~~~C~~~~~~~~~~~~~~Pg~~y~~~vyt~V~~~~~WI~~~~~~ 502 (509)
T 2odp_A 459 YNPCLGSADKNSRKRAPRSKVPPPRDFHINLFRMQPWLRQHLGD 502 (509)
T ss_dssp CCTTC-----CCCCCCCTTCSSCCCEEEEEGGGCHHHHHHHHTT
T ss_pred CCCCCCcccccccccCcccCCCCCCceeeeHHHHhHHHHHHhCC
Confidence 3 121 11 4667788899999887754
No 203
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.85 E-value=8.8e-09 Score=83.00 Aligned_cols=59 Identities=12% Similarity=0.266 Sum_probs=50.7
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g 450 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++.+.|+|.| +|
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R-~g 93 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN-TSDMVYLKVAK-PG 93 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT-CCSEEEEEEEC-CC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEc-CC
Confidence 4699999999999999999 99999999999999988 4677666654 35689999998 54
No 204
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.85 E-value=4.4e-09 Score=84.95 Aligned_cols=60 Identities=27% Similarity=0.560 Sum_probs=51.7
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
.|++|..|.++|||+++||++||+|++|||+++.++ +++..++.. .+..+.+.+.|.+++
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK-GGDQTTLLVLDKELE 90 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHT-TTTEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEECCccc
Confidence 489999999999999999999999999999999998 899988877 566778888884443
No 205
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.84 E-value=6.5e-09 Score=84.16 Aligned_cols=59 Identities=19% Similarity=0.451 Sum_probs=52.6
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~~g 450 (466)
..|++|..|.++|||+++| |++||+|++|||+++. ++.++..++.. .++.+.|+|.| ++
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~~ 93 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN-TGQVVHLLLEK-GQ 93 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEEC-CS
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEc-CC
Confidence 4699999999999999999 9999999999999999 56888877765 67899999998 54
No 206
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.84 E-value=1.1e-08 Score=82.62 Aligned_cols=70 Identities=11% Similarity=0.249 Sum_probs=55.7
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecC--CHHHHHHHHhcCCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVG 438 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g 438 (466)
...+|+.+..+++ ....|++|.+|.++|||+++||++||+|++|||++|. +++++.+++.+
T Consensus 19 ~~~~Gf~v~~~~~--------------~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~--- 81 (94)
T 3kzd_A 19 ADTYGFSLSSVEE--------------DGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ--- 81 (94)
T ss_dssp --CCSEEEEEECS--------------SSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS---
T ss_pred cCCcCEEEEecCC--------------CCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC---
Confidence 3478998876542 1235899999999999999999999999999999998 47899888864
Q ss_pred CeEEEEEEE
Q 012318 439 EPLKVVVQR 447 (466)
Q Consensus 439 ~~v~l~v~R 447 (466)
..++++|..
T Consensus 82 ~~l~ltV~~ 90 (94)
T 3kzd_A 82 PSLGLLVRT 90 (94)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 457777654
No 207
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.83 E-value=4.3e-09 Score=89.43 Aligned_cols=61 Identities=20% Similarity=0.361 Sum_probs=55.1
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcC-CCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDR-VGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~-~g~~v~l~v~R~~g~ 451 (466)
..+++|.+|.++|||+++| |++||+|++|||+++.+ ++++.++|... +++.+.|+|.| +++
T Consensus 44 ~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~~ 108 (122)
T 1v5q_A 44 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEF-DVA 108 (122)
T ss_dssp SSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEE-ECC
T ss_pred CCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEE-CCc
Confidence 3578999999999999999 99999999999999988 99999999874 48899999999 654
No 208
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.83 E-value=6.5e-09 Score=88.22 Aligned_cols=60 Identities=17% Similarity=0.363 Sum_probs=53.8
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhc-CCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGD-RVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~g~~v~l~v~R~~g 450 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ ++++.+++.. ..|+.++|+|.| +|
T Consensus 57 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~g 120 (121)
T 2kom_A 57 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFR-QE 120 (121)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEE-CC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEe-CC
Confidence 3689999999999999999 99999999999999988 5888888876 458899999999 55
No 209
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.83 E-value=5.1e-09 Score=86.64 Aligned_cols=61 Identities=16% Similarity=0.348 Sum_probs=52.8
Q ss_pred CCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhc-CCCCeEEEEEEECCCe
Q 012318 389 VKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQ 451 (466)
Q Consensus 389 ~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~~g~ 451 (466)
...|++|..|.++|||+ +||++||+|++|||+++.++.++..++.. ..++.+.|+|.| +++
T Consensus 37 ~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R-~~~ 98 (107)
T 2h2b_A 37 GETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRR-KKG 98 (107)
T ss_dssp CCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEE-ESC
T ss_pred CCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEE-CCC
Confidence 35699999999999999 99999999999999999999777665443 578899999999 554
No 210
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.83 E-value=7e-09 Score=88.90 Aligned_cols=80 Identities=24% Similarity=0.437 Sum_probs=65.3
Q ss_pred ecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcC
Q 012318 360 VRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDR 436 (466)
Q Consensus 360 ~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~ 436 (466)
....||+.+..... ........|++|..|.++|||+++| |++||+|++|||+++.+ ++++.+++..
T Consensus 25 ~~~~lG~~i~~~~~----------~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~- 93 (129)
T 2dmz_A 25 DGQSLGIRIVGYVG----------TSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN- 93 (129)
T ss_dssp TTCCCCEEEEEECC----------CSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH-
T ss_pred CCCCcCEEEEeecC----------CcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 35678998765321 0111235799999999999999999 99999999999999999 8999998887
Q ss_pred CCCeEEEEEEECCCe
Q 012318 437 VGEPLKVVVQRANDQ 451 (466)
Q Consensus 437 ~g~~v~l~v~R~~g~ 451 (466)
.++.+.|+|.| +++
T Consensus 94 ~~~~v~l~v~R-~~~ 107 (129)
T 2dmz_A 94 AGQVVHLTLVR-RKT 107 (129)
T ss_dssp CCSSEEEEEEE-ESS
T ss_pred CCCeEEEEEEe-CCc
Confidence 78899999999 554
No 211
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=3.7e-09 Score=86.97 Aligned_cols=60 Identities=23% Similarity=0.386 Sum_probs=53.1
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCC-CCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRV-GEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~-g~~v~l~v~R~~g 450 (466)
..+++|..|.++|||+++| |++||+|++|||++|.+ ++++.++|.... ++.++|+|.| ++
T Consensus 33 ~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~ 96 (103)
T 1uep_A 33 GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRR-KV 96 (103)
T ss_dssp TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEE-EC
T ss_pred CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEe-CC
Confidence 4689999999999999999 99999999999999955 788888887643 7899999999 44
No 212
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=1e-09 Score=91.41 Aligned_cols=70 Identities=17% Similarity=0.408 Sum_probs=58.4
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEecC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPEE 461 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~~ 461 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++.+.|+|.| +++..++.+++..
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R-~~~~~~~~v~~~~ 107 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRH-GGKKMRFLVAK-SDVETAKKIHSGP 107 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHT-CCSEEEEEEEC-CCHHHHHHHSSCS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCcceeEEEEecC
Confidence 4689999999999999999 99999999999999974 6666666655 48899999999 7776666665543
No 213
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.81 E-value=8.9e-09 Score=85.76 Aligned_cols=61 Identities=16% Similarity=0.373 Sum_probs=54.2
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhc-CCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGD-RVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ ++++.+++.. ..++.+.|+|.| +++
T Consensus 38 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~~ 102 (111)
T 2koj_A 38 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFR-QEE 102 (111)
T ss_dssp SSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEE-CCC
T ss_pred CcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe-CCC
Confidence 3689999999999999999 99999999999999966 5888888876 468999999999 554
No 214
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=8.9e-09 Score=86.85 Aligned_cols=61 Identities=18% Similarity=0.299 Sum_probs=53.3
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEECCCeE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQL 452 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~~g~~ 452 (466)
..|++|..|.++|||+++| |++||+|++|||+++. ++.++..++... +.+++|+|.| +|+.
T Consensus 52 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R-~g~~ 115 (117)
T 2fne_A 52 DLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT-KGTVTLMVLS-SDET 115 (117)
T ss_dssp EEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-CSSEEEEEEE-CSCE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEe-CCcc
Confidence 3589999999999999999 9999999999999999 788888888764 4569999999 6653
No 215
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.80 E-value=6.1e-09 Score=86.50 Aligned_cols=61 Identities=13% Similarity=0.374 Sum_probs=54.0
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcC--CCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDR--VGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~--~g~~v~l~v~R~~g~ 451 (466)
..|++|.+|.++|||+++| |++||+|++|||+++.+ ++++.++|... .+..++|+|.| .++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R-~~~ 97 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAK-SGG 97 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEEC-CCC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEe-CCC
Confidence 4799999999999999999 99999999999999998 89999988764 45569999999 544
No 216
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.80 E-value=8.5e-09 Score=82.60 Aligned_cols=60 Identities=25% Similarity=0.470 Sum_probs=49.0
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
.|++|..|.++|||+++||++||+|++|||+++.+ +.++..++....++.+.+.+.| +++
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r-~~~ 88 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP-ETD 88 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECC-CCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcC-Ccc
Confidence 68999999999999999999999999999999988 6788888876555544444445 443
No 217
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.80 E-value=1e-08 Score=86.13 Aligned_cols=60 Identities=17% Similarity=0.338 Sum_probs=52.6
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeE
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQL 452 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~ 452 (466)
.|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++... ++.+.|+|.| +++.
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R-~~~~ 105 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQT-PQKVRLVVYR-DEAH 105 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTC-CSEEEEEEEC-CSSC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEe-CCcc
Confidence 589999999999999999 99999999999999988 67888777653 4889999999 5553
No 218
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.79 E-value=1.4e-09 Score=91.27 Aligned_cols=82 Identities=16% Similarity=0.274 Sum_probs=62.6
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHH--HHHHHhcCCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITE--IIEIMGDRVG 438 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~--~~~~l~~~~g 438 (466)
..-||+.+.... +...|++|..|.++|||+++||++||+|++|||+++.++.+ +..++.. +
T Consensus 26 ~~~lG~~l~~~~---------------~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~--~ 88 (114)
T 1x5n_A 26 SRGLGCSISSGP---------------IQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKS--S 88 (114)
T ss_dssp SCCCCEEEEECC---------------SSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHH--C
T ss_pred CCceeEEEeecC---------------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc--C
Confidence 345788876432 22468999999999999999999999999999999999854 6666654 3
Q ss_pred CeEEEEEEECC-CeEEEEEEEec
Q 012318 439 EPLKVVVQRAN-DQLVTLTVIPE 460 (466)
Q Consensus 439 ~~v~l~v~R~~-g~~~~l~v~~~ 460 (466)
+.+.|+|.| + |+.+++.+.+.
T Consensus 89 ~~v~l~v~r-~~g~~~~~~~~~~ 110 (114)
T 1x5n_A 89 RSLTISIVA-AAGRELFMTDRSG 110 (114)
T ss_dssp SSEEEEECS-STTTHHHHSSCCC
T ss_pred CeEEEEEEc-CCCCceEEEeccC
Confidence 579999999 5 66555544443
No 219
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.79 E-value=1.3e-08 Score=85.14 Aligned_cols=60 Identities=18% Similarity=0.419 Sum_probs=53.0
Q ss_pred CcceeecccCCCChhhhCCC-CCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAGF-LPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++|| ++||+|++|||++|. +++++.+++.... +++.|+|.| +++
T Consensus 47 ~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r-~~~ 109 (113)
T 1va8_A 47 MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH-GTLTFVLIP-SSG 109 (113)
T ss_dssp SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-EEEEEEEEC-CCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEE-CCc
Confidence 36899999999999999999 999999999999999 6889998887643 579999999 654
No 220
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.79 E-value=5.5e-09 Score=97.29 Aligned_cols=73 Identities=23% Similarity=0.384 Sum_probs=60.2
Q ss_pred CCCcceeecccCCCChhhhCCCCCC-CEEEEECCEecCCHHHHHHHHh-cCCCCeEEEEEEECC-CeEEEEEEEec
Q 012318 388 NVKSGVLVPVVTPGSPAHLAGFLPS-DVVIKFDGKPVQSITEIIEIMG-DRVGEPLKVVVQRAN-DQLVTLTVIPE 460 (466)
Q Consensus 388 ~~~~g~~V~~V~~~spA~~aGl~~G-D~I~~ing~~v~~~~~~~~~l~-~~~g~~v~l~v~R~~-g~~~~l~v~~~ 460 (466)
....|++|.+|.++|||++|||++| |+|++|||++|.+|.++...+. ..+|++++|+|.|.+ ++.+++++.+.
T Consensus 13 ~~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~ 88 (209)
T 3rle_A 13 GGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPS 88 (209)
T ss_dssp SSSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEEECCC
T ss_pred CCCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEEEccc
Confidence 3457999999999999999999999 9999999999999988776554 477899999999932 35566666543
No 221
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.79 E-value=5.4e-09 Score=85.08 Aligned_cols=58 Identities=24% Similarity=0.394 Sum_probs=51.4
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEec--CCHHHHHHHHhc--CCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPV--QSITEIIEIMGD--RVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v--~~~~~~~~~l~~--~~g~~v~l~v~R 447 (466)
..+.+|.+|.++|||++|||++||+|++|||++| .+|+++..++.. +.|+.+.|.|..
T Consensus 38 ~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~~ 99 (101)
T 3qik_A 38 NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVAT 99 (101)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEec
Confidence 3578899999999999999999999999999997 499999998876 578888888763
No 222
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.78 E-value=7.8e-09 Score=86.16 Aligned_cols=59 Identities=27% Similarity=0.570 Sum_probs=51.9
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
.|++|..|.++|||+++| |++||+|++|||+++.+ ++++.+++.. .++.+.|+|.| ++.
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~~~ 99 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRN-CGNSVRMLVAR-DPA 99 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHH-HCSEEEEEEEE-SCT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEe-CCC
Confidence 689999999999999999 99999999999999984 5788877765 47889999999 443
No 223
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.78 E-value=1e-08 Score=85.15 Aligned_cols=57 Identities=23% Similarity=0.353 Sum_probs=51.7
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|..|.++|||+++||++||+|++|||+++.++ +++.+++... ++.+.|+|.|
T Consensus 44 ~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~~ 102 (109)
T 1q3o_A 44 PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQG-GNTLMVKVVM 102 (109)
T ss_dssp CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT-TTEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEE
Confidence 3489999999999999999999999999999999999 8888877764 7789999988
No 224
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.78 E-value=5.1e-09 Score=87.52 Aligned_cols=57 Identities=23% Similarity=0.411 Sum_probs=52.6
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEE
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R 447 (466)
.+++|..|.++|||+++||++||+|++|||++|. +++++.+++....++.+.|+|.|
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~ 94 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVS 94 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEe
Confidence 4788999999999999999999999999999999 99999998887667789999987
No 225
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.78 E-value=7.7e-10 Score=94.73 Aligned_cols=68 Identities=24% Similarity=0.408 Sum_probs=59.0
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeEEE--EEEEe
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLVT--LTVIP 459 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~~~--l~v~~ 459 (466)
.|++|..|.++|||+++||++||+|++|||+++.+ ++++..++....++.+.++|.| +|+..+ +++++
T Consensus 33 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R-~g~~~~~~~~l~~ 104 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDR-ETDEFFKKCRVIP 104 (128)
T ss_dssp CSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECH-HHHHHHHHHTCCC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEe-CCcceEEEEEEEe
Confidence 58999999999999999999999999999999999 9999999987777888899999 666544 44443
No 226
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.78 E-value=2.9e-09 Score=89.10 Aligned_cols=69 Identities=20% Similarity=0.328 Sum_probs=57.4
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEec
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPE 460 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~ 460 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++.+.|+|.| +++..++++.+.
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~~~~~~~~v~p~ 105 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN-TKGRVRFMIGR-ERPGEQSEVAQL 105 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHH-SCSSCEEEEEE-CCCCTTSSCSSC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEe-CCCCCcchhhhh
Confidence 4699999999999999999 99999999999999985 6666666665 47889999999 776655555543
No 227
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.78 E-value=7.4e-09 Score=88.43 Aligned_cols=58 Identities=19% Similarity=0.355 Sum_probs=53.8
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhc-CCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGD-RVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~g~~v~l~v~R 447 (466)
..+++|..|.++|||+++| |++||+|++|||++|. +++++.++|.. .+|+.++|+|.|
T Consensus 48 ~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R 109 (126)
T 1wif_A 48 GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYR 109 (126)
T ss_dssp TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEES
T ss_pred CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEE
Confidence 3578999999999999999 9999999999999995 89999999987 679999999999
No 228
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=6.4e-09 Score=85.55 Aligned_cols=60 Identities=22% Similarity=0.357 Sum_probs=52.4
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..+++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++.+.|+|.| +++
T Consensus 37 ~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~g~ 99 (104)
T 2djt_A 37 DTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA-GGPQLHLVIRR-PLS 99 (104)
T ss_dssp ECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH-TCSEEEEEECC-CCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE-CCC
Confidence 4689999999999999999 99999999999999988 5677776665 68899999999 554
No 229
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.78 E-value=9.1e-09 Score=84.16 Aligned_cols=56 Identities=29% Similarity=0.430 Sum_probs=49.8
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
.+++|..|.++|||+++||++||+|++|||+++.+ +.++.+++... ++.+.|+|.|
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R 93 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC-PSEIILLVWR 93 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHC-SSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE
Confidence 57899999999999999999999999999999995 58888887764 4569999999
No 230
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.78 E-value=4e-09 Score=89.13 Aligned_cols=63 Identities=19% Similarity=0.253 Sum_probs=54.8
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEECCCeEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQLV 453 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~~g~~~ 453 (466)
..|++|..|.++|||+++| |++||+|++|||+++. ++.++..++....+..+.+++.| +++.+
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R-~~~~~ 106 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTR-KLTPE 106 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEE-CCCSS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEc-CCCcc
Confidence 4689999999999999999 9999999999999998 58888888877667777788999 66543
No 231
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.78 E-value=1.8e-09 Score=92.66 Aligned_cols=82 Identities=21% Similarity=0.344 Sum_probs=62.2
Q ss_pred ccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEec--CCHHHHHHHHhcCCC
Q 012318 362 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDRVG 438 (466)
Q Consensus 362 ~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v--~~~~~~~~~l~~~~g 438 (466)
..||+.+....+.....++. ....|++|..|.++|||+++| |++||+|++|||+++ .+++++..++.. .+
T Consensus 42 ~~lG~~i~~~~~~~~~~~g~------~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~ 114 (128)
T 1nf3_C 42 KPLGFYIRDGSSVRVTPHGL------EKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIA-NS 114 (128)
T ss_dssp SCCCEEEEEEEEEEEETTEE------EEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHH-TT
T ss_pred CCccEEEEcccccccccccc------CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CC
Confidence 56899876543211111110 113589999999999999999 999999999999999 778999988875 45
Q ss_pred CeEEEEEEECCCe
Q 012318 439 EPLKVVVQRANDQ 451 (466)
Q Consensus 439 ~~v~l~v~R~~g~ 451 (466)
+.+.|+|.| +++
T Consensus 115 ~~v~l~v~r-~~~ 126 (128)
T 1nf3_C 115 RNLIITVRP-ANQ 126 (128)
T ss_dssp TSEEEEEEC-CCC
T ss_pred CeEEEEEEE-CCc
Confidence 679999999 554
No 232
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.77 E-value=1.4e-08 Score=82.37 Aligned_cols=57 Identities=14% Similarity=0.329 Sum_probs=47.5
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEEC
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRA 448 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~ 448 (466)
.|++|.+|.++|||+++| |++||+|++|||+++.+. .+...++. ..++++.|+|.|.
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~-~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFK-GANGKVSMEVTRP 90 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHH-TCSSEEEEEEECC
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHh-cCCCcEEEEEEeC
Confidence 689999999999999999 999999999999999863 34444444 4567899999983
No 233
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=1e-08 Score=86.45 Aligned_cols=60 Identities=15% Similarity=0.292 Sum_probs=53.5
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++| |++||+|++|||+++. +++++..++.. .++.++|+|.| +++
T Consensus 53 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~~~ 115 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN-TSEVVYLKVGK-PTT 115 (117)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEE-EEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCc
Confidence 4689999999999999999 9999999999999999 78888888875 47899999999 543
No 234
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.77 E-value=8.9e-09 Score=82.48 Aligned_cols=57 Identities=23% Similarity=0.533 Sum_probs=48.7
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHH--HHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITE--IIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~--~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|..|.++|||+++||++||+|++|||+++.++.+ +..++. ..++.+.|+|.|
T Consensus 31 ~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R 89 (91)
T 1m5z_A 31 EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIA-ESGNKLDLVISR 89 (91)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH-TSTTEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCEEEEEEEe
Confidence 368999999999999999999999999999999999743 334444 458889999998
No 235
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.77 E-value=7.9e-09 Score=82.61 Aligned_cols=58 Identities=21% Similarity=0.380 Sum_probs=50.9
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEec--CCHHHHHHHHhcC-CCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDR-VGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v--~~~~~~~~~l~~~-~g~~v~l~v~R 447 (466)
..+++|..|.++|||+++| |++||+|++|||+++ .++.++..++... .+..++|+|.|
T Consensus 26 ~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R 87 (90)
T 2q9v_A 26 GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQ 87 (90)
T ss_dssp TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe
Confidence 3579999999999999999 999999999999999 5688888888763 34589999998
No 236
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.77 E-value=1.7e-08 Score=84.77 Aligned_cols=73 Identities=12% Similarity=0.255 Sum_probs=59.0
Q ss_pred eecccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEec--CCHHHHHHHHhc
Q 012318 359 VVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGD 435 (466)
Q Consensus 359 ~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v--~~~~~~~~~l~~ 435 (466)
...+.+|+.+..-. ....+++|..|.++|||+++| |++||+|++|||+++ .+++++.+++..
T Consensus 33 ~~~~~lG~~l~~~~---------------~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 97 (114)
T 2gzv_A 33 DAQNLIGISIGGGA---------------QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQE 97 (114)
T ss_dssp CTTSCCSEEEEECC---------------C--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCCCcEeEEEEeCC---------------CCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34567999876421 113579999999999999999 999999999999999 889999988876
Q ss_pred CCCCeEEEEEEE
Q 012318 436 RVGEPLKVVVQR 447 (466)
Q Consensus 436 ~~g~~v~l~v~R 447 (466)
.. +.+.|+|.+
T Consensus 98 ~~-~~v~l~v~~ 108 (114)
T 2gzv_A 98 VK-GEVTIHYNK 108 (114)
T ss_dssp CC-SEEEEEEEC
T ss_pred CC-CeEEEEEEe
Confidence 43 458888876
No 237
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.76 E-value=2e-08 Score=80.56 Aligned_cols=57 Identities=19% Similarity=0.370 Sum_probs=49.4
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|.+|.++|||+++| |++||+|++|||+++.+. .++..++.. .++.+.|+|.|
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R 87 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKC-SLGTVTLEVGR 87 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEc
Confidence 3689999999999999999 999999999999999764 566666654 57789999999
No 238
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.75 E-value=1.6e-08 Score=84.54 Aligned_cols=60 Identities=17% Similarity=0.404 Sum_probs=51.7
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++.+.|+|.| ++.
T Consensus 48 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~~~ 110 (112)
T 2r4h_A 48 NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN-GGRRVRLFLKR-GET 110 (112)
T ss_dssp TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TTTEEEEEEEC-CEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCc
Confidence 4689999999999999999 99999999999999976 4666666665 67889999999 554
No 239
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.75 E-value=4.8e-09 Score=89.61 Aligned_cols=60 Identities=27% Similarity=0.485 Sum_probs=54.2
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++||++||+|++|||++|. +++++.++|... ++.+.|+|.| +++
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r-~~~ 121 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNS-DTTLELSVMP-KDS 121 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHTC-TTEEEEECCC-CCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEE-CCC
Confidence 36799999999999999999999999999999998 899999988764 8899999999 543
No 240
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.74 E-value=9.1e-09 Score=86.74 Aligned_cols=59 Identities=20% Similarity=0.411 Sum_probs=53.4
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEec--CCHHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v--~~~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
.+++|..|.++|||+++| |++||+|++|||+++ .+++++.++|.. .++.++|+|.| +++
T Consensus 42 ~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r-~~~ 103 (117)
T 1v62_A 42 SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS-ISEKVRLEILP-VPQ 103 (117)
T ss_dssp CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS-CSSEEEEEECC-BTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEE-CCC
Confidence 359999999999999999 999999999999999 779999999884 78999999999 544
No 241
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=1.2e-08 Score=83.38 Aligned_cols=59 Identities=20% Similarity=0.359 Sum_probs=50.8
Q ss_pred cceeecccCCCChhhhC-CCCCCCEEEEECCEecCCH-HHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQSI-TEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~a-Gl~~GD~I~~ing~~v~~~-~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
.+++|.+|.++|||+++ ||++||+|++|||+++.++ .++..++.. .++.+.|+|.| +++
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~~~~~~~~~~~-~~~~v~l~v~R-~~~ 95 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGSRQEALILIKG-SFRILKLIVRR-RNS 95 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSCSHHHHHHHHT-CCSSCEEEEEE-CCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccchHHHHHHHHHh-CCCeEEEEEEe-CCC
Confidence 57899999999999999 9999999999999999885 566666655 46889999999 554
No 242
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=9.2e-09 Score=84.36 Aligned_cols=60 Identities=20% Similarity=0.379 Sum_probs=51.7
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++. ..++.+.|+|.| +++
T Consensus 35 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R-~~~ 97 (103)
T 1wfv_A 35 KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIK-SGGRRVRLLLKR-GTG 97 (103)
T ss_dssp TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHH-HHCSEECEEEEC-TTC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEE-CCC
Confidence 3589999999999999999 99999999999999987 466666666 467889999999 554
No 243
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.73 E-value=2.8e-08 Score=102.76 Aligned_cols=72 Identities=25% Similarity=0.405 Sum_probs=65.5
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEecCCC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPEEAN 463 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 463 (466)
..|++|.+|.++|||+++||++||+|++|||+++.+++++.+++..+. +.+.|+|.| +|+.+++.+.+..+.
T Consensus 362 ~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~l~~~~-~~v~l~v~R-~g~~~~~~~~~~~~~ 433 (436)
T 4a8c_A 362 GKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKP-AIIALQIVR-GNESIYLLMRLEHHH 433 (436)
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhCC-CeEEEEEEE-CCEEEEEEEEecccC
Confidence 369999999999999999999999999999999999999999998744 489999999 899999999887654
No 244
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=1e-08 Score=85.92 Aligned_cols=59 Identities=17% Similarity=0.353 Sum_probs=53.6
Q ss_pred cceeecccCCCChhhh-CCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~-aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
.+++|..|.++|||++ +||++||+|++|||+++.+ ++++.++|.. .++.+.|+|.| +++
T Consensus 43 ~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r-~~~ 104 (114)
T 1uew_A 43 VPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD-AGLSVTLRIIP-QEE 104 (114)
T ss_dssp CSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH-TTTEEEEEECC-CSC
T ss_pred cCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCc
Confidence 3679999999999999 9999999999999999998 6999998886 78999999999 554
No 245
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.73 E-value=1.8e-08 Score=83.13 Aligned_cols=60 Identities=22% Similarity=0.398 Sum_probs=52.4
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++.+.|+|.| +++
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~~~ 99 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR-TSSVVTLEVAK-QGA 99 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEC-CCS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCc
Confidence 4699999999999999999 99999999999999984 6777776655 68899999999 554
No 246
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.73 E-value=1.4e-08 Score=82.05 Aligned_cols=78 Identities=21% Similarity=0.330 Sum_probs=59.7
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEecCCH--HHHHHHHhcCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRV 437 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~~~ 437 (466)
...||+.+...... .. ....|++|..|.++|||+++| |++||+|++|||+++.++ .++..++.. .
T Consensus 14 ~~~lG~~i~~~~~~----------~~-~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~ 81 (97)
T 2iwn_A 14 VQGLGITIAGYIGD----------KK-LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH-T 81 (97)
T ss_dssp TTBSCEEEECCCCC---------------CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT-C
T ss_pred CCCCcEEEEccCCC----------CC-CCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C
Confidence 45688887643210 00 124689999999999999999 999999999999999865 566666665 7
Q ss_pred CCeEEEEEEECCCe
Q 012318 438 GEPLKVVVQRANDQ 451 (466)
Q Consensus 438 g~~v~l~v~R~~g~ 451 (466)
++.+.|+|.| +|+
T Consensus 82 ~~~v~l~v~r-~g~ 94 (97)
T 2iwn_A 82 GQTVLLTLMR-RGE 94 (97)
T ss_dssp CSEEEEEEEE-EEE
T ss_pred CCeEEEEEEe-CCC
Confidence 8899999999 543
No 247
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.73 E-value=3.1e-08 Score=79.98 Aligned_cols=77 Identities=21% Similarity=0.374 Sum_probs=57.9
Q ss_pred ccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCC
Q 012318 362 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGE 439 (466)
Q Consensus 362 ~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~ 439 (466)
+.|||.+..-. ...+..+.....|++|..|.++|||++ ||++||+|++|||+++.+ +.++..++. ..++
T Consensus 13 ~~lG~~i~gg~-------~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~-~~~~ 83 (95)
T 1mfg_A 13 PELGFSISGGV-------GGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLK-TFQN 83 (95)
T ss_dssp SSCSEEEEECB-------TSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHH-HCCS
T ss_pred CCCCEEEeCCc-------CccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhh-cCCC
Confidence 46888875311 001122323457999999999999999 999999999999999987 556666555 4688
Q ss_pred eEEEEEEE
Q 012318 440 PLKVVVQR 447 (466)
Q Consensus 440 ~v~l~v~R 447 (466)
.+.|+|.|
T Consensus 84 ~v~l~v~R 91 (95)
T 1mfg_A 84 TVELIIVR 91 (95)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 99999999
No 248
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.73 E-value=2.7e-08 Score=84.07 Aligned_cols=78 Identities=19% Similarity=0.420 Sum_probs=60.6
Q ss_pred ccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEecCCH--HHHHHHHhcCCC
Q 012318 362 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVG 438 (466)
Q Consensus 362 ~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g 438 (466)
..|||.+..-.+ ..+.....|++|..|.++|||+++| |++||+|++|||++|.++ .++..++.. .+
T Consensus 28 ~~lG~~i~~~~~----------~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~-~g 96 (120)
T 2eno_A 28 SGLGFNIVGGTD----------QQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN-AG 96 (120)
T ss_dssp SSCSEEEECCTT----------TCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH-HC
T ss_pred CCCCEEEecccC----------CccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CC
Confidence 688988764211 1111235699999999999999999 999999999999999885 477776665 37
Q ss_pred CeEEEEEEECCCe
Q 012318 439 EPLKVVVQRANDQ 451 (466)
Q Consensus 439 ~~v~l~v~R~~g~ 451 (466)
+.+.|+|.| ++.
T Consensus 97 ~~v~l~v~R-~~~ 108 (120)
T 2eno_A 97 YAVSLRVQH-RLQ 108 (120)
T ss_dssp SEEEEEEEE-EEE
T ss_pred CeEEEEEEe-CCc
Confidence 889999999 544
No 249
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=1e-08 Score=86.45 Aligned_cols=60 Identities=20% Similarity=0.428 Sum_probs=53.1
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++.+.|+|.| +++
T Consensus 48 ~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R-~~~ 110 (117)
T 1ujd_A 48 EIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQ-QSGEAEICVRL-DLN 110 (117)
T ss_dssp CEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSC-CSSCEEEEEES-SCC
T ss_pred CcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc-CCCEEEEEEEE-CCc
Confidence 3589999999999999999 99999999999999976 6888887776 67889999999 554
No 250
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=1.3e-08 Score=84.26 Aligned_cols=81 Identities=19% Similarity=0.342 Sum_probs=62.1
Q ss_pred ccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcCCC
Q 012318 362 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVG 438 (466)
Q Consensus 362 ~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g 438 (466)
..||+.+..+++. + +........|++|..|.++|||+++| |++||+|++|||+++. ++.++..++.. .+
T Consensus 20 ~~lG~~i~~~~~~-----g--g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g 91 (108)
T 1q7x_A 20 NSLGISVTVLFDK-----G--GVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN-TG 91 (108)
T ss_dssp CSCCEEESSSSSS-----B--CBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHH-TT
T ss_pred CCccEEEEEeccC-----C--CccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CC
Confidence 5788887643211 0 00111224699999999999999999 9999999999999998 67788777765 47
Q ss_pred CeEEEEEEECCCe
Q 012318 439 EPLKVVVQRANDQ 451 (466)
Q Consensus 439 ~~v~l~v~R~~g~ 451 (466)
+.+.|+|.| ++.
T Consensus 92 ~~v~l~v~R-~~~ 103 (108)
T 1q7x_A 92 QVVHLLLEK-GQS 103 (108)
T ss_dssp SEEEEEEEC-CCC
T ss_pred CeEEEEEEe-CCc
Confidence 899999999 554
No 251
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.72 E-value=2e-08 Score=83.00 Aligned_cols=56 Identities=21% Similarity=0.344 Sum_probs=50.7
Q ss_pred ceeecccCCCChhhhCCCCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEEC
Q 012318 392 GVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRA 448 (466)
Q Consensus 392 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~ 448 (466)
+++|..|.++|||+++||++||+|++|||+++. +++++..++.. .++.+.|+|.|.
T Consensus 44 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~ 101 (107)
T 3qe1_A 44 LQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRA-GEKELILTVLSV 101 (107)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH-CSSEEEEEEECS
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEcC
Confidence 456999999999999999999999999999999 78999988875 588999999993
No 252
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.71 E-value=1e-06 Score=82.09 Aligned_cols=174 Identities=17% Similarity=0.234 Sum_probs=112.3
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEE----EEEecCC
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGT----VLNADFH 209 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~----vv~~d~~ 209 (466)
++..|++++-..+. ....--|+.+. .+|+|++|..+.. ++.++|....|.-.-.. .+..-+.
T Consensus 14 ia~~iC~l~n~sdg-----~~~~l~gigyG--~~iItn~HLf~rn-------ng~L~I~s~hG~f~v~nt~~lki~~i~g 79 (241)
T 3mmg_A 14 ISACVCLLENSSDG-----HSERLFGIGFG--PYIIANQHLFRRN-------NGELTIKTMHGEFAVANSTQLQMKPVEG 79 (241)
T ss_dssp HHTTEEEEEEEETT-----EEEEEEEEEET--TEEEECGGGGSST-------TCEEEEEETTEEEEEEEGGGSCEEECTB
T ss_pred hhheEEEEEEEeCC-----CEEEEEEEeEC--CEEEEChhhcccC-------CCeEEEEECCceEEccCCCceeeEEeCC
Confidence 45678888754322 11223455554 4999999999864 26788888877432111 3455678
Q ss_pred CCEEEEEeCCCCCCCccccCC-CCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCC
Q 012318 210 SDIAIVKINSKTPLPAAKLGT-SSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGN 288 (466)
Q Consensus 210 ~DlAlLkv~~~~~~~~~~l~~-s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~ 288 (466)
.||.+||++. ++||.+-.. -..++.++.|+++|..+..... ...|+........ ....++.+...+..|+
T Consensus 80 ~DiiiIrmPk--DfpPf~~kl~FR~P~~~E~V~lVg~~fq~k~~--~s~vSesS~i~p~-----~~~~fWkHwIsT~~G~ 150 (241)
T 3mmg_A 80 RDIIVIKMAK--DFPPFPQKLKFRQPTIKDRVCMVSTNFQQKSV--SSLVSESSHIVHK-----EDTSFWQHWITTKDGQ 150 (241)
T ss_dssp SSCEEEECCT--TSCCCCSCCCBCCCCTTCCEEEEEEEECSSCE--EEEEEEEECCEEC-----TTSSEEEECBCCCTTC
T ss_pred ccEEEEeCCC--CCCCcchhcccCCCCCCCeEEEEEeecccCCc--cEEECCcceeEEc-----CCCCEEEEEcCCCCCc
Confidence 9999999975 445444322 2467899999999976543322 2223333222111 1135889999999999
Q ss_pred ccceeecC-CCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHHHHc
Q 012318 289 SGGPLVNI-DGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKKN 333 (466)
Q Consensus 289 SGGPlvd~-~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l~~~ 333 (466)
-|+||++. ||.+||+++..... ...+|+.|+.. ++.++++++
T Consensus 151 CGlPlVs~~Dg~IVGiHsl~~~~-~~~N~F~~f~~--~f~~~~L~~ 193 (241)
T 3mmg_A 151 AGSPLVSIIDGNILGIHSLTHTT-NGSNYFVEFPE--KFVATYLDA 193 (241)
T ss_dssp TTCEEEETTTCCEEEEEEEEETT-TCCEEEEECCT--THHHHHTTC
T ss_pred CCCeEEEcCCCcEEEEEecccCC-CCcEEEEcCCH--HHHHHHhhC
Confidence 99999987 69999999997754 34688887643 344444433
No 253
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.71 E-value=6.9e-09 Score=87.93 Aligned_cols=61 Identities=10% Similarity=0.265 Sum_probs=52.1
Q ss_pred CcceeecccCCCChhhhC-CCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeE
Q 012318 390 KSGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQL 452 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~a-Gl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~ 452 (466)
..|++|..|.++|||+++ ||++||+|++|||+++.+ +.++..++... +++++|+|.| +++.
T Consensus 52 ~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~-~~~v~l~v~r-~g~~ 115 (120)
T 2iwo_A 52 DVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNA-SGSIEMQVVA-GGDV 115 (120)
T ss_dssp EEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHC-CSEEEEEEEC-CTTS
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE-CCcc
Confidence 358999999999999999 999999999999999987 56777767654 6679999999 6654
No 254
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.70 E-value=2e-08 Score=86.40 Aligned_cols=58 Identities=26% Similarity=0.484 Sum_probs=52.8
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhc-CCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGD-RVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~g~~v~l~v~R 447 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ ++++.++|.. ..++.+.|+|.|
T Consensus 64 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 125 (131)
T 1wfg_A 64 RLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSR 125 (131)
T ss_dssp CEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEc
Confidence 3589999999999999999 99999999999999975 6899998887 478999999999
No 255
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.70 E-value=1.4e-08 Score=84.52 Aligned_cols=59 Identities=19% Similarity=0.328 Sum_probs=53.6
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCC---CCeEEEEEEECCC
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRV---GEPLKVVVQRAND 450 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~---g~~v~l~v~R~~g 450 (466)
.+++|..|.+++||+++| |++||+|++|||+++.+ ++++.++|+... +..++|++.| ++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R-~~ 105 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIR-SG 105 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEEC-CC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEe-CC
Confidence 479999999999999999 99999999999999987 889999998755 8899999999 54
No 256
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.70 E-value=2.2e-08 Score=85.92 Aligned_cols=60 Identities=17% Similarity=0.314 Sum_probs=53.4
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcC-CCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDR-VGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~-~g~~v~l~v~R~~g 450 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++.++|... .|+.++|+|.| ++
T Consensus 42 ~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~ 105 (129)
T 2kpk_A 42 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR-GY 105 (129)
T ss_dssp TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEE-CS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe-CC
Confidence 3579999999999999999 99999999999999984 68998888874 48899999999 54
No 257
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.70 E-value=2.4e-08 Score=80.40 Aligned_cols=57 Identities=23% Similarity=0.420 Sum_probs=51.9
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEec--CCHHHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v--~~~~~~~~~l~~~~g~~v~l~v~R 447 (466)
..+++|..|.++|||+++| |++||+|++|||+++ .+++++.+++....+ .+.|+|.|
T Consensus 27 ~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~~ 86 (93)
T 3o46_A 27 TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQG-AITFKIIP 86 (93)
T ss_dssp TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCE-EEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-eEEEEEEe
Confidence 4689999999999999999 999999999999999 889999999877544 89999988
No 258
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.69 E-value=4.6e-08 Score=89.31 Aligned_cols=60 Identities=17% Similarity=0.331 Sum_probs=50.9
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCCHHHHHHHH-hcCCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSITEIIEIM-GDRVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~l-~~~~g~~v~l~v~R~~g 450 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+|.+..... ....++.+.|+|.| ++
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r-~~ 95 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR-RK 95 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEE-EC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEe-cC
Confidence 5699999999999999999 9999999999999999886654432 23468899999999 54
No 259
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.69 E-value=2.3e-08 Score=85.56 Aligned_cols=59 Identities=24% Similarity=0.421 Sum_probs=53.7
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC---CHHHHHHHHhcCCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ---SITEIIEIMGDRVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~---~~~~~~~~l~~~~g~~v~l~v~R~~g 450 (466)
..|++|..|.++|||+++| |++||+|++|||+++. +++++..++.. .++.+.|+|.| +.
T Consensus 53 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~r-~~ 115 (128)
T 2db5_A 53 KVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ-TTGSLRLIVAR-EP 115 (128)
T ss_dssp CEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH-CCSEEEEEEEE-CC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCeEEEEEEc-CC
Confidence 3589999999999999999 9999999999999998 88999888876 67899999999 44
No 260
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.69 E-value=1.7e-08 Score=84.79 Aligned_cols=68 Identities=12% Similarity=0.239 Sum_probs=56.3
Q ss_pred cccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCe
Q 012318 363 WLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEP 440 (466)
Q Consensus 363 ~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~ 440 (466)
.+|+.+..+++. ...|++|..|.++|||+++||++||+|++|||++|.+ ++++.+++.. ..
T Consensus 30 ~~G~~v~~~~~~--------------~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~---~~ 92 (114)
T 2d8i_A 30 TYGFSLSSVEED--------------GIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---PS 92 (114)
T ss_dssp CCCCEEEEEEET--------------TEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS---SE
T ss_pred ccCEEEEecCcC--------------CcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC---Cc
Confidence 479988754321 1258999999999999999999999999999999988 5788887764 37
Q ss_pred EEEEEEE
Q 012318 441 LKVVVQR 447 (466)
Q Consensus 441 v~l~v~R 447 (466)
+.|+|.|
T Consensus 93 v~l~v~R 99 (114)
T 2d8i_A 93 LGLLVRT 99 (114)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999999
No 261
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=3.1e-08 Score=80.41 Aligned_cols=58 Identities=21% Similarity=0.433 Sum_probs=50.4
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcC-CCCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDR-VGEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~-~g~~v~l~v~R~~g~ 451 (466)
.|++|..|.+ +|+++||++||+|++|||+++.+ ++++.++|... .++.+.|+|.| +++
T Consensus 32 ~Gv~V~~v~~--~a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~g~ 92 (96)
T 1ujv_A 32 TGQRVKQILD--IQGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHR-GSG 92 (96)
T ss_dssp TEEEEEEESC--GGGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEEC-CSS
T ss_pred CCEEEEEEec--ccccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEE-CCC
Confidence 4889999988 47899999999999999999986 48999988875 48999999999 554
No 262
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=2.4e-08 Score=80.12 Aligned_cols=53 Identities=15% Similarity=0.288 Sum_probs=48.4
Q ss_pred eecccCCCChhhhCCCCCCCEEEEECCEec--CCHHHHHHHHhcCCCCeEEEEEEE
Q 012318 394 LVPVVTPGSPAHLAGFLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 394 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v--~~~~~~~~~l~~~~g~~v~l~v~R 447 (466)
+|.+|.++|||+++||++||+|++|||+++ .+++++.+++.. .++.+.|+|.+
T Consensus 34 ~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~p 88 (90)
T 1y7n_A 34 IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSN-AVGEIHMKTMP 88 (90)
T ss_dssp EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHH-CCEEEEEEEEC
T ss_pred EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE
Confidence 799999999999999999999999999999 579999998875 47889999886
No 263
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.68 E-value=3.7e-08 Score=83.14 Aligned_cols=57 Identities=18% Similarity=0.323 Sum_probs=52.3
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|..|.++|||+++| |++||+|++|||+++. +++++..++.. .++.++|+|.|
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~L~v~R 111 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKR-TSSSIVLKALE 111 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHS-CCSEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE
Confidence 4689999999999999999 9999999999999999 88899888876 47789999998
No 264
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.68 E-value=2.5e-07 Score=79.20 Aligned_cols=96 Identities=20% Similarity=0.255 Sum_probs=64.7
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEEE
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVLN 205 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~---------~g~~~~a~vv~ 205 (466)
.|..|.|.... +...|.|.+|+++ +|||+|||+.+. ...|.+. .++.+..+-+.
T Consensus 12 ~Pw~v~l~~~~-------~~~~CgGsLIs~~-~VLTAAHC~~~~---------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 74 (131)
T 1yph_C 12 WPWQVSLQDKT-------GFHFCGGSLINEN-WVVTAAHCGVTT---------SDVVVAGEFDQGSSSEKIQKLKIAKVF 74 (131)
T ss_dssp STTEEEEECTT-------SCEEEEEEEEETT-EEEECGGGCCCT---------TSEEEESCSBTTCSSSCCEEEEEEEEE
T ss_pred cCcEEEEEeCC-------CCEEEEEEEeeCC-EEEECHHHCCCC---------CeEEEEeEccCCCCCCceEEEEEEEEE
Confidence 46678776421 2367999999988 999999998651 1223321 12345555555
Q ss_pred ecC-------CCCEEEEEeCCCC----CCCccccCCCC-CCCCCCEEEEEecCC
Q 012318 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPH 247 (466)
Q Consensus 206 ~d~-------~~DlAlLkv~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~ 247 (466)
.++ .+|||||+|+.+. .+.|+.|.... .+..|+.+++.||..
T Consensus 75 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG~ 128 (131)
T 1yph_C 75 KNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGL 128 (131)
T ss_dssp ECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred eCCCCCCCCCCCCEEEEEECCcccCCCcCcceECCCcccCCCCCCEEEEEcCCc
Confidence 543 4699999999763 35677775533 356899999999974
No 265
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=2.5e-08 Score=80.93 Aligned_cols=57 Identities=23% Similarity=0.507 Sum_probs=49.3
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEEC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRA 448 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~ 448 (466)
..+++|..|.++|||+ +||++||+|++|||++|.+ +.++..++.. .++.+.|+|.|+
T Consensus 30 ~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 88 (96)
T 2edv_A 30 SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILRE-AEDSLSITVVRC 88 (96)
T ss_dssp SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHH-CSSCEEEEEEEC
T ss_pred CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 3589999999999996 9999999999999999977 6666666665 688999999993
No 266
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.68 E-value=4.4e-08 Score=80.39 Aligned_cols=78 Identities=21% Similarity=0.368 Sum_probs=58.5
Q ss_pred cccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCC
Q 012318 361 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVG 438 (466)
Q Consensus 361 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g 438 (466)
.+.||+.+..-. ...+..+.....|++|..|.++|||++ ||++||+|++|||+++.+ +.++..++. ..+
T Consensus 20 ~~~lG~~i~gg~-------~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~-~~g 90 (103)
T 1n7t_A 20 DPELGFSISGGV-------GGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLK-TFQ 90 (103)
T ss_dssp SSCCCBEEEECT-------TSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHH-HCC
T ss_pred CCCccEEEEccc-------CCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhh-cCC
Confidence 347888875311 001112223457999999999999999 999999999999999987 566666665 457
Q ss_pred CeEEEEEEE
Q 012318 439 EPLKVVVQR 447 (466)
Q Consensus 439 ~~v~l~v~R 447 (466)
+.+.|+|.|
T Consensus 91 ~~v~l~v~R 99 (103)
T 1n7t_A 91 NTVELIIVR 99 (103)
T ss_dssp SEEEEEEEC
T ss_pred CeEEEEEEe
Confidence 899999998
No 267
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.67 E-value=8.3e-09 Score=87.86 Aligned_cols=68 Identities=18% Similarity=0.298 Sum_probs=53.9
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeE-EEEEEEe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQL-VTLTVIP 459 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~-~~l~v~~ 459 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++... ++.+.|+|.| +++. ..+.++|
T Consensus 50 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~-~~~v~l~v~R-~~~~~~~~~~~P 121 (124)
T 2daz_A 50 RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTA-PSKVKLVFIR-NEDAVNQMASGP 121 (124)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHS-CSEEEEEEEE-CTTHHHHBCCCC
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEe-CCCcccccccCC
Confidence 3699999999999999999 99999999999999966 66666666553 5689999999 5543 2344443
No 268
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.67 E-value=2e-08 Score=83.27 Aligned_cols=58 Identities=16% Similarity=0.287 Sum_probs=52.7
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ ++++..++....+..+.|+|.|
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R 103 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICS 103 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEc
Confidence 4689999999999999999 99999999999999965 8899998887666789999998
No 269
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.66 E-value=4.9e-08 Score=77.97 Aligned_cols=57 Identities=18% Similarity=0.356 Sum_probs=49.3
Q ss_pred CcceeecccCCCChhhhC-CCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~a-Gl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|..|.++|||+++ ||++||+|++|||+++.+ +.++..++.. .++.+.|+|.|
T Consensus 29 ~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~~v~l~v~r 88 (90)
T 1qav_A 29 KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKK-TGKEVVLEVKY 88 (90)
T ss_dssp TEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEE
Confidence 368999999999999999 999999999999999986 5666666654 47789999988
No 270
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.66 E-value=7.2e-08 Score=82.05 Aligned_cols=60 Identities=13% Similarity=0.295 Sum_probs=51.9
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~~g 450 (466)
..+++|..|.++|||+++| |++||+|++|||+++. +++++..++... +..+.|+|.|.++
T Consensus 44 ~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~~~ 106 (125)
T 3hpk_A 44 CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV-KGEVTIHYNKLQA 106 (125)
T ss_dssp CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHS-CSEEEEEEEEECS
T ss_pred CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECCC
Confidence 3589999999999999999 9999999999999998 688888888774 4459999988433
No 271
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.65 E-value=7.7e-08 Score=79.50 Aligned_cols=58 Identities=24% Similarity=0.438 Sum_probs=50.4
Q ss_pred CCcceeecccCCCChhhhC-CCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 389 VKSGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 389 ~~~g~~V~~V~~~spA~~a-Gl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
...|++|..|.++|||+++ ||++||+|++|||+++.+ +.++..++.. .++.+.|+|.|
T Consensus 39 ~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R 99 (107)
T 1uhp_A 39 SSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKT-AKEPIVVQVLR 99 (107)
T ss_dssp CSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHH-CCSSEEEEEEE
T ss_pred CCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCcEEEEEEe
Confidence 3569999999999999999 999999999999999976 5666666665 57789999999
No 272
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.65 E-value=2.8e-08 Score=82.20 Aligned_cols=57 Identities=14% Similarity=0.333 Sum_probs=47.5
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEEC
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRA 448 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~ 448 (466)
.|++|.+|.++|||+++| |++||+|++|||+++.+. .+...++. ..++++.|+|.|.
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~-~~~~~v~l~v~R~ 84 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFK-GANGKVSMEVTRP 84 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHH-SCBSCEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHh-CCCCeEEEEEEeC
Confidence 689999999999999999 999999999999999863 34444444 4556799999993
No 273
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.64 E-value=3.7e-08 Score=81.23 Aligned_cols=59 Identities=27% Similarity=0.441 Sum_probs=50.2
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRAN 449 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~ 449 (466)
..|++|..|.++|||+++||++||+|++|||+++.+ +.++...+.. .++.+.++|.|.+
T Consensus 31 ~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~~ 91 (106)
T 2eei_A 31 KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKK-SGSRVMFLLVDKE 91 (106)
T ss_dssp CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHH-HCSEEEEEECCTT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEcCc
Confidence 368999999999999999999999999999999985 4677766654 4678999999843
No 274
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.64 E-value=3.6e-08 Score=79.19 Aligned_cols=57 Identities=23% Similarity=0.412 Sum_probs=49.6
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ ++++..++... ++.+.|+|.|
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~r 88 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAA-QGSVKLVVRS 88 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHC-CSEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCcEEEEEEe
Confidence 4689999999999999996 99999999999999985 67877777653 4679999998
No 275
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.64 E-value=3.8e-08 Score=80.77 Aligned_cols=56 Identities=18% Similarity=0.489 Sum_probs=48.3
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
.|++|..|.++|||+++| |++||+|++|||+++.+ +.++...+.. .++.+.|+|.|
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r 93 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN-AGQTVTIIAQY 93 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT-SCSEEEEEEEE
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE
Confidence 489999999999999999 99999999999999955 4555555554 67889999999
No 276
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.63 E-value=3.7e-08 Score=78.57 Aligned_cols=56 Identities=25% Similarity=0.391 Sum_probs=50.3
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEec--CCHHHHHHHHhcCCCCeEEEEEEE
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v--~~~~~~~~~l~~~~g~~v~l~v~R 447 (466)
.|++|.+|.++|||+++| |++||+|++|||+++ .+++++.++++.. +.++.|++.+
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~-~~~v~L~v~~ 79 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKS-RGKLQLVVLR 79 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHT-TTEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEeC
Confidence 489999999999999999 999999999999999 7889999988874 4578888876
No 277
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=4.9e-08 Score=80.72 Aligned_cols=57 Identities=23% Similarity=0.397 Sum_probs=50.5
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++.+.|+|.|
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R 98 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRN-TKGNVRFVIGR 98 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHH-CCSEEEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEe
Confidence 5699999999999999999 99999999999999985 6666666665 47899999999
No 278
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.63 E-value=5.4e-08 Score=89.30 Aligned_cols=59 Identities=17% Similarity=0.389 Sum_probs=54.3
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++||++||+|++|||++|.+ ++++..++.. |+.+.|+|.| +|+
T Consensus 109 ~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~--~~~v~l~v~r-~g~ 169 (192)
T 3k1r_A 109 GCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT--EKTVSIKVRH-IGL 169 (192)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS--SSEEEEEEEE-CCE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC--CCeEEEEEEE-CCc
Confidence 358999999999999999999999999999999998 8999888876 8899999999 666
No 279
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=1.7e-08 Score=85.14 Aligned_cols=60 Identities=23% Similarity=0.424 Sum_probs=50.6
Q ss_pred cceeecccCCCChhhhC--CCCCCCEEEEECCEecCC--HHHHHHHHhcCC---CCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHLA--GFLPSDVVIKFDGKPVQS--ITEIIEIMGDRV---GEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~a--Gl~~GD~I~~ing~~v~~--~~~~~~~l~~~~---g~~v~l~v~R~~g~ 451 (466)
.|++|..|.++|||+++ ||++||+|++|||+++.+ +.++..++.... +..+.|+|.| +..
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R-~~~ 107 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP-NAV 107 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEEC-CCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEc-ccc
Confidence 58999999999999999 999999999999999976 567777776532 3579999999 544
No 280
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.62 E-value=4e-08 Score=89.72 Aligned_cols=61 Identities=11% Similarity=0.254 Sum_probs=54.8
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCCeE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQL 452 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g~~ 452 (466)
..|++|..|.++|||+++| |++||+|++|||++|.+ ++++.+++.. .++.+.|+|.| ++..
T Consensus 129 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R-~~~~ 192 (196)
T 3gsl_A 129 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKN-TYDVVYLKVAK-PSNA 192 (196)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHS-CCEEEEEEEEE-ESCC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHc-CCCeEEEEEeC-CCCc
Confidence 4689999999999999999 99999999999999999 9999998865 57889999999 5544
No 281
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.62 E-value=5.3e-08 Score=101.04 Aligned_cols=66 Identities=29% Similarity=0.349 Sum_probs=60.6
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQLVTLTV 457 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v 457 (466)
..|++|.+|.++|||+++||++||+|++|||++|.+++++.+++.. .++.+.|+|.| +|+.+.+.+
T Consensus 385 ~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~~~l~~-~~~~v~l~v~R-~g~~~~v~l 450 (451)
T 3pv2_A 385 VIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQE-KKKELLVQVLR-GPGSMYLLV 450 (451)
T ss_dssp EEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHTTS-SCSCEEEEEEE-TTEEEEEEE
T ss_pred CCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHhc-CCCeEEEEEEE-CCEEEEEEe
Confidence 3689999999999999999999999999999999999999998877 67889999999 888877765
No 282
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.61 E-value=1e-07 Score=97.00 Aligned_cols=71 Identities=24% Similarity=0.442 Sum_probs=62.6
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEECCCe---EEEEEEEecC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQ---LVTLTVIPEE 461 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~~g~---~~~l~v~~~~ 461 (466)
..+++|..|.++|||+++||++||+|++|||+++.++ +++..++....|+.++|+|.| +|+ .++++++...
T Consensus 98 ~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r-~g~~~~~~~~~l~r~~ 173 (388)
T 1fc6_A 98 GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHA-PGAPSNTRTLQLTRQK 173 (388)
T ss_dssp SSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEE-TTEEEEEEEEEEECBC
T ss_pred CCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEe-CCCCcceEEEEEEEce
Confidence 3689999999999999999999999999999999997 788888877789999999999 666 6777777654
No 283
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.61 E-value=6.2e-08 Score=83.45 Aligned_cols=57 Identities=23% Similarity=0.309 Sum_probs=50.9
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|..|.++|||+++||++||+|++|||++|.+ ++++..++.. .++.+.|+|.|
T Consensus 64 ~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~~ 122 (132)
T 3l4f_D 64 PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ-GGNTLMVKVVM 122 (132)
T ss_dssp CCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHHH-TTTEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEE
Confidence 348999999999999999999999999999999984 6777777766 67889999998
No 284
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.61 E-value=1.4e-08 Score=84.55 Aligned_cols=79 Identities=16% Similarity=0.274 Sum_probs=61.0
Q ss_pred ccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcCCC
Q 012318 362 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVG 438 (466)
Q Consensus 362 ~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g 438 (466)
.-|||.+..-.+. ..+..+.....|++|..|.++|||+++| |++||+|++|||+++. ++.++..++.. .+
T Consensus 21 ~~lG~~i~gg~~~------~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~g 93 (111)
T 1uju_A 21 ERLGISIRGGARG------HAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRS-VG 93 (111)
T ss_dssp CCCCEEEECCSSS------SCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSS-CS
T ss_pred CccCEEEECCccc------cccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CC
Confidence 4678877643210 0011122345699999999999999999 9999999999999999 68888887765 67
Q ss_pred CeEEEEEEE
Q 012318 439 EPLKVVVQR 447 (466)
Q Consensus 439 ~~v~l~v~R 447 (466)
+.+.|+|.|
T Consensus 94 ~~v~l~v~r 102 (111)
T 1uju_A 94 DTLTVLVCD 102 (111)
T ss_dssp SEEEECCCC
T ss_pred CeEEEEEEE
Confidence 889999998
No 285
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.61 E-value=7.6e-08 Score=88.42 Aligned_cols=61 Identities=20% Similarity=0.367 Sum_probs=55.0
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcC-CCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDR-VGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~-~g~~v~l~v~R~~g~ 451 (466)
..+++|..|.++|||+++| |++||+|++|||+++. +|+++..++... +|+.++|+|.| +++
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~~ 99 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEF-DVA 99 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEE-CSC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe-cCC
Confidence 4579999999999999999 9999999999999999 689999988874 48899999999 663
No 286
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.59 E-value=8.4e-08 Score=76.02 Aligned_cols=57 Identities=19% Similarity=0.390 Sum_probs=48.3
Q ss_pred CcceeecccCCCChhhh-CCCCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~-aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R 447 (466)
..+++|..|.++|||++ +||++||+|++|||+++. ++.++..++.. .++.+.|+|.+
T Consensus 27 ~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~~ 86 (87)
T 4e34_A 27 GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ-QRGEIEFEVVY 86 (87)
T ss_dssp TEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE
Confidence 35799999999999999 799999999999999995 55778777764 56678888764
No 287
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.59 E-value=3e-08 Score=84.80 Aligned_cols=60 Identities=18% Similarity=0.370 Sum_probs=52.8
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcC------CCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDR------VGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~------~g~~v~l~v~R~~g 450 (466)
..|++|..|.+++||+++| |++||+|++|||+++.+ ++++.++|... +++.++|+|.| ++
T Consensus 54 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R-~~ 122 (127)
T 1wg6_A 54 DLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILR-RS 122 (127)
T ss_dssp EEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEE-CS
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEe-CC
Confidence 3589999999999999999 99999999999999987 66888888753 57899999999 54
No 288
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.59 E-value=3.8e-08 Score=82.97 Aligned_cols=57 Identities=18% Similarity=0.459 Sum_probs=48.5
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCCHHHHHHHH-hcCCCCeEEEEEEE
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSITEIIEIM-GDRVGEPLKVVVQR 447 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~l-~~~~g~~v~l~v~R 447 (466)
.|++|..|.++|||+++| |++||+|++|||+++.++.+..... ....++.+.|+|.|
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 96 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY 96 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 689999999999999999 9999999999999999885443322 23468899999999
No 289
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.59 E-value=2.3e-08 Score=84.34 Aligned_cols=61 Identities=23% Similarity=0.343 Sum_probs=52.1
Q ss_pred cceeecccCCCChhhhC-CCCCCCEEEEECCEecCC--HHHHHHHHhcC---CCCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQS--ITEIIEIMGDR---VGEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~a-Gl~~GD~I~~ing~~v~~--~~~~~~~l~~~---~g~~v~l~v~R~~g~ 451 (466)
..++|..|.++|||+++ ||++||+|++|||+++.+ ++++.++|... .|+.++|+|.|...+
T Consensus 43 ~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~~~~ 109 (118)
T 1v6b_A 43 GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCPPK 109 (118)
T ss_dssp CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECCCSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeCCcc
Confidence 34899999999999999 999999999999999987 77888877642 488999999994333
No 290
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.59 E-value=3.8e-08 Score=90.69 Aligned_cols=59 Identities=20% Similarity=0.247 Sum_probs=52.4
Q ss_pred CcceeecccCCCChhhhC-CCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~a-Gl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~~g 450 (466)
..|++|..|.++|||+++ ||++||+|++|||+++.++ .++..++.. .++.+.|+|.| ++
T Consensus 32 ~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~~ 93 (200)
T 2qt5_A 32 DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKN-VGERVVLEVEY-EL 93 (200)
T ss_dssp SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHT-CCSEEEEEEEE-EC
T ss_pred CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEec-cC
Confidence 467899999999999999 9999999999999999999 888876654 57899999999 44
No 291
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.58 E-value=3.7e-08 Score=81.00 Aligned_cols=75 Identities=16% Similarity=0.281 Sum_probs=57.9
Q ss_pred ccccceeecCCHHHHHHhhccCCCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecC--CHHHHHHHHhcCCCC
Q 012318 362 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGE 439 (466)
Q Consensus 362 ~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~ 439 (466)
.-+|+.+..+.... ........+++|..|.++|||+++||++||+|++|||+++. +++++.+++....+
T Consensus 27 ~~~G~~l~~~~~~~--------~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~- 97 (104)
T 2z17_A 27 ETFGFEIQSYRPQN--------QNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGN- 97 (104)
T ss_dssp SCCSEEEEECCCCC--------CSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHTTT-
T ss_pred CCccEEEEeeeccc--------CCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-
Confidence 45788887643210 00012346899999999999999999999999999999999 88999999887644
Q ss_pred eEEEEE
Q 012318 440 PLKVVV 445 (466)
Q Consensus 440 ~v~l~v 445 (466)
.+.|+|
T Consensus 98 ~v~l~v 103 (104)
T 2z17_A 98 LLTIET 103 (104)
T ss_dssp EEEEEC
T ss_pred cEEEEE
Confidence 777765
No 292
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.56 E-value=2.8e-07 Score=84.38 Aligned_cols=70 Identities=21% Similarity=0.384 Sum_probs=56.2
Q ss_pred CCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEEC--CCeEEEEEEEec
Q 012318 389 VKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRA--NDQLVTLTVIPE 460 (466)
Q Consensus 389 ~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~--~g~~~~l~v~~~ 460 (466)
...|++|..|.++|||++ ||++||+|++|||+++.+. .++...+.. .+..+.|+|.|. +|+..++.+++.
T Consensus 22 ~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~~~~G~~~~~~v~~~ 95 (195)
T 2qbw_A 22 DDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT-FQNTVELIIVREVGNGAKQEIRVRVE 95 (195)
T ss_dssp TCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEcCCCCCCceeEeEee
Confidence 457999999999999999 9999999999999999885 455555554 456899999983 466666666654
No 293
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.56 E-value=6.9e-08 Score=88.90 Aligned_cols=61 Identities=23% Similarity=0.486 Sum_probs=56.3
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEECCCeE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQL 452 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~~g~~ 452 (466)
..|++|..|.++|||+++| |++||+|++|||+++. +++++.+++.. .++.+.|+|.| +++.
T Consensus 134 ~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~v~l~v~R-~~~~ 197 (200)
T 2qt5_A 134 SRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEATLLIEY-DVSV 197 (200)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TCSEEEEEEEE-EEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE-CCcc
Confidence 4689999999999999999 9999999999999999 99999999987 78999999999 6554
No 294
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.55 E-value=8.3e-08 Score=79.23 Aligned_cols=57 Identities=23% Similarity=0.421 Sum_probs=48.6
Q ss_pred cceeecccCCCChhhhCC--CCCCCEEEEECCEecCCH--HHHHHHHhcCC---CCeEEEEEEE
Q 012318 391 SGVLVPVVTPGSPAHLAG--FLPSDVVIKFDGKPVQSI--TEIIEIMGDRV---GEPLKVVVQR 447 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG--l~~GD~I~~ing~~v~~~--~~~~~~l~~~~---g~~v~l~v~R 447 (466)
.+++|..|.++|||+++| |++||+|++|||+++.++ .++..++.... +..+.|+|.|
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP 106 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEEC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEc
Confidence 589999999999999999 999999999999999865 56666676532 3589999987
No 295
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.55 E-value=1.1e-07 Score=87.82 Aligned_cols=68 Identities=15% Similarity=0.248 Sum_probs=54.1
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCC----HHHHHHHHhcCCCCeEEEEEEECCCeE--EEEEEEe
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS----ITEIIEIMGDRVGEPLKVVVQRANDQL--VTLTVIP 459 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~----~~~~~~~l~~~~g~~v~l~v~R~~g~~--~~l~v~~ 459 (466)
.|++|.+|.++|||+++| |++||+|++|||+++.+ +.++..++....+..+.|+|.| +++. ..+++..
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R-~~~~~~~~~~v~l 119 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFR-ADPPELEKFNVDL 119 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEEC-CSSCCEEEEEEEE
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEe-cccCCCcEEEEEE
Confidence 589999999999999998 99999999999999998 6667666665444449999999 5542 3444443
No 296
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.55 E-value=9.1e-08 Score=80.41 Aligned_cols=58 Identities=24% Similarity=0.447 Sum_probs=50.7
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEEC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRA 448 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~ 448 (466)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++.+.|+|.|.
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~r~ 109 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKN-AGNPVVFIVQSL 109 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHT-SCSSEEEEECCB
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 4699999999999999999 99999999999999976 6677776665 578899999983
No 297
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.55 E-value=6.3e-08 Score=83.10 Aligned_cols=58 Identities=17% Similarity=0.354 Sum_probs=53.0
Q ss_pred CcceeecccCCCChhhhC-CCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~a-Gl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
..+++|..|.+++||+++ ||++||+|++|||+++.+ ++++.++|+...+..+.|+|.|
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r 116 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRR 116 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEe
Confidence 458999999999999999 999999999999999987 6888888888777789999999
No 298
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.54 E-value=7.8e-08 Score=80.85 Aligned_cols=59 Identities=22% Similarity=0.481 Sum_probs=50.2
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+ +||++||+|++|||+++.++ .++..++.. .++.+.|+|.| .+.
T Consensus 45 ~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R-~~~ 105 (117)
T 2csj_A 45 ETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRK-SGKIAAIVVKR-PRK 105 (117)
T ss_dssp CCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHH-SCSEEEEEEEE-EEE
T ss_pred CCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhc-CCCeEEEEEEE-CCc
Confidence 5689999999999997 99999999999999999874 566666665 58899999999 443
No 299
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.53 E-value=8.2e-08 Score=80.00 Aligned_cols=57 Identities=23% Similarity=0.512 Sum_probs=49.9
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|..|.++|||+++| |++||+|++|||+++.++ .++..++. ..++.+.|+|.|
T Consensus 38 ~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~-~~~~~v~l~v~r 97 (113)
T 1um7_A 38 GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALK-RAGQSVTIVAQY 97 (113)
T ss_dssp TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHH-SCCSEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-hCCCcEEEEEEE
Confidence 3689999999999999999 999999999999999987 56666555 467889999998
No 300
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.52 E-value=1.1e-07 Score=96.81 Aligned_cols=60 Identities=22% Similarity=0.372 Sum_probs=55.0
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhc-CCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGD-RVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~-~~g~~v~l~v~R~~g 450 (466)
..|++|..|.++|||+++||++||+|++|||+++.+ ++++..++.. .+|+.++|+|.| ++
T Consensus 30 ~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r-~~ 92 (391)
T 3tsz_A 30 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQK-KK 92 (391)
T ss_dssp TTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEE-CH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEee-CC
Confidence 369999999999999999999999999999999976 8999998886 789999999999 54
No 301
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.51 E-value=4.8e-07 Score=79.55 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=78.4
Q ss_pred CCCCEEEEEeCCCC----CCCccccCCCCCCCCCCEEEEEecCCCC--------CCceEEeEEeeeecCccCCCCC-Ccc
Q 012318 208 FHSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL--------QNTVTAGIVSCVDRKSSDLGLG-GMR 274 (466)
Q Consensus 208 ~~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~--------~~~~t~G~Vs~~~~~~~~~~~~-~~~ 274 (466)
..+|||||+|+.+. .+.++.|... ....|+.+++.||.... ...+....+.-+....|...+. ...
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~-~~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~ 84 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQ-EPELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVT 84 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSS-CCCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCC
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCC-CCCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCC
Confidence 36799999999763 3567777653 34679999999997532 2234444444443332221111 111
Q ss_pred ccEEEEc-----ccCCCCCccceeecCCCeEEEEEEeEecCC---CeeeEEEeHHHHHHHHHHHHH
Q 012318 275 REYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 275 ~~~i~~~-----~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~---~g~~~aip~~~i~~~l~~l~~ 332 (466)
...+... ...|.|+|||||+- +|+++||++++.... ..-+.+.-+....+|+++.++
T Consensus 85 ~~~iCa~~~~~~~~~C~GDsGgPL~~-~g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 149 (152)
T 2pka_B 85 ESMLCAGYLPGGKDTCMGDSGGPLIC-NGMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTIT 149 (152)
T ss_dssp TTEEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCEEeeccCCCCCcccCCccccceEE-CCEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhc
Confidence 2344432 35799999999994 589999999973211 224667888888899887654
No 302
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.51 E-value=1.3e-07 Score=86.86 Aligned_cols=59 Identities=17% Similarity=0.385 Sum_probs=54.6
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~~g 450 (466)
..|++|.+|.++|||+++| |++||+|++|||+++.+ ++++.+++... ++.+.|+|.| ++
T Consensus 134 ~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R-~~ 195 (196)
T 1p1d_A 134 GDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC-EDLVKLKIRK-DE 195 (196)
T ss_dssp TCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC-TTCEEEEEEC-CC
T ss_pred CCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEe-CC
Confidence 4689999999999999999 99999999999999999 99999999876 8899999999 54
No 303
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.50 E-value=2.4e-07 Score=83.25 Aligned_cols=57 Identities=23% Similarity=0.452 Sum_probs=51.6
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEec--CCHHHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v--~~~~~~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|..|.++|||+++| |++||+|++|||+.+ .++.++..+|+. .+..+.|+|.|
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~g~~v~L~V~R 169 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN-TKGRVRFMIGR 169 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH-CCSEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEe
Confidence 4689999999999999999 999999999999999 567788888876 67899999998
No 304
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.49 E-value=2.3e-07 Score=76.13 Aligned_cols=57 Identities=19% Similarity=0.417 Sum_probs=49.8
Q ss_pred cceeecccCCCChhhh-CCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEEC
Q 012318 391 SGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRA 448 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~-aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~ 448 (466)
.|++|..|.++|||++ +||++||+|++|||+++.+ ++++..++... +..++|+|.|.
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~~~ 94 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ-RGEIEFEVVYV 94 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHC-CSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCcEEEEEEec
Confidence 5899999999999999 5999999999999999955 78888877764 45899999983
No 305
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.47 E-value=2.2e-07 Score=73.06 Aligned_cols=52 Identities=17% Similarity=0.356 Sum_probs=46.1
Q ss_pred ecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 395 VPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 395 V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
|..+.++|||+++||+.||+|++|||+.+.. .+++.++|+ ..|.+++|+|..
T Consensus 27 I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr-~~g~~V~L~v~p 80 (82)
T 1r6j_A 27 ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILS-TSGTVVTITIMP 80 (82)
T ss_dssp EEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEEE
T ss_pred EEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHh-cCCCEEEEEEEe
Confidence 7899999999999999999999999999965 467888888 678889999875
No 306
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.45 E-value=9.9e-08 Score=78.47 Aligned_cols=56 Identities=16% Similarity=0.292 Sum_probs=49.7
Q ss_pred ceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcC----CCCeEEEEEEE
Q 012318 392 GVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDR----VGEPLKVVVQR 447 (466)
Q Consensus 392 g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~----~g~~v~l~v~R 447 (466)
+++|..|.+++||+++| |++||+|++|||+++.+ ++++.++|... .++.+.+.|.|
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r 95 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTE 95 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEE
Confidence 34899999999999999 99999999999999966 88988888653 67889999998
No 307
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.83 E-value=2.2e-08 Score=83.74 Aligned_cols=55 Identities=20% Similarity=0.413 Sum_probs=45.5
Q ss_pred cceeecccCCCChhhh-CCCCCCCEEEEECCEec--CCHHHHHHHHhcCCCCeEEEEEE
Q 012318 391 SGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQ 446 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~-aGl~~GD~I~~ing~~v--~~~~~~~~~l~~~~g~~v~l~v~ 446 (466)
.|++|..|.++|||++ +||++||+|++|||+++ .+++++..++.. .++.++|+|.
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~-~~~~v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ-QRGEIEFEVV 110 (112)
Confidence 5799999999999999 99999999999999999 457777777764 3444777664
No 308
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.41 E-value=1.2e-08 Score=95.47 Aligned_cols=67 Identities=24% Similarity=0.470 Sum_probs=57.2
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeE-EEEEEECCCeEE--EEEEEe
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPL-KVVVQRANDQLV--TLTVIP 459 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v-~l~v~R~~g~~~--~l~v~~ 459 (466)
.|++|..|.++|||+++||++||+|++|||++|. +++++..++... |+.+ .|+|.| +|+.. ++.+++
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~-g~~v~~l~V~R-~g~~~~~~v~v~p 104 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLVVDR-ETDEFFKKCRVIP 104 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHH-CSEEEEEECCH-HHHHHHHHHTCCC
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc-CCeEEEEEEEE-CCEEEEEEEEEEE
Confidence 4899999999999999999999999999999999 999999888765 7888 899988 66554 444443
No 309
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.41 E-value=6.8e-07 Score=74.52 Aligned_cols=58 Identities=17% Similarity=0.359 Sum_probs=49.2
Q ss_pred cceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhc-CCCCeEEEEEEECCCe
Q 012318 391 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGD-RVGEPLKVVVQRANDQ 451 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~-~~g~~v~l~v~R~~g~ 451 (466)
.|.+|..|.+ ++..+||++||+|++|||++|.+ ++++.++|+. ..|+.++|+|.| +|.
T Consensus 34 ~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R-~g~ 94 (113)
T 3soe_A 34 TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILR-GGP 94 (113)
T ss_dssp TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEE-SSC
T ss_pred CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEE-CCc
Confidence 3566888877 68899999999999999999985 5789999987 458899999999 554
No 310
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.38 E-value=3.8e-07 Score=94.34 Aligned_cols=60 Identities=22% Similarity=0.372 Sum_probs=54.9
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCC--HHHHHHHHhc-CCCCeEEEEEEECCC
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGD-RVGEPLKVVVQRAND 450 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~-~~g~~v~l~v~R~~g 450 (466)
..|++|..|.++|||+++||++||+|++|||+++.+ ++++..+|.. ..|+.++|+|.| ++
T Consensus 22 ~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r-~g 84 (468)
T 3shw_A 22 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQK-KK 84 (468)
T ss_dssp TTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEE-CH
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEE-CC
Confidence 368999999999999999999999999999999987 8899988876 588999999999 54
No 311
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.31 E-value=5.9e-07 Score=82.83 Aligned_cols=57 Identities=14% Similarity=0.339 Sum_probs=50.5
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEEC
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRA 448 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~ 448 (466)
.|++|.+|.++|+|+++| |++||+|++|||++|.++ +++..++.. .++.+.|+|.|.
T Consensus 136 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~L~V~R~ 195 (206)
T 3r0h_A 136 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG-ANGKVSMEVTRP 195 (206)
T ss_dssp SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEEE
T ss_pred ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 589999999999999999 999999999999999965 677777765 567899999994
No 312
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.27 E-value=6e-07 Score=91.29 Aligned_cols=66 Identities=15% Similarity=0.306 Sum_probs=54.6
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCCH--HHHHHHHhc-CCCCeEEEEEEECCCeEEEEEE
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGD-RVGEPLKVVVQRANDQLVTLTV 457 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~-~~g~~v~l~v~R~~g~~~~l~v 457 (466)
.|++|..|.++|||+++| |++||+|++|||+++.+| +++..++.. ..+..++|+|.| ++...++.+
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r-~~~~~~v~l 301 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVS-CPPVTTVLI 301 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEE-CCSCC----
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCcccccccc-ccccceeeE
Confidence 468999999999999999 999999999999999998 678888876 366789999999 666655555
No 313
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.26 E-value=1.1e-07 Score=98.57 Aligned_cols=66 Identities=29% Similarity=0.492 Sum_probs=0.0
Q ss_pred CcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQLVTLTV 457 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v 457 (466)
..|++|.+|.++|||+++||++||+|++|||+++.+++++.+++....+ .+.|+|.| +|+.+++.+
T Consensus 382 ~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l~~~l~~~~~-~v~l~v~R-~g~~~~~~l 447 (448)
T 1ky9_A 382 DQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPS-VLALNIQR-GDSTIYLLM 447 (448)
T ss_dssp --------------------------------------------------------------------
T ss_pred CCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHcCCC-eEEEEEEE-CCEEEEEEe
Confidence 4689999999999999999999999999999999999999998887555 78999999 787766654
No 314
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.24 E-value=5.1e-07 Score=92.03 Aligned_cols=57 Identities=23% Similarity=0.365 Sum_probs=50.4
Q ss_pred ceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 392 GVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 392 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
.++|..|.++|||++|||++||+|++|||++|.+++ +.+++.. +|.+++|+|.| +|+
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~~~~l~~-~g~~v~l~v~R-~g~ 147 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-ESELLQG-STRQLQIGVYK-EVV 147 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-GGGGTSC-SCEEEEEEEEE-EEC
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-HHHHhhC-CCCEEEEEEEe-CCc
Confidence 478999999999999999999999999999999985 6666666 88999999999 544
No 315
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=98.21 E-value=7.6e-05 Score=69.05 Aligned_cols=171 Identities=15% Similarity=0.158 Sum_probs=108.4
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEE-----EEEEecC
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEG-----TVLNADF 208 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a-----~vv~~d~ 208 (466)
++..|+.|+...+. ....--|+.+. + +|+|++|..+.. ++.++|....|. |.. --+..-+
T Consensus 22 Ia~~ic~l~n~sdg-----~~~~l~gigyG-~-~iItn~HLf~~n-------nG~L~I~s~hG~-f~v~nt~~lki~~i~ 86 (229)
T 1lvm_A 22 ISSTICHLTNESDG-----HTTSLYGIGFG-P-FIITNKHLFRRN-------NGTLLVQSLHGV-FKVKNTTTLQQHLID 86 (229)
T ss_dssp HHTTEEEEEEEETT-----EEEEEEEEEET-T-EEEECGGGGGCC-------SSEEEEEETTEE-EEESCGGGSEEEECT
T ss_pred hheEEEEEEeccCC-----ceEEEEEEeEC-C-EEEeChhhhccC-------CCcEEEEeCCCe-EEeCCCCceeeEEeC
Confidence 45678888764322 11223455554 3 999999999875 367888887663 221 1234457
Q ss_pred CCCEEEEEeCCCCCCCccccCC-CCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCC
Q 012318 209 HSDIAIVKINSKTPLPAAKLGT-SSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAG 287 (466)
Q Consensus 209 ~~DlAlLkv~~~~~~~~~~l~~-s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G 287 (466)
..||.+||++.+ +||.+-.. -..++.++.|+++|.-+..... ...|+........ ....++.+...+..|
T Consensus 87 g~DiiiIrmPkD--fpPf~~~l~FR~P~~~e~V~lVg~~fq~k~~--~s~vSesS~i~p~-----~~~~fWkHwIsT~~G 157 (229)
T 1lvm_A 87 GRDMIIIRMPKD--FPPFPQKLKFREPQREERICLVTTNFQTKSM--SSMVSDTSCTFPS-----SDGIFWKHWIQTKDG 157 (229)
T ss_dssp TSSCEEEECCTT--SCCCCSCCCBCCCCTTCEEEEEEEECSSSSC--EEEECCCEECEEE-----TTTTEEEECBCCCTT
T ss_pred CccEEEEeCCCc--CCCcccccccCCCCCCCeEEEEEeEeecCCc--cEEECCcceeEec-----CCCCEeEEEeeCCCC
Confidence 889999999954 44443221 2467899999999986543322 1223322111111 113577888899999
Q ss_pred CccceeecC-CCeEEEEEEeEecCCCeeeEEEeHHH-HHHHHHH
Q 012318 288 NSGGPLVNI-DGEIVGINIMKVAAADGLSFAVPIDS-AAKIIEQ 329 (466)
Q Consensus 288 ~SGGPlvd~-~G~VVGI~~~~~~~~~g~~~aip~~~-i~~~l~~ 329 (466)
+=|.|||+. ||.+||+++..... ...+|+.|+.. +.++|+.
T Consensus 158 ~CGlPlVs~~Dg~IVGiHsl~~~~-~~~NyF~~f~~~f~~~L~~ 200 (229)
T 1lvm_A 158 QCGSPLVSTRDGFIVGIHSASNFT-NTNNYFTSVPKNFMELLTN 200 (229)
T ss_dssp CTTCEEEETTTCCEEEEEEEEETT-SCSEEEEECCTTHHHHHHC
T ss_pred cCCCcEEECCCCcEEEEEcccccC-CCeEEEeCCCHHHHHHHhc
Confidence 999999976 59999999997654 34688887654 3344443
No 316
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.19 E-value=1.2e-06 Score=83.93 Aligned_cols=57 Identities=18% Similarity=0.352 Sum_probs=50.5
Q ss_pred CcceeecccCCCChhhh-CCCCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~-aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|..|.++|||++ +||++||+|++|||+++.+ ++++..++... |+.++|+|.|
T Consensus 102 ~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~-g~~V~L~V~R 161 (263)
T 1z87_A 102 KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-GKEVVLEVKY 161 (263)
T ss_dssp TEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHC-CSCCCEEEEC
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcC-CCeEEEEEEe
Confidence 36899999999999999 7999999999999999988 47777777664 7789999999
No 317
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.16 E-value=6.4e-06 Score=66.20 Aligned_cols=58 Identities=7% Similarity=0.149 Sum_probs=50.4
Q ss_pred cceeecccCCCChhhhCC-CCCCCEEEEECCEecCCH--HHHHHHHhc-CCCCeEEEEEEEC
Q 012318 391 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGD-RVGEPLKVVVQRA 448 (466)
Q Consensus 391 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~-~~g~~v~l~v~R~ 448 (466)
..++|..|.++++|++.| |+.||.|++|||+.+..+ .++.++|++ ..|.+++|.+.++
T Consensus 28 g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p 89 (95)
T 3gge_A 28 GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEP 89 (95)
T ss_dssp SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECc
Confidence 457899999999999987 999999999999999765 688899987 5678899998873
No 318
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.03 E-value=6.2e-06 Score=93.94 Aligned_cols=69 Identities=16% Similarity=0.233 Sum_probs=60.8
Q ss_pred cceeecccCCC--------ChhhhCC--CCCCCEEEEECCEecCCHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEec
Q 012318 391 SGVLVPVVTPG--------SPAHLAG--FLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPE 460 (466)
Q Consensus 391 ~g~~V~~V~~~--------spA~~aG--l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~ 460 (466)
.+++|..|.++ |||+++| |+ ||+|++|||+++.++.++..+|....|+.++|+|.|++++.+++++++.
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~~~~~~~ 826 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNIYRVLSEKAGTSARIRLSGKGGDKRDLMIDIL 826 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCHHHHHHTTTTSEEEEEEECSSSCEEEEEEECB
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhhHHHhhcCCCCCEEEEEEECCCCceEEEEEEEc
Confidence 57889999887 9999999 99 9999999999999998898888888899999999994446677888753
No 319
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.96 E-value=2.2e-05 Score=82.66 Aligned_cols=91 Identities=16% Similarity=0.180 Sum_probs=70.8
Q ss_pred cccceeecCCHHHHHHhhccC------------CCCCCCCcceeecccCCCChhhhCCCCCCCEEEEECCEecCCHHHHH
Q 012318 363 WLGLKMLDLNDMIIAQLKERD------------PSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEII 430 (466)
Q Consensus 363 ~lG~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~ 430 (466)
+.|+.+..+++.+++++.... ........|++|..|.++++|..+|+++||+|++|||++|.+.++|.
T Consensus 375 ~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~l~ 454 (539)
T 4fln_A 375 VAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLA 454 (539)
T ss_dssp STTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHHHH
T ss_pred ccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHHHH
Confidence 679999999998766542211 11112346899999999999999999999999999999999999999
Q ss_pred HHHhcCCCCeEEEEEEECCCeEEEE
Q 012318 431 EIMGDRVGEPLKVVVQRANDQLVTL 455 (466)
Q Consensus 431 ~~l~~~~g~~v~l~v~R~~g~~~~l 455 (466)
+++.+..++.+.|.+. +++.+.|
T Consensus 455 ~~l~~~k~~~l~~~~~--~~~~ivL 477 (539)
T 4fln_A 455 HLIDMCKDKYLVFEFE--DNYVAVL 477 (539)
T ss_dssp HHHHTCCSSEEEEEET--TSCEEEE
T ss_pred HHHHHcCCCeEEEEEC--CCEEEEE
Confidence 9999877777666643 4555433
No 320
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.92 E-value=1.1e-06 Score=78.30 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=32.2
Q ss_pred eecccCCCChhhhCCCCCCCEEEEECCEecCCHH
Q 012318 394 LVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSIT 427 (466)
Q Consensus 394 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~ 427 (466)
+|..|.++|||+++||++||+|++|||+++.++.
T Consensus 110 ~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~ 143 (166)
T 1w9e_A 110 KITSIVKDSSAARNGLLTEHNICEINGQNVIGLK 143 (166)
T ss_dssp EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCC
T ss_pred EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCC
Confidence 7889999999999999999999999999999873
No 321
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.92 E-value=1.9e-05 Score=86.59 Aligned_cols=60 Identities=17% Similarity=0.403 Sum_probs=51.7
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCCH--HHHHHHHhcCCCCeEEEEEEECCCe
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQ 451 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~~g~ 451 (466)
..|++|..|.++|||+++| |+.||+|++|||+++.++ .++..++.. .|+.++|+|.| ++.
T Consensus 88 ~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~~~ 150 (721)
T 2xkx_A 88 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE-AGSIVRLYVMR-RKP 150 (721)
T ss_pred CCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhc-cccccceEEEe-ccc
Confidence 5789999999999999999 999999999999999988 455655543 67889999999 553
No 322
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.70 E-value=4.7e-05 Score=83.45 Aligned_cols=57 Identities=18% Similarity=0.474 Sum_probs=51.7
Q ss_pred CcceeecccCCCChhhhCC-CCCCCEEEEECCEecCC--HHHHHHHHhcCCCCeEEEEEEE
Q 012318 390 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 390 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R 447 (466)
..|++|..|.++|+|+++| |++||+|++|||++|.+ ++++.++|.. .++.+.|.|.|
T Consensus 330 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~-~~~~v~L~v~r 389 (721)
T 2xkx_A 330 GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN-AGQTVTIIAQY 389 (721)
T ss_pred CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHh-cCCeEEEEEEe
Confidence 3689999999999999999 99999999999999987 8899988876 46779999998
No 323
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=97.54 E-value=0.0026 Score=57.55 Aligned_cols=155 Identities=17% Similarity=0.167 Sum_probs=87.7
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEE--EEEecC---
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGT--VLNADF--- 208 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~--vv~~d~--- 208 (466)
++..+|.|++.. +.-||..|-.+ ++|...|...+ .++.+ +|+.+... ....|.
T Consensus 11 ~k~N~~~vtt~~---------G~ft~LgI~dr-~~lvP~Ha~~~---------~ti~i---~g~~~~v~d~~~l~~~~~~ 68 (190)
T 3zve_A 11 MKKNTVVARTEK---------GEFTMLGVHDR-VAVIPTHASVG---------ETIYI---NDVETKVLDACALRDLTDT 68 (190)
T ss_dssp HHHHEEEEEETT---------EEEEEEEEEBT-EEEEEGGGCCC---------SEEEE---TTEEEEEEEEEEEECTTCC
T ss_pred HHcCEEEEEeCC---------EEEEEEEEeCC-EEEEecCCCCC---------cEEEE---CCEEEEeeEEEEEEcCCCC
Confidence 344677776533 44689888877 99999996643 34443 34333221 111232
Q ss_pred CCCEEEEEeCCCCCCCcc--ccCCCCCCCCCCEEEEEecCCCCCCc-eEEeEEeeeecCccCCCCCCccccEEEEcccCC
Q 012318 209 HSDIAIVKINSKTPLPAA--KLGTSSKLCPGDWVVAMGCPHSLQNT-VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAIN 285 (466)
Q Consensus 209 ~~DlAlLkv~~~~~~~~~--~l~~s~~~~~G~~V~~iG~p~~~~~~-~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~ 285 (466)
..||++++++....++-+ .+.+ ......+.+.++=.+ ..... +..|.+....... -.+.....++.+++++.
T Consensus 69 ~~Dlt~v~l~~~~kFRDIr~~~~~-~~~~~~~~~l~i~s~-~~~~~~~~v~~v~~~~~i~---l~g~~~~~~~~Y~~pT~ 143 (190)
T 3zve_A 69 NLEITIVKLDRNQKFRDIRHFLPR-YEDDYNDAVLSVHTS-KFPNMYIPVGQVTNYGFLN---LGGTPTHRILMYNFPTR 143 (190)
T ss_dssp EEEEEEEEECCSSCBCCCGGGSCS-SCCCEEEEEEEECSS-SCSSEEEEEEEEEEEEEEE---ETTEEEEEEEEESSCCC
T ss_pred eEEEEEEEcCCCcccCchHHhccc-cCCCCCCeEEEEECC-CCcceEEecccceEeceee---cCCCeeeeeEEEecCCC
Confidence 459999999976444332 1222 111222333333222 22332 2334443322111 01223346788999999
Q ss_pred CCCccceeecCCCeEEEEEEeEecCCCeeeEEEe
Q 012318 286 AGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVP 319 (466)
Q Consensus 286 ~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip 319 (466)
.|+=||||+ .+|+++||+.++. ...+|+.+
T Consensus 144 ~G~CG~~li-~~gkI~GiHvaG~---G~~g~~~~ 173 (190)
T 3zve_A 144 AGQCGGVVT-TTGKVIGIHVGGN---GAQGFAAM 173 (190)
T ss_dssp TTCTTCEEE-ETTEEEEEEEEEC---SSCEEEEE
T ss_pred CCccCCeEE-ECCCEEEEEECcC---CCceEehh
Confidence 999999999 5799999999873 23566654
No 324
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=97.53 E-value=0.0065 Score=54.55 Aligned_cols=159 Identities=14% Similarity=0.100 Sum_probs=94.7
Q ss_pred HHhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEE--EEEecC-
Q 012318 132 ARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGT--VLNADF- 208 (466)
Q Consensus 132 ~~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~--vv~~d~- 208 (466)
.-++..++.|++.. +.-||+-|-.+ .+|-..|.-.+ +.+.| +|+.++.. ..-.|.
T Consensus 11 sl~k~N~~~vtT~~---------G~ft~LgI~dr-~~vvPtHa~~~---------~~i~i---~G~~~~v~d~~~L~~~~ 68 (191)
T 3q3y_A 11 AMMKRNASTVKTEY---------GEFTMLGIYDR-WAVLPRHAKPG---------PTILM---NDQEVGVLDAKELVDKD 68 (191)
T ss_dssp HHHHHHEEEEEETT---------EEEEEEEEEBT-EEEEEGGGCCC---------SEEEE---TTEEEEEEEEEEEECTT
T ss_pred HHHHcCeEEEEECC---------CcEEEEEEece-EEEEECCCCCC---------CEEEE---CCEEEEeeeEEEEEcCC
Confidence 44556788888744 33588888766 89999999433 34433 56666531 111232
Q ss_pred --CCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc-eEEeEEeeeecCccCCCCCCccccEEEEcccCC
Q 012318 209 --HSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT-VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAIN 285 (466)
Q Consensus 209 --~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~-~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~ 285 (466)
..||++|+++.+..++-++---...........++-.-....+. +..|.+...... + + .+.....++.+++++.
T Consensus 69 g~~lElt~v~l~~~~kFRDIrkfi~~~~~~~~~~~Lv~ns~~~p~~~~~vG~v~~~g~i-n-l-sg~~t~r~l~Y~~pTk 145 (191)
T 3q3y_A 69 GTNLELTLLKLNRNEKFRDIRGFLAREEVEVNEAVLAINTSKFPNMYIPVGQVTDYGFL-N-L-GGTPTKRMLVYNFPTR 145 (191)
T ss_dssp CCEEEEEEEEEECSSCBCCCGGGBCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEE-E-E-TTEEEEEEEEEESCCC
T ss_pred CCEEEEEEEECCCCccccchHHhcccccccCCceEEEEEcCCCcceEEEeccEEEcceE-e-C-CCCcccCEEEecCCCC
Confidence 35999999997654443332111223333344555444444333 333555443221 1 1 1122356889999999
Q ss_pred CCCccceeecCCCeEEEEEEeEecCCCeeeEEEe
Q 012318 286 AGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVP 319 (466)
Q Consensus 286 ~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip 319 (466)
.|.=||+|+. .|+++||+.++. ...+|+.+
T Consensus 146 ~G~CGgvL~~-~gkIiGIHvgGn---G~~Gfaa~ 175 (191)
T 3q3y_A 146 AGQCGGVLMS-TGKVLGIHVGGN---GHQGFSAA 175 (191)
T ss_dssp TTCTTCEEEE-TTEEEEEEEEEE---TTEEEEEE
T ss_pred CCccCCEEEe-CCCEEEEEECCC---CcceEEee
Confidence 9999999995 799999999872 33556654
No 325
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=97.52 E-value=0.0021 Score=58.00 Aligned_cols=157 Identities=16% Similarity=0.187 Sum_probs=91.3
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEE--EEEecC---
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGT--VLNADF--- 208 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~--vv~~d~--- 208 (466)
++..++.|++.. +..||.-|-.+ ++|-..|...+ +++.+ +|+.++.. ..-.+.
T Consensus 18 ~k~N~~~vtT~~---------G~ft~LgI~d~-~~viP~Ha~p~---------~~i~i---~G~~~~v~d~~~l~~~~gv 75 (190)
T 4dcd_A 18 AKRNIVTATTSK---------GEFTMLGVHDN-VAILPTHASPG---------ESIVI---DGKEVEILDAKALEDQAGT 75 (190)
T ss_dssp HHHHEEEEEETT---------EEEEEEEEEBT-EEEEEGGGCCC---------SEEEE---TTEEEEEEEEEEEECTTCC
T ss_pred HHcCeEEEEeCC---------eEEEEEEEECc-EEEEeCCCCCC---------cEEEE---CCEEEEeeEEEEEecCCCC
Confidence 345677777533 45789888876 99999995432 45544 35554432 112232
Q ss_pred CCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc-eEEeEEeeeecCccCCCCCCccccEEEEcccCCCC
Q 012318 209 HSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT-VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAG 287 (466)
Q Consensus 209 ~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~-~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G 287 (466)
..||++++++....+.-++---.+.......+..+=+-...... +..|.+....... ..+......+.+++++.+|
T Consensus 76 ~lElt~V~l~r~~kFRDIr~fi~~~~~~~~~~~L~vn~~~~~~~~~~vg~v~~~g~i~---lsg~~t~r~l~Y~~pT~~G 152 (190)
T 4dcd_A 76 NLEITIITLKRNEKFRDIRPHIPTQITETNDGVLIVNTSKYPNMYVPVGAVTEQGYLN---LGGRQTARTLMYNFPTRAG 152 (190)
T ss_dssp EEEEEEEEESSSCCBCCCGGGSCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEEE---ETTEEEEEEEEESSCCCTT
T ss_pred eEEEEEEEcCCCccccchhHhccccCCCCCceEEEEecCCCccEEEEeeeeEEecccc---CCCCcccceEEEccCCCCC
Confidence 35999999997654443321011122233444443333333332 3334443332211 1123345678999999999
Q ss_pred CccceeecCCCeEEEEEEeEecCCCeeeEEEe
Q 012318 288 NSGGPLVNIDGEIVGINIMKVAAADGLSFAVP 319 (466)
Q Consensus 288 ~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip 319 (466)
+=||||+ ..|+++||+.++. ...+|+.+
T Consensus 153 ~CGg~l~-~~gkIlGIHvaG~---G~~G~aa~ 180 (190)
T 4dcd_A 153 QCGGVIT-CTGKVIGMHVGGN---GSHGFAAA 180 (190)
T ss_dssp CTTCEEE-ETTEEEEEEEEEC---SSCEEEEE
T ss_pred ccCCEEE-eCCCEEEEEECCC---CCceEeee
Confidence 9999999 4799999999873 34566654
No 326
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=97.50 E-value=0.0042 Score=55.82 Aligned_cols=161 Identities=13% Similarity=0.106 Sum_probs=96.3
Q ss_pred HHHHhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEE--EEec
Q 012318 130 AAARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTV--LNAD 207 (466)
Q Consensus 130 ~~~~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~v--v~~d 207 (466)
+..-++..++.|++.. +.-||+.|-.+ ..|-..|...+ +++.+ +|+.++..- .-.|
T Consensus 11 ~~~l~~~N~~~vtt~~---------g~ft~LgI~dr-~~vvP~Ha~~~---------~~i~i---~g~~~~v~d~~~L~~ 68 (187)
T 3qzr_A 11 ALSLLRRNVRQVQTDQ---------GHFTMLGVRDR-LAVLPRHSQPG---------KTIWI---EHKLVNVLDAVELVD 68 (187)
T ss_dssp HHHHHHHHEEEEEETT---------EEEEEEEEEBT-EEEEEGGGCCC---------SEEEE---TTEEEEEEEEEECCC
T ss_pred HHHHHHcCeEEEEECC---------CeEEEEEEeee-EEEEeCCCCCC---------CEEEE---CCEEEEeeeeEEEEC
Confidence 3445567788888743 33589999866 99999999443 34433 566655321 1112
Q ss_pred ---CCCCEEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCC-ceEEeEEeeeecCccCCCCCCccccEEEEccc
Q 012318 208 ---FHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQN-TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCA 283 (466)
Q Consensus 208 ---~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~-~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~ 283 (466)
...||++++++....++-++---.........+.++-......+ .+..|.+...... + + .+......+.++.+
T Consensus 69 ~~g~~~Elt~v~l~~~~kfRDIrkfi~~~~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~i-n-l-sg~~t~r~l~Y~~p 145 (187)
T 3qzr_A 69 EQGVNLALTLITLDTNEKFRDITKFIPENISTASDATLVINTEHMPSMFVPVGDVVQYGFL-N-L-SGKPTHRTMMYNFP 145 (187)
T ss_dssp TTCCCCSEEEEEECSSCCBCCCGGGSCSSCCCEEEEEEEECCSSSCSEEEEEEEEEEEEEE-E-E-TTEEEEEEEEESSC
T ss_pred CCCCEEEEEEEEcCCCccccchHHhCccCcCCCCceEEEEEcCCCcceEEEeccEEEeceE-e-C-CCCccccEEEECCC
Confidence 24699999999765444332111122222234555555444433 3334555443221 1 1 11223568899999
Q ss_pred CCCCCccceeecCCCeEEEEEEeEecCCCeeeEEEe
Q 012318 284 INAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVP 319 (466)
Q Consensus 284 i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip 319 (466)
+..|.=||+|+. .|+++|||.++ ....+|+.+
T Consensus 146 Tk~G~CGgvl~~-~gkIiGIHvaG---nG~~G~~a~ 177 (187)
T 3qzr_A 146 TKAGQCGGVVTS-VGKIIGIHIGG---NGRQGFCAG 177 (187)
T ss_dssp CCTTCTTCEEEE-TTEEEEEEEEE---CSSCEEEEE
T ss_pred CCCCccCCeEEe-cCcEEEEEECC---CCCcEEEEE
Confidence 999999999995 89999999987 233566654
No 327
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=97.42 E-value=0.0046 Score=57.10 Aligned_cols=176 Identities=15% Similarity=0.128 Sum_probs=97.3
Q ss_pred HHHHHHhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceE--EEEeCCCcEEEEE---
Q 012318 128 ANAAARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKV--DVTLQDGRTFEGT--- 202 (466)
Q Consensus 128 ~~~~~~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i--~V~~~~g~~~~a~--- 202 (466)
.++...+.+-.|+|.....+. .....+||+.|..+ ++|...|....... ...+ .+. -+|+.|...
T Consensus 3 ~~i~~~v~~N~~~i~~~~~~~---~~~~~~t~LgI~~r-~~lvP~H~~~~~~~-----~~~~~~~i~-i~g~~~~~~~~~ 72 (212)
T 2hal_A 3 LEIAGLVRKNLVQFGVGEKNG---SVRWVMNALGVKDD-WLLVPSHAYKFEKD-----YEMMEFYFN-RGGTYYSISAGN 72 (212)
T ss_dssp HHHHHHHHHHEEEEEEEETTS---CCEEEEEEEEEEBT-EEEEEGGGTTTSTT-----GGGEEEEEE-ETTEEEEEEGGG
T ss_pred eeehhhhhccEEEEEEeCCCC---CcceEEEEEEEcCC-EEEEecccCccccc-----ccccceEEE-ECCEEEeecccc
Confidence 455667777888888765332 22256899999977 99999999753210 0112 222 255655543
Q ss_pred --EEEec-CCCCEEEEEeCCCCCCCccc--cCCCCCC-CCCC-EEEEEecCCCCCCceEEe------EEeeeecCccCCC
Q 012318 203 --VLNAD-FHSDIAIVKINSKTPLPAAK--LGTSSKL-CPGD-WVVAMGCPHSLQNTVTAG------IVSCVDRKSSDLG 269 (466)
Q Consensus 203 --vv~~d-~~~DlAlLkv~~~~~~~~~~--l~~s~~~-~~G~-~V~~iG~p~~~~~~~t~G------~Vs~~~~~~~~~~ 269 (466)
+...| ...||++++++....++.++ +.+..++ ..++ .+.+++...+.+.....+ .++..... .
T Consensus 73 v~~~~~d~~~~Dl~lv~Lp~~~~FrDIrk~f~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~-- 148 (212)
T 2hal_A 73 VVIQSLDVGFQDVVLMKVPTIPKFRDITQHFIKKGDVPRALNRLATLVTTVNGTPMLISEGPLKMEEKATYVHKK--N-- 148 (212)
T ss_dssp SEEECSSSSCCSEEEEECTTSCCBCCCGGGBCCGGGGGGTTTSCEEEEEEETTEEEEEEECSCEEEEEEEEEEEC--T--
T ss_pred ceeEeccCCCceEEEEECCCCCccCChhHhcCCcccccccccceEEEEeccCCCceEEecccccccceeeEEEec--C--
Confidence 33333 46899999998643332221 2111111 2232 233332211111111111 11111100 0
Q ss_pred CCCccc----cEEEEcccCCCCCccceeecC----CCeEEEEEEeEecCCCeeeEEEeH
Q 012318 270 LGGMRR----EYLQTDCAINAGNSGGPLVNI----DGEIVGINIMKVAAADGLSFAVPI 320 (466)
Q Consensus 270 ~~~~~~----~~i~~~~~i~~G~SGGPlvd~----~G~VVGI~~~~~~~~~g~~~aip~ 320 (466)
.+.... ..+.+++++.+|+=||||+.. .|+++|||.++.. +.+|+.++
T Consensus 149 ~G~~~~~~~~~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~g---~~G~a~~l 204 (212)
T 2hal_A 149 DGTTVDLTVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGGN---SILVAKLV 204 (212)
T ss_dssp TSCEEEEEEEEEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEET---TEEEEEEC
T ss_pred CCcccccccceEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcCC---CcEEEEee
Confidence 111122 578899999999999999974 7999999999742 36777663
No 328
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=97.37 E-value=0.018 Score=51.60 Aligned_cols=157 Identities=15% Similarity=0.113 Sum_probs=91.4
Q ss_pred HhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEE--EEEecC--
Q 012318 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGT--VLNADF-- 208 (466)
Q Consensus 133 ~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~--vv~~d~-- 208 (466)
-++..++.|+... +..|+..|..+ ++|-..|...+ ..+.+ +|+.++.. ...+|+
T Consensus 10 l~~~n~~~i~~~~---------g~~t~Lgi~~~-~~lvP~Ha~~~---------~~i~i---~g~~v~i~d~~~l~d~~g 67 (180)
T 1cqq_A 10 LIKHNSCVITTEN---------GKFTGLGVYDR-FVVVPTHADPG---------KEIQV---DGITTKVIDSYDLYNKNG 67 (180)
T ss_dssp HHHHHEEEEEETT---------EEEEEEEEEBT-EEEEEGGGCCC---------SEEEE---TTEEEEEEEEEEEECTTS
T ss_pred HHHhCeEEEEEcC---------CcEEEEEEeeE-EEEEccCcCcc---------cEEEE---CCEEEEeccceEEEcCCC
Confidence 4455667777543 33788888877 99999999876 23322 44444322 223343
Q ss_pred -CCCEEEEEeCCCCCCCccc-cCCCCCCCCCCEEEEEecCCCCCC-ceEEeEEeeeecCccCCCCCCccccEEEEcccCC
Q 012318 209 -HSDIAIVKINSKTPLPAAK-LGTSSKLCPGDWVVAMGCPHSLQN-TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAIN 285 (466)
Q Consensus 209 -~~DlAlLkv~~~~~~~~~~-l~~s~~~~~G~~V~~iG~p~~~~~-~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~ 285 (466)
..||+|++++....++-++ +-. .........+++-.-..... .+..|.+....... . .+......+.+++++.
T Consensus 68 ~~~El~lv~l~~~~kfrDi~kfip-~~~~~~~~~~l~~n~~~~~~~~v~~g~~~~~g~i~--~-~g~~~~r~l~Y~~pT~ 143 (180)
T 1cqq_A 68 IKLEITVLKLDRNEKFRDIRRYIP-NNEDDYPNCNLALLANQPEPTIINVGDVVSYGNIL--L-SGNQTARMLKYSYPTK 143 (180)
T ss_dssp CEEEEEEEEECSSCCBCCGGGGSC-SSCCCEEEEEEEECTTSSSCEEEEEEEEEECCCEE--E-TTEEECSEEEECCCCC
T ss_pred CeEEEEEEEcCCccccCccHhhcC-CCcCCCCceEEEEEcCCCceEEEEccceeeeeeEe--c-CCcEeccEEEecCCCC
Confidence 3699999999765554333 211 12211123444433332333 24445443322111 1 1222346889999999
Q ss_pred CCCccceeecCCCeEEEEEEeEecCCCeeeEEEe
Q 012318 286 AGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVP 319 (466)
Q Consensus 286 ~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip 319 (466)
.|+=||+|+ ..|+++|||.++ . .+.+|+.+
T Consensus 144 ~G~CGsvl~-~~gkIiGIHvAG-~--G~~G~aa~ 173 (180)
T 1cqq_A 144 SGYCGGVLY-KIGQVLGIHVGG-N--GRDGFSAM 173 (180)
T ss_dssp TTCTTCEEE-ETTEEEEEEEEE-C--SSCEEEEE
T ss_pred CCcCCCeEE-ECCCEEEEEECC-C--CCcEEEee
Confidence 999999999 457999999987 2 34566654
No 329
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=97.33 E-value=0.0053 Score=55.07 Aligned_cols=154 Identities=14% Similarity=0.218 Sum_probs=89.0
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEE--EEEEecC---
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEG--TVLNADF--- 208 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a--~vv~~d~--- 208 (466)
++..++.|.+.. +.-||+.|..+ +.|...|.... ..+.+ +|+.+.. .....|.
T Consensus 11 ~k~n~~~i~t~~---------g~~t~LgI~d~-~~vvP~Ha~~~---------~~i~i---~g~~~~v~d~~~l~~~~~~ 68 (182)
T 2b0f_A 11 LRKNIMTITTSK---------GEFTGLGIHDR-VCVIPTHAQPG---------DDVLV---NGQKIRVKDKYKLVDPENI 68 (182)
T ss_dssp HHHHEEEEEETT---------EEEEEEEEEBT-EEEEESTTCCC---------SEEEE---TTEEEEEEEEEEEEETTTE
T ss_pred HhcCEEEEEeCC---------ccEEEEEEeee-EEEEecCCCCc---------cEEEE---CCEEEEeeeeeEEEcCCCC
Confidence 344567776433 33588889877 99999999664 33422 4544321 2222232
Q ss_pred CCCEEEEEeCCCCCCCccc--cCCCCCCCCCCEEEEEecCCCCCC-ceEEeEEeeeecCccCCCCCCccccEEEEcccCC
Q 012318 209 HSDIAIVKINSKTPLPAAK--LGTSSKLCPGDWVVAMGCPHSLQN-TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAIN 285 (466)
Q Consensus 209 ~~DlAlLkv~~~~~~~~~~--l~~s~~~~~G~~V~~iG~p~~~~~-~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~ 285 (466)
..||++++++....++-++ +.+.... . ..+.+-+-...+. .+..|.+...... . + .+......+.+++++.
T Consensus 69 ~~eltlv~l~~~~kfRDIrkfi~~~~~~-~--~~~lv~n~~~~p~~~~~vg~~~~~g~i-~-l-~G~~t~~~~~Y~~pTk 142 (182)
T 2b0f_A 69 NLELTVLTLDRNEKFRDIRGFISEDLEG-V--DATLVVHSNNFTNTILEVGPVTMAGLI-N-L-SSTPTNRMIRYDYATK 142 (182)
T ss_dssp EEEEEEEEECCSSCBCCGGGTBCSSCCC-S--EEEEEEESSSCEEEEEEEEEEEEEEEE-E-E-TTEEEEEEEEEESCCC
T ss_pred eeEEEEEECCCcccccchHHhcCCCCCC-C--ceEEEEEcCCCceEEEEecceEEeceE-c-C-CCcEecceEEeccCCC
Confidence 5799999998764443322 2221111 1 3333333333232 2345544332221 1 1 1223456788999999
Q ss_pred CCCccceeecCCCeEEEEEEeEecCCCeeeEEEe
Q 012318 286 AGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVP 319 (466)
Q Consensus 286 ~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip 319 (466)
.|.=||||+. .|+++|||.++. ...+|+.+
T Consensus 143 ~G~CGgvl~~-~gkIlGIHvaG~---G~~Gfaa~ 172 (182)
T 2b0f_A 143 TGQCGGVLCA-TGKIFGIHVGGN---GRQGFSAQ 172 (182)
T ss_dssp TTCTTCEEEE-TTEEEEEEEEEE---TTEEEEEE
T ss_pred CcccCCeEEe-CCCEEEEEeCCC---CCceEehh
Confidence 9999999994 889999999972 34566654
No 330
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.09 E-value=7.9e-05 Score=75.62 Aligned_cols=53 Identities=13% Similarity=0.255 Sum_probs=0.0
Q ss_pred eecccCCCChhhhCCCCCCCEEEEECCEecC--CHHHHHHHHhcCCCCeEEEEEEE
Q 012318 394 LVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 447 (466)
Q Consensus 394 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R 447 (466)
+|..|.++|+|+++||++||+|++|||++|. +++++..+|.. .++.+.|+|.+
T Consensus 318 ~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~-~~~~v~L~V~p 372 (388)
T 3suz_A 318 IICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSN-SVGEIHMKTMP 372 (388)
T ss_dssp --------------------------------------------------------
T ss_pred EEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEe
Confidence 7889999999999999999999999999997 46777777765 45678888876
No 331
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=97.02 E-value=0.0068 Score=55.85 Aligned_cols=160 Identities=18% Similarity=0.167 Sum_probs=88.8
Q ss_pred eeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEE---EEEE----EecC---CCCEEEEEeCCCCCCCc
Q 012318 156 IGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFE---GTVL----NADF---HSDIAIVKINSKTPLPA 225 (466)
Q Consensus 156 ~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~---a~vv----~~d~---~~DlAlLkv~~~~~~~~ 225 (466)
..+|+.|-.+ ++|...|..... ...+.+ +++.+. ..+. ..+. ..||++++++....++-
T Consensus 31 ~~~~LgI~~r-~~l~P~H~~~~~-------~~~i~i---~g~~~~~~~~~~~~~e~~v~~~~~~~Dl~~~~l~~~~kfrd 99 (209)
T 2bhg_A 31 ICCATGVFGT-AYLVPRHLFAEK-------YDKIML---DGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNKVRD 99 (209)
T ss_dssp EEEEEEEEBT-EEEEEHHHHTSC-------CSEEEE---TTEEECGGGEEEECCEECCSSSCEECSEEEEEESSSCCBCC
T ss_pred EEEEeeEcCC-EEEEEcccCCCC-------CcEEEE---cCEEEEeeeeEEeeceeeecCCCCceeEEEEECCCCcccCc
Confidence 4677788766 999999998652 134444 233332 1222 2333 37999999986533322
Q ss_pred cc--cCCCCCCCCCCEEEEEecCCCCCCceEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCccceeec---CCCeE
Q 012318 226 AK--LGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVN---IDGEI 300 (466)
Q Consensus 226 ~~--l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd---~~G~V 300 (466)
++ |.+......++.+..+-++......+..|.+......... ..+.....++.+++++..|+=||+|+- ..|++
T Consensus 100 i~k~f~~~~~~~~~~~~~~~~n~~~~~~~~~~g~~~~~~~~~~~-~~G~~~~~~~~Y~~pT~~G~CGs~lv~~~~~~~kI 178 (209)
T 2bhg_A 100 ITKHFRDTARMKKGTPVVGVVNNADVGRLIFSGEALTYKDIVVS-MDGDTMPGLFAYKAATRAGYAGGAVLAKDGADTFI 178 (209)
T ss_dssp CGGGBCSSCEECTTCEEEEEEEETTTEEEEEEEEESSCEECCC------CCTTEEEEECCCCTTCTTCEEEEEETTEEEE
T ss_pred hhhhcccccccCCCCeEEEEeccCccCceeeeeeEEEccceeee-cCCCccccEEEEcCCCCCCcCCCEEEEecCCCceE
Confidence 21 2221111344557766666544333334433222221100 112233568899999999999999963 35899
Q ss_pred EEEEEeEecCCCeeeEEEeHHHHHHHHH
Q 012318 301 VGINIMKVAAADGLSFAVPIDSAAKIIE 328 (466)
Q Consensus 301 VGI~~~~~~~~~g~~~aip~~~i~~~l~ 328 (466)
+|||.++. ...|++-.|+-+.+..+.+
T Consensus 179 vGIHvaG~-g~~G~aa~l~r~~~~~~~~ 205 (209)
T 2bhg_A 179 VGTHSAGG-NGVGYCSCVSRSMLQKMKA 205 (209)
T ss_dssp EEEEEEEE-TTEEEEEECCHHHHHHHHH
T ss_pred EEEEEccC-CCceEEEEcCHHHHHHHHH
Confidence 99999973 2234444455555554443
No 332
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=96.88 E-value=0.0037 Score=47.97 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=26.4
Q ss_pred CCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccC
Q 012318 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVD 177 (466)
Q Consensus 135 ~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~ 177 (466)
.|-.|.|... +...|.|.+|+++ +|||+|||+.+
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGslIs~~-~VLTAAHC~~~ 45 (80)
T 2pka_A 12 HPWQVAIYHY--------SSFQCGGVLVNPK-WVLTAAHCKND 45 (80)
T ss_dssp CTTEEEEEET--------TEEEEEEEEEETT-EEEECGGGCCS
T ss_pred CCcEEEEEEC--------CceEEEEEEEcCC-EEEECHHHCCC
Confidence 3667777532 2367999999988 99999999964
No 333
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=96.42 E-value=0.13 Score=55.24 Aligned_cols=158 Identities=16% Similarity=0.184 Sum_probs=87.5
Q ss_pred HhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEE--EEEEecC--
Q 012318 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEG--TVLNADF-- 208 (466)
Q Consensus 133 ~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a--~vv~~d~-- 208 (466)
-+...+|.|.+.. +.-+|..|..+ .+|+..|...+ ..+.+ +|..+.- ....++.
T Consensus 10 ~~~~n~~~~~~~~---------~~~~~l~i~~~-~~l~p~H~~~~---------~~~~i---~g~~~~~~~~~~~~~~~~ 67 (644)
T 2ijd_1 10 MAKRNIVTATTSK---------GEFTMLGVHDN-VAILPTHASPG---------ESIVI---DGKEVAILAAKALADQAG 67 (644)
T ss_dssp HHHHHEEEEEETT---------EEEEEEEEEBT-EEEEEGGGCCC---------SEEEE---TTEEEEEEECCEEECTTS
T ss_pred HHHcCEEEEEeCC---------cEEEEEEEece-EEEEccccCCC---------ceEEE---CCEEEEeccceeEEcCCC
Confidence 3444567776432 34678888877 99999998864 23332 2333221 1223344
Q ss_pred -CCCEEEEEeCCCCCCCccc-cCCCCCCCCCCEEEEEecCCCCCC-ceEEeEEeeeecCccCCCCCCccccEEEEcccCC
Q 012318 209 -HSDIAIVKINSKTPLPAAK-LGTSSKLCPGDWVVAMGCPHSLQN-TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAIN 285 (466)
Q Consensus 209 -~~DlAlLkv~~~~~~~~~~-l~~s~~~~~G~~V~~iG~p~~~~~-~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~ 285 (466)
..||++++++....++.++ +-. ..........++-...+... .+..|.+...... .. .+.....++.++.++.
T Consensus 68 ~~~dl~~~~~~~~~~frdi~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~-~~--~g~~~~~~~~y~~~T~ 143 (644)
T 2ijd_1 68 TNLEITIITLKRNEKFRDIRPHIP-TQITETNDGVLIVNTSKYPNMYVPVGAVTEQGYL-NL--GGRQTARTLMYNFPTR 143 (644)
T ss_dssp CEEEEEEEEECSSCCBCCCGGGSC-SSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEE-CC--TTSCEEEEEEECSCCC
T ss_pred CceeEEEEECCCCCCcCChHHhcc-CCccCCCceEEEEcCCCCceEEEEeeeeeeccce-ec--CCCccccEEEEcCCCC
Confidence 4699999998654443332 211 11112223333322222222 2234554432221 11 1223456788999999
Q ss_pred CCCccceeecCCCeEEEEEEeEecCCCeeeEEEeH
Q 012318 286 AGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPI 320 (466)
Q Consensus 286 ~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~aip~ 320 (466)
+|+=||||+. +|+|||||.++. + ..+|+.++
T Consensus 144 ~G~CG~~l~~-~gkIvGiHvaG~-g--~~g~a~~l 174 (644)
T 2ijd_1 144 AGQAGGVITC-TGKVIGMHVGGN-G--SHGFAAAL 174 (644)
T ss_dssp TTCTTCEEEE-TTEEEEEEEEEC-S--SCEEEEEC
T ss_pred CCCCCchhhh-CCcEEEEEEcCC-C--CceEEEEc
Confidence 9999999995 799999999873 2 34555543
No 334
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=95.92 E-value=0.013 Score=46.75 Aligned_cols=50 Identities=24% Similarity=0.338 Sum_probs=37.2
Q ss_pred cCCCCCccceeecCC-C--eEEEEEEeEecCC--CeeeEEEeHHHHHHHHHHHHH
Q 012318 283 AINAGNSGGPLVNID-G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (466)
Q Consensus 283 ~i~~G~SGGPlvd~~-G--~VVGI~~~~~~~~--~g~~~aip~~~i~~~l~~l~~ 332 (466)
..|.|+|||||+-.. | .++||++++.... ..-+.+.-+....+|+++..+
T Consensus 41 ~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 95 (97)
T 1yph_E 41 SSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLA 95 (97)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEHHHHHHHHHHHHH
T ss_pred CCCcCCCCCcEEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHhHHHHHHHHc
Confidence 578999999999432 2 7999999975422 234667888899999987654
No 335
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=94.41 E-value=1.2 Score=39.02 Aligned_cols=135 Identities=16% Similarity=0.191 Sum_probs=77.8
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCCEE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIA 213 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~DlA 213 (466)
+...|-+|.... .+.....|-|+.- +|.+=|=.||..++. + ..+++++ ....-|-..|++
T Consensus 17 l~dGvYRI~~~g----l~G~~Q~GVGv~~--~GVFHTmWHVTrGa~---------L---~~~g~~l--~P~wasV~~Dli 76 (185)
T 2ggv_B 17 TTTGVYRIMTRG----LLGSYQAGAGVMV--EGVFHTLWATTKGAA---------L---MSGEGRL--DPYWGSVKEDRL 76 (185)
T ss_dssp CCSEEEEEEEEC----SSSEEEEEEEEEE--TTEEEECHHHHTTCC---------E---EETTEEE--CEEEEETTTTEE
T ss_pred CCCcEEEEEecc----ccccceeeeEEee--CCEEEeeeeecCcce---------E---EECCcEe--cceeehhhccee
Confidence 556778876543 2333455777765 589999999998852 2 1233332 122334455653
Q ss_pred EEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCcc
Q 012318 214 IVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSG 290 (466)
Q Consensus 214 lLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SG 290 (466)
..-. +-+|. ....-+++|.++.++.+.... ...|++.-. . .++-.+....-.|.||
T Consensus 77 --sYGG-----~WkL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~~----------~--GeigAI~lD~p~GTSG 135 (185)
T 2ggv_B 77 --CYGG-----PWQLQ--HKWNGQDEVQMIVVEPGRNVKNVQTKPGVFKTP----------E--GEIGAVTLDFPTGTSG 135 (185)
T ss_dssp --EESS-----SCCCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEET----------T--EEEEEECCCCCGGGTT
T ss_pred --ecCC-----cccCc--cccCCCceEEEEEECCCCceEEEEccCceEecC----------C--CeEEEEECCCCCCCCC
Confidence 3332 12231 233445777788777664422 222333211 0 1233444466789999
Q ss_pred ceeecCCCeEEEEEEeEec
Q 012318 291 GPLVNIDGEIVGINIMKVA 309 (466)
Q Consensus 291 GPlvd~~G~VVGI~~~~~~ 309 (466)
+|++|.+|+|||+.-.+.-
T Consensus 136 SPIin~~G~vvGLYGNGv~ 154 (185)
T 2ggv_B 136 SPIVDKNGDVIGLYGNGVI 154 (185)
T ss_dssp CEEECTTSCEEEEEEEEEE
T ss_pred CceEcCCCcEEEEecceEE
Confidence 9999999999999877643
No 336
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=94.35 E-value=0.57 Score=40.60 Aligned_cols=133 Identities=17% Similarity=0.203 Sum_probs=73.0
Q ss_pred hCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCCEE
Q 012318 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIA 213 (466)
Q Consensus 134 ~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~DlA 213 (466)
+...|-+|.... .+.....|-|+.- +|.+=|=.||-.++. + ..+++.+ ....-|-..|++
T Consensus 3 l~dGvYRI~~~g----l~g~~Q~GVGv~~--~GVFHTmWHVTrGa~---------l---~~~g~~~--~P~wa~V~~Dli 62 (172)
T 2fp7_B 3 TTTGVYRIMTRG----LLGSYQAGAGVMV--EGVFHTLWHTTKGAA---------L---MSGEGRL--DPYWGSVKEDRL 62 (172)
T ss_dssp -CCEEEEEEC---------CCEEEEEEEE--TTEEEEEHHHHTTCC---------E---EETTEEE--CEEEEETTTTEE
T ss_pred CCCcEEEEEecc----ccccceeeeEEee--CCEEEeeeeecCCce---------E---EECCcEe--cceeehheecee
Confidence 345666765433 2334456777766 589999999998852 2 1233332 122334455653
Q ss_pred EEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCcc
Q 012318 214 IVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSG 290 (466)
Q Consensus 214 lLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SG 290 (466)
..-. +-+|. ....-+++|.++.++.+.... ...|++.-. . .++-.+....-.|.||
T Consensus 63 --sYGG-----~WkL~--~kW~g~~eVql~a~~Pgk~~~n~qt~Pg~f~~~----------~--GeigaI~lD~p~GtSG 121 (172)
T 2fp7_B 63 --CYGG-----PWKLQ--HKWNGHDEVQMIVVEPGKNVKNVQTKPGVFKTP----------E--GEIGAVTLDYPTGTSG 121 (172)
T ss_dssp --EESS-----SCCCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEET----------T--EEEEEECCCCCGGGTT
T ss_pred --ecCC-----ccccC--cccCCCceEEEEEECCCCceEEEEccCceEecC----------C--CeEEEEECCCCCCCCC
Confidence 3332 12231 233345677777777664422 222333211 0 1233344466789999
Q ss_pred ceeecCCCeEEEEEEeE
Q 012318 291 GPLVNIDGEIVGINIMK 307 (466)
Q Consensus 291 GPlvd~~G~VVGI~~~~ 307 (466)
+|++|.+|+|||+.-.+
T Consensus 122 SPIin~~G~vVGLYGNG 138 (172)
T 2fp7_B 122 SPIVDKNGDVIGLYGNG 138 (172)
T ss_dssp CEEECTTSCEEEESCCE
T ss_pred CceEccCCcEEEEecce
Confidence 99999999999997555
No 337
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=93.56 E-value=2.5 Score=36.02 Aligned_cols=141 Identities=18% Similarity=0.196 Sum_probs=76.2
Q ss_pred ceeEEEEEeCCCeEEeccccccCCC-CCCCCCCceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCC--CCCCccccCCC
Q 012318 155 GIGSGAIVDADGTILTCAHVVVDFH-GSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK--TPLPAAKLGTS 231 (466)
Q Consensus 155 ~~GSGfiI~~~G~ILT~aHvv~~~~-~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~--~~~~~~~l~~s 231 (466)
+.|=||.|++. .++|+-||+.... .....+-..+.| +..-++..+++..+ .++.-..|..
T Consensus 15 gsgwgfwVS~~-~fiTaTHV~p~~~~eifG~p~~~i~v---------------~~~GEf~~~rfp~~~rpdvsgmiLEe- 77 (185)
T 4ash_A 15 GTGWGFWVSGH-VFITAKHVAPPKGTEIFGRKPGDFTV---------------TSSGDFLKYYFTSAVRPDIPAMVLEN- 77 (185)
T ss_dssp TTEEEEESSSS-EEEEEGGGSCCTTCCBTTBCTTSEEE---------------EEETTEEEEEESSCSCTTSCCCEECS-
T ss_pred cCceEEEEccc-EEEEEEeecCCCchhhcCCccceEEE---------------eecCcEEEEEcCCCcCCCCcceEEec-
Confidence 44779999988 9999999995432 111122233333 33447888888764 3455555533
Q ss_pred CCCCCCCEEEEEe-cCCCC--CCceEEeEEeeeecCccCCCCCCccccEEE-------EcccCCCCCccceeecCCC---
Q 012318 232 SKLCPGDWVVAMG-CPHSL--QNTVTAGIVSCVDRKSSDLGLGGMRREYLQ-------TDCAINAGNSGGPLVNIDG--- 298 (466)
Q Consensus 232 ~~~~~G~~V~~iG-~p~~~--~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~-------~~~~i~~G~SGGPlvd~~G--- 298 (466)
....|.-+.++= .+.+. +..+..|.+......-... +....++. .|-...+|+-|.|-+-..|
T Consensus 78 -g~peGtV~svlikR~sgeliPlavRmgt~as~kIqGk~v---~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgn~~ 153 (185)
T 4ash_A 78 -GCQEGVVASVLVKRASGEMLALAVRMGSQAAIKIGSAVV---HGQTGMLLTGSNAKAQDLGTIPGDAGCPYVYKKGNTW 153 (185)
T ss_dssp -SCCTTCEEEEEEECTTCCEEEEEEEEEEEEEEEETTEEE---EEEEEEECC-------CCSCCTTCTTCEEEEEETTEE
T ss_pred -CCCCCcEEEEEEecCCCCcceeEEEecceeeeEEeeeEe---cceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCce
Confidence 334477665542 22222 1233334433322111000 00111222 2445689999999985443
Q ss_pred eEEEEEEeEecCCCeeeE
Q 012318 299 EIVGINIMKVAAADGLSF 316 (466)
Q Consensus 299 ~VVGI~~~~~~~~~g~~~ 316 (466)
-|+|++.........+--
T Consensus 154 vv~GVHtAatr~gNtVic 171 (185)
T 4ash_A 154 VVIGVHVAATRSGNTVIA 171 (185)
T ss_dssp EEEEEEEEECSSSSEEEE
T ss_pred EEEEEEEeeccCCCEEEE
Confidence 699999987655444433
No 338
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=93.46 E-value=0.088 Score=47.58 Aligned_cols=40 Identities=20% Similarity=0.339 Sum_probs=31.9
Q ss_pred EEcccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEEE
Q 012318 279 QTDCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAV 318 (466)
Q Consensus 279 ~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~ai 318 (466)
.-...-.+|+||-|+||-.|+||+|+..+..++....+.|
T Consensus 195 vp~G~G~~GDSGRpI~DN~GrVVaIVLGGanEG~RTaLSV 234 (253)
T 2yew_A 195 IPTGSGKPGDSGRPIFDNTGKVVAIVLGGANEGARTALSV 234 (253)
T ss_dssp EETTSCCSSCTTCEEECSSCBEEEEEEEEEECSSEEEEEE
T ss_pred cccCCCCCCCCCCccccCCCcEEEEEecCCCcCCceeEEE
Confidence 3445567899999999999999999999987766655443
No 339
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=93.45 E-value=0.17 Score=41.87 Aligned_cols=38 Identities=21% Similarity=0.344 Sum_probs=30.6
Q ss_pred EEcccCCCCCccceeecCCCeEEEEEEeEecCCCeeeE
Q 012318 279 QTDCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSF 316 (466)
Q Consensus 279 ~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~ 316 (466)
.-.....+|+||-|++|..|+||+|+..+..++.....
T Consensus 99 vp~g~g~~GdSGrPi~Dn~GrVVaIVlGG~neG~RtaL 136 (158)
T 4agk_A 99 IPTGAGGPGDSGRPILDNSGKVVAIVLGGANEGARTAL 136 (158)
T ss_dssp EETTSSCTTCTTCEEECTTSCEEEEEEEEEECSSEEEE
T ss_pred eecccCCCCCCCCccccCCCCEEEEEecCCCcCceeeE
Confidence 34556689999999999999999999998776655443
No 340
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=93.30 E-value=0.2 Score=41.06 Aligned_cols=40 Identities=20% Similarity=0.315 Sum_probs=31.5
Q ss_pred EEEcccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEE
Q 012318 278 LQTDCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFA 317 (466)
Q Consensus 278 i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~a 317 (466)
......-.+|+||-|++|..|+||+|+..+..+.......
T Consensus 90 tvp~G~g~~GdSGrpI~Dn~GrVVaIVlGG~~eg~rtaLS 129 (149)
T 1vcp_A 90 TIPTGAGKPGDSGRPIFDNKGRVVAIVLGGANEGSRTALS 129 (149)
T ss_dssp EEETTSCCTTCTTCEEECTTSCEEEEEEEEEECSSEEEEE
T ss_pred EecccCCCCCCCCCccCcCCCcEEEEEecCCCCCCceeEE
Confidence 3445556799999999999999999999988766555443
No 341
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=93.19 E-value=0.28 Score=54.70 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=49.3
Q ss_pred ceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCC-cEEEEEEEEe-cCCCCEEEEEeCCC-CCCCccccCCC
Q 012318 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG-RTFEGTVLNA-DFHSDIAIVKINSK-TPLPAAKLGTS 231 (466)
Q Consensus 155 ~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g-~~~~a~vv~~-d~~~DlAlLkv~~~-~~~~~~~l~~s 231 (466)
..|.+.+|++. ||+|.+|.... -.|.|.++ ..|.. +... .+..|+++.|+... ....|+.+...
T Consensus 56 ~~G~aTLI~pq-YiVSvaHn~gy-----------~~v~fG~~~n~Y~i-V~rnn~~~~Dy~~pRL~K~VTEvaP~~~t~~ 122 (1048)
T 1wxr_A 56 EIGVATLINPQ-YIASVKHNGGY-----------TNVSFGDGENRYNI-VDRNNAPSLDFHAPRLDKLVTEVAPTAVTAQ 122 (1048)
T ss_dssp TTCCCEEEETT-EEEBCTTCCSC-----------CEECCTTSCCCEEE-EECCBCSSSSCBCCEESSCCCSSCCCCBCSS
T ss_pred CCceEEEEcCc-EEEEeeecCCC-----------ceEEeCCCcceEEE-EeeCCCCCCCeeeeecccccccccceeeccc
Confidence 44888899998 99999995432 23555544 35644 2222 23469999999864 33444444322
Q ss_pred C-------CCCCCCEEEEEecCC
Q 012318 232 S-------KLCPGDWVVAMGCPH 247 (466)
Q Consensus 232 ~-------~~~~G~~V~~iG~p~ 247 (466)
. ........+.+|...
T Consensus 123 g~~~~~y~d~ery~~f~RvGsG~ 145 (1048)
T 1wxr_A 123 GAVAGAYLDKERYPVFYRLGSGT 145 (1048)
T ss_dssp CSCTTGGGCTTTCCCEEEEECSC
T ss_pred cCccccccccccCceEEEECCcE
Confidence 1 235566778888653
No 342
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=93.16 E-value=0.12 Score=42.99 Aligned_cols=39 Identities=15% Similarity=0.300 Sum_probs=31.0
Q ss_pred EEcccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEE
Q 012318 279 QTDCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFA 317 (466)
Q Consensus 279 ~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~a 317 (466)
.....-.+|+||-|++|-.|+||+|+..+..+.......
T Consensus 100 vp~GvG~~GDSGRpI~DN~GrVVaivlgg~~eg~rtaLS 138 (161)
T 1svp_A 100 IPRGVGGRGDAGRPIMDNSGRVVAIVLGGADEGTRTALS 138 (161)
T ss_dssp EETTSCCTTCTTCEEECTTSCEEEEEEEEEECSSEEEEE
T ss_pred ecccCCCCCCCCCccCcCCCcEEEEEecCCCCCCceeEE
Confidence 344456799999999999999999999988776555443
No 343
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=93.11 E-value=0.18 Score=41.78 Aligned_cols=40 Identities=20% Similarity=0.333 Sum_probs=31.3
Q ss_pred EEEcccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEE
Q 012318 278 LQTDCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFA 317 (466)
Q Consensus 278 i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~a 317 (466)
......-.+|+||-|++|..|+||+|+..+..+.......
T Consensus 97 tip~G~g~~GdSGrpI~Dn~GrVVaIVlGGa~eg~rtaLS 136 (157)
T 1ep5_B 97 TVPKGVGAKGDSGRPILDNQGRVVAIVLGGVNEGSRTALS 136 (157)
T ss_dssp EEETTCCCTTCTTCEEECTTSCEEEEEEEEEEETTEEEEE
T ss_pred EeccCCCCCCCCCCccCcCCCcEEEEEecCCCCCCceeEE
Confidence 3445566899999999999999999999987765554443
No 344
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=92.72 E-value=0.11 Score=47.41 Aligned_cols=39 Identities=18% Similarity=0.309 Sum_probs=31.2
Q ss_pred EEcccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEE
Q 012318 279 QTDCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFA 317 (466)
Q Consensus 279 ~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~a 317 (466)
.-...-.+|+||-|+||-.|+||+|+..+..++....+.
T Consensus 205 vp~G~G~~GDSGRpI~DN~GrVVaIVLGGaneG~RTaLS 243 (264)
T 1kxf_A 205 IPRGVGGRGDSGRPIMDNSGRVVAIVLGGADEGTRTALS 243 (264)
T ss_dssp EETTSCCTTCTTCEEECTTSCEEEEEEEEEEETTEEEEE
T ss_pred ecccCCCCCCCCCccccCCCcEEEEEecCCCcCCceeEE
Confidence 344556789999999999999999999998776655444
No 345
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=92.22 E-value=0.23 Score=43.86 Aligned_cols=135 Identities=18% Similarity=0.199 Sum_probs=78.5
Q ss_pred HhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCCE
Q 012318 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDI 212 (466)
Q Consensus 133 ~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~Dl 212 (466)
.+...|-+|....- +.....|-|+.- +|.+=|=+||..++. + . .+++.+ ....-|-..|+
T Consensus 21 ~l~dGVYRI~~~gl----~G~~Q~GVGv~k--~GVFHTMWHVTrGa~---------l--~-~~g~~l--~P~WasV~~Dl 80 (198)
T 3e90_B 21 DTTTGVYRIMTRGL----LGSYQAGAGVMV--EGVFHTLWHTTKGAA---------L--M-SGEGRL--DPYWGSVKEDR 80 (198)
T ss_dssp CCCSEEEEEEEEET----TEEEEEEEEEEE--TTEEEECHHHHTTCC---------E--E-ETTEEE--CEEEEETTTTE
T ss_pred cCCCceEEEEeccc----cccceeeeEEee--CCEEEeeeeecCcce---------E--E-ECCcEe--cceeehheece
Confidence 45567888876442 333355777665 589999999998852 2 1 233332 12233445565
Q ss_pred EEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCc
Q 012318 213 AIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNS 289 (466)
Q Consensus 213 AlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~S 289 (466)
+ ..-. +-+|. ....-.++|.++.++.+.... ...|++.-.. .++-.+....-.|.|
T Consensus 81 i--sYGG-----~WkL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~~------------g~iGaV~lD~p~GTS 139 (198)
T 3e90_B 81 L--CYGG-----PWKLQ--HKWNGQDEVQMIVVEPGKNVKNVRTKPGVFKTPE------------GEIGAVTLDFPTGTS 139 (198)
T ss_dssp E--EESS-----SCCCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEETT------------EEEEEECCCCCTTCT
T ss_pred e--ecCC-----cccCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcCC------------CeEEEEECCCCCCCC
Confidence 3 3332 12332 122223778888888765532 3344442110 123344455679999
Q ss_pred cceeecCCCeEEEEEEeEe
Q 012318 290 GGPLVNIDGEIVGINIMKV 308 (466)
Q Consensus 290 GGPlvd~~G~VVGI~~~~~ 308 (466)
|+|++|.+|+|||+.-.+.
T Consensus 140 GSPIin~~G~VVGLYGNGv 158 (198)
T 3e90_B 140 GSPIVDKNGDVIGLYGNGV 158 (198)
T ss_dssp TCEEECTTCCEEEECCCEE
T ss_pred CCceecCCCcEEEEecceE
Confidence 9999999999999975544
No 346
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=91.96 E-value=0.29 Score=43.12 Aligned_cols=135 Identities=19% Similarity=0.261 Sum_probs=78.1
Q ss_pred HhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCCE
Q 012318 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDI 212 (466)
Q Consensus 133 ~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~Dl 212 (466)
.+...|-+|....- +.....|-|+.- +|.+=|=.||..++. + . .+++.+ ....-|-..|+
T Consensus 26 ~~~dGVYRI~~~gl----~G~~Q~GVGv~k--~GVFHTMWHVTrGa~---------l--~-~~g~~l--~P~wasV~~Dl 85 (191)
T 3u1j_B 26 ELEEGVYRIKQQGI----FGKTQVGVGVQK--EGVFHTMWHVTRGAV---------L--T-HNGKRL--EPNWASVKKDL 85 (191)
T ss_dssp CCCSEEEEEEEEET----TEEEEEEEEEEE--TTEEEEEHHHHTTCC---------E--E-ETTEEE--CEEEEETTTTE
T ss_pred cCCCceEEEEeccc----cccceeeeEEee--CCEEEeeeeecCcce---------E--E-ECCcEe--cceeecceece
Confidence 45567888876442 233355667665 589999999998852 2 1 233332 12233445565
Q ss_pred EEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCc
Q 012318 213 AIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNS 289 (466)
Q Consensus 213 AlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~S 289 (466)
+ ..-. +-+|.. .-.-.++|.++.++.+.... ...|++.-. . .++-.+....-.|.|
T Consensus 86 i--sYGG-----~WkL~~--~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~----------~--g~iGaV~lD~p~GTS 144 (191)
T 3u1j_B 86 I--SYGG-----GWRLSA--QWQKGEEVQVIAVEPGKNPKNFQTMPGTFQTT----------T--GEIGAIALDFKPGTS 144 (191)
T ss_dssp E--EESS-----SCCCCC--CCCTTCCEEEEECCTTSCCEEEEECCEEEECS----------S--CEEEEECCCCCTTCT
T ss_pred e--ecCC-----cccCCc--ccCCCceEEEEEECCCCceEEEEeCCeEEEcC----------C--CeEEEEECCCCCCCC
Confidence 3 3332 122311 22233778888887765432 334444211 1 123344455679999
Q ss_pred cceeecCCCeEEEEEEeEe
Q 012318 290 GGPLVNIDGEIVGINIMKV 308 (466)
Q Consensus 290 GGPlvd~~G~VVGI~~~~~ 308 (466)
|+|++|.+|+|||+.-.+.
T Consensus 145 GSPIin~~G~VVGLYGNG~ 163 (191)
T 3u1j_B 145 GSPIINREGKVVGLYGNGV 163 (191)
T ss_dssp TCEEECTTSCEEEECCBEE
T ss_pred CCceecCCCcEEEEecCeE
Confidence 9999999999999975554
No 347
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=91.96 E-value=0.23 Score=43.69 Aligned_cols=135 Identities=21% Similarity=0.254 Sum_probs=76.9
Q ss_pred HHhCCceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCC
Q 012318 132 ARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSD 211 (466)
Q Consensus 132 ~~~~~SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~D 211 (466)
..+...|-+|.... .+.....|-|+.- +|.+=|=.||-.++. + . .+++++ ....-|-..|
T Consensus 16 ~~l~dGvYRI~~~g----l~G~~Q~GVGv~~--~GVFHTmWHVTrGa~---------l--~-~~g~~l--~P~wa~V~~D 75 (185)
T 2fom_B 16 AELEDGAYRIKQKG----ILGYSQIGAGVYK--EGTFHTMWHVTRGAV---------L--M-HKGKRI--EPSWADVKKD 75 (185)
T ss_dssp --CCSEEEEEEEEE----TTEEEEEEEEEEE--TTEEEEEHHHHTTCC---------E--E-ETTEEE--CEEEEETTTT
T ss_pred ccCCCcEEEEEecc----ccccceeeeEEee--CCEEEeeeeecCcce---------E--E-ECCcEe--cceeehheec
Confidence 44778888887643 2333455777665 589999999998852 2 1 233332 1223344556
Q ss_pred EEEEEeCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEeEEeeeecCccCCCCCCccccEEEEcccCCCCC
Q 012318 212 IAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGN 288 (466)
Q Consensus 212 lAlLkv~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~ 288 (466)
++ ..-.+ -+|.. .-.-+++|.++.++.+.... ...|++.-. . .++-.+....-.|.
T Consensus 76 li--sYGG~-----WkL~~--kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~~----------~--GeigaI~lD~p~GT 134 (185)
T 2fom_B 76 LI--SYGGG-----WKLEG--EWKEGEEVQVLALEPGKNPRAVQTKPGLFKTN----------T--GTIGAVSLDFSPGT 134 (185)
T ss_dssp EE--EESSS-----CCCCC--CCCTTCCEEEEECCTTSCCEEEEECCEEEECS----------S--CEEEEECCCSCGGG
T ss_pred ee--ecCCc-----ccCcc--ccCCCceEEEEEECCCCceEEEEcCCceeecC----------C--CeEEEEECCCCCCC
Confidence 53 33321 22311 23335677777777664422 222332111 1 12334444667899
Q ss_pred ccceeecCCCeEEEEEEeE
Q 012318 289 SGGPLVNIDGEIVGINIMK 307 (466)
Q Consensus 289 SGGPlvd~~G~VVGI~~~~ 307 (466)
||+|++|.+|+|||+.-.+
T Consensus 135 SGSPIin~~G~vvGLYGNG 153 (185)
T 2fom_B 135 SGSPIVDKKGKVVGLYGNG 153 (185)
T ss_dssp TTCEEECTTSCEEEETTCE
T ss_pred CCCceEccCCcEEEEecce
Confidence 9999999999999997555
No 348
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=91.26 E-value=0.33 Score=44.08 Aligned_cols=131 Identities=18% Similarity=0.265 Sum_probs=75.6
Q ss_pred ceEEEEccccccccccCCceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCCEEEEE
Q 012318 137 AVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVK 216 (466)
Q Consensus 137 SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLk 216 (466)
.|-+|.... .+.....|-|+.- +|.+=|=.||..++. + . .+++.+ ....-|-..|++ .
T Consensus 71 GvYRI~~~g----l~G~~Q~GVGv~~--~GVFHTmWHVTrGa~---------l--~-~~g~~~--~P~wa~V~~Dli--s 128 (236)
T 3lkw_A 71 GIYRILQRG----LLGRSQVGVGVFQ--EGVFHTMWHVTRGAV---------L--M-YQGKRL--EPSWASVKKDLI--S 128 (236)
T ss_dssp EEEEEEEEE----TTEEEEEEEEEEE--TTEEEECHHHHTTCC---------E--E-ETTEEE--CEEEEETTTTEE--E
T ss_pred cEEEEEecc----ccccceeeeEEee--CCEEEEeeeecCcce---------E--E-ECCcEe--cceeehheecee--e
Confidence 777887543 2333355777665 589999999998852 2 1 233332 122334455653 3
Q ss_pred eCCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEeEEeeeecCccCCCCCCccccEEEEcccCCCCCcccee
Q 012318 217 INSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPL 293 (466)
Q Consensus 217 v~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl 293 (466)
.-.+ -+|.. .-.-.+.|.++.++.+.... ..+|++.-.. .++-.+....-.|.||+|+
T Consensus 129 YGG~-----WkL~~--~W~g~~eVqv~A~~Pg~~~~~~qt~PG~~~~~~------------g~igav~lD~p~GTSGSPI 189 (236)
T 3lkw_A 129 YGGG-----WRFQG--SWNAGEEVQVIAVEPGKNPKNVQTAPGTFKTPE------------GEVGAIALDFKPGTAGSPI 189 (236)
T ss_dssp ESSS-----CCCCC--CCCTTCCEEEEECCTTSCCEEEEECCEEEEETT------------EEEEEECCCCCTTCTTCEE
T ss_pred cCCC-----ccCCc--ccCCCceEEEEEECCCCceEEEEeCCeEEEcCC------------CeEEEEECCCCCCCCCCce
Confidence 3321 22311 22234778888887765532 3344442110 1233344456799999999
Q ss_pred ecCCCeEEEEEEeEe
Q 012318 294 VNIDGEIVGINIMKV 308 (466)
Q Consensus 294 vd~~G~VVGI~~~~~ 308 (466)
+|.+|+|||+.-.+.
T Consensus 190 in~~G~VvGLYGnG~ 204 (236)
T 3lkw_A 190 VNREGKIVGLYGNGV 204 (236)
T ss_dssp ECTTSCEEEESCCEE
T ss_pred ecCCCcEEEEecceE
Confidence 999999999975544
No 349
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=88.87 E-value=5.3 Score=34.17 Aligned_cols=144 Identities=17% Similarity=0.209 Sum_probs=75.7
Q ss_pred ceeEEEEEeCCCeEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCC--CCCCccccCCCC
Q 012318 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK--TPLPAAKLGTSS 232 (466)
Q Consensus 155 ~~GSGfiI~~~G~ILT~aHvv~~~~~~~~~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~--~~~~~~~l~~s~ 232 (466)
+.|=||.|++. .++|+-||+.... .++ | | .+-..+..+..-++..+++..+ .++.-+.|..
T Consensus 26 gsgwgfwVS~~-~fIT~tHV~p~~~-------~e~---f--G--~p~~~i~v~~~GEf~~~rfpk~~rpdvsgmiLEe-- 88 (194)
T 2fyq_A 26 GSGWGFWVSPT-VFITTTHVVPTGV-------KEF---F--G--EPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEE-- 88 (194)
T ss_dssp TTEEEEESSSS-EEEEEGGGSCSSC-------SEE---T--T--EEGGGEEEEEETTEEEEEESSCSCTTSCCCEECS--
T ss_pred cCceeEEEccc-EEEEEeeecCCCC-------hhh---c--C--ceeeeEEEeecCcEEEEEcCCCcCCCCcceEEec--
Confidence 44779999988 9999999995432 111 0 1 1112234444557888888764 3445555533
Q ss_pred CCCCCCEEEEE-ecCCCC--CCceEEeEEeeeecCccCCCCCCccccEEE-------EcccCCCCCccceeecCCC---e
Q 012318 233 KLCPGDWVVAM-GCPHSL--QNTVTAGIVSCVDRKSSDLGLGGMRREYLQ-------TDCAINAGNSGGPLVNIDG---E 299 (466)
Q Consensus 233 ~~~~G~~V~~i-G~p~~~--~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~-------~~~~i~~G~SGGPlvd~~G---~ 299 (466)
....|.-+.++ -.+.+. +..+..|.+......-... .....++. .|-...+|+-|.|-+-..| -
T Consensus 89 g~peGtV~silikR~sgellPlaVRmgt~as~kIqGk~v---~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgndwv 165 (194)
T 2fyq_A 89 GCPEGTVCSVLIKRDSGELLPLAVRMGAIASMRIQGRLV---HGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWV 165 (194)
T ss_dssp SCCTTCEEEEEEECTTSCEEEEEEEEEEEEEEEETTEEE---EEEEEEECC-----------CGGGTTCEEEEEETTEEE
T ss_pred CCCCCcEEEEEEecCCCCcceEEEEecceeeeEEeeeEe---cceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceE
Confidence 33447655543 233332 1234444443332211000 00111222 2345678999999995444 6
Q ss_pred EEEEEEeEecCCCeeeEEE
Q 012318 300 IVGINIMKVAAADGLSFAV 318 (466)
Q Consensus 300 VVGI~~~~~~~~~g~~~ai 318 (466)
|+|++.........+--++
T Consensus 166 v~GVH~AatrsgNtVica~ 184 (194)
T 2fyq_A 166 VCGVHAAATKSGNTVVCAV 184 (194)
T ss_dssp EEEEEEEECSSSSEEEEEC
T ss_pred EEEEEEeeccCCCEEEEEe
Confidence 9999998766554444444
No 350
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=65.00 E-value=11 Score=33.13 Aligned_cols=42 Identities=29% Similarity=0.420 Sum_probs=29.3
Q ss_pred cCCCCCccceeecCCCeEEEEEEeEecCC--CeeeEEEeHHHHH
Q 012318 283 AINAGNSGGPLVNIDGEIVGINIMKVAAA--DGLSFAVPIDSAA 324 (466)
Q Consensus 283 ~i~~G~SGGPlvd~~G~VVGI~~~~~~~~--~g~~~aip~~~i~ 324 (466)
....|.||||++=..|.+|||-....-.. -..-.++|++.+.
T Consensus 154 S~lkGSSGgPvLC~~GHaVGmf~aav~trGvakai~fvPve~l~ 197 (203)
T 3su6_A 154 SYLKGSAGGPLLCPAGHAVGIFRTAVSTRGVAKAVDFIPVESLE 197 (203)
T ss_dssp GGTTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEEEEHHHHH
T ss_pred eeccCCCCCceecCCCCEEEEEEEEEEcCceeeeEEEEEccccc
Confidence 45689999999988899999986543221 1123447988754
No 351
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=60.81 E-value=9.3 Score=40.02 Aligned_cols=51 Identities=18% Similarity=0.319 Sum_probs=35.3
Q ss_pred CCCCCCEEEEECCEecCCHHHHH----------------HHH-------hcC-CCCeEEEEEEECCCeEEEEEEE
Q 012318 408 GFLPSDVVIKFDGKPVQSITEII----------------EIM-------GDR-VGEPLKVVVQRANDQLVTLTVI 458 (466)
Q Consensus 408 Gl~~GD~I~~ing~~v~~~~~~~----------------~~l-------~~~-~g~~v~l~v~R~~g~~~~l~v~ 458 (466)
+++.||.|++|||+++..+-+-. +.| ... +.+.++|++.|.+|+.+++.+.
T Consensus 109 ~I~vGdEIlsING~pv~e~Lek~~~~~Gsn~~a~~~~Al~~Lt~R~~~l~~~~p~~~~tlk~~~~~G~~~~v~~p 183 (583)
T 3dor_A 109 EIRVGDELLEVDGAPVQDVLATLYGSNHKGTAAEESAALRTLFSRMASLGHKVPSGRTTLKIRRPFGTTREVRVK 183 (583)
T ss_dssp SSCTTCEEEEETTEEHHHHHHTTSCTTCCCCHHHHHHHHHHHTEEEGGGTCCCCCSEEEEEEECTTSCEEEEEEE
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHhcCCCcHHHHHHHHHHHhhhHHhhccCCCCCceEEEEECCCCcEEEEEee
Confidence 69999999999999986652211 112 111 2347889998888988877664
No 352
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=57.59 E-value=17 Score=26.99 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=30.6
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
+..+.|.+.+|+.|.+.+.++|...++.|=....
T Consensus 14 ~k~V~V~Lk~gr~~~G~L~~~D~~mNlvL~~~~e 47 (76)
T 3s6n_G 14 DKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE 47 (76)
T ss_dssp CCEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCeEEEEECCCcEEEEEEEEECCcceEEEeceEE
Confidence 4689999999999999999999999999887754
No 353
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=57.13 E-value=18 Score=26.76 Aligned_cols=34 Identities=24% Similarity=0.443 Sum_probs=30.4
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
...+.|.+.+|+.+.+.+.++|...++.|=.+..
T Consensus 14 ~~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 1h64_1 14 DKDVLVILKKGFEFRGRLIGYDIHLNVVLADAEM 47 (75)
T ss_dssp TSEEEEEETTSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEECCCCEEEEEEEEEeCCCCeEEeeEEE
Confidence 3689999999999999999999999999877653
No 354
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=56.44 E-value=17 Score=28.00 Aligned_cols=34 Identities=29% Similarity=0.448 Sum_probs=30.5
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
+.++.|.+.+|+.+.+.+.++|...+|.|=....
T Consensus 14 ~k~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 47 (91)
T 1d3b_B 14 DYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (91)
T ss_dssp TSEEEEEETTCCEEEEEEEECCTTCCEEEEEEEE
T ss_pred CCcEEEEECCCeEEEEEEEEECCCCeEEecCEEE
Confidence 4689999999999999999999999999877653
No 355
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=56.23 E-value=20 Score=26.64 Aligned_cols=34 Identities=32% Similarity=0.549 Sum_probs=30.4
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
...+.|.+.+|+.+.+.+.++|...++.|=.+..
T Consensus 14 ~~~V~V~L~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (77)
T 1i4k_A 14 KSPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEE 47 (77)
T ss_dssp TSEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEEcCCCEEEEEEEEEcCCCCeEEeeEEE
Confidence 3689999999999999999999999999877653
No 356
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=55.03 E-value=20 Score=26.98 Aligned_cols=33 Identities=18% Similarity=0.285 Sum_probs=30.1
Q ss_pred ceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 187 GKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 187 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
..+.|.+.+|+.+.+.+.++|...++.|=.+..
T Consensus 20 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 52 (81)
T 1th7_A 20 NLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEE 52 (81)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCCEEEccEEE
Confidence 689999999999999999999999999887763
No 357
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=53.15 E-value=20 Score=26.57 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=29.7
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~ 218 (466)
+..+.|.+.+|+.|.+++.++|...++.|=.+.
T Consensus 14 ~k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~ 46 (75)
T 4emk_B 14 GKKVLIRLSSGVDYKGILSCLDGYMNLALERTE 46 (75)
T ss_dssp TSEEEEECTTSCEEEEEEEEECTTCEEEEEEEE
T ss_pred CCeEEEEEcCCcEEEEEEEEEcCcceEEEccEE
Confidence 368999999999999999999999999887665
No 358
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=53.04 E-value=24 Score=26.14 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=30.5
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
...+.|.+.+|+.|.+++..+|...++.|=.+..
T Consensus 15 g~~V~VeLk~g~~~~G~L~~~D~~MNl~L~~~~e 48 (75)
T 1d3b_A 15 GHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITV 48 (75)
T ss_dssp TSEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEECCCcEEEEEEEEEccceeEEEEeEEE
Confidence 3689999999999999999999999999887763
No 359
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=52.30 E-value=23 Score=26.78 Aligned_cols=34 Identities=21% Similarity=0.431 Sum_probs=30.4
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
+..+.|.+.+|+.+.+.+.++|...++.|=.+..
T Consensus 25 ~~~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 58 (83)
T 1mgq_A 25 NSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEE 58 (83)
T ss_dssp TSEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEEcCCcEEEEEEEEECCCceeEEccEEE
Confidence 3689999999999999999999999999877753
No 360
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=51.99 E-value=23 Score=27.71 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=29.8
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~ 218 (466)
+.+++|.+.+|+.|.+.+.++|...+|.|=.+.
T Consensus 30 ~k~V~V~Lk~gr~~~G~L~gfD~~mNlvL~d~~ 62 (94)
T 4emk_A 30 GSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVT 62 (94)
T ss_dssp TSEEEEEESSSEEEEEEEEEECTTCCEEEEEEE
T ss_pred CCeEEEEECCCcEEEEEEEEEcccCCeEeeeEE
Confidence 368999999999999999999999999987665
No 361
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=51.50 E-value=25 Score=26.86 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=29.9
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~ 218 (466)
+..+.|.+.+|+.|.+++.++|...++.|=.+.
T Consensus 16 ~k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~ 48 (86)
T 3s6n_F 16 GKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTE 48 (86)
T ss_dssp TSEEEEEETTSCEEEEEEEEECTTCCEEEEEEE
T ss_pred CCeEEEEEcCCeEEEEEEEEEcCceEEEEeeEE
Confidence 368999999999999999999999999887765
No 362
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=50.97 E-value=24 Score=27.41 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=30.4
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
+..+.|.+.+|+.|.+.+.++|...+|.|=.+..
T Consensus 19 ~~~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 52 (93)
T 4emg_A 19 DEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE 52 (93)
T ss_dssp TSEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEECCCcEEEEEEEEECCcccEEeecEEE
Confidence 3689999999999999999999999999877653
No 363
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=50.34 E-value=28 Score=25.77 Aligned_cols=34 Identities=9% Similarity=0.122 Sum_probs=30.3
Q ss_pred CceEEEEeCCC-cEEEEEEEEecCCCCEEEEEeCC
Q 012318 186 KGKVDVTLQDG-RTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 186 ~~~i~V~~~~g-~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
..++.|.+.+| +.+.+.+.++|...++.|=.+..
T Consensus 15 ~~~v~V~lk~g~~~~~G~L~~~D~~mNlvL~d~~e 49 (77)
T 1ljo_A 15 GKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAME 49 (77)
T ss_dssp TSEEEEEETTCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEEeCCCEEEEEEEEEECCcceEEEeeEEE
Confidence 36899999999 99999999999999999877763
No 364
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=49.52 E-value=26 Score=28.39 Aligned_cols=34 Identities=15% Similarity=0.349 Sum_probs=30.4
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
+..+.|.+.+|+.+.+.+.++|...+|.|=.+..
T Consensus 33 ~k~V~V~L~dGr~~~G~L~~fD~~mNLVL~d~~E 66 (113)
T 4emk_C 33 DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEE 66 (113)
T ss_dssp CSEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCcEEEEEeCCeEEEEEEEEEcCcccEEEeeEEE
Confidence 3689999999999999999999999999877653
No 365
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=49.02 E-value=38 Score=26.00 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=29.2
Q ss_pred CceEEEEeCCCcEEEEEEEEecC-CCCEEEEEeC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADF-HSDIAIVKIN 218 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~-~~DlAlLkv~ 218 (466)
..++.|.+.||+.|.+.+..+|| ...|.|+...
T Consensus 17 ~KeV~V~l~dg~~y~G~l~tvDp~s~sIvL~n~~ 50 (86)
T 1y96_A 17 YKEVRVTASEKNEYKGWVLTTDPVSANIVLVNFL 50 (86)
T ss_dssp TCEEEEEETTTEEEEEEEEEECTTTCCEEEEEEC
T ss_pred CCEEEEEEcCCCEEEEEEEEECCCceEEEEeecc
Confidence 47899999999999999999994 6799999874
No 366
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=47.71 E-value=23 Score=26.66 Aligned_cols=33 Identities=21% Similarity=0.331 Sum_probs=29.9
Q ss_pred ceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 187 GKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 187 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
..+.|.+.+|+.+.+.+..+|...++.|=.+..
T Consensus 22 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 54 (81)
T 1i8f_A 22 KQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEE 54 (81)
T ss_dssp SEEEEEEGGGEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCeeEEccEEE
Confidence 689999999999999999999999999877653
No 367
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=47.16 E-value=24 Score=27.63 Aligned_cols=33 Identities=27% Similarity=0.404 Sum_probs=30.1
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~ 218 (466)
+.++.|.+.+|+.+.+.+.++|...+|.|=...
T Consensus 20 ~k~V~V~Lk~gr~~~G~L~~fD~~mNlVL~d~~ 52 (96)
T 3bw1_A 20 DERVYIKLRGARTLVGTLQAFDSHCNIVLSDAV 52 (96)
T ss_dssp TSEEEEEEGGGCEEEEEEEEECTTCCEEEEEEE
T ss_pred CCeEEEEECCCcEEEEEEEEECCCCcEEEcCEE
Confidence 478999999999999999999999999987765
No 368
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=46.17 E-value=30 Score=28.10 Aligned_cols=33 Identities=15% Similarity=0.318 Sum_probs=30.1
Q ss_pred ceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 187 GKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 187 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
..+.|.+.+|+.|.+.+.++|.+.++.|=.+..
T Consensus 40 k~V~V~Lk~gr~~~G~L~~fD~~mNlvL~d~~E 72 (118)
T 1b34_B 40 TQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 72 (118)
T ss_dssp CEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred cEEEEEECCCcEEEEEEEEeCCceEEEEeCEEE
Confidence 589999999999999999999999999977763
No 369
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=44.09 E-value=22 Score=29.59 Aligned_cols=30 Identities=10% Similarity=0.298 Sum_probs=22.2
Q ss_pred ceeecCCCeEEEEEEeEecCCCeeeEEEeHHHHHHHHHHH
Q 012318 291 GPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQF 330 (466)
Q Consensus 291 GPlvd~~G~VVGI~~~~~~~~~g~~~aip~~~i~~~l~~l 330 (466)
.|+.|.+|++||+++.+ ++.+.+...+...
T Consensus 111 ~PV~~~~g~viGvv~vg----------~~~~~~~~~~~~~ 140 (142)
T 3by8_A 111 TPIYDENHKQIGVVAIG----------LELSRVTQQINDS 140 (142)
T ss_dssp EEEECTTSCEEEEEEEE----------EEHHHHHHHHHC-
T ss_pred EeEEcCCCCEEEEEEEe----------EEHHHHHHHHHHh
Confidence 58988789999998764 6677777666543
No 370
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A
Probab=43.18 E-value=25 Score=32.24 Aligned_cols=33 Identities=30% Similarity=0.460 Sum_probs=29.5
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~ 218 (466)
+.++.|.+.||+.|.+++..+|.+.+|.|=.+.
T Consensus 14 dKrV~V~LkdGRel~GtLkgFDq~MNLVL~Da~ 46 (231)
T 3pgw_B 14 DYRMRCILQDGRIFIGTFKAFDKHMNLILCDCD 46 (231)
T ss_pred CCeEEEEECCCcEEEEEEEEEcccccEEecCEE
Confidence 478999999999999999999999999886555
No 371
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=43.14 E-value=38 Score=26.98 Aligned_cols=33 Identities=24% Similarity=0.408 Sum_probs=30.0
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~ 218 (466)
...+.|.+.+|+.|.+++..+|...+|.|=.+.
T Consensus 26 gk~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~ 58 (105)
T 4emh_A 26 GRPILVELKNGETFNGHLENCDNYMNLTLREVI 58 (105)
T ss_dssp CCEEEEEETTSCEEEEEEEEECTTCCEEEEEEE
T ss_pred CCEEEEEECCCCEEEEEEEEEcCCceEEEEEEE
Confidence 368999999999999999999999999987765
No 372
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=41.77 E-value=38 Score=26.32 Aligned_cols=34 Identities=18% Similarity=0.329 Sum_probs=30.2
Q ss_pred CceEEEEeCCC-cEEEEEEEEecCCCCEEEEEeCC
Q 012318 186 KGKVDVTLQDG-RTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 186 ~~~i~V~~~~g-~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
+..+.|.+.+| +.|.+++.++|...++.|=.+..
T Consensus 31 ~k~V~V~Lk~g~~~~~G~L~~~D~~MNlvL~d~~E 65 (93)
T 1n9r_A 31 NHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEE 65 (93)
T ss_dssp TSEEEEEESSTTEEEEEEEEECCTTTCEEEEEEEE
T ss_pred CCEEEEEEcCCCEEEEEEEEEEccccEEEEeeEEE
Confidence 36899999999 99999999999999998877653
No 373
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=40.14 E-value=44 Score=27.21 Aligned_cols=61 Identities=18% Similarity=0.253 Sum_probs=40.7
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCCC-CCCccccCCCCCCCCCCEEEEEecCCC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKT-PLPAAKLGTSSKLCPGDWVVAMGCPHS 248 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~~l~~s~~~~~G~~V~~iG~p~~ 248 (466)
...+.|.+.+|..|.+.+..+|...++.|=.+.... .-....++. -+-.|+.|..+.-|..
T Consensus 12 gk~V~V~Lk~g~~~~G~L~~~D~~MNlvL~d~~e~~~~~~~~~lg~--v~IRG~nI~~I~~pd~ 73 (119)
T 1b34_A 12 HETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLET--LSIRGNNIRYFILPDS 73 (119)
T ss_dssp TCEEEEEETTCCEEEEEEEEECTTCCEEEEEEEEECTTSCCEEEEE--EEECGGGEEEEECCTT
T ss_pred CCEEEEEEcCCCEEEEEEEEEcccceEEeccEEEecCCCceeEcce--EEEcCCeEEEEEeccc
Confidence 368999999999999999999999999987775321 111122211 2234566666665544
No 374
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=39.71 E-value=70 Score=27.52 Aligned_cols=39 Identities=23% Similarity=0.379 Sum_probs=29.7
Q ss_pred cEEEEcccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEE
Q 012318 276 EYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFA 317 (466)
Q Consensus 276 ~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~a 317 (466)
.++.-..+..||+=||.|. .+.-||||++++ +..-++|+
T Consensus 113 ~vl~~~G~~epGDCGG~L~-C~HGviGivTaG--G~g~VaF~ 151 (166)
T 1z8r_A 113 HVLLATGFSEPGDAGGILR-CEHGVIGLVTMG--GEGVVGFA 151 (166)
T ss_dssp SEEEEECSSSCCCCBSEEE-CSSSEEEEEEEE--CSSEEEEE
T ss_pred cEEEEecCCCCCCCCceee-eCCCceEEEecC--CCCEEEEE
Confidence 4566677889999999999 889999999986 22335554
No 375
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=38.60 E-value=74 Score=26.72 Aligned_cols=39 Identities=21% Similarity=0.427 Sum_probs=29.6
Q ss_pred cEEEEcccCCCCCccceeecCCCeEEEEEEeEecCCCeeeEE
Q 012318 276 EYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFA 317 (466)
Q Consensus 276 ~~i~~~~~i~~G~SGGPlvd~~G~VVGI~~~~~~~~~g~~~a 317 (466)
.++.-..+..+|+=||.|. .+.-||||++++ +..-++|+
T Consensus 93 ~~l~g~G~~epGDCGG~L~-C~HGviGivTaG--G~g~VaF~ 131 (142)
T 2hrv_A 93 NLLIGEGPCEPGDCGGKLL-CKHGVIGIVTAG--GDNHVAFI 131 (142)
T ss_dssp EEEEEECCCCTTCTTCEEE-ETTEEEEEEEEE--CSSEEEEE
T ss_pred cEEEEEcCCCCCCCCceee-eCCCceEEEecC--CCCEEEEE
Confidence 3556667889999999999 789999999986 23335554
No 376
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=35.08 E-value=21 Score=30.26 Aligned_cols=22 Identities=27% Similarity=0.439 Sum_probs=19.3
Q ss_pred CCCCccceeecCCCeEEEEEEe
Q 012318 285 NAGNSGGPLVNIDGEIVGINIM 306 (466)
Q Consensus 285 ~~G~SGGPlvd~~G~VVGI~~~ 306 (466)
..+.++-|++|.+|+++|+++.
T Consensus 46 ~~~~~~~pVvd~~g~lvGiit~ 67 (170)
T 4esy_A 46 EHQIGCAPVVDQNGHLVGIITE 67 (170)
T ss_dssp HTTCSEEEEECTTSCEEEEEEG
T ss_pred HcCCeEEEEEcCCccEEEEEEH
Confidence 4677899999999999999975
No 377
>2fwk_A U6 snRNA-associated SM-like protein LSM5; structural genomics, structural genomics consortium, SGC, DNA binding protein; 2.14A {Cryptosporidium parvum} SCOP: b.38.1.1 PDB: 3pgg_A
Probab=35.01 E-value=28 Score=28.49 Aligned_cols=32 Identities=13% Similarity=0.335 Sum_probs=28.8
Q ss_pred ceEEEEeCCCcEEEEEEEEecCCCCEEEEEeC
Q 012318 187 GKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (466)
Q Consensus 187 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~ 218 (466)
.+++|.+.+|+.+.+.+.++|.+.+|.|=.+.
T Consensus 39 k~V~V~Lk~Gr~~~G~L~~fD~~mNlVL~d~~ 70 (121)
T 2fwk_A 39 NRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQ 70 (121)
T ss_dssp SBCEEEETTTEEECCEEEEECTTCCEEEESCC
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeceEE
Confidence 57999999999999999999999999886554
No 378
>2y9a_D Small nuclear ribonucleoprotein SM D3; splicing-RNA complex, PRE-mRNA splicing, spliceosome, snRNP biogenesis, SM site, SM fold, heteromeric heptameric ring; 3.60A {Homo sapiens} PDB: 2y9b_D 2y9c_D 2y9d_D 3pgw_Z* 3cw1_D
Probab=34.79 E-value=64 Score=26.58 Aligned_cols=33 Identities=15% Similarity=0.314 Sum_probs=30.2
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~ 218 (466)
...+.|.+.+|..|.+++..+|...++.|-.+.
T Consensus 15 gk~V~VeLknG~~~~G~L~~~D~~MNi~L~dv~ 47 (126)
T 2y9a_D 15 GHIVTCETNTGEVYRGKLIEAEDNMNCQMSNIT 47 (126)
T ss_dssp SCEEEEEESSCCEEEEEEEEECTTSCEEEEEEE
T ss_pred CCEEEEEECCCcEEEEEEEEEcCceEEEEeeEE
Confidence 368999999999999999999999999988775
No 379
>1m5q_A SMAP3, small nuclear ribonucleoprotein homolog, SM-like P; OB-like fold, B-sheet toroid, 14-MER, cadmium-binding site, translation; 2.00A {Pyrobaculum aerophilum} SCOP: b.38.1.1
Probab=33.48 E-value=63 Score=26.79 Aligned_cols=34 Identities=21% Similarity=0.437 Sum_probs=31.1
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
+..+.|.+.+|+.+.+.+.++|...++.|=.+..
T Consensus 10 gk~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~E 43 (130)
T 1m5q_A 10 GREVQVVLSNGEVYKGVLHAVDNQLNIVLANASN 43 (130)
T ss_dssp TSEEEEEETTSCEEEEEEEEECTTCCEEEEEEEC
T ss_pred CCeEEEEECCCcEEEEEEEEEcccceeEEeeEEE
Confidence 3689999999999999999999999999988875
No 380
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=31.99 E-value=1.4e+02 Score=21.53 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=31.5
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK 220 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~ 220 (466)
...+..+..||.-|+|++..++....-+++++...
T Consensus 17 GddVLA~wtDGl~Y~gtI~~V~~~~gtC~V~F~D~ 51 (66)
T 2eqj_A 17 GQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDS 51 (66)
T ss_dssp TCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTT
T ss_pred CCEEEEEEccCcEEEeEEEEEccCCcEEEEEEccC
Confidence 46788889999999999999999999999999854
No 381
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=30.20 E-value=1.4e+02 Score=20.94 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=31.7
Q ss_pred CceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCC
Q 012318 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK 220 (466)
Q Consensus 186 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~ 220 (466)
...+.+...||+-|.++++..+...+-+++++...
T Consensus 7 GedVLarwsDG~fYlGtI~~V~~~~~~clV~F~D~ 41 (58)
T 4hcz_A 7 GQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 41 (58)
T ss_dssp TCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTS
T ss_pred CCEEEEEecCCCEEeEEEEEEecCCCEEEEEEcCC
Confidence 36788999999999999999999999999999864
No 382
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=29.50 E-value=1.1e+02 Score=21.63 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=26.3
Q ss_pred CceEEEEe-CCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 186 KGKVDVTL-QDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 186 ~~~i~V~~-~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
...+...+ .||+.|+|++...+...+.+.+.+..
T Consensus 12 Gd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvd 46 (64)
T 4a4f_A 12 GDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 46 (64)
T ss_dssp TCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEe
Confidence 35666777 58999999999999876777777664
No 383
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=28.66 E-value=32 Score=28.87 Aligned_cols=22 Identities=18% Similarity=0.205 Sum_probs=18.6
Q ss_pred CCCCccceeecCCCeEEEEEEe
Q 012318 285 NAGNSGGPLVNIDGEIVGINIM 306 (466)
Q Consensus 285 ~~G~SGGPlvd~~G~VVGI~~~ 306 (466)
..|.|+=|++|.+|+++|+++.
T Consensus 45 ~~~~s~~pVvd~~~~lvGiit~ 66 (156)
T 3k6e_A 45 QMTYTRVPVVTDEKQFVGTIGL 66 (156)
T ss_dssp TSSSSEEEEECC-CBEEEEEEH
T ss_pred HcCCcEEEEEcCCCcEEEEEEe
Confidence 5789999999999999999864
No 384
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=25.34 E-value=36 Score=28.53 Aligned_cols=16 Identities=31% Similarity=0.447 Sum_probs=14.2
Q ss_pred ceeecCCCeEEEEEEe
Q 012318 291 GPLVNIDGEIVGINIM 306 (466)
Q Consensus 291 GPlvd~~G~VVGI~~~ 306 (466)
-|++|.+|+++||++.
T Consensus 118 lpVVd~~g~l~GiiT~ 133 (156)
T 3k6e_A 118 LPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEECTTSBEEEEEEH
T ss_pred eEEEecCCEEEEEEEH
Confidence 6999999999999864
No 385
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=24.60 E-value=39 Score=26.80 Aligned_cols=20 Identities=10% Similarity=0.147 Sum_probs=16.3
Q ss_pred CCccceeecCCCeEEEEEEe
Q 012318 287 GNSGGPLVNIDGEIVGINIM 306 (466)
Q Consensus 287 G~SGGPlvd~~G~VVGI~~~ 306 (466)
+..--|++|.+|+++||++.
T Consensus 98 ~~~~lpVvd~~g~~~Giit~ 117 (127)
T 3nqr_A 98 RYHMAIVIDEFGGVSGLVTI 117 (127)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44557999999999999875
No 386
>3s6n_E Small nuclear ribonucleoprotein E; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_E 2y9c_E 2y9d_E 3cw1_E 3pgw_E* 2y9a_E
Probab=24.12 E-value=76 Score=24.52 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=26.8
Q ss_pred eEEEEe----CCCcEEEEEEEEecCCCCEEEEEeCC
Q 012318 188 KVDVTL----QDGRTFEGTVLNADFHSDIAIVKINS 219 (466)
Q Consensus 188 ~i~V~~----~~g~~~~a~vv~~d~~~DlAlLkv~~ 219 (466)
++.|.+ .+|+.+.+.+.++|...+|.|=....
T Consensus 28 ~v~V~l~~~~~~gr~~~G~L~gfD~~mNlvL~d~~E 63 (92)
T 3s6n_E 28 RSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEE 63 (92)
T ss_dssp TCEEEEEESSSCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEEEecCCEEEEEEEEEEcCcCcEEEeeeEE
Confidence 455555 89999999999999999999877763
No 387
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=23.78 E-value=50 Score=26.73 Aligned_cols=18 Identities=22% Similarity=0.569 Sum_probs=15.4
Q ss_pred ceeecCCCeEEEEEEeEe
Q 012318 291 GPLVNIDGEIVGINIMKV 308 (466)
Q Consensus 291 GPlvd~~G~VVGI~~~~~ 308 (466)
.|++|.+|++||+++.+.
T Consensus 106 ~PV~~~~g~viGvv~vg~ 123 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGY 123 (131)
T ss_dssp EEEECTTCCEEEEEEEEE
T ss_pred EeEECCCCCEEEEEEEEE
Confidence 489988899999998764
No 388
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=23.74 E-value=42 Score=26.58 Aligned_cols=20 Identities=30% Similarity=0.285 Sum_probs=15.8
Q ss_pred CCccceeecCCCeEEEEEEe
Q 012318 287 GNSGGPLVNIDGEIVGINIM 306 (466)
Q Consensus 287 G~SGGPlvd~~G~VVGI~~~ 306 (466)
+...-|++|.+|+++|+++.
T Consensus 98 ~~~~lpVvd~~g~~~Giit~ 117 (128)
T 3gby_A 98 KCSVVPLADEDGRYEGVVSR 117 (128)
T ss_dssp SSSEEEEECTTCBEEEEEEH
T ss_pred CCcEEEEECCCCCEEEEEEH
Confidence 33446999999999999864
No 389
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=23.44 E-value=42 Score=27.08 Aligned_cols=20 Identities=15% Similarity=0.273 Sum_probs=16.3
Q ss_pred CCccceeecCCCeEEEEEEe
Q 012318 287 GNSGGPLVNIDGEIVGINIM 306 (466)
Q Consensus 287 G~SGGPlvd~~G~VVGI~~~ 306 (466)
+..--|++|.+|+++||++.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (136)
T 3lfr_A 99 HNHMAIVIDEYGGVAGLVTI 118 (136)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 34457999999999999875
No 390
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=22.80 E-value=44 Score=26.73 Aligned_cols=20 Identities=25% Similarity=0.380 Sum_probs=16.0
Q ss_pred CCccceeecCCCeEEEEEEe
Q 012318 287 GNSGGPLVNIDGEIVGINIM 306 (466)
Q Consensus 287 G~SGGPlvd~~G~VVGI~~~ 306 (466)
+..--|++|.+|+++||++.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (130)
T 3hf7_A 99 KKKVGLVVDEYGDIQGLVTV 118 (130)
T ss_dssp CCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEeeH
Confidence 33457899999999999875
No 391
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=22.63 E-value=44 Score=26.55 Aligned_cols=20 Identities=15% Similarity=0.213 Sum_probs=16.0
Q ss_pred CCccceeecCCCeEEEEEEe
Q 012318 287 GNSGGPLVNIDGEIVGINIM 306 (466)
Q Consensus 287 G~SGGPlvd~~G~VVGI~~~ 306 (466)
+..--|++|.+|+++|+++.
T Consensus 101 ~~~~~~Vvd~~g~~vGivt~ 120 (130)
T 3i8n_A 101 RLQLALVVDEYGTVLGLVTL 120 (130)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEEEH
Confidence 34457899999999999864
No 392
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=21.91 E-value=44 Score=26.56 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=15.2
Q ss_pred CCccceeecCCCeEEEEEEe
Q 012318 287 GNSGGPLVNIDGEIVGINIM 306 (466)
Q Consensus 287 G~SGGPlvd~~G~VVGI~~~ 306 (466)
+..--|++|.+|+++|+++.
T Consensus 98 ~~~~~pVvd~~g~~~Giit~ 117 (129)
T 3jtf_A 98 RNHLAIVIDEHGGISGLVTM 117 (129)
T ss_dssp SCCEEEEECC-CCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44457899989999999864
No 393
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=21.18 E-value=1.3e+02 Score=22.49 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=30.3
Q ss_pred ceEEEEeCCCcEEEEEEEEecCCCCEEEEEeCCC
Q 012318 187 GKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK 220 (466)
Q Consensus 187 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlLkv~~~ 220 (466)
..+.++..||.-|.++++..+...+-++++++.+
T Consensus 31 eDVLarwsDGlfYLGTI~kV~~~~e~ClV~F~D~ 64 (79)
T 2m0o_A 31 QDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 64 (79)
T ss_dssp CEEEBCCTTSCCCEEEEEEEETTTTEEEEEETTS
T ss_pred CEEEEEecCCCEEeEEEEEeccCCCEEEEEEcCC
Confidence 5677888899999999999999999999999864
No 394
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=21.08 E-value=51 Score=25.55 Aligned_cols=20 Identities=35% Similarity=0.398 Sum_probs=16.1
Q ss_pred CCccceeecCCCeEEEEEEe
Q 012318 287 GNSGGPLVNIDGEIVGINIM 306 (466)
Q Consensus 287 G~SGGPlvd~~G~VVGI~~~ 306 (466)
+.+--|++|.+|+++|+++.
T Consensus 92 ~~~~l~Vvd~~g~~~Givt~ 111 (122)
T 3kpb_A 92 NISGVPVVDDYRRVVGIVTS 111 (122)
T ss_dssp TCSEEEEECTTCBEEEEEEH
T ss_pred CCCeEEEECCCCCEEEEEeH
Confidence 44557999988999999864
Done!