Your job contains 1 sequence.
>012319
MAVGSPTLTYEHSKETKPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELD
GGFLSLEEIDEASYNLQIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKE
QEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRL
HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEE
REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGG
MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE
LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSL
KLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012319
(466 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2086775 - symbol:AT3G16840 species:3702 "Arabi... 1133 1.0e-128 2
DICTYBASE|DDB_G0281841 - symbol:ddx24 "DEAD/DEAH box heli... 343 1.3e-53 3
ASPGD|ASPL0000042587 - symbol:AN1750 species:162425 "Emer... 456 1.6e-42 1
UNIPROTKB|G3V529 - symbol:DDX24 "ATP-dependent RNA helica... 327 2.7e-42 2
MGI|MGI:1351337 - symbol:Ddx24 "DEAD (Asp-Glu-Ala-Asp) bo... 327 3.3e-42 2
UNIPROTKB|Q9GZR7 - symbol:DDX24 "ATP-dependent RNA helica... 327 3.3e-42 2
UNIPROTKB|E2RIC4 - symbol:DDX24 "Uncharacterized protein"... 328 3.4e-42 2
RGD|727929 - symbol:Ddx24 "DEAD (Asp-Glu-Ala-Asp) box pol... 319 1.8e-41 2
UNIPROTKB|F1SCG7 - symbol:LOC100620190 "Uncharacterized p... 318 3.9e-41 2
CGD|CAL0005900 - symbol:MAK5 species:5476 "Candida albica... 410 5.4e-40 2
WB|WBGene00018890 - symbol:F55F8.2 species:6239 "Caenorha... 416 3.3e-38 1
UNIPROTKB|F1NJ62 - symbol:F1NJ62 "Uncharacterized protein... 290 5.0e-37 3
SGD|S000000346 - symbol:MAK5 "Essential nucleolar protein... 365 2.3e-34 2
FB|FBgn0032690 - symbol:CG10333 species:7227 "Drosophila ... 357 4.9e-33 2
POMBASE|SPBC4F6.07c - symbol:SPBC4F6.07c "ATP-dependent R... 239 6.0e-32 4
ZFIN|ZDB-GENE-030131-6215 - symbol:ddx23 "DEAD (Asp-Glu-A... 337 3.2e-31 2
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas... 310 3.8e-31 2
UNIPROTKB|Q8EBV7 - symbol:SO_3388 "ATP-dependent RNA heli... 313 4.8e-31 2
TIGR_CMR|SO_3388 - symbol:SO_3388 "ATP-dependent RNA heli... 313 4.8e-31 2
RGD|1308685 - symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box po... 337 5.5e-31 2
UNIPROTKB|E2RTL6 - symbol:DDX23 "Uncharacterized protein"... 337 5.5e-31 2
FB|FBgn0034496 - symbol:CG9143 species:7227 "Drosophila m... 333 6.9e-31 2
TAIR|locus:2057640 - symbol:AT2G33730 species:3702 "Arabi... 327 6.3e-30 2
TIGR_CMR|CPS_1590 - symbol:CPS_1590 "ATP-dependent RNA he... 302 9.7e-30 2
ASPGD|ASPL0000051195 - symbol:AN1634 species:162425 "Emer... 337 1.4e-29 1
UNIPROTKB|A6QLB2 - symbol:DDX23 "Uncharacterized protein"... 337 1.6e-29 1
UNIPROTKB|Q9BUQ8 - symbol:DDX23 "Probable ATP-dependent R... 337 1.6e-29 1
UNIPROTKB|Q8ECL2 - symbol:SO_3125 "ATP-dependent RNA heli... 299 2.3e-29 2
TIGR_CMR|SO_3125 - symbol:SO_3125 "ATP-dependent RNA heli... 299 2.3e-29 2
UNIPROTKB|I3LNN1 - symbol:DDX23 "Uncharacterized protein"... 320 2.7e-29 2
CGD|CAL0001091 - symbol:orf19.672 species:5476 "Candida a... 327 6.8e-29 1
UNIPROTKB|Q59W52 - symbol:PRP28 "Pre-mRNA-splicing ATP-de... 327 6.8e-29 1
UNIPROTKB|F5GYL3 - symbol:DDX24 "ATP-dependent RNA helica... 327 8.1e-29 1
UNIPROTKB|A6H7B6 - symbol:DDX24 "DDX24 protein" species:9... 329 1.2e-28 1
WB|WBGene00017162 - symbol:ddx-23 species:6239 "Caenorhab... 320 8.1e-28 1
TAIR|locus:2173517 - symbol:AT5G60990 species:3702 "Arabi... 310 1.1e-27 1
UNIPROTKB|Q9KLH6 - symbol:VC_A0768 "ATP-dependent RNA hel... 296 1.4e-27 2
TIGR_CMR|VC_A0768 - symbol:VC_A0768 "ATP-dependent RNA he... 296 1.4e-27 2
GENEDB_PFALCIPARUM|PFE0925c - symbol:PFE0925c "snrnp prot... 317 3.9e-27 1
UNIPROTKB|Q8I0W7 - symbol:PFE0925c "Snrnp protein, putati... 317 3.9e-27 1
UNIPROTKB|Q83DM8 - symbol:rhlE "ATP-dependent RNA helicas... 292 1.2e-26 2
TIGR_CMR|CBU_0670 - symbol:CBU_0670 "ATP-dependent RNA he... 292 1.2e-26 2
TIGR_CMR|CPS_1418 - symbol:CPS_1418 "ATP-dependent RNA he... 295 4.0e-26 1
TAIR|locus:2032910 - symbol:RH36 "RNA helicase 36" specie... 189 5.9e-26 3
TIGR_CMR|CPS_1125 - symbol:CPS_1125 "ATP-dependent RNA he... 289 2.6e-25 2
POMBASE|SPAC31A2.07c - symbol:dbp10 "ATP-dependent RNA he... 216 5.3e-25 3
UNIPROTKB|F8VRX4 - symbol:DDX54 "ATP-dependent RNA helica... 187 8.0e-25 2
TAIR|locus:2130918 - symbol:AT4G16630 species:3702 "Arabi... 198 8.9e-25 2
DICTYBASE|DDB_G0281711 - symbol:ddx27 "DEAD/DEAH box heli... 192 2.1e-24 2
CGD|CAL0000864 - symbol:DRS1 species:5476 "Candida albica... 206 2.1e-24 2
UNIPROTKB|Q5ACK7 - symbol:DRS1 "ATP-dependent RNA helicas... 206 2.1e-24 2
POMBASE|SPCC63.11 - symbol:prp28 "U5 snRNP-associated pro... 293 4.7e-24 1
FB|FBgn0032919 - symbol:CG9253 species:7227 "Drosophila m... 174 4.7e-24 3
FB|FBgn0010220 - symbol:Dbp45A "DEAD box protein 45A" spe... 180 5.5e-24 3
TIGR_CMR|CPS_3401 - symbol:CPS_3401 "ATP-dependent RNA he... 272 6.3e-24 2
TAIR|locus:2010306 - symbol:EMB1586 "embryo defective 158... 288 1.7e-23 1
CGD|CAL0004058 - symbol:DBP8 species:5476 "Candida albica... 210 2.5e-23 3
ZFIN|ZDB-GENE-050522-359 - symbol:zgc:112350 "zgc:112350"... 178 2.6e-23 2
ASPGD|ASPL0000062195 - symbol:AN10125 species:162425 "Eme... 195 2.7e-23 3
SGD|S000003046 - symbol:DBP3 "RNA-Dependent ATPase, membe... 181 2.8e-23 5
POMBASE|SPAC30D11.03 - symbol:ddx27 "ATP-dependent RNA he... 195 3.1e-23 3
GENEDB_PFALCIPARUM|PF14_0429 - symbol:PF14_0429 "RNA heli... 288 3.5e-23 2
UNIPROTKB|Q8IL21 - symbol:PF14_0429 "RNA helicase, putati... 288 3.5e-23 2
UNIPROTKB|F1NA53 - symbol:DDX49 "Uncharacterized protein"... 171 4.6e-23 3
DICTYBASE|DDB_G0277857 - symbol:helB2 "putative U5 small ... 288 4.7e-23 1
GENEDB_PFALCIPARUM|PF08_0096 - symbol:PF08_0096 "RNA heli... 288 5.9e-23 1
UNIPROTKB|Q8IAU1 - symbol:PF08_0096 "RNA helicase, putati... 288 5.9e-23 1
UNIPROTKB|Q8EHT1 - symbol:SO_1136 "ATP-dependent RNA heli... 281 6.3e-23 1
TIGR_CMR|SO_1136 - symbol:SO_1136 "ATP-dependent RNA heli... 281 6.3e-23 1
ASPGD|ASPL0000013201 - symbol:AN4233 species:162425 "Emer... 176 6.4e-23 2
UNIPROTKB|A4QYM6 - symbol:DRS1 "ATP-dependent RNA helicas... 188 7.8e-23 4
UNIPROTKB|G3V727 - symbol:Ddx47 "Protein Ddx47" species:1... 181 8.2e-23 2
WB|WBGene00019219 - symbol:H20J04.4 species:6239 "Caenorh... 200 8.6e-23 2
POMBASE|SPBC17D1.06 - symbol:dbp3 "ATP-dependent RNA heli... 202 8.8e-23 3
UNIPROTKB|F1NYX0 - symbol:DDX49 "Uncharacterized protein"... 171 1.1e-22 3
UNIPROTKB|G4MSR4 - symbol:MGG_07099 "Uncharacterized prot... 279 1.2e-22 2
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he... 188 1.8e-22 3
GENEDB_PFALCIPARUM|PFL2475w - symbol:PFL2475w "DEAD/DEAH ... 271 1.9e-22 2
UNIPROTKB|Q8I4R9 - symbol:PFL2475w "DEAD/DEAH box helicas... 271 1.9e-22 2
CGD|CAL0000625 - symbol:SPB4 species:5476 "Candida albica... 280 2.1e-22 2
UNIPROTKB|F1Q073 - symbol:DDX27 "Uncharacterized protein"... 174 2.2e-22 3
DICTYBASE|DDB_G0280147 - symbol:ddx47 "DEAD/DEAH box heli... 177 2.4e-22 2
UNIPROTKB|Q4K4H4 - symbol:rhlE_2 "Putative ATP-dependent ... 270 2.4e-22 2
MGI|MGI:2385884 - symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) bo... 170 2.4e-22 3
UNIPROTKB|Q9H0S4 - symbol:DDX47 "Probable ATP-dependent R... 177 2.4e-22 2
ASPGD|ASPL0000054300 - symbol:AN0583 species:162425 "Emer... 203 2.5e-22 3
UNIPROTKB|J9P9C6 - symbol:DDX27 "Uncharacterized protein"... 174 2.5e-22 3
UNIPROTKB|Q5ZLB0 - symbol:DDX47 "Uncharacterized protein"... 181 2.7e-22 2
RGD|1311124 - symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box po... 170 2.8e-22 2
UNIPROTKB|F6S4E6 - symbol:DDX39B "Spliceosome RNA helicas... 170 3.4e-22 2
MGI|MGI:1915005 - symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) bo... 181 3.5e-22 2
UNIPROTKB|Q96GQ7 - symbol:DDX27 "Probable ATP-dependent R... 171 3.6e-22 3
TAIR|locus:2034481 - symbol:STRS1 "STRESS RESPONSE SUPPRE... 271 4.0e-22 2
ZFIN|ZDB-GENE-021220-2 - symbol:ddx54 "DEAD (Asp-Glu-Ala-... 208 4.8e-22 3
UNIPROTKB|A1A4H6 - symbol:DDX27 "Probable ATP-dependent R... 169 5.2e-22 3
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel... 189 5.3e-22 3
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he... 189 5.3e-22 3
TIGR_CMR|SO_4034 - symbol:SO_4034 "ATP-dependent RNA heli... 196 5.4e-22 3
WB|WBGene00012059 - symbol:T26G10.1 species:6239 "Caenorh... 178 6.4e-22 2
CGD|CAL0000056 - symbol:orf19.7546 species:5476 "Candida ... 164 6.5e-22 3
WARNING: Descriptions of 747 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2086775 [details] [associations]
symbol:AT3G16840 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AB028608 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14805 HOGENOM:HOG000290702 EMBL:AK318706
EMBL:AY045669 EMBL:AY054475 EMBL:AJ010465 IPI:IPI00535611
IPI:IPI01019866 PIR:T51744 RefSeq:NP_188307.3 UniGene:At.5723
ProteinModelPortal:Q93Y39 SMR:Q93Y39 PaxDb:Q93Y39 PRIDE:Q93Y39
GeneID:820937 KEGG:ath:AT3G16840 GeneFarm:929 TAIR:At3g16840
InParanoid:Q93Y39 OMA:DAYLYYI Genevestigator:Q93Y39
GermOnline:AT3G16840 Uniprot:Q93Y39
Length = 826
Score = 1133 (403.9 bits), Expect = 1.0e-128, Sum P(2) = 1.0e-128
Identities = 227/322 (70%), Positives = 268/322 (83%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
+++ VS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKAC
Sbjct: 163 QDASAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFN 222
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLR 265
AA+QGK D+IGAAETGSGKTLAFGLPI+QRLL+EREK GK+ KGEEA+KYA G+LR
Sbjct: 223 VAAYQGK-DVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLR 281
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
ALIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGRLW
Sbjct: 282 ALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLW 341
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTC 385
ELMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ NEG+++ ++
Sbjct: 342 ELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSN 401
Query: 386 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIETLSERAGMRAN 444
TV ++ +KKRQT VFSATIALS+DFRKKLK GS K KQS +G +NSIE LSERAGMR N
Sbjct: 402 DTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDN 461
Query: 445 VAIVDLTNVSVLANKLEESFIE 466
VAI+DLT S+LA K+EESFI+
Sbjct: 462 VAIIDLTTTSILAPKIEESFIK 483
Score = 151 (58.2 bits), Expect = 1.0e-128, Sum P(2) = 1.0e-128
Identities = 36/74 (48%), Positives = 47/74 (63%)
Query: 11 EHSKETKPNRRKRTRKSREA-EKLNSLKWNSSFSAADNDP---FAFLV-GSNELDGGFLS 65
E S K N+R RK E E+++SL W+SS ++D F+ L GS +LDGGFLS
Sbjct: 7 ESSLMKKRNKRSHKRKREEDFERIDSLPWSSSIPIGEDDEGESFSTLFSGSGQLDGGFLS 66
Query: 66 LEEIDEASYNLQIP 79
LEEIDEA Y+L +P
Sbjct: 67 LEEIDEADYHLTLP 80
Score = 49 (22.3 bits), Expect = 5.9e-118, Sum P(2) = 5.9e-118
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 14 KETKPNR-RKRTRKSREAEKLNSLKWNSSFSAADND 48
K+ K N+ +K+ +K ++ +K+N N SA D
Sbjct: 136 KKAKRNKEKKKEKKKKKQKKINEAAKNQDASAVSCD 171
Score = 45 (20.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 23/106 (21%), Positives = 42/106 (39%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSI---YRLGFKEPTPIQKACIPAAAH-QG 211
D+ + + A ++ + + L HP+ K Y G T +Q + Q
Sbjct: 688 DNVRQRKATSARLNKLKEELSTLLSHPMQPKKFSGRYFAGVGVSTLMQNQFVELKKQKQA 747
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEK 257
++ I G + K + ++ L R +ML+ KG+ AEK
Sbjct: 748 QMQIGG--DIKRRKLVVINQNCIEPLQALRAGGNEMLKMKGQSAEK 791
>DICTYBASE|DDB_G0281841 [details] [associations]
symbol:ddx24 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281841 GO:GO:0005524 GenomeReviews:CM000152_GR
GO:GO:0003723 EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_640452.1 ProteinModelPortal:Q54TD7
EnsemblProtists:DDB0234200 GeneID:8623265 KEGG:ddi:DDB_G0281841
KO:K14805 OMA:NIDHVAH Uniprot:Q54TD7
Length = 940
Score = 343 (125.8 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 66/124 (53%), Positives = 94/124 (75%)
Query: 249 EEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ 306
EE+ EE E+ K + L +L+I PTRELA+QVT+H+K + N++V+ IVGGM++++Q
Sbjct: 388 EEEEEEEEEGRSKEYRKLFSLVICPTRELAIQVTNHIKSIISHTNLKVISIVGGMASQRQ 447
Query: 307 ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+R+L RPE+VV TPGRLWEL++ G +HLVEL +L +DEADRM+E GHF EL+SI+
Sbjct: 448 QRVLSKRPEIVVATPGRLWELITEGHQHLVELESLLCLGIDEADRMVEQGHFAELESILK 507
Query: 367 MLPM 370
LP+
Sbjct: 508 TLPI 511
Score = 222 (83.2 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 43/100 (43%), Positives = 65/100 (65%)
Query: 158 AEEELVS-EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
+E++ +S E + + WN L PL++K + LGF +PT IQ + IP A G D+I
Sbjct: 278 SEQKTISKEEQDQLDMSEWNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSG-YDVI 336
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAE 256
GAA+TGSGKTLAFG+P++QR+L+ K G+ +E K + +
Sbjct: 337 GAAQTGSGKTLAFGIPMVQRILQHLRKHGQNVENKANKQQ 376
Score = 67 (28.6 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 30/121 (24%), Positives = 48/121 (39%)
Query: 348 EADRMIENGHF--RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ D++ + G + + D +P Q EQ T KRQT VFSAT+
Sbjct: 536 KVDKLNDKGEMIKGDQDDMDDQIPDEEMEELEQEEQNHLTTT------HKRQTFVFSATL 589
Query: 406 A-LSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESF 464
+ D K+ L IE L E+ + + ++D+T + A L E+
Sbjct: 590 VNIPGD------GAPTSQKKKYRKLTPIENLIEKVRFQRDYKLIDVTQKRLTAKNLLETK 643
Query: 465 I 465
I
Sbjct: 644 I 644
Score = 51 (23.0 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 11/16 (68%), Positives = 11/16 (68%)
Query: 61 GGFLSLEEIDEASYNL 76
GGFL LEEID Y L
Sbjct: 26 GGFLGLEEIDPNDYFL 41
Score = 43 (20.2 bits), Expect = 8.4e-32, Sum P(2) = 8.4e-32
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 11 EHSKETKPNRRKRTRKSREAEKLNSLKWNS 40
E K+ K ++T E ++L+ +WNS
Sbjct: 269 EKIKKRKEISEQKTISKEEQDQLDMSEWNS 298
Score = 38 (18.4 bits), Expect = 1.9e-34, Sum P(3) = 1.9e-34
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 145 VEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMK 186
V++ G DD++ E + S + D ++ + P ++K
Sbjct: 90 VDKKRKSKKGNDDSDNEYSGYQDDSDQDDEYSAAKKKPRIIK 131
>ASPGD|ASPL0000042587 [details] [associations]
symbol:AN1750 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:AACD01000027 EMBL:BN001307 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14805 HOGENOM:HOG000290702 RefSeq:XP_659354.1
ProteinModelPortal:Q5BCI0 STRING:Q5BCI0 PRIDE:Q5BCI0
EnsemblFungi:CADANIAT00008396 GeneID:2875695 KEGG:ani:AN1750.2
OMA:VEEGYFA OrthoDB:EOG44J5S7 Uniprot:Q5BCI0
Length = 770
Score = 456 (165.6 bits), Expect = 1.6e-42, P = 1.6e-42
Identities = 118/311 (37%), Positives = 174/311 (55%)
Query: 162 LVSEAEIS-TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAE 220
L EA+ + AW L L P + S+ +L F PT +QK+CIP G D+IG A
Sbjct: 185 LEDEADDDGADISAWEPLGLSPETLTSLSKLKFSTPTSVQKSCIPPIL-DGH-DVIGKAS 242
Query: 221 TGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVT 280
TGSGKTLAFGLPI++ LE RE+ K ++ + EE EK P ALI++PTRELA Q+
Sbjct: 243 TGSGKTLAFGLPILEHYLE-RERR-KTIDSE-EEKEKI-PI----ALILSPTRELAHQLQ 294
Query: 281 DHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 337
H+ + A G+N R + GG+S +KQ+RLL+ ++V+GTPGR+WE++ G+ +
Sbjct: 295 KHIYGLISNAPGVNARTALLTGGLSVQKQQRLLETA-DIVIGTPGRVWEVLRTGQGLIRR 353
Query: 338 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 397
+ + F V+DEADR++ GHF+E++ I+ L E + V + +RQ
Sbjct: 354 MQGIKFLVIDEADRLLSEGHFKEVEDILSSLDRVEDGGPPDEEDDSSEENV--VPGVERQ 411
Query: 398 TLVFSATIALSADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSV 455
TLVFSAT D ++KL G +N S+E L ++ R +D+ VS
Sbjct: 412 TLVFSATF--HRDLQQKLAGKGKWTGGDIMNKKESMEYLLQKLNFREEKPKFIDVNPVSQ 469
Query: 456 LANKLEESFIE 466
+A L+E +E
Sbjct: 470 MAEGLKEGIVE 480
>UNIPROTKB|G3V529 [details] [associations]
symbol:DDX24 "ATP-dependent RNA helicase DDX24"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL079302 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:13266 ChiTaRS:DDX24 ProteinModelPortal:G3V529 SMR:G3V529
Ensembl:ENST00000555054 ArrayExpress:G3V529 Bgee:G3V529
Uniprot:G3V529
Length = 816
Score = 327 (120.2 bits), Expect = 2.7e-42, Sum P(2) = 2.7e-42
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 319 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 377
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 378 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 437
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQT----QTCVTVSSLQRK---KRQTLVFSATIALSA 409
HF EL +++ML N S QT T V + K+ T T L
Sbjct: 438 HFAELSQLLEML---NDSQYNPKRQTLVFSATLTLVHQAPARILHKKHTKKMDKTAKLDL 494
Query: 410 DFRKKLKHGSLKLKQSVNGLNSIETLSE 437
+K G K+ ++ETL+E
Sbjct: 495 LMQKIGMRGKPKVIDLTRNEATVETLTE 522
Score = 157 (60.3 bits), Expect = 2.7e-42, Sum P(2) = 2.7e-42
Identities = 34/94 (36%), Positives = 58/94 (61%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
T + P A+ + + + AW +L + +++++ LGF PTPIQ + A A
Sbjct: 126 TAAKVPKKAKTWIPEVHDQKADVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-APAI 184
Query: 210 QGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
+ K+DI+GAAETGSGKTLAF +P++ +L+ +++
Sbjct: 185 RDKLDILGAAETGSGKTLAFAIPMIHAVLQWQKR 218
Score = 88 (36.0 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 395 KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVS 454
KRQTLVFSAT+ L ++ H K + ++ ++ L ++ GMR ++DLT
Sbjct: 457 KRQTLVFSATLTLVHQAPARILHK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNE 514
Query: 455 VLANKLEESFI 465
L E+ I
Sbjct: 515 ATVETLTETKI 525
>MGI|MGI:1351337 [details] [associations]
symbol:Ddx24 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 24"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1351337
GO:GO:0005524 GO:GO:0003723 EMBL:CH466549 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14805 CTD:57062
HOGENOM:HOG000290702 HOVERGEN:HBG104200 EMBL:AF214732 EMBL:BC055048
EMBL:BC055317 EMBL:U46690 IPI:IPI00380228 RefSeq:NP_001152974.1
RefSeq:NP_065240.2 UniGene:Mm.3935 UniGene:Mm.475067
ProteinModelPortal:Q9ESV0 SMR:Q9ESV0 PhosphoSite:Q9ESV0
PaxDb:Q9ESV0 PRIDE:Q9ESV0 Ensembl:ENSMUST00000044923 GeneID:27225
KEGG:mmu:27225 GeneTree:ENSGT00550000074847 InParanoid:Q7TM97
OrthoDB:EOG45TCMP NextBio:305144 Bgee:Q9ESV0 CleanEx:MM_DDX24
Genevestigator:Q9ESV0 GermOnline:ENSMUSG00000041645 Uniprot:Q9ESV0
Length = 857
Score = 327 (120.2 bits), Expect = 3.3e-42, Sum P(2) = 3.3e-42
Identities = 79/207 (38%), Positives = 110/207 (53%)
Query: 240 EREKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
+ E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +
Sbjct: 362 DAEQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAIL 421
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGGMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GH
Sbjct: 422 VGGMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGH 481
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQT----QTCVTVSSLQRK---KRQTLVFSATIALSAD 410
F EL +++ML N S S QT T V + K+ T L
Sbjct: 482 FAELSQLLEML---NDSQYNPSRQTLVFSATLTLVHQAPARILHKKHVKKMDKTDKLDLL 538
Query: 411 FRKKLKHGSLKLKQSVNGLNSIETLSE 437
+K G K+ ++ETL+E
Sbjct: 539 MQKVGMRGKPKVIDLTRNEGTVETLTE 565
Score = 157 (60.3 bits), Expect = 3.3e-42, Sum P(2) = 3.3e-42
Identities = 33/86 (38%), Positives = 56/86 (65%)
Query: 155 PDDAEEELVSEA-EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKV 213
P +++ ++E + + AW +L + +++++ LGF PTPIQ + A A + K+
Sbjct: 174 PKKSKKTWMAEVHDQKADVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTL-APAIRDKL 232
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLE 239
DI+GAAETGSGKTLAF +P++ +L+
Sbjct: 233 DILGAAETGSGKTLAFAIPMIHSVLQ 258
Score = 83 (34.3 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 396 RQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSV 455
RQTLVFSAT+ L ++ H K + ++ + ++ L ++ GMR ++DLT
Sbjct: 501 RQTLVFSATLTLVHQAPARILHK--KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRNEG 558
Query: 456 LANKLEESFI 465
L E+ I
Sbjct: 559 TVETLTETKI 568
>UNIPROTKB|Q9GZR7 [details] [associations]
symbol:DDX24 "ATP-dependent RNA helicase DDX24"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016070 "RNA metabolic
process" evidence=NAS] [GO:0003724 "RNA helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0005730 GO:GO:0003723 GO:GO:0016070 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14805 EMBL:AF214731
EMBL:AL136886 EMBL:AK025162 EMBL:BC008847 EMBL:BC009406
IPI:IPI00006987 RefSeq:NP_065147.1 UniGene:Hs.510328
ProteinModelPortal:Q9GZR7 SMR:Q9GZR7 DIP:DIP-47301N IntAct:Q9GZR7
MINT:MINT-1378437 STRING:Q9GZR7 PhosphoSite:Q9GZR7 DMDM:18202929
SWISS-2DPAGE:Q9GZR7 PaxDb:Q9GZR7 PeptideAtlas:Q9GZR7 PRIDE:Q9GZR7
DNASU:57062 Ensembl:ENST00000330836 GeneID:57062 KEGG:hsa:57062
UCSC:uc001ycj.3 CTD:57062 GeneCards:GC14M094517 HGNC:HGNC:13266
HPA:HPA002554 MIM:606181 neXtProt:NX_Q9GZR7 PharmGKB:PA27211
HOGENOM:HOG000290702 HOVERGEN:HBG104200 InParanoid:Q9GZR7
OMA:DQQEERR PhylomeDB:Q9GZR7 ChiTaRS:DDX24 GenomeRNAi:57062
NextBio:62861 ArrayExpress:Q9GZR7 Bgee:Q9GZR7 CleanEx:HS_DDX24
Genevestigator:Q9GZR7 GermOnline:ENSG00000089737 Uniprot:Q9GZR7
Length = 859
Score = 327 (120.2 bits), Expect = 3.3e-42, Sum P(2) = 3.3e-42
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 362 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 420
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 421 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 480
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQT----QTCVTVSSLQRK---KRQTLVFSATIALSA 409
HF EL +++ML N S QT T V + K+ T T L
Sbjct: 481 HFAELSQLLEML---NDSQYNPKRQTLVFSATLTLVHQAPARILHKKHTKKMDKTAKLDL 537
Query: 410 DFRKKLKHGSLKLKQSVNGLNSIETLSE 437
+K G K+ ++ETL+E
Sbjct: 538 LMQKIGMRGKPKVIDLTRNEATVETLTE 565
Score = 157 (60.3 bits), Expect = 3.3e-42, Sum P(2) = 3.3e-42
Identities = 34/94 (36%), Positives = 58/94 (61%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
T + P A+ + + + AW +L + +++++ LGF PTPIQ + A A
Sbjct: 169 TAAKVPKKAKTWIPEVHDQKADVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-APAI 227
Query: 210 QGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
+ K+DI+GAAETGSGKTLAF +P++ +L+ +++
Sbjct: 228 RDKLDILGAAETGSGKTLAFAIPMIHAVLQWQKR 261
Score = 88 (36.0 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 395 KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVS 454
KRQTLVFSAT+ L ++ H K + ++ ++ L ++ GMR ++DLT
Sbjct: 500 KRQTLVFSATLTLVHQAPARILHK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNE 557
Query: 455 VLANKLEESFI 465
L E+ I
Sbjct: 558 ATVETLTETKI 568
>UNIPROTKB|E2RIC4 [details] [associations]
symbol:DDX24 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:DQQEERR
GeneTree:ENSGT00550000074847 EMBL:AAEX03005950
Ensembl:ENSCAFT00000027950 Uniprot:E2RIC4
Length = 818
Score = 328 (120.5 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 78/204 (38%), Positives = 114/204 (55%)
Query: 240 EREKAGKMLEEKGEEAE--KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
+ E+ G++ +E G + K PK L L++TPTRELA+QV H+ VAK ++ +
Sbjct: 321 DEEETGRLKQELGGKMTTCKVHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAIL 380
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGGMST+KQ+R+L +PE+VV TPGRLWEL+ HL L L V+DEADRM+E GH
Sbjct: 381 VGGMSTQKQQRMLNRQPEIVVATPGRLWELIKEKHPHLSNLRQLRCLVVDEADRMVEKGH 440
Query: 358 FRELQSIIDMLPMTNGSNEGQS---EQTQTCVTVSSLQ-RKKRQTLVFSATIALSADFRK 413
F EL +++ML + + + Q+ T T V + + K+ T T L +K
Sbjct: 441 FAELSQLLEMLGDSQYNPKRQTLIFSATLTLVHQAPARILHKKHTKKIDKTAKLDLFVQK 500
Query: 414 KLKHGSLKLKQSVNGLNSIETLSE 437
G K+ ++ETL+E
Sbjct: 501 IGMRGKPKVIDLTRNEATVETLTE 524
Score = 155 (59.6 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 35/94 (37%), Positives = 56/94 (59%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
T P A+ + + + AW +L + +++++ LGF PTPIQ + A A
Sbjct: 167 TAPKVPKKAKTWMPEMHDHKADVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-APAI 225
Query: 210 QGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
+ K+DI+GAAETGSGKTLAF +P++ +L+ + K
Sbjct: 226 RDKLDILGAAETGSGKTLAFAIPMIHTVLQWQVK 259
Score = 84 (34.6 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 395 KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVS 454
KRQTL+FSAT+ L ++ H K + ++ ++ ++ GMR ++DLT
Sbjct: 459 KRQTLIFSATLTLVHQAPARILHK--KHTKKIDKTAKLDLFVQKIGMRGKPKVIDLTRNE 516
Query: 455 VLANKLEESFI 465
L E+ I
Sbjct: 517 ATVETLTETKI 527
>RGD|727929 [details] [associations]
symbol:Ddx24 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 24"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:727929 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH473982 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14805
CTD:57062 HOGENOM:HOG000290702 HOVERGEN:HBG104200 OMA:DQQEERR
GeneTree:ENSGT00550000074847 OrthoDB:EOG45TCMP EMBL:BC097262
EMBL:AY341876 IPI:IPI00200634 RefSeq:NP_954550.1 UniGene:Rn.100166
Ensembl:ENSRNOT00000012256 GeneID:373065 KEGG:rno:373065
UCSC:RGD:727929 InParanoid:Q6VEU8 NextBio:692388
Genevestigator:Q6VEU8 Uniprot:Q6VEU8
Length = 851
Score = 319 (117.4 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 77/207 (37%), Positives = 109/207 (52%)
Query: 240 EREKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
+ E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +
Sbjct: 356 DEEQAGKLKQELCDQIAVYKVHPRRPLLGLVLTPTRELAVQVRQHIDAVAKFTGINTAIL 415
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGGMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E H
Sbjct: 416 VGGMSTQKQQRMLNRHPEIVIATPGRLWELIKEKHPHLSNLRQLRCLVIDEADRMVEKDH 475
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQT----QTCVTVSSLQRK---KRQTLVFSATIALSAD 410
F EL +++ML N S + QT T V + K+ T L
Sbjct: 476 FAELSQLLEML---NDSQYNPNRQTLVFSATLTLVHQAPARILHKKHVKKMDKTAKLDLL 532
Query: 411 FRKKLKHGSLKLKQSVNGLNSIETLSE 437
+K G K+ ++ETL+E
Sbjct: 533 MQKIGMRGKPKVIDLTRNEGTVETLTE 559
Score = 158 (60.7 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 34/90 (37%), Positives = 54/90 (60%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
T P A+ + + + AW +L + +++++ LGF PTPIQ + A A
Sbjct: 169 TAPKVPKKAKTWMPEVQDQKADVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTL-APAI 227
Query: 210 QGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
+ K+DI+GAAETGSGKTLAF +P++ +L+
Sbjct: 228 RDKLDILGAAETGSGKTLAFAIPMIHSVLQ 257
Score = 79 (32.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 396 RQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSV 455
RQTLVFSAT+ L ++ H K + ++ ++ L ++ GMR ++DLT
Sbjct: 495 RQTLVFSATLTLVHQAPARILHK--KHVKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEG 552
Query: 456 LANKLEESFI 465
L E+ I
Sbjct: 553 TVETLTETKI 562
>UNIPROTKB|F1SCG7 [details] [associations]
symbol:LOC100620190 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14805
CTD:57062 OMA:DQQEERR GeneTree:ENSGT00550000074847 EMBL:CT990641
RefSeq:XP_003356831.1 UniGene:Ssc.51900 UniGene:Ssc.99043
Ensembl:ENSSSCT00000002742 GeneID:100157901 KEGG:ssc:100157901
Uniprot:F1SCG7
Length = 856
Score = 318 (117.0 bits), Expect = 3.9e-41, Sum P(2) = 3.9e-41
Identities = 78/207 (37%), Positives = 111/207 (53%)
Query: 240 EREKAGKMLEEKGEE-AEKYA-PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
+ E +G++ +E + A A PK L L++TPTRELA+QV H+ VAK ++ +
Sbjct: 359 DEEHSGELKQELNSKIATSEAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAIL 418
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGGMST+KQ+R+L +PE+V+ TPGRLWEL+ + HL L L V+DEADRM+E GH
Sbjct: 419 VGGMSTQKQQRMLNRQPEIVIATPGRLWELVKEKQPHLSNLRQLRCLVIDEADRMVEKGH 478
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQT----QTCVTVSSLQRK---KRQTLVFSATIALSAD 410
F EL +++ML N S QT T V + K+ T L
Sbjct: 479 FAELSQLLEML---NDSQYNPKRQTLVFSATLTLVHQAPARILHKKHAKKIDKTAKLDLL 535
Query: 411 FRKKLKHGSLKLKQSVNGLNSIETLSE 437
+K G K+ ++ETL+E
Sbjct: 536 MQKIGMRGKPKVIDLTRNEATVETLTE 562
Score = 156 (60.0 bits), Expect = 3.9e-41, Sum P(2) = 3.9e-41
Identities = 35/89 (39%), Positives = 56/89 (62%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 247
Query: 231 LPIMQRLLE--EREKAGKMLEEKGEEAEK 257
+P++ +L+ ++K +L G E+
Sbjct: 248 IPMIHAVLQWQVKKKPTPVLSTTGAPPEE 276
Score = 90 (36.7 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 395 KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVS 454
KRQTLVFSAT+ L ++ H K + ++ ++ L ++ GMR ++DLT
Sbjct: 497 KRQTLVFSATLTLVHQAPARILHK--KHAKKIDKTAKLDLLMQKIGMRGKPKVIDLTRNE 554
Query: 455 VLANKLEESFI 465
L E+ I
Sbjct: 555 ATVETLTETKI 565
>CGD|CAL0005900 [details] [associations]
symbol:MAK5 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0005900 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14805
RefSeq:XP_714899.1 RefSeq:XP_714962.1 ProteinModelPortal:Q59ZH9
STRING:Q59ZH9 GeneID:3643358 GeneID:3643454 KEGG:cal:CaO19.11024
KEGG:cal:CaO19.3540 Uniprot:Q59ZH9
Length = 782
Score = 410 (149.4 bits), Expect = 5.4e-40, Sum P(2) = 5.4e-40
Identities = 108/318 (33%), Positives = 176/318 (55%)
Query: 155 PDDAEEELVS--EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
PDD E L + E ++ + A+ + + +L FK+PTPIQK IP A GK
Sbjct: 185 PDDNEINLPNWQEGDLGSSISAYT--------LYGLSQLDFKKPTPIQKETIPIAL-SGK 235
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
D+IG A TGSGKTLA+G+PI+++ ++ ++++ ++ + P G +I PT
Sbjct: 236 -DVIGKATTGSGKTLAYGIPILEKYIQSLN----LIKQNNKDKKINHPTG----IIFAPT 286
Query: 273 RELALQVTDHLKEVAK--GINVR-VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 329
RELA QV DHL ++AK ++ R +V I GG+S +KQ+RLL+ P ++V TPGR+ EL+
Sbjct: 287 RELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPGRMLELVQ 346
Query: 330 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS 389
G + L ++ VLDEADR++++GHF E + I+++ G N +S+ +
Sbjct: 347 GDSELAKRLASIDIIVLDEADRLLQDGHFDEFEKILELF----GKNRPKSKSIEW----- 397
Query: 390 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIV 448
K QTLVFSAT + FRK +H K + ++ L+E+ + +V
Sbjct: 398 -----KWQTLVFSATFSRDL-FRKLDRHQKGKSSSLMGNDEIVQLLNEKLKFKDKKPTLV 451
Query: 449 DLTNVSVLANKLEESFIE 466
D +++ ++ E+ +E
Sbjct: 452 DANPKEIVSGQITEALVE 469
Score = 48 (22.0 bits), Expect = 5.4e-40, Sum P(2) = 5.4e-40
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 13 SKETKP-NRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEID 70
SK KP +++ +K + K L+W DN +G E GF LEEID
Sbjct: 10 SKPRKPPTLKQKLKKESKVVKAKDLQWKL-VDIPDN------LGDYE---GFYGLEEID 58
>WB|WBGene00018890 [details] [associations]
symbol:F55F8.2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040002 "collagen and cuticulin-based cuticle
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003676 GO:GO:0040035 GO:GO:0040002 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K14805 HOGENOM:HOG000290702 GeneTree:ENSGT00550000074847
OMA:VEEGYFA EMBL:FO081477 PIR:T29584 RefSeq:NP_491652.1
ProteinModelPortal:P91340 SMR:P91340 STRING:P91340 PaxDb:P91340
PRIDE:P91340 EnsemblMetazoa:F55F8.2a GeneID:172223
KEGG:cel:CELE_F55F8.2 UCSC:F55F8.2a CTD:172223 WormBase:F55F8.2a
InParanoid:P91340 NextBio:874573 ArrayExpress:P91340 Uniprot:P91340
Length = 746
Score = 416 (151.5 bits), Expect = 3.3e-38, P = 3.3e-38
Identities = 97/249 (38%), Positives = 143/249 (57%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPL-LMKSIYRLGFKEPTPIQKACIPAAAHQG 211
NG ++ EA T+ AW + P ++++I ++GF EPT IQ A +PAA
Sbjct: 134 NGDTGKPKKSKKEASKKTDISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRD- 192
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 271
+ D++GAAETGSGKTLAFG+P++ RLLE + + ++ E E P RALI+ P
Sbjct: 193 RQDVLGAAETGSGKTLAFGIPLVARLLESSDDS-----QETESTEVRGP----RALIVAP 243
Query: 272 TRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL-KARPELVVGTPGRLWELMSG 330
TREL +Q+ H+ + + IVGG++ KQER++ + RP++VV TPGRLW +M
Sbjct: 244 TRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQE 303
Query: 331 GE--KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTV 388
E + L E L V+DE DRM+E G+F EL I++ + E + E+ QT V
Sbjct: 304 AETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKI-----HEESEKEKLQTLVFS 358
Query: 389 SSLQRKKRQ 397
++L K Q
Sbjct: 359 ATLTFAKAQ 367
Score = 119 (46.9 bits), Expect = 0.00078, P = 0.00078
Identities = 56/225 (24%), Positives = 104/225 (46%)
Query: 246 KMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTE 304
++LE + E + + RALI+ PTREL +Q+ H+ + + IVGG++
Sbjct: 217 RLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQV 276
Query: 305 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 364
KQER++ + +V + + G + ++ EA+ +++L+ +
Sbjct: 277 KQERIISQQRPDIV--------VATPGRL---------WAMMQEAETGEFLAEWKDLKCL 319
Query: 365 IDMLPMTNGS-NEGQ-SEQTQTCVTV-SSLQRKKRQTLVFSATIALSADFRKKLKHGSLK 421
+ + T+ EG +E T + +++K QTLVFSAT+ A + + K
Sbjct: 320 V--VDETDRMVEEGYFAELTHILNKIHEESEKEKLQTLVFSATLTF-AKAQDVAEEEKKK 376
Query: 422 LKQSVNGLNSIETLSERAGMRANV-AIVDLTNVSVLANKLEESFI 465
K+ ++ I+ L + G+R N ++DLT A L E+ I
Sbjct: 377 AKE-LSSQQKIQRLIKLTGLRENKHKVIDLTRQMGTAGCLVEARI 420
>UNIPROTKB|F1NJ62 [details] [associations]
symbol:F1NJ62 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074847 EMBL:AADN02003663 EMBL:AADN02003664
EMBL:AADN02003665 EMBL:AADN02034739 IPI:IPI00571504
Ensembl:ENSGALT00000017692 Uniprot:F1NJ62
Length = 851
Score = 290 (107.1 bits), Expect = 5.0e-37, Sum P(3) = 5.0e-37
Identities = 58/122 (47%), Positives = 78/122 (63%)
Query: 261 KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGT 320
K L L++TPTRELA+QV H+ VAK ++ +VGGM+ +KQER+L +PE+V+ T
Sbjct: 391 KRPLLGLVLTPTRELAVQVKHHIDAVAKFTGIKTAILVGGMAAQKQERVLNRKPEIVIAT 450
Query: 321 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE 380
PGRLWEL+ HL L L V+DEADRM+E GHF EL ++++L N S
Sbjct: 451 PGRLWELIKERHPHLSNLRQLRCLVIDEADRMVERGHFLELSQLLEVL---NDSQYNPKR 507
Query: 381 QT 382
QT
Sbjct: 508 QT 509
Score = 119 (46.9 bits), Expect = 5.0e-37, Sum P(3) = 5.0e-37
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAA 219
E L + + + AW +L + ++K++ LGF PTPIQ +P+A +DI+GAA
Sbjct: 182 EVLSTSTDHKADVSAWKDLFVPQPVLKALSSLGFSAPTPIQALTLPSAIRDN-MDILGAA 240
Query: 220 ETGSGKTLAFGLPIMQRL 237
ETG L P++ ++
Sbjct: 241 ETGIN-LLTVSFPVISQI 257
Score = 79 (32.9 bits), Expect = 5.0e-37, Sum P(3) = 5.0e-37
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 395 KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVS 454
KRQT VFSAT+ L ++ K + ++ +E L E+ G++ ++DLT
Sbjct: 506 KRQTFVFSATLTLVHQTPARILQK--KNAKKIDKKTKLEMLMEKVGIKGKPKVIDLTRKE 563
Query: 455 VLANKLEESFI 465
L E+ I
Sbjct: 564 ATVETLMETRI 574
>SGD|S000000346 [details] [associations]
symbol:MAK5 "Essential nucleolar protein" species:4932
"Saccharomyces cerevisiae" [GO:0000466 "maturation of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000000346 GO:GO:0005524 GO:GO:0005730
EMBL:BK006936 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000463 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000466 KO:K14805
HOGENOM:HOG000290702 GeneTree:ENSGT00550000074847 EMBL:X78937
OrthoDB:EOG44J5S7 EMBL:Z36011 PIR:S46011 RefSeq:NP_009700.1
ProteinModelPortal:P38112 SMR:P38112 DIP:DIP-6337N IntAct:P38112
MINT:MINT-612928 STRING:P38112 PaxDb:P38112 PeptideAtlas:P38112
EnsemblFungi:YBR142W GeneID:852439 KEGG:sce:YBR142W CYGD:YBR142w
OMA:HLPRAAD NextBio:971336 Genevestigator:P38112 GermOnline:YBR142W
Uniprot:P38112
Length = 773
Score = 365 (133.5 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 104/303 (34%), Positives = 163/303 (53%)
Query: 175 WNELR-LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
W L L +++S+ L F PT IQK IP QG VD++G A TGSGKTLA+G+PI
Sbjct: 172 WTNLAPLSMTILQSLQNLNFLRPTEIQKKSIPVIM-QG-VDVMGKASTGSGKTLAYGIPI 229
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+++L+ +K ++ P +LI TPTRELA QVTDHLK++ + + +
Sbjct: 230 VEKLISN-------FSQKNKK-----PI----SLIFTPTRELAHQVTDHLKKICEPVLAK 273
Query: 294 ----VVPIVGGMSTEKQERLLKA--RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
++ + GG+S +KQ+RLLK ++V+ TPGR EL+ + ++ +LD
Sbjct: 274 SQYSILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVNTLILD 333
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADR++++GHF E + II L + N SE + K QTL+FSAT ++
Sbjct: 334 EADRLLQDGHFDEFEKIIKHLLVERRKNRENSEGSS----------KIWQTLIFSATFSI 383
Query: 408 SADFRKKLKHGSLK---LKQSVNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEES 463
F K +K K + + LN+ I+ L + + I+D S ++++++ES
Sbjct: 384 DL-FDKLSSSRQVKDRRFKNNEDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKES 442
Query: 464 FIE 466
IE
Sbjct: 443 LIE 445
Score = 41 (19.5 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 8/10 (80%), Positives = 8/10 (80%)
Query: 61 GGFLSLEEID 70
GGF LEEID
Sbjct: 41 GGFYGLEEID 50
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 357 (130.7 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 88/244 (36%), Positives = 147/244 (60%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
+ I +WNE ++ I ++G+KEPTPIQ+ IP Q + DIIG AETG
Sbjct: 384 IKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGL-QNR-DIIGVAETG 441
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 282
SGKTLAF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ +
Sbjct: 442 SGKTLAFLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEE 490
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
+ + + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ +
Sbjct: 491 TTKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCT 547
Query: 343 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVF 401
+ VLDEADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F
Sbjct: 548 YIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMF 607
Query: 402 SATI 405
+AT+
Sbjct: 608 TATM 611
Score = 38 (18.4 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 11 EHSKETKPNRRKRTRKSREAEKLNSLKWN 39
E KE + R K+ ++ + +K + W+
Sbjct: 333 EAEKEQEKVRLKKMKRKEDKQKWDDRHWS 361
>POMBASE|SPBC4F6.07c [details] [associations]
symbol:SPBC4F6.07c "ATP-dependent RNA helicase Mak5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC4F6.07c
GO:GO:0005524 GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14805 HOGENOM:HOG000290702
OMA:VEEGYFA OrthoDB:EOG44J5S7 PIR:T40504 RefSeq:NP_596107.1
ProteinModelPortal:O74393 STRING:O74393 EnsemblFungi:SPBC4F6.07c.1
GeneID:2540874 KEGG:spo:SPBC4F6.07c NextBio:20801990 Uniprot:O74393
Length = 648
Score = 239 (89.2 bits), Expect = 6.0e-32, Sum P(4) = 6.0e-32
Identities = 46/111 (41%), Positives = 73/111 (65%)
Query: 263 HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPG 322
+++AL++ PTRELA Q+ H + + N+RV+ I GG++ +KQ+RLL P +VV TPG
Sbjct: 192 YVQALVVAPTRELAHQICQHFELIKPSPNIRVMSITGGLAVQKQQRLLNKHPHVVVATPG 251
Query: 323 RLWELMSGGEKHLV-ELHTLSFFVLDEADRMIENGHFRELQSIIDML--PM 370
RLW +++ E +L + VLDEADR+++ HF EL ++++L PM
Sbjct: 252 RLWSVIN--ENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEILGNPM 300
Score = 155 (59.6 bits), Expect = 6.0e-32, Sum P(4) = 6.0e-32
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW L P ++ S+ + GF +P PIQ IP A+ G DIIG A+TGSGKTLAFG
Sbjct: 120 DVSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASI-G-FDIIGKADTGSGKTLAFG 177
Query: 231 LPIMQRLL 238
+PI++ L
Sbjct: 178 IPILEHCL 185
Score = 53 (23.7 bits), Expect = 6.0e-32, Sum P(4) = 6.0e-32
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 395 KRQTLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTN 452
+RQT +FSAT L +K +K G++ K + + +E + + +D
Sbjct: 303 QRQTFIFSATFDEGLQQRLKKNMK-GNITEKYN----SPMENMLKEVRFFGKPKFLDANP 357
Query: 453 VSVLANKLEESFIE 466
S +A+++ E IE
Sbjct: 358 QSAVASRVLEGLIE 371
Score = 44 (20.5 bits), Expect = 6.0e-32, Sum P(4) = 6.0e-32
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 14 KETKPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDE 71
K+ KP +RK+ +K +K + + + NE F +LEE DE
Sbjct: 60 KDKKPEKRKKDQKEASEKKKKGKRTSPTIEMTSLGSKVTSKNYNE----FSTLEEEDE 113
Score = 37 (18.1 bits), Expect = 3.1e-31, Sum P(4) = 3.1e-31
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 33 LNSLKWNSSFSAADNDPFAFLVGSNELDG 61
L+ LKW D F +G E++G
Sbjct: 7 LDELKWKEVKLPDHLDDFDGFMGLEEIEG 35
Score = 37 (18.1 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 248 LEE-KGEEAEKYAPKGHLRALI 268
LEE +G + KY PKG ++ +I
Sbjct: 30 LEEIEGVDI-KYQPKGAMKEVI 50
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 337 (123.7 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
Identities = 85/233 (36%), Positives = 139/233 (59%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L P +++ I + G+K+PTPIQ+ IP Q + DIIG AETGSGKT AF +P++
Sbjct: 380 WKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGL-QNR-DIIGVAETGSGKTAAFLIPLL 437
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K ++ E++++ P A+I+ PTRELA Q+ + + K + +R
Sbjct: 438 V-WITTLPKIDRI-----EDSDQ-GPY----AIILAPTRELAQQIEEETIKFGKPLGIRT 486
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 487 VAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDEADRMID 543
Query: 355 NGHFRELQSIIDMLPMTNGSNE-GQSEQTQTCV-TVSSLQRKKRQTLVFSATI 405
G ++Q I++ +P+TN + +E + + S + K RQT++F+AT+
Sbjct: 544 MGFEPDVQKILEYIPVTNQKPDTDDAEDPEKMMQNFESGKHKYRQTVMFTATM 596
Score = 41 (19.5 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 11 EHSKETKPNRRKRTRKSREAEKLNS 35
E ++ P R ++ +SRE ++ S
Sbjct: 29 ERDRKGSPGRERKRHRSRERKRSRS 53
Score = 39 (18.8 bits), Expect = 5.1e-31, Sum P(2) = 5.1e-31
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 14 KETKPNRRKRTRKSREAEKLNSLKWN 39
KE + R K+ RK ++ + W+
Sbjct: 320 KEQEEQRLKKVRKKEAKQRWDDRHWS 345
Score = 38 (18.4 bits), Expect = 6.5e-31, Sum P(2) = 6.5e-31
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 17 KPNRRKRTRKSREAEK 32
K R R+RK RE E+
Sbjct: 67 KDRDRDRSRKDRERER 82
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 310 (114.2 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 70/196 (35%), Positives = 122/196 (62%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L L P +++++ G++EPTPIQ+ IPA +G+ D++ +A+TG+GKT F LP+
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVL-EGR-DLMASAQTGTGKTAGFTLPL 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q L+ + A KG P +RALI+TPTRELA Q+ +++++ +K +N+R
Sbjct: 60 LQHLITRQPHA------KGRR-----P---VRALILTPTRELAAQIGENVRDYSKYLNIR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ + GG+S Q L+ +++V TPGRL +L ++ V+L + VLDEADRM+
Sbjct: 106 SLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRML 162
Query: 354 ENGHFRELQSIIDMLP 369
+ G +++ ++ LP
Sbjct: 163 DMGFIHDIRRVLTKLP 178
Score = 48 (22.0 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 395 KRQTLVFSATIA--LSADFRKKLKHGSLKLK 423
KRQ L+FSAT + + A +KL H L+++
Sbjct: 180 KRQNLLFSATFSDDIKA-LAEKLLHNPLEIE 209
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 313 (115.2 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 75/196 (38%), Positives = 118/196 (60%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L L+ L+ ++ LG+++PTPIQ IPA K D++ A+TG+GKT AF LPI
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILT--KQDVMAGAQTGTGKTAAFALPI 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q L M + + + A K +RAL++ PTRELALQV + AKG ++R
Sbjct: 60 LQLL---------MADNQSDHAAKA-----IRALVLVPTRELALQVQQSFVKYAKGTDIR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V GG+S E Q+ + A ++++ TPGRL + + G +L +L+TL F DEADRM+
Sbjct: 106 VGIAYGGVSIEAQQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVF---DEADRML 162
Query: 354 ENGHFRELQSIIDMLP 369
+ G E+Q+++ +P
Sbjct: 163 DMGFMDEIQAVLKQVP 178
Score = 44 (20.5 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 395 KRQTLVFSATIALSA-DFRKKL 415
+RQTL+FSAT+ S F K L
Sbjct: 180 QRQTLLFSATLDDSIFSFSKNL 201
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 313 (115.2 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 75/196 (38%), Positives = 118/196 (60%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L L+ L+ ++ LG+++PTPIQ IPA K D++ A+TG+GKT AF LPI
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILT--KQDVMAGAQTGTGKTAAFALPI 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q L M + + + A K +RAL++ PTRELALQV + AKG ++R
Sbjct: 60 LQLL---------MADNQSDHAAKA-----IRALVLVPTRELALQVQQSFVKYAKGTDIR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V GG+S E Q+ + A ++++ TPGRL + + G +L +L+TL F DEADRM+
Sbjct: 106 VGIAYGGVSIEAQQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVF---DEADRML 162
Query: 354 ENGHFRELQSIIDMLP 369
+ G E+Q+++ +P
Sbjct: 163 DMGFMDEIQAVLKQVP 178
Score = 44 (20.5 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 395 KRQTLVFSATIALSA-DFRKKL 415
+RQTL+FSAT+ S F K L
Sbjct: 180 QRQTLLFSATLDDSIFSFSKNL 201
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 337 (123.7 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 86/241 (35%), Positives = 143/241 (59%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+I +W + L P +++ I + G+KEPTPIQ+ IP Q + DIIG AETGSGKT
Sbjct: 384 KIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNR-DIIGVAETGSGKT 441
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 442 AAFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKF 490
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VL
Sbjct: 491 GKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVL 547
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNE-GQSEQTQTCVT-VSSLQRKKRQTLVFSAT 404
DEADRMI+ G ++Q I++ +P++N + ++E + + S + K RQT++F+AT
Sbjct: 548 DEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTAT 607
Query: 405 I 405
+
Sbjct: 608 M 608
Score = 39 (18.8 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 4 GSPTLTYEHSKETKPNRRKRTRKSREAEK 32
GS + + SK T+ R+R K RE +K
Sbjct: 55 GSRSRSRSRSKSTE---RERRHKERERDK 80
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 337 (123.7 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 86/241 (35%), Positives = 143/241 (59%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+I +W + L P +++ I + G+KEPTPIQ+ IP Q + DIIG AETGSGKT
Sbjct: 385 KIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNR-DIIGVAETGSGKT 442
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 443 AAFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKF 491
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VL
Sbjct: 492 GKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVL 548
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNE-GQSEQTQTCVT-VSSLQRKKRQTLVFSAT 404
DEADRMI+ G ++Q I++ +P++N + ++E + + S + K RQT++F+AT
Sbjct: 549 DEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
Score = 39 (18.8 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 4 GSPTLTYEHSKETKPNRRKRTRKSREAEK 32
GS + + SK T+ R+R K RE +K
Sbjct: 56 GSRSRSRSRSKSTE---RERRHKERERDK 81
>FB|FBgn0034496 [details] [associations]
symbol:CG9143 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AE013599
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K14805 GeneTree:ENSGT00550000074847
OMA:DAYLYYI EMBL:BT010296 RefSeq:NP_611467.1 UniGene:Dm.22095
SMR:Q6NQY9 STRING:Q6NQY9 EnsemblMetazoa:FBtr0086304 GeneID:37296
KEGG:dme:Dmel_CG9143 UCSC:CG9143-RA FlyBase:FBgn0034496
InParanoid:Q6NQY9 OrthoDB:EOG4VQ84N GenomeRNAi:37296 NextBio:802980
Uniprot:Q6NQY9
Length = 813
Score = 333 (122.3 bits), Expect = 6.9e-31, Sum P(2) = 6.9e-31
Identities = 87/222 (39%), Positives = 125/222 (56%)
Query: 244 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMST 303
+G EE E + + L L++TPTRELA+QV +HL AK +RV I GG++
Sbjct: 321 SGASDEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFGGLAV 380
Query: 304 EKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 363
KQER+L+ P++VV TPGRLWEL + G +HL ++ +SF V+DE DRM+E GHF EL+S
Sbjct: 381 AKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEKGHFEELRS 440
Query: 364 IIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK-- 421
++ +L S+E + Q Q V ++L TLV D +K G
Sbjct: 441 LLKVL----NSDEQKKHQRQNFVYSATL------TLVHDLP-----DHMQKRNVGKRPKF 485
Query: 422 LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
+KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 486 VKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 524
Score = 204 (76.9 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 60/181 (33%), Positives = 94/181 (51%)
Query: 146 EESVTVSNGPDDAEEELV--SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
E+S D+ ELV S E + + AWN L + +++++ GFK PT IQ
Sbjct: 187 EDSADQQESTDEEAPELVPISTGE-AEDMSAWNGLGVPASILRALGEQGFKTPTQIQALT 245
Query: 204 IPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK---AG--KMLEEKGEEAEKY 258
+PAA H GK DI+GAAETGSGKTLAFG+P++ ++E +++ +G K + KG++ E
Sbjct: 246 LPAAIH-GKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPA 304
Query: 259 APKGHLRALIITPTREL--ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 316
A + L P EL +D + + P+ G + T +E ++ + L
Sbjct: 305 ADEHELTP----PPEELDHVSGASDEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHL 360
Query: 317 V 317
V
Sbjct: 361 V 361
Score = 42 (19.8 bits), Expect = 6.9e-31, Sum P(2) = 6.9e-31
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 234 MQRLLEEREKAGKMLEEKGEEAEK 257
MQ+L E+REK ++ ++K + ++
Sbjct: 130 MQKLREKREKRKELRKQKKSKGKE 153
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 327 (120.2 bits), Expect = 6.3e-30, Sum P(2) = 6.3e-30
Identities = 87/234 (37%), Positives = 127/234 (54%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E +L L+K++ R G+K+P+PIQ A IP Q D+IG AETGSGKT AF LP+
Sbjct: 314 SWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQR--DVIGIAETGSGKTAAFVLPM 371
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + L EE E P A+++ PTRELA Q+ + + A + R
Sbjct: 372 LAYI--------SRLPPMSEENETEGPY----AVVMAPTRELAQQIEEETVKFAHYLGFR 419
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V IVGG S E+Q + E+V+ TPGRL + + E+ L+ ++ VLDEADRMI
Sbjct: 420 VTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMI 476
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSATI 405
+ G ++ ++D +P +N E + E+ L KK R T +FSAT+
Sbjct: 477 DMGFEPQVAGVLDAMPSSNLKPENEEEE---------LDEKKIYRTTYMFSATM 521
Score = 37 (18.1 bits), Expect = 6.3e-30, Sum P(2) = 6.3e-30
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 14 KETKPNRRKRTRKSREAE 31
++ +P+RR R K RE E
Sbjct: 123 RDREPDRRNR-EKEREEE 139
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 302 (111.4 bits), Expect = 9.7e-30, Sum P(2) = 9.7e-30
Identities = 69/184 (37%), Positives = 111/184 (60%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
L+K++ G+K TPIQ+ IP QG VD++ +A+TG+GKT AF LPI+ + +
Sbjct: 12 LLKAVKACGYKNLTPIQQEAIPVI-RQG-VDLLASAQTGTGKTAAFSLPILDAIAKANHA 69
Query: 244 AGKMLEEKGEE-AEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGM 301
A E AE+ + G +RALI+TPTRELA QV D++K+ ++ + ++ + GG
Sbjct: 70 AKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPIKSGVVYGGG 129
Query: 302 STEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 361
Q ++LK +++V TPGRL E ++ V+L + F VLDEADRM++ G ++
Sbjct: 130 KMASQTKMLKQGLDVLVATPGRLLEHLA---LRNVDLSQVKFLVLDEADRMLDMGFLTDI 186
Query: 362 QSII 365
+ ++
Sbjct: 187 EKLL 190
Score = 45 (20.9 bits), Expect = 9.7e-30, Sum P(2) = 9.7e-30
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 393 RKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVN 427
+ K QTL+FSAT + D K L + LK ++++
Sbjct: 194 KHKHQTLMFSATFS---DRVKSLANQLLKSPKTIS 225
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 337 (123.7 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 92/274 (33%), Positives = 154/274 (56%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W+E L L++ + R+G+KEPTPIQ+A IP A Q + D+IG A TGSGKT AF LP+
Sbjct: 347 SWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAM-QSR-DLIGVAVTGSGKTAAFLLPL 404
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + E ++E E + P A+++ PTRELA Q+ K+ + +
Sbjct: 405 LCYIAELPR-----IDEF-EWRKNDGPY----AIVLAPTRELAQQIEIEAKKFTEPLGFN 454
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI
Sbjct: 455 VVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCI---ERRMLVLSQCCYVIMDEADRMI 511
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSATIALSAD- 410
+ G + I+D LP+TN + + + + ++ + S R RQT++++AT+ + +
Sbjct: 512 DLGFEEPVNKILDALPVTNEKPDTEEAEDSSAMSRHLGSKDRY-RQTMMYTATMPTAVER 570
Query: 411 -FRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
RK L+ ++ S +++T+ +R M A
Sbjct: 571 IARKYLRRPAIVTIGSAG--EAVDTVEQRVEMIA 602
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 337 (123.7 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 86/241 (35%), Positives = 143/241 (59%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+I +W + L P +++ I + G+KEPTPIQ+ IP Q + DIIG AETGSGKT
Sbjct: 385 KIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNR-DIIGVAETGSGKT 442
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 443 AAFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKF 491
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VL
Sbjct: 492 GKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVL 548
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNE-GQSEQTQTCVT-VSSLQRKKRQTLVFSAT 404
DEADRMI+ G ++Q I++ +P++N + ++E + + S + K RQT++F+AT
Sbjct: 549 DEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 337 (123.7 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 86/241 (35%), Positives = 143/241 (59%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+I +W + L P +++ I + G+KEPTPIQ+ IP Q + DIIG AETGSGKT
Sbjct: 385 KIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNR-DIIGVAETGSGKT 442
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 443 AAFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKF 491
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VL
Sbjct: 492 GKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVL 548
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNE-GQSEQTQTCVT-VSSLQRKKRQTLVFSAT 404
DEADRMI+ G ++Q I++ +P++N + ++E + + S + K RQT++F+AT
Sbjct: 549 DEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 299 (110.3 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 78/205 (38%), Positives = 116/205 (56%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+ S+ ++ EL + L + LG+ PTP+Q A IPA G+ D++ A TGSGKT
Sbjct: 3 QASSSVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVL-SGR-DVLAGANTGSGKT 60
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
AF LP++QRL E + A+K A G +R L++ PTRELA QV D
Sbjct: 61 AAFALPLLQRLSEAKS------------ADKSA--GVVRCLVLVPTRELAQQVADSFLSY 106
Query: 287 AKGIN--VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
A N +++V GG+S Q + L+A +++V TPGRL +L++ + ++L +S F
Sbjct: 107 ASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVLVATPGRLLDLLAS---NALKLTQVSAF 163
Query: 345 VLDEADRMIENGHFRELQSIIDMLP 369
VLDEADRM+ G EL+ ++ LP
Sbjct: 164 VLDEADRMLSLGFTEELEQVLAALP 188
Score = 42 (19.8 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 10/17 (58%), Positives = 15/17 (88%)
Query: 388 VSSLQRKKRQTLVFSAT 404
+++L R+K QTL+FSAT
Sbjct: 184 LAALPRQK-QTLLFSAT 199
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 299 (110.3 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 78/205 (38%), Positives = 116/205 (56%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+ S+ ++ EL + L + LG+ PTP+Q A IPA G+ D++ A TGSGKT
Sbjct: 3 QASSSVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVL-SGR-DVLAGANTGSGKT 60
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
AF LP++QRL E + A+K A G +R L++ PTRELA QV D
Sbjct: 61 AAFALPLLQRLSEAKS------------ADKSA--GVVRCLVLVPTRELAQQVADSFLSY 106
Query: 287 AKGIN--VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
A N +++V GG+S Q + L+A +++V TPGRL +L++ + ++L +S F
Sbjct: 107 ASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVLVATPGRLLDLLAS---NALKLTQVSAF 163
Query: 345 VLDEADRMIENGHFRELQSIIDMLP 369
VLDEADRM+ G EL+ ++ LP
Sbjct: 164 VLDEADRMLSLGFTEELEQVLAALP 188
Score = 42 (19.8 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 10/17 (58%), Positives = 15/17 (88%)
Query: 388 VSSLQRKKRQTLVFSAT 404
+++L R+K QTL+FSAT
Sbjct: 184 LAALPRQK-QTLLFSAT 199
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 320 (117.7 bits), Expect = 2.7e-29, Sum P(2) = 2.7e-29
Identities = 84/235 (35%), Positives = 137/235 (58%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+I +W + L P +++ I + G+KEPTPIQ+ IP Q + DIIG AETGSGKT
Sbjct: 385 KIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNR-DIIGVAETGSGKT 442
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 443 AAFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKF 491
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VL
Sbjct: 492 GKPLGIRPVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVL 548
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNE-GQSEQTQTCVT-VSSLQRKKRQTL 399
DEADRMI+ G ++Q I++ +P++N + ++E + + S + K RQTL
Sbjct: 549 DEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTL 603
Score = 40 (19.1 bits), Expect = 2.7e-29, Sum P(2) = 2.7e-29
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 4 GSPTLTYEHSKETKPNRRKRTRKSREAEK 32
GS + + SK T+ +RR + R+ R+ E+
Sbjct: 56 GSRSRSRSRSKSTERDRRHKERE-RDKER 83
>CGD|CAL0001091 [details] [associations]
symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
Uniprot:Q59W52
Length = 581
Score = 327 (120.2 bits), Expect = 6.8e-29, P = 6.8e-29
Identities = 85/233 (36%), Positives = 132/233 (56%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
WNE ++ L+ I +LG++EPT +Q+A IP A K D++G AETGSGKTLAF +P++
Sbjct: 170 WNEGSINDKLVSIISQLGYEEPTSVQRASIPLALK--KRDVVGVAETGSGKTLAFLIPVL 227
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+L E K E+ E P G LI+ PTRELALQ+T ++ K + +V
Sbjct: 228 NYILSIDENYLKY-EKISNE-----PVG----LILAPTRELALQITKEAEKFCKKLGYQV 277
Query: 295 VPIVGGMSTEKQ-ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+PI+GG + ++ + L+V TPGRL + + E+ +V+L V+DEADRMI
Sbjct: 278 LPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSI---ERKIVDLSKCYCLVMDEADRMI 334
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G ++L ++D LP +Q + + +KR T++F+ATI+
Sbjct: 335 DMGFEKDLNKVLDKLPT--------EKQLSSTIDGRIFHLEKRSTMMFTATIS 379
>UNIPROTKB|Q59W52 [details] [associations]
symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
KEGG:cal:CaO19.8289 Uniprot:Q59W52
Length = 581
Score = 327 (120.2 bits), Expect = 6.8e-29, P = 6.8e-29
Identities = 85/233 (36%), Positives = 132/233 (56%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
WNE ++ L+ I +LG++EPT +Q+A IP A K D++G AETGSGKTLAF +P++
Sbjct: 170 WNEGSINDKLVSIISQLGYEEPTSVQRASIPLALK--KRDVVGVAETGSGKTLAFLIPVL 227
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+L E K E+ E P G LI+ PTRELALQ+T ++ K + +V
Sbjct: 228 NYILSIDENYLKY-EKISNE-----PVG----LILAPTRELALQITKEAEKFCKKLGYQV 277
Query: 295 VPIVGGMSTEKQ-ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+PI+GG + ++ + L+V TPGRL + + E+ +V+L V+DEADRMI
Sbjct: 278 LPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSI---ERKIVDLSKCYCLVMDEADRMI 334
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G ++L ++D LP +Q + + +KR T++F+ATI+
Sbjct: 335 DMGFEKDLNKVLDKLPT--------EKQLSSTIDGRIFHLEKRSTMMFTATIS 379
>UNIPROTKB|F5GYL3 [details] [associations]
symbol:DDX24 "ATP-dependent RNA helicase DDX24"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL079302 GO:GO:0008026 HGNC:HGNC:13266 ChiTaRS:DDX24
IPI:IPI00911118 ProteinModelPortal:F5GYL3 SMR:F5GYL3
Ensembl:ENST00000544005 ArrayExpress:F5GYL3 Bgee:F5GYL3
Uniprot:F5GYL3
Length = 609
Score = 327 (120.2 bits), Expect = 8.1e-29, P = 8.1e-29
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 112 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 170
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 171 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 230
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQT----QTCVTVSSLQRK---KRQTLVFSATIALSA 409
HF EL +++ML N S QT T V + K+ T T L
Sbjct: 231 HFAELSQLLEML---NDSQYNPKRQTLVFSATLTLVHQAPARILHKKHTKKMDKTAKLDL 287
Query: 410 DFRKKLKHGSLKLKQSVNGLNSIETLSE 437
+K G K+ ++ETL+E
Sbjct: 288 LMQKIGMRGKPKVIDLTRNEATVETLTE 315
>UNIPROTKB|A6H7B6 [details] [associations]
symbol:DDX24 "DDX24 protein" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14805 CTD:57062
HOGENOM:HOG000290702 HOVERGEN:HBG104200 OMA:DQQEERR
GeneTree:ENSGT00550000074847 OrthoDB:EOG45TCMP EMBL:DAAA02053048
EMBL:BC146184 IPI:IPI00687716 RefSeq:NP_001092515.1 UniGene:Bt.9433
Ensembl:ENSBTAT00000004441 GeneID:529613 KEGG:bta:529613
InParanoid:A6H7B6 NextBio:20875064 Uniprot:A6H7B6
Length = 852
Score = 329 (120.9 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 93/260 (35%), Positives = 136/260 (52%)
Query: 191 LGFKEPTPIQKA--CIPAAAHQ-GKVDIIGAAETGSG-KTLAFGLPIMQR---LLE--ER 241
+G K TP +A I AAA G G + G G +L P ++ +E +
Sbjct: 303 VGAKTGTPPSQAGTSIGAAASDPGLPSRDGDGDAGEGPSSLIREKPTPEQEDNQVEKHDE 362
Query: 242 EKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGM 301
E+AGK+ +E G PK L L++TPTRELA+QV H+ VAK +++ +VGGM
Sbjct: 363 EQAGKLKQELG--GSTVPPKRPLLGLVLTPTRELAVQVKQHVDAVAKFTSIKTAILVGGM 420
Query: 302 STEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 361
ST+KQ+R+L +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL
Sbjct: 421 STQKQQRMLNRQPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAEL 480
Query: 362 QSIIDMLPMTNGSNEGQS---EQTQTCVTVSSLQ-RKKRQTLVFSATIALSADFRKKLKH 417
+++ML + + + Q+ T T V + + K+ T L +K
Sbjct: 481 SQLLEMLSDSQYNPKRQTLVFSATLTLVHQAPARILHKKHAKKMDKTAKLDLLMQKIGMR 540
Query: 418 GSLKLKQSVNGLNSIETLSE 437
G K+ ++ETL+E
Sbjct: 541 GKPKVIDLTRKEATVETLTE 560
Score = 153 (58.9 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 34/89 (38%), Positives = 54/89 (60%)
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
P A+ + + + AW +L + +++++ LGF PTPIQ + A A + K+D
Sbjct: 173 PKKAKTWMPEMHDHKADVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-APAIRDKLD 231
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREK 243
I+GAAETGSGKTLAF +P++ +L + K
Sbjct: 232 ILGAAETGSGKTLAFAIPMIDAVLRWQVK 260
Score = 92 (37.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 27/88 (30%), Positives = 43/88 (48%)
Query: 379 SEQTQTCVTVSSLQ-RKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSE 437
+E +Q +S Q KRQTLVFSAT+ L ++ H K + ++ ++ L +
Sbjct: 478 AELSQLLEMLSDSQYNPKRQTLVFSATLTLVHQAPARILHK--KHAKKMDKTAKLDLLMQ 535
Query: 438 RAGMRANVAIVDLTNVSVLANKLEESFI 465
+ GMR ++DLT L E+ I
Sbjct: 536 KIGMRGKPKVIDLTRKEATVETLTETKI 563
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 320 (117.7 bits), Expect = 8.1e-28, P = 8.1e-28
Identities = 76/233 (32%), Positives = 133/233 (57%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E + +++ +G+ EPTPIQ+ IP Q + D+IG AETGSGKT AF LP++
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGL-QNR-DVIGVAETGSGKTAAFLLPLL 360
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ KM ++ + YA +I+ PTRELA Q+ + + K + ++
Sbjct: 361 VWITS----LPKMERQEHRDLGPYA-------IIMAPTRELAQQIEEETNKFGKLLGIKT 409
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG S E Q L+ E+V+ TPGRL +++ ++L+ L+ ++ +LDEADRM++
Sbjct: 410 VSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLEN--RYLL-LNQCTYVILDEADRMLD 466
Query: 355 NGHFRELQSIIDMLPMTNGSNE-GQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
G ++Q +++ +P TN + + + + + S + K RQT++F+AT++
Sbjct: 467 MGFEPDVQKVLEYMPDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFTATMS 519
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 310 (114.2 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 72/194 (37%), Positives = 115/194 (59%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
EL + L+K+ RLG+K P+ IQ +P A +GK D+IG A+TGSGKT AF +PI+Q
Sbjct: 13 ELGVREELVKACERLGWKNPSKIQAEALPFAL-EGK-DVIGLAQTGSGKTGAFAIPILQA 70
Query: 237 LLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
LLE + + + ++ + P A +++PTRELA+Q+ + + + I++R
Sbjct: 71 LLEY------VYDSEPKKGRR--PDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAV 122
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGG+ +Q L RP ++V TPGRLW+ MS + L +L + VLDEADR++
Sbjct: 123 LVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGF--SLKSLKYLVLDEADRLLNED 180
Query: 357 HFRELQSIIDMLPM 370
+ L I++ +P+
Sbjct: 181 FEKSLNQILEEIPL 194
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 296 (109.3 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 75/194 (38%), Positives = 112/194 (57%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++L L L+ ++ LG PTPIQ+ IP QGK D++ A+TG+GKT AFGLP++
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVL-QGK-DVLAGAQTGTGKTAAFGLPLI 65
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QR +E+ + E +E +RAL++ PTRELA QV D L+ AKG +++
Sbjct: 66 QRFIEQPWQR----EANSKE---------IRALVLVPTRELAQQVLDSLQAYAKGTELKI 112
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GG S + Q L+ ++++ TPGRL L K L L + VLDEADRM++
Sbjct: 113 VAVYGGTSMKVQLNHLRGGVDILIATPGRL--LDHAHVKSLF-LGKVEVLVLDEADRMLD 169
Query: 355 NGHFRELQSIIDML 368
G +LQ ++ L
Sbjct: 170 MGFMPDLQRVLRRL 183
Score = 37 (18.1 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 391 LQRKKRQTLVFSATIALSADFRKKLK 416
LQR R+ T+ SA F K+K
Sbjct: 176 LQRVLRRLSPLRQTLFFSATFDSKIK 201
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 296 (109.3 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 75/194 (38%), Positives = 112/194 (57%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++L L L+ ++ LG PTPIQ+ IP QGK D++ A+TG+GKT AFGLP++
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVL-QGK-DVLAGAQTGTGKTAAFGLPLI 65
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QR +E+ + E +E +RAL++ PTRELA QV D L+ AKG +++
Sbjct: 66 QRFIEQPWQR----EANSKE---------IRALVLVPTRELAQQVLDSLQAYAKGTELKI 112
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GG S + Q L+ ++++ TPGRL L K L L + VLDEADRM++
Sbjct: 113 VAVYGGTSMKVQLNHLRGGVDILIATPGRL--LDHAHVKSLF-LGKVEVLVLDEADRMLD 169
Query: 355 NGHFRELQSIIDML 368
G +LQ ++ L
Sbjct: 170 MGFMPDLQRVLRRL 183
Score = 37 (18.1 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 391 LQRKKRQTLVFSATIALSADFRKKLK 416
LQR R+ T+ SA F K+K
Sbjct: 176 LQRVLRRLSPLRQTLFFSATFDSKIK 201
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 317 (116.6 bits), Expect = 3.9e-27, P = 3.9e-27
Identities = 91/262 (34%), Positives = 137/262 (52%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L L+K+I + +++PTPIQ IP A D+IG AETGSGKT AF LP++
Sbjct: 700 WEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMR--DLIGIAETGSGKTAAFVLPML 757
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K L E + P AL+I P+RELA+Q+ + + A + R
Sbjct: 758 SYV--------KQLPPLTYETSQDGPY----ALVIAPSRELAIQIYEETNKFASYCSCRT 805
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG + E Q L+ E+V+GTPGRL + + EK L+ ++ +LDEADRM++
Sbjct: 806 VAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCL---EKAYTVLNQCNYVILDEADRMMD 862
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD--FR 412
G + I+D +P +N +E + Q + + R R T +FSAT+ S + R
Sbjct: 863 MGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYRLTQMFSATMPPSVERLSR 922
Query: 413 KKLKHGS-LKLKQSVNGLNSIE 433
K L+ + + + G SIE
Sbjct: 923 KYLRAPAYISIGDPGAGKRSIE 944
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 317 (116.6 bits), Expect = 3.9e-27, P = 3.9e-27
Identities = 91/262 (34%), Positives = 137/262 (52%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L L+K+I + +++PTPIQ IP A D+IG AETGSGKT AF LP++
Sbjct: 700 WEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMR--DLIGIAETGSGKTAAFVLPML 757
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K L E + P AL+I P+RELA+Q+ + + A + R
Sbjct: 758 SYV--------KQLPPLTYETSQDGPY----ALVIAPSRELAIQIYEETNKFASYCSCRT 805
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG + E Q L+ E+V+GTPGRL + + EK L+ ++ +LDEADRM++
Sbjct: 806 VAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCL---EKAYTVLNQCNYVILDEADRMMD 862
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD--FR 412
G + I+D +P +N +E + Q + + R R T +FSAT+ S + R
Sbjct: 863 MGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYRLTQMFSATMPPSVERLSR 922
Query: 413 KKLKHGS-LKLKQSVNGLNSIE 433
K L+ + + + G SIE
Sbjct: 923 KYLRAPAYISIGDPGAGKRSIE 944
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 292 (107.8 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 71/198 (35%), Positives = 117/198 (59%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
F ++ L L L+++I G+ EPTP+Q+ IP Q + D++ A+TG+GKT F L
Sbjct: 9 FMSFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVIL-QAR-DVMVTAQTGTGKTAGFTL 66
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P++QRL R + + K +RALI+TPTRELA+QV + ++ K +
Sbjct: 67 PLLQRLFVSRPPLQR------------SAKPVIRALILTPTRELAVQVFECVRAYGKYLP 114
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
++ + GG+S + Q L+ +++V TPGRL +L++ G ++ L + FFVLDEADR
Sbjct: 115 LKATVVHGGVSIKPQINHLRRGVDILVATPGRLLDLVNQG---VLNLSRVEFFVLDEADR 171
Query: 352 MIENGHFRELQSIIDMLP 369
M++ G +++ I+ +LP
Sbjct: 172 MLDMGFLPDIRRILKLLP 189
Score = 40 (19.1 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 388 VSSLQRKKRQTLVFSATIALSA-DFRKKLKH 417
+ L + RQ L+FSAT + + KL H
Sbjct: 184 ILKLLPESRQNLLFSATFSKEIKELTDKLLH 214
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 292 (107.8 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 71/198 (35%), Positives = 117/198 (59%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
F ++ L L L+++I G+ EPTP+Q+ IP Q + D++ A+TG+GKT F L
Sbjct: 9 FMSFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVIL-QAR-DVMVTAQTGTGKTAGFTL 66
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P++QRL R + + K +RALI+TPTRELA+QV + ++ K +
Sbjct: 67 PLLQRLFVSRPPLQR------------SAKPVIRALILTPTRELAVQVFECVRAYGKYLP 114
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
++ + GG+S + Q L+ +++V TPGRL +L++ G ++ L + FFVLDEADR
Sbjct: 115 LKATVVHGGVSIKPQINHLRRGVDILVATPGRLLDLVNQG---VLNLSRVEFFVLDEADR 171
Query: 352 MIENGHFRELQSIIDMLP 369
M++ G +++ I+ +LP
Sbjct: 172 MLDMGFLPDIRRILKLLP 189
Score = 40 (19.1 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 388 VSSLQRKKRQTLVFSATIALSA-DFRKKLKH 417
+ L + RQ L+FSAT + + KL H
Sbjct: 184 ILKLLPESRQNLLFSATFSKEIKELTDKLLH 214
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 72/196 (36%), Positives = 117/196 (59%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L+L ++ +I LG+ +PT IQ+ IP GK DII AA+TG+GKT +F LP+
Sbjct: 2 SFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVL-AGK-DIIAAAQTGTGKTASFVLPL 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+++L + ++ GK L K +RALI+ PTRELA+QV + + AK +++
Sbjct: 60 LEQLNSQYKETGKKLRAK-----------RIRALILVPTRELAVQVEASISQYAKYLDIS 108
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ + GG+ ++Q++ L +++V TPGRL ++ H EL L VLDEADRM+
Sbjct: 109 SMAMYGGVDAQEQKQRLIWGVDILVATPGRLLDMTHQRVLHFDELDML---VLDEADRML 165
Query: 354 ENGHFRELQSIIDMLP 369
+ G ++ II+ LP
Sbjct: 166 DMGFIDDINKIIERLP 181
>TAIR|locus:2032910 [details] [associations]
symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
Length = 491
Score = 189 (71.6 bits), Expect = 5.9e-26, Sum P(3) = 5.9e-26
Identities = 42/104 (40%), Positives = 59/104 (56%)
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
AL++TPTRELA Q+ + K + +N+R IVGGM Q L +RP +V+ TPGR+
Sbjct: 129 ALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIK 188
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
L+ F VLDEADR+++ G EL++I LP
Sbjct: 189 VLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLP 232
Score = 140 (54.3 bits), Expect = 5.9e-26, Sum P(3) = 5.9e-26
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
S+ +T F+ L L +++ LG ++PTP+Q C+P G+ D++G A+TGS
Sbjct: 52 SDTTSATNFEG---LGLAEWAVETCKELGMRKPTPVQTHCVPKIL-AGR-DVLGLAQTGS 106
Query: 224 GKTLAFGLPIMQRLLEE 240
GKT AF LPI+ RL E+
Sbjct: 107 GKTAAFALPILHRLAED 123
Score = 74 (31.1 bits), Expect = 5.9e-26, Sum P(3) = 5.9e-26
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 387 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK--LKQSVNGLNSIETLSER 438
T+ K RQTL+FSAT ++++ + L+H S K ++ GL +++TL+++
Sbjct: 226 TIFQCLPKSRQTLLFSAT--MTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQ 277
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 289 (106.8 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 68/195 (34%), Positives = 113/195 (57%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L L+K++ G++ P+PIQ IPA G+ D++ AA+TG+GKT F LP++
Sbjct: 8 FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVI-SGR-DVMAAAQTGTGKTAGFTLPLL 65
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRL KG + ++RALI+TPTRELA Q+++ ++ K +N+
Sbjct: 66 QRLSSS----------KGNKVSS----NNVRALILTPTRELAAQISESIEVYGKYLNLHS 111
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GG+ Q L+ +++V TPGRL +L + + V+ L F+LDEADRM++
Sbjct: 112 MVVFGGVKINPQIARLRQGVDVLVATPGRLLDLYN---QRAVKFSQLEVFILDEADRMLD 168
Query: 355 NGHFRELQSIIDMLP 369
G R+++ ++ LP
Sbjct: 169 MGFIRDIKKLMTALP 183
Score = 42 (19.8 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 394 KKRQTLVFSATIALSADFRKKLKHGSLK--LKQSVNGLNS 431
K RQ L+FSAT S + R K G + L+ SV+ NS
Sbjct: 184 KDRQNLLFSATF--SPEIRALAK-GMVNNPLEISVDAENS 220
>POMBASE|SPAC31A2.07c [details] [associations]
symbol:dbp10 "ATP-dependent RNA helicase Dbp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC31A2.07c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OrthoDB:EOG4JWZP1
EMBL:AB027882 PIR:S59645 RefSeq:NP_592919.1
ProteinModelPortal:Q09719 STRING:Q09719 EnsemblFungi:SPAC31A2.07c.1
GeneID:2543197 KEGG:spo:SPAC31A2.07c OMA:FYIPYRP NextBio:20804220
Uniprot:Q09719
Length = 848
Score = 216 (81.1 bits), Expect = 5.3e-25, Sum P(3) = 5.3e-25
Identities = 50/117 (42%), Positives = 70/117 (59%)
Query: 253 EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKA 312
E + + RALI++P RELALQ +K+ +KG ++R V IVGG+S E+Q LL
Sbjct: 129 EHLKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSG 188
Query: 313 RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+P++VV TPGR L E L EL ++ + V DEADR+ E G +L I+ LP
Sbjct: 189 KPDIVVATPGRFLHLKV--EMKL-ELSSIEYVVFDEADRLFEMGFAAQLTEILHALP 242
Score = 139 (54.0 bits), Expect = 5.3e-25, Sum P(3) = 5.3e-25
Identities = 27/63 (42%), Positives = 44/63 (69%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L+ L+++I++ GFK PTPIQ+ IP +G+ D++G A TGSGKT AF +P++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLL-EGR-DVVGMARTGSGKTAAFVIPMI 128
Query: 235 QRL 237
+ L
Sbjct: 129 EHL 131
Score = 46 (21.3 bits), Expect = 5.3e-25, Sum P(3) = 5.3e-25
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 396 RQTLVFSATIALS-ADFRK 413
RQTL+FSAT+ + DF K
Sbjct: 245 RQTLLFSATLPRTLVDFAK 263
>UNIPROTKB|F8VRX4 [details] [associations]
symbol:DDX54 "ATP-dependent RNA helicase DDX54"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC089999 HGNC:HGNC:20084 ChiTaRS:DDX54 IPI:IPI01022245
ProteinModelPortal:F8VRX4 SMR:F8VRX4 Ensembl:ENST00000552375
ArrayExpress:F8VRX4 Bgee:F8VRX4 Uniprot:F8VRX4
Length = 208
Score = 187 (70.9 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
Identities = 45/117 (38%), Positives = 66/117 (56%)
Query: 253 EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKA 312
E + ++ + RALI++PTRELALQ KE+ K ++ I+GG E Q L
Sbjct: 73 ERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHE 132
Query: 313 RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
P++++ TPGRL + E L +L ++ + V DEADR+ E G +LQ II LP
Sbjct: 133 NPDIIIATPGRLVHVAV--EMSL-KLQSVEYVVFDEADRLFEMGFAEQLQEIIARLP 186
Score = 123 (48.4 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
Identities = 27/62 (43%), Positives = 36/62 (58%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
+ K I + G+K PTPIQ+ IP GK D++ A TGSGKT F LP+ +RL +
Sbjct: 24 VFKGIMKKGYKVPTPIQRKTIPVIL-DGK-DVVAMARTGSGKTACFLLPMFERLKTHSAQ 81
Query: 244 AG 245
G
Sbjct: 82 TG 83
>TAIR|locus:2130918 [details] [associations]
symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
GermOnline:AT4G16630 Uniprot:Q9ZRZ8
Length = 789
Score = 198 (74.8 bits), Expect = 8.9e-25, Sum P(2) = 8.9e-25
Identities = 39/105 (37%), Positives = 69/105 (65%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R LI+TPTRELA+Q+ ++ +A+ +++ IVGG+S +QE +L++ P++VV TPGR+
Sbjct: 240 RVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRM 299
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ + V+L L+ +LDEADR+++ G E+ ++ + P
Sbjct: 300 IDHLRNSMS--VDLDDLAVLILDEADRLLQTGFATEITELVRLCP 342
Score = 162 (62.1 bits), Expect = 8.9e-25, Sum P(2) = 8.9e-25
Identities = 40/95 (42%), Positives = 56/95 (58%)
Query: 146 EESVTVSNGPDDAEEE-LVSEAE-ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
E+ P+DA + S + +S D + EL L L+++ LG+K+PTPIQ AC
Sbjct: 138 EDDEAAEYKPEDATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAAC 197
Query: 204 IPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLL 238
IP A G+ D+ +A TGSGKT AF LP ++RLL
Sbjct: 198 IPLAL-TGR-DLCASAITGSGKTAAFALPTLERLL 230
Score = 63 (27.2 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 328 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI-IDMLPMTNGSNEGQSEQTQTCV 386
+S E+ +V L ++ V+ RMI+ H R S+ +D L + + QT
Sbjct: 276 LSVREQEVV-LRSMPDIVVATPGRMID--HLRNSMSVDLDDLAVLILDEADRLLQTGFAT 332
Query: 387 TVSSLQR---KKRQTLVFSATI 405
++ L R K+RQT++FSAT+
Sbjct: 333 EITELVRLCPKRRQTMLFSATM 354
Score = 42 (19.8 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEF 172
EE S+ D +EE +SE + + E+
Sbjct: 119 EEEEDASDAETDKQEEYLSEDDEAAEY 145
Score = 42 (19.8 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 21/95 (22%), Positives = 41/95 (43%)
Query: 303 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 362
TEK+++L+ + G P EL+S +++ E ++ + R+L+
Sbjct: 603 TEKEKKLVAQAEKDSAGNPAG-GELVSADRAEDLKMKEKR---KREREKNLPRKKRRKLE 658
Query: 363 SIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 397
+ +ML G E + E+ S + KK+Q
Sbjct: 659 AAREMLEDNEGEEEEEDEEGDEKRGRSRGKDKKKQ 693
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 192 (72.6 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 51/159 (32%), Positives = 85/159 (53%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
+R LI+ PTRELALQ ++ +A+ N+ IVGG+S + QE L+ P++V+ TPGR
Sbjct: 262 IRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGR 321
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS---NEGQSE 380
L + + H + L L +LDEADR+++ G E+ I++ P + + ++
Sbjct: 322 LIDHLLNA--HGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTMLFSATLND 379
Query: 381 QTQTCVTVSSLQRKKRQT-LVFSATIALSADFRK-KLKH 417
+ +T +S Q + Q + T L +F K K +H
Sbjct: 380 EVKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVKIKPQH 418
Score = 165 (63.1 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 35/71 (49%), Positives = 48/71 (67%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
+ E + EL L L+K++ +LGF +PTPIQ IP A + GK DI+ +A TGSGKT
Sbjct: 185 VEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALN-GK-DILASASTGSGKTA 242
Query: 228 AFGLPIMQRLL 238
AF LP+++RLL
Sbjct: 243 AFLLPVLERLL 253
Score = 37 (18.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNE 177
+N DD +EE V+E E E + NE
Sbjct: 124 NNDNDDDDEE-VNEEEEEEEEEEDNE 148
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 206 (77.6 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 44/113 (38%), Positives = 69/113 (61%)
Query: 258 YAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-VRVVPIVGGMSTEKQERLLKARPEL 316
Y P + +I+TPTRELALQV + K+++ +N + + VGG++ +QE LK RP++
Sbjct: 194 YKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDI 253
Query: 317 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
V+ TPGRL + + V+ + V+DEADRM+E G EL I+ ++P
Sbjct: 254 VIATPGRLIDHIRNSPSFSVQ--DIQVLVIDEADRMLEEGFQDELTEILSLIP 304
Score = 146 (56.5 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 38/97 (39%), Positives = 58/97 (59%)
Query: 155 PDDAEEELVSEAEISTE---FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
P+D+ E + E S+ ++ L+L ++K I L F +PTPIQ A IP A G
Sbjct: 109 PEDSAEAIADFYEESSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIAL-LG 167
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKML 248
K DI+ A+TGSGKT A+ +PI++RLL + + K++
Sbjct: 168 K-DIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVI 203
Score = 53 (23.7 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 376 EG-QSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EG Q E T+ +S + + KRQTL+FSAT+
Sbjct: 290 EGFQDELTEI---LSLIPKHKRQTLLFSATM 317
Score = 38 (18.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLL 310
L ++ KG++ RVV V T + R++
Sbjct: 365 LYQLLKGVSSRVVVFVARKETAHRLRIV 392
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 206 (77.6 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 44/113 (38%), Positives = 69/113 (61%)
Query: 258 YAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-VRVVPIVGGMSTEKQERLLKARPEL 316
Y P + +I+TPTRELALQV + K+++ +N + + VGG++ +QE LK RP++
Sbjct: 194 YKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDI 253
Query: 317 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
V+ TPGRL + + V+ + V+DEADRM+E G EL I+ ++P
Sbjct: 254 VIATPGRLIDHIRNSPSFSVQ--DIQVLVIDEADRMLEEGFQDELTEILSLIP 304
Score = 146 (56.5 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 38/97 (39%), Positives = 58/97 (59%)
Query: 155 PDDAEEELVSEAEISTE---FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
P+D+ E + E S+ ++ L+L ++K I L F +PTPIQ A IP A G
Sbjct: 109 PEDSAEAIADFYEESSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIAL-LG 167
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKML 248
K DI+ A+TGSGKT A+ +PI++RLL + + K++
Sbjct: 168 K-DIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVI 203
Score = 53 (23.7 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 376 EG-QSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EG Q E T+ +S + + KRQTL+FSAT+
Sbjct: 290 EGFQDELTEI---LSLIPKHKRQTLLFSATM 317
Score = 38 (18.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLL 310
L ++ KG++ RVV V T + R++
Sbjct: 365 LYQLLKGVSSRVVVFVARKETAHRLRIV 392
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 293 (108.2 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 79/231 (34%), Positives = 125/231 (54%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L ++K + ++ +KEP+ IQ+A IP Q K D+IG AETGSGKT AF +P++
Sbjct: 251 WEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLL-QRK-DLIGIAETGSGKTAAFIIPLI 308
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K L E YA +++ PTRELA Q+ + A+ + R
Sbjct: 309 IAI----SKLPP-LTESNMHLGPYA-------VVLAPTRELAQQIQVEGNKFAEPLGFRC 356
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG + E+Q + +VV TPGRL + + E+ L L ++ V+DEADRM++
Sbjct: 357 VSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCL---ERRLFVLSQCTYVVMDEADRMLD 413
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++ I+ LP +N S E+ + + ++ +RQT++FSAT+
Sbjct: 414 MGFEDDVNKILSSLPSSNAS-----EKDGSILATANSSSSRRQTIMFSATL 459
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 174 (66.3 bits), Expect = 4.7e-24, Sum P(3) = 4.7e-24
Identities = 36/104 (34%), Positives = 59/104 (56%)
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
AL++TPTRELA Q+ + + + GI ++ +VGGM Q L +P +++ TPGRL
Sbjct: 132 ALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLV 191
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ + + L + + V+DEADR++ EL I+ +LP
Sbjct: 192 DHLENMKGF--NLKAIKYLVMDEADRILNMDFEVELDKILKVLP 233
Score = 159 (61.0 bits), Expect = 4.7e-24, Sum P(3) = 4.7e-24
Identities = 40/99 (40%), Positives = 59/99 (59%)
Query: 147 ESVTVSNGPDD--AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACI 204
+S +G DD +E++ E +++ W +L L+ L ++ L +K P+ IQ+ I
Sbjct: 38 DSEAALSGEDDKGSEDDAAEEQKLT-----WKDLGLNEALCQACDELKWKAPSKIQREAI 92
Query: 205 PAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
P A QGK D+IG AETGSGKT AF LPI+ LLE ++
Sbjct: 93 PVAL-QGK-DVIGLAETGSGKTGAFALPILHALLENPQR 129
Score = 55 (24.4 bits), Expect = 4.7e-24, Sum P(3) = 4.7e-24
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 394 KKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSE 437
++R+T +FSAT+ KKL+ SLK V N +T+ +
Sbjct: 234 RERRTFLFSATMTKKV---KKLQRASLKDPVKVEVSNKYQTVEQ 274
>FB|FBgn0010220 [details] [associations]
symbol:Dbp45A "DEAD box protein 45A" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS;NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE013599
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
GeneTree:ENSGT00670000098028 EMBL:L13612 EMBL:Z23266 EMBL:AY058728
PIR:S38329 RefSeq:NP_476927.1 UniGene:Dm.4231
ProteinModelPortal:Q07886 SMR:Q07886 PaxDb:Q07886
EnsemblMetazoa:FBtr0088564 GeneID:35917 KEGG:dme:Dmel_CG12759
CTD:35917 FlyBase:FBgn0010220 InParanoid:Q07886 OMA:CQLLSMT
OrthoDB:EOG431ZDJ PhylomeDB:Q07886 GenomeRNAi:35917 NextBio:795815
Bgee:Q07886 GermOnline:CG12759 Uniprot:Q07886
Length = 521
Score = 180 (68.4 bits), Expect = 5.5e-24, Sum P(3) = 5.5e-24
Identities = 48/126 (38%), Positives = 69/126 (54%)
Query: 247 MLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ 306
+LE EE P H AL++TPT ELA Q+++ + + VRV + GG +
Sbjct: 65 ILERLSEE-----PVSHF-ALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVE 118
Query: 307 ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+ L RP +VV PGRL + ++G + + L + V+DEADRM+ NG F E SII+
Sbjct: 119 SQKLMQRPHIVVAMPGRLADHLTGCDTFSFD--NLKYLVVDEADRML-NGDFDESLSIIE 175
Query: 367 M-LPMT 371
LP T
Sbjct: 176 RCLPKT 181
Score = 168 (64.2 bits), Expect = 5.5e-24, Sum P(3) = 5.5e-24
Identities = 38/70 (54%), Positives = 48/70 (68%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E + + L L P L+K + +LG K TPIQ+ CIPA G+ D IGAA+TGSGKT AF
Sbjct: 5 EANPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAIL-AGQ-DCIGAAKTGSGKTFAFA 62
Query: 231 LPIMQRLLEE 240
LPI++RL EE
Sbjct: 63 LPILERLSEE 72
Score = 39 (18.8 bits), Expect = 5.5e-24, Sum P(3) = 5.5e-24
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 394 KKRQTLVFSATIALSADFRKK-----LKHGSLKLKQSVNGLNSIETLSERAGMRANVAIV 448
K RQ L FSAT+ DF K+ + + Q + + ++ETL +R + A+
Sbjct: 180 KTRQNLFFSATMK---DFIKESSIFPIASDCFEWSQD-SDVATVETLDQRYLLCADYDR- 234
Query: 449 DLTNVSVLANKLEES 463
D+ + L EE+
Sbjct: 235 DMVLIEALRKYREEN 249
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 272 (100.8 bits), Expect = 6.3e-24, Sum P(2) = 6.3e-24
Identities = 72/197 (36%), Positives = 106/197 (53%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L L+ + L + +PTPIQ IP+ G+ D+I A TGSGKT F LP++
Sbjct: 10 FTELGLITPLLARLAELEYHQPTPIQARAIPSV-FAGR-DLIAGANTGSGKTATFALPML 67
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN--V 292
Q+L E+ K KG + L++ PTRELA QV D +K A N +
Sbjct: 68 QKLREDISSGSK--NSKGN---------FVTGLVLVPTRELAKQVADSIKSYAVHFNGEI 116
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
+ + + GG+S Q L+ +++V TPGRL +L+S L ++ TL VLDEADRM
Sbjct: 117 KTLAVFGGVSVNIQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTL---VLDEADRM 173
Query: 353 IENGHFRELQSIIDMLP 369
+ G EL +++ + P
Sbjct: 174 LSLGFTEELTALLALTP 190
Score = 52 (23.4 bits), Expect = 6.3e-24, Sum P(2) = 6.3e-24
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 382 TQTCVTVSSLQRKKRQTLVFSAT 404
T+ + +L KK+QTL+FSAT
Sbjct: 179 TEELTALLALTPKKKQTLLFSAT 201
>TAIR|locus:2010306 [details] [associations]
symbol:EMB1586 "embryo defective 1586" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009663 "plasmodesma organization"
evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0010497
"plasmodesmata-mediated intercellular transport" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0003723
EMBL:AC012187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0010497 EMBL:AC025417 EMBL:AY062618 EMBL:AY114691
EMBL:AK175587 EMBL:AK175711 EMBL:AK175751 EMBL:AK175793
EMBL:AK176044 EMBL:AK176194 EMBL:AK226229 EMBL:AK229878
EMBL:AK230085 IPI:IPI00521991 PIR:H86260 RefSeq:NP_172737.2
UniGene:At.47876 ProteinModelPortal:Q8W4E1 SMR:Q8W4E1 PaxDb:Q8W4E1
PRIDE:Q8W4E1 EnsemblPlants:AT1G12770.1 GeneID:837833
KEGG:ath:AT1G12770 GeneFarm:1026 TAIR:At1g12770
HOGENOM:HOG000239285 InParanoid:Q8W4E1 OMA:IRVSNFV PhylomeDB:Q8W4E1
ProtClustDB:CLSN2681499 Genevestigator:Q8W4E1 GO:GO:0009663
Uniprot:Q8W4E1
Length = 551
Score = 288 (106.4 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 93/282 (32%), Positives = 151/282 (53%)
Query: 166 AEI-STEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
AEI S F A + EL L L+ S+ R GF PT +Q A +PA +G D + + TG
Sbjct: 100 AEIVSPLFSAKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAII-KGH-DAVIQSYTG 157
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 282
SGKTLA+ LPI+ + EK+ E + E ++A+I+ P+REL +Q+
Sbjct: 158 SGKTLAYLLPILSEIGPLAEKSRSSHSENDKRTE-------IQAMIVAPSRELGMQIVRE 210
Query: 283 LKEVAKGINVRVVP-IVGGMSTEKQERLLKA-RPELVVGTPGRLWELMSGGEKHLVELHT 340
++++ ++ R+V +VGG + +QE LK +P +VVGTPGR+ E+ GG+ H H
Sbjct: 211 VEKLLGPVHRRMVQQLVGGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHT---HG 267
Query: 341 LSFFVLDEADRMIENGHFRE-LQSIIDMLPMTNGSN-EGQSEQTQTCVTVSSLQRKKRQT 398
F VLDE D ++ + +FRE + I++ + +G+ +G+ ++ R RQT
Sbjct: 268 CRFLVLDEVDELL-SFNFREDIHRILEHVGKRSGAGPKGEVDE-----------RANRQT 315
Query: 399 LVFSATIALSA-DFRKKLKHGSLKLKQSVNGLNSIETLSERA 439
++ SAT+ S K H + L Q+ N + ++T+ A
Sbjct: 316 ILVSATVPFSVIRAAKSWSHEPV-LVQA-NKVTPLDTVQPSA 355
>CGD|CAL0004058 [details] [associations]
symbol:DBP8 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004058 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AACQ01000165 EMBL:AACQ01000186
RefSeq:XP_711718.1 RefSeq:XP_712192.1 ProteinModelPortal:Q59PR3
STRING:Q59PR3 GeneID:3646191 GeneID:3646692 KEGG:cal:CaO19.13973
KEGG:cal:CaO19.6652 KO:K14778 Uniprot:Q59PR3
Length = 440
Score = 210 (79.0 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 41/107 (38%), Positives = 67/107 (62%)
Query: 267 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 326
LI+TPTRELALQ+ + + +N++V +VGG +Q L+ +P V+ TPGRL +
Sbjct: 73 LILTPTRELALQIAEQFAALGANMNIKVAVVVGGEDFVQQTLALQRKPHFVIATPGRLAD 132
Query: 327 -LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 372
+++ GE+ + L + + VLDEADR++ N +LQ D+LP ++
Sbjct: 133 HILNSGEETISGLRRVKYLVLDEADRLLSNSFGSDLQRCFDVLPTSD 179
Score = 120 (47.3 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++N+L + L +S+ + PT IQ ACIPA +G D IG A+TGSGKT+AF P+
Sbjct: 2 SFNDLGVAKWLSESLDAMKIYTPTAIQSACIPAIL-KGH-DCIGGAKTGSGKTIAFAAPM 59
Query: 234 MQRLLEE 240
+ + E+
Sbjct: 60 LTQWSED 66
Score = 47 (21.6 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 374 SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
SN S+ Q C V KRQTL+F+ATI
Sbjct: 161 SNSFGSD-LQRCFDVLPTS-DKRQTLLFTATI 190
Score = 40 (19.1 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 410 DFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAI--VDLTNVSVLAN 458
DFR H + + N L+ + + R + +VA +D+ V ++ N
Sbjct: 277 DFRVASLHSEMPQSERTNSLHRFKAGAARILIATDVASRGLDIPTVELVIN 327
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 178 (67.7 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 51/177 (28%), Positives = 82/177 (46%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L L++TPTRELA Q+ + + I V+ IVGG+ Q +L +P +V+ TPGR
Sbjct: 148 LHTLVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQALVLAKKPHVVIATPGR 207
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
L + M + L L + V+DEADR++ E+ I+ ++P + + T+
Sbjct: 208 LIDHMENTKGF--NLRALKYLVMDEADRILNMDFESEVDKILKVIPRDRRTFLFSATMTK 265
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAG 440
V LQR Q V + + A KL+ + + + L+E AG
Sbjct: 266 K---VQKLQRAALQDPVKCSVSSKYATV-DKLQQFYIFIPSKYKDCYLVSILNELAG 318
Score = 164 (62.8 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 42/93 (45%), Positives = 59/93 (63%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
EE+ T ++ + EE V+ EI T F EL + +L ++ +LG+K+PT IQ IP
Sbjct: 55 EETNTHTHTEETLIEETVTTGEIHTSF---KELGVTEVLCEACDQLGWKKPTKIQIEAIP 111
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLL 238
A QG+ D+IG AETGSGKT AF +P++Q LL
Sbjct: 112 VAL-QGR-DVIGLAETGSGKTGAFAVPVLQSLL 142
Score = 39 (18.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAI--VDLTNVSVLAN 458
HG + + + LN ++ S + +VA +D+ +V + N
Sbjct: 349 HGQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVIN 392
>ASPGD|ASPL0000062195 [details] [associations]
symbol:AN10125 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:RIRKRDH EnsemblFungi:CADANIAT00001822 Uniprot:C8VQD7
Length = 814
Score = 195 (73.7 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 42/105 (40%), Positives = 62/105 (59%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R I+ PTRELA+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR
Sbjct: 371 RVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENVLKKRPDVIIATPGRF 430
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ M V+ TL VLDEADRM+E+G EL I+ +P
Sbjct: 431 IDHMRNSASFTVD--TLEILVLDEADRMLEDGFADELNEILTTIP 473
Score = 143 (55.4 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGA 218
EE+ +A ++ ++ E L +++ + + F PTPIQ+ IP A GK DI+G+
Sbjct: 284 EEKTDEDAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVAL-LGK-DIVGS 341
Query: 219 AETGSGKTLAFGLPIMQRLL 238
A TGSGKT AF +PI++RLL
Sbjct: 342 AVTGSGKTAAFVVPILERLL 361
Score = 49 (22.3 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 394 KKRQTLVFSATIALSAD 410
K RQT++FSAT+ S D
Sbjct: 474 KSRQTMLFSATMTDSVD 490
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 181 (68.8 bits), Expect = 2.8e-23, Sum P(5) = 2.8e-23
Identities = 40/105 (38%), Positives = 68/105 (64%)
Query: 261 KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGT 320
K ++ L+I+PTRELA Q+ D+L + + ++ + GG+ ++Q LK + ++VV T
Sbjct: 180 KRGIQVLVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLK-KSQVVVAT 238
Query: 321 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 365
PGRL +L+ G V+L +++ VLDEADRM+E G ++++II
Sbjct: 239 PGRLLDLLQEGS---VDLSQVNYLVLDEADRMLEKGFEEDIKNII 280
Score = 138 (53.6 bits), Expect = 2.8e-23, Sum P(5) = 2.8e-23
Identities = 40/108 (37%), Positives = 57/108 (52%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLG---------FKEPT 197
+S +++ P +E E EI+ E D+ +L L PLL L F +PT
Sbjct: 79 QSEALTSLPQSDIDEYFKENEIAVE-DSL-DLALRPLLSFDYLSLDSSIQAEISKFPKPT 136
Query: 198 PIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 245
PIQ P GK D++G AETGSGKT AFG+P + L+ +++K G
Sbjct: 137 PIQAVAWPYLL-SGK-DVVGVAETGSGKTFAFGVPAISHLMNDQKKRG 182
Score = 46 (21.3 bits), Expect = 2.8e-23, Sum P(5) = 2.8e-23
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAI--VDLTNVSVLAN 458
HG L +Q LN ++ + +VA +D+ NV + N
Sbjct: 390 HGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVIN 433
Score = 41 (19.5 bits), Expect = 2.8e-23, Sum P(5) = 2.8e-23
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 395 KRQTLVFSAT 404
KRQTL+F+AT
Sbjct: 287 KRQTLMFTAT 296
Score = 40 (19.1 bits), Expect = 2.8e-23, Sum P(5) = 2.8e-23
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 11 EHSKETKPNRRKRTRKSREAEK 32
+H K+ K + K+ +K ++ +K
Sbjct: 26 KHKKDKKDKKEKKDKKHKKHKK 47
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 195 (73.7 bits), Expect = 3.1e-23, Sum P(3) = 3.1e-23
Identities = 45/114 (39%), Positives = 65/114 (57%)
Query: 258 YAPKG--HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPE 315
Y PK R LI+ PTRELA+Q ++A ++ V +GG+S + QE+ L+ RP+
Sbjct: 323 YRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRKRPD 382
Query: 316 LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+V+ TPGR + M + VE + V+DEADRM+E+G EL II P
Sbjct: 383 IVIATPGRFIDHMRNSQGFTVE--NIEIMVMDEADRMLEDGFADELNEIIQACP 434
Score = 145 (56.1 bits), Expect = 3.1e-23, Sum P(3) = 3.1e-23
Identities = 43/101 (42%), Positives = 57/101 (56%)
Query: 146 EESVTVSNG---PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
EE + N D E+ +++ S F + N R P+L K + LGF+ PT IQ
Sbjct: 234 EEEIAKKNAFFAEGDKEKSMMTTTHSS--FQSMNLSR--PIL-KGLSNLGFEVPTQIQDK 288
Query: 203 CIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
IP A GK DI+GAA TGSGKT AF +PI++RLL +K
Sbjct: 289 TIPLAL-LGK-DIVGAAVTGSGKTAAFIVPILERLLYRPKK 327
Score = 45 (20.9 bits), Expect = 3.1e-23, Sum P(3) = 3.1e-23
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 394 KKRQTLVFSATIALSAD 410
K RQT++FSAT+ D
Sbjct: 435 KSRQTMLFSATMTDKVD 451
>GENEDB_PFALCIPARUM|PF14_0429 [details] [associations]
symbol:PF14_0429 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HSSP:P10081 RefSeq:XP_001348603.1
ProteinModelPortal:Q8IL21 PRIDE:Q8IL21
EnsemblProtists:PF14_0429:mRNA GeneID:812011 KEGG:pfa:PF14_0429
EuPathDB:PlasmoDB:PF3D7_1445200 HOGENOM:HOG000282109
ProtClustDB:CLSZ2431945 Uniprot:Q8IL21
Length = 796
Score = 288 (106.4 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 90/289 (31%), Positives = 145/289 (50%)
Query: 159 EEELVSEAEISTEFDA--WNE----LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
EEEL + I + WN LH + MKS++ F +PT IQ + + + K
Sbjct: 217 EEELEKDNNIKYKIHCNNWNNGGKIFILHSV-MKSLFDNAFFKPTEIQSKTLEKSIND-K 274
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
DI+ ++TG+GKTL F LPI+ +L + K K +K + +K+ R LI+ PT
Sbjct: 275 NDIVVISKTGTGKTLTFCLPILNNILINKLKEYK---KKLKNIQKF------RCLILVPT 325
Query: 273 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL-WEL-MSG 330
RELALQ+ H + K IN+ + I+GG++ KQ+R+L +PE+++ TPGRL + L +
Sbjct: 326 RELALQILKHFNYINKYINLFISTIIGGLNLNKQKRILMKKPEILICTPGRLKYFLHLEN 385
Query: 331 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT-QTCVTVS 389
K++ ++ + + V DE D+MIE +++ I + + G + + QT T+S
Sbjct: 386 PIKYIYQMKNIRYLVCDEIDKMIEISFMKDISYIAKHIYKSVGDKKKKLIQTFLLSATLS 445
Query: 390 ---SLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETL 435
LQ L+ S I F L + + N L + TL
Sbjct: 446 LTVQLQNDNMTKLLNSIIIRKDKSFIINLSNEQNVYNDNSNILPELLTL 494
Score = 37 (18.1 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 19 NRRKRTRKSREAEKLNSLKWNSSFSAADN 47
N+ K K+ E++K SLK + +N
Sbjct: 55 NKCKNVSKNNESKKKLSLKRKKDSTKREN 83
>UNIPROTKB|Q8IL21 [details] [associations]
symbol:PF14_0429 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HSSP:P10081 RefSeq:XP_001348603.1
ProteinModelPortal:Q8IL21 PRIDE:Q8IL21
EnsemblProtists:PF14_0429:mRNA GeneID:812011 KEGG:pfa:PF14_0429
EuPathDB:PlasmoDB:PF3D7_1445200 HOGENOM:HOG000282109
ProtClustDB:CLSZ2431945 Uniprot:Q8IL21
Length = 796
Score = 288 (106.4 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 90/289 (31%), Positives = 145/289 (50%)
Query: 159 EEELVSEAEISTEFDA--WNE----LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
EEEL + I + WN LH + MKS++ F +PT IQ + + + K
Sbjct: 217 EEELEKDNNIKYKIHCNNWNNGGKIFILHSV-MKSLFDNAFFKPTEIQSKTLEKSIND-K 274
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
DI+ ++TG+GKTL F LPI+ +L + K K +K + +K+ R LI+ PT
Sbjct: 275 NDIVVISKTGTGKTLTFCLPILNNILINKLKEYK---KKLKNIQKF------RCLILVPT 325
Query: 273 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL-WEL-MSG 330
RELALQ+ H + K IN+ + I+GG++ KQ+R+L +PE+++ TPGRL + L +
Sbjct: 326 RELALQILKHFNYINKYINLFISTIIGGLNLNKQKRILMKKPEILICTPGRLKYFLHLEN 385
Query: 331 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT-QTCVTVS 389
K++ ++ + + V DE D+MIE +++ I + + G + + QT T+S
Sbjct: 386 PIKYIYQMKNIRYLVCDEIDKMIEISFMKDISYIAKHIYKSVGDKKKKLIQTFLLSATLS 445
Query: 390 ---SLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETL 435
LQ L+ S I F L + + N L + TL
Sbjct: 446 LTVQLQNDNMTKLLNSIIIRKDKSFIINLSNEQNVYNDNSNILPELLTL 494
Score = 37 (18.1 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 19 NRRKRTRKSREAEKLNSLKWNSSFSAADN 47
N+ K K+ E++K SLK + +N
Sbjct: 55 NKCKNVSKNNESKKKLSLKRKKDSTKREN 83
>UNIPROTKB|F1NA53 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
IPI:IPI00684751 ProteinModelPortal:F1NA53
Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
Length = 402
Score = 171 (65.3 bits), Expect = 4.6e-23, Sum P(3) = 4.6e-23
Identities = 40/113 (35%), Positives = 65/113 (57%)
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
P G + L++TPTRELA Q+ + + + K + ++ +VGG+ Q L +P +V+
Sbjct: 68 PYG-IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRKPHVVIA 126
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG--HFR-ELQSIIDMLP 369
TPGRL + + + L L F VLDEADR++E G F +L+ I++ +P
Sbjct: 127 TPGRLADHLRSS--NTFSLKKLKFLVLDEADRLLEQGCADFTADLEVILEAVP 177
Score = 152 (58.6 bits), Expect = 4.6e-23, Sum P(3) = 4.6e-23
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
A+ EL L P L++ ++G PTP+Q +CIP QG+ D +G A+TGSGKT AF LP+
Sbjct: 3 AFRELGLAPWLVEQARQMGLSRPTPVQASCIPPIL-QGR-DCLGCAKTGSGKTAAFVLPV 60
Query: 234 MQRLLEE 240
+Q L E+
Sbjct: 61 LQVLSED 67
Score = 50 (22.7 bits), Expect = 4.6e-23, Sum P(3) = 4.6e-23
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 395 KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSER 438
+RQTL+FSAT+ + + K L ++ + + +++ L +R
Sbjct: 179 RRQTLLFSATLTDTLNELKSLAMNRPFFWEAASEVRTVDELDQR 222
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 288 (106.4 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 80/231 (34%), Positives = 127/231 (54%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L ++++I +LG+++P+PIQ IP + G+ DI+G AETGSGKT AF +P++
Sbjct: 415 WQESNLPREILEAIRQLGYEKPSPIQMQSIPISL-TGR-DILGIAETGSGKTCAFVIPML 472
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K ++ K EA+ P AL++ PTREL Q+ + A+ RV
Sbjct: 473 IYI----SKQPRLT--KDTEAD--GPY----ALVMAPTRELVQQIEKETRNFAQHFGFRV 520
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG S E Q + E+++ TPGRL + + EK + L+ ++ VLDEAD MI+
Sbjct: 521 VSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCL---EKRYLVLNQCNYIVLDEADMMID 577
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++ S++D +P + +E E + S R T++FSAT+
Sbjct: 578 LGFEPQVTSVLDAMPSSFLKSE-DDEMAEK--QESDRSHIYRTTILFSATM 625
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 288 (106.4 bits), Expect = 5.9e-23, P = 5.9e-23
Identities = 81/252 (32%), Positives = 134/252 (53%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
A I T FD L L+ LL+ +I ++ + + TPIQK + ++ D+IG A+TGSGK
Sbjct: 357 AAIET-FDD-PSLNLNELLLSNIKKVNYDKTTPIQKYSLNIIMNRN--DLIGVAQTGSGK 412
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLR-ALIITPTRELALQVTDHLK 284
T + LPI+ +L E+ + + Y + L LI+ PTRELA+Q+ K
Sbjct: 413 TAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAK 472
Query: 285 EVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
+ ++ V + GG + + Q L +++V TPGRL +++ EK ++L +F
Sbjct: 473 KFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLNDIL---EKGKIKLFLTTFL 529
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
VLDEADRM++ G +++SI++ M N+ + + + KRQT++FSAT
Sbjct: 530 VLDEADRMLDMGFSPQIRSIVNDYDMPGNDNDVHTSENKVEYKKYCNDIIKRQTIMFSAT 589
Query: 405 IALSADFRKKLK 416
FRK+++
Sbjct: 590 ------FRKEIQ 595
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 288 (106.4 bits), Expect = 5.9e-23, P = 5.9e-23
Identities = 81/252 (32%), Positives = 134/252 (53%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
A I T FD L L+ LL+ +I ++ + + TPIQK + ++ D+IG A+TGSGK
Sbjct: 357 AAIET-FDD-PSLNLNELLLSNIKKVNYDKTTPIQKYSLNIIMNRN--DLIGVAQTGSGK 412
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLR-ALIITPTRELALQVTDHLK 284
T + LPI+ +L E+ + + Y + L LI+ PTRELA+Q+ K
Sbjct: 413 TAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAK 472
Query: 285 EVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
+ ++ V + GG + + Q L +++V TPGRL +++ EK ++L +F
Sbjct: 473 KFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLNDIL---EKGKIKLFLTTFL 529
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
VLDEADRM++ G +++SI++ M N+ + + + KRQT++FSAT
Sbjct: 530 VLDEADRMLDMGFSPQIRSIVNDYDMPGNDNDVHTSENKVEYKKYCNDIIKRQTIMFSAT 589
Query: 405 IALSADFRKKLK 416
FRK+++
Sbjct: 590 ------FRKEIQ 595
>UNIPROTKB|Q8EHT1 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 281 (104.0 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 74/198 (37%), Positives = 117/198 (59%)
Query: 177 ELRLHPLLMKSI-YRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQ 235
EL L+ L K++ RL K PT +Q+ IPA G+ D++ ++TGSGKT AFGLP++Q
Sbjct: 21 ELGLNAALRKALPTRL--KHPTRVQQLAIPAIL-AGR-DLLALSQTGSGKTFAFGLPLLQ 76
Query: 236 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN---- 291
L ++ + K P AL++ PTRELALQV++ L +A ++
Sbjct: 77 ILWQQIAV---------QTTAKSVPAAKPLALVLVPTRELALQVSEALHALASQLSTSAP 127
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ + + GG++ E+Q L A+P+LVV TPGRL +L + + H + L + VLDEADR
Sbjct: 128 LNIQLLCGGVALEQQLADLSAKPQLVVATPGRLLDLCT--QSH-ISLDAIKHLVLDEADR 184
Query: 352 MIENGHFRELQSIIDMLP 369
++E G + ++Q ++ M+P
Sbjct: 185 LLEMGFWPDMQKLMAMMP 202
>TIGR_CMR|SO_1136 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 281 (104.0 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 74/198 (37%), Positives = 117/198 (59%)
Query: 177 ELRLHPLLMKSI-YRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQ 235
EL L+ L K++ RL K PT +Q+ IPA G+ D++ ++TGSGKT AFGLP++Q
Sbjct: 21 ELGLNAALRKALPTRL--KHPTRVQQLAIPAIL-AGR-DLLALSQTGSGKTFAFGLPLLQ 76
Query: 236 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN---- 291
L ++ + K P AL++ PTRELALQV++ L +A ++
Sbjct: 77 ILWQQIAV---------QTTAKSVPAAKPLALVLVPTRELALQVSEALHALASQLSTSAP 127
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ + + GG++ E+Q L A+P+LVV TPGRL +L + + H + L + VLDEADR
Sbjct: 128 LNIQLLCGGVALEQQLADLSAKPQLVVATPGRLLDLCT--QSH-ISLDAIKHLVLDEADR 184
Query: 352 MIENGHFRELQSIIDMLP 369
++E G + ++Q ++ M+P
Sbjct: 185 LLEMGFWPDMQKLMAMMP 202
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 176 (67.0 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 55/187 (29%), Positives = 88/187 (47%)
Query: 259 APKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVV 318
AP+ L L++ PTRELA Q++ + + I VR IVGGM Q L +P ++V
Sbjct: 111 APQT-LFGLVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVAQSIALGKKPHIIV 169
Query: 319 GTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQ 378
TPGRL + + + L L + +DEADR+++ L II +LP T +
Sbjct: 170 ATPGRLLDHLENTKGF--SLRNLKYLAIDEADRLLDMDFGESLDKIIRILPRTRHTYLFS 227
Query: 379 SEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR--KKLKHGSLKLKQSVNGLNSIETLS 436
+ + V SLQR V +++S+ ++ L+ + + L + L+
Sbjct: 228 ATMS---TKVESLQRASLSNPV---RVSVSSKYQTVSTLQSSYICIPHKHKNLYLVYLLN 281
Query: 437 ERAGMRA 443
E AG A
Sbjct: 282 EFAGQSA 288
Score = 161 (61.7 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 40/93 (43%), Positives = 57/93 (61%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA 206
ESV+ S G A++E + E ++ EL + L ++ +G+K PTPIQ IP
Sbjct: 23 ESVS-SRG--SAKDETQTSGEEPAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPL 79
Query: 207 AAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
A +G+ D+IG AETGSGKT AF LP++Q L+E
Sbjct: 80 AL-EGR-DVIGLAETGSGKTAAFALPMLQALME 110
>UNIPROTKB|A4QYM6 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:CM001233 GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K13181 RefSeq:XP_003712922.1
ProteinModelPortal:A4QYM6 STRING:A4QYM6 GeneID:2683645
KEGG:mgr:MGG_07718 OrthoDB:EOG4B01XM Uniprot:A4QYM6
Length = 790
Score = 188 (71.2 bits), Expect = 7.8e-23, Sum P(4) = 7.8e-23
Identities = 44/114 (38%), Positives = 65/114 (57%)
Query: 258 YAPKG--HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPE 315
Y PK R +I+ PTRELA+Q ++A +++ VGG+S + QE L+ RP+
Sbjct: 319 YRPKKVPTSRVVILAPTRELAIQCHAVATKLASHTDIKFCLAVGGLSLKVQESELRLRPD 378
Query: 316 LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+++ TPGR + M V+ T+ VLDEADRM+E+G EL I+ LP
Sbjct: 379 VIIATPGRFIDHMRNSASFAVD--TVEILVLDEADRMLEDGFADELNEILTTLP 430
Score = 139 (54.0 bits), Expect = 7.8e-23, Sum P(4) = 7.8e-23
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ + L +++ + +GF +PTPIQ IP A GK D++G A TGSGKT AF +PI
Sbjct: 256 SFQSMSLSRPILRGLTSVGFAKPTPIQSKTIPIAL-MGK-DVVGGAVTGSGKTAAFVVPI 313
Query: 234 MQRLLEEREK 243
++RLL +K
Sbjct: 314 LERLLYRPKK 323
Score = 51 (23.0 bits), Expect = 7.8e-23, Sum P(4) = 7.8e-23
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 394 KKRQTLVFSATIALSAD 410
K RQT++FSAT+ S D
Sbjct: 431 KSRQTMLFSATMTSSVD 447
Score = 42 (19.8 bits), Expect = 7.8e-23, Sum P(4) = 7.8e-23
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 40 SSFSAADNDPFAFLVGSNELDGGFLSLEEI 69
SS A ND F + NE D F+ EE+
Sbjct: 4 SSKRKAINDDFITTISDNEADE-FVEEEEV 32
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 181 (68.8 bits), Expect = 8.2e-23, Sum P(2) = 8.2e-23
Identities = 50/179 (27%), Positives = 89/179 (49%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L AL++TPTRELA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGR
Sbjct: 93 LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGR 152
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
L + + + L L + V+DEADR++ E+ I+ ++P + + T+
Sbjct: 153 LIDHLENTKGF--NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTK 210
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFR--KKLKHGSLKLKQSVNGLNSIETLSERAG 440
+Q+ +R L A+S+ ++ +KL+ L + + L+E AG
Sbjct: 211 ------KVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAG 263
Score = 154 (59.3 bits), Expect = 8.2e-23, Sum P(2) = 8.2e-23
Identities = 40/89 (44%), Positives = 54/89 (60%)
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
PD E L + AE E + +L + +L ++ +LG+ +PT IQ IP A QG+ D
Sbjct: 7 PDSPTEALQTAAE-EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLAL-QGR-D 63
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREK 243
IIG AETGSGKT AF LPI+ LLE ++
Sbjct: 64 IIGLAETGSGKTGAFALPILNALLETPQR 92
>WB|WBGene00019219 [details] [associations]
symbol:H20J04.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0002009 GO:GO:0040010
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:FO080156
RefSeq:NP_001040789.1 ProteinModelPortal:Q2WF63 SMR:Q2WF63
PaxDb:Q2WF63 EnsemblMetazoa:H20J04.4b GeneID:186756
KEGG:cel:CELE_H20J04.4 UCSC:H20J04.4a CTD:186756 WormBase:H20J04.4b
InParanoid:Q2WF63 NextBio:932876 ArrayExpress:Q2WF63 Uniprot:Q2WF63
Length = 561
Score = 200 (75.5 bits), Expect = 8.6e-23, Sum P(2) = 8.6e-23
Identities = 46/110 (41%), Positives = 66/110 (60%)
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
P G + ALI+TPTRELA Q+ + + K I ++ IVGG S Q R L RP +VV
Sbjct: 155 PYG-IYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVA 213
Query: 320 TPGRLWELMSGGEKHLVELHT-LSFFVLDEADRMIENGHFRELQSIIDML 368
TPGRL +L+ + ++ + FFVLDEADRM+E + +L+ I + +
Sbjct: 214 TPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESI 263
Score = 136 (52.9 bits), Expect = 8.6e-23, Sum P(2) = 8.6e-23
Identities = 31/83 (37%), Positives = 52/83 (62%)
Query: 156 DDAEEEL-VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
DD + + +SE ++T+ +++L + + + + + K TP+Q ACIP +G D
Sbjct: 73 DDTPKPIQISEDNMTTK--KFSQLGVCSWITQQLQTMQIKTATPVQAACIPKIL-EGS-D 128
Query: 215 IIGAAETGSGKTLAFGLPIMQRL 237
I+G A TG+GKTLAF +PI+Q+L
Sbjct: 129 ILGCARTGTGKTLAFAIPILQKL 151
Score = 61 (26.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 32/126 (25%), Positives = 56/126 (44%)
Query: 303 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 362
T+ LL+A E V+G +L EL KH+ + T EA+ +EN F E +
Sbjct: 442 TQYDVELLQA-VEQVIGK--KLDELKVS-PKHVTKYVTQVLVAKKEAELKLENQKFGEKK 497
Query: 363 SIIDMLPMT-NGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK 421
I + +G +E ++++ + + KR+ S + F+KKL + K
Sbjct: 498 EINRRKELLMSGMDEDEADRHLEEMRTRRMTNSKRKLEKISGQLDKRDRFQKKL--AAKK 555
Query: 422 LKQSVN 427
+K+ N
Sbjct: 556 VKKEEN 561
Score = 44 (20.5 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
F+++Q + L + EGQ Q S+ +KRQTL+ SATI
Sbjct: 233 FKKIQFFV--LDEADRMLEGQYND-QLKPIFESIS-EKRQTLLLSATI 276
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 202 (76.2 bits), Expect = 8.8e-23, Sum P(3) = 8.8e-23
Identities = 41/114 (35%), Positives = 71/114 (62%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R L+++PTRELA+Q ++L + +G N++ V + GG +Q R K +++GTPGRL
Sbjct: 238 RVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQARAAK-NASVIIGTPGRL 296
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP--MTNGSNE 376
+L++ G ++ + + VLDEADRM++ G +++++II P NGS +
Sbjct: 297 LDLINDGS---IDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNGSRQ 347
Score = 124 (48.7 bits), Expect = 8.8e-23, Sum P(3) = 8.8e-23
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 193 FKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL--LEEREKAGKML 248
+KEPTPIQ A P G+ D++G AETGSGKT+AFG+P +Q L L + + ++L
Sbjct: 185 YKEPTPIQAATWPYLL-AGR-DVVGIAETGSGKTVAFGIPALQYLNGLSDNKSVPRVL 240
Score = 48 (22.0 bits), Expect = 8.8e-23, Sum P(3) = 8.8e-23
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 396 RQTLVFSATI-----ALSADFRK---KLKHGSLKLKQSVNGLNSIETLSE 437
RQT+ FSAT AL+A F K K+ GS +L S N +E L +
Sbjct: 346 RQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDD 395
>UNIPROTKB|F1NYX0 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:AADN02071779
EMBL:AADN02071780 IPI:IPI00822654 Ensembl:ENSGALT00000035055
ArrayExpress:F1NYX0 Uniprot:F1NYX0
Length = 482
Score = 171 (65.3 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 40/113 (35%), Positives = 65/113 (57%)
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
P G + L++TPTRELA Q+ + + + K + ++ +VGG+ Q L +P +V+
Sbjct: 71 PYG-IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRKPHVVIA 129
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG--HFR-ELQSIIDMLP 369
TPGRL + + + L L F VLDEADR++E G F +L+ I++ +P
Sbjct: 130 TPGRLADHLRSS--NTFSLKKLKFLVLDEADRLLEQGCADFTADLEVILEAVP 180
Score = 153 (58.9 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
S+ A+ EL L P L++ ++G PTP+Q +CIP QG+ D +G A+TGSGKT A
Sbjct: 1 SSGMAAFRELGLAPWLVEQARQMGLSRPTPVQASCIPPIL-QGR-DCLGCAKTGSGKTAA 58
Query: 229 FGLPIMQRLLEE 240
F LP++Q L E+
Sbjct: 59 FVLPVLQVLSED 70
Score = 50 (22.7 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 395 KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSER 438
+RQTL+FSAT+ + + K L ++ + + +++ L +R
Sbjct: 182 RRQTLLFSATLTDTLNELKSLAMNRPFFWEAASEVRTVDELDQR 225
>UNIPROTKB|G4MSR4 [details] [associations]
symbol:MGG_07099 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_003715292.1 EnsemblFungi:MGG_07099T0
GeneID:2682984 KEGG:mgr:MGG_07099 Uniprot:G4MSR4
Length = 717
Score = 279 (103.3 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 80/221 (36%), Positives = 131/221 (59%)
Query: 157 DAEEELVSEAEISTEFDAWNEL---RLHPLLMKSI-YRLGFKEPTPIQKACIPAAAHQGK 212
+A++EL S ST+ +++L + ++K+I + +++ T +Q + A A +GK
Sbjct: 59 EAQQEL-SVQPGSTKITKFSDLAKANIDESIIKAITVDMRYEDMTDVQSMTL-APALKGK 116
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGE-EAEKYAPKGHLRALIITP 271
D++ A+TG+GKTLAF +P++Q++L+ A L+E ++A + ++A+II+P
Sbjct: 117 -DLVAQAKTGTGKTLAFLIPVIQKILD----ADPSLKEVSRGRPRRFAQRQSIKAIIISP 171
Query: 272 TRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPE---LVVGTPGRLWELM 328
TRELA Q+ + + V V VGG T K+E L + E L+VGTPGRL +L+
Sbjct: 172 TRELAEQIGKEATRLCQRNGVTVQTAVGG--TGKRESLRRIHMEGCHLLVGTPGRLNDLL 229
Query: 329 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
S E ++ + VLDEADRM++ G EL+SI+DMLP
Sbjct: 230 SD-ELSGIDASNVQALVLDEADRMLDVGFENELRSIVDMLP 269
Score = 44 (20.5 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 392 QRKKRQTLVFSATI 405
Q+ RQTL+FSAT+
Sbjct: 272 QQVPRQTLLFSATL 285
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 188 (71.2 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 41/109 (37%), Positives = 64/109 (58%)
Query: 261 KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGT 320
+G +RAL+I PTRELA Q+ D + + +R V + GG+ Q + LKA E+VV
Sbjct: 68 RGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAGAEVVVAC 127
Query: 321 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
PGRL + ++ G ++L L VLDEAD+M + G +++ ++ LP
Sbjct: 128 PGRLLDHIAQGT---IDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLP 173
Score = 136 (52.9 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 181 HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE- 239
HP + I G++ PTPIQ IPA G+ D++G A+TG+GKT AF LPI+ RL +
Sbjct: 9 HPAVATGIAAAGYETPTPIQAQAIPAVM-AGR-DVMGLAQTGTGKTAAFALPILHRLQQG 66
Query: 240 ER 241
ER
Sbjct: 67 ER 68
Score = 43 (20.2 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 395 KRQTLVFSATIAL 407
+RQTL+FSAT+ +
Sbjct: 175 RRQTLLFSATMPI 187
>GENEDB_PFALCIPARUM|PFL2475w [details] [associations]
symbol:PFL2475w "DEAD/DEAH box helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 KO:K13181 RefSeq:XP_001350899.1
ProteinModelPortal:Q8I4R9 EnsemblProtists:PFL2475w:mRNA
GeneID:811547 KEGG:pfa:PFL2475w EuPathDB:PlasmoDB:PF3D7_1251500
HOGENOM:HOG000283593 OMA:ANSFMEL ProtClustDB:CLSZ2433580
Uniprot:Q8I4R9
Length = 717
Score = 271 (100.5 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 73/221 (33%), Positives = 113/221 (51%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA 206
E ++S ++E + I W++L + +K +Y F PT IQ+ IP
Sbjct: 61 ERTSISRNNKNSENPKKNNNNIIDMNCLWSDLYISRPFLKVLYEQKFSNPTYIQRDVIPL 120
Query: 207 AAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 266
A +GK I+ +ETGSGKTLAF LPI++RLL+ + KG Y +A
Sbjct: 121 AL-EGK-SILANSETGSGKTLAFVLPILERLLQSVNIKMRRNNMKGS----Y---NITKA 171
Query: 267 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 326
LI+ PTREL+LQ D ++ + K + + GG+ ++QE K R ++ V TPGR+ +
Sbjct: 172 LILLPTRELSLQCYDVIRSLTKYVTITYSLFCGGIDIKQQEYEFKKRNDIFVCTPGRILD 231
Query: 327 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
L+ + L V DEAD+++E G E I+D+
Sbjct: 232 LLLNSSSDFINY--LEIVVFDEADKLLELGFKEECLKILDV 270
Score = 53 (23.7 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 383 QTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK 421
+ C+ + + + K+Q L FSAT L++D K+L + SLK
Sbjct: 262 EECLKILDVCKFKKQILFFSAT--LTSDI-KQLANFSLK 297
>UNIPROTKB|Q8I4R9 [details] [associations]
symbol:PFL2475w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 KO:K13181 RefSeq:XP_001350899.1
ProteinModelPortal:Q8I4R9 EnsemblProtists:PFL2475w:mRNA
GeneID:811547 KEGG:pfa:PFL2475w EuPathDB:PlasmoDB:PF3D7_1251500
HOGENOM:HOG000283593 OMA:ANSFMEL ProtClustDB:CLSZ2433580
Uniprot:Q8I4R9
Length = 717
Score = 271 (100.5 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 73/221 (33%), Positives = 113/221 (51%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA 206
E ++S ++E + I W++L + +K +Y F PT IQ+ IP
Sbjct: 61 ERTSISRNNKNSENPKKNNNNIIDMNCLWSDLYISRPFLKVLYEQKFSNPTYIQRDVIPL 120
Query: 207 AAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 266
A +GK I+ +ETGSGKTLAF LPI++RLL+ + KG Y +A
Sbjct: 121 AL-EGK-SILANSETGSGKTLAFVLPILERLLQSVNIKMRRNNMKGS----Y---NITKA 171
Query: 267 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 326
LI+ PTREL+LQ D ++ + K + + GG+ ++QE K R ++ V TPGR+ +
Sbjct: 172 LILLPTRELSLQCYDVIRSLTKYVTITYSLFCGGIDIKQQEYEFKKRNDIFVCTPGRILD 231
Query: 327 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
L+ + L V DEAD+++E G E I+D+
Sbjct: 232 LLLNSSSDFINY--LEIVVFDEADKLLELGFKEECLKILDV 270
Score = 53 (23.7 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 383 QTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK 421
+ C+ + + + K+Q L FSAT L++D K+L + SLK
Sbjct: 262 EECLKILDVCKFKKQILFFSAT--LTSDI-KQLANFSLK 297
>CGD|CAL0000625 [details] [associations]
symbol:SPB4 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K14809 EMBL:AACQ01000202 EMBL:AACQ01000200
RefSeq:XP_711358.1 RefSeq:XP_711406.1 ProteinModelPortal:Q59NP8
STRING:Q59NP8 GeneID:3647008 GeneID:3647042 KEGG:cal:CaO19.11631
KEGG:cal:CaO19.4154 CGD:CAL0005749 Uniprot:Q59NP8
Length = 631
Score = 280 (103.6 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 64/211 (30%), Positives = 120/211 (56%)
Query: 169 STEFDAWNELR--LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+TE AW LR LHP + ++I +G+ TP+Q + IP + G D++ A TGSGKT
Sbjct: 4 NTESLAWENLRYDLHPWIKEAISSMGYPTMTPVQASTIPLLS--GNKDVVVEAVTGSGKT 61
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
L+F +P++Q++ + K + G+ E +GH+ +++++PTRELA Q+ +V
Sbjct: 62 LSFVIPVLQKISDRLYKP----DSDGDLPEP-VKRGHMLSIVLSPTRELANQIQSVFNQV 116
Query: 287 A------KGINVRVVPIVGGMSTEKQE--RLLKARPELVVGTPGRLWELMSGGEKHLVEL 338
KG + +VG + +++ + L +P++++GTPGR+ E + G ++
Sbjct: 117 LQYLPEDKGTRINTQLLVGSIGNVREDLNQFLTNQPQILIGTPGRILEFL--GSSQSIKT 174
Query: 339 HTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+L +LDEAD++++ +++ +I+ LP
Sbjct: 175 SSLEIVILDEADKLLDFSFEKDVINILKKLP 205
Score = 38 (18.4 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 394 KKRQTLVFSATIA 406
K+R+T +FSATI+
Sbjct: 206 KQRRTGLFSATIS 218
>UNIPROTKB|F1Q073 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
Length = 767
Score = 174 (66.3 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 39/104 (37%), Positives = 62/104 (59%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R L++ PTREL +QV K++A+ N+ VGG+ + QE L+A P++++ TPGRL
Sbjct: 260 RVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRL 319
Query: 325 WE-LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
+ L + HL + L +LDEADRM++ +++ II M
Sbjct: 320 IDHLHNCPSFHLSSIEVL---ILDEADRMLDEYFEEQMKEIIRM 360
Score = 165 (63.1 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 167 EISTEFD---AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
E ++++D ++ ++ L L+K+I +GFK+PTPIQKACIP GK DI A TG+
Sbjct: 178 EDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGL-LGK-DICACAATGT 235
Query: 224 GKTLAFGLPIMQRLL 238
GKT AF LP+++RL+
Sbjct: 236 GKTAAFALPVLERLI 250
Score = 41 (19.5 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 396 RQTLVFSATIALSADFRKKLKHGSLK 421
RQT++FSAT+ D K L SLK
Sbjct: 365 RQTMLFSATMT---DEVKDLASVSLK 387
Score = 41 (19.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 244 AGKMLE-EKGEEAEKYAPK 261
A ++LE EKG+EA + P+
Sbjct: 602 AKRLLEREKGKEASNHEPE 620
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 177 (67.4 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 44/135 (32%), Positives = 70/135 (51%)
Query: 259 APKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVV 318
AP+G L L + PTRELA Q+ D + I V+ +VGG+ + Q L +P +VV
Sbjct: 184 APQG-LFCLALAPTRELAYQIADQFNAIGSTIGVKTCVLVGGIDSMSQSLALAKKPHVVV 242
Query: 319 GTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQ 378
G+PGR+ + + L ++ +F++DEADR+ E+ +I+ ++P N
Sbjct: 243 GSPGRVLHHLEHTKGF--NLRSIKYFIMDEADRLFSADFEEEVNNILKVIPKER--NTYL 298
Query: 379 SEQTQTCVTVSSLQR 393
T T V+ LQR
Sbjct: 299 FSATMTS-KVAKLQR 312
Score = 157 (60.3 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 39/95 (41%), Positives = 59/95 (62%)
Query: 145 VEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACI 204
+EE + +N EEE E + F++ L +HP ++ + +LGF +P IQ+ I
Sbjct: 97 IEEFINNTNQKKSEEEEKKYE---NVTFES---LGVHPQIIDACNKLGFNKPKEIQRESI 150
Query: 205 PAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
P A +G+ DIIG A+TGSGKT AF +P++Q+LLE
Sbjct: 151 PWAL-KGR-DIIGLAQTGSGKTAAFVIPVLQKLLE 183
Score = 40 (19.1 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 394 KKRQTLVFSATIALSADFRKKLKHGSL--KLK-QSVNGLNSIETLSER 438
K+R T +FSAT+ KL+ SL +K Q + +++TL ++
Sbjct: 292 KERNTYLFSATMTSKV---AKLQRASLVNPVKVQVASKYQTVDTLLQQ 336
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 270 (100.1 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 67/192 (34%), Positives = 107/192 (55%)
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
L L L+ +I G+ +PTP+Q+ IPA QG+ D++ AA+TG+GKT F LPI++RL
Sbjct: 6 LGLSEALVGAIEAAGYTQPTPVQQRAIPAVL-QGR-DLMVAAQTGTGKTGGFALPILERL 63
Query: 238 LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
++++++ P+ R L++TPTRELA QV D K A+ + I
Sbjct: 64 FPNGHP---------DKSQRHGPR-QPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACI 113
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
GG+ Q + + +++V PGRL +L G V+L + VLDEADRM++ G
Sbjct: 114 FGGVGMNPQVQAMARGVDVLVACPGRLLDLAGQGS---VDLSHVEILVLDEADRMLDMGF 170
Query: 358 FRELQSIIDMLP 369
+++ ++ LP
Sbjct: 171 VHDVKKVLARLP 182
Score = 51 (23.0 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 395 KRQTLVFSATIALS-ADFRKKLKHGSLKLKQSVNGLNSIETLSER 438
KRQ L+FSAT + D KL H +++ + ++E + +R
Sbjct: 184 KRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPN-TTVERIEQR 227
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 170 (64.9 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 37/81 (45%), Positives = 55/81 (67%)
Query: 167 EISTEFD---AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
E ++E+D ++ ++ L L+K+I +GFK+PTPIQKACIP GK DI A TG+
Sbjct: 175 EDASEYDKSLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGL-LGK-DICACAATGT 232
Query: 224 GKTLAFGLPIMQRLLEEREKA 244
GKT AF LP+++RL+ + +A
Sbjct: 233 GKTAAFALPVLERLIYKPRQA 253
Score = 169 (64.5 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 38/104 (36%), Positives = 62/104 (59%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R L++ PTREL +QV K++A+ ++ VGG+ + QE L+A P++++ TPGRL
Sbjct: 257 RVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRL 316
Query: 325 WE-LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
+ L + HL + L +LDEADRM++ +++ II M
Sbjct: 317 IDHLHNCPSFHLSSIEVL---ILDEADRMLDEYFEEQMKEIIRM 357
Score = 41 (19.5 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 396 RQTLVFSATIALSADFRKKLKHGSLK 421
RQT++FSAT+ D K L SLK
Sbjct: 362 RQTMLFSATMT---DEVKDLASVSLK 384
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 177 (67.4 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 48/179 (26%), Positives = 89/179 (49%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L AL++TPTRELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGR
Sbjct: 93 LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGR 152
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
L + + + L L + V+DEADR++ E+ I+ ++P + + T+
Sbjct: 153 LIDHLENTKGF--NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTK 210
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFR--KKLKHGSLKLKQSVNGLNSIETLSERAG 440
+Q+ +R L A+S+ ++ +KL+ + + + L+E AG
Sbjct: 211 ------KVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAG 263
Score = 154 (59.3 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 39/91 (42%), Positives = 56/91 (61%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+ P +A + +V E E T + +L + +L ++ +LG+ +PT IQ IP A QG+
Sbjct: 8 DSPTEASQPIVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 62
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
DIIG AETGSGKT AF LPI+ LLE ++
Sbjct: 63 -DIIGLAETGSGKTGAFALPILNALLETPQR 92
>ASPGD|ASPL0000054300 [details] [associations]
symbol:AN0583 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 RefSeq:XP_658187.1 ProteinModelPortal:Q5BFU7
STRING:Q5BFU7 EnsemblFungi:CADANIAT00002094 GeneID:2876361
KEGG:ani:AN0583.2 HOGENOM:HOG000246455 OMA:HLKVEMN
OrthoDB:EOG4JWZP1 Uniprot:Q5BFU7
Length = 936
Score = 203 (76.5 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 46/119 (38%), Positives = 73/119 (61%)
Query: 253 EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKA 312
E+ + ++ K R LI++P+RELALQ +KE+ KG +++ V +VGG S E+Q ++
Sbjct: 151 EKLKSHSTKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAG 210
Query: 313 RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 371
P++V+ TPGR L E +L +L ++ + V DEADR+ E G +L I+ LP T
Sbjct: 211 NPDIVIATPGRFLHLKV--EMNL-DLSSIKYVVFDEADRLFEMGFAAQLTEILHGLPST 266
Score = 134 (52.2 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
L+ L+K+I R GF PTPIQ+ IP D++G A TGSGKT AF +P++++L
Sbjct: 98 LNANLLKAIARKGFSVPTPIQRKTIPVIMEDQ--DVVGMARTGSGKTAAFVIPMIEKLKS 155
Query: 240 EREKAG 245
K G
Sbjct: 156 HSTKFG 161
Score = 42 (19.8 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 9/13 (69%), Positives = 11/13 (84%)
Query: 396 RQTLVFSATIALS 408
RQTL+FSAT+ S
Sbjct: 267 RQTLLFSATLPKS 279
>UNIPROTKB|J9P9C6 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
Length = 788
Score = 174 (66.3 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 39/104 (37%), Positives = 62/104 (59%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R L++ PTREL +QV K++A+ N+ VGG+ + QE L+A P++++ TPGRL
Sbjct: 281 RVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRL 340
Query: 325 WE-LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
+ L + HL + L +LDEADRM++ +++ II M
Sbjct: 341 IDHLHNCPSFHLSSIEVL---ILDEADRMLDEYFEEQMKEIIRM 381
Score = 165 (63.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 167 EISTEFD---AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
E ++++D ++ ++ L L+K+I +GFK+PTPIQKACIP GK DI A TG+
Sbjct: 199 EDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGL-LGK-DICACAATGT 256
Query: 224 GKTLAFGLPIMQRLL 238
GKT AF LP+++RL+
Sbjct: 257 GKTAAFALPVLERLI 271
Score = 41 (19.5 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 396 RQTLVFSATIALSADFRKKLKHGSLK 421
RQT++FSAT+ D K L SLK
Sbjct: 386 RQTMLFSATMT---DEVKDLASVSLK 408
Score = 41 (19.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 244 AGKMLE-EKGEEAEKYAPK 261
A ++LE EKG+EA + P+
Sbjct: 623 AKRLLEREKGKEASNHEPE 641
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 181 (68.8 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 39/111 (35%), Positives = 63/111 (56%)
Query: 259 APKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVV 318
AP+ L AL++TPTRELA Q+++ + + I V IVGG+ + Q L +P +++
Sbjct: 90 APQ-RLFALVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSLALAKKPHIII 148
Query: 319 GTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
TPGRL + + + L L F V+DEADR++ E+ I+ ++P
Sbjct: 149 ATPGRLVDHLENTKGF--NLRALKFLVMDEADRILNMDFETEVDKILKVIP 197
Score = 149 (57.5 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 165 EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSG 224
E + E ++ +L + +L ++ +LG+K PT IQ IP A QG+ DIIG AETGSG
Sbjct: 17 EVPVVEEARSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVAL-QGR-DIIGLAETGSG 74
Query: 225 KTLAFGLPIMQRLLEEREK 243
KT AF LPI+Q LL+ ++
Sbjct: 75 KTGAFALPILQALLDAPQR 93
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 170 (64.9 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 40/113 (35%), Positives = 65/113 (57%)
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
P G + L++TPTRELA Q+ + + + K + ++ IVGGM Q L +P +V+
Sbjct: 68 PYG-IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSRKPHVVIA 126
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG--HFR-ELQSIIDMLP 369
TPGRL + + + + + F VLDEADR++E G F +L++I+ +P
Sbjct: 127 TPGRLADHLRSS--NTFNMKKIRFLVLDEADRLLEQGCTDFTADLETILSAVP 177
Score = 162 (62.1 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
ELRL L++ +LG K+PTP+Q CIPA +G+ D +G A+TGSGKT AF LPI+Q+
Sbjct: 6 ELRLSSWLVEQCRQLGLKQPTPVQLGCIPAIL-EGR-DCLGCAKTGSGKTAAFVLPILQK 63
Query: 237 LLEE 240
L E+
Sbjct: 64 LSED 67
Score = 52 (23.4 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 376 EGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+G ++ T T+ S +RQTL+FSAT+
Sbjct: 160 QGCTDFTADLETILSAVPARRQTLLFSATL 189
>UNIPROTKB|F6S4E6 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
IPI:IPI00641634 SMR:F6S4E6 Ensembl:ENST00000415027
Ensembl:ENST00000432189 Ensembl:ENST00000444267
Ensembl:ENST00000444480 Ensembl:ENST00000451051
Ensembl:ENST00000452908 Ensembl:ENST00000456662 Uniprot:F6S4E6
Length = 231
Score = 170 (64.9 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 43/111 (38%), Positives = 63/111 (56%)
Query: 262 GHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKAR-PELVVG 319
G + L++ TRELA Q++ + +K + NV+V GG+S +K E +LK P +VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR-ELQSIIDMLP 369
TPGR+ L K L L + F+LDE D+M+E R ++Q I M P
Sbjct: 172 TPGRILALARN--KSL-NLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTP 219
Score = 116 (45.9 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 30/95 (31%), Positives = 52/95 (54%)
Query: 146 EESVTVSNGPDDAE---EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
++ V + G D AE ++ V + +S + + L P L+++I GF+ P+ +Q
Sbjct: 15 DDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 203 CIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
CIP A G +D++ A++G GKT F L +Q+L
Sbjct: 75 CIPQAI-LG-MDVLCQAKSGMGKTAVFVLATLQQL 107
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 181 (68.8 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 50/179 (27%), Positives = 89/179 (49%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L AL++TPTRELA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGR
Sbjct: 93 LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGR 152
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
L + + + L L + V+DEADR++ E+ I+ ++P + + T+
Sbjct: 153 LIDHLENTKGF--NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTK 210
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFR--KKLKHGSLKLKQSVNGLNSIETLSERAG 440
+Q+ +R L A+S+ ++ +KL+ L + + L+E AG
Sbjct: 211 ------KVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAG 263
Score = 148 (57.2 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 39/89 (43%), Positives = 53/89 (59%)
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
PD L + AE E + +L + +L ++ +LG+ +PT IQ IP A QG+ D
Sbjct: 7 PDSPSGALQTAAE-EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLAL-QGR-D 63
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREK 243
IIG AETGSGKT AF LPI+ LLE ++
Sbjct: 64 IIGLAETGSGKTGAFALPILNALLETPQR 92
>UNIPROTKB|Q96GQ7 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
Length = 796
Score = 171 (65.3 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 38/104 (36%), Positives = 62/104 (59%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R L++ PTREL +QV +++A+ N+ VGG+ + QE L+A P++++ TPGRL
Sbjct: 291 RVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRL 350
Query: 325 WE-LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
+ L + HL + L +LDEADRM++ +++ II M
Sbjct: 351 IDHLHNCPSFHLSSIEVL---ILDEADRMLDEYFEEQMKEIIRM 391
Score = 167 (63.8 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 36/81 (44%), Positives = 55/81 (67%)
Query: 167 EISTEFD---AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
E ++++D ++ ++ L L+K+I +GFK+PTPIQKACIP GK DI A TG+
Sbjct: 209 EDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGL-LGK-DICACAATGT 266
Query: 224 GKTLAFGLPIMQRLLEEREKA 244
GKT AF LP+++RL+ + +A
Sbjct: 267 GKTAAFALPVLERLIYKPRQA 287
Score = 44 (20.5 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 25/97 (25%), Positives = 46/97 (47%)
Query: 243 KAGKMLEEKGEEAEKY------APKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
+AG+ + GE+ K A K ++A I+ P +++ L+ D ++++ K + V+
Sbjct: 559 RAGRSVSLVGEDERKMLKEIVKAAKAPVKARIL-P-QDVILKFRDKIEKMEKDVYA-VLQ 615
Query: 297 IVGG----MSTEKQ----ERLLKARPELVVGTPGRLW 325
+ +E Q +RLL+ E VV P R W
Sbjct: 616 LEAEEKEMQQSEAQINTAKRLLEKGKEAVVQEPERSW 652
Score = 41 (19.5 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 396 RQTLVFSATIALSADFRKKLKHGSLK 421
RQT++FSAT+ D K L SLK
Sbjct: 396 RQTMLFSATMT---DEVKDLASVSLK 418
Score = 41 (19.5 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 235 QRLLEERE-KAGKMLEEKGEEAEKYAPK 261
+R E++E K+GK+ +EK E E PK
Sbjct: 127 KRKTEDKEAKSGKLEKEK-EAKEGSEPK 153
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 271 (100.5 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 66/168 (39%), Positives = 106/168 (63%)
Query: 193 FKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKG 252
F++P+PIQ P G+ D+IG A+TGSGKTLAFG+P + +L++ +K G G
Sbjct: 134 FEKPSPIQSHTWPFLL-DGR-DLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGG-----G 186
Query: 253 EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKA 312
++K P L+++PTRELA+Q++D L+E + ++ + + GG S Q +++
Sbjct: 187 --SKKVNPT----CLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRS 240
Query: 313 RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 360
++V+GTPGRL +L+ E +++ L +SF VLDEADRM++ G F E
Sbjct: 241 GVDIVIGTPGRLRDLI---ESNVLRLSDVSFVVLDEADRMLDMG-FEE 284
Score = 44 (20.5 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 11 EHSKETKPNRRKRTRKSREAEK 32
E K ++KR R+ +E+EK
Sbjct: 53 EEELSNKEKKKKRKREEKESEK 74
Score = 39 (18.8 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 11 EHSKETKPNRRKRTRKSREAEK 32
E S + K +RKR K E K
Sbjct: 55 ELSNKEKKKKRKREEKESEKNK 76
>ZFIN|ZDB-GENE-021220-2 [details] [associations]
symbol:ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
54" species:7955 "Danio rerio" [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021220-2 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14808
HOGENOM:HOG000246455 GeneTree:ENSGT00550000075100 CTD:79039
HOVERGEN:HBG051333 OrthoDB:EOG469QTB EMBL:CU929062 EMBL:FP236447
EMBL:AY099535 IPI:IPI00481864 RefSeq:NP_775375.1 UniGene:Dr.18320
STRING:Q8JGR2 Ensembl:ENSDART00000026416 Ensembl:ENSDART00000128587
GeneID:286777 KEGG:dre:286777 NextBio:20806437 Uniprot:Q8JGR2
Length = 862
Score = 208 (78.3 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 47/105 (44%), Positives = 65/105 (61%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
RALI+TPTRELALQ KE+ K +R I+GG S + Q L P++++GTPGRL
Sbjct: 150 RALILTPTRELALQTMKFTKELGKFTGLRTALILGGDSMDDQFAALHENPDIIIGTPGRL 209
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
++ E +L +L ++ + V DEADR+ E G +LQ II LP
Sbjct: 210 MHVIQ--EMNL-KLQSVEYVVFDEADRLFEMGFAEQLQEIIRRLP 251
Score = 124 (48.7 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 148 SVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA 207
S VS+ D E + ++ + + + + L + K I + G+K PTPIQ+ IP
Sbjct: 53 SECVSDVELDTRELVRAQNKKKKKSGGFQSMGLSYPVYKGIMKKGYKVPTPIQRKTIPVI 112
Query: 208 AHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 245
GK D++ A TGSGKT AF +P+ ++L + + G
Sbjct: 113 L-DGK-DVVAMARTGSGKTAAFLVPLFEKLKAPQAQTG 148
Score = 42 (19.8 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 396 RQTLVFSATIA-LSADFRK 413
RQTL+FSAT+ L +F +
Sbjct: 254 RQTLLFSATLPKLIVEFAR 272
>UNIPROTKB|A1A4H6 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
GeneID:514567 KEGG:bta:514567 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
Uniprot:A1A4H6
Length = 765
Score = 169 (64.5 bits), Expect = 5.2e-22, Sum P(3) = 5.2e-22
Identities = 38/104 (36%), Positives = 62/104 (59%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R L++ PTREL +QV K++A+ ++ VGG+ + QE L+A P++++ TPGRL
Sbjct: 260 RVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRL 319
Query: 325 WE-LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
+ L + HL + L +LDEADRM++ +++ II M
Sbjct: 320 IDHLHNCPSFHLSSIEVL---ILDEADRMLDEYFEEQMKEIIRM 360
Score = 167 (63.8 bits), Expect = 5.2e-22, Sum P(3) = 5.2e-22
Identities = 36/81 (44%), Positives = 55/81 (67%)
Query: 167 EISTEFD---AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
E ++++D ++ ++ L L+K+I +GFK+PTPIQKACIP GK DI A TG+
Sbjct: 178 EDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGL-LGK-DICACAATGT 235
Query: 224 GKTLAFGLPIMQRLLEEREKA 244
GKT AF LP+++RL+ + +A
Sbjct: 236 GKTAAFALPVLERLIYKPRQA 256
Score = 41 (19.5 bits), Expect = 5.2e-22, Sum P(3) = 5.2e-22
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 396 RQTLVFSATIALSADFRKKLKHGSLK 421
RQT++FSAT+ D K L SLK
Sbjct: 365 RQTMLFSATMT---DEVKDLASVSLK 387
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 189 (71.6 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 40/104 (38%), Positives = 66/104 (63%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
+ LI+TPTRELALQV D + ++ K + VR + + GG + E+Q R L+ E++VGTPGR+
Sbjct: 71 QVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRI 130
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
+ + G K + +LDEAD M++ G ++++I++ L
Sbjct: 131 LDHI--GRKTFPAAE-IKIVILDEADEMLDMGFIDDIEAILNTL 171
Score = 133 (51.9 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
+ + +L L L+K++ LGF+ PTPIQK IP +G +++G A TG+GKT A+ LP
Sbjct: 2 EEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLIL-EGH-NLVGQAPTGTGKTAAYLLP 59
Query: 233 IMQRLLEEREKAGKML 248
++QR+ +R K ++L
Sbjct: 60 VLQRI--QRGKKAQVL 73
Score = 39 (18.8 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 7/11 (63%), Positives = 11/11 (100%)
Query: 395 KRQTLVFSATI 405
++QTL+FSAT+
Sbjct: 174 RQQTLLFSATL 184
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 189 (71.6 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 40/104 (38%), Positives = 66/104 (63%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
+ LI+TPTRELALQV D + ++ K + VR + + GG + E+Q R L+ E++VGTPGR+
Sbjct: 71 QVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRI 130
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
+ + G K + +LDEAD M++ G ++++I++ L
Sbjct: 131 LDHI--GRKTFPAAE-IKIVILDEADEMLDMGFIDDIEAILNTL 171
Score = 133 (51.9 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
+ + +L L L+K++ LGF+ PTPIQK IP +G +++G A TG+GKT A+ LP
Sbjct: 2 EEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLIL-EGH-NLVGQAPTGTGKTAAYLLP 59
Query: 233 IMQRLLEEREKAGKML 248
++QR+ +R K ++L
Sbjct: 60 VLQRI--QRGKKAQVL 73
Score = 39 (18.8 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 7/11 (63%), Positives = 11/11 (100%)
Query: 395 KRQTLVFSATI 405
++QTL+FSAT+
Sbjct: 174 RQQTLLFSATL 184
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 196 (74.1 bits), Expect = 5.4e-22, Sum P(3) = 5.4e-22
Identities = 43/104 (41%), Positives = 65/104 (62%)
Query: 267 LIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
L++ PTRELA+QV + AK + N V+PI GG S ++Q LK P+++VGTPGR+
Sbjct: 77 LVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGPQVIVGTPGRVM 136
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ M G ++L TL VLDEAD M++ G +++ I++ P
Sbjct: 137 DHMRRGT---LKLETLQALVLDEADEMLKMGFIDDIEWILEHTP 177
Score = 135 (52.6 bits), Expect = 5.4e-22, Sum P(3) = 5.4e-22
Identities = 31/74 (41%), Positives = 50/74 (67%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACI-PAAAHQGKVDIIGAAETGSGKT 226
+S++ + EL L L++++ LG+++PTPIQ A I P A GK DI+G A+TG+GKT
Sbjct: 1 MSSDERTFRELGLSENLLRALDELGYEKPTPIQSASIDPLMA--GK-DILGQAQTGTGKT 57
Query: 227 LAFGLPIMQRLLEE 240
AF LP++ ++ +
Sbjct: 58 GAFALPLLNKVTSQ 71
Score = 38 (18.4 bits), Expect = 5.4e-22, Sum P(3) = 5.4e-22
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 434 TLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
T+ E+ AN + + TN+S+ A+ IE
Sbjct: 188 TMPEQIKRVANKHLKNATNISIAASHTTVDSIE 220
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 178 (67.7 bits), Expect = 6.4e-22, Sum P(2) = 6.4e-22
Identities = 55/184 (29%), Positives = 89/184 (48%)
Query: 267 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 326
L++TPTRELA Q+ + + GI + IVGG+ Q L RP ++V TPGRL +
Sbjct: 116 LVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVD 175
Query: 327 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 386
+ + L L F ++DEADR++ EL I+ ++P + + T+
Sbjct: 176 HLENTKGF--NLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSATMTKK-- 231
Query: 387 TVSSLQRKKRQTLVFSATIALSADFRK--KLKHGSLKLKQSVNGLNSIETLSERAGMRAN 444
VS L+R +L A +++S+ ++ LK + + + L+E AG N
Sbjct: 232 -VSKLERA---SLRDPARVSVSSRYKTVDNLKQHYIFVPNKYKETYLVYLLNEHAG---N 284
Query: 445 VAIV 448
AIV
Sbjct: 285 SAIV 288
Score = 150 (57.9 bits), Expect = 6.4e-22, Sum P(2) = 6.4e-22
Identities = 35/80 (43%), Positives = 52/80 (65%)
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAA 219
EE+ + E + ++ EL + L + RLG+ +P+ IQ+A +P A QGK D+IG A
Sbjct: 31 EEIEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHAL-QGK-DVIGLA 88
Query: 220 ETGSGKTLAFGLPIMQRLLE 239
ETGSGKT AF +P++Q LL+
Sbjct: 89 ETGSGKTGAFAIPVLQSLLD 108
Score = 42 (19.8 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ 306
A++ T +Q+ L++ + ++ VP+ G MS EK+
Sbjct: 286 AIVFCATCATTMQIAVMLRQ----LGMQAVPLHGQMSQEKR 322
Score = 40 (19.1 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 377 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLK-----QSVNGLNS 431
GQ Q + +++ + K R+ LV + A D + H + + QS + ++
Sbjct: 315 GQMSQEKRLGSLNKFKSKAREILVCTDVAARGLD----IPHVDMVINYDMPSQSKDYVHR 370
Query: 432 IETLSERAGMRANVAIVDLTNVSVLA-NKLE 461
+ + RAG R+ +AI +T V A K+E
Sbjct: 371 VGRTA-RAG-RSGIAITVVTQYDVEAYQKIE 399
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 164 (62.8 bits), Expect = 6.5e-22, Sum P(3) = 6.5e-22
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 146 EESVTVSNGPDDAEEELVS-EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACI 204
E S++ S+ + + +AE+ +F + EL L P L++SI + F +PTPIQ I
Sbjct: 97 ESSLSSSSSTTSSSITTIDPDAEL--KFKTFKELNLVPDLLESIESMKFTKPTPIQSEAI 154
Query: 205 PAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
P A +GK DIIG A+TGSGKT AF +PI+Q L
Sbjct: 155 PHAL-EGK-DIIGLAQTGSGKTAAFAIPILQSL 185
Score = 160 (61.4 bits), Expect = 6.5e-22, Sum P(3) = 6.5e-22
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
AL++ PTREL Q+ D + + +R IVGGM Q R L +P ++V TPGR+
Sbjct: 194 ALVLAPTRELTFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIM 253
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
+ + + L L + V+DEADR+++ L I+ ++P+
Sbjct: 254 DHLEHTKGF--SLKNLKYLVMDEADRLLDMDFGPALDKILKVIPI 296
Score = 46 (21.3 bits), Expect = 6.5e-22, Sum P(3) = 6.5e-22
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 402 SATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAI--VDLTNVSVLAN 458
+A +A F HG L Q + LN ++ + +VA +D+ +V V+ N
Sbjct: 378 TALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVIN 436
Score = 37 (18.1 bits), Expect = 5.5e-21, Sum P(3) = 5.5e-21
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 395 KRQTLVFSATIALSADFRKKLKHGSL 420
KR T +FSAT+ + KL+ SL
Sbjct: 297 KRTTYLFSATMTNKIE---KLQRASL 319
>TAIR|locus:504955106 [details] [associations]
symbol:emb1138 "embryo defective 1138" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
Uniprot:Q8L7S8
Length = 748
Score = 270 (100.1 bits), Expect = 8.0e-22, Sum P(3) = 8.0e-22
Identities = 80/206 (38%), Positives = 118/206 (57%)
Query: 165 EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSG 224
EA+ E A ++L L L +S+ + G PIQ+A + A QG+ DII A+TG+G
Sbjct: 95 EADDGEEL-AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPAL-QGR-DIIARAKTGTG 151
Query: 225 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL-RALIITPTRELALQVTDHL 283
KTLAFG+PI++RL EE AG + + G L + L++ PTRELA QV +
Sbjct: 152 KTLAFGIPIIKRLTEE---AG--------DYTAFRRSGRLPKFLVLAPTRELAKQVEKEI 200
Query: 284 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 343
KE A ++ V + GG+S Q+ L ++VVGTPGR+ +L+ G L E+ +
Sbjct: 201 KESAPYLST--VCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVE---Y 255
Query: 344 FVLDEADRMIENGHFRELQSIIDMLP 369
VLDEAD+M+ G ++SI++ LP
Sbjct: 256 LVLDEADQMLAVGFEEAVESILENLP 281
Score = 44 (20.5 bits), Expect = 8.0e-22, Sum P(3) = 8.0e-22
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 3 VGSPTLTYE--HSKETKPNRRKRT 24
VG P+L Y+ H + +KPN +KR+
Sbjct: 5 VGVPSL-YQVPHLEISKPNSKKRS 27
Score = 39 (18.8 bits), Expect = 8.0e-22, Sum P(3) = 8.0e-22
Identities = 7/11 (63%), Positives = 11/11 (100%)
Query: 395 KRQTLVFSATI 405
KRQ+++FSAT+
Sbjct: 283 KRQSMLFSATM 293
>ASPGD|ASPL0000072637 [details] [associations]
symbol:AN4903 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BN001303 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACD01000084 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 RefSeq:XP_662507.1 ProteinModelPortal:Q5B3H7
EnsemblFungi:CADANIAT00005498 GeneID:2872706 KEGG:ani:AN4903.2
HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW Uniprot:Q5B3H7
Length = 525
Score = 173 (66.0 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 48/142 (33%), Positives = 75/142 (52%)
Query: 241 REKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIV 298
R +GK + +K+A P G + A+I+TPTRELALQ+ + +K ++ +++ V I
Sbjct: 140 RTGSGKTIAFSVPILQKWAEDPFG-IFAVILTPTRELALQIFEQIKAISAPQSMKPVLIT 198
Query: 299 GGMSTEKQERLLKARPELVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
GG Q L RP +VV TPGRL + + + G + L + VLDEADR++ G
Sbjct: 199 GGTDMRSQAIELAGRPHVVVATPGRLADHINTSGTDTVAGLKRVRMVVLDEADRLLSPGP 258
Query: 358 FRELQSIIDMLPMTNGSNEGQS 379
L + L G ++ Q+
Sbjct: 259 GSMLPDVETCLSFLPGPSQRQT 280
Score = 153 (58.9 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 36/92 (39%), Positives = 58/92 (63%)
Query: 152 SNGPDDAEEELVSEA-EI--STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAA 208
S+ DD L+ +A EI + E +++ L + P L+ S+ + ++PT IQ+ACIP
Sbjct: 71 SSRKDDENPVLIKDALEIGLNAEENSFKALNVAPWLVGSLTTMAVRKPTAIQRACIPEIL 130
Query: 209 HQGKVDIIGAAETGSGKTLAFGLPIMQRLLEE 240
+G+ D IG + TGSGKT+AF +PI+Q+ E+
Sbjct: 131 -KGR-DCIGGSRTGSGKTIAFSVPILQKWAED 160
Score = 40 (19.1 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 383 QTCVTVSSLQRKKRQTLVFSATI 405
+TC++ +RQTL+F+AT+
Sbjct: 266 ETCLSFLP-GPSQRQTLLFTATL 287
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 181 (68.8 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 50/179 (27%), Positives = 89/179 (49%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L AL++TPTRELA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGR
Sbjct: 92 LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGR 151
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
L + + + L L + V+DEADR++ E+ I+ ++P + + T+
Sbjct: 152 LIDHLENTKGF--NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTK 209
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFR--KKLKHGSLKLKQSVNGLNSIETLSERAG 440
+Q+ +R L A+S+ ++ +KL+ L + + L+E AG
Sbjct: 210 ------KVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAG 262
Score = 143 (55.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
+A + V E E T + +L + +L ++ +LG+ +PT IQ IP A QG+ DII
Sbjct: 11 EAPQTAVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR-DII 64
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREK 243
G AETGSGKT AF LPI+ LLE ++
Sbjct: 65 GLAETGSGKTGAFALPILNALLETPQR 91
>SGD|S000002189 [details] [associations]
symbol:DBP10 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=IGI;IPI] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002189
GO:GO:0005524 GO:GO:0005730 EMBL:BK006938 GO:GO:0003723
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:Z71781 GO:GO:0000463 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:HLKVEMN OrthoDB:EOG4JWZP1 EMBL:Z74079 PIR:S67564
RefSeq:NP_010253.2 ProteinModelPortal:Q12389 SMR:Q12389
DIP:DIP-6387N IntAct:Q12389 MINT:MINT-613064 STRING:Q12389
PaxDb:Q12389 PeptideAtlas:Q12389 EnsemblFungi:YDL031W GeneID:851530
KEGG:sce:YDL031W CYGD:YDL031w GeneTree:ENSGT00550000075100
NextBio:968920 Genevestigator:Q12389 GermOnline:YDL031W
GO:GO:0000466 Uniprot:Q12389
Length = 995
Score = 191 (72.3 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 42/119 (35%), Positives = 72/119 (60%)
Query: 253 EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKA 312
E+ + ++ K RA+I++P+RELA+Q + K+ A+G +R V + GG S E+Q ++
Sbjct: 197 EKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMT 256
Query: 313 RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 371
P++++ TPGR L E +L +L ++ + V DEADR+ E G +L ++ LP T
Sbjct: 257 NPDVIIATPGRFLHLKV--EMNL-DLKSVEYVVFDEADRLFEMGFQEQLNELLASLPTT 312
Score = 138 (53.6 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
L +++ +I R GF++PTPIQ+ IP Q + DI+G A TGSGKT AF LP++++L
Sbjct: 144 LSKIVLNNIKRKGFRQPTPIQRKTIPLIL-QSR-DIVGMARTGSGKTAAFILPMVEKLKS 201
Query: 240 EREKAG 245
K G
Sbjct: 202 HSGKIG 207
Score = 46 (21.3 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 396 RQTLVFSATIALS-ADFRK 413
RQTL+FSAT+ S DF K
Sbjct: 313 RQTLLFSATLPNSLVDFVK 331
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 270 (100.1 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 68/192 (35%), Positives = 110/192 (57%)
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
L L L+++I G+ +PTP+Q+ IPA QG+ D++ AA+TG+GKT F LPI++RL
Sbjct: 6 LGLSEALVRAIEAAGYTQPTPVQQRAIPAVL-QGR-DLMVAAQTGTGKTGGFALPILERL 63
Query: 238 LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
G + +K ++++ P+ R L++TPTRELA QV + K A+ + I
Sbjct: 64 FPN----G--VPDK---SQRHGPR-QPRVLVLTPTRELAAQVHESFKLYARDLKFVSACI 113
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
GG+ Q + + +++V PGRL +L G V+L + VLDEADRM++ G
Sbjct: 114 FGGVGMNPQVQAMSRGVDVLVACPGRLLDLAGQGS---VDLSHVEILVLDEADRMLDMGF 170
Query: 358 FRELQSIIDMLP 369
+++ ++ LP
Sbjct: 171 VHDVKKVLARLP 182
Score = 44 (20.5 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 395 KRQTLVFSATIALS-ADFRKKLKHGSLKLKQSVNGLNSIETLSER 438
KRQ L+FSAT + KL H +++ + ++E + +R
Sbjct: 184 KRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPN-TTVERIEQR 227
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 185 (70.2 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 41/104 (39%), Positives = 65/104 (62%)
Query: 267 LIITPTRELALQVTDHLKEVAKGIN-VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
L++ PTRELA+QV + + + +K + V VV + GG + Q R L+ P++VVGTPGRL
Sbjct: 78 LVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLL 137
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ + G ++L LS VLDEAD M+ G ++++I+ +P
Sbjct: 138 DHLKRGT---LDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIP 178
Score = 143 (55.4 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
AE T F +L L +++++ LG+++P+PIQ CIP + G+ D++G A+TGSGK
Sbjct: 2 AEFETTFA---DLGLKAPILEALNDLGYEKPSPIQAECIPHLLN-GR-DVLGMAQTGSGK 56
Query: 226 TLAFGLPIMQRLLEEREKAGKML 248
T AF LP++Q L E KA ++L
Sbjct: 57 TAAFSLPLLQNLDPEL-KAPQIL 78
>UNIPROTKB|Q9Y6V7 [details] [associations]
symbol:DDX49 "Probable ATP-dependent RNA helicase DDX49"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC002985 KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
HOVERGEN:HBG100512 EMBL:AK223294 EMBL:BC002674 IPI:IPI00003739
RefSeq:NP_061943.2 UniGene:Hs.143187 ProteinModelPortal:Q9Y6V7
SMR:Q9Y6V7 IntAct:Q9Y6V7 STRING:Q9Y6V7 PhosphoSite:Q9Y6V7
DMDM:74753527 PaxDb:Q9Y6V7 PRIDE:Q9Y6V7 DNASU:54555
Ensembl:ENST00000247003 GeneID:54555 KEGG:hsa:54555 UCSC:uc002nkq.2
CTD:54555 GeneCards:GC19P019030 HGNC:HGNC:18684 neXtProt:NX_Q9Y6V7
PharmGKB:PA134956171 InParanoid:Q9Y6V7 OrthoDB:EOG4C87SC
PhylomeDB:Q9Y6V7 GenomeRNAi:54555 NextBio:57032 ArrayExpress:Q9Y6V7
Bgee:Q9Y6V7 CleanEx:HS_DDX49 Genevestigator:Q9Y6V7
GermOnline:ENSG00000105671 Uniprot:Q9Y6V7
Length = 483
Score = 166 (63.5 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 39/113 (34%), Positives = 65/113 (57%)
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
P G + L++TPTRELA Q+ + + + K + ++ IVGGM Q L +P +V+
Sbjct: 68 PYG-IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIA 126
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG--HFR-ELQSIIDMLP 369
TPGRL + + ++ + F V+DEADR++E G F +L++I+ +P
Sbjct: 127 TPGRLADHLRSSNTFSIK--KIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Score = 155 (59.6 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
EL L L++ +LG K+PTP+Q CIPA +G+ D +G A+TGSGKT AF LPI+Q+
Sbjct: 6 ELGLSSWLVEQCRQLGLKQPTPVQLGCIPAIL-EGR-DCLGCAKTGSGKTAAFVLPILQK 63
Query: 237 LLEE 240
L E+
Sbjct: 64 LSED 67
Score = 43 (20.2 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 8/11 (72%), Positives = 11/11 (100%)
Query: 395 KRQTLVFSATI 405
+RQTL+FSAT+
Sbjct: 179 RRQTLLFSATL 189
>UNIPROTKB|F1S7D9 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 CTD:54555 EMBL:CU640483
RefSeq:XP_003123587.1 UniGene:Ssc.79767 Ensembl:ENSSSCT00000025399
GeneID:100526038 KEGG:ssc:100526038 Uniprot:F1S7D9
Length = 483
Score = 166 (63.5 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 39/113 (34%), Positives = 65/113 (57%)
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
P G + L++TPTRELA Q+ + + + K + ++ IVGGM Q L +P +V+
Sbjct: 68 PYG-IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIA 126
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG--HFR-ELQSIIDMLP 369
TPGRL + + ++ + F V+DEADR++E G F +L++I+ +P
Sbjct: 127 TPGRLADHLRSSNTFSIK--KIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Score = 155 (59.6 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
EL L L++ +LG K+PTP+Q CIPA +G+ D +G A+TGSGKT AF LPI+Q+
Sbjct: 6 ELGLSSWLVEQCRQLGLKQPTPVQLGCIPAIL-EGR-DCLGCAKTGSGKTAAFVLPILQK 63
Query: 237 LLEE 240
L E+
Sbjct: 64 LSED 67
Score = 43 (20.2 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 8/11 (72%), Positives = 11/11 (100%)
Query: 395 KRQTLVFSATI 405
+RQTL+FSAT+
Sbjct: 179 RRQTLLFSATL 189
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 172 (65.6 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 40/89 (44%), Positives = 59/89 (66%)
Query: 159 EEELVSEAEISTEFD---AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
++E S E ++E+D ++ ++ L L+K+I LGFK+PTPIQKACIP GK DI
Sbjct: 163 QKEAESFFEDASEYDDNLSFQDMNLSRPLLKAITALGFKQPTPIQKACIPVGL-LGK-DI 220
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKA 244
A TG+GKT AF LP+++RL+ + +A
Sbjct: 221 CACAATGTGKTAAFILPVLERLIYKPRQA 249
Score = 160 (61.4 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 37/102 (36%), Positives = 61/102 (59%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R L++ PTREL +QV K++A+ +V VGG+ + QE L++ P++++ TPGRL
Sbjct: 253 RVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRSGPDILIATPGRL 312
Query: 325 WE-LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 365
+ L + HL + L +LDEADRM++ +++ II
Sbjct: 313 IDHLHNCPSFHLSSVEVL---ILDEADRMLDEYFEEQMKEII 351
Score = 40 (19.1 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 380 EQTQTCVTVSSLQRKKRQTLVFSATI 405
EQ + + + S + RQT++FSAT+
Sbjct: 345 EQMKEIIRLCS---RHRQTMLFSATM 367
Score = 39 (18.8 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
MQ+ + KA K LEE +EA A KG R+ TRE
Sbjct: 585 MQQSEAQINKAKKQLEEGKQEA---ATKGVERSWF--QTRE 620
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 276 (102.2 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 68/201 (33%), Positives = 116/201 (57%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
D +++L + ++M +I + PTP+QK IP + K D++ A+TGSGKT AF LP
Sbjct: 208 DRFHDLEMGEIIMGNINLSRYTRPTPVQKHAIPII--KSKRDLMACAQTGSGKTAAFLLP 265
Query: 233 IMQRLLEERE-KAGKMLEEKGEEAEKYAP-KGHLRALIITPTRELALQVTDHLKEVAKGI 290
++ ++ + +A + + +E KY K + +L++ PTRELALQ+ D ++ +
Sbjct: 266 VLSQIYTDGPGEALQAAKNSAQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRS 325
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+VR + GG +Q R L+ L+V TPGRL ++M G+ + L ++ VLDEAD
Sbjct: 326 HVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLLDMMERGK---IGLDYCNYLVLDEAD 382
Query: 351 RMIENGHFRELQSII--DMLP 369
RM++ G +++ I+ D +P
Sbjct: 383 RMLDMGFEPQIRRIVEQDTMP 403
Score = 37 (18.1 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 7/9 (77%), Positives = 9/9 (100%)
Query: 396 RQTLVFSAT 404
RQT++FSAT
Sbjct: 408 RQTMMFSAT 416
>UNIPROTKB|E2RBM7 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
OMA:EVRTVEQ GeneTree:ENSGT00670000098028 CTD:54555
EMBL:AAEX03012274 RefSeq:XP_541930.1 ProteinModelPortal:E2RBM7
Ensembl:ENSCAFT00000023054 GeneID:484814 KEGG:cfa:484814
NextBio:20858886 Uniprot:E2RBM7
Length = 488
Score = 166 (63.5 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 39/113 (34%), Positives = 65/113 (57%)
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
P G + L++TPTRELA Q+ + + + K + ++ IVGGM Q L +P +V+
Sbjct: 68 PYG-IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIA 126
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG--HFR-ELQSIIDMLP 369
TPGRL + + ++ + F V+DEADR++E G F +L++I+ +P
Sbjct: 127 TPGRLADHLRSSNTFSIK--KIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Score = 155 (59.6 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
EL L L++ +LG K+PTP+Q CIPA +G+ D +G A+TGSGKT AF LPI+Q+
Sbjct: 6 ELGLSSWLVEQCRQLGLKQPTPVQLGCIPAIL-EGR-DCLGCAKTGSGKTAAFVLPILQK 63
Query: 237 LLEE 240
L E+
Sbjct: 64 LSED 67
Score = 43 (20.2 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 8/11 (72%), Positives = 11/11 (100%)
Query: 395 KRQTLVFSATI 405
+RQTL+FSAT+
Sbjct: 179 RRQTLLFSATL 189
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 180 (68.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 50/179 (27%), Positives = 89/179 (49%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L AL++TPTRELA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGR
Sbjct: 119 LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGR 178
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
L + + + L L + V+DEADR++ E+ I+ ++P + + T+
Sbjct: 179 LIDHLENTKGF--NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTK 236
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFR--KKLKHGSLKLKQSVNGLNSIETLSERAG 440
+Q+ +R L A+S+ ++ +KL+ L + + L+E AG
Sbjct: 237 ------KVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAG 289
Score = 144 (55.7 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 38/91 (41%), Positives = 54/91 (59%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+ P + + V E E T + +L + +L ++ +LG+ +PT IQ IP A QG+
Sbjct: 34 DSPAEEPQPAVQEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 88
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
DIIG AETGSGKT AF LPI+ LLE ++
Sbjct: 89 -DIIGLAETGSGKTGAFALPILNALLETPQR 118
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 185 (70.2 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 41/107 (38%), Positives = 69/107 (64%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPG 322
++ L++ PTRELA QV ++ +A+GI NV+V+ + GG+ Q L+ ++VGTPG
Sbjct: 70 IQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAHIIVGTPG 129
Query: 323 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
R+ + + +++ ++L L+ VLDEADRM+E G +L +II+ P
Sbjct: 130 RIVDHL---DRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSP 173
Score = 125 (49.1 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
A++ L+L L++++ +G+ E TPIQ +PA G+ D+IG +TGSGKT AFGL +
Sbjct: 2 AFSTLKLKTELLENLSSMGYNEMTPIQAQSLPAIL-AGE-DVIGQGKTGSGKTAAFGLGL 59
Query: 234 MQRL 237
+ +L
Sbjct: 60 LNKL 63
Score = 49 (22.3 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 394 KKRQTLVFSATIALSAD-FRKKLKHGSLKLKQSV-NGLNSIE 433
++RQTL+FSAT K++ + + +K +V + N+IE
Sbjct: 174 RERQTLLFSATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIE 215
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 185 (70.2 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 41/107 (38%), Positives = 69/107 (64%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPG 322
++ L++ PTRELA QV ++ +A+GI NV+V+ + GG+ Q L+ ++VGTPG
Sbjct: 70 IQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAHIIVGTPG 129
Query: 323 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
R+ + + +++ ++L L+ VLDEADRM+E G +L +II+ P
Sbjct: 130 RIVDHL---DRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSP 173
Score = 125 (49.1 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
A++ L+L L++++ +G+ E TPIQ +PA G+ D+IG +TGSGKT AFGL +
Sbjct: 2 AFSTLKLKTELLENLSSMGYNEMTPIQAQSLPAIL-AGE-DVIGQGKTGSGKTAAFGLGL 59
Query: 234 MQRL 237
+ +L
Sbjct: 60 LNKL 63
Score = 49 (22.3 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 394 KKRQTLVFSATIALSAD-FRKKLKHGSLKLKQSV-NGLNSIE 433
++RQTL+FSAT K++ + + +K +V + N+IE
Sbjct: 174 RERQTLLFSATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIE 215
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 165 (63.1 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 38/87 (43%), Positives = 54/87 (62%)
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
D E +A E ++++ L L+K+I +GFK+PTPIQKAC+P GK DI
Sbjct: 185 DTTEGFFEDASQYDENLTFHDMNLSRPLLKAISTMGFKQPTPIQKACVPVGL-LGK-DIC 242
Query: 217 GAAETGSGKTLAFGLPIMQRLL-EERE 242
A TG+GKT AF LP+++RL+ + RE
Sbjct: 243 ACAATGTGKTAAFMLPVLERLIYKPRE 269
Score = 164 (62.8 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 35/103 (33%), Positives = 59/103 (57%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R L++ PTREL +QV +++A+ + VGG+ + QE L+A P++++ TPGRL
Sbjct: 274 RVLVLVPTRELGIQVHTVARQLAQFTTISTCLAVGGLDLKSQEAALRAGPDVLIATPGRL 333
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
+ + EL + +LDEADRM++ +++ II M
Sbjct: 334 IDHLHNTPSF--ELSQIEILILDEADRMLDEYFEEQMKEIIRM 374
Score = 44 (20.5 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 380 EQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSV 426
EQ + + + + QR QT++FSAT++ K L S+ LKQ V
Sbjct: 366 EQMKEIIRMCAYQR---QTMLFSATMSEEV---KDL--ASVSLKQPV 404
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 161 (61.7 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
F++++EL L P L+++ L + +PTPIQ IP A +G DIIG A+TGSGKT AF +
Sbjct: 80 FESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPAL-EGH-DIIGLAQTGSGKTAAFAI 137
Query: 232 PIMQRLLEERE 242
PI+ RL ++E
Sbjct: 138 PILNRLWHDQE 148
Score = 160 (61.4 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
A I+ PTRELA Q+ + + + VR IVGGM+ Q R L +P +++ TPGRL
Sbjct: 152 ACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLM 211
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ + + L L F V+DEADR+++ L I+ ++P
Sbjct: 212 DHLENTKGF--SLRKLKFLVMDEADRLLDMEFGPVLDRILKIIP 253
Score = 44 (20.5 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 394 KKRQTLVFSATIALSADFRKKLKHGSLK--LKQSV-NGLNSIETL 435
++R T +FSAT+ D KL+ SL +K +V N +++TL
Sbjct: 255 QERTTYLFSATMTSKID---KLQRASLTNPVKCAVSNKYQTVDTL 296
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 262 (97.3 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 76/218 (34%), Positives = 118/218 (54%)
Query: 157 DAEEELVS-EAEISTE-FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
DAE +L S E + + + E L + K++ G+ + TPIQ+ +P HQG D
Sbjct: 323 DAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLV-HQG-YD 380
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
I+ A+TGSGKT AF LPIM RL+++ L GE Y P R +I+TPTRE
Sbjct: 381 IMACAQTGSGKTAAFLLPIMTRLIDDNN-----LNTAGEGG-CY-P----RCIILTPTRE 429
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA Q+ + ++ A + + P+ GG++ + ++ ++VGT GR+ G
Sbjct: 430 LADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGT-- 487
Query: 335 LVELHTLSFFVLDEADRMIEN-GHFRELQSII--DMLP 369
++L FFVLDEADRMI+ G ++++I+ D +P
Sbjct: 488 -IKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMP 524
Score = 56 (24.8 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 377 GQSEQTQTCVTVSSLQRKK-RQTLVFSAT 404
G +T V S+ RK+ RQTL+FSAT
Sbjct: 509 GFGTDIETIVNYDSMPRKENRQTLMFSAT 537
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 262 (97.3 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 76/218 (34%), Positives = 118/218 (54%)
Query: 157 DAEEELVS-EAEISTE-FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
DAE +L S E + + + E L + K++ G+ + TPIQ+ +P HQG D
Sbjct: 323 DAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLV-HQG-YD 380
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
I+ A+TGSGKT AF LPIM RL+++ L GE Y P R +I+TPTRE
Sbjct: 381 IMACAQTGSGKTAAFLLPIMTRLIDDNN-----LNTAGEGG-CY-P----RCIILTPTRE 429
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA Q+ + ++ A + + P+ GG++ + ++ ++VGT GR+ G
Sbjct: 430 LADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGT-- 487
Query: 335 LVELHTLSFFVLDEADRMIEN-GHFRELQSII--DMLP 369
++L FFVLDEADRMI+ G ++++I+ D +P
Sbjct: 488 -IKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMP 524
Score = 56 (24.8 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 377 GQSEQTQTCVTVSSLQRKK-RQTLVFSAT 404
G +T V S+ RK+ RQTL+FSAT
Sbjct: 509 GFGTDIETIVNYDSMPRKENRQTLMFSAT 537
>SGD|S000004266 [details] [associations]
symbol:DBP9 "DEAD-box protein required for 27S rRNA
processing" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0033680 "ATP-dependent DNA/RNA helicase
activity" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000004266 GO:GO:0005524
GO:GO:0005730 EMBL:BK006945 GO:GO:0003723 GO:GO:0004003
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000463
GO:GO:0004004 GO:GO:0033680 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U17245 KO:K14810 HOGENOM:HOG000253015
OMA:TFLMSAT OrthoDB:EOG4DFSWQ EMBL:AY723847 PIR:S51412
RefSeq:NP_013378.1 ProteinModelPortal:Q06218 SMR:Q06218
DIP:DIP-4771N IntAct:Q06218 MINT:MINT-487200 STRING:Q06218
PaxDb:Q06218 PeptideAtlas:Q06218 EnsemblFungi:YLR276C GeneID:850982
KEGG:sce:YLR276C CYGD:YLR276c GeneTree:ENSGT00550000074946
NextBio:967498 Genevestigator:Q06218 GermOnline:YLR276C
Uniprot:Q06218
Length = 594
Score = 272 (100.8 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 79/216 (36%), Positives = 124/216 (57%)
Query: 159 EEELVSEAEI--STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
E++ V A I ST F+A++ L L+++I +GF+ PT IQ IP A Q K DII
Sbjct: 4 EKKSVEGAYIDDSTTFEAFH---LDSRLLQAIKNIGFQYPTLIQSHAIPLALQQ-KRDII 59
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 276
A TGSGKTLA+ +P+++ +LE ++ + GEE G L +I+ PTRELA
Sbjct: 60 AKAATGSGKTLAYLIPVIETILEYKKTI-----DNGEE------NGTL-GIILVPTRELA 107
Query: 277 LQVTDHLKEVAK--GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
QV + L+++ ++R + I MS LL +PE++VGTPG+L +L+ + +
Sbjct: 108 QQVYNVLEKLVLYCSKDIRTLNISSDMSDSVLSTLLMDQPEIIVGTPGKLLDLLQT-KIN 166
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
+ L+ L F V+DE D ++ G+ +L I + LP+
Sbjct: 167 SISLNELKFLVVDEVDLVLTFGYQDDLNKIGEYLPL 202
>CGD|CAL0003464 [details] [associations]
symbol:orf19.5991 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003464 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003
EMBL:AACQ01000004 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_723054.1
RefSeq:XP_723201.1 STRING:Q5ANB2 GeneID:3635229 GeneID:3635325
KEGG:cal:CaO19.13412 KEGG:cal:CaO19.5991 KO:K14808 Uniprot:Q5ANB2
Length = 908
Score = 187 (70.9 bits), Expect = 3.2e-21, Sum P(3) = 3.2e-21
Identities = 42/121 (34%), Positives = 68/121 (56%)
Query: 254 EAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKAR 313
E K G +RA+I++P+RELALQ +KE + G N++ + ++GG S E+ + +
Sbjct: 159 ERLKSRQPGGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFSKMMTK 218
Query: 314 PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 373
P+++V TPGR L + +L T+ + V DEADR+ E G +L ++ LP
Sbjct: 219 PDIIVCTPGRFLHLKVEMQ---YDLMTVQYIVFDEADRLFEMGFAEQLNELLASLPSNRQ 275
Query: 374 S 374
S
Sbjct: 276 S 276
Score = 138 (53.6 bits), Expect = 3.2e-21, Sum P(3) = 3.2e-21
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
L ++ +I + G+K+PTPIQ+ IP +G+ D++G A TGSGKT AF LP+++RL +
Sbjct: 106 LTKFILANIAKKGYKQPTPIQRKTIPLIM-EGR-DVVGMARTGSGKTAAFVLPLIERL-K 162
Query: 240 EREKAG 245
R+ G
Sbjct: 163 SRQPGG 168
Score = 45 (20.9 bits), Expect = 3.2e-21, Sum P(3) = 3.2e-21
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 396 RQTLVFSATIALS-ADFRK 413
RQ+L+FSAT+ S DF K
Sbjct: 274 RQSLLFSATLPRSLVDFAK 292
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 181 (68.8 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 50/179 (27%), Positives = 89/179 (49%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L AL++TPTRELA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGR
Sbjct: 95 LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGR 154
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
L + + + L L + V+DEADR++ E+ I+ ++P + + T+
Sbjct: 155 LIDHLENTKGF--NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTK 212
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFR--KKLKHGSLKLKQSVNGLNSIETLSERAG 440
+Q+ +R L A+S+ ++ +KL+ L + + L+E AG
Sbjct: 213 ------KVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAG 265
Score = 138 (53.6 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 34/73 (46%), Positives = 47/73 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E + +L + +L ++ +LG+ +PT IQ IP A QG+ DIIG AETGSGKT AF
Sbjct: 24 ETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR-DIIGLAETGSGKTGAFA 81
Query: 231 LPIMQRLLEEREK 243
LPI+ LLE ++
Sbjct: 82 LPILNALLETPQR 94
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 194 (73.4 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 45/116 (38%), Positives = 70/116 (60%)
Query: 256 EKYAPKGH-LRALIITPTRELALQVTDHLKEV-AKGINVRVVPIVGGMSTEKQERLLKAR 313
EK P+ ++ALI+ PTRELALQ+T +K++ + ++ V+ I GG +Q R LK
Sbjct: 65 EKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGN 124
Query: 314 PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+VV TPGRL + + + ++L LS VLDEAD+M+ G +++ I+D P
Sbjct: 125 THIVVATPGRLLDHI---RRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETP 177
Score = 119 (46.9 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
EL + ++ G E TPIQ+ IP GK DIIG A+TG+GKTLAF LPI+++
Sbjct: 9 ELGISETFNHTLRENGITEATPIQEKAIPVIL-SGK-DIIGQAKTGTGKTLAFVLPILEK 66
Query: 237 L 237
+
Sbjct: 67 I 67
Score = 44 (20.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKA 312
A+I T+ A ++ D+LK G+ + G + K+ER++K+
Sbjct: 247 AVIFCRTKVRASKLYDNLK----GLGYNCAELHGDIPQAKRERVMKS 289
Score = 40 (19.1 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 396 RQTLVFSATIALSADFRKKLK 416
+QT++FSATI D +K K
Sbjct: 180 KQTMLFSATIP--KDIKKLAK 198
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 194 (73.4 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 45/116 (38%), Positives = 70/116 (60%)
Query: 256 EKYAPKGH-LRALIITPTRELALQVTDHLKEV-AKGINVRVVPIVGGMSTEKQERLLKAR 313
EK P+ ++ALI+ PTRELALQ+T +K++ + ++ V+ I GG +Q R LK
Sbjct: 65 EKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGN 124
Query: 314 PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+VV TPGRL + + + ++L LS VLDEAD+M+ G +++ I+D P
Sbjct: 125 THIVVATPGRLLDHI---RRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETP 177
Score = 119 (46.9 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
EL + ++ G E TPIQ+ IP GK DIIG A+TG+GKTLAF LPI+++
Sbjct: 9 ELGISETFNHTLRENGITEATPIQEKAIPVIL-SGK-DIIGQAKTGTGKTLAFVLPILEK 66
Query: 237 L 237
+
Sbjct: 67 I 67
Score = 44 (20.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKA 312
A+I T+ A ++ D+LK G+ + G + K+ER++K+
Sbjct: 247 AVIFCRTKVRASKLYDNLK----GLGYNCAELHGDIPQAKRERVMKS 289
Score = 40 (19.1 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 396 RQTLVFSATIALSADFRKKLK 416
+QT++FSATI D +K K
Sbjct: 180 KQTMLFSATIP--KDIKKLAK 198
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 189 (71.6 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 36/107 (33%), Positives = 66/107 (61%)
Query: 263 HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPG 322
H++AL++ PTRELA Q+ + + + +NV ++P +GG S +R L+A +VVGTPG
Sbjct: 97 HVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPG 156
Query: 323 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
R+ ++++ ++ ++ + FVLDEAD M+ G ++ + +P
Sbjct: 157 RVGDMIN---RNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMP 200
Score = 126 (49.4 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 33/97 (34%), Positives = 56/97 (57%)
Query: 145 VEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQK-AC 203
V+ V VS+ D + L+ E ++++++ L L++ IY GF++P+ IQK A
Sbjct: 4 VKNDVNVSSVVD--ADGLI-EGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAI 60
Query: 204 IPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEE 240
+P GK D+I A++G+GKT F + I+QR+ E
Sbjct: 61 VPCTT--GK-DVIAQAQSGTGKTATFSVSILQRIDHE 94
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 263 (97.6 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 74/234 (31%), Positives = 127/234 (54%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEP-TPIQKACIP 205
+S + N P ++ +S+ I + ++ L P++ S K+ P+ P
Sbjct: 37 QSPALDNVPQTEIDKFLSDHSIKITDASADKPSLRPIISFSFLPPSNKDLYAPLDGFASP 96
Query: 206 AAAHQ--------GKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEK 257
A G+ D+IG AETGSGKTLAFGLP ++++L+ L+ K +
Sbjct: 97 TAIQSATWPLLFAGR-DVIGIAETGSGKTLAFGLPCLKKVLD--------LKTKQKSCRP 147
Query: 258 YAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELV 317
A ++I+PTRELA+Q+ D L + A+ ++++V I GG+ ++Q LK+ +V
Sbjct: 148 LA-------VVISPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQREALKSAA-VV 199
Query: 318 VGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 371
V TPGRL +L + G ++L + + VLDEADRM++ G ++++ II +P++
Sbjct: 200 VATPGRLKDLQNDGS---LDLGRVKYLVLDEADRMLDKGFEQDIKDIISPMPVS 250
Score = 42 (19.8 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 388 VSSLQRKKRQTLVFSAT 404
+S + KRQT++F+AT
Sbjct: 244 ISPMPVSKRQTVMFTAT 260
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 272 (100.8 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 69/217 (31%), Positives = 120/217 (55%)
Query: 157 DAEEELVSEA---EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKV 213
D E++ EA + ++++++L ++ ++ + +PTP+QK IP + G+
Sbjct: 276 DKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIIN-GR- 333
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D++ A+TGSGKT AF +PI+ ++ E + ++Y P G L++ PTR
Sbjct: 334 DLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQY-PLG----LVLAPTR 388
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELA Q+ + K+ A +R + GG +T +Q R L L+V TPGRL ++++ G+
Sbjct: 389 ELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGK- 447
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
V L + F VLDEADRM++ G +++ I++ L M
Sbjct: 448 --VGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNM 482
Score = 40 (19.1 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 395 KRQTLVFSAT 404
+RQTL+FSAT
Sbjct: 487 QRQTLMFSAT 496
>DICTYBASE|DDB_G0270396 [details] [associations]
symbol:ddx49 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0270396 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:FRNLCAI
RefSeq:XP_646762.1 HSSP:P60842 ProteinModelPortal:Q55BR9
PRIDE:Q55BR9 EnsemblProtists:DDB0234206 GeneID:8617735
KEGG:ddi:DDB_G0270396 ProtClustDB:CLSZ2846935 Uniprot:Q55BR9
Length = 508
Score = 188 (71.2 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 40/104 (38%), Positives = 61/104 (58%)
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
A+I+TPTRELA+Q+ + + +NV ++GG+ Q +L RP ++V TPGRL
Sbjct: 75 AVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPHIIVATPGRLA 134
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
++ G K + L F VLDEADR++ E+ SI++ LP
Sbjct: 135 SHLNNGLK--IALKFCKFLVLDEADRLLGEDFELEIASILEHLP 176
Score = 122 (48.0 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L L+ + +LGFK P+ IQ IP +G+ DII +A+TGSGKT +F +PI+
Sbjct: 6 FEELGLTTWLVANCKQLGFKAPSNIQANTIPEIL-KGR-DIIASAKTGSGKTASFAIPIL 63
Query: 235 QRLLEE 240
+L E+
Sbjct: 64 NQLSED 69
Score = 46 (21.3 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 9/12 (75%), Positives = 12/12 (100%)
Query: 394 KKRQTLVFSATI 405
+KRQTL+FSAT+
Sbjct: 179 EKRQTLLFSATM 190
>MGI|MGI:2136689 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2136689 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 HOVERGEN:HBG100512 CTD:54555
OrthoDB:EOG4C87SC EMBL:BC099554 IPI:IPI00354271
RefSeq:NP_001020093.2 UniGene:Mm.388127 UniGene:Mm.440659
ProteinModelPortal:Q4FZF3 SMR:Q4FZF3 PhosphoSite:Q4FZF3
PRIDE:Q4FZF3 Ensembl:ENSMUST00000008004 GeneID:234374
KEGG:mmu:234374 UCSC:uc009lzu.1 InParanoid:Q4FZF3 NextBio:382139
Bgee:Q4FZF3 CleanEx:MM_DDX49 Genevestigator:Q4FZF3
GermOnline:ENSMUSG00000057788 Uniprot:Q4FZF3
Length = 480
Score = 167 (63.8 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 39/113 (34%), Positives = 65/113 (57%)
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
P G + L++TPTRELA Q+ + + + K + ++ IVGGM Q L +P +V+
Sbjct: 68 PYG-IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIA 126
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG--HFR-ELQSIIDMLP 369
TPGRL + + + + + F V+DEADR++E G F +L++I+ +P
Sbjct: 127 TPGRLADHLRSS--NTFNMKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVP 177
Score = 153 (58.9 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
E+ L L++ +LG K+PTP+Q CIPA +G+ D +G A+TGSGKT AF LPI+Q+
Sbjct: 6 EIGLSSWLVEQCRQLGLKQPTPVQLGCIPAIL-EGR-DCLGCAKTGSGKTAAFVLPILQK 63
Query: 237 LLEE 240
L E+
Sbjct: 64 LSED 67
Score = 49 (22.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 376 EGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+G ++ T T+ + +RQTL+FSAT+
Sbjct: 160 QGCTDFTTDLETILAAVPARRQTLLFSATL 189
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 172 (65.6 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 50/204 (24%), Positives = 103/204 (50%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R+L++ PTRELA QV ++ K + + ++GG+S ++Q+ L+ ++++ TPGRL
Sbjct: 75 RSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDALIDRGVDVLIATPGRL 134
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS---NEGQSEQ 381
+ G+ L + + V+DEADRM++ G +++ I + P T + + + +
Sbjct: 135 LDHFERGKLLLTGVQIM---VVDEADRMLDMGFIPDIERIFSLTPFTRQTLFFSATMAPE 191
Query: 382 TQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGM 441
+ +T + L R + AT + + + L GS + +++ + L + G
Sbjct: 192 IER-ITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKRAVLRALIDAEGE 250
Query: 442 RANVAIVDL---TNVSVLANKLEE 462
+ AI+ T+V ++A L++
Sbjct: 251 KCTNAIIFCNRKTDVDIVAKSLQK 274
Score = 147 (56.8 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L+P ++K+I G++ PTPIQ IP A +G+ D++G A+TG+GKT +F LP++
Sbjct: 4 FSELNLNPKVLKAIEEAGYETPTPIQAGAIPPAL-EGR-DVLGIAQTGTGKTASFTLPMI 61
Query: 235 QRLLEEREKA 244
L R +A
Sbjct: 62 TLLARGRARA 71
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 258 (95.9 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 74/222 (33%), Positives = 119/222 (53%)
Query: 157 DAEEELVSEAE-ISTEF-DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
DAE ++ S+ + + + ++E L + K++ G+ + TPIQ+ +P HQG D
Sbjct: 534 DAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLI-HQGH-D 591
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
I+ A+TGSGKT AF LPIM RL++E + L GE Y P R +I+TPTRE
Sbjct: 592 IMACAQTGSGKTAAFLLPIMARLIDEND-----LNTAGEGG-CY-P----RCIILTPTRE 640
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
L Q+ + ++ A + + P+ GG++ + ++ ++VGT GR+ G
Sbjct: 641 LTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGT-- 698
Query: 335 LVELHTLSFFVLDEADRMIEN-GHFRELQSIIDMLPMTNGSN 375
++L FFVLDEADRMI+ G ++ +I++ M N
Sbjct: 699 -IKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKEN 739
Score = 59 (25.8 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 377 GQSEQTQTCVTVSSLQRKK-RQTLVFSATIALSAD--FRKKLKHGSLKL 422
G T V S+ +K+ RQTL+FSAT S R LK G + L
Sbjct: 720 GFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIML 768
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 258 (95.9 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 74/222 (33%), Positives = 119/222 (53%)
Query: 157 DAEEELVSEAE-ISTEF-DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
DAE ++ S+ + + + ++E L + K++ G+ + TPIQ+ +P HQG D
Sbjct: 534 DAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLI-HQGH-D 591
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
I+ A+TGSGKT AF LPIM RL++E + L GE Y P R +I+TPTRE
Sbjct: 592 IMACAQTGSGKTAAFLLPIMARLIDEND-----LNTAGEGG-CY-P----RCIILTPTRE 640
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
L Q+ + ++ A + + P+ GG++ + ++ ++VGT GR+ G
Sbjct: 641 LTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGT-- 698
Query: 335 LVELHTLSFFVLDEADRMIEN-GHFRELQSIIDMLPMTNGSN 375
++L FFVLDEADRMI+ G ++ +I++ M N
Sbjct: 699 -IKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKEN 739
Score = 59 (25.8 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 377 GQSEQTQTCVTVSSLQRKK-RQTLVFSATIALSAD--FRKKLKHGSLKL 422
G T V S+ +K+ RQTL+FSAT S R LK G + L
Sbjct: 720 GFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIML 768
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 270 (100.1 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 68/215 (31%), Positives = 119/215 (55%)
Query: 157 DAEEELVSEA---EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKV 213
D EE+ EA ++ +++L LH + ++I G+ PTP+QK IPA QG
Sbjct: 212 DKYEEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPAL--QGGR 269
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKA-GKMLEEKGEEAEKYAPKGHLRALIITPT 272
D++ A+TGSGKT AF +P++ +L++ A + + G ++Y P AL+++PT
Sbjct: 270 DLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQY-PS----ALVLSPT 324
Query: 273 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQE-RLLKARPELVVGTPGRLWELMSGG 331
REL+LQ+ + ++ A + + GG K + L+ +++ TPGRL ++M G
Sbjct: 325 RELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQG 384
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
L+ + + VLDEADRM++ G +++ I++
Sbjct: 385 ---LIGMEGCRYLVLDEADRMLDMGFEPQIRQIVE 416
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 183 (69.5 bits), Expect = 8.1e-21, Sum P(3) = 8.1e-21
Identities = 43/111 (38%), Positives = 68/111 (61%)
Query: 261 KGHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVG 319
K +++++I PTRELA QV L+++A+GI N++++ + GG Q L+ ++VG
Sbjct: 76 KFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLEHGAHVIVG 135
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
TPGRL E + G ++L L+ VLDEADRM+E G L +I+ P+
Sbjct: 136 TPGRLEEHVIKGT---LQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPL 183
Score = 131 (51.2 bits), Expect = 8.1e-21, Sum P(3) = 8.1e-21
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
A++ L L L+K++ LG+++ TPIQ +P +GK D+IG A+TGSGKT AFGL +
Sbjct: 11 AFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELL-KGK-DVIGEAKTGSGKTAAFGLAL 68
Query: 234 MQRL 237
+ +L
Sbjct: 69 LNKL 72
Score = 39 (18.8 bits), Expect = 8.1e-21, Sum P(3) = 8.1e-21
Identities = 8/9 (88%), Positives = 9/9 (100%)
Query: 396 RQTLVFSAT 404
RQTL+FSAT
Sbjct: 185 RQTLLFSAT 193
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 183 (69.5 bits), Expect = 8.1e-21, Sum P(3) = 8.1e-21
Identities = 43/111 (38%), Positives = 68/111 (61%)
Query: 261 KGHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVG 319
K +++++I PTRELA QV L+++A+GI N++++ + GG Q L+ ++VG
Sbjct: 76 KFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLEHGAHVIVG 135
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
TPGRL E + G ++L L+ VLDEADRM+E G L +I+ P+
Sbjct: 136 TPGRLEEHVIKGT---LQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPL 183
Score = 131 (51.2 bits), Expect = 8.1e-21, Sum P(3) = 8.1e-21
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
A++ L L L+K++ LG+++ TPIQ +P +GK D+IG A+TGSGKT AFGL +
Sbjct: 11 AFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELL-KGK-DVIGEAKTGSGKTAAFGLAL 68
Query: 234 MQRL 237
+ +L
Sbjct: 69 LNKL 72
Score = 39 (18.8 bits), Expect = 8.1e-21, Sum P(3) = 8.1e-21
Identities = 8/9 (88%), Positives = 9/9 (100%)
Query: 396 RQTLVFSAT 404
RQTL+FSAT
Sbjct: 185 RQTLLFSAT 193
>UNIPROTKB|F6UN21 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
IPI:IPI00642800 SMR:F6UN21 Ensembl:ENST00000416969
Ensembl:ENST00000419338 Ensembl:ENST00000420958
Ensembl:ENST00000436919 Ensembl:ENST00000436995
Ensembl:ENST00000446909 Ensembl:ENST00000449863 Uniprot:F6UN21
Length = 236
Score = 170 (64.9 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 43/111 (38%), Positives = 63/111 (56%)
Query: 262 GHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKAR-PELVVG 319
G + L++ TRELA Q++ + +K + NV+V GG+S +K E +LK P +VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR-ELQSIIDMLP 369
TPGR+ L K L L + F+LDE D+M+E R ++Q I M P
Sbjct: 172 TPGRILALARN--KSL-NLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTP 219
Score = 116 (45.9 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 30/95 (31%), Positives = 52/95 (54%)
Query: 146 EESVTVSNGPDDAE---EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
++ V + G D AE ++ V + +S + + L P L+++I GF+ P+ +Q
Sbjct: 15 DDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 203 CIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
CIP A G +D++ A++G GKT F L +Q+L
Sbjct: 75 CIPQAI-LG-MDVLCQAKSGMGKTAVFVLATLQQL 107
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 182 (69.1 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 45/111 (40%), Positives = 62/111 (55%)
Query: 261 KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGT 320
K LRAL++TPTRELA QV + +V + GG+ST+KQ LK ++++ T
Sbjct: 74 KPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVGVDILIAT 133
Query: 321 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 371
PGRL +L+ L + TL F DEADRM++ G E+ I LP T
Sbjct: 134 PGRLLDLLRTESVSLSNIETLVF---DEADRMLDMGFKEEIDQITQYLPKT 181
Score = 124 (48.7 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++ L L+K+I + EPT IQK IP K D++ A+TG+GKT AF LPI+
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLIL--AKHDVMARAQTGTGKTAAFALPIL 64
Query: 235 QRLL 238
Q+L+
Sbjct: 65 QQLI 68
Score = 44 (20.5 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 9/13 (69%), Positives = 11/13 (84%)
Query: 394 KKRQTLVFSATIA 406
K +QTL+FSAT A
Sbjct: 180 KTKQTLLFSATFA 192
Score = 38 (18.4 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 393 RKKRQTLVFSATIALSADFRKKLKHGSLK 421
R +Q LVF+ T + D K++ +K
Sbjct: 244 RNWKQVLVFTRTKQCADDLAKEMTKDGVK 272
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 182 (69.1 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 45/111 (40%), Positives = 62/111 (55%)
Query: 261 KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGT 320
K LRAL++TPTRELA QV + +V + GG+ST+KQ LK ++++ T
Sbjct: 74 KPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVGVDILIAT 133
Query: 321 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 371
PGRL +L+ L + TL F DEADRM++ G E+ I LP T
Sbjct: 134 PGRLLDLLRTESVSLSNIETLVF---DEADRMLDMGFKEEIDQITQYLPKT 181
Score = 124 (48.7 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++ L L+K+I + EPT IQK IP K D++ A+TG+GKT AF LPI+
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLIL--AKHDVMARAQTGTGKTAAFALPIL 64
Query: 235 QRLL 238
Q+L+
Sbjct: 65 QQLI 68
Score = 44 (20.5 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 9/13 (69%), Positives = 11/13 (84%)
Query: 394 KKRQTLVFSATIA 406
K +QTL+FSAT A
Sbjct: 180 KTKQTLLFSATFA 192
Score = 38 (18.4 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 393 RKKRQTLVFSATIALSADFRKKLKHGSLK 421
R +Q LVF+ T + D K++ +K
Sbjct: 244 RNWKQVLVFTRTKQCADDLAKEMTKDGVK 272
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 169 (64.5 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 43/146 (29%), Positives = 79/146 (54%)
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
A+++ PTRELA Q+++ + + I VR V IVGGM Q L +P ++V TPGRL
Sbjct: 117 AVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLM 176
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTC 385
+ + + L L + ++DEADR+++ + I+ ++P +E ++
Sbjct: 177 DHLENTKGF--SLKNLKYLIMDEADRLLDMDFGPIIDKILKIIP-----HERRTLLFSAT 229
Query: 386 VTVSSLQRKKRQTLVFSATIALSADF 411
+T S +++ +R +L +A+S+ F
Sbjct: 230 MT-SKVEKLQRASLHQPVRVAVSSKF 254
Score = 147 (56.8 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 144 TVEESVTVSNGPDD-AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
++ + + SN + + E +++ + + EL + L ++ +LGFK PTPIQ+
Sbjct: 16 SLNKKIETSNSSSEKSSENNNGDSQNNEAPKTFKELGVIDELCEACEKLGFKTPTPIQQE 75
Query: 203 CIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
IP + K D+IG A+TGSGKT AF LP++Q L
Sbjct: 76 AIPVVLN--KRDVIGLAQTGSGKTAAFALPVIQEL 108
>WB|WBGene00022148 [details] [associations]
symbol:Y71G12B.8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:FO080942 RefSeq:NP_490891.2
ProteinModelPortal:Q95XM9 SMR:Q95XM9 PaxDb:Q95XM9
EnsemblMetazoa:Y71G12B.8 GeneID:171743 KEGG:cel:CELE_Y71G12B.8
UCSC:Y71G12B.8 CTD:171743 WormBase:Y71G12B.8 InParanoid:Q95XM9
OMA:ETDREAM NextBio:872509 Uniprot:Q95XM9
Length = 739
Score = 175 (66.7 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 43/140 (30%), Positives = 72/140 (51%)
Query: 258 YAPKGH--LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPE 315
Y PKG R L++ PTRELA+QV ++++ I + V GG+ + QE L++ P+
Sbjct: 212 YRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPD 271
Query: 316 LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 375
+VV TPGRL + + L + VLDEADRM+E ++ +I + +
Sbjct: 272 VVVATPGRLIDHLHNSPSF--NLSNIEVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTL 329
Query: 376 EGQSEQTQTCVTVSSLQRKK 395
+ T+ ++S+ +K
Sbjct: 330 LFSATMTEEIDELASMSLQK 349
Score = 146 (56.5 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 156 DDAEEELVSEAEISTEFD-AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
+D L+ + T + ++ ++ L ++K+ G+ +PTPIQ+ACIP A GK D
Sbjct: 130 EDFFSALIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVAL-TGK-D 187
Query: 215 IIGAAETGSGKTLAFGLPIMQRLL 238
I A TG+GKT AF LPI++R++
Sbjct: 188 ICACAATGTGKTAAFVLPILERMI 211
Score = 43 (20.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 394 KKRQTLVFSATIALSAD 410
+ RQTL+FSAT+ D
Sbjct: 324 QNRQTLLFSATMTEEID 340
>UNIPROTKB|F6TRA5 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
IPI:IPI00796920 SMR:F6TRA5 Ensembl:ENST00000428098
Ensembl:ENST00000438301 Ensembl:ENST00000438433
Ensembl:ENST00000444726 Ensembl:ENST00000446272
Ensembl:ENST00000449100 Ensembl:ENST00000455645 Uniprot:F6TRA5
Length = 238
Score = 170 (64.9 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 43/111 (38%), Positives = 63/111 (56%)
Query: 262 GHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKAR-PELVVG 319
G + L++ TRELA Q++ + +K + NV+V GG+S +K E +LK P +VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR-ELQSIIDMLP 369
TPGR+ L K L L + F+LDE D+M+E R ++Q I M P
Sbjct: 172 TPGRILALARN--KSL-NLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTP 219
Score = 116 (45.9 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 30/95 (31%), Positives = 52/95 (54%)
Query: 146 EESVTVSNGPDDAE---EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
++ V + G D AE ++ V + +S + + L P L+++I GF+ P+ +Q
Sbjct: 15 DDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 203 CIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
CIP A G +D++ A++G GKT F L +Q+L
Sbjct: 75 CIPQAI-LG-MDVLCQAKSGMGKTAVFVLATLQQL 107
>UNIPROTKB|E1C187 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
Uniprot:E1C187
Length = 759
Score = 163 (62.4 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 159 EEELVSEAEISTEFD---AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
++E S E ++E+D ++ ++ L L+K+I LGFK+PTPIQKACIP GK DI
Sbjct: 163 QKEAESFFEDASEYDDNLSFQDMNLSRPLLKAITALGFKQPTPIQKACIPVGL-LGK-DI 220
Query: 216 IGAAETGS-GKTLAFGLPIMQRLLEEREKA 244
A TG+ GKT AF LP+++RL+ + +A
Sbjct: 221 CACAATGTVGKTAAFILPVLERLIYKPRQA 250
Score = 160 (61.4 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 37/102 (36%), Positives = 61/102 (59%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R L++ PTREL +QV K++A+ +V VGG+ + QE L++ P++++ TPGRL
Sbjct: 254 RVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRSGPDILIATPGRL 313
Query: 325 WE-LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 365
+ L + HL + L +LDEADRM++ +++ II
Sbjct: 314 IDHLHNCPSFHLSSVEVL---ILDEADRMLDEYFEEQMKEII 352
Score = 40 (19.1 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 380 EQTQTCVTVSSLQRKKRQTLVFSATI 405
EQ + + + S + RQT++FSAT+
Sbjct: 346 EQMKEIIRLCS---RHRQTMLFSATM 368
Score = 39 (18.8 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
MQ+ + KA K LEE +EA A KG R+ TRE
Sbjct: 586 MQQSEAQINKAKKQLEEGKQEA---ATKGVERSWF--QTRE 621
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 266 (98.7 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 69/217 (31%), Positives = 119/217 (54%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
DD E + + ++++ + ++M +I + PTP+QK IP +GK D+
Sbjct: 159 DDIPVEATG-SNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPII--KGKRDL 215
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
+ A+TGSGKT AF LPI+ ++ + +A K ++E G + K + +L++ PTRE
Sbjct: 216 MACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRR---KQYPISLVLAPTRE 272
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA+Q+ + ++ + VR + GG +Q R L+ L+V TPGRL ++M G+
Sbjct: 273 LAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-- 330
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSII--DMLP 369
+ L + VLDEADRM++ G +++ I+ D +P
Sbjct: 331 -IGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMP 366
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 266 (98.7 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 66/198 (33%), Positives = 113/198 (57%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++++ + ++M +I + PTP+QK IP K D++ A+TGSGKT AF LPI+
Sbjct: 181 FSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDLMACAQTGSGKTAAFLLPIL 238
Query: 235 QRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
++ + +A K ++E G + K + +L++ PTRELA+Q+ + ++ + VR
Sbjct: 239 SQIYTDGPGEALKAMKENGRYGRR---KQYPISLVLAPTRELAVQIYEEARKFSYRSRVR 295
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG T +Q R L+ L+V TPGRL ++M G+ + L + VLDEADRM+
Sbjct: 296 PCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDFCKYLVLDEADRML 352
Query: 354 ENGHFRELQSII--DMLP 369
+ G +++ I+ D +P
Sbjct: 353 DMGFEPQIRRIVEQDTMP 370
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 266 (98.7 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 69/217 (31%), Positives = 119/217 (54%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
DD E + + ++++ + ++M +I + PTP+QK IP +GK D+
Sbjct: 162 DDIPVEATG-SNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPII--KGKRDL 218
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
+ A+TGSGKT AF LPI+ ++ + +A K ++E G + K + +L++ PTRE
Sbjct: 219 MACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRR---KQYPISLVLAPTRE 275
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA+Q+ + ++ + VR + GG +Q R L+ L+V TPGRL ++M G+
Sbjct: 276 LAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-- 333
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSII--DMLP 369
+ L + VLDEADRM++ G +++ I+ D +P
Sbjct: 334 -IGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMP 369
>UNIPROTKB|G5EHR3 [details] [associations]
symbol:MGCH7_ch7g509 "ATP-dependent RNA helicase DED1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
EMBL:CM001237 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 RefSeq:XP_003720990.1 ProteinModelPortal:G5EHR3
EnsemblFungi:MGG_02762T0 GeneID:2682767 KEGG:mgr:MGG_02762
Uniprot:G5EHR3
Length = 619
Score = 259 (96.2 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 67/210 (31%), Positives = 112/210 (53%)
Query: 159 EEELVSEAEISTEFDA-WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIG 217
E +V E + E + + LHP ++K++ G+K PTPIQ CIPA H+G D+IG
Sbjct: 107 EIAVVQEGPVRVEPALRFEDAGLHPAMLKNVDLCGYKVPTPIQAYCIPAI-HKGH-DVIG 164
Query: 218 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGE-EAEKYAP-KGHLRALIITPTREL 275
A+TGSGKT AF +P++ +L+ + +K E + + P + +I+ PTREL
Sbjct: 165 IAQTGSGKTAAFLIPVINKLMGKAKKLAAPRPNPVEYNMDIHGPVRAEPLVVIVCPTREL 224
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
A+Q + +++ +R + GG + Q R + +++ TPGRL M E L
Sbjct: 225 AIQAFNEARKLCYRSMLRPGVVYGGGNFMDQIRQIGLGCDILCATPGRLLHFMDKPE--L 282
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSII 365
+ L + + V+DEAD M+ +++ I+
Sbjct: 283 LNLQRVRYVVIDEADEMLTADWEEDMKKIM 312
Score = 46 (21.3 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 399 LVFSATIALSA-DF-RKKLKHGSLKLKQSVNGL---NSIETLSERAGMRANVAIVDLTN 452
L+FSAT D R+ L ++L+ G N I+T+ E A M A+ DL N
Sbjct: 324 LLFSATFPKKIRDLAREHLSEDHVQLRVGRAGSTHSNIIQTVIETAPMNKKRALNDLIN 382
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 256 (95.2 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 69/203 (33%), Positives = 113/203 (55%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
VS + + E +L L +I R G+ +PTP+QK +P + G+ D++ A+TG
Sbjct: 171 VSGTNLPAAIMTFEEAKLCESLENNISRSGYVKPTPVQKYGLPIIS-AGR-DLMACAQTG 228
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 282
SGKT AF LPI+Q+L+ + A + E +E E A+I+ PTREL Q+
Sbjct: 229 SGKTAAFLLPILQQLMADGVAASRFSEI--QEPE---------AVIVAPTRELINQIYQE 277
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
++ + G VR V + GG++T Q R ++ ++ GTPGRL +++ G+ V L +
Sbjct: 278 ARKFSFGTCVRPVVVYGGVNTGYQMREIEKGCNVLCGTPGRLLDMIGRGK---VGLSKVR 334
Query: 343 FFVLDEADRMIENGHFRELQSII 365
VLDEADRM++ G +++ ++
Sbjct: 335 HLVLDEADRMLDMGFEPDMRRLV 357
Score = 49 (22.3 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 393 RKKRQTLVFSATIA-----LSADFRK 413
+++RQTL+FSAT L+ADF K
Sbjct: 365 KEERQTLMFSATFPEDIQRLAADFLK 390
>UNIPROTKB|O05855 [details] [associations]
symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
Uniprot:O05855
Length = 527
Score = 263 (97.6 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 96/312 (30%), Positives = 144/312 (46%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
+TE + +L + +++++ G K P IQ+ +P A G+ D+IG A TG GKT A
Sbjct: 7 TTE-STFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLAL-DGE-DVIGQARTGMGKTFA 63
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 288
FG+P++QR+ +G G AP RAL++ PTREL LQVTD L K
Sbjct: 64 FGVPLLQRIT-----SGD-----GTRPLTGAP----RALVVVPTRELCLQVTDDLATAGK 109
Query: 289 GIN----------VR----VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
+ VR VV I GG E Q L+A ++VVGTPGRL +L G H
Sbjct: 110 YLTAGPDTDDAAAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQG--H 167
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 394
L +L LS VLDEAD M++ G +++ I+ +P S + +T++
Sbjct: 168 L-QLGGLSVLVLDEADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLA----- 221
Query: 395 KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVS 454
R +V I A + + + + L+ +E +S R A + T
Sbjct: 222 -RTFMVRPTHIRAEAPHSSAVHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTK 280
Query: 455 VLANKLEESFIE 466
A K+ + E
Sbjct: 281 RTAQKVADELTE 292
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 179 (68.1 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 38/109 (34%), Positives = 66/109 (60%)
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
P+G +R L++ PTRELA Q+ + + + + +R I GG++ ++Q R L++ ++VV
Sbjct: 67 PRGRVRTLVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVDVVVA 126
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
PGRL + + G + + TL ++DEADRM + G ++QSI+ L
Sbjct: 127 CPGRLLDHIWRGTIDICGVETL---IIDEADRMFDMGFQPDIQSILKCL 172
Score = 135 (52.6 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
F+++N P +M + G++EPTPIQ IP +G D+IG A+TG+GKT A+ L
Sbjct: 3 FESFN---FAPAVMAGVRACGYQEPTPIQAQAIPPIL-EGH-DVIGLAQTGTGKTAAYAL 57
Query: 232 PIMQRLL 238
P++Q++L
Sbjct: 58 PVIQKML 64
>UNIPROTKB|J3KS25 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000585024
Uniprot:J3KS25
Length = 188
Score = 141 (54.7 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 31/86 (36%), Positives = 54/86 (62%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQ-KACIPAAAHQG 211
NGPD E E V E+ + D+++++ L L++ IY GF++P+ IQ +A +P +G
Sbjct: 10 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCI--KG 67
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRL 237
D+I A++G+GKT F + I+Q++
Sbjct: 68 -YDVIAQAQSGTGKTATFAISILQQI 92
Score = 128 (50.1 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 28/90 (31%), Positives = 53/90 (58%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ-ERLLKARPELVVGTPGR 323
+AL++ PTRELA Q+ + + + +GG + + ++L P ++VGTPGR
Sbjct: 100 QALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGR 159
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMI 353
++++++ ++L + + FVLDEAD M+
Sbjct: 160 VFDMLN--RRYLSPKY-IKMFVLDEADEML 186
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 265 (98.3 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 69/209 (33%), Positives = 115/209 (55%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
++++++ + ++M +I + PTP+QK IP + K D++ A+TGSGKT AF LP
Sbjct: 223 ESFHDVDMGEIIMGNITLSRYTRPTPVQKYAIPII--KTKRDLMACAQTGSGKTAAFLLP 280
Query: 233 IMQRLLEEREKAGKMLEEKGEEAE--KYAP-KGHLRALIITPTRELALQVTDHLKEVAKG 289
++ ++ E + + E KY K + +L++ PTRELALQ+ D ++ A
Sbjct: 281 VLSQIYSEGPGEALQATKASTQQENGKYVRRKQYPISLVLAPTRELALQIYDEARKFAYR 340
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
VR + GG +Q R L+ L+V TPGRL ++M G+ + L + VLDEA
Sbjct: 341 SRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDYCKYLVLDEA 397
Query: 350 DRMIENGHFRELQSII--DMLPMTNGSNE 376
DRM++ G +++ I+ D +P GS +
Sbjct: 398 DRMLDMGFEPQIRRIVEQDTMP-PKGSRQ 425
>DICTYBASE|DDB_G0292992 [details] [associations]
symbol:helA "putative RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292992 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000199 KO:K14808 HSSP:P10081 EMBL:X81822
RefSeq:XP_629281.1 ProteinModelPortal:Q54CD8 STRING:Q54CD8
EnsemblProtists:DDB0215372 GeneID:8629004 KEGG:ddi:DDB_G0292992
OMA:RLPKDGH ProtClustDB:CLSZ2429315 Uniprot:Q54CD8
Length = 1091
Score = 179 (68.1 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 41/106 (38%), Positives = 63/106 (59%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
+RA+I++PTRELA+Q +K+ ++G +R + IVGG S E Q L P++++ TPGR
Sbjct: 301 VRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDIIIATPGR 360
Query: 324 LWE-LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
L L+ G + L + + V DEADR+ E G +L I+ L
Sbjct: 361 LMHHLLETG----MSLSKVQYIVFDEADRLFEMGFNEQLTEILSKL 402
Score = 137 (53.3 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 35/90 (38%), Positives = 51/90 (56%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
++ EEE S+ + T + + L L+K+I + GF PTPIQ+ IP G DI
Sbjct: 215 NEQEEETTSKKKKKT--GGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMIL-DGH-DI 270
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKAG 245
+G A TGSGKT AF +P++Q+L + G
Sbjct: 271 VGMARTGSGKTGAFVIPMIQKLGDHSTTVG 300
Score = 48 (22.0 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 394 KKRQTLVFSATI-ALSADF 411
+ RQTL+FSAT+ +L DF
Sbjct: 404 ENRQTLLFSATLPSLLVDF 422
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 33/141 (23%), Positives = 61/141 (43%)
Query: 269 ITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKAR-PELVVG--TPG-RL 324
++ + + D L E+ G N ++ I+ +S +Q L A P L+V G
Sbjct: 372 LSKVQYIVFDEADRLFEM--GFNEQLTEILSKLSENRQTLLFSATLPSLLVDFVRAGLNN 429
Query: 325 WELMS-GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
+L++ + + E +LSFF L +++ L+ II P + + T
Sbjct: 430 PKLINLDTDTKISENLSLSFFTLRHEEKL--GVLLFLLKDIIYKKPQLPTTET--TTTTT 485
Query: 384 TCVTVSSLQRKKRQTLVFSAT 404
T + Q+KK T++F +T
Sbjct: 486 TNNESNQQQQKKSSTIIFVST 506
Score = 41 (19.5 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 22 KRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELD--GGFLSLE 67
K+++KS + E++ S + SF +N+ S + GGF S++
Sbjct: 189 KKSKKSNKKEEIESSEKFESFPMDENNEQEEETTSKKKKKTGGFQSMD 236
>ZFIN|ZDB-GENE-021212-1 [details] [associations]
symbol:ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
55" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021212-1 GO:GO:0007275 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AF506203 EMBL:BC059534 IPI:IPI00493927 RefSeq:NP_775336.1
UniGene:Dr.16883 ProteinModelPortal:Q8JHJ2 STRING:Q8JHJ2
GeneID:286745 KEGG:dre:286745 InParanoid:Q8JHJ2 NextBio:20806420
ArrayExpress:Q8JHJ2 Uniprot:Q8JHJ2
Length = 593
Score = 263 (97.6 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 73/216 (33%), Positives = 112/216 (51%)
Query: 175 WNEL--RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
W L +LH +++++ LGF TP+Q ACIP D+ A TGSGKTLAF +P
Sbjct: 9 WGSLPVKLHDNILQTLKELGFTYMTPVQSACIPL--FMSNKDVAAEAVTGSGKTLAFVIP 66
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-N 291
++ LL+ EK KM + G ALIITPTRELA+Q+++ + +G
Sbjct: 67 ALEILLKREEKLKKM--QVG-------------ALIITPTRELAMQISEVMGRFLQGFPQ 111
Query: 292 VRVVPIVGGMST-EKQERLLKARPELVVGTPGRLWELM---SGGEKHLVELHTLSFFVLD 347
+ ++GG + E E+L +++ TPGRL ++ + G + +L VLD
Sbjct: 112 FTQILLIGGSNPIEDVEKLKTQGANIIIATPGRLEDMFRRKADGLDLATAVKSLDVLVLD 171
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
EADR+++ G L +I+ LP + + QTQ
Sbjct: 172 EADRLLDMGFEASLNTILGYLPKQRRTGLFSATQTQ 207
>MGI|MGI:1919240 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005102 "receptor binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006396 "RNA processing" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016070 "RNA metabolic process" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1919240 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
GO:GO:0030331 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
GeneTree:ENSGT00550000075100 CTD:79039 HOVERGEN:HBG051333
EMBL:AF319547 EMBL:BC043699 IPI:IPI00875042 RefSeq:NP_082317.1
UniGene:Mm.24495 ProteinModelPortal:Q8K4L0 SMR:Q8K4L0 STRING:Q8K4L0
PhosphoSite:Q8K4L0 PaxDb:Q8K4L0 PRIDE:Q8K4L0
Ensembl:ENSMUST00000031598 GeneID:71990 KEGG:mmu:71990
UCSC:uc008zhq.1 NextBio:335150 Bgee:Q8K4L0 CleanEx:MM_DDX54
Genevestigator:Q8K4L0 Uniprot:Q8K4L0
Length = 874
Score = 189 (71.6 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 44/105 (41%), Positives = 62/105 (59%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
RALI++PTRELALQ KE+ K ++ I+GG E Q L P++++ TPGRL
Sbjct: 167 RALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRL 226
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ E +L +L ++ + V DEADR+ E G +LQ II LP
Sbjct: 227 VHVAV--EMNL-KLQSVEYVVFDEADRLFEMGFAEQLQEIIGRLP 268
Score = 129 (50.5 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 148 SVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA 207
S VS+ D E + ++ + + + + L + K I + G+K PTPIQ+ IP
Sbjct: 70 SECVSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVI 129
Query: 208 AHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 245
GK D++ A TGSGKT F LP+ +RL + G
Sbjct: 130 L-DGK-DVVAMARTGSGKTACFLLPMFERLKARSAQTG 165
Score = 38 (18.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 271 PTRELALQVTDHLKEVAKGINVRVV 295
P REL + + + E +G+ VV
Sbjct: 621 PQRELPQEEEEEMVETVEGVFTEVV 645
Score = 37 (18.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 240 EREKAGKMLEEKGEEAE 256
E++ AG +L+ G+EA+
Sbjct: 697 EQQVAGAVLDLMGDEAQ 713
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 179 (68.1 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 44/107 (41%), Positives = 66/107 (61%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPG 322
++AL++ PTRELA QV ++ + + I N++V+ + GGM Q L+ ++VGTPG
Sbjct: 73 VQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPG 132
Query: 323 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
R+ + +S L EL+TL VLDEADRM+E G L++II P
Sbjct: 133 RILDHLSKDRIDLSELNTL---VLDEADRMLEMGFQEALEAIIAAAP 176
Score = 122 (48.0 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
L L P L+ ++ +GF TPIQ +PA +G+ D+IG +TGSGKT AFGL ++ L
Sbjct: 9 LNLKPELLANLETMGFATMTPIQAQSLPAIL-KGQ-DVIGQGKTGSGKTAAFGLGVLSNL 66
Query: 238 LEER 241
+R
Sbjct: 67 NVKR 70
Score = 46 (21.3 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 395 KRQTLVFSATIALSAD-FRKKLKHGSLKLK-QSVNGLNSI 432
+RQTL+FSAT S + + + +L +K ++ + +SI
Sbjct: 178 ERQTLLFSATYPASIEQIAQSVTRNALMIKVEATHDTSSI 217
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 182 (69.1 bits), Expect = 3.8e-20, Sum P(3) = 3.8e-20
Identities = 37/105 (35%), Positives = 67/105 (63%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
R LI+ PTRELA QV ++ ++ K + + + ++GG+S ++QE LL+ ++++ TPGRL
Sbjct: 77 RCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQRGVDVLIATPGRL 136
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ G+ ++ + TL ++DEADRM++ G +++ I LP
Sbjct: 137 MDQFDRGKLLMMGVETL---IIDEADRMLDMGFIPDIEKICAKLP 178
Score = 127 (49.8 bits), Expect = 3.8e-20, Sum P(3) = 3.8e-20
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
++K++ G+ PTPIQ+ IP G D+ G A+TG+GKT AF LP++QRL R +
Sbjct: 15 ILKAVTESGYTIPTPIQREAIPHILMGG--DVTGVAQTGTGKTAAFVLPMIQRLSTGRAR 72
Query: 244 A 244
A
Sbjct: 73 A 73
Score = 41 (19.5 bits), Expect = 3.8e-20, Sum P(3) = 3.8e-20
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 396 RQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSE 437
RQTL+FSAT K K + + ET+S+
Sbjct: 181 RQTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQ 222
>RGD|1562539 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10116 "Rattus norvegicus" [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=ISO] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:1562539 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730 GO:GO:0003723
GO:GO:0006396 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000075100 IPI:IPI00193685
Ensembl:ENSRNOT00000001859 UCSC:RGD:1562539 OrthoDB:EOG469QTB
Uniprot:D3ZHY6
Length = 906
Score = 189 (71.6 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 44/105 (41%), Positives = 62/105 (59%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
RALI++PTRELALQ KE+ K ++ I+GG E Q L P++++ TPGRL
Sbjct: 167 RALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRL 226
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ E +L +L ++ + V DEADR+ E G +LQ II LP
Sbjct: 227 VHVAV--EMNL-KLQSVEYVVFDEADRLFEMGFAEQLQEIIGRLP 268
Score = 129 (50.5 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 148 SVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA 207
S VS+ D E + ++ + + + + L + K I + G+K PTPIQ+ IP
Sbjct: 70 SECVSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVI 129
Query: 208 AHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 245
GK D++ A TGSGKT F LP+ +RL + G
Sbjct: 130 L-DGK-DVVAMARTGSGKTACFLLPMFERLKARSAQTG 165
Score = 37 (18.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 240 EREKAGKMLEEKGEEAE 256
E++ AG +L+ G+EA+
Sbjct: 697 EQQVAGAVLDLMGDEAQ 713
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 242 (90.2 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 64/178 (35%), Positives = 98/178 (55%)
Query: 192 GFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEK 251
GF PT IQ P G D++G A TGSGKTLAF LP + +++ L ++
Sbjct: 129 GFTAPTVIQGQSWPIIL--GGNDLVGLAATGSGKTLAFLLPALLKIIS--------LPKR 178
Query: 252 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLK 311
P L++ PTRELA Q+ + K +G ++R + GG+ Q R+L+
Sbjct: 179 PSYGA--TPL----VLVMAPTRELAQQIEEVCKTSIRGTSIRQLCAYGGLGKIDQSRILR 232
Query: 312 ARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
++V+GTPGRL +L+ KH L ++ + VLDEADRM++ G +++S+ID +P
Sbjct: 233 NGVDIVIGTPGRLNDLL---RKH--HLSSVQYLVLDEADRMLDMGFMPQIESLIDQIP 285
Score = 63 (27.2 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 394 KKRQTLVFSATIA-----LSADFRK---KLKHGSLKLKQSVNGLNSIETLSERAGMRANV 445
K+RQTL+FSAT L++ F K K+ GS +L S+N I + + + ++++
Sbjct: 286 KERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQHIVNIDDLSDLQSDD 345
Query: 446 AIVDLTNVSVLAN 458
I D N + A+
Sbjct: 346 LIYDEINKILTAD 358
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 259 (96.2 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 74/228 (32%), Positives = 124/228 (54%)
Query: 146 EESVTVSNGPDDAEEELVSEAE---ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
E+ TV N DA E++ E + + + E+ L L +I R + +PTP+Q+
Sbjct: 131 EQDNTVINF--DAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRH 188
Query: 203 CIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG 262
IP +G+ D++ A+TGSGKT AF PI+ +++++ + +G Y P
Sbjct: 189 AIPILL-EGR-DLMACAQTGSGKTAAFCFPIISGIMKDQH----VQRPRGSRTV-Y-PL- 239
Query: 263 HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPG 322
A+I++PTRELA Q+ D K+ + V+VV GG +Q R L+ +++V TPG
Sbjct: 240 ---AVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPG 296
Query: 323 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
RL +L+ E+ V + + F LDEADRM++ G +++ I++ + M
Sbjct: 297 RLNDLL---ERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDM 341
Score = 43 (20.2 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 393 RKKRQTLVFSATIA-----LSADF 411
R RQTL+FSAT L+ADF
Sbjct: 344 RGVRQTLLFSATFPREIQRLAADF 367
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 261 (96.9 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 68/196 (34%), Positives = 105/196 (53%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
L LLM++I F +PTP+QK IP +G+ D++ A+TGSGKT F P+ L
Sbjct: 161 LDELLMENIKLASFTKPTPVQKYSIPIVT-KGR-DLMACAQTGSGKTGGFLFPLFTELFR 218
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
+ EK + Y+ KG+ AL++ PTRELA Q+ + ++ VR + G
Sbjct: 219 SGPSP---VPEKAQSF--YSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYG 273
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
G Q R + +L+V TPGRL +L+ G+ V L + + VLDEADRM++ G
Sbjct: 274 GAPIGNQMREVDRGCDLLVATPGRLNDLLERGK---VSLANIKYLVLDEADRMLDMGFEP 330
Query: 360 ELQSIIDMLPMTNGSN 375
+++ I++ M + N
Sbjct: 331 QIRHIVEECDMPSVEN 346
Score = 40 (19.1 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 394 KKRQTLVFSAT 404
+ RQTL+FSAT
Sbjct: 345 ENRQTLMFSAT 355
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 196 (74.1 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 56/172 (32%), Positives = 95/172 (55%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L L I+PTRELALQ+ D+L E+ V V + GG+S + Q R +K +VV TPGR
Sbjct: 224 LSVLCISPTRELALQIYDNLIELTADSGVNCVAVYGGVSKDDQIRKIKTA-NVVVATPGR 282
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
L +L++ G + L +++ VLDEADRM+E G ++++II SN SE+ Q
Sbjct: 283 LVDLINDGA---INLGKVNYLVLDEADRMLEKGFEEDIKTII--------SNTSNSER-Q 330
Query: 384 TCVTVSSLQRKKRQTL--VFSATIALSADFRKKLKHGSLKLKQSVNGLNSIE 433
T + ++ ++ R+ ++ + ++ R +L + ++ Q V +N +
Sbjct: 331 TLMFTATWPKEVRELANNFMNSPVKVTVGDRDELS-ANKRITQVVEVINKFD 381
Score = 113 (44.8 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 193 FKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLL 238
F +PTPIQ P GK D+IG AETGSGKT AFG+P + ++
Sbjct: 173 FDKPTPIQSVSWPFLL-SGK-DVIGVAETGSGKTFAFGVPAINNII 216
Score = 42 (19.8 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 235 QRLLEEREKAGKM-LEEKGEEAEKYAPK 261
QR LE++EK K ++K E+ EK K
Sbjct: 63 QRKLEKQEKKDKKDKKDKKEKKEKKEKK 90
Score = 38 (18.4 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 14 KETKPNRRKRTRKSREAEKLNSLKWNSSFSAADND 48
K+ K ++++ K + EK + +S A ND
Sbjct: 77 KKDKKEKKEKKEKKHKKEKKHKDSESSPVEPAAND 111
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 257 (95.5 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 76/236 (32%), Positives = 122/236 (51%)
Query: 207 AAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 266
A +G+ D++ +A+TG+GKT AF LPI+Q KM+E E K + R
Sbjct: 34 AIRRGQ-DVLASAQTGTGKTAAFALPILQ----------KMVENPSETL-----KSNTRV 77
Query: 267 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 326
LI+TPTRELA QV ++++ +K +N V+ I GG+ E Q + LK +++V TPGRL E
Sbjct: 78 LILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLKRGADIIVATPGRLLE 137
Query: 327 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 386
++ + L ++ F VLDEADRM++ G ++Q I+ + N+ + +
Sbjct: 138 HLTACN---LSLSSVDFLVLDEADRMLDMGFSADIQKILQAV------NK-KRQNLLFSA 187
Query: 387 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR 442
T SS +K ++ + +SAD + ++ V E LSE G +
Sbjct: 188 TFSSAVKKLANEMMIKPQV-ISADKQNTTADTVSQVVYPVEQRRKRELLSELIGKK 242
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/58 (43%), Positives = 44/58 (75%)
Query: 182 PLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
P ++++I G+++ TPIQ+ IPA +G+ D++ +A+TG+GKT AF LPI+Q+++E
Sbjct: 10 PEILRAISDCGYQKMTPIQQQAIPAI-RRGQ-DVLASAQTGTGKTAAFALPILQKMVE 65
>UNIPROTKB|E1BGI6 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0003723 GO:GO:0006396 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:DAAA02045421
IPI:IPI00690851 Ensembl:ENSBTAT00000029525 Uniprot:E1BGI6
Length = 877
Score = 191 (72.3 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 45/117 (38%), Positives = 67/117 (57%)
Query: 253 EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKA 312
E + ++ + RALI++PTRELALQ KE+ K ++ I+GG E Q L
Sbjct: 156 ERLKTHSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMEDQFAALHE 215
Query: 313 RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
P++++ TPGRL + E +L +L ++ + V DEADR+ E G +LQ II LP
Sbjct: 216 NPDIIIATPGRLVHVAV--EMNL-KLQSVEYVVFDEADRLFEMGFAEQLQEIIGRLP 269
Score = 124 (48.7 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 32/102 (31%), Positives = 50/102 (49%)
Query: 144 TVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
T S S+ D E + ++ + + + + L + K I + G+K PTPIQ+
Sbjct: 67 TFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKT 126
Query: 204 IPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 245
IP GK D++ A TGSGKT F +P+ +RL + G
Sbjct: 127 IPMIL-DGK-DVVAMARTGSGKTACFLIPMFERLKTHSAQTG 166
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 168 (64.2 bits), Expect = 7.7e-20, Sum P(3) = 7.7e-20
Identities = 43/108 (39%), Positives = 62/108 (57%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
+ALI+ PTRELALQV + AK + V VV + GG Q + ++ ++VV TPGR
Sbjct: 76 QALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRNGAQIVVATPGR 135
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 371
L + + EK L T++ VLDEAD M++ G +L+ I +P T
Sbjct: 136 LCDHLRRDEKVLA---TVNHLVLDEADEMLKLGFMDDLEVIFKAMPET 180
Score = 137 (53.3 bits), Expect = 7.7e-20, Sum P(3) = 7.7e-20
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA--AAHQGKVDIIGAAETGSGK 225
++ E + L LHP ++ ++ G++EP+ IQ+ IP A H D+IG A+TG+GK
Sbjct: 1 MTQEIGGFAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGH----DMIGQAQTGTGK 56
Query: 226 TLAFGLPIMQRL-LEEREKAGKMLEEKGEEAEKYA 259
T AF LPI+ R+ +RE +L E A + A
Sbjct: 57 TAAFALPILHRIDPSKREPQALILAPTRELALQVA 91
Score = 45 (20.9 bits), Expect = 7.7e-20, Sum P(3) = 7.7e-20
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 396 RQTLVFSATI-----ALSADFRKKLKHGSLKLK-QSVNGLNSIETLSERAGMRANVAIVD 449
RQT++FSAT+ A++ K KH ++ K Q+V + L A + + A++
Sbjct: 181 RQTVLFSATLPQSIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLVH-ADQKTS-AVLS 238
Query: 450 LTNV 453
L V
Sbjct: 239 LLEV 242
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 261 (96.9 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 65/200 (32%), Positives = 114/200 (57%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
++++++ + ++M +I + PTP+QK IP K D++ A+TGSGKT AF LP
Sbjct: 181 ESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDLMACAQTGSGKTAAFLLP 238
Query: 233 IMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
I+ ++ + +A K ++E G + K + +L++ PTRELA+Q+ + ++ +
Sbjct: 239 ILSQIYTDGPGEALKAVKENGRYGRR---KQYPISLVLAPTRELAVQIYEEARKFSYRSR 295
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
VR + GG +Q R L+ L+V TPGRL ++M G+ + L + VLDEADR
Sbjct: 296 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDFCKYLVLDEADR 352
Query: 352 MIENGHFRELQSII--DMLP 369
M++ G +++ I+ D +P
Sbjct: 353 MLDMGFEPQIRRIVEQDTMP 372
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 259 (96.2 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 75/217 (34%), Positives = 116/217 (53%)
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
P DA + V E TEF + L LL+++I F +PTP+QK +P A+ G+ D
Sbjct: 129 PVDASGKDVPEP--ITEFTS---PPLDGLLLENIKLARFTKPTPVQKYSVPIVAN-GR-D 181
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
++ A+TGSGKT F P+ L E K G + + + Y K + A+I+ PTRE
Sbjct: 182 LMACAQTGSGKTGGFLFPV----LSESFKTGPSPQPESQ-GSFYQRKAYPTAVIMAPTRE 236
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA Q+ D K+ V+ + GG Q R ++ +L+V TPGRL +L+ G+
Sbjct: 237 LATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGK-- 294
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 371
+ L + + VLDEADRM++ G +++ I++ MT
Sbjct: 295 -ISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMT 330
Score = 40 (19.1 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 395 KRQTLVFSAT 404
+RQTL+FSAT
Sbjct: 334 ERQTLMFSAT 343
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 175 (66.7 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 38/106 (35%), Positives = 64/106 (60%)
Query: 267 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 326
L++TPTRELA Q+ + + + K + ++ IVGGM Q L +P +VV TPGRL +
Sbjct: 74 LVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLELSKKPHVVVATPGRLAD 133
Query: 327 LMSGGEKHLVELHTLSFFVLDEADRMIENG--HF-RELQSIIDMLP 369
+ + + L+ + F ++DEADR++E G F ++L+ I+ +P
Sbjct: 134 HIRSSDT--INLNRIQFLIMDEADRLLEQGCTDFTKDLEVILSAVP 177
Score = 132 (51.5 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ L L L++ ++G PT +Q+ CIPA G+ D +G A+TGSGKT AF LP++
Sbjct: 4 FESLGLSEWLIQQCKQMGISRPTAVQEKCIPAIL-DGR-DCMGCAKTGSGKTAAFVLPVL 61
Query: 235 QRLLEE 240
Q+L E+
Sbjct: 62 QKLSED 67
Score = 52 (23.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 376 EGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+G ++ T+ + S KRQTL+FSAT+
Sbjct: 160 QGCTDFTKDLEVILSAVPAKRQTLLFSATL 189
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 249 (92.7 bits), Expect = 9.8e-20, Sum P(3) = 9.8e-20
Identities = 68/191 (35%), Positives = 107/191 (56%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E L L K++ + G+ +PTP+QK IP + G+ D++ A+TGSGKT AF LPI+
Sbjct: 279 FEEAGLCDSLSKNVSKSGYVKPTPVQKHGIPIIS-AGR-DLMACAQTGSGKTAAFLLPIL 336
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QR + + A K E +E E A+I+ PTREL Q+ ++ A G VR
Sbjct: 337 QRFMTDGVAASKFSEI--QEPE---------AIIVAPTRELINQIYLEARKFAYGTCVRP 385
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GG++T R + ++ TPGRL +L+ G+ + L + + VLDEADRM++
Sbjct: 386 VVVYGGINTGYTIREVLKGCNVLCATPGRLHDLIGRGK---IGLSKVRYLVLDEADRMLD 442
Query: 355 NGHFRELQSII 365
G E++ ++
Sbjct: 443 MGFEPEMRKLV 453
Score = 46 (21.3 bits), Expect = 9.8e-20, Sum P(3) = 9.8e-20
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 393 RKKRQTLVFSATIA-----LSADFRK 413
+++RQTL+FSAT ++ADF K
Sbjct: 461 KEERQTLMFSATYPEDIQRMAADFLK 486
Score = 44 (20.5 bits), Expect = 9.8e-20, Sum P(3) = 9.8e-20
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 38 WNSSFSAADNDPFAFLVGSNELDGGFLS 65
W S + F +GSN DGGF S
Sbjct: 4 WEEDQSPVVSCSSGFGLGSNGSDGGFKS 31
>UNIPROTKB|Q8TDD1 [details] [associations]
symbol:DDX54 "ATP-dependent RNA helicase DDX54"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006396
"RNA processing" evidence=IDA] [GO:0016070 "RNA metabolic process"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
GO:GO:0030331 GO:GO:0030520 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
EMBL:AF478457 EMBL:AC089999 EMBL:AY148094 EMBL:BC005848
IPI:IPI00152510 IPI:IPI00879999 RefSeq:NP_001104792.1
RefSeq:NP_076977.3 UniGene:Hs.506861 ProteinModelPortal:Q8TDD1
SMR:Q8TDD1 IntAct:Q8TDD1 STRING:Q8TDD1 PhosphoSite:Q8TDD1
DMDM:46576615 SWISS-2DPAGE:Q8TDD1 PaxDb:Q8TDD1 PRIDE:Q8TDD1
DNASU:79039 Ensembl:ENST00000306014 Ensembl:ENST00000314045
GeneID:79039 KEGG:hsa:79039 UCSC:uc001tup.3 UCSC:uc001tuq.4
CTD:79039 GeneCards:GC12M113595 HGNC:HGNC:20084 HPA:HPA028244
MIM:611665 neXtProt:NX_Q8TDD1 PharmGKB:PA134992026
HOVERGEN:HBG051333 InParanoid:Q8TDD1 ChiTaRS:DDX54 GenomeRNAi:79039
NextBio:67773 ArrayExpress:Q8TDD1 Bgee:Q8TDD1 CleanEx:HS_DDX54
Genevestigator:Q8TDD1 GermOnline:ENSG00000123064 Uniprot:Q8TDD1
Length = 881
Score = 187 (70.9 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 45/117 (38%), Positives = 66/117 (56%)
Query: 253 EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKA 312
E + ++ + RALI++PTRELALQ KE+ K ++ I+GG E Q L
Sbjct: 156 ERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHE 215
Query: 313 RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
P++++ TPGRL + E L +L ++ + V DEADR+ E G +LQ II LP
Sbjct: 216 NPDIIIATPGRLVHVAV--EMSL-KLQSVEYVVFDEADRLFEMGFAEQLQEIIARLP 269
Score = 127 (49.8 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 33/102 (32%), Positives = 50/102 (49%)
Query: 144 TVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
T S S+ D E + ++ + + + + L + K I + G+K PTPIQ+
Sbjct: 67 TFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKT 126
Query: 204 IPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 245
IP GK D++ A TGSGKT F LP+ +RL + G
Sbjct: 127 IPVIL-DGK-DVVAMARTGSGKTACFLLPMFERLKTHSAQTG 166
Score = 38 (18.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 240 EREKAGKMLEEKGEEAE 256
E++ AG +L+ G+EA+
Sbjct: 705 EQQAAGAVLDLMGDEAQ 721
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 260 (96.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 64/200 (32%), Positives = 115/200 (57%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
++++++ + ++M +I + PTP+QK IP K D++ A+TGSGKT AF LP
Sbjct: 178 ESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDLMACAQTGSGKTAAFLLP 235
Query: 233 IMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
I+ ++ + +A + ++E G+ + K + +L++ PTRELA+Q+ + ++ +
Sbjct: 236 ILSQIYTDGPGEALRAMKENGKYGRR---KQYPISLVLAPTRELAVQIYEEARKFSYRSR 292
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
VR + GG +Q R L+ L+V TPGRL ++M G+ + L + VLDEADR
Sbjct: 293 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDFCKYLVLDEADR 349
Query: 352 MIENGHFRELQSII--DMLP 369
M++ G +++ I+ D +P
Sbjct: 350 MLDMGFEPQIRRIVEQDTMP 369
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 260 (96.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 64/200 (32%), Positives = 115/200 (57%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
++++++ + ++M +I + PTP+QK IP K D++ A+TGSGKT AF LP
Sbjct: 179 ESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDLMACAQTGSGKTAAFLLP 236
Query: 233 IMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
I+ ++ + +A + ++E G+ + K + +L++ PTRELA+Q+ + ++ +
Sbjct: 237 ILSQIYTDGPGEALRAMKENGKYGRR---KQYPISLVLAPTRELAVQIYEEARKFSYRSR 293
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
VR + GG +Q R L+ L+V TPGRL ++M G+ + L + VLDEADR
Sbjct: 294 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDFCKYLVLDEADR 350
Query: 352 MIENGHFRELQSII--DMLP 369
M++ G +++ I+ D +P
Sbjct: 351 MLDMGFEPQIRRIVEQDTMP 370
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 260 (96.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 64/200 (32%), Positives = 114/200 (57%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
++++++ + ++M +I + PTP+QK IP K D++ A+TGSGKT AF LP
Sbjct: 179 ESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDLMACAQTGSGKTAAFLLP 236
Query: 233 IMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
I+ ++ + +A + ++E G + K + +L++ PTRELA+Q+ + ++ +
Sbjct: 237 ILSQIYSDGPGEALRAMKENGRYGRR---KQYPISLVLAPTRELAVQIYEEARKFSYRSR 293
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
VR + GG +Q R L+ L+V TPGRL ++M G+ + L + VLDEADR
Sbjct: 294 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDFCKYLVLDEADR 350
Query: 352 MIENGHFRELQSII--DMLP 369
M++ G +++ I+ D +P
Sbjct: 351 MLDMGFEPQIRRIVEQDTMP 370
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 260 (96.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 64/200 (32%), Positives = 114/200 (57%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
++++++ + ++M +I + PTP+QK IP K D++ A+TGSGKT AF LP
Sbjct: 180 ESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDLMACAQTGSGKTAAFLLP 237
Query: 233 IMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
I+ ++ + +A + ++E G + K + +L++ PTRELA+Q+ + ++ +
Sbjct: 238 ILSQIYSDGPGEALRAMKENGRYGRR---KQYPISLVLAPTRELAVQIYEEARKFSYRSR 294
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
VR + GG +Q R L+ L+V TPGRL ++M G+ + L + VLDEADR
Sbjct: 295 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDFCKYLVLDEADR 351
Query: 352 MIENGHFRELQSII--DMLP 369
M++ G +++ I+ D +P
Sbjct: 352 MLDMGFEPQIRRIVEQDTMP 371
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 260 (96.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 64/200 (32%), Positives = 114/200 (57%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
++++++ + ++M +I + PTP+QK IP K D++ A+TGSGKT AF LP
Sbjct: 180 ESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDLMACAQTGSGKTAAFLLP 237
Query: 233 IMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
I+ ++ + +A + ++E G + K + +L++ PTRELA+Q+ + ++ +
Sbjct: 238 ILSQIYSDGPGEALRAMKENGRYGRR---KQYPISLVLAPTRELAVQIYEEARKFSYRSR 294
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
VR + GG +Q R L+ L+V TPGRL ++M G+ + L + VLDEADR
Sbjct: 295 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDFCKYLVLDEADR 351
Query: 352 MIENGHFRELQSII--DMLP 369
M++ G +++ I+ D +P
Sbjct: 352 MLDMGFEPQIRRIVEQDTMP 371
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 260 (96.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 64/200 (32%), Positives = 114/200 (57%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
++++++ + ++M +I + PTP+QK IP K D++ A+TGSGKT AF LP
Sbjct: 180 ESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDLMACAQTGSGKTAAFLLP 237
Query: 233 IMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
I+ ++ + +A + ++E G + K + +L++ PTRELA+Q+ + ++ +
Sbjct: 238 ILSQIYSDGPGEALRAMKENGRYGRR---KQYPISLVLAPTRELAVQIYEEARKFSYRSR 294
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
VR + GG +Q R L+ L+V TPGRL ++M G+ + L + VLDEADR
Sbjct: 295 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDFCKYLVLDEADR 351
Query: 352 MIENGHFRELQSII--DMLP 369
M++ G +++ I+ D +P
Sbjct: 352 MLDMGFEPQIRRIVEQDTMP 371
>TAIR|locus:2828586 [details] [associations]
symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
Length = 505
Score = 257 (95.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 67/181 (37%), Positives = 100/181 (55%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
L P L+ ++ G+ PTPIQ IPAA GK ++ +A+TGSGKT +F +PI+ R
Sbjct: 117 LPPKLLLNLETAGYDFPTPIQMQAIPAAL-TGK-SLLASADTGSGKTASFLVPIISRCTT 174
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
E ++ P A+++ PTREL +QV D K + KG+ + +VG
Sbjct: 175 YHS------EHPSDQRRN--PL----AMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVG 222
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
G Q ++ EL++GTPGR+ +L+S KH +EL + FVLDE D M++ G FR
Sbjct: 223 GDPMSGQLYRIQQGVELIIGTPGRVVDLLS---KHTIELDNIMTFVLDEVDCMLQRG-FR 278
Query: 360 E 360
+
Sbjct: 279 D 279
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 260 (96.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 64/200 (32%), Positives = 114/200 (57%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
++++++ + ++M +I + PTP+QK IP K D++ A+TGSGKT AF LP
Sbjct: 222 ESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDLMACAQTGSGKTAAFLLP 279
Query: 233 IMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
I+ ++ + +A + ++E G + K + +L++ PTRELA+Q+ + ++ +
Sbjct: 280 ILSQIYSDGPGEALRAMKENGRYGRR---KQYPISLVLAPTRELAVQIYEEARKFSYRSR 336
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
VR + GG +Q R L+ L+V TPGRL ++M G+ + L + VLDEADR
Sbjct: 337 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDFCKYLVLDEADR 393
Query: 352 MIENGHFRELQSII--DMLP 369
M++ G +++ I+ D +P
Sbjct: 394 MLDMGFEPQIRRIVEQDTMP 413
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 259 (96.2 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 68/217 (31%), Positives = 117/217 (53%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
DD E + ++++++ + ++M +I + PTP+QK IP K D+
Sbjct: 142 DDIPVEATG-SNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDL 198
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
+ A+TGSGKT AF LPI+ ++ + A + ++E G + K + +L++ PTRE
Sbjct: 199 MACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRR---KQYPISLVLAPTRE 255
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA+Q+ + ++ A VR + GG +Q R L+ L+V TPGRL ++M G+
Sbjct: 256 LAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-- 313
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSII--DMLP 369
+ L + VLDEADRM++ G +++ I+ D +P
Sbjct: 314 -IGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMP 349
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 259 (96.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 64/200 (32%), Positives = 114/200 (57%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
++++++ + ++M +I + PTP+QK IP K D++ A+TGSGKT AF LP
Sbjct: 180 ESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDLMACAQTGSGKTAAFLLP 237
Query: 233 IMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
I+ ++ + +A + ++E G + K + +L++ PTRELA+Q+ + ++ +
Sbjct: 238 ILSQIYADGPGEALRAMKENGRYGRR---KQYPISLVLAPTRELAVQIYEEARKFSYRSR 294
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
VR + GG +Q R L+ L+V TPGRL ++M G+ + L + VLDEADR
Sbjct: 295 VRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDFCKYLVLDEADR 351
Query: 352 MIENGHFRELQSII--DMLP 369
M++ G +++ I+ D +P
Sbjct: 352 MLDMGFEPQIRRIVEQDTMP 371
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 259 (96.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 64/200 (32%), Positives = 114/200 (57%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
++++++ + ++M +I + PTP+QK IP K D++ A+TGSGKT AF LP
Sbjct: 180 ESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDLMACAQTGSGKTAAFLLP 237
Query: 233 IMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
I+ ++ + +A + ++E G + K + +L++ PTRELA+Q+ + ++ +
Sbjct: 238 ILSQIYADGPGEALRAMKENGRYGRR---KQYPISLVLAPTRELAVQIYEEARKFSYRSR 294
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
VR + GG +Q R L+ L+V TPGRL ++M G+ + L + VLDEADR
Sbjct: 295 VRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDFCKYLVLDEADR 351
Query: 352 MIENGHFRELQSII--DMLP 369
M++ G +++ I+ D +P
Sbjct: 352 MLDMGFEPQIRRIVEQDTMP 371
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 170 (64.9 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 35/105 (33%), Positives = 63/105 (60%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
+ALI+ PTRELA Q+ + + + + V +GG + + R+L++ +VVGTPGR+
Sbjct: 100 QALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVGTPGRV 159
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+++++ + ++ + FVLDEAD M+ G ++Q + MLP
Sbjct: 160 YDMIN---RKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLP 201
Score = 133 (51.9 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 30/86 (34%), Positives = 53/86 (61%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQ-KACIPAAAHQG 211
+GP E E V E+ +D ++++ L L++ IY GF++P+ IQ +A IP +G
Sbjct: 10 DGPASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCV--RG 67
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRL 237
+ D+I A++G+GKT F + I+Q++
Sbjct: 68 R-DVIAQAQSGTGKTATFSIAILQQI 92
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 258 (95.9 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 71/219 (32%), Positives = 120/219 (54%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
DD E+ ++++++ + ++M +I + PTP+QK IP K D+
Sbjct: 164 DDIPVEVTGN-NCPPHIESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDL 220
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
+ A+TGSGKT AF LPI+ ++ + +A K ++E G + K + +L++ PTRE
Sbjct: 221 MACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRR---KQYPISLVLAPTRE 277
Query: 275 LALQVTDHLKEVAKGINVRVVPIV--GGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 332
LA+Q+ + ++ + RV+P V GG +Q R L+ L+V TPGRL ++M G+
Sbjct: 278 LAVQIYEEARKFS--YRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK 335
Query: 333 KHLVELHTLSFFVLDEADRMIENGHFRELQSII--DMLP 369
+ L + VLDEADRM++ G +++ II D +P
Sbjct: 336 ---IGLDFCKYLVLDEADRMLDMGFEPQIRRIIEQDTMP 371
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 257 (95.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 65/198 (32%), Positives = 112/198 (56%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++++ + ++M +I + PTP+QK IP K D++ A+TGSG T AF LPI+
Sbjct: 175 FSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDLMACAQTGSGCTAAFLLPIL 232
Query: 235 QRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
++ + +A K ++E G + K + +L++ PTRELA+Q+ + ++ + VR
Sbjct: 233 SQIYTDGPGEALKAMKENGRYGRR---KQYPISLVLAPTRELAVQIYEEARKFSYRSRVR 289
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG T +Q R L+ L+V TPGRL ++M G+ + L + VLDEADRM+
Sbjct: 290 PCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGK---IGLDFCKYLVLDEADRML 346
Query: 354 ENGHFRELQSII--DMLP 369
+ G +++ I+ D +P
Sbjct: 347 DMGFEPQIRRIVEQDTMP 364
>UNIPROTKB|F8WDT8 [details] [associations]
symbol:DDX56 "Probable ATP-dependent RNA helicase DDX56"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC004938 HGNC:HGNC:18193 IPI:IPI00925990
ProteinModelPortal:F8WDT8 SMR:F8WDT8 Ensembl:ENST00000446987
ArrayExpress:F8WDT8 Bgee:F8WDT8 Uniprot:F8WDT8
Length = 185
Score = 235 (87.8 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 63/194 (32%), Positives = 109/194 (56%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P L++++ LG+ PT IQ+ IP A +GK D++ A TGSGKT A+ +P++
Sbjct: 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLAL-EGK-DLLARARTGSGKTAAYAIPML 66
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK--GINV 292
Q LL R+ G ++E+ +R L++ PT+ELA Q ++++A +V
Sbjct: 67 QLLLH-RKATGPVVEQA------------VRGLVLVPTKELARQAQSMIQQLATYCARDV 113
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH-TLSFFVLDEADR 351
RV + + Q +L +P++VVGTP R+ +S ++ ++L +L V+DEAD
Sbjct: 114 RVANVSAAEDSVSQRAVLMEKPDVVVGTPSRI---LSHLQQDSLKLRDSLELLVVDEADL 170
Query: 352 MIENGHFRELQSII 365
+ G EL+S++
Sbjct: 171 LFSFGFEEELKSLL 184
>WB|WBGene00022378 [details] [associations]
symbol:Y94H6A.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0040010 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:FO081810
GeneID:177054 KEGG:cel:CELE_Y94H6A.5 UCSC:Y94H6A.5a CTD:177054
NextBio:895136 RefSeq:NP_741347.2 ProteinModelPortal:Q688Z4
SMR:Q688Z4 STRING:Q688Z4 PRIDE:Q688Z4 EnsemblMetazoa:Y94H6A.5b
WormBase:Y94H6A.5b InParanoid:Q688Z4 ArrayExpress:Q688Z4
Uniprot:Q688Z4
Length = 871
Score = 162 (62.1 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 38/106 (35%), Positives = 61/106 (57%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
+RAL+++PTRELALQ +KE+ + +R +VGG E+Q + P++++ TPGR
Sbjct: 94 IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGR 153
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
L ++ E L L + + V DEADR+ E G +L + +P
Sbjct: 154 LLHVIV--EMDL-RLSYVQYVVFDEADRLFEMGFQDQLTETLKRIP 196
Score = 142 (55.0 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
S+ +D + +++ + W ++ L + K+I + GF +PTPIQ+ IP G
Sbjct: 3 SDDEEDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIM-DG 61
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 245
K D++ + TGSGKT AF +P++Q+L + R+ G
Sbjct: 62 K-DVVAMSRTGSGKTAAFVIPMLQKL-KRRDTTG 93
Score = 50 (22.7 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 381 QTQTCVTVSSLQRKKRQTLVFSATIA-LSADFRK 413
Q Q T+ + + RQTL+FSAT+ + DF K
Sbjct: 185 QDQLTETLKRIP-ESRQTLLFSATLPKMLVDFAK 217
Score = 40 (19.1 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 391 LQRKKRQTLVFSATI 405
+ R+ +QT+VF AT+
Sbjct: 261 MDRENKQTVVFCATM 275
>UNIPROTKB|F1NTK9 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003714 GO:GO:0005730 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00550000075100
EMBL:AADN02043183 IPI:IPI00582285 ProteinModelPortal:F1NTK9
Ensembl:ENSGALT00000012108 Uniprot:F1NTK9
Length = 822
Score = 190 (71.9 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 45/117 (38%), Positives = 67/117 (57%)
Query: 253 EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKA 312
E + +P G RALI++PTRELALQ KE+ K ++ ++GG E Q L
Sbjct: 96 ERLKAPSPSG-ARALILSPTRELALQTLKFTKELGKFTGLKTALVLGGDKMEDQFAALHE 154
Query: 313 RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
P++++ TPGRL + E +L +L ++ + V DEADR+ E G +LQ I+ LP
Sbjct: 155 NPDIIIATPGRLVHVAV--EMNL-KLQSVEYVVFDEADRLFEMGFAEQLQEILARLP 208
Score = 118 (46.6 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
+ K + + G+K PTPIQ+ IP +G+ D++ A TGSGKT F LP+ +RL
Sbjct: 47 VFKGVMKKGYKVPTPIQRKTIPVIL-RGR-DVVAMARTGSGKTACFLLPMFERL 98
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 257 (95.5 bits), Expect = 3.3e-19, Sum P(3) = 3.3e-19
Identities = 61/153 (39%), Positives = 95/153 (62%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D+IG A+TGSGKT+AF LP+ + ++++R LEE GE G + A+I+TPTR
Sbjct: 410 DLIGIAKTGSGKTIAFLLPMFRHIMDQRA-----LEE-GE--------GPI-AVIMTPTR 454
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELALQ+T K+ +K + +RVV + GG +Q LK E++V TPGR+ ++++
Sbjct: 455 ELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNG 514
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+ L +++ VLDEADRM + G ++ I+D
Sbjct: 515 RVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVD 547
Score = 137 (53.3 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 37/97 (38%), Positives = 59/97 (60%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W + + ++ ++ + G+++PTPIQ IPA + G+ D+IG A+TGSGKT+AF LP+
Sbjct: 373 WVQCGISMKILTALKKHGYEKPTPIQSQAIPAIMN-GR-DLIGIAKTGSGKTIAFLLPMF 430
Query: 235 QRLLEEREKAGKMLEE-KGEEAEKYAPKGHLRALIIT 270
+ ++++R LEE +G A P L AL IT
Sbjct: 431 RHIMDQRA-----LEEGEGPIAVIMTPTREL-ALQIT 461
Score = 42 (19.8 bits), Expect = 3.3e-19, Sum P(3) = 3.3e-19
Identities = 14/58 (24%), Positives = 24/58 (41%)
Query: 14 KETKPNRRKRTRKSREAEK-LNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEID 70
K + R+K E +K + +K +S D+D E +G + EE+D
Sbjct: 168 KWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDDEETAEGEKEGNEVEDEELD 225
Score = 40 (19.1 bits), Expect = 3.3e-19, Sum P(3) = 3.3e-19
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 393 RKKRQTLVFSATI--ALSADFRKKL 415
R RQT++FSAT A+ A R+ L
Sbjct: 550 RPDRQTVMFSATFPRAMEALARRIL 574
Score = 39 (18.8 bits), Expect = 6.6e-19, Sum P(3) = 6.6e-19
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 13 SKETKPNRRKRTRKSREAEKLNS 35
S+E + +R +R +SRE + S
Sbjct: 73 SRERERSRERRRSRSRERRRSRS 95
Score = 38 (18.4 bits), Expect = 8.4e-19, Sum P(3) = 8.4e-19
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 11 EHSKETKPNRRKRTRKSREAEK 32
E S+E + +R + R+SR +
Sbjct: 77 ERSRERRRSRSRERRRSRSRSR 98
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 240 (89.5 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 56/156 (35%), Positives = 92/156 (58%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D++G A+TG+GKT AF LPI+ + R K ++ K + R+LI+TPTR
Sbjct: 41 DLLGIAQTGTGKTAAFSLPIINKF--GRNK----IDIKAKST---------RSLILTPTR 85
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELA Q+ ++ + + G+ ++ + GG+ + Q ++ +++V TPGRL +L+ G+
Sbjct: 86 ELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILVATPGRLLDLIETGD- 144
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ L FVLDEAD M++ G F+++QSII LP
Sbjct: 145 --INFKALEVFVLDEADTMLDMGFFKDVQSIISKLP 178
Score = 138 (53.6 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 176 NELRLHPLLMKSIYRL---GFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
+E + LL I R+ G+K+PTPIQK CIPA + G D++G A+TG+GKT AF LP
Sbjct: 2 SEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALIN-GN-DLLGIAQTGTGKTAAFSLP 59
Query: 233 IMQR 236
I+ +
Sbjct: 60 IINK 63
Score = 46 (21.3 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 388 VSSLQRKKRQTLVFSATI 405
+S L K RQTL+FSAT+
Sbjct: 174 ISKLP-KSRQTLLFSATM 190
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 196 (74.1 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 52/155 (33%), Positives = 82/155 (52%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D++G AETGSGKTL++ LP + + A +L AP LI+ PTR
Sbjct: 179 DVVGIAETGSGKTLSYCLPAIVHI-----NAQPLL----------APGDGPIVLILAPTR 223
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELA+Q+ + + K +R + GG+ Q R L E+ + TPGRL +++ G
Sbjct: 224 ELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRT 283
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
+L +++ VLDEADRM++ G +++ II +
Sbjct: 284 NL---RRVTYLVLDEADRMLDMGFEPQIRKIISQI 315
Score = 106 (42.4 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAA 219
E V ++ + ++E ++ + GF++PT IQ P A G+ D++G A
Sbjct: 127 EMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMAL-SGR-DVVGIA 184
Query: 220 ETGSGKTLAFGLP 232
ETGSGKTL++ LP
Sbjct: 185 ETGSGKTLSYCLP 197
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 253 (94.1 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 73/233 (31%), Positives = 119/233 (51%)
Query: 145 VEESVTVSNGPDDAEEELVSEAEIST-EFDAWNELRLHPL---LMKSIYRLGFKEPTPIQ 200
V + VS G + + + + E+S + + NE PL L+++I G+ +PTP+Q
Sbjct: 138 VADGTKVSTGINFEKYDDIP-VEVSGGDIEPVNEFTSPPLNSHLLQNIKLSGYTQPTPVQ 196
Query: 201 KACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAP 260
K IP G+ D++ A+TGSGKT F PI+ ++ A + ++ G Y P
Sbjct: 197 KNSIPIVT-SGR-DLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMG---YRP 251
Query: 261 -KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
K + LI+ PTREL Q+ + ++ VR + GG Q R + +L+
Sbjct: 252 RKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSA 311
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 372
TPGRL +L+ G + L + F VLDEADRM++ G +++ I++ MT+
Sbjct: 312 TPGRLVDLIDRGR---ISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTS 361
Score = 42 (19.8 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 394 KKRQTLVFSATIA-----LSADFRK 413
++RQTL+FSAT L+ DF K
Sbjct: 363 EERQTLMFSATFPRDIQLLARDFLK 387
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 259 (96.2 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 71/214 (33%), Positives = 114/214 (53%)
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIY-RLGFKEPTPIQKACIPAAAHQGKVDI 215
D + V ++ W+ L L L I+ +L F++P+ IQ +P G+ D+
Sbjct: 277 DLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTIL-SGR-DV 334
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 275
IG A+TGSGKTL++ LP+++ + +++ + +G P G LI++PTREL
Sbjct: 335 IGIAKTGSGKTLSYVLPMLRHIQDQQFSK----DNQG-------PIG----LILSPTREL 379
Query: 276 ALQVTDHLKEVAK-GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
ALQ+ + K N+RV GG S E Q LK E++VGTPGR+ +L++
Sbjct: 380 ALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGR 439
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
++ L +F VLDEADRM + G ++ I+ +
Sbjct: 440 VLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQI 473
Score = 39 (18.8 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 393 RKKRQTLVFSAT 404
R RQT++FSAT
Sbjct: 474 RPDRQTVLFSAT 485
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 259 (96.2 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 71/214 (33%), Positives = 114/214 (53%)
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIY-RLGFKEPTPIQKACIPAAAHQGKVDI 215
D + V ++ W+ L L L I+ +L F++P+ IQ +P G+ D+
Sbjct: 277 DLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTIL-SGR-DV 334
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 275
IG A+TGSGKTL++ LP+++ + +++ + +G P G LI++PTREL
Sbjct: 335 IGIAKTGSGKTLSYVLPMLRHIQDQQFSK----DNQG-------PIG----LILSPTREL 379
Query: 276 ALQVTDHLKEVAK-GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
ALQ+ + K N+RV GG S E Q LK E++VGTPGR+ +L++
Sbjct: 380 ALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGR 439
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
++ L +F VLDEADRM + G ++ I+ +
Sbjct: 440 VLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQI 473
Score = 39 (18.8 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 393 RKKRQTLVFSAT 404
R RQT++FSAT
Sbjct: 474 RPDRQTVLFSAT 485
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 252 (93.8 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 69/217 (31%), Positives = 118/217 (54%)
Query: 157 DAEEEL---VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKV 213
DA E++ S ++ + + ++ L L +I R + PTP+Q+ IP +
Sbjct: 132 DAYEDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAER-- 189
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D++ A+TGSGKT AF PI+ +++++ + +G A Y P A+I++PTR
Sbjct: 190 DLMACAQTGSGKTAAFCFPIISGIMKDQH----VERPRGSRAV-Y-PF----AVILSPTR 239
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELA Q+ D K+ + V+VV GG +Q R L+ +++V TPGRL +L+ E+
Sbjct: 240 ELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLL---ER 296
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
V + + F LDEADRM++ G +++ I++ + M
Sbjct: 297 ARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDM 333
Score = 41 (19.5 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 393 RKKRQTLVFSATIA-----LSADF 411
R RQT++FSAT L+ADF
Sbjct: 336 RGVRQTMLFSATFPSQIQRLAADF 359
>RGD|2324094 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:2324094
GO:GO:0005524 GO:GO:0003723 EMBL:CH473973 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 CTD:57696 KO:K14809
OrthoDB:EOG4WH8KN GeneTree:ENSGT00550000074969 IPI:IPI00370890
RefSeq:NP_001258255.1 UniGene:Rn.209289 Ensembl:ENSRNOT00000001387
GeneID:100362764 KEGG:rno:100362764 UCSC:RGD:2324094 Uniprot:D3ZX56
Length = 600
Score = 253 (94.1 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 73/217 (33%), Positives = 111/217 (51%)
Query: 174 AWNELR--LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+W L+ LHPL++ ++ LGF TP+Q A IP + K D+ A TGSGKTLAF +
Sbjct: 8 SWESLQVPLHPLVLGALRELGFLHMTPVQSATIPLFM-RNK-DVAAEAVTGSGKTLAFVI 65
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI- 290
PI++ LL EK K + A++ITPTRELA+Q+ + L K
Sbjct: 66 PILEILLRREEKL---------------KKNQVGAIVITPTRELAIQIDEVLSHFTKHFP 110
Query: 291 NVRVVPIVGGMST-EKQERLLKARPELVVGTPGRLWELMSGGEKHL---VELHTLSFFVL 346
+ +GG + E ER + ++V TPGRL ++ + L + +L VL
Sbjct: 111 QFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASYVKSLDVLVL 170
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
DEADR+++ G + +I++ LP + + QTQ
Sbjct: 171 DEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQ 207
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 258 (95.9 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 61/153 (39%), Positives = 95/153 (62%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D+IG A+TGSGKT+AF LP+ + ++++R LEE GE G + A+I+TPTR
Sbjct: 411 DLIGIAKTGSGKTIAFLLPMFRHIMDQRS-----LEE-GE--------GPI-AVIMTPTR 455
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELALQ+T K+ +K + +RVV + GG +Q LK E++V TPGR+ ++++
Sbjct: 456 ELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSG 515
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+ L +++ VLDEADRM + G ++ I+D
Sbjct: 516 RVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVD 548
Score = 141 (54.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 38/98 (38%), Positives = 59/98 (60%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W + + ++ S+ + G+++PTPIQ IPA G+ D+IG A+TGSGKT+AF LP+
Sbjct: 373 SWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIM-SGR-DLIGIAKTGSGKTIAFLLPM 430
Query: 234 MQRLLEEREKAGKMLEE-KGEEAEKYAPKGHLRALIIT 270
+ ++++R LEE +G A P L AL IT
Sbjct: 431 FRHIMDQRS-----LEEGEGPIAVIMTPTREL-ALQIT 462
Score = 40 (19.1 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 393 RKKRQTLVFSATI--ALSADFRKKL 415
R RQT++FSAT A+ A R+ L
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRIL 575
Score = 38 (18.4 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 14 KETKPNRRKRTRKSREAEK 32
+ ++ RKR R+SR E+
Sbjct: 58 RRSRSRDRKRLRRSRSRER 76
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 258 (95.9 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 61/153 (39%), Positives = 95/153 (62%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D+IG A+TGSGKT+AF LP+ + ++++R LEE GE G + A+I+TPTR
Sbjct: 411 DLIGIAKTGSGKTIAFLLPMFRHIMDQRS-----LEE-GE--------GPI-AVIMTPTR 455
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELALQ+T K+ +K + +RVV + GG +Q LK E++V TPGR+ ++++
Sbjct: 456 ELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSG 515
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+ L +++ VLDEADRM + G ++ I+D
Sbjct: 516 RVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVD 548
Score = 141 (54.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 38/98 (38%), Positives = 59/98 (60%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W + + ++ S+ + G+++PTPIQ IPA G+ D+IG A+TGSGKT+AF LP+
Sbjct: 373 SWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIM-SGR-DLIGIAKTGSGKTIAFLLPM 430
Query: 234 MQRLLEEREKAGKMLEE-KGEEAEKYAPKGHLRALIIT 270
+ ++++R LEE +G A P L AL IT
Sbjct: 431 FRHIMDQRS-----LEEGEGPIAVIMTPTREL-ALQIT 462
Score = 40 (19.1 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 393 RKKRQTLVFSATI--ALSADFRKKL 415
R RQT++FSAT A+ A R+ L
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRIL 575
Score = 38 (18.4 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 14 KETKPNRRKRTRKSREAEK 32
+ ++ RKR R+SR E+
Sbjct: 58 RRSRSRDRKRLRRSRSRER 76
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 258 (95.9 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 61/153 (39%), Positives = 95/153 (62%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D+IG A+TGSGKT+AF LP+ + ++++R LEE GE G + A+I+TPTR
Sbjct: 411 DLIGIAKTGSGKTIAFLLPMFRHIMDQRS-----LEE-GE--------GPI-AVIMTPTR 455
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELALQ+T K+ +K + +RVV + GG +Q LK E++V TPGR+ ++++
Sbjct: 456 ELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSG 515
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+ L +++ VLDEADRM + G ++ I+D
Sbjct: 516 RVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVD 548
Score = 141 (54.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 38/98 (38%), Positives = 59/98 (60%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W + + ++ S+ + G+++PTPIQ IPA G+ D+IG A+TGSGKT+AF LP+
Sbjct: 373 SWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIM-SGR-DLIGIAKTGSGKTIAFLLPM 430
Query: 234 MQRLLEEREKAGKMLEE-KGEEAEKYAPKGHLRALIIT 270
+ ++++R LEE +G A P L AL IT
Sbjct: 431 FRHIMDQRS-----LEEGEGPIAVIMTPTREL-ALQIT 462
Score = 40 (19.1 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 393 RKKRQTLVFSATI--ALSADFRKKL 415
R RQT++FSAT A+ A R+ L
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRIL 575
Score = 38 (18.4 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 14 KETKPNRRKRTRKSREAEK 32
+ ++ RKR R+SR E+
Sbjct: 58 RRSRSRDRKRLRRSRSRER 76
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 258 (95.9 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 61/153 (39%), Positives = 95/153 (62%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D+IG A+TGSGKT+AF LP+ + ++++R LEE GE G + A+I+TPTR
Sbjct: 411 DLIGIAKTGSGKTIAFLLPMFRHIMDQRS-----LEE-GE--------GPI-AVIMTPTR 455
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELALQ+T K+ +K + +RVV + GG +Q LK E++V TPGR+ ++++
Sbjct: 456 ELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSG 515
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+ L +++ VLDEADRM + G ++ I+D
Sbjct: 516 RVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVD 548
Score = 141 (54.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 38/98 (38%), Positives = 59/98 (60%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W + + ++ S+ + G+++PTPIQ IPA G+ D+IG A+TGSGKT+AF LP+
Sbjct: 373 SWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIM-SGR-DLIGIAKTGSGKTIAFLLPM 430
Query: 234 MQRLLEEREKAGKMLEE-KGEEAEKYAPKGHLRALIIT 270
+ ++++R LEE +G A P L AL IT
Sbjct: 431 FRHIMDQRS-----LEEGEGPIAVIMTPTREL-ALQIT 462
Score = 40 (19.1 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 393 RKKRQTLVFSATI--ALSADFRKKL 415
R RQT++FSAT A+ A R+ L
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRIL 575
Score = 38 (18.4 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 14 KETKPNRRKRTRKSREAEK 32
+ ++ RKR R+SR E+
Sbjct: 58 RRSRSRDRKRLRRSRSRER 76
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 258 (95.9 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 61/153 (39%), Positives = 95/153 (62%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D+IG A+TGSGKT+AF LP+ + ++++R LEE GE G + A+I+TPTR
Sbjct: 411 DLIGIAKTGSGKTIAFLLPMFRHIMDQRS-----LEE-GE--------GPI-AVIMTPTR 455
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELALQ+T K+ +K + +RVV + GG +Q LK E++V TPGR+ ++++
Sbjct: 456 ELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSG 515
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+ L +++ VLDEADRM + G ++ I+D
Sbjct: 516 RVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVD 548
Score = 141 (54.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 38/98 (38%), Positives = 59/98 (60%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W + + ++ S+ + G+++PTPIQ IPA G+ D+IG A+TGSGKT+AF LP+
Sbjct: 373 SWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIM-SGR-DLIGIAKTGSGKTIAFLLPM 430
Query: 234 MQRLLEEREKAGKMLEE-KGEEAEKYAPKGHLRALIIT 270
+ ++++R LEE +G A P L AL IT
Sbjct: 431 FRHIMDQRS-----LEEGEGPIAVIMTPTREL-ALQIT 462
Score = 40 (19.1 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 393 RKKRQTLVFSATI--ALSADFRKKL 415
R RQT++FSAT A+ A R+ L
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRIL 575
Score = 38 (18.4 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 14 KETKPNRRKRTRKSREAEK 32
+ ++ RKR R+SR E+
Sbjct: 58 RRSRSRDRKRLRRSRSRER 76
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 258 (95.9 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 61/153 (39%), Positives = 95/153 (62%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D+IG A+TGSGKT+AF LP+ + ++++R LEE GE G + A+I+TPTR
Sbjct: 411 DLIGIAKTGSGKTIAFLLPMFRHIMDQRS-----LEE-GE--------GPI-AVIMTPTR 455
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELALQ+T K+ +K + +RVV + GG +Q LK E++V TPGR+ ++++
Sbjct: 456 ELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSG 515
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+ L +++ VLDEADRM + G ++ I+D
Sbjct: 516 RVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVD 548
Score = 141 (54.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 38/98 (38%), Positives = 59/98 (60%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W + + ++ S+ + G+++PTPIQ IPA G+ D+IG A+TGSGKT+AF LP+
Sbjct: 373 SWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIM-SGR-DLIGIAKTGSGKTIAFLLPM 430
Query: 234 MQRLLEEREKAGKMLEE-KGEEAEKYAPKGHLRALIIT 270
+ ++++R LEE +G A P L AL IT
Sbjct: 431 FRHIMDQRS-----LEEGEGPIAVIMTPTREL-ALQIT 462
Score = 40 (19.1 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 393 RKKRQTLVFSATI--ALSADFRKKL 415
R RQT++FSAT A+ A R+ L
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRIL 575
Score = 38 (18.4 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 14 KETKPNRRKRTRKSREAEK 32
+ ++ RKR R+SR E+
Sbjct: 58 RRSRSRDRKRLRRSRSRER 76
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 258 (95.9 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 61/153 (39%), Positives = 95/153 (62%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D+IG A+TGSGKT+AF LP+ + ++++R LEE GE G + A+I+TPTR
Sbjct: 411 DLIGIAKTGSGKTIAFLLPMFRHIMDQRS-----LEE-GE--------GPI-AVIMTPTR 455
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELALQ+T K+ +K + +RVV + GG +Q LK E++V TPGR+ ++++
Sbjct: 456 ELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSG 515
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+ L +++ VLDEADRM + G ++ I+D
Sbjct: 516 RVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVD 548
Score = 141 (54.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 38/98 (38%), Positives = 59/98 (60%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W + + ++ S+ + G+++PTPIQ IPA G+ D+IG A+TGSGKT+AF LP+
Sbjct: 373 SWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIM-SGR-DLIGIAKTGSGKTIAFLLPM 430
Query: 234 MQRLLEEREKAGKMLEE-KGEEAEKYAPKGHLRALIIT 270
+ ++++R LEE +G A P L AL IT
Sbjct: 431 FRHIMDQRS-----LEEGEGPIAVIMTPTREL-ALQIT 462
Score = 40 (19.1 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 393 RKKRQTLVFSATI--ALSADFRKKL 415
R RQT++FSAT A+ A R+ L
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRIL 575
Score = 38 (18.4 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 14 KETKPNRRKRTRKSREAEK 32
+ ++ RKR R+SR E+
Sbjct: 58 RRSRSRDRKRLRRSRSRER 76
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 253 (94.1 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 69/213 (32%), Positives = 110/213 (51%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
VS + + +NE P +M+++ R G+ +PTP+QK IP D++ A+TG
Sbjct: 129 VSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLL--ANRDLMSCAQTG 186
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLE-EKGEEAEKYAPKGHLRALIITPTRELALQVTD 281
SGKT AF LPI+Q +L K G Y P AL+++PTRELA+Q+
Sbjct: 187 SGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRT--YYPC----ALVLSPTRELAIQIHK 240
Query: 282 HLKEVAKGINVRVVPIVGGMSTEK-QERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 340
+ + N++ + GG + Q L+A +++ TPGRL +++ G + L
Sbjct: 241 EATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQG---FIGLAG 297
Query: 341 LSFFVLDEADRMIENGHFRELQSIID--MLPMT 371
+ VLDEADRM++ G +++ I+ M P T
Sbjct: 298 CRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKT 330
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 255 (94.8 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 73/228 (32%), Positives = 120/228 (52%)
Query: 146 EESVTVSNGPDDAEEELVSEAE---ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
E+ TV N +A E++ E + + + E+ L L +I R + +PTP+Q+
Sbjct: 118 EQENTVINF--EAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRN 175
Query: 203 CIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG 262
IP A G+ D++ A+TGSGKT AF PI+ +++++ E+ P
Sbjct: 176 AIPILA-AGR-DLMACAQTGSGKTAAFCFPIISGIMKDQHI------ERPRGVRGVYPL- 226
Query: 263 HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPG 322
A+I++PTRELA Q+ D ++ + V+VV GG +Q R L+ +++V TPG
Sbjct: 227 ---AVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPG 283
Query: 323 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
RL +L+ G V L + F LDEADRM++ G +++ I+ + M
Sbjct: 284 RLNDLLERGR---VSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDM 328
Score = 37 (18.1 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 7/9 (77%), Positives = 9/9 (100%)
Query: 396 RQTLVFSAT 404
RQT++FSAT
Sbjct: 334 RQTMLFSAT 342
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 252 (93.8 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 68/217 (31%), Positives = 114/217 (52%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
DD E + ++++++ + ++M +I + PTP+QK IP K D+
Sbjct: 140 DDIPVEATG-SNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKE--KRDL 196
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAP-KGHLRALIITPTRE 274
+ A+TGSGKT AF LPI+ ++ + G L +Y K + +L++ PTRE
Sbjct: 197 MACAQTGSGKTAAFLLPILSQIYADGP--GDALRAMKATNGRYGRRKQYPISLVLAPTRE 254
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA+Q+ + ++ A VR + GG +Q R L+ L+V TPGRL ++M G+
Sbjct: 255 LAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-- 312
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSII--DMLP 369
+ L + VLDEADRM++ G +++ I+ D +P
Sbjct: 313 -IGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMP 348
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 176 (67.0 bits), Expect = 9.0e-19, Sum P(3) = 9.0e-19
Identities = 42/106 (39%), Positives = 66/106 (62%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
+AL+I PTRELA QV ++ +A+ N++V+ + GG+S Q L+ ++VGTPGR
Sbjct: 76 QALVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQIASLEHGAHIIVGTPGR 135
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ + + G L L+TL VLDEADRM++ G + ++ II+ P
Sbjct: 136 IQQHLRKGSLVLDGLNTL---VLDEADRMLDMGFYDAIEDIIEKTP 178
Score = 117 (46.2 bits), Expect = 9.0e-19, Sum P(3) = 9.0e-19
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
++T A+N L L P ++ ++ LG+ + TPIQ +P +G +D+I A+TGSGKT
Sbjct: 1 MTTIATAFNTLPLSPAMLANLDSLGYAQMTPIQAQSLPVIL-KG-MDLIAQAKTGSGKTA 58
Query: 228 AFGLPIM 234
AFG+ ++
Sbjct: 59 AFGIGLL 65
Score = 41 (19.5 bits), Expect = 9.0e-19, Sum P(3) = 9.0e-19
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 395 KRQTLVFSAT 404
+RQTL+FSAT
Sbjct: 180 RRQTLLFSAT 189
>WB|WBGene00001600 [details] [associations]
symbol:glh-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 250 (93.1 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 78/246 (31%), Positives = 127/246 (51%)
Query: 157 DAEEELVSEAEIST--EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
DA +LVS + T ++++ + + +++ R G+ TPIQ+ +P A GK D
Sbjct: 280 DASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVA-DGK-D 337
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
I+ A+TGSGKT AF LPIM RL+ E++ G E Y P R +I+TPTRE
Sbjct: 338 ILACAQTGSGKTAAFLLPIMSRLILEKDL------NYGAEGGCY-P----RCIILTPTRE 386
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA Q+ + ++ + + + P+ GG++ + + ++VGT GR+ G
Sbjct: 387 LADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGA-- 444
Query: 335 LVELHTLSFFVLDEADRMIEN-GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 393
++L + VLDEADRMI++ G E++ II+ M N+ + + SS+Q
Sbjct: 445 -IKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPK--NDKRQTMMFSATFPSSVQE 501
Query: 394 KKRQTL 399
R+ L
Sbjct: 502 AARKLL 507
Score = 44 (20.5 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 395 KRQTLVFSATIALSA-DFRKKL 415
KRQT++FSAT S + +KL
Sbjct: 485 KRQTMMFSATFPSSVQEAARKL 506
>UNIPROTKB|O01836 [details] [associations]
symbol:glh-3 "ATP-dependent RNA helicase glh-3"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 250 (93.1 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 78/246 (31%), Positives = 127/246 (51%)
Query: 157 DAEEELVSEAEIST--EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
DA +LVS + T ++++ + + +++ R G+ TPIQ+ +P A GK D
Sbjct: 280 DASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVA-DGK-D 337
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
I+ A+TGSGKT AF LPIM RL+ E++ G E Y P R +I+TPTRE
Sbjct: 338 ILACAQTGSGKTAAFLLPIMSRLILEKDL------NYGAEGGCY-P----RCIILTPTRE 386
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA Q+ + ++ + + + P+ GG++ + + ++VGT GR+ G
Sbjct: 387 LADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGA-- 444
Query: 335 LVELHTLSFFVLDEADRMIEN-GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 393
++L + VLDEADRMI++ G E++ II+ M N+ + + SS+Q
Sbjct: 445 -IKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPK--NDKRQTMMFSATFPSSVQE 501
Query: 394 KKRQTL 399
R+ L
Sbjct: 502 AARKLL 507
Score = 44 (20.5 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 395 KRQTLVFSATIALSA-DFRKKL 415
KRQT++FSAT S + +KL
Sbjct: 485 KRQTMMFSATFPSSVQEAARKL 506
>UNIPROTKB|F6WLT2 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
IPI:IPI00643815 SMR:F6WLT2 Ensembl:ENST00000414088
Ensembl:ENST00000417558 Ensembl:ENST00000427214
Ensembl:ENST00000435182 Ensembl:ENST00000438449
Ensembl:ENST00000439927 Ensembl:ENST00000455916 Uniprot:F6WLT2
Length = 289
Score = 170 (64.9 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 43/111 (38%), Positives = 63/111 (56%)
Query: 262 GHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKAR-PELVVG 319
G + L++ TRELA Q++ + +K + NV+V GG+S +K E +LK P +VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR-ELQSIIDMLP 369
TPGR+ L K L L + F+LDE D+M+E R ++Q I M P
Sbjct: 172 TPGRILALARN--KSL-NLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTP 219
Score = 116 (45.9 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 30/95 (31%), Positives = 52/95 (54%)
Query: 146 EESVTVSNGPDDAE---EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
++ V + G D AE ++ V + +S + + L P L+++I GF+ P+ +Q
Sbjct: 15 DDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 203 CIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
CIP A G +D++ A++G GKT F L +Q+L
Sbjct: 75 CIPQAI-LG-MDVLCQAKSGMGKTAVFVLATLQQL 107
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 184 (69.8 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 38/110 (34%), Positives = 76/110 (69%)
Query: 255 AEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARP 314
A K A K LRAL++TPTRELA+QV ++++ ++ + ++ + + GG + Q + ++
Sbjct: 64 AAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQGV 123
Query: 315 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 364
+++V TPGRL++++ G+ +L +L +++ V+DEADRM++ G R+++ +
Sbjct: 124 DILVATPGRLFDII--GQFNL-DLSSVTTLVIDEADRMLDLGFVRDIEKV 170
Score = 111 (44.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++ L L L+ +I G+++ T +Q+ IP A GK DI+ A+TG+GKT AF LP++
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLAL-VGK-DIMACAQTGTGKTAAFALPVL 60
Query: 235 QRL 237
++L
Sbjct: 61 EQL 63
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 184 (69.8 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 38/110 (34%), Positives = 76/110 (69%)
Query: 255 AEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARP 314
A K A K LRAL++TPTRELA+QV ++++ ++ + ++ + + GG + Q + ++
Sbjct: 64 AAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQGV 123
Query: 315 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 364
+++V TPGRL++++ G+ +L +L +++ V+DEADRM++ G R+++ +
Sbjct: 124 DILVATPGRLFDII--GQFNL-DLSSVTTLVIDEADRMLDLGFVRDIEKV 170
Score = 111 (44.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++ L L L+ +I G+++ T +Q+ IP A GK DI+ A+TG+GKT AF LP++
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLAL-VGK-DIMACAQTGTGKTAAFALPVL 60
Query: 235 QRL 237
++L
Sbjct: 61 EQL 63
>UNIPROTKB|J3QR64 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000581384
Uniprot:J3QR64
Length = 214
Score = 141 (54.7 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 31/86 (36%), Positives = 54/86 (62%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQ-KACIPAAAHQG 211
NGPD E E V E+ + D+++++ L L++ IY GF++P+ IQ +A +P +G
Sbjct: 23 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCI--KG 80
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRL 237
D+I A++G+GKT F + I+Q++
Sbjct: 81 -YDVIAQAQSGTGKTATFAISILQQI 105
Score = 138 (53.6 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 31/105 (29%), Positives = 58/105 (55%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ-ERLLKARPELVVGTPGR 323
+AL++ PTRELA Q+ + + + +GG + + ++L P ++VGTPGR
Sbjct: 113 QALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGR 172
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
++++++ ++L + + FVLDEAD M+ G ++ I L
Sbjct: 173 VFDMLN--RRYLSPKY-IKMFVLDEADEMLSRGFKDQIYDIFQKL 214
>DICTYBASE|DDB_G0292010 [details] [associations]
symbol:DDB_G0292010 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292010 GO:GO:0005524
EMBL:AAFI02000187 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
ProtClustDB:CLSZ2846571 RefSeq:XP_629765.1
ProteinModelPortal:Q54DV7 EnsemblProtists:DDB0184159 GeneID:8628441
KEGG:ddi:DDB_G0292010 InParanoid:Q54DV7 OMA:VESSCKP Uniprot:Q54DV7
Length = 777
Score = 241 (89.9 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 64/183 (34%), Positives = 102/183 (55%)
Query: 196 PTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE---ERE-KAGKM-LEE 250
PTP+Q C P G+ DI+ A+TGSGKTL + LP + +LE +R+ + +M ++E
Sbjct: 312 PTPVQSQCWPGIL-SGQ-DILSIAQTGSGKTLGYLLPAIPNILEHLRQRKIRRQQMTMQE 369
Query: 251 KGEEAEKYAPKGHLR----ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ 306
K E +K + LII PTRELA QV K + N+ + I GG+ +Q
Sbjct: 370 KLENKKKSKLLKNTNMGPMVLIIVPTRELAKQVESSCKPLRSKFNIHSIAIYGGVDANEQ 429
Query: 307 ERLL-KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 365
+ +L + E+++ TPGRL +L+ ++ + L + +LDEADRM++ G +LQ I
Sbjct: 430 KDILGQEHNEIIIATPGRLVDLIQRSKEVVGLLGGVGMLILDEADRMLQLGFGDQLQKIS 489
Query: 366 DML 368
+ +
Sbjct: 490 EQI 492
Score = 54 (24.1 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 388 VSSLQRKKRQTLVFSATIALSA-DFRKKLKHGSLKLKQSVNGLNSIET 434
+S R RQTL+FSAT + D KK LK++ + N T
Sbjct: 488 ISEQIRPDRQTLMFSATFPQTMQDAAKKWLTNPLKIRVKSSSTNQGST 535
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 164 (62.8 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPG 322
++AL++ PTRELA QV L+ +A+ N++++ I GG+ Q L+ +V+GTPG
Sbjct: 73 VQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGAHVVIGTPG 132
Query: 323 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
RL + + G L L TL VLDEADRM++ G ++ ++I P
Sbjct: 133 RLLDHLRRGSLDLSALRTL---VLDEADRMLDMGFQDDISALIAAAP 176
Score = 126 (49.4 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
A++ LRL +++++ LG+ E TPIQ +P GK D+I A+TGSGKT AFG+ +
Sbjct: 5 AFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLIL-AGK-DVIARAKTGSGKTAAFGIGL 62
Query: 234 MQRL 237
+ RL
Sbjct: 63 LSRL 66
Score = 44 (20.5 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 9/10 (90%), Positives = 10/10 (100%)
Query: 395 KRQTLVFSAT 404
KRQTL+FSAT
Sbjct: 178 KRQTLLFSAT 187
>MGI|MGI:1915098 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915098 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:AK129402
EMBL:AK033741 EMBL:AK154422 EMBL:BC117786 EMBL:BC117787
IPI:IPI00453808 RefSeq:NP_080685.2 UniGene:Mm.281601
ProteinModelPortal:Q6ZPL9 SMR:Q6ZPL9 IntAct:Q6ZPL9 STRING:Q6ZPL9
PRIDE:Q6ZPL9 Ensembl:ENSMUST00000071057 GeneID:67848 KEGG:mmu:67848
UCSC:uc008zqc.2 InParanoid:Q6ZPL9 NextBio:325707 Bgee:Q6ZPL9
CleanEx:MM_DDX55 Genevestigator:Q6ZPL9
GermOnline:ENSMUSG00000029389 Uniprot:Q6ZPL9
Length = 600
Score = 249 (92.7 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 73/217 (33%), Positives = 110/217 (50%)
Query: 174 AWNELR--LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
AW L+ LHP ++ ++ LGF TP+Q A IP + K D+ A TGSGKTLAF +
Sbjct: 8 AWESLQVPLHPRVLGALRELGFPHMTPVQSATIPLFM-KNK-DVAAEAVTGSGKTLAFVI 65
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI- 290
PI++ LL EK K + A++ITPTRELA+Q+ + L K
Sbjct: 66 PILEILLRREEKL---------------KKNQVGAIVITPTRELAIQIDEVLSHFTKHFP 110
Query: 291 NVRVVPIVGGMST-EKQERLLKARPELVVGTPGRLWELMSGGEKHLVE---LHTLSFFVL 346
+ +GG + E ER + ++V TPGRL ++ + L + +L VL
Sbjct: 111 QFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVL 170
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
DEADR+++ G + +I++ LP + + QTQ
Sbjct: 171 DEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQ 207
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 253 (94.1 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 61/153 (39%), Positives = 93/153 (60%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D+IG A+TGSGKT+AF LP+ + +L++R G EAE G L A+I+TPTR
Sbjct: 396 DLIGIAKTGSGKTIAFLLPMFRHILDQRP-VG--------EAE-----GPL-AVIMTPTR 440
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELALQ+T K+ +K + +RVV + GG +Q LK E++V TPGR+ +++
Sbjct: 441 ELALQITKECKKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNG 500
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+ L +++ V+DEADRM + G ++ I+D
Sbjct: 501 RVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVD 533
Score = 133 (51.9 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 40/110 (36%), Positives = 63/110 (57%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W + + ++ ++ + +++PTPIQ IPA G+ D+IG A+TGSGKT+AF LP+
Sbjct: 359 WVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIM-SGR-DLIGIAKTGSGKTIAFLLPMF 416
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP-----TRELALQV 279
+ +L++R G E +G A P L AL IT ++ LAL+V
Sbjct: 417 RHILDQRP-VG---EAEGPLAVIMTPTREL-ALQITKECKKFSKSLALRV 461
Score = 39 (18.8 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 393 RKKRQTLVFSAT 404
R RQT++FSAT
Sbjct: 536 RPDRQTVMFSAT 547
Score = 38 (18.4 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 11 EHSKETKPNRRKRTRKSREAEKLNSLKWNSSFSAADN 47
E ++ + +R +R +SRE + S S +N
Sbjct: 59 ERKRQRRSSRDRRRSRSRERRRSKSRSRGRSKEKPEN 95
Score = 37 (18.1 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 153 NGPDDAEEELVSEAEISTEFD 173
+G D+ E++ +EAE S +
Sbjct: 185 DGDDEEEQDKAAEAEESERME 205
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 188 (71.2 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 50/155 (32%), Positives = 83/155 (53%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
D++G A TGSGKTL++ LP + + A +L AP L++ PTR
Sbjct: 152 DMVGIAATGSGKTLSYCLPGIVHI-----NAQPLL----------APGDGPIVLVLAPTR 196
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELA+Q+ + +R + GG+ +Q R L E+V+ TPGRL +++ G+
Sbjct: 197 ELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKT 256
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
+L + ++ VLDEADRM++ G +++ I+D +
Sbjct: 257 NLKRV---TYLVLDEADRMLDMGFEPQIRKIVDQI 288
Score = 93 (37.8 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 159 EEEL-VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIG 217
E E+ +S +I ++E ++ + GF +PT IQ P A G+ D++G
Sbjct: 98 ENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMAL-SGR-DMVG 155
Query: 218 AAETGSGKTLAFGLP 232
A TGSGKTL++ LP
Sbjct: 156 IAATGSGKTLSYCLP 170
Score = 52 (23.4 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 393 RKKRQTLVFSATIA-----LSADFRK---KLKHGSLKLKQSVNGLNSIETLSE 437
R RQTL++SAT L+AD+ +++ GSL+L S N +E +S+
Sbjct: 289 RPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSD 341
Score = 37 (18.1 bits), Expect = 6.4e-17, Sum P(3) = 6.4e-17
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 392 QRKKRQTLVFSATIALSADFRKKLK 416
Q + +TL+F++T + D K L+
Sbjct: 357 QDNEYKTLIFASTKRMCDDITKYLR 381
>UNIPROTKB|F8VQ10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:NAENPAI EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 HGNC:HGNC:13917
ChiTaRS:DDX39B EMBL:CR942185 IPI:IPI01025218 SMR:F8VQ10
Ensembl:ENST00000417556 Ensembl:ENST00000547039
Ensembl:ENST00000547489 Ensembl:ENST00000548340
Ensembl:ENST00000548614 Ensembl:ENST00000550217
Ensembl:ENST00000552288 Uniprot:F8VQ10
Length = 443
Score = 245 (91.3 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 74/230 (32%), Positives = 119/230 (51%)
Query: 146 EESVTVSNGPDDAE---EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
++ V + G D AE ++ V + +S + + L P L+++I GF+ P+ +Q
Sbjct: 15 DDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 203 CIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG 262
CIP A G +D++ A++G GKT F L +Q+L G++ G +
Sbjct: 75 CIPQAI-LG-MDVLCQAKSGMGKTAVFVLATLQQL---EPVTGQVY--LGRVLGRGFWCV 127
Query: 263 HLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKAR-PELVVGT 320
+ L++ TRELA Q++ + +K + NV+V GG+S +K E +LK P +VVGT
Sbjct: 128 FVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 187
Query: 321 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR-ELQSIIDMLP 369
PGR+ L K L L + F+LDE D+M+E R ++Q I M P
Sbjct: 188 PGRILALARN--KSL-NLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTP 234
>FB|FBgn0052344 [details] [associations]
symbol:CG32344 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:AE014296
GO:GO:0022008 GO:GO:0006200 GO:GO:0003723 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14808
GeneTree:ENSGT00550000075100 HSSP:P10081 EMBL:AY075397
RefSeq:NP_612028.4 UniGene:Dm.796 SMR:Q8SY39 IntAct:Q8SY39
STRING:Q8SY39 EnsemblMetazoa:FBtr0072576 GeneID:326208
KEGG:dme:Dmel_CG32344 UCSC:CG32344-RA FlyBase:FBgn0052344
InParanoid:Q8SY39 OMA:NANDEMS OrthoDB:EOG40CFZ4 GenomeRNAi:326208
NextBio:847633 Uniprot:Q8SY39
Length = 827
Score = 179 (68.1 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 40/117 (34%), Positives = 68/117 (58%)
Query: 253 EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKA 312
E+ ++ P RALI++PTRELA+Q +KE+ + + ++ + ++GG S + Q +
Sbjct: 99 EKLQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHT 158
Query: 313 RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
P+++V TPGR L E L +L+++ + V DEADR+ E G +L + LP
Sbjct: 159 CPDVIVATPGRFLHLCV--EMDL-KLNSIEYVVFDEADRLFEMGFGEQLNETLHRLP 212
Score = 124 (48.7 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 29/89 (32%), Positives = 49/89 (55%)
Query: 154 GPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKV 213
G D +++ + + + L L+K I + G+K PTPIQ+ IP +G+
Sbjct: 20 GTSDRGADILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVPTPIQRKTIPLIL-EGR- 77
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEERE 242
D++ A+TGSGKT F +P+ ++L + RE
Sbjct: 78 DVVAMAKTGSGKTACFLIPLFEKL-QRRE 105
Score = 39 (18.8 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 396 RQTLVFSATIA-LSADFRK 413
RQT++FSAT+ L +F +
Sbjct: 215 RQTVMFSATLPKLLVEFAR 233
Score = 38 (18.4 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 8/39 (20%), Positives = 19/39 (48%)
Query: 359 RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 397
+ L+ P+ + E + T++ VS+ +RK ++
Sbjct: 474 KPLEDFFTAAPVLAQAAEASGQSTESQAKVSAAERKLQE 512
>DICTYBASE|DDB_G0280407 [details] [associations]
symbol:ddx56 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IEA;ISS]
[GO:0000027 "ribosomal large subunit assembly" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0280407 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR GO:GO:0003723 EMBL:AAFI02000036
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0000027 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14810 HSSP:P10081 RefSeq:XP_641158.1
STRING:Q54VF1 EnsemblProtists:DDB0234216 GeneID:8622538
KEGG:ddi:DDB_G0280407 OMA:CARETEM ProtClustDB:CLSZ2730700
Uniprot:Q54VF1
Length = 685
Score = 249 (92.7 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 70/220 (31%), Positives = 121/220 (55%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
N +++ E+ VS I E + + L +++++ ++GF+ P+ +Q IP + QGK
Sbjct: 4 NKNNNSVEDSVSSDLIDLEC-TFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSL-QGK 61
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
DI+ A TGSGKT A+ +PI+Q++L +EK+ KG ++A+++ PT
Sbjct: 62 -DILAKARTGSGKTAAYSIPIIQKVLMAKEKSNI--------------KG-VKAVVLVPT 105
Query: 273 RELALQVTDHLKEVAKGIN--VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 330
REL QV +H +V+ V VV + + ++Q+ LL+ P+++V TP RL + +
Sbjct: 106 RELCEQVKNHFNQVSYYCQQLVSVVQLGNDKTLDEQKGLLRDIPDVIVSTPTRLVQHL-- 163
Query: 331 GEKHLVELH-TLSFFVLDEADRMIENGHFRELQSIIDMLP 369
E ++L TL V+DEAD ++ GH ++ I LP
Sbjct: 164 -ENKTIQLQSTLDILVIDEADLVLNYGHQNDINIIKSFLP 202
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 172 (65.6 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 35/107 (32%), Positives = 61/107 (57%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
+ALI+ PTRELA Q+ + + +N+ +GG S + L+ P++VVGTPGR+
Sbjct: 93 QALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKALQDGPQVVVGTPGRV 152
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 371
+++ ++ ++ + FVLDEAD M+ G ++ I +LP +
Sbjct: 153 HDMI---QRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQLLPQS 196
Score = 119 (46.9 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 27/85 (31%), Positives = 50/85 (58%)
Query: 154 GPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQ-KACIPAAAHQGK 212
G +D E + E+ D+++E+ L L++ IY GF+ P+ IQ +A +P +G
Sbjct: 5 GLEDVPEGQI-ESNYDETVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVI--KGH 61
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRL 237
D+I A++G+GKT F + ++Q++
Sbjct: 62 -DVIAQAQSGTGKTATFSISVLQKI 85
>UNIPROTKB|G3V0G3 [details] [associations]
symbol:DDX56 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 56,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
EMBL:CH471128 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 EMBL:AC004938
UniGene:Hs.654762 HGNC:HGNC:18193 ProteinModelPortal:G3V0G3
SMR:G3V0G3 Ensembl:ENST00000421223 ArrayExpress:G3V0G3 Bgee:G3V0G3
Uniprot:G3V0G3
Length = 375
Score = 241 (89.9 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 65/198 (32%), Positives = 111/198 (56%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P L++++ LG+ PT IQ+ IP A +GK D++ A TGSGKT A+ +P++
Sbjct: 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLAL-EGK-DLLARARTGSGKTAAYAIPML 66
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK--GINV 292
Q LL R+ G ++E+ +R L++ PT+ELA Q ++++A +V
Sbjct: 67 QLLLH-RKATGPVVEQA------------VRGLVLVPTKELARQAQSMIQQLATYCARDV 113
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH-TLSFFVLDEADR 351
RV + + Q +L +P++VVGTP R+ +S ++ ++L +L V+DEAD
Sbjct: 114 RVANVSAAEDSVSQRAVLMEKPDVVVGTPSRI---LSHLQQDSLKLRDSLELLVVDEADL 170
Query: 352 MIENGHFRELQSIIDMLP 369
+ G EL+S++ LP
Sbjct: 171 LFSFGFEEELKSLLCHLP 188
>UNIPROTKB|F8VZL8 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:CR753892 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 EMBL:BX001040
EMBL:BX248516 EMBL:BX927320 EMBL:CR753820 EMBL:CR753864
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185 IPI:IPI00643815
SMR:F8VZL8 Ensembl:ENST00000546633 Ensembl:ENST00000546637
Ensembl:ENST00000548331 Ensembl:ENST00000549374
Ensembl:ENST00000550435 Ensembl:ENST00000551031 Uniprot:F8VZL8
Length = 323
Score = 170 (64.9 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 43/111 (38%), Positives = 63/111 (56%)
Query: 262 GHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKAR-PELVVG 319
G + L++ TRELA Q++ + +K + NV+V GG+S +K E +LK P +VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR-ELQSIIDMLP 369
TPGR+ L K L L + F+LDE D+M+E R ++Q I M P
Sbjct: 172 TPGRILALARN--KSL-NLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTP 219
Score = 116 (45.9 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 30/95 (31%), Positives = 52/95 (54%)
Query: 146 EESVTVSNGPDDAE---EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
++ V + G D AE ++ V + +S + + L P L+++I GF+ P+ +Q
Sbjct: 15 DDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 203 CIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
CIP A G +D++ A++G GKT F L +Q+L
Sbjct: 75 CIPQAI-LG-MDVLCQAKSGMGKTAVFVLATLQQL 107
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 175 (66.7 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 60/210 (28%), Positives = 102/210 (48%)
Query: 256 EKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARP 314
EK P + ++A+I+ PTRELALQ + KE++K +N++V+ GG S L
Sbjct: 184 EKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPV 243
Query: 315 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 374
L+VGTPGR+ +L G + L + V+DEAD+++ L+ +I LP +
Sbjct: 244 HLLVGTPGRILDLTKKG---VCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQ---N 297
Query: 375 NEGQSEQTQTCVTVSSLQ-RKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIE 433
+ VTV + + R R+ V + L+ + ++ +Q V+ LN
Sbjct: 298 RQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLTL-MGVTQYYAFVEERQKVHCLN--- 353
Query: 434 TLSERAGMRANVAIVDLTN-VSVLANKLEE 462
TL + + ++ + N V +LA K+ E
Sbjct: 354 TLFSKLQINQSIIFCNSVNRVELLAKKITE 383
Score = 119 (46.9 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
L+K IY GF++P+PIQ+ IP A G DI+ A+ G+GKT AF +P+++++
Sbjct: 135 LLKGIYEKGFEKPSPIQEESIPIAL-TGS-DILARAKNGTGKTGAFCIPVLEKI 186
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 247 (92.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 70/228 (30%), Positives = 113/228 (49%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
N DD + + + I +++ ++ L +L+ +I + +PTP+QK+ +P
Sbjct: 227 NAYDDDDISIETSEHICAPLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNR- 285
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL-RALIITP 271
D++ A+TGSGKT AF PI+ +L + + G P+ RAL++ P
Sbjct: 286 -DLMACAQTGSGKTAAFLFPIISGILLDGAPEAPPAYKPG------VPRAACPRALVLAP 338
Query: 272 TRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
TRELA Q+ D + + G V V I GG Q L +++V T GRL +L+ G
Sbjct: 339 TRELAQQIFDEANKFSYGSPVSSVVIYGGAEVFHQINELDRGCDILVATTGRLVDLLMRG 398
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQS 379
V L + + VLDEADRM++ G +++ II M G + Q+
Sbjct: 399 R---VSLSKIKYLVLDEADRMLDMGFEPQIRQIISEFDMP-GCRDRQT 442
Score = 43 (20.2 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 394 KKRQTLVFSATIA-----LSADF 411
+ RQTL+FSAT L+ADF
Sbjct: 438 RDRQTLMFSATFPKQIQNLAADF 460
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 177 (67.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 41/104 (39%), Positives = 65/104 (62%)
Query: 266 ALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
ALI+ PTRELA+Q+ KE+ G+ N+R V +VGG+ Q LK ++++ TPGRL
Sbjct: 280 ALILAPTRELAIQIERQAKELMAGLPNMRTVLLVGGLPLPPQLHRLKQSVKVIIATPGRL 339
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
E++ + V+LH + V+DE D M++ G F+ Q ++D+L
Sbjct: 340 LEIL---RQSSVQLHGIKIVVVDEVDTMLKMG-FQ--QQVLDIL 377
Score = 120 (47.3 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
L ++ G++ PTPIQ IP G+ DI+ +A+TGSGKT AF LP++ ++L E E
Sbjct: 220 LNSNLKNSGYEVPTPIQMQMIPVGL-LGR-DIVASADTGSGKTAAFLLPVIMKVLNETET 277
Query: 244 AGKML 248
++
Sbjct: 278 PSALI 282
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 173 (66.0 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 33/107 (30%), Positives = 62/107 (57%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
+ALI+ PTRELA Q+ + + +N++ +GG + L+ P++VVGTPGR+
Sbjct: 95 QALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDDMNALREGPQIVVGTPGRI 154
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 371
+++ ++ +++ + F+LDEAD M+ G ++ I +LP +
Sbjct: 155 HDMI---QRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQS 198
Score = 117 (46.2 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 156 DDAEEELVSEAEISTEFD----AWNELRLHPLLMKSIYRLGFKEPTPIQ-KACIPAAAHQ 210
D EE + +++I + +D +++ + L P L++ +Y GF+ P+ IQ +A +P +
Sbjct: 5 DKGLEE-IPDSQIESNYDEITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIV--K 61
Query: 211 GKVDIIGAAETGSGKTLAFGLPIMQRL 237
G D+I A++G+GKT F + +Q+L
Sbjct: 62 GN-DVIAQAQSGTGKTATFSISALQKL 87
>SGD|S000002651 [details] [associations]
symbol:PRP28 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005681 "spliceosomal
complex" evidence=TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000354 "cis
assembly of pre-catalytic spliceosome" evidence=TAS] [GO:0005682
"U5 snRNP" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002651 GO:GO:0005524
GO:GO:0005737 EMBL:BK006938 GO:GO:0005681 GO:GO:0005682
GO:GO:0003676 EMBL:Z49701 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
RefSeq:NP_010529.3 GeneID:851830 KEGG:sce:YDR243C KO:K12858
HOGENOM:HOG000268796 OrthoDB:EOG4KPXK0 EMBL:X56934 PIR:A39624
RefSeq:NP_878065.3 ProteinModelPortal:P23394 SMR:P23394
DIP:DIP-6324N IntAct:P23394 MINT:MINT-599541 STRING:P23394
PaxDb:P23394 PeptideAtlas:P23394 EnsemblFungi:YDR243C
GeneID:1466436 KEGG:sce:YDR246W-A CYGD:YDR243c OMA:HEMNERD
NextBio:969715 Genevestigator:P23394 GermOnline:YDR243C
Uniprot:P23394
Length = 588
Score = 244 (91.0 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 71/200 (35%), Positives = 104/200 (52%)
Query: 175 WNELRLHP--LLMKSIYRLGFKEPTPIQKACIPAAAHQGKV-DIIGAAETGSGKTLAFGL 231
W EL + P LL I L F PTPIQ+ IP + + D +G A TGSGKTLAF +
Sbjct: 174 WEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVI 233
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK--- 288
PI+ ++ + + G PK ALI+ PTREL Q+ ++V K
Sbjct: 234 PILIKMSRSPPRPPSLKIIDG-------PK----ALILAPTRELVQQIQKETQKVTKIWS 282
Query: 289 ---GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+ +V+ IVGG S E+ L +++V TPGRL + + E HL+ + + V
Sbjct: 283 KESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSL---ENHLLVMKQVETLV 339
Query: 346 LDEADRMIENGHFRELQSII 365
LDEAD+MI+ G ++ +I+
Sbjct: 340 LDEADKMIDLGFEDQVTNIL 359
Score = 43 (20.2 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 376 EGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
E Q T V +++ RQTL+F+AT+
Sbjct: 352 EDQVTNILTKVDINADSAVNRQTLMFTATM 381
>UNIPROTKB|J3QL43 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584784
Uniprot:J3QL43
Length = 271
Score = 144 (55.7 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 32/93 (34%), Positives = 58/93 (62%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQ-KACI 204
++S + NGPD E E V E+ + D+++++ L L++ IY GF++P+ IQ +A +
Sbjct: 5 QDSRSRDNGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAIL 64
Query: 205 PAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
P +G D+I A++G+GKT F + I+Q++
Sbjct: 65 PCI--KG-YDVIAQAQSGTGKTATFAISILQQI 94
Score = 141 (54.7 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 38/119 (31%), Positives = 66/119 (55%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ-ERLLKARPELVVGTPGR 323
+AL++ PTRELA Q+ + + + +GG + + ++L P ++VGTPGR
Sbjct: 102 QALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGR 161
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT 382
++++++ ++L + + FVLDEAD M+ G F++ I D+ N SN Q E T
Sbjct: 162 VFDMLN--RRYLSPKY-IKMFVLDEADEMLSRG-FKD--QIYDIFQKLN-SNT-QEELT 212
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 184 (69.8 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 39/105 (37%), Positives = 64/105 (60%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
+AL++TPTRELA+QV + + + + ++ I G +Q+ LK + +VVGTPGR+
Sbjct: 74 QALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRV 133
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ + EK + L L + V+DEAD M+ G ++++IID LP
Sbjct: 134 LDHI---EKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELP 175
Score = 105 (42.0 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 186 KSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
+++ LG++ PT +Q IP A K D++ ++TGSGKT +FG+P+ + + E K
Sbjct: 17 RALTGLGYEHPTEVQGEVIPVALQ--KKDLVVKSQTGSGKTASFGIPLCEMVEWEENK 72
Score = 39 (18.8 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 7/11 (63%), Positives = 10/11 (90%)
Query: 395 KRQTLVFSATI 405
KR T++FSAT+
Sbjct: 177 KRMTMLFSATL 187
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 184 (69.8 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 39/105 (37%), Positives = 64/105 (60%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
+AL++TPTRELA+QV + + + + ++ I G +Q+ LK + +VVGTPGR+
Sbjct: 74 QALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRV 133
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ + EK + L L + V+DEAD M+ G ++++IID LP
Sbjct: 134 LDHI---EKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELP 175
Score = 105 (42.0 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 186 KSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
+++ LG++ PT +Q IP A K D++ ++TGSGKT +FG+P+ + + E K
Sbjct: 17 RALTGLGYEHPTEVQGEVIPVALQ--KKDLVVKSQTGSGKTASFGIPLCEMVEWEENK 72
Score = 39 (18.8 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 7/11 (63%), Positives = 10/11 (90%)
Query: 395 KRQTLVFSATI 405
KR T++FSAT+
Sbjct: 177 KRMTMLFSATL 187
>ASPGD|ASPL0000054998 [details] [associations]
symbol:AN0894 species:162425 "Emericella nidulans"
[GO:0000373 "Group II intron splicing" evidence=IEA] [GO:0034337
"RNA folding" evidence=IEA] [GO:0000372 "Group I intron splicing"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EnsemblFungi:CADANIAT00001763
HOGENOM:HOG000204197 OMA:DDEVPTH Uniprot:C8VUS9
Length = 641
Score = 242 (90.2 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 70/220 (31%), Positives = 116/220 (52%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPL-LMKSIYR-LGFKEPTPIQKACIPAAAHQ 210
N + + VS E+ T F E + P L++++ + + + T +Q+ I +
Sbjct: 60 NAVAENSSQNVSVEELPTRFAELGERNILPRNLVENLTKHMKLETMTEVQRRTILESVKG 119
Query: 211 GKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIIT 270
G D++ A+TG+GKT+AF +P++++LL +R +L+ K AP +RA++I+
Sbjct: 120 G--DMLAQAKTGTGKTVAFLIPVVEKLLGDRS----LLKTSYRNGRKIAPID-IRAIVIS 172
Query: 271 PTRELALQVTDHLKEVAKGINVRVVPIVGG-MSTEKQERLLKARPELVVGTPGRLWELMS 329
PTRELA Q+ K + ++V VGG M +L + ++V TPGRL +L++
Sbjct: 173 PTRELAEQIAVEAKRLVARTGLQVQVAVGGTMKRAALHQLQREGCHILVATPGRLKDLLT 232
Query: 330 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
V L+ FVLDEADR+++ G EL I LP
Sbjct: 233 DPTSG-VRAPKLNTFVLDEADRLLDEGFAPELMEIQHRLP 271
Score = 46 (21.3 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 9/11 (81%), Positives = 11/11 (100%)
Query: 396 RQTLVFSATIA 406
RQTL+FSAT+A
Sbjct: 278 RQTLMFSATVA 288
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 152 (58.6 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 43/99 (43%), Positives = 58/99 (58%)
Query: 181 HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEE 240
+P LMKSI + GF++PTPIQ P QG +D+IG A+TG+GKTL++ +P L +
Sbjct: 223 YPELMKSIKKAGFQKPTPIQSQAWPIVL-QG-IDLIGIAQTGTGKTLSYLMPGFIHLNSQ 280
Query: 241 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQV 279
GK + P G L++TPTRELALQV
Sbjct: 281 PVSRGK----------RNGP-G---MLVLTPTRELALQV 305
Score = 146 (56.5 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 37/105 (35%), Positives = 64/105 (60%)
Query: 267 LIITPTRELALQVTDHLKEVA-KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
L++TPTRELALQV + + KG+ + V I GG + + Q + + ++++ TPGRL
Sbjct: 293 LVLTPTRELALQVGAECSKYSYKGL--KSVCIYGGGNRKGQIQDIMKGVDIIIATPGRLN 350
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII-DMLP 369
+L + V L ++++ VLDEAD+M++ G ++ I+ D+ P
Sbjct: 351 DLQMN---NFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRP 392
>UNIPROTKB|Q5ZLN8 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AJ719696 IPI:IPI00590534 RefSeq:NP_001006185.1
UniGene:Gga.42731 ProteinModelPortal:Q5ZLN8 STRING:Q5ZLN8
PRIDE:Q5ZLN8 GeneID:416820 KEGG:gga:416820 InParanoid:Q5ZLN8
NextBio:20820225 Uniprot:Q5ZLN8
Length = 591
Score = 246 (91.7 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 77/224 (34%), Positives = 112/224 (50%)
Query: 167 EISTEFDAWNEL--RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSG 224
E TE W+ L L P +++++ LGF TP+Q A IP D+ A TGSG
Sbjct: 2 EAVTE-GGWSSLPVALSPGVLRALQDLGFDRMTPVQSATIPL--FMSNKDVAAEAVTGSG 58
Query: 225 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 284
KTLAF +PI++ LL EK KM + G A+IITPTRELA+Q+ + L
Sbjct: 59 KTLAFVIPILEILLRREEKLKKM--QVG-------------AIIITPTRELAIQIDEVLT 103
Query: 285 EVAKGI-NVRVVPIVGGMST-EKQERLLKARPELVVGTPGRLWELM---SGGEKHLVELH 339
K + ++GG + E E+ + ++V TPGRL +L + G +
Sbjct: 104 HFTKHFPKFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVK 163
Query: 340 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
+L VLDEADR+++ G L +I+ LP + + QTQ
Sbjct: 164 SLDVLVLDEADRLLDMGFESSLNAILAFLPKQRRTGLFSATQTQ 207
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 160 (61.4 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 39/106 (36%), Positives = 62/106 (58%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGIN-VRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
+AL++ PTRELALQV + ++ + V+PI GG S Q L+ ++VVGTPGR
Sbjct: 83 QALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGTPGR 142
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ + + E+ ++L + F VLDEAD M+ G +++ I+ P
Sbjct: 143 MIDHL---ERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETP 185
Score = 136 (52.9 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 25/61 (40%), Positives = 44/61 (72%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
+L++HP ++++I +G++ PT IQ A IPA G D++G A+TG+GKT AF +P++ +
Sbjct: 17 DLQIHPRVLRAIGDVGYESPTAIQAATIPALM-AGS-DVVGLAQTGTGKTAAFAIPMLSK 74
Query: 237 L 237
+
Sbjct: 75 I 75
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 152 (58.6 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 43/99 (43%), Positives = 58/99 (58%)
Query: 181 HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEE 240
+P LMKSI + GF++PTPIQ P QG +D+IG A+TG+GKTL++ +P L +
Sbjct: 232 YPELMKSIKKAGFQKPTPIQSQAWPIVL-QG-IDLIGIAQTGTGKTLSYLMPGFIHLNSQ 289
Query: 241 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQV 279
GK + P G L++TPTRELALQV
Sbjct: 290 PVSRGK----------RNGP-G---MLVLTPTRELALQV 314
Score = 146 (56.5 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 37/105 (35%), Positives = 64/105 (60%)
Query: 267 LIITPTRELALQVTDHLKEVA-KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
L++TPTRELALQV + + KG+ + V I GG + + Q + + ++++ TPGRL
Sbjct: 302 LVLTPTRELALQVGAECSKYSYKGL--KSVCIYGGGNRKGQIQDIMKGVDIIIATPGRLN 359
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII-DMLP 369
+L + V L ++++ VLDEAD+M++ G ++ I+ D+ P
Sbjct: 360 DLQMN---NFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRP 401
>UNIPROTKB|G3V6M5 [details] [associations]
symbol:Ddx56 "Protein Ddx56" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1303195
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:TFLMSAT GeneTree:ENSGT00550000074946 EMBL:CH473963
UniGene:Rn.39458 Ensembl:ENSRNOT00000006642 Uniprot:G3V6M5
Length = 546
Score = 245 (91.3 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 64/197 (32%), Positives = 109/197 (55%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P L++++ LG+ PT IQ+ IP A +GK D++ A TGSGKT A+ +P++
Sbjct: 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLAL-EGK-DLLARARTGSGKTAAYAIPML 66
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK--GINV 292
Q LL ++ G ++E+ +R L++ PT+ELA Q ++++A +V
Sbjct: 67 QLLLHKKA-TGPVMEQA------------VRGLVLVPTKELARQAQSMIQQLASYCARDV 113
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
RV + + Q +L +P++VVGTP R+ + +K+L +L V+DEAD +
Sbjct: 114 RVANVSAAEDSASQRAVLMEKPDVVVGTPSRILNHLQ--QKNLKLRDSLELLVVDEADLL 171
Query: 353 IENGHFRELQSIIDMLP 369
G EL+S++ LP
Sbjct: 172 FSFGFEDELKSLLCHLP 188
>FB|FBgn0037561 [details] [associations]
symbol:CG9630 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P10081 KO:K14809
GeneTree:ENSGT00550000074969 EMBL:AY051513 RefSeq:NP_649777.1
UniGene:Dm.1101 ProteinModelPortal:Q9VHU1 SMR:Q9VHU1 IntAct:Q9VHU1
STRING:Q9VHU1 PaxDb:Q9VHU1 PRIDE:Q9VHU1 EnsemblMetazoa:FBtr0081866
GeneID:40974 KEGG:dme:Dmel_CG9630 UCSC:CG9630-RA
FlyBase:FBgn0037561 InParanoid:Q9VHU1 OMA:CACVEYW OrthoDB:EOG4TDZ1Q
PhylomeDB:Q9VHU1 GenomeRNAi:40974 NextBio:821545 Bgee:Q9VHU1
GermOnline:CG9630 Uniprot:Q9VHU1
Length = 613
Score = 246 (91.7 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 83/283 (29%), Positives = 143/283 (50%)
Query: 175 WNELRLHPL---LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
W+ L PL +++ + GF++ TP+Q A IP + D+ A TGSGKTLAF +
Sbjct: 6 WSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLL--ARKDVSAEAVTGSGKTLAFLV 63
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P+++ +L+ R K + PK + AL+I+PTRELA Q+++ L + + +
Sbjct: 64 PMLE-ILQRRHKE-----------TPWGPK-EIGALVISPTRELARQISEVLAQFLEHED 110
Query: 292 VRVVP---IVGGMSTEKQERLLKAR-PELVVGTPGRLWELMS--GGEKHLV-ELHTLSFF 344
+ + IVGG S E+ L+ P ++V TPGRL +L G + +L ++ +L F
Sbjct: 111 LEHLNQQLIVGGNSIEEDIATLRRETPCILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFL 170
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
VLDEADR+++ G + +I+ LP + G TQT ++ R ++ S
Sbjct: 171 VLDEADRLLDLGFKTSVNNILGYLPRQRRT--GLFSATQTTEVTDLIRAGLRNPVLVSVK 228
Query: 405 IALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAI 447
S + +L++ ++ + + +E LS A + V +
Sbjct: 229 EKASVNTPARLQNFYRIVEPELKFVALLEFLSSPATVIGKVMV 271
>UNIPROTKB|E2R316 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 Ensembl:ENSCAFT00000035837 Uniprot:E2R316
Length = 483
Score = 243 (90.6 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 76/227 (33%), Positives = 114/227 (50%)
Query: 174 AWNEL--RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+W L +LHP ++ ++ +LGF TP+Q A IP + K D+ A TGSGKTLAF +
Sbjct: 8 SWESLPTQLHPQVLGALGQLGFPHMTPVQSATIPLFM-KNK-DVAAEAVTGSGKTLAFVI 65
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI- 290
PI++ LL EK K + A+IITPTRELA+QV + L K
Sbjct: 66 PILEILLRREEKL---------------KKNQVGAIIITPTRELAIQVDEVLAHFTKSFP 110
Query: 291 NVRVVPIVGGMS-TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE---LHTLSFFVL 346
+ +GG + + R + ++V TPGRL ++ + L + +L VL
Sbjct: 111 QFSQILWIGGRNPADDVSRFKEQGGNIIVATPGRLEDMFRRKVEGLDLASCVKSLEVLVL 170
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 393
DEADR+++ G + +I++ LP + + QTQ V SL R
Sbjct: 171 DEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQE---VESLVR 214
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 178 (67.7 bits), Expect = 4.9e-18, Sum P(3) = 4.9e-18
Identities = 50/155 (32%), Positives = 81/155 (52%)
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
+ +G A+TGSGKTL + LP + + ++ ++G+ G + AL++ PTR
Sbjct: 320 NFVGIAKTGSGKTLGYILPAIVHINNQQPL------QRGD--------GPI-ALVLAPTR 364
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELA Q+ E VR + GG Q R L+ E+V+ TPGRL + +S G
Sbjct: 365 ELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGST 424
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
+L ++ VLDEADRM++ G +++ I+ +
Sbjct: 425 NLKRC---TYLVLDEADRMLDMGFEPQIRKIVSQI 456
Score = 118 (46.6 bits), Expect = 4.9e-18, Sum P(3) = 4.9e-18
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGA 218
E+E+ ++ ++E+ L +MK I R G+K PT IQ P A G + +G
Sbjct: 267 EQEITVRGQVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAM-SGS-NFVGI 324
Query: 219 AETGSGKTLAFGLP 232
A+TGSGKTL + LP
Sbjct: 325 AKTGSGKTLGYILP 338
Score = 40 (19.1 bits), Expect = 4.9e-18, Sum P(3) = 4.9e-18
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 388 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAI 447
VS + R RQTL++SAT K+L L +N + S+E LS +R V +
Sbjct: 453 VSQI-RPDRQTLMWSATWPKEV---KQLAEDFLGNYIQIN-IGSLE-LSANHNIRQVVDV 506
Query: 448 VD 449
D
Sbjct: 507 CD 508
>UNIPROTKB|F5H5U2 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AC055713 EMBL:AC117503
HGNC:HGNC:20085 ChiTaRS:DDX55 IPI:IPI01010332
ProteinModelPortal:F5H5U2 SMR:F5H5U2 Ensembl:ENST00000538744
ArrayExpress:F5H5U2 Bgee:F5H5U2 Uniprot:F5H5U2
Length = 569
Score = 244 (91.0 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 73/217 (33%), Positives = 109/217 (50%)
Query: 174 AWNELR--LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+W L LHP ++ ++ LGF TP+Q A IP + K D+ A TGSGKTLAF +
Sbjct: 8 SWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFM-RNK-DVAAEAVTGSGKTLAFVI 65
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI- 290
PI++ LL EK K + A+IITPTRELA+Q+ + L K
Sbjct: 66 PILEILLRREEKL---------------KKSQVGAIIITPTRELAIQIDEVLSHFTKHFP 110
Query: 291 NVRVVPIVGGMST-EKQERLLKARPELVVGTPGRLWELMSGGEKHLVE---LHTLSFFVL 346
+ +GG + E ER + ++V TPGRL ++ + L + +L VL
Sbjct: 111 EFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVL 170
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
DEADR+++ G + +I++ LP + + QTQ
Sbjct: 171 DEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQ 207
>UNIPROTKB|Q8EJQ5 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 241 (89.9 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 63/193 (32%), Positives = 105/193 (54%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
+L LHP + +++ GF+ TPIQ +P Q K DI G A+TG+GKT+AF +
Sbjct: 13 DLPLHPEVKQALAENGFEFCTPIQALSLPVLL-QSK-DIAGQAQTGTGKTMAFLVATFNH 70
Query: 237 LLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
LL G+ L + P RA+I+ PTRELA+Q+ +AK ++V
Sbjct: 71 LLSSSIPEGRQLNQ---------P----RAIIMAPTRELAIQIAKDAILLAKHTRLKVGI 117
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+ GG S + Q ++L ++++GT GR+ + + G ++ L+ + VLDEADRM + G
Sbjct: 118 VYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQG---IINLNAIQAVVLDEADRMFDLG 174
Query: 357 HFRELQSIIDMLP 369
++++ + +P
Sbjct: 175 FIKDIRFLFRRMP 187
>TIGR_CMR|SO_0407 [details] [associations]
symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 241 (89.9 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 63/193 (32%), Positives = 105/193 (54%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
+L LHP + +++ GF+ TPIQ +P Q K DI G A+TG+GKT+AF +
Sbjct: 13 DLPLHPEVKQALAENGFEFCTPIQALSLPVLL-QSK-DIAGQAQTGTGKTMAFLVATFNH 70
Query: 237 LLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
LL G+ L + P RA+I+ PTRELA+Q+ +AK ++V
Sbjct: 71 LLSSSIPEGRQLNQ---------P----RAIIMAPTRELAIQIAKDAILLAKHTRLKVGI 117
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+ GG S + Q ++L ++++GT GR+ + + G ++ L+ + VLDEADRM + G
Sbjct: 118 VYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQG---IINLNAIQAVVLDEADRMFDLG 174
Query: 357 HFRELQSIIDMLP 369
++++ + +P
Sbjct: 175 FIKDIRFLFRRMP 187
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 241 (89.9 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 64/192 (33%), Positives = 102/192 (53%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
A+ E L K+I + G+ + TP+QK IP Q D++ A+TGSGKT AF LPI
Sbjct: 168 AFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVI--QAGRDLMSCAQTGSGKTAAFLLPI 225
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ R++++ A +K +E + +I+ PTREL Q+ ++ G +R
Sbjct: 226 VDRMMKDGVTASAF--QKQQEPQ---------CIIVAPTRELINQIFLEARKFVYGTCIR 274
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V I GG T R + ++ TPGRL +++ G+ LVE+ + VLDEADRM+
Sbjct: 275 PVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEV---KYLVLDEADRML 331
Query: 354 ENGHFRELQSII 365
+ G +++ +I
Sbjct: 332 DMGFGLDMKKLI 343
Score = 42 (19.8 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 393 RKKRQTLVFSAT 404
+ +RQTL+FSAT
Sbjct: 351 KDRRQTLMFSAT 362
>UNIPROTKB|Q8NHQ9 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
OMA:CACVEYW EMBL:AC055713 EMBL:AC117503 EMBL:BC030020 EMBL:AL833756
EMBL:AB046815 IPI:IPI00185361 RefSeq:NP_065987.1 UniGene:Hs.286173
ProteinModelPortal:Q8NHQ9 SMR:Q8NHQ9 STRING:Q8NHQ9
PhosphoSite:Q8NHQ9 DMDM:296439376 PaxDb:Q8NHQ9 PRIDE:Q8NHQ9
Ensembl:ENST00000238146 GeneID:57696 KEGG:hsa:57696 UCSC:uc001ufi.3
GeneCards:GC12P124086 HGNC:HGNC:20085 neXtProt:NX_Q8NHQ9
PharmGKB:PA134984021 InParanoid:Q8NHQ9 ChiTaRS:DDX55
GenomeRNAi:57696 NextBio:64547 ArrayExpress:Q8NHQ9 Bgee:Q8NHQ9
CleanEx:HS_DDX55 Genevestigator:Q8NHQ9 GermOnline:ENSG00000111364
Uniprot:Q8NHQ9
Length = 600
Score = 244 (91.0 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 73/217 (33%), Positives = 109/217 (50%)
Query: 174 AWNELR--LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+W L LHP ++ ++ LGF TP+Q A IP + K D+ A TGSGKTLAF +
Sbjct: 8 SWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFM-RNK-DVAAEAVTGSGKTLAFVI 65
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI- 290
PI++ LL EK K + A+IITPTRELA+Q+ + L K
Sbjct: 66 PILEILLRREEKL---------------KKSQVGAIIITPTRELAIQIDEVLSHFTKHFP 110
Query: 291 NVRVVPIVGGMST-EKQERLLKARPELVVGTPGRLWELMSGGEKHLVE---LHTLSFFVL 346
+ +GG + E ER + ++V TPGRL ++ + L + +L VL
Sbjct: 111 EFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVL 170
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
DEADR+++ G + +I++ LP + + QTQ
Sbjct: 171 DEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQ 207
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 170 (64.9 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 36/99 (36%), Positives = 60/99 (60%)
Query: 267 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 326
LI+ PTREL LQV D +K K + ++ V + GG+ Q LK +++V TPGRL +
Sbjct: 431 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLD 490
Query: 327 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 365
+ G +L++ + V+DEADR+++ G ++L+ I+
Sbjct: 491 FLENGNINLLKC---IYVVIDEADRLLDMGFEKQLRKIM 526
Score = 126 (49.4 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 29/50 (58%), Positives = 33/50 (66%)
Query: 193 FKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEERE 242
F EPT IQK P A GK D+IG AETGSGKTLAF LP +L+ +E
Sbjct: 307 FSEPTAIQKITWPIAL-SGK-DLIGVAETGSGKTLAFVLPCFMHILKHKE 354
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 241 (89.9 bits), Expect = 7.2e-18, Sum P(2) = 7.2e-18
Identities = 64/192 (33%), Positives = 102/192 (53%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
A+ E L K+I + G+ + TP+QK IP Q D++ A+TGSGKT AF LPI
Sbjct: 168 AFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVI--QAGRDLMSCAQTGSGKTAAFLLPI 225
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ R++++ A +K +E + +I+ PTREL Q+ ++ G +R
Sbjct: 226 VDRMMKDGVTASAF--QKQQEPQ---------CIIVAPTRELINQIFLEARKFVYGTCIR 274
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V I GG T R + ++ TPGRL +++ G+ LVE+ + VLDEADRM+
Sbjct: 275 PVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEV---KYLVLDEADRML 331
Query: 354 ENGHFRELQSII 365
+ G +++ +I
Sbjct: 332 DMGFGLDMKKLI 343
Score = 42 (19.8 bits), Expect = 7.2e-18, Sum P(2) = 7.2e-18
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 393 RKKRQTLVFSAT 404
+ +RQTL+FSAT
Sbjct: 351 KDRRQTLMFSAT 362
>UNIPROTKB|I3LKU6 [details] [associations]
symbol:LOC100620190 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00550000074847 EMBL:CU468306
Ensembl:ENSSSCT00000028542 OMA:FANTIDC Uniprot:I3LKU6
Length = 373
Score = 237 (88.5 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 58/172 (33%), Positives = 89/172 (51%)
Query: 273 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 332
++ A+++ + + V + ++ +VGGMST+KQ+R+L +PE+V+ TPGRLWEL+ +
Sbjct: 1 KKQAVRLNNSVPYVLCTLGIKTAILVGGMSTQKQQRMLNRQPEIVIATPGRLWELVKEKQ 60
Query: 333 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT----QTCVTV 388
HL L L V+DEADRM+E GHF EL +++ML N S QT T V
Sbjct: 61 PHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML---NDSQYNPKRQTLVFSATLTLV 117
Query: 389 SSLQRK---KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSE 437
+ K+ T L +K G K+ ++ETL+E
Sbjct: 118 HQAPARILHKKHAKKIDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTE 169
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 236 (88.1 bits), Expect = 7.4e-18, Sum P(2) = 7.4e-18
Identities = 70/209 (33%), Positives = 110/209 (52%)
Query: 162 LVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAET 221
LV I ++ E++ +++ + + G ++PTPIQ IP G+ D+IG A T
Sbjct: 166 LVEGEGIPPPIKSFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTIL-SGR-DMIGIAFT 223
Query: 222 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 281
GSGKTL F LP++ LE+ EK + +G P G LII P+RELA Q
Sbjct: 224 GSGKTLVFTLPVIMFCLEQ-EKRLPFSKREG-------PYG----LIICPSRELARQTHG 271
Query: 282 HLKEVAKGINVRVVP------IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
++ + + +P +GGMS ++Q +K ++V TPGRL +L+ +K +
Sbjct: 272 IIEYYCRLLQEDSLPPLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLL---QKKM 328
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSI 364
V L + LDEADRMI+ G ++++I
Sbjct: 329 VSLDICRYLALDEADRMIDMGFEGDIRTI 357
Score = 49 (22.3 bits), Expect = 7.4e-18, Sum P(2) = 7.4e-18
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 387 TVSSLQRKKRQTLVFSATIALSA-DFRKKLKHGSLKLKQSVNGLNSIETLSE 437
T+ S + +RQTL+FSAT+ +F K + + G S++ + E
Sbjct: 356 TIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVVQE 407
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 177 (67.4 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 36/105 (34%), Positives = 62/105 (59%)
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
+AL++ PTRELA Q+ ++ + + V+ VGG S + +R+L++ +VVGTPGR+
Sbjct: 111 QALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRV 170
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
++L+ + + + FVLDEAD M+ G ++ I +LP
Sbjct: 171 FDLL---RRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLP 212
Score = 109 (43.4 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 156 DDAEEELVSEA-EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQ-KACIPAAAHQGKV 213
++ EE + E+ FDA + L P L++ IY GF++P+ IQ + IP +G +
Sbjct: 26 EEGEETFYTNYDEVCDSFDA---MELQPDLLRGIYAYGFEKPSAIQQRGIIPFC--KG-L 79
Query: 214 DIIGAAETGSGKTLAFGLPIMQRL 237
D+I A++G+GKT F ++Q+L
Sbjct: 80 DVIQQAQSGTGKTATFCSGVLQQL 103
>UNIPROTKB|F1P8J6 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969
EMBL:AAEX03014637 RefSeq:XP_543371.2 Ensembl:ENSCAFT00000011945
GeneID:486246 KEGG:cfa:486246 Uniprot:F1P8J6
Length = 599
Score = 243 (90.6 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 76/227 (33%), Positives = 114/227 (50%)
Query: 174 AWNEL--RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+W L +LHP ++ ++ +LGF TP+Q A IP + K D+ A TGSGKTLAF +
Sbjct: 8 SWESLPTQLHPQVLGALGQLGFPHMTPVQSATIPLFM-KNK-DVAAEAVTGSGKTLAFVI 65
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI- 290
PI++ LL EK K + A+IITPTRELA+QV + L K
Sbjct: 66 PILEILLRREEKL---------------KKNQVGAIIITPTRELAIQVDEVLAHFTKSFP 110
Query: 291 NVRVVPIVGGMS-TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE---LHTLSFFVL 346
+ +GG + + R + ++V TPGRL ++ + L + +L VL
Sbjct: 111 QFSQILWIGGRNPADDVSRFKEQGGNIIVATPGRLEDMFRRKVEGLDLASCVKSLEVLVL 170
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 393
DEADR+++ G + +I++ LP + + QTQ V SL R
Sbjct: 171 DEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQE---VESLVR 214
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 179 (68.1 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 36/104 (34%), Positives = 66/104 (63%)
Query: 267 LIITPTRELALQVTDHLKEVAKGIN-VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
L++TPTRELA+Q+ KE+ G+ +R +VGG+ Q L+ R ++++ TPGRL
Sbjct: 276 LVLTPTRELAIQIERQAKELMSGLPCLRTALLVGGLPAPPQRHRLRQRIQVIIATPGRLL 335
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+++ ++ VEL ++ V+DEAD M++ G +++ +++ LP
Sbjct: 336 DII---KQRSVELGSIKIVVVDEADTMLKMGFQQQVLDVLEQLP 376
Score = 113 (44.8 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEE-RE 242
L +++ G++ PTPIQ IP G+ D++ +A+TGSGKT AF LP++ R L + +
Sbjct: 215 LNRNLKASGYEVPTPIQMQMIPVGL-LGR-DVLASADTGSGKTAAFLLPVILRALSQSKS 272
Query: 243 KAGKMLEEKGEEA 255
+G +L E A
Sbjct: 273 PSGLVLTPTRELA 285
WARNING: HSPs involving 597 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.130 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 466 407 0.00078 118 3 11 23 0.46 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 847
No. of states in DFA: 611 (65 KB)
Total size of DFA: 223 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.63u 0.13s 36.76t Elapsed: 00:00:01
Total cpu time: 36.66u 0.13s 36.79t Elapsed: 00:00:01
Start: Fri May 10 05:03:45 2013 End: Fri May 10 05:03:46 2013
WARNINGS ISSUED: 2