BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012319
(466 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255554328|ref|XP_002518204.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223542800|gb|EEF44337.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 496
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 321/448 (71%), Positives = 361/448 (80%), Gaps = 17/448 (3%)
Query: 20 RRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIP 79
+RKR + E E+ +SL WNSS S ++DPF+ VGS+EL+GGFLSLEEIDE Y +IP
Sbjct: 21 KRKRNNEDPELERFDSLSWNSSLS--EDDPFSGFVGSHELEGGFLSLEEIDEVDYGFEIP 78
Query: 80 KPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKG 139
KPEKGK GKK +KK+K + D DG +++ +N K +K +KKKKKK
Sbjct: 79 KPEKGKTGKKLKSKKQKHN--------DADGSVKEKEKEEKTLENEKKKKKRKKKKKKAK 130
Query: 140 KKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPI 199
+ K E+ VSNG DD + E V EAE F AWNELRLHPLLMKSIYRLGFKEPTPI
Sbjct: 131 ETQKN-EQPAAVSNGEDDTDGESVDEAE----FHAWNELRLHPLLMKSIYRLGFKEPTPI 185
Query: 200 QKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYA 259
QKACIP AAHQGK D+IGAAETGSGKTLAFGLPI+QRLLEER+KA L+E GEEAEKY
Sbjct: 186 QKACIPPAAHQGK-DVIGAAETGSGKTLAFGLPILQRLLEERDKAANYLDEMGEEAEKYG 244
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
P G LRALIITPTRELALQVTDHLKE A GIN++VVPIVGGMSTEKQERLLKARPE++VG
Sbjct: 245 PTGLLRALIITPTRELALQVTDHLKEAAMGINIKVVPIVGGMSTEKQERLLKARPEIIVG 304
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQS 379
TPGRLWELMSGGE HLVELH+LSFFVLDEADRMIENGHFRELQSIIDMLPM +GS EG S
Sbjct: 305 TPGRLWELMSGGESHLVELHSLSFFVLDEADRMIENGHFRELQSIIDMLPMASGSVEGLS 364
Query: 380 EQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQ-SVNGLNSIETLSER 438
+ TQ CVT+S+LQRKKRQT VFSATIALS DFRKKLK GSLK KQ + +GLNSIE LSER
Sbjct: 365 QNTQNCVTLSNLQRKKRQTFVFSATIALSTDFRKKLKRGSLKPKQLTADGLNSIENLSER 424
Query: 439 AGMRANVAIVDLTNVSVLANKLEESFIE 466
AGMR N AI+DLTN S+LA+KLEESFIE
Sbjct: 425 AGMRPNAAIIDLTNASILAHKLEESFIE 452
>gi|224107545|ref|XP_002314517.1| predicted protein [Populus trichocarpa]
gi|222863557|gb|EEF00688.1| predicted protein [Populus trichocarpa]
Length = 847
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/458 (67%), Positives = 358/458 (78%), Gaps = 29/458 (6%)
Query: 17 KPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNL 76
K +RKRT E ++L+SL WNSS S +DPF+ + GS+EL+GGFLSLEEIDE Y L
Sbjct: 19 KKGKRKRTHIDPEIDRLDSLPWNSSIS--QDDPFSVIAGSHELEGGFLSLEEIDEGDYGL 76
Query: 77 QIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGN-------GVQKEQEKNLKNQK 129
+IP +K ++ N K+++ D D D DG G+ E +K K +K
Sbjct: 77 EIPGLDKKVKKERKNKSKKQK---------DSDADADGVEEEVEEEGINVEDKKKRKKRK 127
Query: 130 GKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIY 189
KKK K+ V+E+ +VSN DD E E V E TEF WNELRLHPLLMKSIY
Sbjct: 128 KKKKAKESS-----RVDETTSVSNNKDDVEGESVDE----TEFYGWNELRLHPLLMKSIY 178
Query: 190 RLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLE 249
RLGFKEPTPIQKACIPAAAHQGK D++GAAETGSGKTLAFGLPI+QRLLEE++KA M +
Sbjct: 179 RLGFKEPTPIQKACIPAAAHQGK-DVVGAAETGSGKTLAFGLPILQRLLEEQDKASNMGD 237
Query: 250 EKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERL 309
GEEAE++APKG LRALIITPTRELA+QVTDH KE A GIN+RVV IVGGMSTEKQERL
Sbjct: 238 NVGEEAERFAPKGLLRALIITPTRELAIQVTDHFKEAAHGINIRVVSIVGGMSTEKQERL 297
Query: 310 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
LKARPE++VGTPGRLWELMSGGEKHLVELH+LSFFVLDEADRMIENGHFRELQSIIDMLP
Sbjct: 298 LKARPEIIVGTPGRLWELMSGGEKHLVELHSLSFFVLDEADRMIENGHFRELQSIIDMLP 357
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSV-NG 428
M +GS GQS+ ++ C T+S++Q KKRQT VFSATIALSADFRKKLK GSLK KQS+ +G
Sbjct: 358 MASGSIGGQSQSSENCQTLSNMQIKKRQTFVFSATIALSADFRKKLKRGSLKSKQSMADG 417
Query: 429 LNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
LNSIE LSERAGMRAN AI+DLTN S+LANKLEESFIE
Sbjct: 418 LNSIEMLSERAGMRANAAIIDLTNASILANKLEESFIE 455
>gi|356520440|ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Glycine
max]
Length = 810
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 308/465 (66%), Positives = 364/465 (78%), Gaps = 15/465 (3%)
Query: 12 HSKETKPNRRKRTRKSR-EAEKLNSLKWNSSF-SAADNDPFAFLVGSNELDGGFLSLEEI 69
+S + KP R++ + KS E ++L+SL WNS+ D+D F+ +GSNEL+GGFLSLEEI
Sbjct: 9 NSSQRKPKRKRASAKSDPELDRLDSLPWNSALPQNDDDDAFSLFIGSNELEGGFLSLEEI 68
Query: 70 DEASYNLQIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQK 129
DEA Y L IP+PE K K ++ + ++ G D V+ E +++LK+++
Sbjct: 69 DEAEYGLSIPEPEVDKRKTKKKKSEQNENVKKQQQDGVDSACSDDTVVEAELDESLKSKE 128
Query: 130 GKKKKKKKK-----GKKIKTVEESVT--VSNGPDDAEEELVSEAEISTEFDAWNELRLHP 182
KKKKKK K ++ +TVE S +N DD EE V E TEF AWNELRLHP
Sbjct: 129 KKKKKKKTKNKKKDAREDQTVEPSDAGLDTNVKDDIGEEDVDE----TEFYAWNELRLHP 184
Query: 183 LLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEERE 242
LL+K+I +LGFKEPTPIQKACIPAAAHQGK D++GAAETGSGKTLAFGLPI+QRLLEERE
Sbjct: 185 LLLKAICKLGFKEPTPIQKACIPAAAHQGK-DVVGAAETGSGKTLAFGLPILQRLLEERE 243
Query: 243 KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMS 302
KAG M+ E+GEE EKYA G LRALII PTRELALQVTDHLK VAK INVRV PIVGG+
Sbjct: 244 KAGNMVGERGEEPEKYASTGLLRALIIAPTRELALQVTDHLKAVAKHINVRVTPIVGGIL 303
Query: 303 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 362
EKQERLLKA+PE+VVGTPGRLWELMS GEKHLVELH+LSFFVLDEADRM++NGHF+ELQ
Sbjct: 304 AEKQERLLKAKPEIVVGTPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVQNGHFKELQ 363
Query: 363 SIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKL 422
SIIDMLPM+N S E S+ Q+CVTVSS QRKKRQTLVFSAT+ALS+DFRKKLK GS+K
Sbjct: 364 SIIDMLPMSNNSAEDNSQHVQSCVTVSSYQRKKRQTLVFSATVALSSDFRKKLKRGSIKQ 423
Query: 423 KQSV-NGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
KQS+ +GLNSIETLSERAGMR+N AI+DLTN S+LA KLEESFIE
Sbjct: 424 KQSLTDGLNSIETLSERAGMRSNAAIIDLTNPSILATKLEESFIE 468
>gi|225433316|ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Vitis vinifera]
gi|296083755|emb|CBI23744.3| unnamed protein product [Vitis vinifera]
Length = 788
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 318/454 (70%), Positives = 358/454 (78%), Gaps = 18/454 (3%)
Query: 18 PN-RRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNL 76
PN RRKRT + + E+L SL WN S D DPF+ VGS+EL+GGFLSLEEIDE+ Y L
Sbjct: 6 PNARRKRTAVNPDLERLESLPWNPSLPDVD-DPFSLFVGSDELEGGFLSLEEIDESEYGL 64
Query: 77 QIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKK 136
+I +P G KK N K+ K+S + GD D G GV+ E+ + ++K KKKKK
Sbjct: 65 EIHEP--GPEDKKGNPKQSKKSKKRKS---SGDNDSSGGGVEDGTEEEVVDKKNFKKKKK 119
Query: 137 KKGKKI---KTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGF 193
KK K +T EES TVSN DD E + V EA EF WNELRLHPLLMKSI+RLGF
Sbjct: 120 KKKKVTKKNQTNEESATVSNDKDDVEGDSVDEA----EFYEWNELRLHPLLMKSIHRLGF 175
Query: 194 KEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGE 253
K+PTPIQKACIPAAAHQGK D++GA+ETGSGKTLA GLPI+QRLLEEREKA + L E E
Sbjct: 176 KQPTPIQKACIPAAAHQGK-DVVGASETGSGKTLALGLPILQRLLEEREKAAEPLAENSE 234
Query: 254 EAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKAR 313
EKYA G LRALIITPTRELALQVTDHLKEVAKG NVRVVPIVGGMSTEKQERLLKAR
Sbjct: 235 --EKYAEGGILRALIITPTRELALQVTDHLKEVAKGTNVRVVPIVGGMSTEKQERLLKAR 292
Query: 314 PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 373
PE+VVGTPGRLWELMS GE HLVELH+LSFFVLDEADRM+ENGHF ELQSIID+LP T+G
Sbjct: 293 PEIVVGTPGRLWELMSRGEDHLVELHSLSFFVLDEADRMVENGHFHELQSIIDILPKTSG 352
Query: 374 SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVN-GLNSI 432
S E S+ T+ C TVS++QRKKRQT VFSATIALSADFRKKLK G+L+ KQ +N GLNSI
Sbjct: 353 SMESLSQNTENCFTVSNIQRKKRQTFVFSATIALSADFRKKLKRGALRSKQLMNDGLNSI 412
Query: 433 ETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
ETLSERAGMR N AIVDLTN S++ANKLEESFIE
Sbjct: 413 ETLSERAGMRPNAAIVDLTNASIMANKLEESFIE 446
>gi|449509127|ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like, partial
[Cucumis sativus]
Length = 784
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 291/492 (59%), Positives = 357/492 (72%), Gaps = 43/492 (8%)
Query: 9 TYEHSKETKPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEE 68
T S + + +RK+T+K E E+L+SL WNSS +D + +GSN+L+GGFLSLEE
Sbjct: 6 TQSTSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPI--DDTLSAFIGSNDLEGGFLSLEE 63
Query: 69 IDEASYNLQIPKPEKGK----PGKKTNTKKRKRSSAN----------------------- 101
IDEA Y + IP+P+ K P N++K ++++A+
Sbjct: 64 IDEAEYGMVIPEPDTRKHKLIPKASGNSRKEEQNNADYCEDASRAKREKEKKKKKKKKVI 123
Query: 102 ------EEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGP 155
E+D G D +G++ E + + + +KK++ K+ +T + +
Sbjct: 124 HEVPTAEKDVAIDIGGNDNDGIETEIGDEMDDDDHLETEKKQQKKEKETKDHGID-KEIR 182
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
D+ E++ V E TE+ AWNELRLHPLLMKSIY+LGFKEPT IQKACIPAAA+QGK D+
Sbjct: 183 DEVEKDAVDE----TEYYAWNELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQGK-DV 237
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 275
+GAAETGSGKTLAFGLPI+QR L+EREK+GKM EEKG +A+KYAPK LRALIITPTREL
Sbjct: 238 VGAAETGSGKTLAFGLPILQRFLDEREKSGKMSEEKGVDAKKYAPKSLLRALIITPTREL 297
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
ALQVTDHLK VA GI++RVVPIVGGMSTEKQERLL+ RPE+VVGTPGRLWELMSGGEKHL
Sbjct: 298 ALQVTDHLKAVAVGIDIRVVPIVGGMSTEKQERLLRTRPEVVVGTPGRLWELMSGGEKHL 357
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
VEL LSFFVLDEADRMIENGHFRELQSIIDMLP+TNGS E + + +T QRKK
Sbjct: 358 VELEALSFFVLDEADRMIENGHFRELQSIIDMLPVTNGSAENL-QNAENSLTTPISQRKK 416
Query: 396 RQTLVFSATIALSADFRKKLKHGSLKLKQS-VNGLNSIETLSERAGMRANVAIVDLTNVS 454
RQTLVFSAT++LS+DFRKKLK S K QS ++GLNSIE LSERAG+R NVA+++LTN S
Sbjct: 417 RQTLVFSATLSLSSDFRKKLKRVSSKPNQSGMDGLNSIEALSERAGIRPNVAVINLTNTS 476
Query: 455 VLANKLEESFIE 466
VLAN LEESFIE
Sbjct: 477 VLANNLEESFIE 488
>gi|357505253|ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355497930|gb|AES79133.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 798
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 297/467 (63%), Positives = 344/467 (73%), Gaps = 35/467 (7%)
Query: 17 KPNRRKRTRKSREAE--KLNSLKWNSSFSAA----DNDP-FAFLVGSNELDGGFLSLEEI 69
K R+ RT K +AE + +SL WNSS DND F+ GSNEL+GGFLSLEEI
Sbjct: 8 KSKRKNRTVKPHDAELDRFDSLPWNSSIPQPDENDDNDASFSLFTGSNELEGGFLSLEEI 67
Query: 70 DEASYNLQIPKPE------KGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEK 123
DEA Y L IP PE KP KK+N +K+ DG G ++
Sbjct: 68 DEAEYGLNIPDPENHDRKHNSKPDKKSNKQKQ-------------DGACSGGETMNDESI 114
Query: 124 NLKNQKGKKKKKKKKGKKIKTVEESVTVSNGP--DDAEEELVSEAEISTEFDAWNELRLH 181
+ +K KKKKK K K+ + VE S T N D +EE + E TE+ AWNELRLH
Sbjct: 115 KSEVKKKKKKKKNKDAKENQKVELSNTGVNADVKDSVDEENIDE----TEYYAWNELRLH 170
Query: 182 PLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEER 241
P LMK+I++LGFKEPTPIQKAC+PAAAHQGK D+IGAAETGSGKTLAFGLPI+QRLLEER
Sbjct: 171 PRLMKAIHKLGFKEPTPIQKACVPAAAHQGK-DVIGAAETGSGKTLAFGLPILQRLLEER 229
Query: 242 EKAGKMLEEKGEE-AEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGG 300
EKA + GEE AEKYA G LR+LII PTRELALQV HLK VAK INVRV IVGG
Sbjct: 230 EKAESISGVNGEEAAEKYATTGLLRSLIIAPTRELALQVAKHLKAVAKHINVRVTAIVGG 289
Query: 301 MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 360
+ EKQERLLKARPE+VV TPGRLWELMS GEKHL+ELH+LSFFVLDEADRM+++GHF+E
Sbjct: 290 ILPEKQERLLKARPEIVVATPGRLWELMSSGEKHLIELHSLSFFVLDEADRMVQSGHFKE 349
Query: 361 LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSL 420
LQSIIDMLPM+N S+E S+ Q CVTVSS+Q+KKRQTLVFSAT+ALSADFRKKLK GS+
Sbjct: 350 LQSIIDMLPMSNISSEDNSKDAQNCVTVSSIQKKKRQTLVFSATVALSADFRKKLKRGSI 409
Query: 421 KLKQ-SVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ KQ S +GL+SIETLSERAGMR N AI+DLTN S+LA K+EESFIE
Sbjct: 410 QKKQLSTDGLDSIETLSERAGMRPNAAIIDLTNPSILAAKIEESFIE 456
>gi|449458872|ref|XP_004147170.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Cucumis
sativus]
Length = 848
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 299/511 (58%), Positives = 359/511 (70%), Gaps = 61/511 (11%)
Query: 9 TYEHSKETKPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEE 68
T S + + +RK+T+K E E+L+SL WNSS +D + +GSN+L+GGFLSLEE
Sbjct: 6 TQSTSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPI--DDTLSAFIGSNDLEGGFLSLEE 63
Query: 69 IDEASYNLQIPKPEKGK----PGKKTNTKKRKRSSANE-EDPGDGDGDEDGNGVQKEQEK 123
IDEA Y + IP+P+ K P NT+K ++++A+ ED G D + KE
Sbjct: 64 IDEAEYGMVIPEPDTRKHKLIPKASGNTRKEEQNNADYCEDASRGSND----SIDKEAAG 119
Query: 124 NLKNQKGKKKKKKKKGK--------KIKTVEESVTVSNGPDDAE---------------- 159
+ N K KK KK+K K ++ T E+ V + G +D +
Sbjct: 120 HNVNTKTSKKGKKEKKKKKKKKVIHEVPTAEKDVAIDIGGNDNDGIETEIGDEMDDDDHL 179
Query: 160 -----------------------EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEP 196
+E+ +A TE+ AWNELRLHPLLMKSIY+LGFKEP
Sbjct: 180 ETEKKQQKKEKETKDHGIDKEIRDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKEP 239
Query: 197 TPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAE 256
T IQKACIPAAA+QGK D++GAAETGSGKTLAFGLPI+QR L+EREK+GKM EEKG +A+
Sbjct: 240 TAIQKACIPAAAYQGK-DVVGAAETGSGKTLAFGLPILQRFLDEREKSGKMSEEKGVDAK 298
Query: 257 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 316
KYAPK LRALIITPTRELALQVTDHLK VA GI++RVVPIVGGMSTEKQERLL+ RPE+
Sbjct: 299 KYAPKSLLRALIITPTRELALQVTDHLKAVAVGIDIRVVPIVGGMSTEKQERLLRTRPEV 358
Query: 317 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 376
VVGTPGRLWELMSGGEKHLVEL LSFFVLDEADRMIENGHFRELQSIIDMLP+TNGS E
Sbjct: 359 VVGTPGRLWELMSGGEKHLVELEALSFFVLDEADRMIENGHFRELQSIIDMLPVTNGSAE 418
Query: 377 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQS-VNGLNSIETL 435
+ + +T QRKKRQTLVFSAT++LS+DFRKKLK S K QS ++GLNSIE L
Sbjct: 419 NL-QNAENSLTTPISQRKKRQTLVFSATLSLSSDFRKKLKRVSSKPNQSGMDGLNSIEAL 477
Query: 436 SERAGMRANVAIVDLTNVSVLANKLEESFIE 466
SERAG+R NVA+++LTN SVLAN LEESFIE
Sbjct: 478 SERAGIRPNVAVINLTNTSVLANNLEESFIE 508
>gi|297834580|ref|XP_002885172.1| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis lyrata subsp.
lyrata]
gi|297331012|gb|EFH61431.1| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis lyrata subsp.
lyrata]
Length = 831
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/321 (71%), Positives = 264/321 (82%), Gaps = 2/321 (0%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
+ S VS D EE V EI EF AW +RLHPLLMKSIY LGFK+PT IQKAC
Sbjct: 161 DTSDAVSCDDDYKVEEQVEGEEIPPEFSAWGLMRLHPLLMKSIYHLGFKQPTEIQKACFS 220
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLR 265
AA+QGK D+IGAAETGSGKTLAFGLPI+QRLL+EREK GK+ KGE+A+KYA G+LR
Sbjct: 221 IAAYQGK-DVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEKAQKYAADGYLR 279
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
ALIITPTRELALQVTDHLK A+ +NV+VVPIVGGMS+ KQERLLK +PE+VVGTPGRLW
Sbjct: 280 ALIITPTRELALQVTDHLKNAAENLNVKVVPIVGGMSSAKQERLLKGKPEIVVGTPGRLW 339
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTC 385
ELMS GEKHLVELH+LSFFVLDEADRM+E+GHFRELQSIID+LP+T+ NEG+ + Q+
Sbjct: 340 ELMSAGEKHLVELHSLSFFVLDEADRMVESGHFRELQSIIDLLPVTDRPNEGKMQTVQSS 399
Query: 386 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIETLSERAGMRAN 444
TVS+ +KKRQT VFSATIALS+DFRKKLK GS K K S +G +NSIE LSERAGMR +
Sbjct: 400 DTVSNAPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKPSSSGEVNSIEVLSERAGMRDS 459
Query: 445 VAIVDLTNVSVLANKLEESFI 465
VAI+DLT S+LA K+EESFI
Sbjct: 460 VAIIDLTTASILAPKIEESFI 480
>gi|227202696|dbj|BAH56821.1| AT3G16840 [Arabidopsis thaliana]
Length = 827
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/324 (70%), Positives = 267/324 (82%), Gaps = 2/324 (0%)
Query: 143 KTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
K + S VS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKA
Sbjct: 161 KNQDASAAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKA 220
Query: 203 CIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG 262
C AA+QGK D+IGAAETGSGKTLAFGLPI+QRLL+EREK GK+ KGEEA+KYA G
Sbjct: 221 CFNVAAYQGK-DVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADG 279
Query: 263 HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPG 322
+LRALIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPG
Sbjct: 280 YLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPG 339
Query: 323 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT 382
RLWELMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ NEG+++
Sbjct: 340 RLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDRPNEGKTQTV 399
Query: 383 QTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIETLSERAGM 441
++ TV ++ +KKRQT VFSATIALS+DFRKKLK GS K KQS +G +NSIE LSERAGM
Sbjct: 400 KSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGM 459
Query: 442 RANVAIVDLTNVSVLANKLEESFI 465
R NVAI+DLT S+LA K+EESFI
Sbjct: 460 RDNVAIIDLTTTSILAPKIEESFI 483
>gi|79404523|ref|NP_188307.3| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis thaliana]
gi|374095486|sp|Q93Y39.3|RH13_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|332642351|gb|AEE75872.1| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis thaliana]
Length = 826
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/321 (70%), Positives = 267/321 (83%), Gaps = 2/321 (0%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
+++ VS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKAC
Sbjct: 163 QDASAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFN 222
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLR 265
AA+QGK D+IGAAETGSGKTLAFGLPI+QRLL+EREK GK+ KGEEA+KYA G+LR
Sbjct: 223 VAAYQGK-DVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLR 281
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
ALIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGRLW
Sbjct: 282 ALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLW 341
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTC 385
ELMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ NEG+++ ++
Sbjct: 342 ELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSN 401
Query: 386 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIETLSERAGMRAN 444
TV ++ +KKRQT VFSATIALS+DFRKKLK GS K KQS +G +NSIE LSERAGMR N
Sbjct: 402 DTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDN 461
Query: 445 VAIVDLTNVSVLANKLEESFI 465
VAI+DLT S+LA K+EESFI
Sbjct: 462 VAIIDLTTTSILAPKIEESFI 482
>gi|7939577|dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 832
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/321 (70%), Positives = 267/321 (83%), Gaps = 2/321 (0%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
+++ VS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKAC
Sbjct: 163 QDASAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFN 222
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLR 265
AA+QGK D+IGAAETGSGKTLAFGLPI+QRLL+EREK GK+ KGEEA+KYA G+LR
Sbjct: 223 VAAYQGK-DVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLR 281
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
ALIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGRLW
Sbjct: 282 ALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLW 341
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTC 385
ELMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ NEG+++ ++
Sbjct: 342 ELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSN 401
Query: 386 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIETLSERAGMRAN 444
TV ++ +KKRQT VFSATIALS+DFRKKLK GS K KQS +G +NSIE LSERAGMR N
Sbjct: 402 DTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDN 461
Query: 445 VAIVDLTNVSVLANKLEESFI 465
VAI+DLT S+LA K+EESFI
Sbjct: 462 VAIIDLTTTSILAPKIEESFI 482
>gi|15450790|gb|AAK96666.1| ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 797
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/321 (70%), Positives = 267/321 (83%), Gaps = 2/321 (0%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
+++ VS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKAC
Sbjct: 163 QDASAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFN 222
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLR 265
AA+QGK D+IGAAETGSGKTLAFGLPI+QRLL+EREK GK+ KGEEA+KYA G+LR
Sbjct: 223 VAAYQGK-DVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLR 281
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
ALIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGRLW
Sbjct: 282 ALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLW 341
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTC 385
ELMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ NEG+++ ++
Sbjct: 342 ELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSN 401
Query: 386 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIETLSERAGMRAN 444
TV ++ +KKRQT VFSATIALS+DFRKKLK GS K KQS +G +NSIE LSERAGMR N
Sbjct: 402 DTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDN 461
Query: 445 VAIVDLTNVSVLANKLEESFI 465
VAI+DLT S+LA K+EESFI
Sbjct: 462 VAIIDLTTTSILAPKIEESFI 482
>gi|357167963|ref|XP_003581416.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like
[Brachypodium distachyon]
Length = 872
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/442 (54%), Positives = 303/442 (68%), Gaps = 26/442 (5%)
Query: 48 DPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKPG-KKTNTKKRKRSSANEEDPG 106
DPF L G E GGFL LEEID A + + E + +K + ++K+ + G
Sbjct: 93 DPFFVLAGGKE--GGFLELEEIDGADFGIFGGTVEDVEASDRKVGSDQKKKKKKKKRKRG 150
Query: 107 DG----DGDEDGNGVQKE----------------QEKNLKNQKGKKKKKKKKGKKIKTVE 146
G DGD+DG+ E + K +K K K ++ + + V+
Sbjct: 151 HGAERLDGDDDGDCASGELVFESKEEGNKGEKKGKSKKRNRKKRKVKDTEQDSESKEDVD 210
Query: 147 ESVTVSNGPDDAEEELVSEAEIS-TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
+ +G ++ +++ E ++ EF AW ELRLHPLL+K+++RLGFKEPTPIQKAC P
Sbjct: 211 NVEDMQDGIENMKQDNDDELKLGEDEFYAWLELRLHPLLVKAMHRLGFKEPTPIQKACFP 270
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLR 265
A AHQGK D+IGAAETGSGKTLAFGLPI+QRLLEEREKA ++ E + E+ + G LR
Sbjct: 271 AGAHQGK-DVIGAAETGSGKTLAFGLPILQRLLEEREKATRLNVEDKKAMEESSTGGPLR 329
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
ALI+TPTRELA QV DHLKE +K + + VVPIVGG+S EKQERLLK +PE+VVGTPGRLW
Sbjct: 330 ALILTPTRELAKQVCDHLKEASKFLGIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLW 389
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTC 385
ELMS G +HLVELH+LSFFVLDEADRMIE GHF+EL SII+MLP++N S+E T +C
Sbjct: 390 ELMSTGNQHLVELHSLSFFVLDEADRMIERGHFKELHSIIEMLPLSNSSDEQAVRATPSC 449
Query: 386 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSV-NGLNSIETLSERAGMRAN 444
TV +LQ KKRQT VFSAT+ALSA+FR KLK G K S+ + L+SIE LS++AGM+ N
Sbjct: 450 ETVLNLQIKKRQTFVFSATLALSANFRSKLKRGLSTSKASMADNLSSIEALSKQAGMKPN 509
Query: 445 VAIVDLTNVSVLANKLEESFIE 466
IVDLTN S+L KLEESFIE
Sbjct: 510 AEIVDLTNASILPEKLEESFIE 531
>gi|326526415|dbj|BAJ97224.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 872
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/297 (69%), Positives = 243/297 (81%), Gaps = 2/297 (0%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E AW ELRLHPLL+K+++RLGF EPTPIQKACIPA AHQGK D+IGAAETGSGKTLAFG
Sbjct: 236 ELYAWLELRLHPLLIKAMHRLGFNEPTPIQKACIPAGAHQGK-DVIGAAETGSGKTLAFG 294
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
LPI+QRLLEEREK ++ E +EAE + G LRALI+TPTRELA QV DHLKE AK +
Sbjct: 295 LPILQRLLEEREKTTRLHVEDEKEAEGSSTGGPLRALILTPTRELAKQVCDHLKEAAKFL 354
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+ VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HLVELH+LSFFVLDEAD
Sbjct: 355 GIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWELMSSGNQHLVELHSLSFFVLDEAD 414
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
RMIE GHF+E+QSII+MLP++N S+E + T +C TV++LQ KKRQT VFSAT+ALSA+
Sbjct: 415 RMIERGHFKEVQSIIEMLPLSNSSDEQTVKATSSCETVANLQIKKRQTFVFSATLALSAN 474
Query: 411 FRKKLKHG-SLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
FRKKLK G S + L+SIE LS++AGM+ N IVDLTN S+L KLEESFIE
Sbjct: 475 FRKKLKRGLSTSKASTAEDLSSIEELSKQAGMKPNAEIVDLTNASILPEKLEESFIE 531
>gi|414586362|tpg|DAA36933.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 842
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/477 (51%), Positives = 316/477 (66%), Gaps = 33/477 (6%)
Query: 19 NRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNL-- 76
N++ R++K + ++ +S S DPF L G E GGFL LEEIDEA + +
Sbjct: 29 NKKNRSKKQPKRAGADTDGLSSGASTMVEDPFFVLAGGKE--GGFLDLEEIDEADFGIFG 86
Query: 77 -QIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDG---------DEDGNGVQKEQEKNLK 126
+ + + K+K+ + + GDG+G + D V+K ++K
Sbjct: 87 GVLDDVGQSVEEAGKDHGKKKKKTKKRKRGGDGEGFSGDAALVVENDQVDVEKVEKKVED 146
Query: 127 NQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTE--------------- 171
+KG KK K+K K + V+++ +D + + + TE
Sbjct: 147 GEKGDKKGKRKMNMKKRKVKDNEMNRESDEDVASDKAEDMQDDTENMEQNEDDELILGED 206
Query: 172 -FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
AW ELRLHPLL+K++ RLGFKEPTPIQK+C PAAAH+GK D+IGAAETGSGKTLAFG
Sbjct: 207 DVSAWRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHRGK-DVIGAAETGSGKTLAFG 265
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
LP++QRLLEEREKA + L+++ E+ E+ + LRALI+TPTRELA QV DHLK+VAK +
Sbjct: 266 LPVLQRLLEEREKATR-LQQEDEKMEERSCGSPLRALILTPTRELAKQVCDHLKDVAKFL 324
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+ VVPIVGG+S EKQERLLK +PE+VVGTPGRLWE MS +HLVELH+LSFF+LDEAD
Sbjct: 325 GIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWEHMSMNNQHLVELHSLSFFILDEAD 384
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
RMIE GHFRELQSII+MLP+TNGS+E + C TV LQ KKRQT VFSAT+ALS++
Sbjct: 385 RMIERGHFRELQSIIEMLPLTNGSDEQAARTMPNCETVPILQIKKRQTFVFSATLALSSN 444
Query: 411 FRKKLKHGSLKLKQSV-NGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
FRKKLK G K S + ++SIE LS++AGM++N IVDLT S+L KLEESFIE
Sbjct: 445 FRKKLKRGLSTSKASTPDDVSSIEALSKQAGMKSNAEIVDLTKASILPEKLEESFIE 501
>gi|293332967|ref|NP_001169277.1| uncharacterized protein LOC100383140 [Zea mays]
gi|224028341|gb|ACN33246.1| unknown [Zea mays]
Length = 842
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/477 (51%), Positives = 315/477 (66%), Gaps = 33/477 (6%)
Query: 19 NRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNL-- 76
N++ R++K + ++ +S S DPF L G E GGFL LEEIDEA + +
Sbjct: 29 NKKNRSKKQPKRAGADTDGLSSGASTMVEDPFFVLAGGKE--GGFLDLEEIDEADFGIFG 86
Query: 77 -QIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDG---------DEDGNGVQKEQEKNLK 126
+ + + K+K+ + + GDG+G + D V+K ++K
Sbjct: 87 GVLDDVGQSVEEAGKDHGKKKKKTKKRKRGGDGEGFSGDAALVVENDQVDVEKVEKKVED 146
Query: 127 NQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTE--------------- 171
+KG KK K+K K + V+++ +D + + + TE
Sbjct: 147 GEKGDKKGKRKMNMKKRKVKDNEMNRESDEDVASDKAEDMQDDTENMEQNEDDELILGED 206
Query: 172 -FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
AW ELRLHPLL+K++ RLGFKEPTPIQK+C PAAAH+GK D+IGAAETGSGKTLAFG
Sbjct: 207 DVSAWRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHRGK-DVIGAAETGSGKTLAFG 265
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
LP++QRLLEEREKA + L+++ E+ E+ + LRALI+TPTRELA QV DHLK+VAK +
Sbjct: 266 LPVLQRLLEEREKATR-LQQEDEKMEERSCGSPLRALILTPTRELAKQVCDHLKDVAKFL 324
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+ VVPIVGG+S EKQERLLK +PE+VVGTPGRLWE MS +HLVELH+LSFF+LDEAD
Sbjct: 325 GIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWEHMSMNNQHLVELHSLSFFILDEAD 384
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
RMIE GHFRELQSII+MLP+TNGS E + C TV LQ KKRQT VFSAT+ALS++
Sbjct: 385 RMIERGHFRELQSIIEMLPLTNGSGEQAARTMPNCETVPILQIKKRQTFVFSATLALSSN 444
Query: 411 FRKKLKHGSLKLKQSV-NGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
FRKKLK G K S + ++SIE LS++AGM++N IVDLT S+L KLEESFIE
Sbjct: 445 FRKKLKRGLSTSKASTPDDVSSIEALSKQAGMKSNAEIVDLTKASILPEKLEESFIE 501
>gi|242076434|ref|XP_002448153.1| hypothetical protein SORBIDRAFT_06g022240 [Sorghum bicolor]
gi|241939336|gb|EES12481.1| hypothetical protein SORBIDRAFT_06g022240 [Sorghum bicolor]
Length = 807
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/312 (65%), Positives = 249/312 (79%), Gaps = 7/312 (2%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
D +E ++ E ++S W ELRLHPLL+K++ RLGFKEPTPIQK+C PAAAHQGK D+
Sbjct: 200 DKDDELILGEDDVSE----WRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHQGK-DV 254
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 275
IGAAETGSGKTLAFGLPI+QRLLEEREKA + L ++G++ ++ + LRALI+TPTREL
Sbjct: 255 IGAAETGSGKTLAFGLPILQRLLEEREKAAR-LHQEGDKMDERSGGSPLRALILTPTREL 313
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
A QV DHLK+ AK + + VVPIVGG+S EKQERLLK +PE+VVGTPGRLWE MS +HL
Sbjct: 314 AKQVCDHLKDAAKFLGIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWEHMSMNNQHL 373
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
VELH+LSFFVLDEADRMIE GHFRELQSII+MLP+TNGS+E ++ C TV +LQ KK
Sbjct: 374 VELHSLSFFVLDEADRMIERGHFRELQSIIEMLPLTNGSDEQSAKTMPNCETVPNLQIKK 433
Query: 396 RQTLVFSATIALSADFRKKLKHGSLKLKQSV-NGLNSIETLSERAGMRANVAIVDLTNVS 454
RQT VFSAT+ALS++FRKKLK G K S + ++SIE LS++AGM+ N IVDLT S
Sbjct: 434 RQTFVFSATLALSSNFRKKLKRGLSTSKASTPDDVSSIEALSKQAGMKPNAEIVDLTKAS 493
Query: 455 VLANKLEESFIE 466
+L KLEESFIE
Sbjct: 494 ILPEKLEESFIE 505
>gi|115459372|ref|NP_001053286.1| Os04g0510400 [Oryza sativa Japonica Group]
gi|158513183|sp|A2XVF7.2|RH13_ORYSI RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|158513708|sp|A3AVH5.2|RH13_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|32488303|emb|CAE03369.1| OSJNBb0065L13.12 [Oryza sativa Japonica Group]
gi|113564857|dbj|BAF15200.1| Os04g0510400 [Oryza sativa Japonica Group]
gi|116311068|emb|CAH67998.1| OSIGBa0157K09-H0214G12.9 [Oryza sativa Indica Group]
Length = 832
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/297 (68%), Positives = 239/297 (80%), Gaps = 2/297 (0%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E AW ELRLHPLL+ ++ RLGFKEPTPIQKAC PAAAHQGK D+IGAAETGSGKTLAFG
Sbjct: 196 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGK-DVIGAAETGSGKTLAFG 254
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
LPI+QRLLEE+EKA ++ E ++ + + LRALI+TPTRELA QV DHLKE AK +
Sbjct: 255 LPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFL 314
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
++VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HL++LH+LSFFVLDEAD
Sbjct: 315 RIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEAD 374
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
RMIE GHF ELQSII+MLP+TNGS+E T +C TV LQ KKRQT VFSAT+ALSA+
Sbjct: 375 RMIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSAN 434
Query: 411 FRKKLKHGSLKLKQSVN-GLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
FRKKLK G + K S + L+SIE LS++A M+ N IVDLT S+L KLEESFIE
Sbjct: 435 FRKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIE 491
>gi|222629189|gb|EEE61321.1| hypothetical protein OsJ_15428 [Oryza sativa Japonica Group]
Length = 776
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/297 (68%), Positives = 239/297 (80%), Gaps = 2/297 (0%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E AW ELRLHPLL+ ++ RLGFKEPTPIQKAC PAAAHQGK D+IGAAETGSGKTLAFG
Sbjct: 140 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGK-DVIGAAETGSGKTLAFG 198
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
LPI+QRLLEE+EKA ++ E ++ + + LRALI+TPTRELA QV DHLKE AK +
Sbjct: 199 LPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFL 258
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
++VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HL++LH+LSFFVLDEAD
Sbjct: 259 RIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEAD 318
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
RMIE GHF ELQSII+MLP+TNGS+E T +C TV LQ KKRQT VFSAT+ALSA+
Sbjct: 319 RMIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSAN 378
Query: 411 FRKKLKHGSLKLKQSVN-GLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
FRKKLK G + K S + L+SIE LS++A M+ N IVDLT S+L KLEESFIE
Sbjct: 379 FRKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIE 435
>gi|218195193|gb|EEC77620.1| hypothetical protein OsI_16604 [Oryza sativa Indica Group]
Length = 776
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/297 (68%), Positives = 239/297 (80%), Gaps = 2/297 (0%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E AW ELRLHPLL+ ++ RLGFKEPTPIQKAC PAAAHQGK D+IGAAETGSGKTLAFG
Sbjct: 140 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGK-DVIGAAETGSGKTLAFG 198
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
LPI+QRLLEE+EKA ++ E ++ + + LRALI+TPTRELA QV DHLKE AK +
Sbjct: 199 LPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFL 258
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
++VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HL++LH+LSFFVLDEAD
Sbjct: 259 RIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEAD 318
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
RMIE GHF ELQSII+MLP+TNGS+E T +C TV LQ KKRQT VFSAT+ALSA+
Sbjct: 319 RMIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSAN 378
Query: 411 FRKKLKHGSLKLKQSVN-GLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
FRKKLK G + K S + L+SIE LS++A M+ N IVDLT S+L KLEESFIE
Sbjct: 379 FRKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIE 435
>gi|168023770|ref|XP_001764410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684274|gb|EDQ70677.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/333 (53%), Positives = 231/333 (69%), Gaps = 17/333 (5%)
Query: 135 KKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFK 194
+K++ +I+ +E + ++ DD EE + AW +LRL+PLLM+++ +L F
Sbjct: 79 RKREDMEIERLENTPSIEA--DDIEE---------IDMSAWAQLRLNPLLMRALMKLKFS 127
Query: 195 EPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEE 254
+PT IQ+ CI AAA+QGK D+IGAAETGSGKTLAFGLPI+QRLL++ EK + + ++
Sbjct: 128 KPTHIQEKCIAAAAYQGK-DVIGAAETGSGKTLAFGLPILQRLLDDHEKIQR--KSGFDK 184
Query: 255 AEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARP 314
A K G LRALI+TPTRELALQV DHL+ A+ N VVPIVGGM+ +KQ+RLL+ +P
Sbjct: 185 ASKKQSGGPLRALIVTPTRELALQVCDHLRAAAQFTNFNVVPIVGGMALQKQQRLLRYQP 244
Query: 315 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 374
++VVGTPGRLWELMS GE HL++L LSFFVLDEADRM+E GHF+ELQSI+DMLP T
Sbjct: 245 QIVVGTPGRLWELMSAGEAHLLDLAQLSFFVLDEADRMVERGHFKELQSIMDMLPKTGPE 304
Query: 375 NEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQ-SVNGLNSIE 433
+ E + + + KKRQTLVFSAT++L F+KKLK G K S S+
Sbjct: 305 DTTMKEDFTETIVIEPV--KKRQTLVFSATLSLPPGFKKKLKRGFFNDKSTSKKNEYSVA 362
Query: 434 TLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+L +RA MR N I+DLT VLA KLEES I+
Sbjct: 363 SLIQRAAMRDNAVIIDLTTKDVLARKLEESVIQ 395
>gi|302781030|ref|XP_002972289.1| hypothetical protein SELMODRAFT_97519 [Selaginella moellendorffii]
gi|300159756|gb|EFJ26375.1| hypothetical protein SELMODRAFT_97519 [Selaginella moellendorffii]
Length = 524
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 213/292 (72%), Gaps = 15/292 (5%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
WNELRLHP L+ ++ LGF PTPIQKACIPAAAH+GK D+IGAAETGSGKTLAFG+PI+
Sbjct: 1 WNELRLHPSLLTALSTLGFTTPTPIQKACIPAAAHKGK-DVIGAAETGSGKTLAFGIPIL 59
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRLL+ER+K +L + A LRALI+TPTRELALQ+ DH++ VAK +++V
Sbjct: 60 QRLLDERDK---LLRQNN-----VASDSPLRALIVTPTRELALQICDHIRAVAKFTDIKV 111
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
PIVGG+ST+KQERLLK RP +VVGTPGRLWELMS GE HLV+L +SFF+LDEADRMIE
Sbjct: 112 APIVGGISTQKQERLLKRRPAIVVGTPGRLWELMSSGESHLVQLQEISFFILDEADRMIE 171
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 414
GHF+EL+SIID+LP E ++ +K+RQTLVFSAT+ L DF+KK
Sbjct: 172 KGHFQELESIIDLLPKHGEPREDLDPADNVFLSA----KKRRQTLVFSATLTLPPDFKKK 227
Query: 415 LKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
LK K+S +S+ LSERAG+ +VDLT+ +V+A KL ES IE
Sbjct: 228 LKKSYGARKKSEQ--HSLSLLSERAGLSDTAEVVDLTSKNVVAEKLTESVIE 277
>gi|302804899|ref|XP_002984201.1| hypothetical protein SELMODRAFT_119748 [Selaginella moellendorffii]
gi|300148050|gb|EFJ14711.1| hypothetical protein SELMODRAFT_119748 [Selaginella moellendorffii]
Length = 521
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/293 (59%), Positives = 215/293 (73%), Gaps = 16/293 (5%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
WNELRLHP L++++ LGF PTPIQKACIPAAAH+GK D+IGAAETGSGKTLAFG+PI+
Sbjct: 1 WNELRLHPSLLRALSILGFTTPTPIQKACIPAAAHKGK-DVIGAAETGSGKTLAFGIPIL 59
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQV-TDHLKEVAKGINVR 293
QRLL+ER+K +L + A LRALI+TPTRELALQV DH++ VAK +++
Sbjct: 60 QRLLDERDK---LLRQNN-----VASDSPLRALIVTPTRELALQVICDHIRAVAKFTDIK 111
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V PIVGG+ST+KQERLLK RP +VVGTPGRLWELMS GE HLV+L +SFF+LDEADRMI
Sbjct: 112 VAPIVGGISTQKQERLLKRRPAIVVGTPGRLWELMSSGESHLVQLQEISFFILDEADRMI 171
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 413
E GHF+EL+SIID+LP S E ++ +K+RQTLVFSAT+ L DF+K
Sbjct: 172 EKGHFQELESIIDLLPKHGESREDLDPADNVFLSA----KKRRQTLVFSATLTLPPDFKK 227
Query: 414 KLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
KLK K+S +S+ LSERAG+ +VDLT+ +V+A KL ES IE
Sbjct: 228 KLKKSYGARKKSEQ--HSLSLLSERAGLSDTAEVVDLTSKNVVAEKLTESVIE 278
>gi|147810431|emb|CAN65340.1| hypothetical protein VITISV_038405 [Vitis vinifera]
Length = 458
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 166/281 (59%), Positives = 192/281 (68%), Gaps = 32/281 (11%)
Query: 18 PN-RRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GF 63
PN RRKRT + + E+L SL WN S D DPF+ VGS+EL+G GF
Sbjct: 6 PNARRKRTAVNPDLERLESLPWNPSLPDVD-DPFSLFVGSDELEGALHGFSRETSGESGF 64
Query: 64 LSLEEIDEASYNLQI--PKPE--KGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQK 119
LSLEEIDE+ Y L+I P PE KG P + +KKRK S N+ GDG ED G ++
Sbjct: 65 LSLEEIDESEYGLEIHEPGPEDKKGNPKQSKKSKKRKSSGDND---SSGDGVED--GTEE 119
Query: 120 EQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELR 179
E +K KKKKKKK KK +T EES TV + DD E + V EA EF WNELR
Sbjct: 120 EVVDKKNFKKKKKKKKKKVTKKNQTNEESATVVD-KDDVEGDSVDEA----EFYEWNELR 174
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
+HPLLMKSI+RLGFK+PTPIQKACIPAAAHQGK D++GA+ETGSGKTLA GLPI+QRLLE
Sbjct: 175 IHPLLMKSIHRLGFKQPTPIQKACIPAAAHQGK-DVVGASETGSGKTLALGLPILQRLLE 233
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVT 280
EREKA + L E GE EKYA G LRALIITPTRELALQ+T
Sbjct: 234 EREKAAEPLAENGE--EKYAEGGILRALIITPTRELALQIT 272
>gi|412987724|emb|CCO20559.1| predicted protein [Bathycoccus prasinos]
Length = 951
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 169/437 (38%), Positives = 233/437 (53%), Gaps = 74/437 (16%)
Query: 39 NSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKPGKKTNTKKRKRS 98
N+++ A D + FLVGS+E GF+SLE L + K E K KT T +K +
Sbjct: 76 NNNWHAIDVNS-QFLVGSSE--EGFVSLEV-------LSLEK-EGEKDDAKTKTTVKKSA 124
Query: 99 SANEEDPGDG--------DGDEDGNGVQKEQEKN-LKNQKGKKKKKKKKGKKIKTVEESV 149
S N+ D DG + + D NG +KE K+ N K + K+KK K K E
Sbjct: 125 SKNDID-DDGSITVRKEKEKENDENGEKKEATKSKASNAKEARILKRKKRWKEKVEEAKK 183
Query: 150 TVSNGPDDA---------------EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFK 194
N D+A E E + AW + LHPLL+K+I +L F
Sbjct: 184 RKRNEKDEAKRGDGETAGGGGGDYENEDDDLLGDEEDVAAWAQYDLHPLLLKAIRKLRFT 243
Query: 195 EPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEE 254
PTPIQ+ + A +G++DI+GAAETGSGKTLAFGLPI+QRL++++E+ E EE
Sbjct: 244 SPTPIQEKVLHPAI-KGRMDIVGAAETGSGKTLAFGLPILQRLMQDKEEEKWYEEYADEE 302
Query: 255 AEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARP 314
K HLRALI+TPTRELALQV L +VA +++ IVGGMS +KQER+LK +P
Sbjct: 303 KPGKGKK-HLRALIVTPTRELALQVAKMLADVAIYTGIQIAAIVGGMSKQKQERVLKKQP 361
Query: 315 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP----- 369
E++V TPGRLWEL+ G+KHL L L+F LDEADRM+E GHF+EL+S+I +P
Sbjct: 362 EIIVATPGRLWELIRDGDKHLTSLERLTFLTLDEADRMVERGHFKELESVIKSIPEPPET 421
Query: 370 ------------------MTNGSNEGQSEQ-------------TQTCVTVSSLQRKKRQT 398
T SN+ ++++ + + + RQT
Sbjct: 422 RRIARSAKLTKRKQPMMAATKVSNDSKTKKGEEEEENEEKNDEESEPAADNRIMARDRQT 481
Query: 399 LVFSATIALSADFRKKL 415
VFSAT+ + + + KL
Sbjct: 482 FVFSATLTVPDEVKYKL 498
>gi|340374409|ref|XP_003385730.1| PREDICTED: hypothetical protein LOC100639442 [Amphimedon
queenslandica]
Length = 1012
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 194/347 (55%), Gaps = 58/347 (16%)
Query: 118 QKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNE 177
++ ++K L + K K +K+ KK K V +S TVS + E + +AW+
Sbjct: 519 ERRRKKQLLKARLKAKVAEKQHKKRKKVVQS-TVS----------IEEPKAVKGGEAWSS 567
Query: 178 LRLHPLLMKSIY-RLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
L LH +++S+ RLGF PT IQ+ IP A + GK DIIGAAETGSGKTLAFGLP++
Sbjct: 568 LGLHDTIVRSLVDRLGFSTPTEIQQKAIPPAIN-GKHDIIGAAETGSGKTLAFGLPVLNY 626
Query: 237 LLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
+L R++ L ALI+ PTRELALQV +H+K A N++V
Sbjct: 627 ILTNRQR--------------------LVALILMPTRELALQVVEHIKAAAYYTNIKVCA 666
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMS+EKQ+RLLK PE+VVGTPGRLW++M HL L F ++DEADRMIE G
Sbjct: 667 VVGGMSSEKQDRLLKLCPEIVVGTPGRLWQMMKEECPHLNNFSQLRFLIIDEADRMIEQG 726
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HFREL I++ L S + K QT+VFSAT+ L R+K+
Sbjct: 727 HFRELTLILERLS-------------------SQVLSDKYQTMVFSATLTLP---RRKIG 764
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
K K ++G SIE + +AG+ +DLT+ ++EES
Sbjct: 765 R---KRKSKMSGEESIENVILKAGLSETAVTIDLTHKHGTVERIEES 808
>gi|145353253|ref|XP_001420934.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581170|gb|ABO99227.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 394
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 132/200 (66%), Gaps = 20/200 (10%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
+ AW E LHPL+M++I GF PTPIQ+ C+ A +G+ DIIGAA+TGSGKTLAF
Sbjct: 14 CDVSAWFEFDLHPLIMRAIQDCGFTTPTPIQRECL-LPATKGRCDIIGAAQTGSGKTLAF 72
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 289
LPI+QRLL + G + LRALI+ PTRELALQV ++ VA
Sbjct: 73 ALPILQRLLSQ-----------GIDV--------LRALIVAPTRELALQVCAMMRAVAVY 113
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
+ V P+VGGMS EKQERLL +P ++V TPGR+W+ M G +HL EL LSFFVLDEA
Sbjct: 114 TKIDVCPVVGGMSKEKQERLLNRKPAVIVATPGRMWDTMQSGHEHLTELSALSFFVLDEA 173
Query: 350 DRMIENGHFRELQSIIDMLP 369
DRM+E GHF EL SII +P
Sbjct: 174 DRMVERGHFSELTSIIQNIP 193
>gi|330797646|ref|XP_003286870.1| hypothetical protein DICPUDRAFT_150880 [Dictyostelium purpureum]
gi|325083172|gb|EGC36632.1| hypothetical protein DICPUDRAFT_150880 [Dictyostelium purpureum]
Length = 903
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 151/230 (65%), Gaps = 20/230 (8%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
+E + + W L L PL++K + LGF++PT IQ A +P A G DIIGAA+TGS
Sbjct: 239 TEEQNQLDMSEWTALNLDPLIIKGLRSLGFEKPTEIQSAVLPVAISNG-YDIIGAAQTGS 297
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-------------------L 264
GKTLAFG+P++QR+L+ K G+ +E++GE +K + L
Sbjct: 298 GKTLAFGIPMVQRILQHLRKHGQSVEKEGETRDKQIEEEGDEEEEEEEESTGRSEEHRKL 357
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
+L+I PTRELA+QVT+H+K + N++VV IVGG++ ++Q+R+L RPE+VV TPGRL
Sbjct: 358 YSLVICPTRELAIQVTNHIKSIIAFTNLKVVSIVGGLAQQRQQRILTKRPEIVVATPGRL 417
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 374
WEL++ G KHL+EL++L +DEADRM+E GHF EL++I+ LP G+
Sbjct: 418 WELITEGHKHLIELNSLLCLGIDEADRMVEQGHFAELENILKTLPTFKGA 467
>gi|3776003|emb|CAA09204.1| RNA helicase [Arabidopsis thaliana]
Length = 451
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 131/153 (85%), Gaps = 1/153 (0%)
Query: 315 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 374
E+VV TPGRLWELMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+
Sbjct: 1 EIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKP 60
Query: 375 NEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIE 433
NEG+++ ++ TV ++ +KKRQT VFSATIALS+DFRKKLK GS K KQS +G +NSIE
Sbjct: 61 NEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIE 120
Query: 434 TLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
LSERAGMR NVAI+DLT S+LA K+EESFI+
Sbjct: 121 VLSERAGMRDNVAIIDLTTTSILAPKIEESFIK 153
>gi|427788943|gb|JAA59923.1| Putative gamete proteinration [Rhipicephalus pulchellus]
Length = 691
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 178/297 (59%), Gaps = 27/297 (9%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
S + AW + +++++ L F EPT IQ +PAA + +DI+GAAETGSGKTLA
Sbjct: 116 SPDMSAWLNCHVPEPVLRALAELNFTEPTEIQAQTLPAAI-RDHLDIMGAAETGSGKTLA 174
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 288
FG+P++ ++E + + E K P L+AL++TPTRELA+QVT H+++VAK
Sbjct: 175 FGIPLLHHIMERKSRLS------AEGDTKAMP---LQALVLTPTRELAIQVTRHIQDVAK 225
Query: 289 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
NVR+V +VGG+S EKQ RLLK +PE+VV TPGRLWEL+ G H+ ++ + + V+DE
Sbjct: 226 YTNVRIVNVVGGLSAEKQLRLLKRKPEIVVATPGRLWELVDQGAPHVSDVSKVRYLVIDE 285
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 408
ADRM+E GHF +L ++D+ M S +G+ ++++RQ VFSAT+ +
Sbjct: 286 ADRMVEKGHFEDLTRLLDI--MNAPSEDGE-------------EKRRRQNFVFSATLTMV 330
Query: 409 ADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
D ++LK+ K K S +E L G+ + +VDLT A L ES I
Sbjct: 331 HDLPRRLKNKPKKRKLSEK--EKVEELMHTIGISSKPKVVDLTRKLGTAELLCESRI 385
>gi|346471193|gb|AEO35441.1| hypothetical protein [Amblyomma maculatum]
Length = 684
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 186/315 (59%), Gaps = 32/315 (10%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+G DD+ + V + + AW + +++++ L F EPT IQ +PAA +
Sbjct: 97 DGTDDSSPD-VPKVSRCDDMSAWLNCYVPEQVLRALAELKFTEPTEIQAQTLPAAI-RDH 154
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
+DI+GAAETGSGKTLAFG+P++ ++E + L + E A + P L+AL++TPT
Sbjct: 155 MDIMGAAETGSGKTLAFGIPLLHHIMERK------LRQPEECASQAMP---LQALVLTPT 205
Query: 273 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 332
RELA+QVT HL++VAK NVR+V ++GG+S EKQ RLLK +PE+VV TPGRLWEL+ G
Sbjct: 206 RELAIQVTRHLQDVAKYTNVRIVNVIGGLSAEKQLRLLKRKPEIVVATPGRLWELVDQGA 265
Query: 333 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 392
H+ ++ + + V+DEADRM+E GHF +L ++++ M S EG +
Sbjct: 266 PHVSDVSKVRYLVIDEADRMVEKGHFEDLTRLLEV--MNAPSEEGA-------------E 310
Query: 393 RKKRQTLVFSATIALSADFRKKL--KHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDL 450
+++RQ VFSAT+ + D K++ KH KL + +E L G+ + +VDL
Sbjct: 311 KRRRQNFVFSATLTMVHDMPKRMKNKHKKHKLTEK----EKVEELMCTIGISSKPKVVDL 366
Query: 451 TNVSVLANKLEESFI 465
T A L ES I
Sbjct: 367 TRKLGTAETLCESRI 381
>gi|66812546|ref|XP_640452.1| hypothetical protein DDB_G0281841 [Dictyostelium discoideum AX4]
gi|74997024|sp|Q54TD7.1|DDX24_DICDI RecName: Full=ATP-dependent RNA helicase ddx24; AltName: Full=DEAD
box protein 24
gi|60468476|gb|EAL66480.1| hypothetical protein DDB_G0281841 [Dictyostelium discoideum AX4]
Length = 940
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 151/235 (64%), Gaps = 23/235 (9%)
Query: 158 AEEELVS-EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
+E++ +S E + + WN L PL++K + LGF +PT IQ + IP A G D+I
Sbjct: 278 SEQKTISKEEQDQLDMSEWNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSG-YDVI 336
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH------------- 263
GAA+TGSGKTLAFG+P++QR+L+ K G+ +E K + + +
Sbjct: 337 GAAQTGSGKTLAFGIPMVQRILQHLRKHGQNVENKANKQQNDNDDENEDVEEEEEEEEEE 396
Query: 264 --------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPE 315
L +L+I PTRELA+QVT+H+K + N++V+ IVGGM++++Q+R+L RPE
Sbjct: 397 GRSKEYRKLFSLVICPTRELAIQVTNHIKSIISHTNLKVISIVGGMASQRQQRVLSKRPE 456
Query: 316 LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
+VV TPGRLWEL++ G +HLVEL +L +DEADRM+E GHF EL+SI+ LP+
Sbjct: 457 IVVATPGRLWELITEGHQHLVELESLLCLGIDEADRMVEQGHFAELESILKTLPI 511
>gi|156404211|ref|XP_001640301.1| predicted protein [Nematostella vectensis]
gi|156227434|gb|EDO48238.1| predicted protein [Nematostella vectensis]
Length = 566
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/243 (46%), Positives = 156/243 (64%), Gaps = 6/243 (2%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W L + P +++++ GF +PTPIQ IP A + DIIGAAETGSGKTLAFG+PI+
Sbjct: 4 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHR-DIIGAAETGSGKTLAFGIPII 62
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
Q + E K K + ++ +G+ L ALI+ PTRELALQV DHL + AK +V+
Sbjct: 63 QHI--EAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVK 120
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V IVGGM+ KQ+RLLK RPE+VV TPGRLWEL+S E+H+ + L + V+DEADRM+
Sbjct: 121 VAAIVGGMAAPKQQRLLKQRPEIVVATPGRLWELISQQEEHVSNIQLLRYLVIDEADRMV 180
Query: 354 ENGHFRELQSIIDMLPM-TNGSNEGQSEQTQTCVTVSSLQRKKR-QTLVFSATIALSADF 411
E GH+ EL SI++++ + +G+ E E + S K R Q +FSAT+ L F
Sbjct: 181 EQGHYEELSSILELIHLKKSGNMEVDQEDAERPSNSSKTPEKARLQKFIFSATLTLPKSF 240
Query: 412 RKK 414
+K+
Sbjct: 241 KKR 243
>gi|281207739|gb|EFA81919.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 932
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 138/223 (61%), Gaps = 24/223 (10%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
+ AWN+ L PLL+K + LG+ EPT IQ IPAA G +DIIGAAETGSGKTLAF
Sbjct: 309 VDISAWNQYDLDPLLVKGLKALGYGEPTEIQSQVIPAALKNG-LDIIGAAETGSGKTLAF 367
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAE-KYAP----------------------KGHLRA 266
G+P++ +L +E++ + K P +GHL +
Sbjct: 368 GIPMLHNILTYLRSINHPVEKQNINVDGKMKPLVEQDDEEEEEEEEEEETATRKQGHLYS 427
Query: 267 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 326
LI+ PTRELA+QV +HLK ++ + VV +VGGM+ +KQ RLL RPE+VV TPGRLWE
Sbjct: 428 LIMCPTRELAIQVANHLKSISYFTTISVVTVVGGMAAQKQIRLLGRRPEIVVATPGRLWE 487
Query: 327 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
L+ G +HL++L L F +DEADRM+E GHF E+ SI+ MLP
Sbjct: 488 LIQDGNEHLLDLTHLMCFGIDEADRMVEKGHFAEVDSILKMLP 530
>gi|308810583|ref|XP_003082600.1| RNA Helicase (ISS) [Ostreococcus tauri]
gi|116061069|emb|CAL56457.1| RNA Helicase (ISS) [Ostreococcus tauri]
Length = 1211
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/335 (39%), Positives = 174/335 (51%), Gaps = 47/335 (14%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
+ AW E LHPL++++I GF PTPIQ+ C+ A +G+ DIIGAA+TGSGKTLAF
Sbjct: 266 CDISAWFEFDLHPLILRAIQDCGFTSPTPIQRECLHPAT-KGRYDIIGAAQTGSGKTLAF 324
Query: 230 GLPIMQRLLEEREKAGKMLEEK-----GEEAEKYAPKGHLRALIITPTRELALQVTDHLK 284
LPI+ RLL E G L E G+E E LRALI+ PTRELALQV ++
Sbjct: 325 ALPILHRLLSE----GIGLPEDYPLKDGKEREVL--PDVLRALIVCPTRELALQVCAMMR 378
Query: 285 EVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
VA + V P+V + L P ++V TPGRLW+ M G + E LSFF
Sbjct: 379 AVAVYTKIDVCPVVRWYVEREARATLNRMPAIIVATPGRLWDTMQSGHAAVTEFGALSFF 438
Query: 345 VLDEADRMIENGHFRELQSIIDML---------------------PMTNGSNEGQSEQTQ 383
VLDEADRMI+ GHF+EL SII + P+ N + +
Sbjct: 439 VLDEADRMIQRGHFKELTSIIQNIPEPPRVKRAGGAAKSKEESDAPVDNFAEDEDDVNRA 498
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLK----QSVNGLNSIETL 435
+ + Q RQT VFSAT+ + R+KLK G S K + Q +G S+E+L
Sbjct: 499 KALALRPKQMLDRQTFVFSATLTVPDSVRRKLKKGKAPTSAKPRKGSAQPQSG--SLESL 556
Query: 436 SERAGMRANVAIVDLTNV----SVLANKLEESFIE 466
E V +VDLT + +A+ + ES +E
Sbjct: 557 MEAVPFYGRVKMVDLTPIERKGGAVASSIAESALE 591
>gi|348531313|ref|XP_003453154.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Oreochromis niloticus]
Length = 847
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 182/346 (52%), Gaps = 72/346 (20%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
+ + AW +L + P +++++ LGF PTPIQ C+P A + ++DI+GAAETGSGKTLA
Sbjct: 238 NVDMSAWKDLFVPPPVLRALSSLGFGSPTPIQALCLPPAI-RDRMDILGAAETGSGKTLA 296
Query: 229 FGLPIMQRLLE----EREKAGKMLEEKGEEAEKY-------------------------- 258
FG+PI+ +LE E K+ + +E+G EA K
Sbjct: 297 FGIPIIHTILEWKHNEYTKSAEEDQEEGVEASKENDEDAEDQNQGDSDEDEHSDVEDEQL 356
Query: 259 ---------------APKGH----LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
P G L L++TPTRELA+QV H+ VAK +++ +VG
Sbjct: 357 GCVRVIKNADFDFDEKPAGAQSRPLLGLVLTPTRELAVQVKHHIDAVAKFTDIKTALVVG 416
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
GM+ +KQ R+LK RPE+++ TPGRLW+L+ HLV L L V+DEADRM+E GHF
Sbjct: 417 GMAQQKQRRVLKRRPEIIIATPGRLWDLIKERHPHLVNLRQLRCLVIDEADRMVERGHFA 476
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
EL+++++ML T+ + RQT VFSAT+ + +L
Sbjct: 477 ELENLLEMLNTTHFN-------------------PTRQTFVFSATLTMVHSLPTRLLQ-- 515
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
K K++++ N +E L E+ G+++ +VDLT L E+ I
Sbjct: 516 -KKKKNLDQRNKLEILMEKVGIKSKPKVVDLTRKEATVETLIETQI 560
>gi|440796416|gb|ELR17525.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 926
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 137/195 (70%), Gaps = 10/195 (5%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W LHP LM++I F PTPIQ+ + AA + K D++G AETGSGKTLA+GLPI
Sbjct: 256 SWQHFNLHPTLMEAIKEYKFFSPTPIQEKALTAALREDK-DVVGVAETGSGKTLAYGLPI 314
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ +L ++RE+ E G E ++ L+AL++ PTRELA+QV+D LK +AK +
Sbjct: 315 LHKLTKKREQE----ERDGVEKDR-----RLKALLLAPTRELAVQVSDQLKLIAKHTPIT 365
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VVP++GG++ +KQ RLL +PE+VV TPGRLWEL++GG+ L + L F V+DEADRM+
Sbjct: 366 VVPVIGGLAPQKQVRLLSKKPEIVVATPGRLWELINGGDPFLGDCTGLEFLVIDEADRMV 425
Query: 354 ENGHFRELQSIIDML 368
E GHFREL+SII ++
Sbjct: 426 ETGHFRELKSIITLI 440
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 395 KRQTLVFSATIALSADFRKKL--KHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTN 452
KRQT +FSAT+ +++ R KL K + + +VN L + L G ++DLT
Sbjct: 572 KRQTFIFSATLTIASQGRAKLGPKPSTNSNRAAVNALAQVSKL---VGFEREKKVIDLTT 628
Query: 453 VSVLANKLEESFIE 466
V+ + LEE+ I+
Sbjct: 629 KKVVVSTLEEAVIQ 642
>gi|198437354|ref|XP_002125842.1| PREDICTED: similar to CG9143 CG9143-PA [Ciona intestinalis]
Length = 719
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 175/320 (54%), Gaps = 48/320 (15%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
+ + AW L + ++K++ L F +P PIQ+ CIP A + K DI+GAAETGSGKTLA
Sbjct: 159 TVDMSAWQNLYVPETVLKALAELRFTKPMPIQEQCIPVAI-RDKRDILGAAETGSGKTLA 217
Query: 229 FGLPIMQRLLEEREKAGKMLEE----------------------KGEEAEKYAPKGHLRA 266
FG+P++ L+E+RE+ +LE EE E+ P L A
Sbjct: 218 FGIPLLHHLMEDRER--NLLENTENAEIDEDDEHMSDFEDAEPVSKEEIEETQPTKALPA 275
Query: 267 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 326
L++TPTRELA+QV HL +VAK + +VGGM+ +KQ RLL P++V+ TPGRLWE
Sbjct: 276 LVLTPTRELAIQVKKHLTQVAKHTKLWSTVVVGGMAQQKQIRLLNKEPDIVIATPGRLWE 335
Query: 327 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 386
L+ G +L +H L + V+DEADRM+E+GHF EL +++++ +
Sbjct: 336 LLESGHPYLSTIHKLRYLVIDEADRMLEHGHFEELNKLLEVINLKKS------------- 382
Query: 387 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNS-IETLSERAGMRANV 445
+ KRQT +FSAT+ + F + + S N ++ + L ++ G+R
Sbjct: 383 ------KTKRQTFIFSATLT-TVHFTP--NRPNFPTQASSNTKDTKLSKLMKKIGVRNKP 433
Query: 446 AIVDLTNVSVLANKLEESFI 465
+ DLT + A KL E+ I
Sbjct: 434 FVADLTTKKLTAEKLSEAKI 453
>gi|198458698|ref|XP_002138576.1| GA24853 [Drosophila pseudoobscura pseudoobscura]
gi|198136429|gb|EDY69134.1| GA24853 [Drosophila pseudoobscura pseudoobscura]
Length = 807
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 182/342 (53%), Gaps = 64/342 (18%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
+ E E AWN L + +++++ GFK PT IQ +PAA H GK DI+GAAETGS
Sbjct: 199 ASTEYKDELSAWNGLGVPSNILRALAEQGFKAPTQIQSMTLPAAIH-GKKDILGAAETGS 257
Query: 224 GKTLAFGLPIMQRLLEEREK-------------------------------------AGK 246
GKTLAFG+P++ ++E +++ +G
Sbjct: 258 GKTLAFGIPMLAGIMELKQRNASSGIRKAPKVKGAPIAPPADDEHELTPPPDELDHVSGA 317
Query: 247 MLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ 306
E+ E + + L L++TPTRELA+QV +HL AK ++V I GG+S KQ
Sbjct: 318 SDEDSDAEEREQRKQTPLYGLVLTPTRELAVQVRNHLVSAAKYTGIKVAAIFGGLSVAKQ 377
Query: 307 ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
ER+L+ PE+VV TPGRLWEL + G +HL +L LSF V+DE DRM+E GHF EL+S++
Sbjct: 378 ERVLRQCPEIVVATPGRLWELFAQGNQHLNKLDDLSFLVIDETDRMVEKGHFEELRSLLK 437
Query: 367 MLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK----- 421
+L ++E + +Q RQ VFSAT+ L D ++ ++
Sbjct: 438 VL----NADEQKKQQ--------------RQNFVFSATLTLVHDLPDHMQKRNVGKRPKF 479
Query: 422 LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
+KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 480 VKQTVD--QKIESLIEELGI-SQPKIVDITSTQQTAQTLTES 518
>gi|195154787|ref|XP_002018294.1| GL17630 [Drosophila persimilis]
gi|194114090|gb|EDW36133.1| GL17630 [Drosophila persimilis]
Length = 807
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 189/352 (53%), Gaps = 68/352 (19%)
Query: 158 AEEELVSEAEISTEFD----AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKV 213
++EE+ STE++ AWN L + +++++ GFK PT IQ +PAA H GK
Sbjct: 189 SDEEVPQLVPASTEYEDELSAWNGLGVPSNILRALAEQGFKAPTQIQSMTLPAAIH-GKK 247
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREK------------------------------ 243
DI+GAAETGSGKTLAFG+P++ ++E +++
Sbjct: 248 DILGAAETGSGKTLAFGIPMLAGIMELKQRNASSGIRKAPKVKGAPIAPPADDEHELTPP 307
Query: 244 -------AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
+G E+ E + + L L++TPTRELA+QV +HL AK ++V
Sbjct: 308 PDELDHVSGASDEDSDAEEREQRKQTPLYGLVLTPTRELAVQVKNHLVSAAKYTGIKVAA 367
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
I GG+S KQER+L+ PE+VV TPGRLWEL + G +HL +L LSF V+DE DRM+E G
Sbjct: 368 IFGGLSVAKQERVLRQCPEIVVATPGRLWELFAQGNQHLNKLDDLSFLVIDETDRMVEKG 427
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL+S++ +L ++E + +Q RQ VFSAT+ L D ++
Sbjct: 428 HFEELRSLLKVL----NADEQKKQQ--------------RQNFVFSATLTLVHDLPDHMQ 469
Query: 417 HGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
++ +KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 470 KRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSTQQTAQTLTES 518
>gi|428175672|gb|EKX44561.1| hypothetical protein GUITHDRAFT_109675 [Guillardia theta CCMP2712]
Length = 748
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 181/314 (57%), Gaps = 30/314 (9%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E++ WN + L L+K++ GF++PT IQ+ IPAA + + DI GAAETGSGKTLAF
Sbjct: 186 EYEEWNCVMLRKCLVKALKEQGFEQPTAIQELVIPAAMAK-RQDIFGAAETGSGKTLAFA 244
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
LP++QR+L+ +G +E+ L L+++PTRELA+QV DH+ A+
Sbjct: 245 LPMLQRILDSHNFSGIDAKER-----------KLAGLVLSPTRELAIQVRDHIVAAARFT 293
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
++VV +VGG+S +KQ+R L P +VVGTPGRLWE M G ++L EL+ L V+DEAD
Sbjct: 294 KIKVVAVVGGLSMQKQQRQLAMHPHIVVGTPGRLWEQMRLGNEYLRELNMLLCLVIDEAD 353
Query: 351 RMIENGHFRELQSIIDMLPMTN--GSNEGQSEQTQTCVTVSSLQRKK-----------RQ 397
RM+E GHF+EL++I+++LP + + +S + + ++S Q K RQ
Sbjct: 354 RMMETGHFQELENILNLLPDLDPKAKQKRESNEEEEEEEITSFQATKGSKLHAQRHYRRQ 413
Query: 398 TLVFSATIALSADFRKKLKHGSLKLKQSVNG-----LNSIETLSERAGMRANVAIVDLTN 452
T++FSAT+ +R K + ++ SIE L +R + I DLT
Sbjct: 414 TMIFSATLIKDIQWRSTKKVKRKEKRKQPETSADVRRQSIERLIDRLQLPEEPVIFDLTP 473
Query: 453 VSVLANKLEESFIE 466
++ K+ + +E
Sbjct: 474 SGKVSEKIAQYRVE 487
>gi|56201305|dbj|BAD72907.1| unnamed protein product [Drosophila simulans]
gi|56201324|dbj|BAD72925.1| unnamed protein product [Drosophila sechellia]
Length = 814
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 212/419 (50%), Gaps = 95/419 (22%)
Query: 117 VQKEQEKNLKNQKGKKKKKKKKGKKIKTVEES---------VTVSNGPDDAEEELVSEAE 167
+QK +EK K +K +K+KK KGK+ EES + P D E E V++AE
Sbjct: 130 MQKLREKREK-RKELRKQKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEAEEVAKAE 188
Query: 168 ISTE----------------------FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
S + AWN L + +++++ GFK PT IQ +P
Sbjct: 189 DSADQQESSDEEAPELVSIPTDEAEDVSAWNGLGVPASILRALGEQGFKTPTQIQALTLP 248
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK------------AGKMLEEKGE 253
AA H GK DI+GAAETGSGKTLAFG+P++ ++E +++ G+ E +
Sbjct: 249 AAIH-GKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAAD 307
Query: 254 EAEKYAP------------------------KGHLRALIITPTRELALQVTDHLKEVAKG 289
E E P + L L++TPTRELA+QV +HL AK
Sbjct: 308 EHELTPPPEELDHVSGASDEESDAEEHTQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKY 367
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
+RV I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++ +SF V+DE
Sbjct: 368 TGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDET 427
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 409
DRM+E GHF EL+S++ +L S+E + Q RQ V+SAT+ L
Sbjct: 428 DRMVEKGHFEELRSLLKVL----NSDEQKKHQ--------------RQNFVYSATLTLVH 469
Query: 410 DFRKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
D ++ ++ +KQSV+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 470 DLPDHMQKRNVGKRPKFVKQSVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 525
>gi|242022824|ref|XP_002431838.1| ATP-dependent RNA helicase MAK5, putative [Pediculus humanus
corporis]
gi|212517170|gb|EEB19100.1| ATP-dependent RNA helicase MAK5, putative [Pediculus humanus
corporis]
Length = 543
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 167/290 (57%), Gaps = 28/290 (9%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACI-PAAAHQGKVDIIGAAETGSGKTLAFGLP 232
+WN +H ++ ++Y + EPT IQ C+ PA G++DI+GAAETGSGKTLAFG+P
Sbjct: 3 SWNSFGIHEKILYALYDKKYFEPTKIQSRCLGPAIC--GQMDILGAAETGSGKTLAFGIP 60
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
I+ +L EK L + E + K +L ALI+TPTRELA+QV +HL ++ K +
Sbjct: 61 IVNGILSIMEKE---LNQSIESLKMKNEKNNLYALILTPTRELAVQVRNHLNDICKYTKI 117
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
+ IVGG++ EKQER+L RPE++V TPGRLWEL++ HL + L + +DE DRM
Sbjct: 118 NIALIVGGLAHEKQERILNKRPEIIVATPGRLWELVNDNNIHLSNIKNLRYLAIDETDRM 177
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 412
+E GHF EL +++ + + NE ++KKRQ +FSAT+ + D
Sbjct: 178 LEKGHFTELNDLLERINL----NEN--------------KKKKRQNFLFSATLTVVHDPP 219
Query: 413 KKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEE 462
LK K + + ++ L + G+ N IVD+TN V A L E
Sbjct: 220 SYLKG---KKNKRITPGQKLQDLISKIGI-TNPKIVDITNTHVTAENLSE 265
>gi|20130173|ref|NP_611467.1| CG9143 [Drosophila melanogaster]
gi|7302399|gb|AAF57487.1| CG9143 [Drosophila melanogaster]
gi|33636633|gb|AAQ23614.1| LD11580p [Drosophila melanogaster]
Length = 813
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 213/418 (50%), Gaps = 94/418 (22%)
Query: 117 VQKEQEKNLKNQKGKKKKKKKKGKKIKTVEES---------VTVSNGPDDAEEELVSEAE 167
+QK +EK K +K +K+KK KGK+ EES + P D EEE+V +
Sbjct: 130 MQKLREKREK-RKELRKQKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEEEVVKAED 188
Query: 168 -----------------IST----EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA 206
IST + AWN L + +++++ GFK PT IQ +PA
Sbjct: 189 SADQQESTDEEAPELVPISTGEAEDMSAWNGLGVPASILRALGEQGFKTPTQIQALTLPA 248
Query: 207 AAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK------------AGKMLEEKGEE 254
A H GK DI+GAAETGSGKTLAFG+P++ ++E +++ G+ E +E
Sbjct: 249 AIH-GKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADE 307
Query: 255 AEKYAP------------------------KGHLRALIITPTRELALQVTDHLKEVAKGI 290
E P + L L++TPTRELA+QV +HL AK
Sbjct: 308 HELTPPPEELDHVSGASDEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYT 367
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+RV I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++ +SF V+DE D
Sbjct: 368 GIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETD 427
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
RM+E GHF EL+S++ +L S+E + Q RQ V+SAT+ L D
Sbjct: 428 RMVEKGHFEELRSLLKVL----NSDEQKKHQ--------------RQNFVYSATLTLVHD 469
Query: 411 FRKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
++ ++ +KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 470 LPDHMQKRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 524
>gi|196008359|ref|XP_002114045.1| hypothetical protein TRIADDRAFT_58110 [Trichoplax adhaerens]
gi|190583064|gb|EDV23135.1| hypothetical protein TRIADDRAFT_58110 [Trichoplax adhaerens]
Length = 685
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 184/356 (51%), Gaps = 84/356 (23%)
Query: 113 DGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEF 172
DG G E KN+ KK KK K VEE TV N DD ++ +
Sbjct: 41 DGTGKVSEVTNRSKNKSVKKTPKKDANK----VEEESTVENPHDDGKDNV--------NM 88
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
AW+ L++ ++K++ + F PTPIQ + AA K DIIGAAETGSGKTLA+G+P
Sbjct: 89 KAWDSLQVPEPVLKALSDMNFLTPTPIQSLSLVAAIRDRK-DIIGAAETGSGKTLAYGIP 147
Query: 233 IMQRLLEEREKAGKMLEEKGEEAE------KYAP---KGH-------------------- 263
I+QR+L+ + K + K ++A K P + H
Sbjct: 148 IIQRILQLKADGKKSSKRKWDKANNKTEVIKETPSKKRKHEKGAKPTSSTSDQKSSNKTT 207
Query: 264 -------------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL 310
+ AL++TPTRELALQV DHL+ AK ++++ IVGG+S KQ+RLL
Sbjct: 208 VDNMDNSEVAESPVYALVLTPTRELALQVRDHLRSAAKYTDLKIEAIVGGISQHKQQRLL 267
Query: 311 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
+PE+++ TPGR+W+L+S GE HL ++ L VLDE DRMIE GH+ EL I++ LP
Sbjct: 268 NYQPEIIIATPGRMWQLLSEGESHLQTINKLPLLVLDEVDRMIEYGHYAELSDILERLP- 326
Query: 371 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSV 426
+R RQTLV+SAT+ ++ K+ +++K+SV
Sbjct: 327 ---------------------ERPLRQTLVYSATLTIN-------KNKKVEMKKSV 354
>gi|303278168|ref|XP_003058377.1| helicase [Micromonas pusilla CCMP1545]
gi|226459537|gb|EEH56832.1| helicase [Micromonas pusilla CCMP1545]
Length = 1131
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 146/238 (61%), Gaps = 38/238 (15%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
+ AW + LH L++++ LGF PTPIQ C+ A +G+ D+IGAAETGSGKTLAF
Sbjct: 329 ADVSAWLQFDLHSKLLRALQELGFTTPTPIQSECLNPAV-KGRCDVIGAAETGSGKTLAF 387
Query: 230 GLPIMQRLLEEREKAGK-------------------------------MLEEKGEEAEKY 258
GLPI+ RLL +R++ + + +E+G
Sbjct: 388 GLPILHRLLTQRDEEAEEGSDSESVDGDGDGGGDGDGDDADPDDPFANIEDERGRRGSAA 447
Query: 259 APK-----GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKAR 313
K LRALI+ PTRELA+QV + LK+VAK V VVP+VGGMS +KQERLLK R
Sbjct: 448 GMKLDRRRKALRALIVAPTRELAMQVCEMLKQVAKYSGVDVVPVVGGMSLQKQERLLKRR 507
Query: 314 PELVVGTPGRLWELM-SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
PE+VV TPGRLWELM G +H V+L LSF VLDEADRM+E GHF EL +IID LPM
Sbjct: 508 PEIVVATPGRLWELMHQHGHEHFVDLGRLSFLVLDEADRMVERGHFAELANIIDTLPM 565
>gi|384498821|gb|EIE89312.1| hypothetical protein RO3G_14023 [Rhizopus delemar RA 99-880]
Length = 808
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 178/314 (56%), Gaps = 27/314 (8%)
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
P+ + + + + S + AW + L ++ ++ F PTPIQ+ +P A QG+ D
Sbjct: 233 PEPKKRPTIDDVDQSVDVSAWKDFELAQPIVNALKYHKFSSPTPIQEKTLPLAL-QGR-D 290
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
I+G+AETGSGKTLAFG+PI+Q L K L LI+TPTRE
Sbjct: 291 IVGSAETGSGKTLAFGIPIVQYLATHE-------------------KEDLSGLILTPTRE 331
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA+QV DH+ VA ++R V IVGGMS +KQERLLK +P+++V TPGRLWEL SG +++
Sbjct: 332 LAIQVKDHIANVALFTDIRCVAIVGGMSAQKQERLLKGKPDIIVATPGRLWELFSGNQEY 391
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT-QTCVTVSSLQR 393
+ L + F VLDEADRM+E GHF EL +I++ L + E+ Q +
Sbjct: 392 MDMLKRIKFLVLDEADRMLEKGHFEELTNILNTLSTKRQTTTDWPEEIGQGNRKILPQDL 451
Query: 394 KKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRAN-VAIVDLTN 452
QT +++AT LS D R +K + K K + +++ L R A++D+T+
Sbjct: 452 GVHQTFIYTAT--LSKDIRFNVK--AKKRKATAQPTGTMDDLLSRIEFADQEPALIDMTS 507
Query: 453 VSVLANKLEESFIE 466
+++A++L E+ I+
Sbjct: 508 ENIVASRLLEAKID 521
>gi|195336062|ref|XP_002034666.1| GM19796 [Drosophila sechellia]
gi|194126636|gb|EDW48679.1| GM19796 [Drosophila sechellia]
Length = 814
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 212/419 (50%), Gaps = 95/419 (22%)
Query: 117 VQKEQEKNLKNQKGKKKKKKKKGKKIKTVEES---------VTVSNGPDDAEEELVSEAE 167
+QK +EK K +K +K+KK KGK+ EES + P D E E V++AE
Sbjct: 130 MQKLREKREK-RKELRKQKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEAEEVAKAE 188
Query: 168 ISTE----------------------FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
S + AWN L + +++++ GFK PT IQ +P
Sbjct: 189 DSADQQESSDEEAPELVSIPTDEAEDVSAWNGLGVPASILRALGEQGFKTPTQIQALTLP 248
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK------------AGKMLEEKGE 253
AA H GK DI+GAAETGSGKTLAFG+P++ ++E +++ G+ E +
Sbjct: 249 AAIH-GKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAAD 307
Query: 254 EAEKYAP------------------------KGHLRALIITPTRELALQVTDHLKEVAKG 289
E E P + L L++TPTRELA+QV +HL AK
Sbjct: 308 EHELTPPPEELDHVSGASDEESDAEEHTQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKY 367
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
+RV I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++ +SF V+DE
Sbjct: 368 TGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDET 427
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 409
DRM+E GHF EL+S++ +L S+E + Q RQ V+SAT+ L
Sbjct: 428 DRMVEKGHFEELRSLLKVL----NSDEQKKHQ--------------RQNFVYSATLTLVH 469
Query: 410 DFRKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
D ++ ++ +KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 470 DLPDHMQKRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 525
>gi|270010898|gb|EFA07346.1| hypothetical protein TcasGA2_TC015943 [Tribolium castaneum]
Length = 599
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 163/280 (58%), Gaps = 31/280 (11%)
Query: 134 KKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGF 193
K KK +K+ +V + + + E+ + + S + W+ L ++K++ GF
Sbjct: 60 KPAKKKRKVSSVALTPSKQGSSVETRVEINEKIQKSDSYLVWSNFGLPDSIIKALVLQGF 119
Query: 194 KEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGE 253
EPT IQ +PAA G+ DI+GAAETGSGKTLAFGLPI+ +L E+ K ++K
Sbjct: 120 NEPTLIQSLSLPAAV-LGRRDIVGAAETGSGKTLAFGLPIVAGILNEKSKVVGNSDKK-- 176
Query: 254 EAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKAR 313
L AL++TPTRELA+QV DHLK + K ++ + ++GGM+ KQER+L R
Sbjct: 177 ----------LYALVLTPTRELAVQVRDHLKAIVKFTDINIAVVLGGMAAVKQERILSKR 226
Query: 314 PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 373
PE+VV TPGRLWEL+ G +HL +++ + + +DE DRM+E GHF EL +I++ L +
Sbjct: 227 PEIVVATPGRLWELIQQGNEHLSQINDIRYLAIDETDRMLEKGHFEELHNILERLNL--- 283
Query: 374 SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 413
++T+ K+RQ VFSAT+ L D K
Sbjct: 284 ------DKTRA---------KQRQNFVFSATLTLVHDLPK 308
>gi|195486926|ref|XP_002091709.1| GE13811 [Drosophila yakuba]
gi|194177810|gb|EDW91421.1| GE13811 [Drosophila yakuba]
Length = 808
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 188/353 (53%), Gaps = 67/353 (18%)
Query: 156 DDAEEELVSEAEIST----EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
D ++EE IST + AWN L + +++++ GFK PT IQ +PAA H G
Sbjct: 189 DSSDEEAPELVPISTSEAEDVSAWNGLGVPASILRALGEQGFKAPTQIQALTLPAAIH-G 247
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREK------------AGKMLEEKGEEAEKYA 259
K DI+GAAETGSGKTLAFG+P++ ++E +++ G+ E +E E
Sbjct: 248 KKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTP 307
Query: 260 P------------------------KGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 295
P + L L++TPTRELA+QV +HL AK +RV
Sbjct: 308 PPEELDHVSGASDEESDAEEQAQRIQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVA 367
Query: 296 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 355
I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++ +SF V+DE DRM+E
Sbjct: 368 AIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEK 427
Query: 356 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 415
GHF EL+S++ +L S+E + Q RQ V+SAT+ L D +
Sbjct: 428 GHFEELRSLLKVL----NSDEQKKHQ--------------RQNFVYSATLTLVHDLPDHM 469
Query: 416 KHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
+ ++ +KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 470 QKRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 519
>gi|189239044|ref|XP_969373.2| PREDICTED: similar to CG9143 CG9143-PA [Tribolium castaneum]
Length = 645
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 160/280 (57%), Gaps = 31/280 (11%)
Query: 134 KKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGF 193
K KK +K+ +V + + + E+ + + S + W+ L ++K++ GF
Sbjct: 62 KPAKKKRKVSSVALTPSKQGSSVETRVEINEKIQKSDSYLVWSNFGLPDSIIKALVLQGF 121
Query: 194 KEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGE 253
EPT IQ +PAA G+ DI+GAAETGSGKTLAFGLPI+ +L E+ K ++K
Sbjct: 122 NEPTLIQSLSLPAAV-LGRRDIVGAAETGSGKTLAFGLPIVAGILNEKSKVVGNSDKK-- 178
Query: 254 EAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKAR 313
L AL++TPTRELA+QV DHLK + K ++ + ++GGM+ KQER+L R
Sbjct: 179 ----------LYALVLTPTRELAVQVRDHLKAIVKFTDINIAVVLGGMAAVKQERILSKR 228
Query: 314 PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 373
PE+VV TPGRLWEL+ G +HL +++ + + +DE DRM+E GHF EL +I++ L
Sbjct: 229 PEIVVATPGRLWELIQQGNEHLSQINDIRYLAIDETDRMLEKGHFEELHNILERL----- 283
Query: 374 SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 413
+ + K+RQ VFSAT+ L D K
Sbjct: 284 -------------NLDKTRAKQRQNFVFSATLTLVHDLPK 310
>gi|194881539|ref|XP_001974888.1| GG20872 [Drosophila erecta]
gi|190658075|gb|EDV55288.1| GG20872 [Drosophila erecta]
Length = 815
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 193/367 (52%), Gaps = 70/367 (19%)
Query: 142 IKTVEESVTVSNGPDDAEEELVSEAEIST----EFDAWNELRLHPLLMKSIYRLGFKEPT 197
+ E+S + D+ ELV IST + AWN L + +++++ GFK PT
Sbjct: 185 VAKAEDSADQQDSSDEEAPELVP---ISTGEGEDVSAWNGLGVPASILRALGEQGFKAPT 241
Query: 198 PIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK------------AG 245
IQ +PAA H GK DI+GAAETGSGKTLAFG+P++ ++E +++ G
Sbjct: 242 QIQALTLPAAIH-GKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKG 300
Query: 246 KMLEEKGEEAEKYAP------------------------KGHLRALIITPTRELALQVTD 281
+ E +E E P + L L++TPTRELA+QV +
Sbjct: 301 QQPEPAADEHELTPPPEELDHVSGASDEESDAEEHAQRMQTPLYGLVLTPTRELAVQVKN 360
Query: 282 HLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 341
HL AK +RV I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++ +
Sbjct: 361 HLVAAAKYTGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDV 420
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 401
SF V+DE DRM+E GHF EL+S++ +L S+E + Q RQ V+
Sbjct: 421 SFLVIDETDRMVEKGHFEELRSLLKVL----NSDEQKKHQ--------------RQNFVY 462
Query: 402 SATIALSADFRKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVL 456
SAT+ L D ++ ++ +KQ+V+ IE+L E G+ + IVD+T+
Sbjct: 463 SATLTLVHDLPDHMQKRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQT 519
Query: 457 ANKLEES 463
A L ES
Sbjct: 520 AQTLTES 526
>gi|326432948|gb|EGD78518.1| hypothetical protein PTSG_12845 [Salpingoeca sp. ATCC 50818]
Length = 984
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 133/207 (64%), Gaps = 10/207 (4%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
+ AW LH +M+ + F +PTP+Q+ C+ A QG DI+ AETGSGKTLAF
Sbjct: 287 VDMSAWLPFGLHSSIMEGLQAQRFTKPTPVQEECLQPAI-QGFRDIVACAETGSGKTLAF 345
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 289
GLP++Q ++ R++ + L+AL++ PTRELA+QV DHL +AK
Sbjct: 346 GLPVIQHIINLRQQG---------DDGDDDALTRLKALVVCPTRELAIQVRDHLVAIAKH 396
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
+RVV IVGG+S +KQ RLL RPE++VGTPGRLW+L++ G +L L F V+DEA
Sbjct: 397 CGIRVVAIVGGISVQKQRRLLAGRPEIIVGTPGRLWDLIAAGNDAFHDLRRLRFLVIDEA 456
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNE 376
DRM+E GHF+EL++I+ LPM +++
Sbjct: 457 DRMVEQGHFKELENILRKLPMAERTDD 483
>gi|167538304|ref|XP_001750817.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770734|gb|EDQ84416.1| predicted protein [Monosiga brevicollis MX1]
Length = 1041
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 131/216 (60%), Gaps = 20/216 (9%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGA 218
E+ S+ + AW L+L L +++ R GF PTPIQ+A I A + D+I A
Sbjct: 277 EDVTTSQPLADEDLAAWTVLQLDRELAEAVVRRGFTAPTPIQQAAIVPAVRDYR-DVIAA 335
Query: 219 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQ 278
A TGSGKTLAFGLP++Q +L R + L+ LI+TPTRELALQ
Sbjct: 336 APTGSGKTLAFGLPVLQHILNRRARGRST--------------AGLQCLILTPTRELALQ 381
Query: 279 -----VTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
+ HLK +A ++VRV IVGGM+ KQERLLKA+PE+VVGTPGRLWE++ G
Sbjct: 382 QSLWQIQQHLKPLATPLSVRVTAIVGGMALVKQERLLKAKPEIVVGTPGRLWEIIQSGHV 441
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
H L +L F VLDEADRM+E GHF EL I+ LP
Sbjct: 442 HFAHLDSLRFLVLDEADRMVERGHFAELDKILARLP 477
>gi|195123017|ref|XP_002006006.1| GI18782 [Drosophila mojavensis]
gi|193911074|gb|EDW09941.1| GI18782 [Drosophila mojavensis]
Length = 819
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 178/335 (53%), Gaps = 68/335 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+ + + +M+++ LG++ PT IQ +PAA H GK DI+GAAETGSGKTLAFG+PI+
Sbjct: 213 WHGMGVPEPIMRALAELGYEAPTQIQAMTLPAAIH-GKKDILGAAETGSGKTLAFGIPIL 271
Query: 235 QRLLEEREK-----------------------------------------AGKMLEEKGE 253
++E +++ +G EE
Sbjct: 272 SGIMELKQRNDDSGIRKAPKVKGAQGPVEEAPPTKDNHELTPSPEELDYVSGASDEESDN 331
Query: 254 EAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKAR 313
E + A + L A+++TPTRELA+QV +HL AK + V I GG+S KQER+L+
Sbjct: 332 EHDPEAKQRPLYAVVLTPTRELAVQVKNHLVSAAKYTGINVAAIFGGLSVAKQERVLRQC 391
Query: 314 PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 373
PE+VV TPGRLWEL + G HL ++ +SF +DE DRM+E GHF EL+S++ +L N
Sbjct: 392 PEIVVATPGRLWELYAQGNSHLSKIENVSFLCIDETDRMVEKGHFEELRSLLKVL---NA 448
Query: 374 SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK-----LKQSVNG 428
E ++K RQ VFSAT+ L D + ++ +L +KQ+V+
Sbjct: 449 DEE---------------RKKLRQNFVFSATLTLVHDLPEHMQKRNLAKRPKFIKQTVD- 492
Query: 429 LNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
IE+L E G+ + IVD+T+ A L ES
Sbjct: 493 -QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 525
>gi|195429401|ref|XP_002062751.1| GK19535 [Drosophila willistoni]
gi|194158836|gb|EDW73737.1| GK19535 [Drosophila willistoni]
Length = 823
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 199/374 (53%), Gaps = 73/374 (19%)
Query: 141 KIKTVEESVTVSNGPDDAEEELVS---EAEISTE-FDAWNELRLHPLLMKSIYRLGFKEP 196
+ + ++S+ ++ +LVS E STE +W+ L + +++++ GF+EP
Sbjct: 182 RFSLIRPPASISSDEEEEAPQLVSASTEGFTSTEDLSSWHGLGVPQPILRALAEKGFREP 241
Query: 197 TPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGK-----MLEEK 251
T IQ +PAA H GK DI+GAAETGSGKTLAFG+P++ +++ +E+ K + K
Sbjct: 242 TQIQAMTLPAAIH-GKKDILGAAETGSGKTLAFGIPMLAGIMDLKERNAKHGIRKAPKVK 300
Query: 252 GEEAEKY--APKGH-----------------------------------LRALIITPTRE 274
GE+++K P+ L AL++TPTRE
Sbjct: 301 GEDSQKSEEPPRDDEHELTPPPEELDHVSGASDEDDSDLENHSASRERPLYALVLTPTRE 360
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA+QV +HL AK +RV I GG++ KQER+L+ PE+VV TPGRLWEL G H
Sbjct: 361 LAVQVKNHLVAAAKYTGIRVATIFGGLAVAKQERVLRQGPEIVVATPGRLWELYCQGNHH 420
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 394
L +++ +SF V+DE DRM+E GHF EL+S++ +L NG + +++
Sbjct: 421 LSKINDVSFLVIDETDRMVEKGHFEELRSLLKVL---NGDEQ---------------KKQ 462
Query: 395 KRQTLVFSATIALSADFRKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVD 449
RQ VFSAT+ L D ++ ++ +KQ+V+ IE+L E G+ IVD
Sbjct: 463 LRQNFVFSATLTLVHDLPDHMQKRNVGKKPKFVKQTVD--QKIESLIEELGI-MQPKIVD 519
Query: 450 LTNVSVLANKLEES 463
+T+ A L ES
Sbjct: 520 ITSSQQTAQNLTES 533
>gi|194753466|ref|XP_001959033.1| GF12675 [Drosophila ananassae]
gi|190620331|gb|EDV35855.1| GF12675 [Drosophila ananassae]
Length = 813
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/357 (36%), Positives = 194/357 (54%), Gaps = 70/357 (19%)
Query: 155 PDDAEEELVSE-AEIS----TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
P+D+++E+V E IS + AWN L + +++++ GF PT IQ +PAA H
Sbjct: 190 PEDSDDEIVPELVSISNGNGVDVSAWNGLGVPAPILRALGEQGFSAPTQIQALTLPAAIH 249
Query: 210 QGKVDIIGAAETGSGKTLAFGLPIMQRLLEERE---KAG--KMLEEKGEE-AEKYAPKGH 263
GK DI+GAAETGSGKTLAFG+P++ ++E ++ K+G K + KGE+ A + A H
Sbjct: 250 -GKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNVKSGIRKAPKTKGEKPAAEPADDEH 308
Query: 264 --------------------------------LRALIITPTRELALQVTDHLKEVAKGIN 291
L L++TPTRELA+QV +HL AK
Sbjct: 309 ELTPPPEELDHVSGASDEESDVEEHNQRMQRPLYGLVLTPTRELAVQVKNHLVAAAKYTG 368
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
++V I GG++ KQER+L+ PE+VV TPGRLWEL G +HL ++ SF V+DE DR
Sbjct: 369 IKVAAIFGGLAVAKQERVLRQCPEIVVATPGRLWELYCQGNQHLSKIEDASFLVIDETDR 428
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 411
M+E GHF EL+S++ +L S+E + +Q RQ V+SAT+ L D
Sbjct: 429 MVEKGHFEELRSLLKVL----NSDEQKKQQ--------------RQNFVYSATLTLVHDL 470
Query: 412 RKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
++ ++ +KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 471 PDHMQKRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 524
>gi|449303441|gb|EMC99448.1| hypothetical protein BAUCODRAFT_29794 [Baudoinia compniacensis UAMH
10762]
Length = 718
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 180/349 (51%), Gaps = 37/349 (10%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQ 121
GF LEE+D+ + P GK N RK S + GD DED +
Sbjct: 32 GFFGLEEVDDVEV---VRDPSSGKLSYVPN-DVRKSSVQDARSNGD---DEDAWEGWDDT 84
Query: 122 EKNLKNQKGKKKKKKKKGKKIKTVEES-VTVSNGPDDAEEELVSEAEISTEFDAWNELRL 180
+L N + K K+ K E S + PD E ++ + AW L+L
Sbjct: 85 PHHLGNGRKTASKATPSAKRFKPNETSTAALQVLPDVLENSMI-------DVSAWRPLKL 137
Query: 181 HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEE 240
P + S+ RLGF PTPIQ+A IP A G D++G A TGSGKTLAFG+PI++R LE
Sbjct: 138 SPDTLASLARLGFSNPTPIQRAAIPEAL--GGHDVVGKASTGSGKTLAFGIPILERFLEL 195
Query: 241 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV---RVVPI 297
R K + KG H AL+++PTRELA Q+ HL+ + + +
Sbjct: 196 RSKRNNV-PSKGR---------HPLALLLSPTRELAHQLDKHLRALCSSDYFDGPSIATV 245
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
GG+S KQ+RLLK ++V+GTPGRLWE+MS G+ L L + F ++DEADR++ GH
Sbjct: 246 TGGLSILKQQRLLKT-ADIVIGTPGRLWEVMSSGQGTLDALSRIQFLIVDEADRLLSEGH 304
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS-LQRKKRQTLVFSATI 405
++E++ I+D L + SE + V + R RQTLVFSAT
Sbjct: 305 YKEVEEILDALYRRH-----DSEDDEAAVQADAGDSRPARQTLVFSATF 348
>gi|320165920|gb|EFW42819.1| ATP-dependent RNA helicase DDX24 [Capsaspora owczarzaki ATCC 30864]
Length = 1137
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 131/211 (62%), Gaps = 9/211 (4%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
T+ WN LH LL+K + G+ PTPIQ+ + + DIIGA+ETGSGKTLAF
Sbjct: 429 TDMSEWNGFGLHELLIKGLATAGYARPTPIQREALLKGLRDYQ-DIIGASETGSGKTLAF 487
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAE--------KYAPKGHLRALIITPTRELALQVTD 281
LPI+Q +L R+K + G++ E K L ALI+TPTRELA Q+ +
Sbjct: 488 ALPILQVILNGRDKEAARESQNGDDNEAETDAASKKVFKNRPLSALILTPTRELASQIRE 547
Query: 282 HLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 341
+ +VAK ++ VV ++GG+S EKQ R+L P++VV TPGRLW+ MS G +HL EL L
Sbjct: 548 QIVKVAKFTDISVVTVIGGLSAEKQRRVLSYCPDIVVATPGRLWDYMSQGNQHLTELRYL 607
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTN 372
VLDEADRM+ GHF EL I+ +LP+ N
Sbjct: 608 RHLVLDEADRMVATGHFEELTKILAILPVQN 638
>gi|119193909|ref|XP_001247558.1| hypothetical protein CIMG_01329 [Coccidioides immitis RS]
gi|118574275|sp|Q1E7Y4.1|MAK5_COCIM RecName: Full=ATP-dependent RNA helicase MAK5
gi|392863201|gb|EAS36075.2| ATP-dependent RNA helicase MAK5 [Coccidioides immitis RS]
Length = 783
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 158/504 (31%), Positives = 245/504 (48%), Gaps = 83/504 (16%)
Query: 20 RRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GFLSL 66
+R K A+ + K+N++ + + +D +V ++LD GF L
Sbjct: 4 KRSHNHKDHTAKAIKRRKFNAATAKSSDDAAHDIVSVDQLDWKTVTLPDRLDDAEGFYGL 63
Query: 67 EEIDEASYNLQIPKPEKGKPGK------------KTNTKKRKRSSAN-EEDPGDGDGDED 113
EEI+ + I +P G K K +T K + + + EE G GD ED
Sbjct: 64 EEIE----GVDILRPSGGGEIKFKASKSKIKGILKNSTDKSGQPAEDWEEWSGFGDDSED 119
Query: 114 GNGVQKEQEKNLKN----------------QKGKKKKKKKKGKKIKT---VEESVTVSNG 154
G+G E EK +N +K K K +G +IKT ++ V+ +
Sbjct: 120 GDGTTLEAEKKAENHGKVNDRRTKTNNSNKEKESNKLPKDRGPRIKTDNGIKTGVSFAAL 179
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
D+ EE++ + AW+ L L L S+ RL F PTPIQ ACIPA QG D
Sbjct: 180 QDEVEEDV--------DVSAWDSLDLSAELQTSLGRLKFSSPTPIQSACIPAVL-QGH-D 229
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
+IG A TGSGKTLAFG+PI++ L + + G+ E P ALI++PTRE
Sbjct: 230 VIGKASTGSGKTLAFGIPIVEYFLG-KYRGGRAPTASEERESTKEP----MALILSPTRE 284
Query: 275 LALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
LA Q+ HL ++ A VR+ + GG+S KQ+RLL A ++++ TPGRLWE++
Sbjct: 285 LAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLL-ADADIIIATPGRLWEVVGSM 343
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 391
L +L + F V+DEADR++ GHF+E++ I++ + + E E+++
Sbjct: 344 TGFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGERSEREPEPEPD 403
Query: 392 QRKK---RQTLVFSATIALSADFRKKLKH---GSLKLKQS--VNGLNSIETLSERAGMR- 442
+ KK RQTLVFSAT F K L+ G ++ + ++ S+E L + R
Sbjct: 404 EEKKAEPRQTLVFSAT------FHKGLQQKLSGKIRYRNDDLLDKKESMEYLLRKLNFRE 457
Query: 443 ANVAIVDLTNVSVLANKLEESFIE 466
+D+ +S +A L+E ++
Sbjct: 458 ERPKFIDVNPISQMAQNLKEGLVQ 481
>gi|452989521|gb|EME89276.1| hypothetical protein MYCFIDRAFT_185631 [Pseudocercospora fijiensis
CIRAD86]
Length = 723
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 226/463 (48%), Gaps = 61/463 (13%)
Query: 15 ETKPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASY 74
+ +PN++ R K+ +SL W + D + GF LEEID+
Sbjct: 12 DARPNKKPRIVKA------DSLPWKAVSLPDRMDDYE----------GFFGLEEIDDVDV 55
Query: 75 NLQIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKK 134
++ + K + ++ +A D D D D ++ + QK K+
Sbjct: 56 -------KRDEATGKVSLWSKEDQTALTADHASADSDADSWSGFEDDGPEIPVQKSAKQN 108
Query: 135 KKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFK 194
+ K K K + N P +E T+ AW L+L P M S+ +L F
Sbjct: 109 QPSKVKTAKKQDIHEGDDNPPSAFSVLAANEDAADTDVSAWMPLKLSPDTMASLSKLKFS 168
Query: 195 EPTPIQKACIPA--AAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE---EREKAGKMLE 249
PTPIQ+A IP A H D+IG A TGSGKTLAFG+PI++R LE EREK
Sbjct: 169 NPTPIQEAAIPKIFAGH----DVIGKASTGSGKTLAFGIPILERFLEKISEREKL----- 219
Query: 250 EKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR---VVPIVGGMSTEKQ 306
E+ P ALI++PTRELA Q+ HL + G++ + + + GG+S +KQ
Sbjct: 220 ------EQSTPI----ALILSPTRELAHQLNSHLAALFDGLDAKKPTIATLTGGLSLQKQ 269
Query: 307 ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+RLL+ ++V+GTPGRLWE++ G+ L + F V+DEADR++ GHF+E++ I++
Sbjct: 270 QRLLR-DADVVIGTPGRLWEVIGSGKGVAAALKQIEFLVVDEADRLLSEGHFKEVEEILN 328
Query: 367 MLPMTNGSNEGQSEQTQTCVTVSSLQR--KKRQTLVFSATIALSADFRKKLKHGSLKLKQ 424
L E Q E+ Q S + K+RQTLVFSAT +KKL +
Sbjct: 329 AL-----DREDQDEEHQEVPDSSHAVKSPKERQTLVFSAT--FDRGLQKKLVGKISSKRD 381
Query: 425 SVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 466
++ ++E L + R ++ +D+ V+ LA L+E IE
Sbjct: 382 LLHNKEAMEYLMSKLNFREDIPQFIDVNPVNQLATGLKEGLIE 424
>gi|348686576|gb|EGZ26391.1| hypothetical protein PHYSODRAFT_480097 [Phytophthora sojae]
Length = 793
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 156/263 (59%), Gaps = 33/263 (12%)
Query: 114 GNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFD 173
G+ ++Q+K KKKK + GK K EE+V V D +
Sbjct: 88 GDSKTRQQKKQEDASNAPKKKKTRGGKAKK--EEAVEVVPLKD-------------VKLP 132
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQ-KACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
WN+ +LHPLLM+S+ GF PT IQ + +PA D++GAA TGSGKTLAFGLP
Sbjct: 133 KWNKFKLHPLLMQSLQTCGFSAPTRIQERTLLPALVDNR--DVVGAAPTGSGKTLAFGLP 190
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
I+ +LL ERE+ G + K ALI+TPTRELA+Q+ HL+++ + +
Sbjct: 191 ILSQLLHEREQPGYTKDCK--------------ALILTPTRELAIQIQQHLEKMVRNREI 236
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH-TLSFFVLDEADR 351
VV +VGGM+ +KQ+R+L RPE+V+GTPGRLW+++ +H+ +L TL F V+DEADR
Sbjct: 237 GVVTLVGGMAVQKQKRILSYRPEIVIGTPGRLWDIIEANHEHMKDLATTLRFLVVDEADR 296
Query: 352 MIENGHFRELQSIIDMLPMTNGS 374
M++ G + EL+ I D+L N S
Sbjct: 297 MLQPGSYPELEKIFDVLRRKNKS 319
>gi|195382239|ref|XP_002049838.1| GJ21808 [Drosophila virilis]
gi|194144635|gb|EDW61031.1| GJ21808 [Drosophila virilis]
Length = 819
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 186/359 (51%), Gaps = 69/359 (19%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
S+G ++ + + S + + WN + + +M+++ G++ PT IQ +PAA H G
Sbjct: 189 SSGDEEVPQLVPSTPQDEKDMTKWNGMGVPAPIMRALAEQGYEAPTQIQAMTLPAAIH-G 247
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREK---------------------------- 243
K DI+GAAETGSGKTLAFG+PI+ ++E +++
Sbjct: 248 KKDILGAAETGSGKTLAFGIPILSGIMELKQRNDGSCIRKAPKVKGTQQVEEPPQSKDNH 307
Query: 244 --------------AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 289
+G EE E L A+++TPTRELA+QV +HL AK
Sbjct: 308 NHELTPPPEELDYVSGASDEESDAEEHNQGMGRPLYAVVLTPTRELAVQVKNHLVAAAKY 367
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
+RV I GG+S KQER+L+ PE+VV TPGRLWEL + G +HL ++ ++F +DE
Sbjct: 368 TGIRVAAIFGGLSVAKQERVLRQCPEIVVATPGRLWELYAQGNQHLNKIENVNFLCIDET 427
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 409
DRM+E GHF EL+S++ +L N + ++K RQ VFSAT+ L
Sbjct: 428 DRMVEKGHFEELRSLLKVL---NADED---------------RKKLRQNFVFSATLTLVH 469
Query: 410 DFRKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
D + ++ +L +KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 470 DLPEHMQKRNLAKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 525
>gi|260829397|ref|XP_002609648.1| hypothetical protein BRAFLDRAFT_123567 [Branchiostoma floridae]
gi|229295010|gb|EEN65658.1| hypothetical protein BRAFLDRAFT_123567 [Branchiostoma floridae]
Length = 844
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 198/390 (50%), Gaps = 80/390 (20%)
Query: 125 LKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLL 184
LK Q+ +K+++KK+ +K+ ++ G + + V++ + + +W L + ++
Sbjct: 235 LKRQREEKRERKKQERKM-------PLAQG-HSCKPQSVAKKSVDADMTSWTPLFVPDVV 286
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK- 243
++ + GF +PTPIQ IP A Q D++GAAETGSGKTLAFG+PI+ R+LE +E+
Sbjct: 287 LRGLADQGFTQPTPIQAQTIPQAI-QAHKDVVGAAETGSGKTLAFGIPILHRILEWKERN 345
Query: 244 -------AGKMLEEKGE-------------------------------EAEKYAPK---- 261
G EE E EA + AP
Sbjct: 346 LQSEEGDLGNKNEEVPEDAADDDDDQEMESGGLGCVHVEDDITLPPELEALQEAPPLSAP 405
Query: 262 ------GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPE 315
L AL++TPTRELA+QV +H+K AK NV+V +VGGM+ +KQ+R+L +PE
Sbjct: 406 TPQKVVSPLLALVLTPTRELAVQVANHIKAAAKYTNVKVAVLVGGMAPQKQKRVLDRQPE 465
Query: 316 LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 375
++V TPGRLWE++ HL +L+ L V+DEADRM+E GHF EL +++D + NG +
Sbjct: 466 IIVATPGRLWEMVEQSHPHLSDLNQLQCLVIDEADRMVEKGHFAELGNLLDKI---NGED 522
Query: 376 EGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETL 435
+ ++RQT VFSAT+ + ++ L L
Sbjct: 523 ----------------RNRRRQTFVFSATLTMVHSGPQRKIMKKKFKMDKDKKLGQ---L 563
Query: 436 SERAGMRANVAIVDLTNVSVLANKLEESFI 465
+R G+R+ +VDL+ + L E+ I
Sbjct: 564 MDRVGIRSKPLVVDLSRQQGTVDTLTEARI 593
>gi|384247532|gb|EIE21018.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 460
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 135/202 (66%), Gaps = 24/202 (11%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
VS A++S AW L L P ++ +I LGF EPTPIQ+ C+ A + D+IGAA+TG
Sbjct: 35 VSAADVS----AWEGLGLGPGVLGAIGGLGFGEPTPIQRECLLPAIRDRR-DVIGAAQTG 89
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 282
SGKTLAFGLPI+Q L+ R K G G LRALI+ PTRELA+QV++H
Sbjct: 90 SGKTLAFGLPILQ--LKGR-KGG----------------GLLRALILAPTRELAMQVSEH 130
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
L+ VAK + V V PIVGG+S KQ RLL RP +VV TPGRLWELM GE HL +L LS
Sbjct: 131 LQAVAKPVGVWVAPIVGGISPPKQARLLGRRPAIVVATPGRLWELMRLGEPHLADLTGLS 190
Query: 343 FFVLDEADRMIENGHFRELQSI 364
F VLDEADRM++ GHF+EL I
Sbjct: 191 FLVLDEADRMVQQGHFQELTCI 212
>gi|195028797|ref|XP_001987262.1| GH20064 [Drosophila grimshawi]
gi|193903262|gb|EDW02129.1| GH20064 [Drosophila grimshawi]
Length = 806
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 182/350 (52%), Gaps = 70/350 (20%)
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAE 220
ELVS + W + + +M+++ G++ PT IQ +PAA H GK DI+GAAE
Sbjct: 186 ELVS-CSAKVDMSKWQGMGIPTSIMRALAEQGYEAPTQIQAMTLPAAIH-GKKDILGAAE 243
Query: 221 TGSGKTLAFGLPIMQRLLEE---------REKAGKM------------------------ 247
TGSGKTLAFG+PI+ ++E R +A K
Sbjct: 244 TGSGKTLAFGIPILSGIMELKQRNDGSGIRTRAPKHKVEATVEAEVPTSKENHELTPPPE 303
Query: 248 -------LEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGINVRVVPIV 298
E+ +AE Y+ G L AL++TPTRELA+QV +HL AK +RV I
Sbjct: 304 ELDYVSGASEEESDAEDYSSSGRRPLYALVLTPTRELAVQVKNHLVAAAKYTGIRVAAIF 363
Query: 299 GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 358
GG+S KQER+L+ PE+VV TPGRLWEL + G KHL ++ ++F +DE DRM+E GHF
Sbjct: 364 GGLSVAKQERVLRQCPEIVVATPGRLWELYAQGNKHLNKIEHVNFLCIDETDRMVEKGHF 423
Query: 359 RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG 418
EL+ ++ +L N E +++ RQ VFSAT+ L D + ++
Sbjct: 424 EELRMLLKVL---NAHEE---------------RKQLRQNFVFSATLTLIHDLPEHMQKR 465
Query: 419 SLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
+L KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 466 NLAKRPKFTKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 512
>gi|328872649|gb|EGG21016.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 909
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 141/222 (63%), Gaps = 19/222 (8%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGA 218
++ + EA + + W L PL++K + LG++ PT IQ IPA+ G DIIGA
Sbjct: 236 QDRIAPEAADTLDMTVWESYNLDPLIIKGLRALGYERPTEIQSQVIPASIQSGN-DIIGA 294
Query: 219 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEA-----------EKYAPKGHLRAL 267
AETGSGKTLAFG+P++ +L K L +GE+ +K L AL
Sbjct: 295 AETGSGKTLAFGIPMVNTIL-------KYLRAQGEDVTRSTLPQVGLLKKDNSHKKLLAL 347
Query: 268 IITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWEL 327
++ PTRELA+QVT+HL+ VA ++R++ +VGG+S +KQ+R L ++PE+VV TPGRLWEL
Sbjct: 348 VLCPTRELAIQVTNHLRTVALETSLRIISVVGGLSQKKQDRELNSKPEIVVATPGRLWEL 407
Query: 328 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
+ G+K+L + L F +DEADRM+E G FRE+ SI++ LP
Sbjct: 408 IDEGDKYLGDFTNLLCFGIDEADRMVEKGVFREIDSILERLP 449
>gi|327302418|ref|XP_003235901.1| ATP-dependent RNA helicase MAK5 [Trichophyton rubrum CBS 118892]
gi|326461243|gb|EGD86696.1| ATP-dependent RNA helicase MAK5 [Trichophyton rubrum CBS 118892]
Length = 746
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 221/429 (51%), Gaps = 58/429 (13%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDE-DGNGVQKE 120
GF LEEI+ + I +P G+ K K ++ NEE DG+E G G + E
Sbjct: 57 GFYGLEEIE----GVDIIRPADGEQLKFLAAKSSIKTGDNEELDDYDDGEEWLGFGDEVE 112
Query: 121 QEKNLKNQKGKKK--------------KKKKKGKKIKTVEESVTVSNGPDDAEEELVSEA 166
Q+ K K +++K K++++ S+ ++A EE +
Sbjct: 113 QQPEPKQLSFKSTENKKKKDKKEREKPRQEKDNAKVQSIPFSIL-----NEANEE--PDV 165
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
++S AW+ L L P L S+ RL F +PTPIQKA IP G D+IG A TGSGKT
Sbjct: 166 DVS----AWDSLDLRPELQTSLSRLKFAQPTPIQKATIPEIL--GGRDVIGKAATGSGKT 219
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
LAFGLPI+Q LL +E+ L + ++K ALI++PTRELA Q+ HLKEV
Sbjct: 220 LAFGLPILQYLLNRQEQHPSTLLALPKSSDKTP-----IALILSPTRELAHQLVKHLKEV 274
Query: 287 ---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 343
A ++ + + GG+S KQ+R L A +++VGTPGRLW+++S + L +L ++ F
Sbjct: 275 TSSAPNVDAYIASVTGGLSVHKQQRQL-AEADIIVGTPGRLWDMVSSTPQILTKLRSIKF 333
Query: 344 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 403
V+DEADR++ GHF+E+ ++ L T S++ E + + RQTLVFSA
Sbjct: 334 LVVDEADRLLSEGHFKEVGELLSALDRTRTSDQDVDETPEEEEEPAG-----RQTLVFSA 388
Query: 404 TIALSADFRKKLKHGSLKLKQSV--NGLNSIET----LSERAGMRANVAIVDLTNVSVLA 457
T F+K L+ K S N L+ E+ L E +D+ VS +A
Sbjct: 389 T------FQKGLQQKLAKRDHSFHDNLLDKKESMEYLLKELRFKDEKPRFIDVNPVSQMA 442
Query: 458 NKLEESFIE 466
+ L+E IE
Sbjct: 443 DNLKEGIIE 451
>gi|405124025|gb|AFR98787.1| ATP-dependent RNA helicase MAK5 [Cryptococcus neoformans var.
grubii H99]
Length = 771
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 167/311 (53%), Gaps = 37/311 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+ + LHP L +S F PT IQ IPA G+ D++G AETGSGKTLA+ LPI+
Sbjct: 173 WSSIPLHPALKRSFLASSFTAPTAIQSRAIPAGV-TGR-DVVGVAETGSGKTLAYSLPIL 230
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI---- 290
LL +R++ K K L ALI+ PTRELALQV DHL + K
Sbjct: 231 HYLLAQRKR-------------KAGIKRPLSALILCPTRELALQVMDHLNALLKHALATS 277
Query: 291 ---------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 341
V V +VGG+S +KQ+R+L +++V TPGRLW+L+ ++ + TL
Sbjct: 278 DGEKPQGPPRVSVGSVVGGLSAQKQKRILDRGCDVIVATPGRLWDLIKADDELATNVRTL 337
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL-----QRKKR 396
F V+DEADRMIENGHF EL+SI+ L + + +G + +++L R
Sbjct: 338 RFLVIDEADRMIENGHFAELESIV-KLTQRSTAQQGPDDNDPVFEAMATLFEESAARDDM 396
Query: 397 QTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSV 455
QT VFSAT LS D +K LK S K +++E L E+ R N ++DL+
Sbjct: 397 QTFVFSAT--LSKDLQKNLKRRSTSWKGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEGG 454
Query: 456 LANKLEESFIE 466
+ + L ES IE
Sbjct: 455 VVSSLRESMIE 465
>gi|324502072|gb|ADY40913.1| ATP-dependent RNA helicase DDX24 [Ascaris suum]
Length = 790
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 175/331 (52%), Gaps = 51/331 (15%)
Query: 133 KKKKKKGKKIKTVEESVT----------VSNGPDDAEEELVSEAEISTEFDAWNELRLHP 182
K K+KK K+ +++ ES++ V G + SE ++S AW L
Sbjct: 178 KPKQKKRKREQSLRESISEDIVENEEERVRGGCEPTSTSHTSEVDLS----AWMPFCLPD 233
Query: 183 LLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEERE 242
+MK++ LGF +PT IQK +P+A + K+D++GAAETGSGKTLA+ +P++ RLL+ +
Sbjct: 234 EIMKALADLGFTKPTEIQKLVLPSAV-RDKLDVLGAAETGSGKTLAYAIPLIVRLLDAQN 292
Query: 243 KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMS 302
E + + HLRALI+ PTREL +Q+ H+ + K N + IVGG+S
Sbjct: 293 SM-----------EDWTLQRHLRALILAPTRELVVQIRKHIDALIKYTNFKATSIVGGLS 341
Query: 303 TEKQERLLKARPELVVGTPGRLWELMSGGEK--HLVELHTLSFFVLDEADRMIENGHFRE 360
+KQERLLK RPE+VV TPGR W L + +L L V+DE DRM+E GHF E
Sbjct: 342 QQKQERLLKYRPEIVVATPGRFWSLAGNAPQGSYLANWQKLLCLVVDETDRMVEKGHFEE 401
Query: 361 LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSL 420
L+ I++ + S KRQTLVFSAT+ ++L ++
Sbjct: 402 LEFILE--------------------AIKSDGNVKRQTLVFSATLTFVHPAPRRL---NI 438
Query: 421 KLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
+ Q + I+ L E G+R + D+T
Sbjct: 439 QQTQQMTTKEKIDRLIEIVGLRKERKVFDIT 469
>gi|410898437|ref|XP_003962704.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Takifugu
rubripes]
Length = 739
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 176/337 (52%), Gaps = 65/337 (19%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
T+ AW +L + ++K++ LGF PTPIQ +P+A K DI+GAAETGSGKTLAF
Sbjct: 154 TDVSAWKDLFVPAPVLKALSSLGFGSPTPIQALTLPSAIRDHK-DILGAAETGSGKTLAF 212
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEE--------------AEKYAPKGH------------ 263
G+P++ +LE ++ + +++E+ E +E Y+ +
Sbjct: 213 GIPMIHTILEWKKNSAELVEDNIEATIPMKSLYLPEPTASENYSVEEEVIKDAETESEDM 272
Query: 264 --------------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERL 309
L L++TPTRELA+QV H+ V+K +++ +VGG+S EKQ R+
Sbjct: 273 TKEEENAAGSFSQPLLGLVLTPTRELAVQVKHHIDAVSKFTDIKTAIVVGGLSQEKQRRM 332
Query: 310 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
LK RPE+++ TPGRLW+L+ HL L + V+DEADRM+E GHF EL+++++ML
Sbjct: 333 LKLRPEIIIATPGRLWDLIKEKHPHLQNLRQVRCLVIDEADRMVERGHFAELENLLEMLK 392
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGL 429
+ + RQ VFSAT+ +L K+S++
Sbjct: 393 TAHFN-------------------PLRQMFVFSATLTTKHSLPTRLLQ-----KRSLDQR 428
Query: 430 NSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ +E L ++ G++A IVDLT L E+ I+
Sbjct: 429 SRLEILIDKVGIKAKPKIVDLTRKEATVETLTETCIQ 465
>gi|392573357|gb|EIW66497.1| hypothetical protein TREMEDRAFT_65359 [Tremella mesenterica DSM
1558]
Length = 744
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 147/434 (33%), Positives = 211/434 (48%), Gaps = 63/434 (14%)
Query: 61 GGFLSLEEIDEASYNLQ-----------IPKPEKGKPGKKTNTKKRKRSSANEEDPGDGD 109
GG + LEE+D+ + IP P GK TK KR + DG+
Sbjct: 45 GGMMMLEELDDVAVEWVQDEGGAKKARFIPAPNSKGKGKAKETKNGKRIAEASNQGIDGE 104
Query: 110 GDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEIS 169
DED + ++QE ++ VEE D E+ L EA
Sbjct: 105 -DED-ETINEDQEITGDDEI----------PSFSRVEEE---DMNEVDQEDHLGDEAFDD 149
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
T W+ + LHP+L +S+ +LGF +PT IQ +P G+ D++G AETGSGKTLA+
Sbjct: 150 TLLPQWSSIPLHPILKRSLSKLGFTKPTDIQARALPVCL-AGR-DVVGVAETGSGKTLAY 207
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 289
LPI+ LL K L +LI+ PTRELALQV DHL V +
Sbjct: 208 ALPILSYLLRN--------------PRATTSKRTLSSLILCPTRELALQVVDHLNTVIRQ 253
Query: 290 I--------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 341
+ V ++GG+S +KQ+R+L +++V TPGRLW+L+ + E+ +
Sbjct: 254 TFPEKKGPPRISVGSVIGGLSAQKQQRILDRGCDVLVATPGRLWDLIKANDDLAAEIKRI 313
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLP-MTNGSNEGQSEQTQTCVTVSS-----LQRKK 395
F V+DEADRMIENGHF EL+SI+ + + S G +E+ +S R
Sbjct: 314 RFLVIDEADRMIENGHFAELESIVRLTERQSRLSGRGAAEEEDPVFAATSSLDDVSARSD 373
Query: 396 RQTLVFSATIA--LSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTN 452
QT +FSAT++ L +F++K K GS K + + L E L ER R N ++DL+
Sbjct: 374 MQTFIFSATLSKDLQQNFKRK-KRGSQKGDKKSSAL---EDLVERLDFRDKNPEVIDLSP 429
Query: 453 VSVLANKLEESFIE 466
+ L+ES IE
Sbjct: 430 EGGVVAMLKESMIE 443
>gi|301103398|ref|XP_002900785.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262101540|gb|EEY59592.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 763
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 141/219 (64%), Gaps = 19/219 (8%)
Query: 159 EEELVSEAEI-STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQ-KACIPAAAHQGKVDII 216
E+ELV + WN+ +LHPLLM+S+ GF PT IQ + +PA D++
Sbjct: 97 EQELVEIVALKDVNLPKWNKFKLHPLLMQSLQTCGFSAPTRIQERTLLPALVDNR--DVV 154
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 276
GAA TGSGKTLAFGLPI+ +LL ERE+ G + + K ALI+TPTRELA
Sbjct: 155 GAAPTGSGKTLAFGLPILSQLLHEREQPGYIKDCK--------------ALILTPTRELA 200
Query: 277 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 336
+Q+ HL+++ + + VV +VGGM+ +KQ+R+L RPE+V+GTPGRLW+++ +H+
Sbjct: 201 IQIQQHLEKMVRNREIGVVTLVGGMAVQKQKRILTYRPEIVIGTPGRLWDIIETNHEHMQ 260
Query: 337 ELHT-LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 374
+L T L F V+DEADRM++ G + EL+ I ++L N S
Sbjct: 261 DLATSLRFLVVDEADRMLQPGSYSELEKIFEVLRRKNKS 299
>gi|158289761|ref|XP_311419.4| AGAP010702-PA [Anopheles gambiae str. PEST]
gi|157018482|gb|EAA07044.4| AGAP010702-PA [Anopheles gambiae str. PEST]
Length = 739
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 204/403 (50%), Gaps = 74/403 (18%)
Query: 97 RSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPD 156
+S N+ +PG+G + QKE E + K ++ + K + VS+ P
Sbjct: 146 KSKKNDREPGEG---AEAATTQKEPEPPKSSSSTKLQQNQSKQNN------ATKVSDKP- 195
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
V E + ++ AW +L + +++++ GFK PT IQ +P A + G+ D++
Sbjct: 196 ------VPEPYSTADYTAWVQLGVSEPIVRALADKGFKVPTEIQNKSLPVAIY-GRRDLL 248
Query: 217 GAAETGSGKTLAFGLPIMQRLLE---------------EREKAGKMLEEKGEEAEKYAPK 261
GAAETGSGKTLAFG+P+++ ++ E + +E E+A+ +A +
Sbjct: 249 GAAETGSGKTLAFGIPMLEGIMHLKKGKKPVADDSSEHEMTPPSEDMEVTEEDAKVFAEE 308
Query: 262 GH-------------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQER 308
G L LI+TPTRELA+Q+ DHLK VAK ++ + + GG++T KQER
Sbjct: 309 GRKLGNSSAAPEDKPLYGLILTPTRELAVQINDHLKAVAKYTDINIATVFGGLATVKQER 368
Query: 309 LLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
+L+ PE+V+ TPGRLWEL+ HL ++ + + V+DE DRM+E GHF EL+ ++L
Sbjct: 369 MLRKCPEIVIATPGRLWELVKSENHHLSKVTDIRYLVIDETDRMLEKGHFEELK---ELL 425
Query: 369 PMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG------SLKL 422
+ N + E +K R+ +FSAT+ + + +K +LKL
Sbjct: 426 ALINANEEA---------------KKLRRNYIFSATLTMDHEMPTHIKRHPKKSKKALKL 470
Query: 423 KQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
N IET+ GM + IVDLT A L ES I
Sbjct: 471 TPGQRMANLIETI----GM-TDPKIVDLTQDHGTARTLTESRI 508
>gi|395503712|ref|XP_003756207.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Sarcophilus harrisii]
Length = 800
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 175/339 (51%), Gaps = 67/339 (19%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + +DI+GAAETGSGKTLAF
Sbjct: 203 DVSAWKDLFVPEPVLRALSSLGFSAPTPIQALAL-APAIRDNLDILGAAETGSGKTLAFA 261
Query: 231 LPIMQRLL---EEREKAGKMLEEKGE---------------------------------- 253
+P++ +L EE+E+AG E+ GE
Sbjct: 262 IPMIHSVLRWQEEQEQAGGHSED-GESLGDANGSSDDGNEEKDGDPSHSPSDEKESADIE 320
Query: 254 -EAEKYAPKGH------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ 306
E E+ P GH L L++TPTRELA+QV H+ VAK ++ +VGGM+ +KQ
Sbjct: 321 LELEEEKPTGHSNRSSPLLGLVLTPTRELAVQVKHHIDAVAKFTGIKTALLVGGMAPQKQ 380
Query: 307 ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
+R+L RPE+V+ TPGRLWEL+ +HL L L V+DEADRM+E GHF EL +++
Sbjct: 381 QRMLTRRPEIVIATPGRLWELIKEQHQHLSNLRQLRCLVIDEADRMVERGHFTELTQLLE 440
Query: 367 MLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSV 426
ML N+ Q +RQT VFSAT+ L ++ K + +
Sbjct: 441 ML------NDSQY-------------NPQRQTFVFSATLTLVHQAPARVFQK--KNAKKI 479
Query: 427 NGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
+ L ++ L ++ GMR ++DLT L E+ I
Sbjct: 480 DKLGKLDMLMQKIGMRGKPKVIDLTRKEATVETLTETKI 518
>gi|134117550|ref|XP_772546.1| hypothetical protein CNBL0260 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818273|sp|P0CQ91.1|MAK5_CRYNB RecName: Full=ATP-dependent RNA helicase MAK5
gi|50255161|gb|EAL17899.1| hypothetical protein CNBL0260 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 772
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 166/311 (53%), Gaps = 37/311 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+ + LHP L +S F PT IQ IPA G+ D++G AETGSGKTLA+ LPI+
Sbjct: 174 WSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGI-TGR-DVVGVAETGSGKTLAYSLPIL 231
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI---- 290
LL G+ K K L AL++ PTRELALQV DHL + K
Sbjct: 232 HYLL-------------GQRKSKAGIKRPLSALVLCPTRELALQVMDHLNALLKHALATP 278
Query: 291 ---------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 341
V V +VGG+S +KQ+R+L+ +++V TPGRLW+L+ ++ + TL
Sbjct: 279 DGEKPQGPPRVSVGSVVGGLSAQKQKRILERGCDVIVATPGRLWDLIKADDELATSVRTL 338
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE-----QTQTCVTVSSLQRKKR 396
F V+DEADRMIENGHF EL+SI+ L + + +G + Q + S R+
Sbjct: 339 RFLVIDEADRMIENGHFAELESIV-KLTQRSTAQQGPDDDDPVFQAMATLFEESTAREDM 397
Query: 397 QTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSV 455
QT VFSAT LS D +K LK S K +++E L E+ R N ++DL+
Sbjct: 398 QTFVFSAT--LSKDLQKNLKRRSRSWKGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEGG 455
Query: 456 LANKLEESFIE 466
+ + L ES IE
Sbjct: 456 VVSSLRESMIE 466
>gi|326475209|gb|EGD99218.1| ATP-dependent RNA helicase MAK5 [Trichophyton tonsurans CBS 112818]
Length = 742
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 179/312 (57%), Gaps = 31/312 (9%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
++ E + AW+ L L P L S+ RL F +PTPIQKA IP G+ D+IG A TGS
Sbjct: 158 TDEEADVDVSAWDSLDLRPELQTSLSRLKFAQPTPIQKATIPEIL-SGR-DVIGKAATGS 215
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 283
GKTLAFGLPI+Q LL+ +EK L + +++ ALI++PTRELA Q+ HL
Sbjct: 216 GKTLAFGLPILQYLLKRQEKRPSALSKSSDKSPI--------ALILSPTRELAHQLVKHL 267
Query: 284 KEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 340
KEV A ++ + + GG+S KQ+R L A ++VVGTPGRLW+++S K L +L +
Sbjct: 268 KEVTSSAPNVDAYIASVTGGLSVYKQQRQL-AEADIVVGTPGRLWDMVSSTPKILTKLRS 326
Query: 341 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
+ F V+DEADR++ GHF+E+ ++ L T S+E E ++ +S RQTLV
Sbjct: 327 IKFLVVDEADRLLSEGHFKEVGELLSALDKTRTSDEDVDEASEEEEEPAS-----RQTLV 381
Query: 401 FSATIALSADFRKKLKHGSLKLKQSV-NGL----NSIETLSERAGMR-ANVAIVDLTNVS 454
FSAT F+K L+ K S N L S+E L ++ + +D+ VS
Sbjct: 382 FSAT------FQKGLQQKLAKRDHSFHNNLLDKKESMEYLLKKLRFKDEKPRFIDVNPVS 435
Query: 455 VLANKLEESFIE 466
+A+ L+E IE
Sbjct: 436 QMADNLKEGIIE 447
>gi|58270130|ref|XP_572221.1| ATP dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|338818274|sp|P0CQ90.1|MAK5_CRYNJ RecName: Full=ATP-dependent RNA helicase MAK5
gi|57228479|gb|AAW44914.1| ATP dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 772
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 166/311 (53%), Gaps = 37/311 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+ + LHP L +S F PT IQ IPA G+ D++G AETGSGKTLA+ LPI+
Sbjct: 174 WSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGI-TGR-DVVGVAETGSGKTLAYSLPIL 231
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI---- 290
LL G+ K K L AL++ PTRELALQV DHL + K
Sbjct: 232 HYLL-------------GQRKSKAGIKRPLSALVLCPTRELALQVMDHLNALLKHALATP 278
Query: 291 ---------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 341
V V +VGG+S +KQ+R+L+ +++V TPGRLW+L+ ++ + TL
Sbjct: 279 DGEKPQGPPRVSVGSVVGGLSAQKQKRILERGCDVIVATPGRLWDLIKADDELATSVRTL 338
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE-----QTQTCVTVSSLQRKKR 396
F V+DEADRMIENGHF EL+SI+ L + + +G + Q + S R+
Sbjct: 339 RFLVIDEADRMIENGHFAELESIV-KLTQRSTAQQGPDDDDPVFQAMATLFEESTAREDM 397
Query: 397 QTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSV 455
QT VFSAT LS D +K LK S K +++E L E+ R N ++DL+
Sbjct: 398 QTFVFSAT--LSKDLQKNLKRRSRSWKGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEGG 455
Query: 456 LANKLEESFIE 466
+ + L ES IE
Sbjct: 456 VVSSLRESMIE 466
>gi|326479695|gb|EGE03705.1| ATP-dependent RNA helicase MAK5 [Trichophyton equinum CBS 127.97]
Length = 742
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 179/312 (57%), Gaps = 31/312 (9%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
++ E + AW+ L L P L S+ RL F +PTPIQKA IP G+ D+IG A TGS
Sbjct: 158 TDEEADVDVSAWDSLDLRPELQTSLSRLKFAQPTPIQKATIPEIL-SGR-DVIGKAATGS 215
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 283
GKTLAFGLPI+Q LL+ +EK L + +++ ALI++PTRELA Q+ HL
Sbjct: 216 GKTLAFGLPILQYLLKRQEKRPSALSKSSDKSPI--------ALILSPTRELAHQLVKHL 267
Query: 284 KEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 340
KEV A ++ + + GG+S KQ+R L A ++VVGTPGRLW+++S K L +L +
Sbjct: 268 KEVTSSAPNVDAYIASVTGGLSVYKQQRQL-AEADIVVGTPGRLWDMVSSTPKILTKLRS 326
Query: 341 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
+ F V+DEADR++ GHF+E+ ++ L T S+E E ++ +S RQTLV
Sbjct: 327 IKFLVVDEADRLLSEGHFKEVGELLSALDKTRTSDEDVDEASEEEEEPAS-----RQTLV 381
Query: 401 FSATIALSADFRKKLKHGSLKLKQSV-NGL----NSIETLSERAGMR-ANVAIVDLTNVS 454
FSAT F+K L+ K S N L S+E L ++ + +D+ VS
Sbjct: 382 FSAT------FQKGLQQKLAKRDHSFHNNLLDKKESMEYLLKKLRFKDEKPRFIDVNPVS 435
Query: 455 VLANKLEESFIE 466
+A+ L+E IE
Sbjct: 436 QMADNLKEGIIE 447
>gi|405950996|gb|EKC18946.1| ATP-dependent RNA helicase DDX24 [Crassostrea gigas]
Length = 1159
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 191/338 (56%), Gaps = 46/338 (13%)
Query: 126 KNQKGKKKKKKKKG--------KKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNE 177
K++K +K+K+K K++K +EES + PDD + I+ + AW +
Sbjct: 176 KSEKKTARKRKEKFVDSYSSERKRMKVMEESEEETKSPDDGK--------INEKMAAWKD 227
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI---- 233
L + +++++ + F PTPIQ +P+A K D++GAAETGSGKTLAFG+P+
Sbjct: 228 LFVPKEVLQALCKSKFFAPTPIQAMALPSAIRDRK-DVVGAAETGSGKTLAFGIPVGDLG 286
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+++++ + + L + G +K + K L ALI+ PTRELA+QV DHL+ A ++
Sbjct: 287 CVKVIDDADFSELGLPDAGPLLKK-SNKSPL-ALILQPTRELAVQVKDHLQVAAAYTDIT 344
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ PI+GGMS EKQ+R+LK P+++V TPGRLWELMS + +L + + V+DEADRMI
Sbjct: 345 IAPILGGMSAEKQKRILKKCPDILVATPGRLWELMS-QDPYLSRIDEVDTLVIDEADRMI 403
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 413
E GHF EL I++ + NE ++ RQT VFSAT+ L +
Sbjct: 404 EKGHFEELTQILNYI----NRNEK--------------KKNTRQTFVFSATLTLVHSGPQ 445
Query: 414 KLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
+ S + K ++ +ETL R MR ++DLT
Sbjct: 446 R----SSRKKMALTEEKKLETLMSRIQMREKPKVIDLT 479
>gi|322710764|gb|EFZ02338.1| ATP dependent RNA helicase, putative [Metarhizium anisopliae ARSEF
23]
Length = 794
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 208/383 (54%), Gaps = 32/383 (8%)
Query: 104 DPGDGDGDEDGNGVQKEQE--------KNLKNQKGKKK-----KKKKKGKKIKTVEESVT 150
D G+G +DG +K QE K K QKG+++ +KK K +KI + +
Sbjct: 126 DSGEGSDSQDGLEGEKSQETISAVKQGKASKTQKGQQQSDNGTQKKSKQQKIADKKLQKS 185
Query: 151 VSNGPDDAEEELVSEAEISTEFDA-----WNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
S+G + L + A+ E D W L L P L+ +I +LGF +PT IQ+ IP
Sbjct: 186 ASHGAGNEFLALAAMADEEAETDDLDMGDWVALNLSPNLVSAIAKLGFSKPTAIQEKSIP 245
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLR 265
G D+IG A+TGSGKTLAFG+PI+++ L+ E+ + G++ K +G +
Sbjct: 246 EIIAGG--DVIGKAQTGSGKTLAFGIPIVEKWLDMHEEQEDQAGDDGDQPNKKNREGPM- 302
Query: 266 ALIITPTRELALQVTDHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
A+I++PTRELA Q+ DH+K V G+ + + + GG+S +KQ+R L+ + ++V+GTPGR
Sbjct: 303 AVILSPTRELAKQIGDHIKAVCDGLPASPYICVVTGGLSIQKQQRQLE-KADIVIGTPGR 361
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
LWE++ G K + + F V+DEADR+ + G F+E ++II L N G S+ +
Sbjct: 362 LWEVLDGDAKLQQQFTRIKFLVVDEADRLFKVGQFKEAENIIGALDRENPEENGYSDNSD 421
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
+ + ++RQTLVFSAT + + KL G K ++ + + L + R
Sbjct: 422 -----AEDETRERQTLVFSAT--FDKNLQTKLA-GKGKSAKTGSDEEKMAYLMKCLKFRG 473
Query: 444 NVAIVDLTNVSVLANKLEESFIE 466
+D+ VS +A+ L E IE
Sbjct: 474 EPKFIDVNPVSQMADNLREGLIE 496
>gi|328771868|gb|EGF81907.1| hypothetical protein BATDEDRAFT_10092 [Batrachochytrium
dendrobatidis JAM81]
Length = 529
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 151/260 (58%), Gaps = 33/260 (12%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
++ +++ P ++E +V ++ ++ W E L+ L++++++LGF PT IQ +
Sbjct: 123 HDTFHITDAPV-SDEPIVDHYKVPSD-SKWLEFGLNLQLVQTLHKLGFSCPTDIQAKSLE 180
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLR 265
+ K DIIGAAETGSGKTLAFGLPI+ L + +K P
Sbjct: 181 NTLVRHK-DIIGAAETGSGKTLAFGLPILHHLAIQLQKN---------------PNTACI 224
Query: 266 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
LIITPTRELA+QV+DHLK I ++ PIVGGMS +KQ RL+ +P ++VGTPGRLW
Sbjct: 225 GLIITPTRELAIQVSDHLKRAGAAITHKITPIVGGMSLQKQRRLIATKPHIIVGTPGRLW 284
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTC 385
EL+ + L L ++ V+DEADRM+E GHF++L SI+ + + N N Q
Sbjct: 285 ELIQEDPELLDMLKHTTYLVIDEADRMLEAGHFKDLDSILGCISVCNTDNASQI------ 338
Query: 386 VTVSSLQRKKRQTLVFSATI 405
KR+T+VFSAT+
Sbjct: 339 ---------KRRTMVFSATM 349
>gi|328778593|ref|XP_001122313.2| PREDICTED: ATP-dependent RNA helicase DDX24-like [Apis mellifera]
Length = 747
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 176/328 (53%), Gaps = 57/328 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W L + ++K++ F +PTPIQ +P A G DI+GAAETGSGKTLAFG+PI+
Sbjct: 140 WQILGVSTPIIKALKDQQFYQPTPIQALTLPPAI-LGHRDILGAAETGSGKTLAFGIPII 198
Query: 235 QRLLEEREKA------------GKMLEEKG---------------------EEAEKYAPK 261
+LE + K K++E KG E+ +K +
Sbjct: 199 NGILELKNKQSDQINIKSEKERNKIIENKGWICSENKTIEIDNSSSESDYEEDIDKNYME 258
Query: 262 GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTP 321
L ALI+TPTRELA+Q+ DHL + AK +++++ ++GGM+ KQER+L PE+V+ TP
Sbjct: 259 KPLYALILTPTRELAIQIKDHLTKAAKYVDIKIAVVLGGMAAVKQERILSKGPEIVIATP 318
Query: 322 GRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQ 381
GRLWEL+ G HL ++ ++ + V+DE DRM+E GHF+ELQ +++ + +NE
Sbjct: 319 GRLWELIQYGNPHLCKVDSVKYLVIDETDRMLEKGHFQELQQLLEKI----NTNEK---- 370
Query: 382 TQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK----HGSLKLKQSVNGLNSIETLSE 437
+ ++RQT VFSAT+ + D + L+ + + +E + E
Sbjct: 371 ----------RLRERQTFVFSATLTMVHDIPEYLQKKKRKHIKSKIKKLTPSQKLEKIME 420
Query: 438 RAGMRANVAIVDLTNVSVLANKLEESFI 465
G++ N I+D+T S + L E I
Sbjct: 421 LVGIK-NPKIIDVTKESGITANLTECRI 447
>gi|322795046|gb|EFZ17894.1| hypothetical protein SINV_04950 [Solenopsis invicta]
Length = 736
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 186/349 (53%), Gaps = 49/349 (14%)
Query: 143 KTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
+ ++ +S D +++E ++E I AW+ + + ++K++ F PT IQ
Sbjct: 114 RQIDSDSDLSCDMDSSKKESLAEINIG----AWSSMGVPAAVIKALADQNFHSPTMIQAQ 169
Query: 203 CIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG------KMLEEKGEEAE 256
+PAA G+ DI+GAAETGSGKTLAFG+PI++ +L+ + + K + E E E
Sbjct: 170 TLPAAI-LGRRDILGAAETGSGKTLAFGIPIIKGILDLKSQNDGQNCPVKEIGETDSENE 228
Query: 257 KYA-----------------PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
+ P ALI+TPTRELA+Q+ +HL + AK ++++ ++G
Sbjct: 229 DLSQNCVNVVNNAKLDDHNTPIKPFYALILTPTRELAVQIKNHLTQAAKYTDIKIAIVLG 288
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
GM+ KQER+L PE+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+
Sbjct: 289 GMAAVKQERILNKGPEIVIATPGRLWELIEEGNSHLNQIDSVRYLAIDETDRMMEKGHFQ 348
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
EL D+L N + E +RKKRQT VFSAT+ + D L
Sbjct: 349 ELH---DILEKMNANPE---------------KRKKRQTFVFSATLTMVHDLPDYLDKKK 390
Query: 420 LKLKQS-VNGLNSIETLSERAGMR--ANVAIVDLTNVSVLANKLEESFI 465
+ +S + L S + L + + N +VDLT S +A+ L E I
Sbjct: 391 KRYARSKICKLTSDQKLQKIIQLLKIKNPKVVDLTKQSGMADNLTECRI 439
>gi|321261600|ref|XP_003195519.1| ATP dependent RNA helicase [Cryptococcus gattii WM276]
gi|317461993|gb|ADV23732.1| ATP dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 772
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 165/311 (53%), Gaps = 37/311 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+ + LHP L +S F PT IQ IPA G+ D++G AETGSGKTLA+ LPI+
Sbjct: 174 WSSISLHPALKRSFLASSFTAPTAIQSRAIPAGI-TGR-DVVGVAETGSGKTLAYALPIL 231
Query: 235 QRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI--- 290
LL +R+ +AG K L AL++ PTRELALQV DHL + K
Sbjct: 232 HYLLGQRKLRAGI--------------KRPLSALVLCPTRELALQVMDHLNALLKHALAT 277
Query: 291 ----------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 340
+ V +VGG+S +KQ+R+L ++++ TPGRLW+L+ ++ + T
Sbjct: 278 SDGEKPQGPPRISVGSVVGGLSAQKQKRILDRGCDVIIATPGRLWDLIKADDELATSVRT 337
Query: 341 LSFFVLDEADRMIENGHFRELQSIIDMLPMTN----GSNEGQSEQTQTCVTVSSLQRKKR 396
L F V+DEADRMIENGHF EL+SI+ + + ++ Q + S+ R
Sbjct: 338 LRFLVIDEADRMIENGHFAELESIVKLTQRSTVKQGPDDDDPVFQAMATIFEESVARDDM 397
Query: 397 QTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSV 455
QT VFSAT LS D + LK S K +++E L E+ R N ++DL+
Sbjct: 398 QTFVFSAT--LSKDLQTNLKRRSRSWKGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEGG 455
Query: 456 LANKLEESFIE 466
+ + L ES IE
Sbjct: 456 VVSSLRESMIE 466
>gi|391340745|ref|XP_003744697.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Metaseiulus
occidentalis]
Length = 757
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 152/263 (57%), Gaps = 52/263 (19%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC-I 204
EE V+V DDAE+ L E W + P ++K++ +L + EP+ IQ C I
Sbjct: 233 EEDVSVE--LDDAEKALTKE---------WEIFEIEPRILKALAQLRYTEPSEIQSQCLI 281
Query: 205 PAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL 264
PA + ++DI+GAAETGSGKTLAFG+P++ RLL+ER + L
Sbjct: 282 PAI--RDRLDILGAAETGSGKTLAFGIPLVHRLLQER------------------CRNKL 321
Query: 265 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
ALI+TPTRELA+Q+ HL ++ K N+ VV IVGG+S EKQ RLL RPE++V TPGRL
Sbjct: 322 GALILTPTRELAVQIKKHLMDITKFTNLHVVCIVGGLSHEKQTRLLAKRPEIIVATPGRL 381
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQT 384
+EL+ + +L ++ V+DEADRMI+ GHF E+Q I+ + N + G
Sbjct: 382 FELVQEDPQLQEQLISVRCLVIDEADRMIQKGHFEEMQLILKFM---NSNRIG------- 431
Query: 385 CVTVSSLQRKKRQTLVFSATIAL 407
KRQ LVFSAT+ +
Sbjct: 432 ----------KRQNLVFSATLTM 444
>gi|302510172|ref|XP_003017046.1| hypothetical protein ARB_05340 [Arthroderma benhamiae CBS 112371]
gi|291180616|gb|EFE36401.1| hypothetical protein ARB_05340 [Arthroderma benhamiae CBS 112371]
Length = 746
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 178/314 (56%), Gaps = 36/314 (11%)
Query: 165 EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSG 224
EA+I + AW+ L L P L S+ RL F +PTPIQKA IP G D+IG A TGSG
Sbjct: 162 EADI--DVSAWDSLDLRPELQTSLSRLRFAQPTPIQKATIPEIL--GGRDVIGKAATGSG 217
Query: 225 KTLAFGLPIMQRLL---EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 281
KTLAFGLPI+Q LL E+R L + G++ ALI++PTRELA Q+
Sbjct: 218 KTLAFGLPILQCLLNRQEQRPSTSLALSKSGDKKPI--------ALILSPTRELAHQLVK 269
Query: 282 HLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 338
HLKEV A ++ + + GG+S KQ+R L A +++VGTPGRLW+++S + L +L
Sbjct: 270 HLKEVTSSAPNVDAYIASVTGGLSVHKQQRQL-AEADIIVGTPGRLWDMVSSTPQILTKL 328
Query: 339 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQT 398
++ F V+DEADR++ GHF+E+ ++ L T S+E E + + RQT
Sbjct: 329 RSIKFLVVDEADRLLSEGHFKEVGELLSALDKTRTSDEDVDEAPEEEEEPAG-----RQT 383
Query: 399 LVFSATIALSADFRKKLKHGSLKLKQSV--NGLN---SIETLSERAGMR-ANVAIVDLTN 452
LVFSAT F+K L+ +K S N L+ S+E L ++ R +D+
Sbjct: 384 LVFSAT------FQKGLQQKLVKRDHSFHDNLLDKKESMEYLLKKLRFRDEKPRFIDVNP 437
Query: 453 VSVLANKLEESFIE 466
VS +A+ L+E IE
Sbjct: 438 VSQMADNLKEGIIE 451
>gi|332028699|gb|EGI68731.1| ATP-dependent RNA helicase DDX24 [Acromyrmex echinatior]
Length = 743
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 233/457 (50%), Gaps = 82/457 (17%)
Query: 56 SNELDGGFLSLEEIDEASYNLQIPKPEKGKPGKKTNTK----KRKRSSANEEDPGDGDGD 111
SN+++G + +EE+ + YNL+ K GK T+ K K+S + + P + + +
Sbjct: 23 SNDIEG-LIGIEELTD--YNLE----RSSKKGKIITTRVKSTKEKKSVSKRKYPKEWE-E 74
Query: 112 EDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPD-------------DA 158
D N ++ +K+ K ++ + K+ K K +KIK+ +T D+
Sbjct: 75 TDINNIEPSTKKS-KIKQAEVKRLKIKNEKIKSANFKITDQQTNSDSDNSDSDSYCDIDS 133
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGA 218
+ L A+I+ E AW + + ++K++ F PT IQ +PAA G+ DI+GA
Sbjct: 134 NKNL---AKINAE--AWRSMGVPTAVIKALADQNFHSPTMIQTQTLPAAI-LGRRDILGA 187
Query: 219 AETGSGKTLAFGLPIMQRLLE-------------------------EREKAGKMLEEKGE 253
AETGSGKTLAFG+PI++ +L+ E + ++ +K
Sbjct: 188 AETGSGKTLAFGIPIIKGILDLKNQNKDQNSEKDTEESDSENIVLSEFDNCVNIVNDKKL 247
Query: 254 EAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKAR 313
+ P L ALI+TPTRELA+Q+ +HL + AK ++++ ++GGM+ KQER+L
Sbjct: 248 DDCHNIPTKPLYALILTPTRELAMQIKNHLTQAAKYTDIKIAVVLGGMAAVKQERILNKG 307
Query: 314 PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 373
PE+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+EL D+L N
Sbjct: 308 PEIVIATPGRLWELIQEGNSHLNQIDSIRYLAIDETDRMMEKGHFQELH---DLLEKMNA 364
Query: 374 SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF-----RKKLKHGSLKLKQSVNG 428
+ +KRQT VFSAT+ + D RKK ++ K+ + +
Sbjct: 365 ---------------DPAKMQKRQTFVFSATLTMVHDLPDYLDRKKKRYARSKICK-LTP 408
Query: 429 LNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
++ + + ++ N +VDLT S A+ L E I
Sbjct: 409 DQKLQKIIQLLKIK-NPKVVDLTKESGTADNLTECRI 444
>gi|91207159|sp|Q2UMY7.1|MAK5_ASPOR RecName: Full=ATP-dependent RNA helicase mak5
gi|83766938|dbj|BAE57078.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 757
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 236/468 (50%), Gaps = 67/468 (14%)
Query: 40 SSFSAADNDPFAFLVGSNELD-------------GGFLSLEEIDEASYNLQIPKPEKGKP 86
S +A D+D + +VG NEL+ GGF LEEI+ + I + E G
Sbjct: 26 SDATAEDSD-WDGIVGMNELNWKEVALPDRLEDAGGFFGLEEIE----GVDIIRSE-GNG 79
Query: 87 GKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKK--------- 137
K K+ + ++ +D +G GD+D V +E+ K +++ + KK K
Sbjct: 80 EIKFKKKEPEETNTQSDDEWEGFGDDD-QAVSQEESKETQDEPNESDKKAKVKESKNAKK 138
Query: 138 ----------KGKKIKTVE--ESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLM 185
K +K K VE E + +G A L E + + AW L L P ++
Sbjct: 139 EKKKNAKDARKEQKEKAVESKEDKGIKSGLSFAA--LQEEEDDGADVSAWESLGLSPEIL 196
Query: 186 KSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEE-REKA 244
I ++ F PT +QKACIP G+ D+IG A TGSGKTLAFG+PI++ LE+ R K
Sbjct: 197 AGISKMKFTTPTSVQKACIPPIL-DGR-DVIGKASTGSGKTLAFGIPILEYYLEKLRSKT 254
Query: 245 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGINVRVVPIVGGM 301
+K E + P AL+++PTRELA Q+ H+ EV A G+N R+ + GG+
Sbjct: 255 -----QKDSEKTETTPI----ALVLSPTRELAHQLAKHIGEVVSHAPGVNARIALLTGGL 305
Query: 302 STEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 361
S +KQ+R+L ++V+GTPGR+WE++S G + ++ + F V+DEADR++ GHF+E
Sbjct: 306 SLQKQQRVL-TNADIVIGTPGRVWEVLSSGHGLIRKMQAIKFLVIDEADRLLSEGHFKEA 364
Query: 362 QSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIALSADFRKKLK-HGS 419
I+ L +G+ + + L K RQTLVFSAT D ++KL G
Sbjct: 365 HEILAALDRV---VDGEFPDESSDESDDELDPKSGRQTLVFSAT--FHRDLQQKLAGKGK 419
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 466
++ S+E L ++ R +D+ VS +A L+E +E
Sbjct: 420 WTGGDIMSQKESMEYLLQKLNFREEKPRFIDVNPVSQMAENLKEGIVE 467
>gi|320039765|gb|EFW21699.1| ATP-dependent RNA helicase MAK5 [Coccidioides posadasii str.
Silveira]
Length = 783
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/504 (30%), Positives = 242/504 (48%), Gaps = 83/504 (16%)
Query: 20 RRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GFLSL 66
+R K A+ + K+N++ + + +D +V ++LD GF L
Sbjct: 4 KRSHNHKDHTAKAIKRRKFNAATAKSSDDAAHDIVSVDQLDWKTVTLPDRLDDAEGFYGL 63
Query: 67 EEIDEASYNLQIPKPEKGKPGK------------KTNTKKRKRSSAN-EEDPGDGDGDED 113
EEI+ + I +P G K K +T K + + + EE G GD E
Sbjct: 64 EEIE----GVDILRPSGGGEIKFRASKSKIKGILKNSTDKSGQPAEDWEEWSGFGDDSEG 119
Query: 114 GNGVQKEQEKNLKNQKGKKKKK----------------KKKGKKIKT---VEESVTVSNG 154
G+ E EK +N ++ K +G +IKT ++ V+ +
Sbjct: 120 GDRTTFEAEKKAENHGKVNDRRTKTNHSNKEKESNTLPKDRGPRIKTDNGIKTGVSFAAL 179
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
D+ EE++ + AW+ L L L S+ RL F PTPIQ ACIPA QG D
Sbjct: 180 QDEVEEDV--------DVSAWDSLDLSAELQTSLGRLKFSFPTPIQSACIPAVL-QGH-D 229
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
+IG A TGSGKTLAFG+PI++ L + + G+ E P ALI++PTRE
Sbjct: 230 VIGKASTGSGKTLAFGIPIVEYFLG-KYRGGRAPTASEESESTKEPM----ALILSPTRE 284
Query: 275 LALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
LA Q+ HL ++ A VR+ + GG+S KQ+RLL A ++++ TPGRLWE++
Sbjct: 285 LAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLL-ADADIIIATPGRLWEVVGSM 343
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 391
L +L + F V+DEADR++ GHF+E++ I++ + + E E+++
Sbjct: 344 TGFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGERSEREPEPEPD 403
Query: 392 QRKK---RQTLVFSATIALSADFRKKLKH---GSLKLKQS--VNGLNSIETLSERAGMR- 442
+ KK RQTLVFSAT F K L+ G ++ + ++ S+E L + R
Sbjct: 404 EEKKAEPRQTLVFSAT------FHKGLQQKLSGKIRYRNDDLLDKKESMEYLLRKLNFRE 457
Query: 443 ANVAIVDLTNVSVLANKLEESFIE 466
+D+ +S +A L+E ++
Sbjct: 458 ERPKFIDVNPISQMAENLKEGLVQ 481
>gi|303311697|ref|XP_003065860.1| ATP-dependent RNA helicase MAK5, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105522|gb|EER23715.1| ATP-dependent RNA helicase MAK5, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 783
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/504 (30%), Positives = 242/504 (48%), Gaps = 83/504 (16%)
Query: 20 RRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GFLSL 66
+R K A+ + K+N++ + + +D +V ++LD GF L
Sbjct: 4 KRSHNHKDHTAKAIKRRKFNAATAKSSDDAAHDIVSVDQLDWKTVTLPDRLDDAEGFYGL 63
Query: 67 EEIDEASYNLQIPKPEKGKPGK------------KTNTKKRKRSSAN-EEDPGDGDGDED 113
EEI+ + I +P G K K +T K + + + EE G GD E
Sbjct: 64 EEIE----GVDILRPSGGGEIKFRASKSKIKGILKNSTDKSGQPAEDWEEWSGFGDDSEG 119
Query: 114 GNGVQKEQEKNLKNQKGKKKKK----------------KKKGKKIKT---VEESVTVSNG 154
G+ E EK +N ++ K +G +IKT ++ V+ +
Sbjct: 120 GDRTTFEAEKKAENHGKVNDRRTKTNHSNKEKESNTLPKDRGPRIKTDNGIKTGVSFAAL 179
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
D+ EE++ + AW+ L L L S+ RL F PTPIQ ACIPA QG D
Sbjct: 180 QDEVEEDV--------DVSAWDSLDLSAELQTSLGRLKFSFPTPIQSACIPAVL-QGH-D 229
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
+IG A TGSGKTLAFG+PI++ L + + G+ E P ALI++PTRE
Sbjct: 230 VIGKASTGSGKTLAFGIPIVEYFLG-KYRGGRAPTASEESESTKEPM----ALILSPTRE 284
Query: 275 LALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
LA Q+ HL ++ A VR+ + GG+S KQ+RLL A ++++ TPGRLWE++
Sbjct: 285 LAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLL-ADADIIIATPGRLWEVVGSM 343
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 391
L +L + F V+DEADR++ GHF+E++ I++ + + E E+++
Sbjct: 344 TGFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGERSEREPEPEPD 403
Query: 392 QRKK---RQTLVFSATIALSADFRKKLKH---GSLKLKQS--VNGLNSIETLSERAGMR- 442
+ KK RQTLVFSAT F K L+ G ++ + ++ S+E L + R
Sbjct: 404 EEKKAEPRQTLVFSAT------FHKGLQQKLSGKIRYRNDDLLDKKESMEYLLRKLNFRE 457
Query: 443 ANVAIVDLTNVSVLANKLEESFIE 466
+D+ +S +A L+E ++
Sbjct: 458 ERPKFIDVNPISQMAENLKEGLVQ 481
>gi|353235877|emb|CCA67883.1| related to MAK5-ATP-dependent RNA helicase [Piriformospora indica
DSM 11827]
Length = 703
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 173/306 (56%), Gaps = 33/306 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+ L L P L++ I GF +PTPIQ+ +P + G+ D+IG A+TGSGKTLAF LPI+
Sbjct: 127 WSNLGLSPTLLRRIKDQGFIKPTPIQRETLPLST-SGR-DVIGIAQTGSGKTLAFALPIL 184
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN--- 291
+ +L K L + K +L+ALI+ PTRELALQV+ H+ A +
Sbjct: 185 RHILSTNRL--KSLRRQ---------KRNLKALIVAPTRELALQVSAHINACAPQRSKEE 233
Query: 292 --------VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 343
V V IVGGMS +KQ R+L+ +++V TPGRLWEL+S ++ ++ + F
Sbjct: 234 IEAHLPPLVSVATIVGGMSQQKQTRMLERGADVIVATPGRLWELLSDNDELTTQIRQVRF 293
Query: 344 FVLDEADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 402
FVLDEADRM+ENGHF EL II + + S E Q ++ + S + + QT VFS
Sbjct: 294 FVLDEADRMVENGHFAELDKIIRLTARPDPNSLEAQIQEVKLEDDTSDSAQNQMQTFVFS 353
Query: 403 ATIALSADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKL 460
AT +S D ++ LK H K K S ++I+ L R R AIVDL+ + +
Sbjct: 354 AT--MSKDLQQNLKRHKRFKDKSS----STIDDLILRLDFRDEQPAIVDLSPKDGVVSTF 407
Query: 461 EESFIE 466
+ES +E
Sbjct: 408 QESKVE 413
>gi|157119653|ref|XP_001653437.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108875246|gb|EAT39471.1| AAEL008728-PA [Aedes aegypti]
Length = 813
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 174/341 (51%), Gaps = 67/341 (19%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E+ W EL + +++++ GF+ PT IQ +P A GK D++GAAETGSGKTLAFG
Sbjct: 212 EYFKWTELGVSEPIVRALADKGFQTPTEIQTLSLPVAI-MGKRDLLGAAETGSGKTLAFG 270
Query: 231 LPIMQRLL-------------------EEREKAGKMLEEKGEEAEKYAPKGH-------- 263
+P+++ ++ EE ++ G + EE E Y +
Sbjct: 271 IPLLEGIMKLKASEPYRVRKCENASPKEEEQREGHEMTPPPEELEYYPDPSNGDSSVMLQ 330
Query: 264 --------------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERL 309
L ALI+TPTRELA+Q+ DHLK + K ++++ + GG++ KQER+
Sbjct: 331 QNLEKEEDPQLDKPLYALILTPTRELAVQINDHLKAITKYTDIKIATVFGGLAAVKQERM 390
Query: 310 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
LK PE+V+ TPGRLWEL+ HL ++ + F V+DE DRM+E GHF EL+ +++M+
Sbjct: 391 LKKCPEIVIATPGRLWELIQARNPHLCKVDEIRFLVIDETDRMLERGHFEELKQLLEMI- 449
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL-----KHGSLKLKQ 424
N + E K R+ +FSAT+ + D + L K+ + + +
Sbjct: 450 --NNNEEAT---------------KLRRNYIFSATLTMDHDLPEHLVAKAKKNKKIHITK 492
Query: 425 SVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
G + L + GM N +VD+T A+ L ES I
Sbjct: 493 ETTG-QRLNNLVQIIGM-TNPKVVDITQQHGTAHTLIESRI 531
>gi|325185978|emb|CCA20482.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 743
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 165/294 (56%), Gaps = 37/294 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W LH ++++++ F PT IQ+ I AA Q + D++G A TGSGKTLAFG+PI+
Sbjct: 152 WEAFNLHHTILEALHDNKFLAPTVIQRKAIAAALIQ-REDVVGIASTGSGKTLAFGIPIL 210
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L + +G + G +ALII PTRELALQ+ HLK + K ++ +
Sbjct: 211 QHFLNK--TSGALKSHPG-----------CKALIIAPTRELALQIQKHLKAMLKDGSIGI 257
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH-TLSFFVLDEADRMI 353
+VGGMS +KQER+L PE+V+ TPGRLW+++ G KH LH +L F V+DEADRM+
Sbjct: 258 SVLVGGMSLQKQERVLSYEPEIVIATPGRLWDIVQNGNKHFENLHLSLEFLVVDEADRML 317
Query: 354 ENGHFRELQSIIDML---PMTNGSNEG---QSEQTQTCVTVSSLQRKK----------RQ 397
+ G +++L+ ++ ++ P + ++ G +E +T + ++ ++ RQ
Sbjct: 318 QTGSYKDLEKLLKLINSKPASTKASRGGDSDAEDKKTLLREDAVNTRQFDLRGNKAQSRQ 377
Query: 398 TLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
T +FSAT+ RKK G N L+ + T+ +R G R I+DL+
Sbjct: 378 TFLFSATMTGKCHNRKKQSKG------KTNTLDMLHTVIQRVGFRKKPTIIDLS 425
>gi|261205266|ref|XP_002627370.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis SLH14081]
gi|239592429|gb|EEQ75010.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis SLH14081]
Length = 772
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 153/506 (30%), Positives = 235/506 (46%), Gaps = 92/506 (18%)
Query: 21 RKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GFLSLE 67
+KR R +R+ + + + + AD + +VG ++LD GF LE
Sbjct: 3 KKRERDTRDPSRKSKKRQRVEVTGADGE----IVGIDQLDWKEVALPDRLEDAEGFFGLE 58
Query: 68 EIDEASYNLQIPKPE-------KGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKE 120
EID + I +P K K NT + SS ++D + G D G E
Sbjct: 59 EID----GVDIVRPTGNGEVKFKVSRNKVKNTAAKDISSDTKDDADEWSGISDDEGPNDE 114
Query: 121 QEKNLKNQKGK-----------------------------KKKKKKKGKKIKTVEESVTV 151
++K ++ + K + KK ++ ++
Sbjct: 115 GVDDVKEKQTQADKTEKRKEKKKKKQEKAQNKKTEKLKETKLQNNKKATPKDELQSGISF 174
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
+D EEE+ + AW L + + S+ +L F +PTPIQ ACIPA A
Sbjct: 175 EALNEDDEEEV--------DVSAWGPLDISAEIQTSLSKLKFAKPTPIQSACIPAIA--A 224
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 271
D++G A TGSGKTLAFG+PI++ LE R + E A K ALI++P
Sbjct: 225 GHDVVGKASTGSGKTLAFGIPILEYYLETRHDEPSQQHKDRESAGKDPI-----ALILSP 279
Query: 272 TRELALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELM 328
TRELA Q+ H+ + A IN R+ + GG+S +KQ+RLL A ++VVGTPGRLW+++
Sbjct: 280 TRELAHQLAKHITALCTNAPNINARIALLTGGLSVQKQQRLL-ANADIVVGTPGRLWDVI 338
Query: 329 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM--TNGSNEGQSEQTQTCV 386
S G L + F V+DEADR++ GHF+E++ I+ L + TN E + +++
Sbjct: 339 STGHGLLRRFQNIKFLVVDEADRLLSEGHFKEVEEIVTALDLKETNDGIEEPASHSESTD 398
Query: 387 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-----LNSIETLSERAGM 441
S R RQTLVFSAT F K L+ + +G S+E L ++
Sbjct: 399 DASKAPR--RQTLVFSAT------FHKGLQQKLAGKSRFFDGDLLDNKQSMEYLLKKLNF 450
Query: 442 RAN-VAIVDLTNVSVLANKLEESFIE 466
R + +D+ V+ +A L+E +E
Sbjct: 451 REDKPKFIDVNPVAQMAENLKEGLVE 476
>gi|170053020|ref|XP_001862485.1| ATP-dependent RNA helicase DDX24 [Culex quinquefasciatus]
gi|167873707|gb|EDS37090.1| ATP-dependent RNA helicase DDX24 [Culex quinquefasciatus]
Length = 817
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 153/279 (54%), Gaps = 55/279 (19%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
S ++ W EL + +++++ GF++PT IQ +PAA GK D++GAAETGSGKTLA
Sbjct: 217 SADYFKWTELGVSEPIVRALADKGFRQPTEIQTLSLPAAI-LGKRDLLGAAETGSGKTLA 275
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKY----------------APKG---------- 262
FG+P+++ +++ + G +K + E AP G
Sbjct: 276 FGIPLLEGIMKLKANGGLKTVKKSDAEESREGHELTPEPEELEFYPAPDGGDSVLAAQDL 335
Query: 263 ----------HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKA 312
L ALI+TPTRELA+Q+ DHLK V K ++++ + GG++ KQER+LK
Sbjct: 336 EREKKKDLNKPLYALILTPTRELAVQINDHLKAVTKYTDIQIATVFGGLAVVKQERMLKR 395
Query: 313 RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 372
PE+V+ TPGRLWELM G HL ++ + F V+DE DRM+E GHF EL+ +++ML
Sbjct: 396 CPEIVIATPGRLWELMQAGNHHLSKMDQIRFLVIDETDRMLEKGHFDELKQLLEML---- 451
Query: 373 GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 411
Q+E+ K R+ +FSAT+ L D
Sbjct: 452 ----NQNEEAT----------KLRRNYIFSATLTLDHDL 476
>gi|345560201|gb|EGX43326.1| hypothetical protein AOL_s00215g62 [Arthrobotrys oligospora ATCC
24927]
Length = 801
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 184/325 (56%), Gaps = 27/325 (8%)
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA--AAHQGKVDIIGA 218
E +S+ ++ + AW L L P ++++ +L F EPTPIQK IP+ A H D+IG
Sbjct: 190 EGLSDDDLEVDLPAWESLSLSPYTLQALQKLTFTEPTPIQKLSIPSIIAGH----DLIGK 245
Query: 219 AETGSGKTLAFGLPIMQRLL---EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 275
A TGSGKTLAFG+PI + L ++R K+L E+ +EA+ L ALI++PTREL
Sbjct: 246 AATGSGKTLAFGIPIFEHWLSSSKDRAVPAKLLSEEDKEADASKLTNPLSALILSPTREL 305
Query: 276 ALQVTDHLKEV--AKGINV--RVVPIVGGMSTEKQERLL--KARPELVVGTPGRLWELMS 329
A Q+T+H++ + A G+ VV + GG+S +KQ R L ++VV TPGRLWE++S
Sbjct: 306 AHQITEHIQALITASGVTSPPHVVSLTGGLSIQKQLRKLGQSGGADVVVATPGRLWEILS 365
Query: 330 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS 389
+ F V+DEADR+++ GHF+E++ I+D+L + E ++ + T+
Sbjct: 366 EKSGYTRWFRKTRFLVIDEADRVLQEGHFKEVEQILDVL-TRDAEEEDVAQNPEVYGTIK 424
Query: 390 SLQRKK---RQTLVFSATIALSADFRKKLKHGSLKLKQSVNGL----NSIETLSERAGMR 442
+ + K RQ LVFSAT S D ++KL K S +GL +S++ L ++ R
Sbjct: 425 TFKNSKPKDRQMLVFSAT--FSKDLQQKLSSKK-SWKNSNSGLLDDKDSLDYLLKKLPFR 481
Query: 443 -ANVAIVDLTNVSVLANKLEESFIE 466
+ VD+ V +A L E +E
Sbjct: 482 EEHPQWVDVNPVDQMAENLREGIVE 506
>gi|241253045|ref|XP_002403786.1| RNA helicase, putative [Ixodes scapularis]
gi|215496560|gb|EEC06200.1| RNA helicase, putative [Ixodes scapularis]
Length = 463
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 151/261 (57%), Gaps = 33/261 (12%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA 206
E T ++ P + E + + E + AW + ++K++ L F +PTPIQ +P+
Sbjct: 37 EPKTAADNPSNDETPV--QEEDQKDMSAWLNCYVPEPVLKALAELNFTQPTPIQAQTLPS 94
Query: 207 AAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 266
A + +D++GAAETGSGKTLAFG+PI+ + E++ + G P L+A
Sbjct: 95 AI-RDHMDVMGAAETGSGKTLAFGIPILHHIAEQKARIGD------------GPMS-LQA 140
Query: 267 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 326
L++TPTRELA+QV HL+ AK + VV ++GG+S +KQ RLLK RPE+VV TPGRLWE
Sbjct: 141 LVLTPTRELAIQVKQHLQSAAKYTGIGVVNVIGGLSADKQLRLLKRRPEIVVATPGRLWE 200
Query: 327 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 386
L+ HL ++ + + V+DEADRM+E GHF +L ++ + M +G
Sbjct: 201 LVDQNTPHLSDVSNVRYLVIDEADRMVEKGHFEDLTRLLAL--MNADRVDGA-------- 250
Query: 387 TVSSLQRKKRQTLVFSATIAL 407
K+RQ VFSAT+ +
Sbjct: 251 -------KRRQNFVFSATLTM 264
>gi|302659739|ref|XP_003021557.1| hypothetical protein TRV_04404 [Trichophyton verrucosum HKI 0517]
gi|291185460|gb|EFE40939.1| hypothetical protein TRV_04404 [Trichophyton verrucosum HKI 0517]
Length = 746
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 173/312 (55%), Gaps = 34/312 (10%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
E + AW+ L L P L S+ R F +PTPIQKA IP G D+IG A TGSGKT
Sbjct: 162 EADVDVSAWDSLDLRPELQTSLSRFKFAQPTPIQKATIPEIL--GGRDVIGKAATGSGKT 219
Query: 227 LAFGLPIMQRLL---EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 283
LAFGLPI+Q LL E+R L + G++ ALI++PTRELA Q+ HL
Sbjct: 220 LAFGLPILQYLLNRQEQRPSTSLTLSKSGDKKPV--------ALILSPTRELAHQLVKHL 271
Query: 284 KEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 340
KEV A ++ + + GG+S KQ+R L A +++VGTPGRLW+++S + L +L +
Sbjct: 272 KEVTSSAPNVDAYIASVTGGLSVHKQQRQL-AEADIIVGTPGRLWDMVSSTPQILTKLRS 330
Query: 341 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
+ F V+DEADR++ GHF+E+ ++ L T S+E E + + RQTLV
Sbjct: 331 IKFLVVDEADRLLSEGHFKEVGELLSALDKTRTSDEDVDEAPEEEEELGG-----RQTLV 385
Query: 401 FSATIALSADFRKKLKHGSLKLKQSV--NGLN---SIETLSERAGMR-ANVAIVDLTNVS 454
FSAT F+K L+ K S N L+ S+E L ++ + +D+ VS
Sbjct: 386 FSAT------FQKGLQQKLAKRDHSFHDNLLDKKESMEYLLKKLRFKDEKPRFIDVNPVS 439
Query: 455 VLANKLEESFIE 466
+A+ L+E IE
Sbjct: 440 QMADNLKEGIIE 451
>gi|307190840|gb|EFN74688.1| ATP-dependent RNA helicase DDX24 [Camponotus floridanus]
Length = 739
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 178/336 (52%), Gaps = 65/336 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+AW+ + + ++K++ F PT IQ +PAA G+ DI+GAAETGSGKTLAFG+
Sbjct: 134 VEAWSSMGVPTSIIKALADQNFHSPTAIQAQTLPAAI-LGRRDILGAAETGSGKTLAFGI 192
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH---------------------------- 263
PI++ +L +++ +M EE+ K+ KG
Sbjct: 193 PIIKGILHLKKQQLEM--SMSEESTKHKNKGSSSEIEARENEDISESENCVHVVNNIKLD 250
Query: 264 ---------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARP 314
L ALI+TPTRELA+Q+ +HL + AK ++++ ++GGM+ KQER+L P
Sbjct: 251 NCQNISIKPLYALILTPTRELAIQIKNHLTQAAKYTDIKIAVVLGGMAAVKQERILSKGP 310
Query: 315 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 374
E+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+EL D+L N
Sbjct: 311 EIVIATPGRLWELIQDGNSHLNQIDSIRYLAIDETDRMMEKGHFQEL---YDLLEKMNA- 366
Query: 375 NEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF-----RKKLKHGSLKLKQSVNGL 429
+ ++ +KRQT VFSAT+ + D RKK ++ K+ + G
Sbjct: 367 --------------NPVKLEKRQTFVFSATLTMVHDIPDYLERKKKRYARSKIYKLTPG- 411
Query: 430 NSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
++ + ++ N +VDLT S +A+ L E I
Sbjct: 412 QKLQKIIHLLKIK-NPKVVDLTKESGMADNLTECRI 446
>gi|156550634|ref|XP_001604682.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Nasonia
vitripennis]
Length = 636
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 181/354 (51%), Gaps = 77/354 (21%)
Query: 168 ISTEFD-AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+STE + W+ L + ++ +++ F PT IQ +P A G+ DI+GAAETGSGKT
Sbjct: 2 VSTEHNEGWSTLGVPSVITEALVEQNFYSPTAIQALALPPAI-LGRRDILGAAETGSGKT 60
Query: 227 LAFGLPIMQRLLEEREKAGKMLEE------------------------------------ 250
LAFG+P++ +LE ++K GK ++
Sbjct: 61 LAFGIPVLNGILELQKKEGKTVQSTSGKFREVNKDEEAASDISDNEGDENDEPMPEEQSI 120
Query: 251 --------------KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
K +E + P L ALI+TPTRELA+Q+ DHL + AK ++++
Sbjct: 121 DKNGIGLVKVVNNVKFDEFDNVKPTKPLYALILTPTRELAIQIKDHLTKAAKYTDIKIAV 180
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGM+ KQER+L PE+V+ TPGRLWEL+ G HL +L ++ + V+DE DRM+E G
Sbjct: 181 VVGGMAAVKQERILSKGPEIVIATPGRLWELIDEGNPHLSQLPSVKYLVIDETDRMLEKG 240
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF----- 411
HF EL II+ + N +S + K+RQT VFSAT+ L D
Sbjct: 241 HFLELHDIIERI------NSVES------------KVKRRQTFVFSATLTLVHDIPDYLQ 282
Query: 412 RKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
RKK+++ K+ + G ++ + + ++ N I+D+T + A L E I
Sbjct: 283 RKKIRNSKSKIFKLTPG-QKLQKVIDMLKVK-NPKIIDVTKDTGTARNLTECRI 334
>gi|322693567|gb|EFY85423.1| ATP-dependent RNA helicase MAK5 [Metarhizium acridum CQMa 102]
Length = 794
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 210/387 (54%), Gaps = 29/387 (7%)
Query: 97 RSSANEEDPGDGDGDEDGNGVQKE-----QEKNLKNQKGKKK-----KKKKKGKKIKTVE 146
R + + GD +G Q+E Q K K QKG+++ +KK K +K+ +
Sbjct: 122 REPVDSGEAGDSQDGLEGENSQEEISAVKQGKTSKLQKGRQQSDNGTQKKSKKQKMGDKK 181
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA-----WNELRLHPLLMKSIYRLGFKEPTPIQK 201
+ S+G + L + A+ E D W L L P L+ +I +LGF +PT IQ+
Sbjct: 182 LQKSASHGTGNEFLALAAMADEEAENDDLDMGDWVALNLSPNLVSAIAKLGFSKPTAIQE 241
Query: 202 ACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK 261
IP G D+IG A+TGSGKTLAFG+PI+++ LE RE+ ++G++ +K +
Sbjct: 242 KSIPEIIAGG--DVIGKAQTGSGKTLAFGIPIVEKWLEMREEQEDQGGDRGDQPKKKNGE 299
Query: 262 GHLRALIITPTRELALQVTDHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVG 319
G + A+I++PTRELA Q+ +H+K V G+ + + + GG+S +KQ+R L+ ++V+G
Sbjct: 300 GPM-AVILSPTRELAKQIGEHIKAVCDGLPASPYICVVTGGLSIQKQQRQLE-EADIVIG 357
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQS 379
TPGRLWE++ G K + + F V+DEADR+ + G F+E ++II L N G S
Sbjct: 358 TPGRLWEVLDGDAKLQEQFTRIKFLVVDEADRLFKVGQFKEAENIIGALDRENPEGHGYS 417
Query: 380 EQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERA 439
+ + S + ++RQTLVFSAT + + KL G K ++ + + L +
Sbjct: 418 DNSD-----SEDETRERQTLVFSAT--FDKNLQTKLA-GKGKSAKAGSDEEKMAYLMKCL 469
Query: 440 GMRANVAIVDLTNVSVLANKLEESFIE 466
R +D+ VS +A+ L E IE
Sbjct: 470 KFRGEPKFIDVNPVSQMADNLREVLIE 496
>gi|313238237|emb|CBY13329.1| unnamed protein product [Oikopleura dioica]
Length = 598
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 146/253 (57%), Gaps = 41/253 (16%)
Query: 159 EEELVSEAE--ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
EE+ +S +E + W L L+++I LGFK PT IQ+ CIP + K I+
Sbjct: 124 EEKAISNSEYVFQNKLPEWRRFNLDVALLRAIDSLGFKSPTDIQRQCIPKGLNSKKT-IL 182
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 276
GAAETGSGKT+A+GLPI+Q+++ + + E + P+ ALI+ PTRELA
Sbjct: 183 GAAETGSGKTIAYGLPILQKIIGYLDFS---------EEKTVGPQ----ALILCPTRELA 229
Query: 277 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL-KARPELVVGTPGRLWELMSGGEKHL 335
+QV D ++ V+K +V+ IVGGM+ EKQ+R+L K RPE++V TPGR WEL G+++L
Sbjct: 230 MQVHDSIRLVSKFTSVKTTAIVGGMAAEKQQRVLSKIRPEIIVATPGRFWELRETGQEYL 289
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
L ++ +FV+DEADRM E GHF EL I+ L ++
Sbjct: 290 QNLRSIKYFVVDEADRMAEKGHFAELDKIVGTLS------------------------RE 325
Query: 396 RQTLVFSATIALS 408
Q VFSAT+ L+
Sbjct: 326 SQKFVFSATLTLT 338
>gi|239611412|gb|EEQ88399.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis ER-3]
Length = 772
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 141/443 (31%), Positives = 210/443 (47%), Gaps = 88/443 (19%)
Query: 21 RKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GFLSLE 67
+KR R +R+ + + + + AD + +VG ++LD GF LE
Sbjct: 3 KKRERDTRDPSRKSKKRQRVEVTGADGE----IVGIDQLDWKEVALPDRLEDAEGFFGLE 58
Query: 68 EIDEASYNLQIPKPE-------KGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKE 120
EID + I +P K K NT + SS ++D + G D G E
Sbjct: 59 EID----GVDIVRPTGNGEVKFKVSRNKVKNTAAKDISSDTKDDADEWSGISDDEGPNDE 114
Query: 121 QEKNLKNQ-----------------------------KGKKKKKKKKGKKIKTVEESVTV 151
++K + K K + KK ++ ++
Sbjct: 115 GVDDVKEKQTQADKTEKRKEKKKKKQEKAQNKKPEKLKETKLQNNKKATPKDELQSGISF 174
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
+D EEE+ + AW L + + S+ +L F +PTPIQ ACIPA A
Sbjct: 175 EALNEDDEEEV--------DVSAWGPLDISAEIQTSLSKLKFAKPTPIQSACIPAIA--A 224
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEERE----KAGKMLEEKGEEAEKYAPKGHLRAL 267
D++G A TGSGKTLAFG+PI++ LE R + K LE G++ AL
Sbjct: 225 GHDVVGKASTGSGKTLAFGIPILEYYLETRHDEPSQQHKDLESVGKDP---------IAL 275
Query: 268 IITPTRELALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 324
I++PTRELA Q+ H+ + A IN R+ + GG+S +KQ+RLL A ++VVGTPGRL
Sbjct: 276 ILSPTRELAHQLAKHITALCTNAPNINARIALLTGGLSVQKQQRLL-ANADIVVGTPGRL 334
Query: 325 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM--TNGSNEGQSEQT 382
W+++S G L + F V+DEADR++ GHF+E++ I+ L + TN E + +
Sbjct: 335 WDVISTGHGLLRRFQNIKFLVVDEADRLLSEGHFKEVEEIVTALDLKETNDGIEEPASHS 394
Query: 383 QTCVTVSSLQRKKRQTLVFSATI 405
++ S R RQTLVFSAT
Sbjct: 395 ESTDDASKAPR--RQTLVFSATF 415
>gi|295658672|ref|XP_002789896.1| ATP-dependent RNA helicase MAK5 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282857|gb|EEH38423.1| ATP-dependent RNA helicase MAK5 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 771
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/357 (36%), Positives = 191/357 (53%), Gaps = 46/357 (12%)
Query: 125 LKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLL 184
LK KGK KK ++ S N DD E+ VS AW L + L
Sbjct: 155 LKEAKGKNNKKHAPSTDVQP-GMSFDALNEEDDQEDVDVS---------AWEPLGISAEL 204
Query: 185 MKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEERE 242
S+ +L F +PTPIQ ACIP AA H D++G A TGSGKTLAFG+PI++ LE
Sbjct: 205 QTSLAKLKFAKPTPIQSACIPEIAAGH----DVVGKASTGSGKTLAFGIPILEYHLENNR 260
Query: 243 KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGINVRVVPIVG 299
+ ++ G ++ + P ALI++PTRELA Q++ HL A IN R+ + G
Sbjct: 261 D--EPIQSTGSDSSRKNPI----ALILSPTRELAHQISKHLTAFISNAPNINARIALLTG 314
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
G+S +KQ RLL A ++V+GTPGRLW+++S G+ + + ++ F V+DEADR++ GHF+
Sbjct: 315 GLSVQKQHRLL-ANADIVIGTPGRLWDVISNGQGLIRKFQSIKFLVVDEADRLLSEGHFK 373
Query: 360 ELQSIIDMLP---MTNGSNEGQSE-QTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 415
E++ I+ L + +G E S+ +++ T S L RQTLVFSAT F + L
Sbjct: 374 EVEEILTSLDRKEINDGVEEPDSDSESERDNTKSFL----RQTLVFSAT------FHRSL 423
Query: 416 KHGSLKLKQSVNG-----LNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
+ + V+G S+E L E+ R +D+ VS +A + E +E
Sbjct: 424 QQKLAGKSRFVDGGLLDNKQSMEYLLEKLNFREEKPKFIDVNPVSQMAENIREGLVE 480
>gi|327348577|gb|EGE77434.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis ATCC
18188]
Length = 772
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 208/437 (47%), Gaps = 76/437 (17%)
Query: 21 RKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GFLSLE 67
+KR R +R+ + + + + AD + +VG ++LD GF LE
Sbjct: 3 KKRERDTRDPSRKSKKRQRVEVTGADGE----IVGIDQLDWKEVALPDRLEDAEGFFGLE 58
Query: 68 EIDEASYNLQIPKPE-------KGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKE 120
EID + I +P K K NT + SS ++D + G D G E
Sbjct: 59 EID----GVDIVRPTGNGEVKFKISRNKVKNTAAKDISSDTKDDADEWSGISDDEGPNDE 114
Query: 121 QEKNLKNQKGK-----------------------------KKKKKKKGKKIKTVEESVTV 151
++K ++ + K + KK ++ ++
Sbjct: 115 GVDDVKEKQTQADKTEKRKEKKKKKQEKAQNKKTEKLKETKLQNNKKATPKDELQSGISF 174
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
+D EEE+ + AW L + + S+ +L F +PTPIQ ACIPA A
Sbjct: 175 EALNEDDEEEV--------DVSAWGPLDISAEIQTSLSKLKFAKPTPIQSACIPAIA--A 224
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 271
D++G A TGSGKTLAFG+PI++ LE R + E A K ALI++P
Sbjct: 225 GHDVVGKASTGSGKTLAFGIPILEYYLETRHDEPSQQHKDPESAGKDPI-----ALILSP 279
Query: 272 TRELALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELM 328
TRELA Q+ H+ + A IN R+ + GG+S +KQ+RLL A ++VVGTPGRLW+++
Sbjct: 280 TRELAHQLAKHITALCTNAPNINARIALLTGGLSVQKQQRLL-ANADIVVGTPGRLWDVI 338
Query: 329 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTV 388
S G L + F V+DEADR++ GHF+E++ I+ L + ++ + + + T
Sbjct: 339 STGHGLLRRFQNIKFLVVDEADRLLSEGHFKEVEEIVTALDLKETNDGIEEPASHSESTD 398
Query: 389 SSLQRKKRQTLVFSATI 405
+ + +RQTLVFSAT
Sbjct: 399 DASKAPRRQTLVFSATF 415
>gi|453089379|gb|EMF17419.1| DEAD-domain-containing protein, partial [Mycosphaerella populorum
SO2202]
Length = 687
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 178/324 (54%), Gaps = 37/324 (11%)
Query: 158 AEEELVSEAE-ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVD 214
A LV E+E + WN L+L P M S+ +L F +PTPIQ+ IP A H D
Sbjct: 163 AFSRLVEESEDTGVDVSQWNPLKLSPDTMASLSKLRFTKPTPIQQHVIPEVLAGH----D 218
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
+IG A TGSGKTLAFG+PI++R LE ++ +KG+ G L AL+++PTRE
Sbjct: 219 VIGKASTGSGKTLAFGIPILERFLESSQQ-----RKKGKSGS-----GPL-ALLLSPTRE 267
Query: 275 LALQVTDHLKEVAKGINV---RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
LA Q+ HL + G++ + + GG+S +KQ+R+LK ++V+GTPGRLWE++ G
Sbjct: 268 LAHQLDKHLTALFSGLSTDRPSIATLTGGLSLQKQQRMLK-DADVVIGTPGRLWEVIGDG 326
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTV--- 388
L + F V+DEADR++ GHF+E++ I++ L +E S++T+ T
Sbjct: 327 HGVAASLKHIDFLVIDEADRLLSEGHFKEVEEILNALDRDEAQDE--SDETENATTPRTT 384
Query: 389 ---SSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
+S + KRQTLVFSAT AL KL H L + S+E L + R
Sbjct: 385 KSQASSRPAKRQTLVFSATFDRALQRKLVGKLSHRDNLLSNA----QSMEYLLSKLNFRE 440
Query: 444 NVA-IVDLTNVSVLANKLEESFIE 466
+D+ ++ LA L+E IE
Sbjct: 441 ETPKFIDMNPINQLATGLKEGLIE 464
>gi|393907272|gb|EFO18351.2| hypothetical protein LOAG_10144 [Loa loa]
Length = 698
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 138/240 (57%), Gaps = 34/240 (14%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ W L + ++K+I +GF EP IQ+ IP+A + + DIIGAAETGSGKTLAFG
Sbjct: 133 DMSGWINLYISNTVLKAIADMGFTEPMEIQRLVIPSAI-RDRFDIIGAAETGSGKTLAFG 191
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
+P+++RLL A + E E+ K +RALI+ PTREL +Q+ +H+ + K
Sbjct: 192 VPVVERLL-----ANQSFAESSEQ------KKSIRALILAPTRELVMQIRNHIHALLKYT 240
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH--LVELHTLSFFVLDE 348
+ +V IVGG+S +KQER+LK PE+V+ TPGRL LM+ E L + L V+DE
Sbjct: 241 SFKVASIVGGLSLQKQERILKYVPEIVIATPGRLLALMTSAEADSCLSDWSNLQCLVVDE 300
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 408
DRMIE GHF +LQ I+D++ KK QT VFSAT+ +
Sbjct: 301 TDRMIEKGHFEDLQHILDIIRKNTS--------------------KKLQTFVFSATLTYT 340
>gi|312088074|ref|XP_003145719.1| hypothetical protein LOAG_10144 [Loa loa]
Length = 699
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 138/240 (57%), Gaps = 34/240 (14%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ W L + ++K+I +GF EP IQ+ IP+A + + DIIGAAETGSGKTLAFG
Sbjct: 134 DMSGWINLYISNTVLKAIADMGFTEPMEIQRLVIPSAI-RDRFDIIGAAETGSGKTLAFG 192
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
+P+++RLL A + E E+ K +RALI+ PTREL +Q+ +H+ + K
Sbjct: 193 VPVVERLL-----ANQSFAESSEQ------KKSIRALILAPTRELVMQIRNHIHALLKYT 241
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH--LVELHTLSFFVLDE 348
+ +V IVGG+S +KQER+LK PE+V+ TPGRL LM+ E L + L V+DE
Sbjct: 242 SFKVASIVGGLSLQKQERILKYVPEIVIATPGRLLALMTSAEADSCLSDWSNLQCLVVDE 301
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 408
DRMIE GHF +LQ I+D++ KK QT VFSAT+ +
Sbjct: 302 TDRMIEKGHFEDLQHILDIIRKNTS--------------------KKLQTFVFSATLTYT 341
>gi|143345244|sp|Q0CI35.2|MAK5_ASPTN RecName: Full=ATP-dependent RNA helicase mak5
Length = 774
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 177/310 (57%), Gaps = 25/310 (8%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA--AHQGKVDIIGAAET 221
+E + + AW L L P ++ S+ +L F PT +QK+CIP H D++G A T
Sbjct: 193 AEEDDGVDISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPPILDGH----DVVGKAST 248
Query: 222 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 281
GSGKTLAFG+PI++ LE++ + K ++K E + ALI++PTRELA Q+
Sbjct: 249 GSGKTLAFGIPILEYYLEKKRRETKNKDDKKETSPI--------ALILSPTRELAHQLVK 300
Query: 282 HLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 338
H+ EV A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++SGG+ + ++
Sbjct: 301 HIGEVITHAPGVNARIALLTGGLSVQKQQRLLNG-ADIVIGTPGRVWEVLSGGQGLISKM 359
Query: 339 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQT 398
+ + V+DEADR++ GHF+E I+ L ++ +E+ ++ S Q RQT
Sbjct: 360 KEIKYLVVDEADRLLSEGHFKEAHEILAALDREEINDFPGAEEDESDDEDSKTQ---RQT 416
Query: 399 LVFSATIALSADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVL 456
LVFSAT D ++KL G +N S+E L ++ R +D+ VS +
Sbjct: 417 LVFSAT--FHRDLQQKLAGKGKWTGSDLMNKQESMEYLLKKLNFREEKPKFIDVNPVSQM 474
Query: 457 ANKLEESFIE 466
A L+E +E
Sbjct: 475 AEGLKEGIVE 484
>gi|380015023|ref|XP_003691511.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX24-like [Apis florea]
Length = 778
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 177/353 (50%), Gaps = 84/353 (23%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W L + ++K++ F +PTPIQ +PAA G DI+GAAETGSGKTLAFG+PI+
Sbjct: 146 WQILGVSTPIIKALKDQQFYQPTPIQALTLPAAI-LGHRDILGAAETGSGKTLAFGIPII 204
Query: 235 QRLLE-------------EREKAGKMLEEKG----------------------------- 252
+LE E+EK K++E KG
Sbjct: 205 NGILELKNKQCDQLNVKSEKEK-NKIIENKGWICSENKIVEIDNSSSESDYEEDIDSVNE 263
Query: 253 ----------------EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
E Y K L ALI+TPTRELA+Q+ DHL + AK +++++
Sbjct: 264 NSIGCVRVINNIKFNETNTENYMEKP-LYALILTPTRELAIQIKDHLTKAAKYVDIKIAV 322
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
++GGM+ KQER+L PE+V+ TPGRLWEL+ G HL ++ ++ + V+DE DRM+E G
Sbjct: 323 VLGGMAAVKQERILSKGPEIVIATPGRLWELIQYGNSHLCKVDSIKYLVIDETDRMLEKG 382
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF+ELQ +++ + +NE + ++RQT VFSAT+ + D + L
Sbjct: 383 HFQELQQLLEKI----NTNEK--------------RLRERQTFVFSATLTMVHDIPEYLX 424
Query: 417 HGSLKLKQSVNGL----NSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
K +S +E + E G++ N I+DLT S + L E I
Sbjct: 425 KKKRKHIKSKIKKLTPDQKLEKIMELVGIK-NPKIIDLTKKSGITANLTECRI 476
>gi|115400477|ref|XP_001215827.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191493|gb|EAU33193.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 791
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 177/310 (57%), Gaps = 25/310 (8%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA--AHQGKVDIIGAAET 221
+E + + AW L L P ++ S+ +L F PT +QK+CIP H D++G A T
Sbjct: 193 AEEDDGVDISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPPILDGH----DVVGKAST 248
Query: 222 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 281
GSGKTLAFG+PI++ LE++ + K ++K E + ALI++PTRELA Q+
Sbjct: 249 GSGKTLAFGIPILEYYLEKKRRETKNKDDKKETSPI--------ALILSPTRELAHQLVK 300
Query: 282 HLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 338
H+ EV A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++SGG+ + ++
Sbjct: 301 HIGEVITHAPGVNARIALLTGGLSVQKQQRLLNG-ADIVIGTPGRVWEVLSGGQGLISKM 359
Query: 339 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQT 398
+ + V+DEADR++ GHF+E I+ L ++ +E+ ++ S Q RQT
Sbjct: 360 KEIKYLVVDEADRLLSEGHFKEAHEILAALDREEINDFPGAEEDESDDEDSKTQ---RQT 416
Query: 399 LVFSATIALSADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVL 456
LVFSAT D ++KL G +N S+E L ++ R +D+ VS +
Sbjct: 417 LVFSAT--FHRDLQQKLAGKGKWTGSDLMNKQESMEYLLKKLNFREEKPKFIDVNPVSQM 474
Query: 457 ANKLEESFIE 466
A L+E +E
Sbjct: 475 AEGLKEGIVE 484
>gi|378731664|gb|EHY58123.1| hypothetical protein HMPREF1120_06141 [Exophiala dermatitidis
NIH/UT8656]
Length = 733
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 220/437 (50%), Gaps = 69/437 (15%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKTNTKKRKRSSA------NEEDPGD-GDGDED- 113
GF LEEI+ ++++ + E G R RS+A NEED G+ G ED
Sbjct: 57 GFYGLEEIE----DVEVVRDETGH-----QVTFRPRSAAALLDEPNEEDAGEEWQGFEDE 107
Query: 114 ---GNGVQKEQEKNLKNQKGKKKK-------KKKKGKKIKTVEESVTVSNGPDDAEEELV 163
G+ + K+ + K+ + KK K ++ ++ + PD ++
Sbjct: 108 VVKGDSRPVPESKSAAPKASKQPEQALASVSKKSKSQQEDDIDADLGFDVLPDSTDD--- 164
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
+A++S AW +L L P+ + + RLGF PTPIQKA +P QG D+IG A TGS
Sbjct: 165 GKADVS----AWKDLGLSPITLSQLSRLGFSNPTPIQKAAVPVIL-QGH-DVIGKAVTGS 218
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 283
GKTLAFG+PI + L E AG K K L ALI+ PTRELALQ+ HL
Sbjct: 219 GKTLAFGIPIFEAWLAT-ENAGFKGPAK--------TKDSLLALILAPTRELALQLNRHL 269
Query: 284 KEVAKGIN--VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH-----LV 336
E+ G+ RV + GG+S KQ+R L + ++VV TPGRLWE+M+ + L
Sbjct: 270 NELCIGLENAPRVCAVTGGLSVYKQQRQL-STADIVVATPGRLWEVMNDSATNYDTDALA 328
Query: 337 E-LHTLSFFVLDEADRMIENGHFRELQSIIDMLP---MTNGSNEGQSEQTQTCVTVSSLQ 392
E L + F V+DEADR++ GHF+E++SI+D L + + E S+++
Sbjct: 329 ERLKKIQFLVVDEADRLLSEGHFKEVESILDALDREVIDEDAPEAPSKES---------T 379
Query: 393 RKKRQTLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVD 449
+ RQTLVFSAT L K K G + + ++ S+E L + R VD
Sbjct: 380 KSHRQTLVFSATFHKGLQKKLTSKNKSGWRQSTELLDNQQSMEYLLRKLSFREEKPTFVD 439
Query: 450 LTNVSVLANKLEESFIE 466
+ S +A+ L ES +E
Sbjct: 440 VNPASQMASALSESIVE 456
>gi|339238663|ref|XP_003380886.1| ATP-dependent RNA helicase DDX24 [Trichinella spiralis]
gi|316976157|gb|EFV59493.1| ATP-dependent RNA helicase DDX24 [Trichinella spiralis]
Length = 654
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 180/346 (52%), Gaps = 45/346 (13%)
Query: 125 LKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEE-ELVSEAEIS-TEFDAWNELRLHP 182
+ ++K KK+K K K+ + + + S E E V E + + W EL +
Sbjct: 44 INDKKNTSKKRKLKNKQSRAIIDKQEASGKKSKLESFESVDENYVPGKKLKKWQELFVPE 103
Query: 183 LLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEERE 242
++ ++ L + EPTPIQ C+P A + ++DI+GAAETGSGKTLAFG+P++ LL E
Sbjct: 104 EILHALDDLEYFEPTPIQALCLPPAI-RDRLDILGAAETGSGKTLAFGIPVIAGLLSENS 162
Query: 243 KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMS 302
+ + H ALI+TPTRELA+Q+ DHL + K N+++ GG+S
Sbjct: 163 DS----------------QIHPSALILTPTRELAIQIKDHLSSIMKYTNLKLTTATGGLS 206
Query: 303 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 362
+KQ+RLLK P++V+ TPGRLW L+S + L LH + + V+DE DRM E +F E
Sbjct: 207 VQKQQRLLKDDPDIVIATPGRLWALISEDCEGLENLHKIKYLVIDEIDRMAEKQNFAEFS 266
Query: 363 SIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKL 422
+++ L NG +KRQTLVFSAT++ +L
Sbjct: 267 QLLEFL---NGDENAI---------------RKRQTLVFSATLSFVHPMPNRLLS----- 303
Query: 423 KQSVNGLN---SIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
K + L+ IE L MR ++DL++ L++ L ES +
Sbjct: 304 KANAKPLSPEEKIENLISFLSMRPKRKVIDLSSKHGLSSSLVESCL 349
>gi|340717162|ref|XP_003397056.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX24-like [Bombus terrestris]
Length = 766
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 201/407 (49%), Gaps = 88/407 (21%)
Query: 126 KNQKGKKKKKKKKGKKIKTVEESVTVSNG----PDDAEE---ELVSEAEISTEFDA--WN 176
K +K K +KK +G+K K + + ++ NG P++ ++ E + + DA W
Sbjct: 87 KAKKTKSLEKKLEGRKAKKIPKCLSPKNGLDISPNNNDQFSNECNKDKNDVYDIDAQQWY 146
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
L + ++K++ F EPTPIQ +P A G DI+GAAETGSGKTLAFG+PI+
Sbjct: 147 MLGVPTPVIKALKDQQFHEPTPIQALTLPPAI-LGHRDILGAAETGSGKTLAFGIPIING 205
Query: 237 LLEEREKA-------------------------GKMLEEKGEEAEKYAPK---------- 261
+LE + K KM+E +E +
Sbjct: 206 ILELKNKQSQQSDMEFGEEITGIIKNKGWICSENKMVENDNSSSESDYEEHIEGLNKNGI 265
Query: 262 GHLRAL------------------IITPTRELALQVTDHLKEVAKGINVRVVPIVGGMST 303
G +R + I+TPTRELA+Q+ DHL + K +++V ++GGM+
Sbjct: 266 GCVRVINNVKMSKTQNYTKPLYALILTPTRELAIQIKDHLTKAIKYTDIKVAVVLGGMAA 325
Query: 304 EKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 363
KQER+L PE+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+ELQ
Sbjct: 326 VKQERILSKGPEIVIATPGRLWELIQQGNPHLSKVDSIKYLAIDETDRMLEKGHFQELQQ 385
Query: 364 IIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF-----RKKLKHG 418
+++ + M NE + E+ RQT VFSAT+ + D + K KH
Sbjct: 386 LLEKINM----NEKKVEE--------------RQTFVFSATLTMVHDIPEYLEKXKRKHT 427
Query: 419 SLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
K+ Q + ++ + E G++ N I+D+T S A L E I
Sbjct: 428 KSKI-QKLTPAQKLQKIMELVGIK-NPKIIDVTKKSGTATNLTECRI 472
>gi|119470070|ref|XP_001258007.1| ATP dependent RNA helicase, putative [Neosartorya fischeri NRRL
181]
gi|143345269|sp|A1DMT9.1|MAK5_NEOFI RecName: Full=ATP-dependent RNA helicase mak5
gi|119406159|gb|EAW16110.1| ATP dependent RNA helicase, putative [Neosartorya fischeri NRRL
181]
Length = 777
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 183/309 (59%), Gaps = 19/309 (6%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
+E + + AW+ L L P ++ + ++ F PT +Q+ACIP +G D+IG A TGS
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFASPTSVQEACIPQIL-EGH-DVIGKASTGS 249
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 283
GKTLAFG+PI++ LE+ K + EK +++EK + ALI++PTRELA Q++ H+
Sbjct: 250 GKTLAFGIPILEHYLEK--KRDDISAEKEKKSEKDSTP---IALILSPTRELAHQLSKHI 304
Query: 284 KEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 340
E+ A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++S G+ + ++
Sbjct: 305 GELIAQAPGVNARIALLTGGLSVQKQQRLLSG-ADIVIGTPGRVWEILSTGQGLIRKMQQ 363
Query: 341 LSFFVLDEADRMIENGHFRELQSIIDMLP-MTNGSNEGQSEQTQTCVTVSSLQRKKRQTL 399
+ F V+DEADR++ GHF+E++ I++ L + +G G Q + S +RQTL
Sbjct: 364 IKFLVVDEADRLLSEGHFKEVEEILNALDRVEDGEVPGGENQASEEESDPS---SERQTL 420
Query: 400 VFSATIALSADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLA 457
VFSAT D ++KL G ++ S++ L ++ R +D+ +S +A
Sbjct: 421 VFSAT--FHRDLQQKLAGKGKWTGGDVMDKKESMDYLLQKLNFREEKPKFIDMNPISQMA 478
Query: 458 NKLEESFIE 466
+ L+E +E
Sbjct: 479 DNLKEGIVE 487
>gi|225679099|gb|EEH17383.1| ATP-dependent RNA helicase mak5 [Paracoccidioides brasiliensis
Pb03]
Length = 772
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 147/453 (32%), Positives = 226/453 (49%), Gaps = 72/453 (15%)
Query: 62 GFLSLEEIDEASYNLQIPKPE-----KGKPGKKTNTKKRKRS-SANEEDPGD-------- 107
GF LEEI+ + I +P K K K K RS S+N ED D
Sbjct: 53 GFFGLEEIE----GVDIVRPAGQGQIKFKAAKNKVKKIADRSISSNAEDEADEWSRFSDS 108
Query: 108 -GDG-------DEDGNGVQKEQEKNLK-------------NQKGKKKKKKKKGKKIKTVE 146
G G +++G +QK++ + K +K + K K+ KGK K
Sbjct: 109 AGPGQDVEYVYNDEGKQIQKDETREKKKVKKSNKDRADEPREKKRLKLKEAKGKNNKKHA 168
Query: 147 ESVTVSNGP--DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACI 204
V G D EE + + + AW L + L S+ +L F +PTPIQ ACI
Sbjct: 169 PRTDVQPGMSFDSLNEE---DDQEDVDVSAWEPLGISAELQTSLAKLKFAKPTPIQSACI 225
Query: 205 P--AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG 262
P AA H D++G A TGSGKTLAFG+PI++ LE + ++ G ++ + P
Sbjct: 226 PVIAAGH----DVVGKAPTGSGKTLAFGIPILEYHLENNRD--EPIQNTGSDSSRKHPI- 278
Query: 263 HLRALIITPTRELALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
ALI++PTRELA Q++ HL A IN R+ + GG+S +KQ RLL A ++V+G
Sbjct: 279 ---ALILSPTRELAHQISKHLTAFISNAPNINARIALLTGGLSVQKQHRLL-ANADIVIG 334
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQS 379
TPGRLW+++S G+ + + ++ F V+DEADR++ GHF+E++ I+ L ++ +
Sbjct: 335 TPGRLWDVISNGQGLIRKFQSIKFLVVDEADRLLSEGHFKEVEEILTALDRKEINDGVEE 394
Query: 380 EQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-----LNSIET 434
+ + ++++ RQTLVFSAT F + L+ + ++G S+E
Sbjct: 395 SDSDSESERANIKSFPRQTLVFSAT------FHRGLQQKLAGKSRFIDGGLLDNKQSMEY 448
Query: 435 LSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
L E+ R +D+ VS +A L+E +E
Sbjct: 449 LLEKLNFREEKPKFIDVNPVSQMAENLKEGLVE 481
>gi|317142764|ref|XP_001819080.2| ATP-dependent RNA helicase mak5 [Aspergillus oryzae RIB40]
gi|391863775|gb|EIT73074.1| RNA helicase [Aspergillus oryzae 3.042]
Length = 769
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 155/479 (32%), Positives = 238/479 (49%), Gaps = 77/479 (16%)
Query: 40 SSFSAADNDPFAFLVGSNELD-------------GGFLSLEEIDEASYNLQIPKPE---- 82
S +A D+D + +VG NEL+ GGF LEEI+ + I + E
Sbjct: 26 SDATAEDSD-WDGIVGMNELNWKEVALPDRLEDAGGFFGLEEIE----GVDIIRSEGNGE 80
Query: 83 ---KGKPGKKTNTKKR----KRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKK 135
K K GK + + + ++ +D +G GD+D V +E+ K +++ + KK
Sbjct: 81 IKFKAKAGKPKKSILKKKEPEETNTQSDDEWEGFGDDD-QAVSQEESKETQDEPNESDKK 139
Query: 136 KK-------------------KGKKIKTVE--ESVTVSNGPDDAEEELVSEAEISTEFDA 174
K K +K K VE E + +G A L E + + A
Sbjct: 140 AKVKESKNAKKEKKKNAKDARKEQKEKAVESKEDKGIKSGLSFAA--LQEEEDDGADVSA 197
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W L L P ++ I ++ F PT +QKACIP G+ D+IG A TGSGKTLAFG+PI+
Sbjct: 198 WESLGLSPEILAGISKMKFTTPTSVQKACIPPIL-DGR-DVIGKASTGSGKTLAFGIPIL 255
Query: 235 QRLLEE-REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGI 290
+ LE+ R K +K E + P AL+++PTRELA Q+ H+ EV A G+
Sbjct: 256 EYYLEKLRSKT-----QKDSEKTETTPI----ALVLSPTRELAHQLAKHIGEVVSHAPGV 306
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
N R+ + GG+S +KQ+R+L ++V+GTPGR+WE++S G + ++ + F V+DEAD
Sbjct: 307 NARIALLTGGLSLQKQQRVL-TNADIVIGTPGRVWEVLSSGHGLIRKMQAIKFLVIDEAD 365
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIALSA 409
R++ GHF+E I+ L +G+ + + L K RQTLVFSAT
Sbjct: 366 RLLSEGHFKEAHEILAALDRV---VDGEFPDESSDESDDELDPKSGRQTLVFSAT--FHR 420
Query: 410 DFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 466
D ++KL G ++ S+E L ++ R +D+ VS +A L+E +E
Sbjct: 421 DLQQKLAGKGKWTGGDIMSQKESMEYLLQKLNFREEKPRFIDVNPVSQMAENLKEGIVE 479
>gi|383856439|ref|XP_003703716.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Megachile
rotundata]
Length = 770
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 174/350 (49%), Gaps = 81/350 (23%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W L L+ ++K++ F PTPIQ +P A G DI+GAAETGSGKTLAFG+PI+
Sbjct: 146 WGRLGLYAPIIKAMKDQQFHTPTPIQALTLPPAI-MGYRDILGAAETGSGKTLAFGIPII 204
Query: 235 QRLLEEREK------------AGKMLEEKG------------------------------ 252
+LE + + G +E KG
Sbjct: 205 NGILELKNRQVDKSDIKPINGTGNNIENKGWICSDNEMKDDDSSSETDHEEDIDDVNENN 264
Query: 253 ------------EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGG 300
E E Y K L ALI+TPTRELA+Q+ DHL + AK ++++ ++GG
Sbjct: 265 IGCIRVIDKVKINEDEHYVKKP-LYALILTPTRELAIQIKDHLTKAAKYTDIKIAVLLGG 323
Query: 301 MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 360
++ KQER+L PE+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+E
Sbjct: 324 LAAVKQERILSKGPEIVIATPGRLWELIQQGNPHLNQVDSIKYLAIDETDRMLEKGHFQE 383
Query: 361 LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK---- 416
LQ +++ + ++ +R++RQ VFSAT+ + D L+
Sbjct: 384 LQQLLEK------------------ININKKKREERQNFVFSATLTMVHDIPDYLQKKKK 425
Query: 417 -HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H S K+ + G ++ + + GM+ +VD+T S A+ L E I
Sbjct: 426 KHNSSKIFKLTPG-QKLQKIIQLVGMKTP-KVVDVTRESGTASNLTECKI 473
>gi|443706484|gb|ELU02510.1| hypothetical protein CAPTEDRAFT_152919 [Capitella teleta]
Length = 608
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 170/329 (51%), Gaps = 54/329 (16%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
AW L + +M ++ F +PTPIQ +PAA + DI+GAA TGSGKTLAF +
Sbjct: 1 MSAWMNLFVPEKVMLALGEQNFVQPTPIQIESLPAAIRDRR-DIVGAAHTGSGKTLAFAI 59
Query: 232 PIMQRLLEEREKAGKMLEEK-------------------------GEEAEKYAPKGH--- 263
PI+ +++ +E A L ++ G+E + +
Sbjct: 60 PILNGIMKLKEAAENELNQQLDGEEENEDDEILDEEEPEESAESDGDEEVEEKAEAESSE 119
Query: 264 ----LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
L ALI+TPTRELA+QV +H++ AK + + +VGGMS +KQERLL+ PE+VV
Sbjct: 120 ETKPLYALILTPTRELAIQVKNHIEAAAKYTGITCMAVVGGMSVQKQERLLRRGPEIVVA 179
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQS 379
TPGRLWEL S HL ++ + F VLDEADRM+E GHF EL+ I+ + ++ NE
Sbjct: 180 TPGRLWELYSELSNHLSKMPKIRFLVLDEADRMVEKGHFEELEKILGTIN-SDAENE--- 235
Query: 380 EQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLN---SIETLS 436
K+RQT VFSAT+ + ++L K K V L+ +E L
Sbjct: 236 --------------KRRQTFVFSATLTYTHKAPERLFMQKKKKKLKVTELSIEKKLEVLM 281
Query: 437 ERAGMRANVAIVDLTNVSVLANKLEESFI 465
+ GMR I+DLT A L E+ I
Sbjct: 282 GQVGMRERPKIIDLTEKQRTAETLTEARI 310
>gi|440638151|gb|ELR08070.1| hypothetical protein GMDG_02897 [Geomyces destructans 20631-21]
Length = 741
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 177/313 (56%), Gaps = 42/313 (13%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
D+AE+E ++E W EL L ++ ++ ++GF PTPIQ+ IP D+
Sbjct: 205 DEAEDEDMTE---------WAELNLSTAMLSALAKIGFTTPTPIQQEAIPEVLSGN--DV 253
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 275
IG A TGSGKTLAFG+PI++R L++ E + E A + + ALI++PTREL
Sbjct: 254 IGKASTGSGKTLAFGIPIIERWLQDNEG------REDETATEKKTQKSATALILSPTREL 307
Query: 276 ALQVTDHLKEVAKGINVR--VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
A Q+TDHL ++ KG++ + + GG++ +KQ+R L AR ++++GTPGRLWE++S G +
Sbjct: 308 AHQLTDHLTKLCKGLSDAPFIATVTGGLAIQKQQRQL-ARADIIIGTPGRLWEVLSSGIE 366
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 393
L TL F V+DEADR++ GHF+E + II L + +E + T
Sbjct: 367 LSKSLKTLKFLVVDEADRLLTEGHFKEAEEIISKLDRHDADDEEEHVVT----------- 415
Query: 394 KKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNV 453
RQTLVFSAT+A ++KL G +L G + +E L ++ + +D+
Sbjct: 416 --RQTLVFSATLA--KGLQQKLS-GKGRL-----GDDGMEYLMKKLKFKGEPKFIDVAT- 464
Query: 454 SVLANKLEESFIE 466
S +A L+E IE
Sbjct: 465 SAMAEGLKEGVIE 477
>gi|170595141|ref|XP_001902262.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158590158|gb|EDP28893.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 668
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 154/284 (54%), Gaps = 38/284 (13%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ W L + ++K+I +GF EPT IQK IP+A + + DIIGAAETGSGKTLAFG
Sbjct: 149 DMSGWINLYISNAVLKAIADMGFTEPTEIQKLVIPSAV-RDRFDIIGAAETGSGKTLAFG 207
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
+P+++ LL A + E E+ K +RALI+ PTREL +Q+ +H+ + K
Sbjct: 208 VPVVEHLL-----ANQSFLESSEQ------KKGIRALILAPTRELVMQIRNHIDALLKYT 256
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH--LVELHTLSFFVLDE 348
+V IVGG+S +KQER+LK PE+V+ TPGRL LM+ E L + L V+DE
Sbjct: 257 PFKVASIVGGLSLQKQERILKYVPEIVIATPGRLLALMTSAEADSCLSDWSHLQCLVVDE 316
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 408
DRMIE GHF +LQ I+D L KK QT VFSAT+ +
Sbjct: 317 TDRMIEKGHFEDLQHILDTLRKNTS--------------------KKLQTFVFSATLTYT 356
Query: 409 ADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLT 451
K KHG + ++ I L E G+R I+D+T
Sbjct: 357 HPASK--KHGDVN-ADKIDTDGKISRLIEITGIRKEKHRIIDIT 397
>gi|340938992|gb|EGS19614.1| hypothetical protein CTHT_0040930 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 767
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 32/305 (10%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
E + W L L P ++ I RL F +PTPIQ IP + D+IG A TGSGKT
Sbjct: 191 EDDVDLSEWVPLGLSPPVLSCIARLKFLKPTPIQARAIPEVINGH--DVIGKAATGSGKT 248
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
LAFG+PI++ L + A E G++ H ALI++PTRELA Q+TDHLK++
Sbjct: 249 LAFGIPIVEAWLSKIASA----ESSGQK--------HPIALILSPTRELAHQITDHLKQL 296
Query: 287 AKGINV--RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
G+ + + GG++ +KQER L+ + ++VVGTPGRLWE+MS + ++SF
Sbjct: 297 CAGLATAPYICSVTGGLAVQKQERQLQ-KADIVVGTPGRLWEVMSTSNAVMQSFRSISFL 355
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
V+DEADR++++GHF+E + I+ L T G+ E+ + +S R++RQTLVFSAT
Sbjct: 356 VVDEADRILKDGHFKEAEKILLALDRT---VPGEEEENDSDDEKTS--RRRRQTLVFSAT 410
Query: 405 IALSADFRKKLKHGSLKLKQSVNGLN---SIETLSERAGMRANVAIVDLTNVSVLANKLE 461
F K L+ L K N + S+E L +R R + +D ++ +A L+
Sbjct: 411 ------FNKALQQ-KLAGKARYNLMGETESLEYLLKRLNFREHPKFIDTNPITQMAENLK 463
Query: 462 ESFIE 466
E I+
Sbjct: 464 EGLIQ 468
>gi|299742573|ref|XP_001832577.2| ATP-dependent RNA helicase MAK5 [Coprinopsis cinerea okayama7#130]
gi|298405246|gb|EAU89326.2| ATP-dependent RNA helicase MAK5 [Coprinopsis cinerea okayama7#130]
Length = 759
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 165/303 (54%), Gaps = 62/303 (20%)
Query: 155 PD-DAEEELVSEAEISTEFDA------WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA 207
PD D++E SE E FD+ W+ L LHP L +SI+ F +PT IQK IP A
Sbjct: 128 PDEDSDESADSEPE-KEPFDSETLLPEWHPLGLHPRLTRSIHARNFSKPTEIQKEAIPLA 186
Query: 208 AHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRAL 267
QG+ D++G A+TGSGKTLA+GLPI+ LL ++ + K + LRAL
Sbjct: 187 L-QGR-DVVGVAQTGSGKTLAYGLPILHTLLNQKRPSSKR-------------RRPLRAL 231
Query: 268 IITPTRELALQVTDHLKEVAKGI------------------NVRVVPIVGGMSTEKQERL 309
I+ PTRELALQV+ HL + + I +V V IVGGMS +KQ+R+
Sbjct: 232 ILAPTRELALQVSQHLTDTLRAIEPQEDEGDEKKQAVKPPPHVSVAAIVGGMSAQKQKRV 291
Query: 310 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII---- 365
L ++++ TPGRLW+++S + E+ L F VLDEADRMIE GHF EL +I+
Sbjct: 292 LDRGVDVLIATPGRLWDIVSTDDNLANEIRNLRFLVLDEADRMIETGHFAELDNILRLTL 351
Query: 366 -----DMLPMTNGSNEGQSEQTQTCVT------VSSLQR-KKRQTLVFSATIALSADFRK 413
D +P G + +SE T + SS Q+ QT VFSAT LS D ++
Sbjct: 352 RESSEDEIP---GIDNEKSEDEDTNMDDKADDKPSSAQKGTDLQTFVFSAT--LSKDLQR 406
Query: 414 KLK 416
LK
Sbjct: 407 NLK 409
>gi|238501664|ref|XP_002382066.1| ATP dependent RNA helicase, putative [Aspergillus flavus NRRL3357]
gi|220692303|gb|EED48650.1| ATP dependent RNA helicase, putative [Aspergillus flavus NRRL3357]
Length = 769
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 238/479 (49%), Gaps = 77/479 (16%)
Query: 40 SSFSAADNDPFAFLVGSNELD-------------GGFLSLEEIDEASYNLQIPKPE---- 82
S +A D+D + +VG NEL+ GGF LEEI+ + I + E
Sbjct: 26 SDATAEDSD-WDGIVGMNELNWKEVALPDRLEDAGGFFGLEEIE----GVDIIRSEGNGE 80
Query: 83 ---KGKPGKKTNTKKR----KRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKK 135
K K GK + + + ++ +D +G GD+D V +E+ K +++ + KK
Sbjct: 81 IKFKAKAGKPKKSILKKKEPEETNTQSDDEWEGFGDDD-QAVSQEESKETQDEPNESDKK 139
Query: 136 KK-------------------KGKKIKTVE--ESVTVSNGPDDAEEELVSEAEISTEFDA 174
K K +K K VE + + +G A L E + + A
Sbjct: 140 AKVKESKNAKKEKKKNAKDARKEQKEKAVESKKDKGIKSGLSFAA--LQEEEDDGADVSA 197
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W L L P ++ I ++ F PT +QKACIP G+ D+IG A TGSGKTLAFG+PI+
Sbjct: 198 WESLGLSPEILAGISKMKFTTPTSVQKACIPPIL-DGR-DVIGKASTGSGKTLAFGIPIL 255
Query: 235 QRLLEE-REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGI 290
+ LE+ R K +K E + P AL+++PTRELA Q+ H+ EV A G+
Sbjct: 256 EYYLEKLRSKT-----QKDSEKTETTPI----ALVLSPTRELAHQLAKHIGEVVSHAPGV 306
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
N R+ + GG+S +KQ+R+L ++V+GTPGR+WE++S G + ++ + F V+DEAD
Sbjct: 307 NARIALLTGGLSLQKQQRVL-TNADIVIGTPGRVWEVLSSGHGLIRKMQAIKFLVIDEAD 365
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIALSA 409
R++ GHF+E I+ L +G+ + + L K RQTLVFSAT
Sbjct: 366 RLLSEGHFKEAHEILAALDRV---VDGEFPDESSDESDDELDPKSGRQTLVFSAT--FHR 420
Query: 410 DFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 466
D ++KL G ++ S+E L ++ R +D+ VS +A L+E +E
Sbjct: 421 DLQQKLAGKGKWTGGDIMSQKESMEYLLQKLNFREEKPRFIDVNPVSQMAENLKEGIVE 479
>gi|307201303|gb|EFN81150.1| ATP-dependent RNA helicase DDX24 [Harpegnathos saltator]
Length = 640
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 149/287 (51%), Gaps = 63/287 (21%)
Query: 169 STEFD--AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
STEF+ AW+ + + +++K++ F PT IQ +PAA G DI+GAAETGSGKT
Sbjct: 11 STEFNTAAWSSMGVPSVIIKALADQNFYTPTIIQAKTLPAAL-LGYRDILGAAETGSGKT 69
Query: 227 LAFGLPIMQRLLE-EREKAGKMLEEKGEEAE----------------------------- 256
LAFG+PI++ +LE + +KA + +EK E
Sbjct: 70 LAFGIPIIKGILELKSQKAKTIADEKSTETSENEERTCHEVETEDNSTNSDSEDENLSEY 129
Query: 257 ------------KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTE 304
+ P L ALI+ PTREL +Q+ HL + K ++++ + GG++
Sbjct: 130 ENCINVIELDNCQNIPSKPLYALILAPTRELVVQIKQHLTQAVKYTDIKIAAVFGGLAAV 189
Query: 305 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 364
KQERLL PE+V+ TPGRLWEL+ G HL ++ ++ F +DE DRM+E GHF+EL I
Sbjct: 190 KQERLLNQGPEIVIATPGRLWELIQQGNPHLSQVDSIRFLAIDETDRMLEKGHFQELHDI 249
Query: 365 IDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 411
+ + V ++ KKRQT VFSAT+ + D
Sbjct: 250 LQK------------------INVDPIKLKKRQTFVFSATLTMVHDL 278
>gi|312381486|gb|EFR27227.1| hypothetical protein AND_06199 [Anopheles darlingi]
Length = 799
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 176/344 (51%), Gaps = 72/344 (20%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
+E S E+ W EL + ++K+I GFK PT IQ+ +PAA G D++GAAETGS
Sbjct: 212 AEGYSSVEYIRWIELGVSEPIVKAIAEKGFKTPTEIQEKSLPAAIF-GHRDLLGAAETGS 270
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYA------------------------ 259
GKTLAFGLP+++ + + ++ ++ + +E+E
Sbjct: 271 GKTLAFGLPMLEGIRKLKQLNEPIIYDNEDESETVHSDHELTPPPEDYELSPEDQKVFAM 330
Query: 260 ----------PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERL 309
P L LI+TPTRELALQ+ DHLK V K ++ + + KQER+
Sbjct: 331 GSSKKKQPMDPTKPLYGLILTPTRELALQINDHLKSVTKYTDINIATVFAV----KQERM 386
Query: 310 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
L+ PE+V+ TPGRLWEL+ G +HL ++ + F V+DE DRM+E GHF EL+ +++++
Sbjct: 387 LRKCPEIVIATPGRLWELIQAGNQHLAKVMHIRFLVIDETDRMLERGHFEELKQLLELI- 445
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLK------ 423
N + E +KKR+ +FSAT+ + D + LK K K
Sbjct: 446 --NTNEEA---------------KKKRRNYIFSATLTMDHDLPEHLKKNPKKAKKVMKET 488
Query: 424 --QSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
Q +N L I+T+ GM N IVDLT A L ES I
Sbjct: 489 PGQRLNNL--IQTI----GM-TNPKIVDLTKEQATAQTLTESRI 525
>gi|226288117|gb|EEH43630.1| ATP-dependent RNA helicase MAK5 [Paracoccidioides brasiliensis
Pb18]
Length = 772
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 223/460 (48%), Gaps = 86/460 (18%)
Query: 62 GFLSLEEIDEASYNLQIPKPE-----KGKPGKKTNTKKRKRS-SANEEDPGD-------- 107
GF LEEI+ + I +P K K K K RS S+N ED D
Sbjct: 53 GFFGLEEIE----GVDIVRPAGQGQIKFKAAKNKVKKTADRSISSNAEDEADEWSRFSDS 108
Query: 108 -GDG-------DEDGNGVQKEQEK----------------------NLKNQKGKKKKKKK 137
G G +++G +QK++ + LK KGK KK
Sbjct: 109 AGPGQDVEDVYNDEGKQIQKDETREKKKVKKSNKDRADEPREKKRLKLKEAKGKNNKKHA 168
Query: 138 KGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPT 197
++ S N DD E+ VS AW L + L S+ +L F +PT
Sbjct: 169 PRTDVQP-GMSFDALNEEDDQEDVDVS---------AWEPLGISAELQTSLAKLKFAKPT 218
Query: 198 PIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEA 255
PIQ ACIP AA H D++G A TGSGKTLAF +PI++ LE + ++ G ++
Sbjct: 219 PIQSACIPVIAAGH----DVVGKAPTGSGKTLAFVIPILEYHLENNRD--EPIQNTGSDS 272
Query: 256 EKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKA 312
+ P ALI++PTRELA Q++ HL A IN R+ + GG+S +KQ RLL A
Sbjct: 273 SRKHPI----ALILSPTRELAHQISKHLTAFISNAPNINARIALLTGGLSVQKQHRLL-A 327
Query: 313 RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 372
++V+GTPGRLW+++S G+ + + ++ F V+DEADR++ GHF+E++ I+ L
Sbjct: 328 NADIVIGTPGRLWDVISNGQGLIRKFQSIKFLVVDEADRLLSEGHFKEVEEILTALDRKE 387
Query: 373 GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG---- 428
++ + + + ++++ RQTLVFSAT F + L+ + ++G
Sbjct: 388 INDGVEESDSDSESERANIKSFPRQTLVFSAT------FHRGLQQKLAGKSRFIDGGLLD 441
Query: 429 -LNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
S+E L E+ R +D+ VS +A L+E +E
Sbjct: 442 NKESMEYLLEKLNFREEKPKFIDVNPVSQMAENLKEGLVE 481
>gi|296813881|ref|XP_002847278.1| ATP-dependent RNA helicase MAK5 [Arthroderma otae CBS 113480]
gi|238842534|gb|EEQ32196.1| ATP-dependent RNA helicase MAK5 [Arthroderma otae CBS 113480]
Length = 749
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 172/303 (56%), Gaps = 32/303 (10%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
AW+ L L P L S+ RL F +PTPIQ A IP G+ D+IG A TGSGKTLAFGLPI
Sbjct: 174 AWDGLDLRPELQTSLSRLKFSKPTPIQTAAIPDIL-AGR-DVIGKAATGSGKTLAFGLPI 231
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGI 290
+Q LL K G+ + + +K ALI++PTRELA Q+ HLKEV A +
Sbjct: 232 LQYLLNNNNKHGQGGIKSSSKEKKPI------ALILSPTRELAHQLVKHLKEVTSSAPNV 285
Query: 291 NVRVVPIVGGMSTEKQER-LLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
+ + + GG+S KQ+R LL A +++VGTPGRLW+++S K L +L + F V+DEA
Sbjct: 286 DAYIASVTGGLSMHKQQRQLLDA--DIIVGTPGRLWDMVSSTPKILTKLRGIKFLVVDEA 343
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 409
DR++ GHF+EL ++ L S++ + + V +RQTLVFSAT
Sbjct: 344 DRLLSEGHFKELGELLSALDKAKTSDDVHGNEDEEDEPV------ERQTLVFSAT----- 392
Query: 410 DFRKKLKHGSLKLKQSV--NGLN---SIETLSERAGMRANVA-IVDLTNVSVLANKLEES 463
F+K L+ K +S N L+ S+E L ++ + VD+ VS +A+ L+E
Sbjct: 393 -FQKGLQQKLAKRDKSFHDNLLDKKESMEYLLKKLNFKDEKPRFVDVNPVSQMADNLKEG 451
Query: 464 FIE 466
IE
Sbjct: 452 IIE 454
>gi|121699618|ref|XP_001268081.1| ATP dependent RNA helicase, putative [Aspergillus clavatus NRRL 1]
gi|143345189|sp|A1CTL8.1|MAK5_ASPCL RecName: Full=ATP-dependent RNA helicase mak5
gi|119396223|gb|EAW06655.1| ATP dependent RNA helicase, putative [Aspergillus clavatus NRRL 1]
Length = 774
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 175/311 (56%), Gaps = 23/311 (7%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA--AHQGKVDIIGAAET 221
+E + + AW+ L L L+ I ++ F PT +Q ACIP H D++G A T
Sbjct: 189 AEEDDGVDVSAWDALNLSTELLTGISKMKFTSPTAVQAACIPHILDGH----DVVGKAST 244
Query: 222 GSGKTLAFGLPIMQRLLEE-REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVT 280
GSGKTLAFG+PI++ LE+ R+ G ++ +K + + P ALI++PTRELA Q+
Sbjct: 245 GSGKTLAFGIPILEHYLEKNRDGHGDIIGKK--DKKDSTPI----ALILSPTRELAHQLA 298
Query: 281 DHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 337
H+ E+ A G+N R+ + GG+S +KQ+RLL A ++V+GTPGR+WE+MS G+ + +
Sbjct: 299 KHIGELVTQAPGVNARIALLTGGLSVQKQQRLL-AGADIVIGTPGRVWEIMSTGQGLIRK 357
Query: 338 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 397
+ + F V+DEADR++ GHF+E++ II L + ++ S R +RQ
Sbjct: 358 MQKIKFLVVDEADRLLSEGHFKEVEEIIGALDRVEDGD--VLDEEDEAPEEESDPRSERQ 415
Query: 398 TLVFSATIALSADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSV 455
TLVFSAT D ++KL G +N S++ L ++ R +D VS
Sbjct: 416 TLVFSAT--FHRDLQQKLAGKGKWTGGDIMNKKESMDYLLQKLNFREEKPKFIDTNPVSQ 473
Query: 456 LANKLEESFIE 466
+A L+E +E
Sbjct: 474 MAENLKEGIVE 484
>gi|145244675|ref|XP_001394643.1| ATP-dependent RNA helicase mak5 [Aspergillus niger CBS 513.88]
gi|143345221|sp|A2QWW0.1|MAK5_ASPNC RecName: Full=ATP-dependent RNA helicase mak5
gi|134079333|emb|CAK96962.1| unnamed protein product [Aspergillus niger]
gi|350631401|gb|EHA19772.1| hypothetical protein ASPNIDRAFT_178721 [Aspergillus niger ATCC
1015]
Length = 766
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 174/303 (57%), Gaps = 29/303 (9%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA--AHQGKVDIIGAAETGSGKTLAFGL 231
AW L L P ++ S+ ++ F PT +QK+CIP H D+IG A TGSGKTLAFG+
Sbjct: 193 AWESLGLSPEILTSLSKMKFTTPTLVQKSCIPQILDGH----DVIGKASTGSGKTLAFGI 248
Query: 232 PIMQRLLEERE---KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA- 287
PI++ LE+R +AGK EEK ++ AP ALI++PTRELA Q+ H+ E+A
Sbjct: 249 PILEHYLEKRRQDLRAGK--EEKKKDT---API----ALIMSPTRELAHQLAKHIGELAL 299
Query: 288 --KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
G N R+ + GG+S +KQ+R+L A ++V+GTPGR+WE++S G+ + ++ + F V
Sbjct: 300 HAPGSNARIALLTGGLSVQKQQRVL-AGADIVIGTPGRVWEVLSSGQGLIRKMSEIKFLV 358
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+DEADR++ GHF+E + I+ L N G E + R +RQTLVFSAT
Sbjct: 359 IDEADRLLSEGHFKEAEEILGALDRVEEGNFGGEESEDEEKEDA---RSERQTLVFSAT- 414
Query: 406 ALSADFRKKLKHGSLKLKQSV-NGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEES 463
D ++KL + + + S+E L ++ R +D+ VS +A L+E
Sbjct: 415 -FHRDLQQKLAGKARWTGGDIMSNKESMEYLLQKLKFREEKPKFIDVNPVSQMAEGLKEG 473
Query: 464 FIE 466
+E
Sbjct: 474 IVE 476
>gi|212529054|ref|XP_002144684.1| ATP dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
gi|210074082|gb|EEA28169.1| ATP dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
Length = 770
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 160/505 (31%), Positives = 245/505 (48%), Gaps = 94/505 (18%)
Query: 22 KRTRKSR----EAEKLNSLKWNSSFSAADNDPFAFLVGSNELD-------------GGFL 64
KR R+SR +A K L+ N+ D D A +VG ++LD GGF
Sbjct: 4 KRGRESRNLAKKAAKKQRLEENT-----DQDGDA-IVGLDDLDWQTVQLPDRLDDMGGFF 57
Query: 65 SLEEIDEASYNLQIPKPEKG----------KPGK----KTNTKKRKRSSANEEDPGDGDG 110
LEEID + I +PE KP K KT T + EE G D
Sbjct: 58 GLEEID----GVDIIRPESSGQIKFKVAADKPTKSILKKTKTTNETPNENTEEWSGFSDA 113
Query: 111 DEDGNGVQKEQEKNLKNQKGKKKK----------KKKKGKKIKTVEESVTVSNGPDDAEE 160
++ K+Q++N K+++ K+K K+++ KIK + S + + P A
Sbjct: 114 EKQEVKPHKKQKQNKKSEQQKEKSTTDEKKPAATKQQQQPKIKADKSSEKIQSLPFTA-- 171
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGA 218
L E E + AW L L P L I +L F P+ IQ+A IP A H D++G
Sbjct: 172 -LEEEEEDEIDVSAWEALGLSPALQTGISKLKFSTPSTIQQAVIPEVLAGH----DVVGK 226
Query: 219 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQ 278
A TGSGKTLAFG+PI++ L + + E K ++ ++ P ALI++PTRELA Q
Sbjct: 227 ASTGSGKTLAFGIPILEYYLNTKGQRDTSKENKKKKKKESQPI----ALILSPTRELAHQ 282
Query: 279 VTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
+ H+ + N R+ + GG++ +KQ+RLL ++V+GTPGR+WE++S G +
Sbjct: 283 LAKHIGALNTHTPAANARIALLTGGLAIQKQQRLLN-DADIVIGTPGRVWEILSSGTGLI 341
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT--------NGSNEGQSEQTQTCVT 387
+ + + VLDEADR++ +GH++EL+ I+D L N SN + ++ + +
Sbjct: 342 QRMSGVKYLVLDEADRLLSDGHYKELEEILDALDRKEDNDEADENSSNSEEEDEQKAEAS 401
Query: 388 VSSLQRKKRQTLVFSATIALSADFRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMR 442
+ RQTLVFSAT F K L+ G +N S+E L ++ R
Sbjct: 402 AA------RQTLVFSAT------FHKGLQQKLSGKGKFMSSDLMNKTESMEYLLQKLKFR 449
Query: 443 -ANVAIVDLTNVSVLANKLEESFIE 466
+D+ +S +A L+E +E
Sbjct: 450 EEKPKFIDVNPISQMAQGLKEGILE 474
>gi|258575119|ref|XP_002541741.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902007|gb|EEP76408.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 777
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 171/316 (54%), Gaps = 25/316 (7%)
Query: 162 LVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAET 221
L E E T+ AW+ L L L S+ RL F PTPIQ ACIPA QG D+IG A T
Sbjct: 176 LQDEVEEDTDVSAWDPLGLRAELQTSLARLKFCSPTPIQSACIPAVL-QGH-DVIGKAST 233
Query: 222 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEK-YAPKGHLRALIITPTRELALQVT 280
GSGKTLAFG+PI++ L R G+ E+ AP ALI++PTRELA Q+
Sbjct: 234 GSGKTLAFGIPIVEHYLG-RYPTGQAPASSNEDGTSGKAPI----ALILSPTRELAHQLN 288
Query: 281 DHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 337
HL ++ A + R+ + GG+S KQ+RLL A ++++ TPGRLWE++ L +
Sbjct: 289 KHLTDLISNAPHTSARIASVTGGLSIYKQQRLL-ADADIIIATPGRLWEVIGSMPGFLTK 347
Query: 338 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEG-QSEQTQTCVTVSSLQRKKR 396
L + F V+DEADR++ GHF+E + I++ L + EG + ++++R
Sbjct: 348 LKRIKFLVIDEADRLLSEGHFKEAEEIVNALDRVEKTEEGYEEGSEPGSPEEEEEEQRQR 407
Query: 397 QTLVFSATIALSADFRKKLKH---GSLKLKQS--VNGLNSIETLSERAGMR-ANVAIVDL 450
QTLVFSAT F K L+ G ++ + ++ S+E L + R +D+
Sbjct: 408 QTLVFSAT------FHKGLQQKLSGKIRYRNDDLLDKKESMEYLLRKLNFREERPKFIDV 461
Query: 451 TNVSVLANKLEESFIE 466
+S +A L+E ++
Sbjct: 462 NPISQMAENLKEGLVQ 477
>gi|336388501|gb|EGO29645.1| ATP-dependent RNA helicase [Serpula lacrymans var. lacrymans S7.9]
Length = 754
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/389 (33%), Positives = 193/389 (49%), Gaps = 77/389 (19%)
Query: 134 KKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEI---STEFDA------WNELRLHPLL 184
K KKGK +E S + P+D E + S ++ S FD+ W+ LHP L
Sbjct: 85 KTDKKGKH-DDIENS---PDTPEDIEAGIESTTDVPLSSISFDSKLLLPNWHSYSLHPHL 140
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEE-REK 243
++ ++ GF PTPIQ +P A +G+ DI+G AETGSGKTLA+GLPI+ LL R
Sbjct: 141 LQILHHQGFTTPTPIQSKSLPKAM-EGR-DIVGVAETGSGKTLAYGLPILHHLLSRSRHP 198
Query: 244 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN------------ 291
+ K+ K ++AL++ PTRELALQV+DHL A+ I
Sbjct: 199 SSKV-------------KRQVQALVLAPTRELALQVSDHLNMFARSIEAPIKEETLDVEL 245
Query: 292 ----------------------------VRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
V + IVGGMS +KQ R++ ++++ TPGR
Sbjct: 246 SETQQLKDKSKGKNVVSGTAKTFSKPPLVSIAAIVGGMSAQKQRRIIDRGVDILIATPGR 305
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN--EGQSEQ 381
LW+++ + +L +L + +LDEADRM+ENGHF EL +I+ + + + E + E
Sbjct: 306 LWDILEEDDSLAKQLASLRYLILDEADRMVENGHFAELDNILRLTLRLSREDVIEPEFET 365
Query: 382 TQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS---LKLKQSVNGLNSIETLSER 438
T V + QT VFSAT LS D ++ LK G + K +++E L R
Sbjct: 366 QDTEVQAHAETEDALQTFVFSAT--LSKDLQRDLKKGYRPRIGKKGRSKPASTLEDLVLR 423
Query: 439 AGMR-ANVAIVDLTNVSVLANKLEESFIE 466
R AN ++D++ + + L+ES IE
Sbjct: 424 LDFRDANPEVIDISPEGGVVSGLQESKIE 452
>gi|327259240|ref|XP_003214446.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Anolis
carolinensis]
Length = 799
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 171/350 (48%), Gaps = 80/350 (22%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
AW L + +++++ LGF PTPIQ +P+A + +D++GAAETGSGKTLAF +
Sbjct: 189 ISAWKGLFVPKPVLQALSELGFSAPTPIQALALPSAI-RDSMDVLGAAETGSGKTLAFAI 247
Query: 232 PIMQRLLEEREKAGK------MLEEKGEEAEKYA-------------------------- 259
P++ +L+ + G LE+ G+ E+ +
Sbjct: 248 PMIHSILQWYKSRGLPKGSKIQLEDGGDSEEELSKEEASEDIGGLSSAEANCAAISSVES 307
Query: 260 --------------PK--------GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
PK L L++TPTRELA+QV H+ V + ++ +
Sbjct: 308 LVTLCEKASEDGDHPKHDTVGERSNPLLGLVLTPTRELAVQVKHHIDAVTRYTGIKTANL 367
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGGM+ +KQ+R+LK +PE+V+ TPGRLWEL+ + HL L L V+DEADRM+E GH
Sbjct: 368 VGGMAPQKQQRILKRKPEIVIATPGRLWELIQEKQPHLSSLKQLRCLVIDEADRMVEKGH 427
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL--SADFRKKL 415
F EL +++ML SS KRQT VFSAT+ L A R
Sbjct: 428 FLELSQLLEMLN-------------------SSQYNPKRQTFVFSATLTLIHQAPARVFQ 468
Query: 416 KHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
K ++++ + +E L ++ GM++ ++DLT L E+ I
Sbjct: 469 KKNAIRIDKKTK----LELLMQKVGMKSKPKVIDLTRKEATVETLTETRI 514
>gi|363734223|ref|XP_421338.3| PREDICTED: ATP-dependent RNA helicase DDX24 [Gallus gallus]
Length = 809
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 172/363 (47%), Gaps = 79/363 (21%)
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAA 219
E L + + + AW +L + ++K++ LGF PTPIQ +P+A + +DI+GAA
Sbjct: 190 EVLSTSTDHKADVSAWKDLFVPQPVLKALSSLGFSAPTPIQALTLPSAI-RDNMDILGAA 248
Query: 220 ETGSGKTLAFGLPIMQRLLE-------------------------------EREKAG-KM 247
ETGSGKTLAF +P++ +LE E EK +
Sbjct: 249 ETGSGKTLAFAIPMIHSVLEWQKSNSSASVSDSVSKKPYQHHDEMRWENDDEAEKPNHQQ 308
Query: 248 LEEKGEEAEKYAPKGHLRA-------------------------LIITPTRELALQVTDH 282
+E+ G+E + G ++ L++TPTRELA+QV H
Sbjct: 309 VEDSGDEDDASFATGCVKVQENTEYDSSNKEHTVGLHKKRPLLGLVLTPTRELAVQVKHH 368
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
+ VAK ++ +VGGM+ +KQER+L +PE+V+ TPGRLWEL+ HL L L
Sbjct: 369 IDAVAKFTGIKTAILVGGMAAQKQERVLNRKPEIVIATPGRLWELIKERHPHLSNLRQLR 428
Query: 343 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 402
V+DEADRM+E GHF EL ++++L N+ Q KRQT VFS
Sbjct: 429 CLVIDEADRMVERGHFLELSQLLEVL------NDSQYN-------------PKRQTFVFS 469
Query: 403 ATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEE 462
AT+ L ++ K +E L E+ G++ ++DLT L E
Sbjct: 470 ATLTLVHQTPARILQKKNAKKIDKK--TKLEMLMEKVGIKGKPKVIDLTRKEATVETLME 527
Query: 463 SFI 465
+ I
Sbjct: 528 TRI 530
>gi|315040650|ref|XP_003169702.1| ATP-dependent RNA helicase MAK5 [Arthroderma gypseum CBS 118893]
gi|311345664|gb|EFR04867.1| ATP-dependent RNA helicase MAK5 [Arthroderma gypseum CBS 118893]
Length = 743
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 176/315 (55%), Gaps = 30/315 (9%)
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAE 220
E V EA++ + AW+ L L L S+ RL F +PTPIQKA IP G+ D+IG A
Sbjct: 155 EAVEEADV--DVSAWDTLDLRSELQTSLSRLKFAQPTPIQKAAIPEIL-AGR-DVIGKAA 210
Query: 221 TGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVT 280
TGSGKTLAFGLPI+Q LL+ +E+ + K ALI++PTRELA Q+
Sbjct: 211 TGSGKTLAFGLPILQYLLDRQEQHPSTPSTSSKSHGKTP-----TALILSPTRELAHQLV 265
Query: 281 DHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 337
HLKEV A ++ + I GG+S KQ+R L A +++VGTPGRLW+++S K L +
Sbjct: 266 KHLKEVTSSAPNVDAYIASITGGLSVHKQQRQL-AEADVIVGTPGRLWDMVSSTPKILTK 324
Query: 338 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 397
L + F V+DEADR++ GHF+E+ ++ L S+E + ++ +RQ
Sbjct: 325 LRLIKFLVVDEADRLLSEGHFKEVGELLSALDKARTSDEDIDDDSEEEDETV-----ERQ 379
Query: 398 TLVFSATIALSADFRKKLKHGSLKLKQSV--NGLN---SIETLSERAGMR-ANVAIVDLT 451
TLVFSAT F+K L+ K S N L+ S+E L ++ R +D+
Sbjct: 380 TLVFSAT------FQKGLQQKLAKRDNSFHDNLLDKKESMEYLLKKLRFRDEKPRFIDVN 433
Query: 452 NVSVLANKLEESFIE 466
+S +A+ L+E IE
Sbjct: 434 PISQMADNLKEGIIE 448
>gi|91207158|sp|Q4WMS3.2|MAK5_ASPFU RecName: Full=ATP-dependent RNA helicase mak5
Length = 777
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 176/309 (56%), Gaps = 19/309 (6%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
+E + + AW+ L L P ++ + ++ F PT +Q+ACIP +G D+IG A TGS
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQIL-EGH-DVIGKASTGS 249
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 283
GKTLAFG+PI++ LE++ +E+ E + ALI++PTRELA Q++ H+
Sbjct: 250 GKTLAFGIPILEHYLEKKRDDISAQKEQMSEKDSTPI-----ALILSPTRELAHQLSKHI 304
Query: 284 KEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 340
E+ A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++S G+ + ++
Sbjct: 305 GELIAQAPGVNARIALLTGGLSVQKQQRLLSG-ADIVIGTPGRVWEILSTGQGLIRKMQQ 363
Query: 341 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
+ F V+DEADR++ GHF+E++ I++ L E S +RQTLV
Sbjct: 364 IKFLVVDEADRLLSEGHFKEVEEILNSLDRVEDGEVPDGE--DQASEEESDPSSERQTLV 421
Query: 401 FSATIALSADFRKKLKHGSLKLKQS--VNGLNSIETLSERAGMR-ANVAIVDLTNVSVLA 457
FSAT D ++KL G K + ++ S++ L ++ R +D+ +S +A
Sbjct: 422 FSAT--FHRDLQQKLA-GKRKWTRGDIMDKKESMDYLLQKLNFREEKPKFIDMNPISQMA 478
Query: 458 NKLEESFIE 466
+ L+E +E
Sbjct: 479 DNLKEGIVE 487
>gi|452848186|gb|EME50118.1| hypothetical protein DOTSEDRAFT_165107 [Dothistroma septosporum
NZE10]
Length = 743
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 212/418 (50%), Gaps = 44/418 (10%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKTNTKKRKRS----SANEEDPGDGDGDEDGNGV 117
GF LEEI+ ++ + + E G + + + AN E+ G ED G
Sbjct: 49 GFFGLEEIE----DVDVVRHESGTIAFHSKVASSQDAEDSNGANGEEKDSWSGFEDDAGD 104
Query: 118 QKEQEKNLKNQKGKKKKKKK-KGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWN 176
K++K K K++ K K K K + + S E+ EAE S + AW
Sbjct: 105 DAPLAKSVKVTKAKQESKSKTKSKPADKAGKETSTSGVFSGLAEDAGDEAE-SVDVSAWR 163
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
L+L P M S+ +L F +PTP+Q+A IP + D++G A TGSGKT AFG+PI++R
Sbjct: 164 SLKLSPDTMASLSKLKFSKPTPVQQAVIPEVLNGH--DVVGKASTGSGKTFAFGIPILER 221
Query: 237 LLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI---NVR 293
LE + K + E AP ALI++PTRELA Q+ HL + +
Sbjct: 222 YLEAAAR-------KSRKGEGKAP----LALILSPTRELAHQLDHHLTALFSEVLSSKPS 270
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ + GG+S KQ+RLL+ ++++GTPGRLWE++S G+ L + F V+DEADR++
Sbjct: 271 IATLTGGLSLLKQQRLLR-DADVLIGTPGRLWEIISSGQGIGAALKQIEFLVVDEADRLL 329
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 413
G+F+E++ I++ L T+ ++E + E + S RQTLVFSAT F +
Sbjct: 330 SQGNFKEVEDILNTLDRTD-TDEDKKETNNSGPDSHS-----RQTLVFSAT------FDR 377
Query: 414 KLKH---GSLKLKQSVNGLN-SIETLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 466
L++ G+ K K + G ++E L + R +D+ +A L+E +E
Sbjct: 378 GLQNKLVGNFKYKDDLLGTKETLEYLLSKLNFREKPPKFIDMNPTKQMATGLKEGMVE 435
>gi|159124341|gb|EDP49459.1| ATP dependent RNA helicase, putative [Aspergillus fumigatus A1163]
Length = 795
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 176/309 (56%), Gaps = 19/309 (6%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
+E + + AW+ L L P ++ + ++ F PT +Q+ACIP +G D+IG A TGS
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQIL-EGH-DVIGKASTGS 249
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 283
GKTLAFG+PI++ LE++ +E+ E + ALI++PTRELA Q++ H+
Sbjct: 250 GKTLAFGIPILEHYLEKKRDDISAQKEQMSEKDSTPI-----ALILSPTRELAHQLSKHI 304
Query: 284 KEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 340
E+ A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++S G+ + ++
Sbjct: 305 GELIAQAPGVNARIALLTGGLSVQKQQRLLSG-ADIVIGTPGRVWEILSTGQGLIRKMQQ 363
Query: 341 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
+ F V+DEADR++ GHF+E++ I++ L E S +RQTLV
Sbjct: 364 IKFLVVDEADRLLSEGHFKEVEQILNSLDRVEDGEVPDGE--DQASEEESDPSSERQTLV 421
Query: 401 FSATIALSADFRKKLKHGSLKLKQS--VNGLNSIETLSERAGMR-ANVAIVDLTNVSVLA 457
FSAT D ++KL G K + ++ S++ L ++ R +D+ +S +A
Sbjct: 422 FSAT--FHRDLQQKLA-GKRKWTRGDIMDKKESMDYLLQKLNFREEKPKFIDMNPISQMA 478
Query: 458 NKLEESFIE 466
+ L+E +E
Sbjct: 479 DNLKEGIVE 487
>gi|350407757|ref|XP_003488184.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Bombus impatiens]
Length = 757
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 190/393 (48%), Gaps = 73/393 (18%)
Query: 126 KNQKGKKKKKKKKGKKIKTVEESVTVSNGPD-------DAEEELVSEAEISTEFDA--WN 176
K +K K +KK +G K + + ++ NG D + + + DA W
Sbjct: 87 KAKKTKSPEKKLEGGNAKKIPKCLSSKNGLDIGPNNNNQFSNDCNKDKNDVYDIDAQRWY 146
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
L + ++K++ F EPT IQ +P A G DI+GAAETGSGKTLAFG+PI+
Sbjct: 147 MLGVPTPVIKALKDQQFHEPTAIQALTLPPAI-LGHRDILGAAETGSGKTLAFGIPIING 205
Query: 237 LLEEREKAGK-------------------------MLEEKGEEAEKYAP----------- 260
+LE + K + M+E +E
Sbjct: 206 ILELKNKQSQQSDMEFGKEITGITKNKGWICSENEMVENDNSSSESDCCVRVINNVKMSK 265
Query: 261 ----KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 316
L ALI+TPTRELA+Q+ DHL + K +++V ++GGM+ KQER+L PE+
Sbjct: 266 TQNYTKPLYALILTPTRELAIQIKDHLTKAVKYTDIKVAVVLGGMAAVKQERILSKGPEI 325
Query: 317 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 376
V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+ELQ +++ + M NE
Sbjct: 326 VIATPGRLWELIQQGNPHLSKVDSIKYLAIDETDRMLEKGHFQELQQLLEKINM----NE 381
Query: 377 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLK----QSVNGLNSI 432
+ E+ RQT VFSAT+ + D + L+ K Q + +
Sbjct: 382 KKMEE--------------RQTFVFSATLTMVHDIPEYLEKKKRKHTKSKIQKLTPAQKL 427
Query: 433 ETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
+ + E G++ N I+D+T S A L E I
Sbjct: 428 QKIMELVGIK-NPKIIDVTKKSGTATNLTECRI 459
>gi|70991861|ref|XP_750779.1| ATP dependent RNA helicase [Aspergillus fumigatus Af293]
gi|66848412|gb|EAL88741.1| ATP dependent RNA helicase, putative [Aspergillus fumigatus Af293]
Length = 795
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 176/309 (56%), Gaps = 19/309 (6%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
+E + + AW+ L L P ++ + ++ F PT +Q+ACIP +G D+IG A TGS
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQIL-EGH-DVIGKASTGS 249
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 283
GKTLAFG+PI++ LE++ +E+ E + ALI++PTRELA Q++ H+
Sbjct: 250 GKTLAFGIPILEHYLEKKRDDISAQKEQMSEKDSTPI-----ALILSPTRELAHQLSKHI 304
Query: 284 KEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 340
E+ A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++S G+ + ++
Sbjct: 305 GELIAQAPGVNARIALLTGGLSVQKQQRLLSG-ADIVIGTPGRVWEILSTGQGLIRKMQQ 363
Query: 341 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
+ F V+DEADR++ GHF+E++ I++ L E S +RQTLV
Sbjct: 364 IKFLVVDEADRLLSEGHFKEVEEILNSLDRVEDGEVPDGE--DQASEEESDPSSERQTLV 421
Query: 401 FSATIALSADFRKKLKHGSLKLKQS--VNGLNSIETLSERAGMR-ANVAIVDLTNVSVLA 457
FSAT D ++KL G K + ++ S++ L ++ R +D+ +S +A
Sbjct: 422 FSAT--FHRDLQQKLA-GKRKWTRGDIMDKKESMDYLLQKLNFREEKPKFIDMNPISQMA 478
Query: 458 NKLEESFIE 466
+ L+E +E
Sbjct: 479 DNLKEGIVE 487
>gi|302407546|ref|XP_003001608.1| ATP-dependent RNA helicase MAK5 [Verticillium albo-atrum VaMs.102]
gi|261359329|gb|EEY21757.1| ATP-dependent RNA helicase MAK5 [Verticillium albo-atrum VaMs.102]
Length = 787
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 175/334 (52%), Gaps = 39/334 (11%)
Query: 140 KKIKTVEESV--TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPT 197
KK +E +V T+ DD E+ +SE W L L P + +I RL F +PT
Sbjct: 198 KKDAALESNVFSTLEEAEDDTEDLDMSE---------WMGLNLSPATIATIRRLKFTKPT 248
Query: 198 PIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEK 257
IQ A IP Q D+IG A TGSGKTLAFG+PI+ + LE+ + E + E
Sbjct: 249 TIQCAAIPHI--QAGHDVIGKASTGSGKTLAFGIPIVDKWLEKNGEEQDSAMETDDAPEA 306
Query: 258 YAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR--VVPIVGGMSTEKQERLLKARPE 315
AP ALII+PTRELA Q+ +H+KE+ G++ + V + GG+S KQ+R L A+ +
Sbjct: 307 KAP----LALIISPTRELAHQIMNHIKELCAGLSKQPYVCSVTGGLSVYKQQRQL-AKAD 361
Query: 316 LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 375
+VVGTPGRLWE++S + + + V+DEADR++ GHF+E + I L
Sbjct: 362 IVVGTPGRLWEVLSTNTTVMESFKKIQYLVVDEADRILSEGHFKEAEEIFKALDRNVTEE 421
Query: 376 EGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIE 433
+ + EQT + RQTLVFSAT L K K G + ++ S+E
Sbjct: 422 DDEDEQTLS----------PRQTLVFSATFHKGLQQKLAGKGKFGLMSEEE------SME 465
Query: 434 TLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 466
L +R R VD+ VS +A L+E IE
Sbjct: 466 YLLKRLNFREEKPEFVDVNPVSQMAEGLKEGMIE 499
>gi|334310507|ref|XP_001370949.2| PREDICTED: ATP-dependent RNA helicase DDX24 [Monodelphis domestica]
Length = 814
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 180/356 (50%), Gaps = 85/356 (23%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ +GF PTPIQ + A A + +DI+GAAETGSGKTLAF
Sbjct: 201 DVSAWKDLFVPEPVLQALSSMGFSAPTPIQALAL-APAIRDNLDILGAAETGSGKTLAFA 259
Query: 231 LPIMQRLL----EERE----KAG--------------------KML-------EEKGEEA 255
+P++ +L E++E +AG ++L EE+ +E
Sbjct: 260 IPMIHSVLRWQDEQKETHHGQAGLHSADGESLGDADDSSDDSNEILNPLPMEREEERDEN 319
Query: 256 EKYAPK------------------GH------LRALIITPTRELALQVTDHLKEVAKGIN 291
++P GH L L++TPTRELA+QV H+ VAK
Sbjct: 320 PSHSPSDKEESGDIKLEFEYEKAAGHRNRSNPLLGLVLTPTRELAVQVKHHIDAVAKFTG 379
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+R +VGGM+ +KQ+R+L RPE+V+ TPGRLWEL+ +HL +L L V+DEADR
Sbjct: 380 IRTALLVGGMAPQKQQRMLTRRPEIVIATPGRLWELIKEQHQHLSDLKQLRCLVIDEADR 439
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL--SA 409
M+E GHF EL +++ML N+ Q +RQT VFSAT+ L A
Sbjct: 440 MVEKGHFVELSQLLEML------NDSQY-------------NPERQTFVFSATLTLVHQA 480
Query: 410 DFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
R K + K+ ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 481 PARVFQKKNAKKIDKT----GKLDMLMQKIGMRGKPKVIDLTRKEATVETLTETKI 532
>gi|402591039|gb|EJW84969.1| DEAD/DEAH box helicase [Wuchereria bancrofti]
Length = 485
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 138/242 (57%), Gaps = 34/242 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W L + ++K++ +GF EPT IQK IP+A + + DIIGAAETGSGKTLAFG+P++
Sbjct: 4 WINLYISDAVLKAVADMGFTEPTEIQKLVIPSAV-RDRFDIIGAAETGSGKTLAFGVPVV 62
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ LL + LE G++ KG +RALI+ PTREL +Q+ +H+ + K +V
Sbjct: 63 EHLLANQS----FLESSGQK------KG-IRALILAPTRELVMQIKNHIDALLKYTPFKV 111
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH--LVELHTLSFFVLDEADRM 352
+VGG+S +KQER+LK PE+V+ TPGRL LM E L + L V+DE DRM
Sbjct: 112 ASVVGGLSLQKQERILKYVPEIVIATPGRLLALMRSAEADSCLSDWSHLQCLVVDETDRM 171
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 412
IE GHF +LQ I+D L KK QT VFSAT+ +
Sbjct: 172 IEKGHFEDLQHILDTLRKNTS--------------------KKLQTFVFSATLTYTHPVP 211
Query: 413 KK 414
KK
Sbjct: 212 KK 213
>gi|346970819|gb|EGY14271.1| ATP-dependent RNA helicase MAK5 [Verticillium dahliae VdLs.17]
Length = 700
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 176/334 (52%), Gaps = 39/334 (11%)
Query: 140 KKIKTVEESV--TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPT 197
KK +E +V T+ DDAE+ +SE W L L P + +I RL F +PT
Sbjct: 111 KKDAALESNVFSTLEEAEDDAEDLDMSE---------WMGLNLSPATIATIRRLKFTKPT 161
Query: 198 PIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEK 257
IQ IP Q D+IG A TGSGKTLAFG+PI+ + LE+ + + E + E
Sbjct: 162 TIQSTAIPHI--QAGHDVIGKASTGSGKTLAFGIPIVDKWLEKNGEEQESAMETDDAPEA 219
Query: 258 YAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR--VVPIVGGMSTEKQERLLKARPE 315
AP ALII+PTRELA Q+ +H+K++ G++ + V + GG+S KQ+R L A+ +
Sbjct: 220 KAP----LALIISPTRELAHQIMNHIKDLCAGLSKQPYVCSVTGGLSVYKQQRQL-AKAD 274
Query: 316 LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 375
+VVGTPGRLWE++S + + + V+DEADR++ GHF+E + I L
Sbjct: 275 IVVGTPGRLWEVLSTNMTVMESFKKIQYLVVDEADRILSEGHFKEAEEIFKALDRNVTEE 334
Query: 376 EGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIE 433
+ + EQT + RQTLVFSAT L K K G + ++ S+E
Sbjct: 335 DDEDEQTLS----------PRQTLVFSATFHKGLQQKLAGKGKFGLMSEEE------SME 378
Query: 434 TLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 466
L +R R VD+ VS +A L+E IE
Sbjct: 379 YLLKRLNFREEKPEFVDVNPVSQMAKGLKEGMIE 412
>gi|325096020|gb|EGC49330.1| ATP-dependent RNA helicase MAK5 [Ajellomyces capsulatus H88]
Length = 770
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 35/305 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLP 232
W+ L + + S+ +L F +PTPIQ ACIP A+ H D++G A TGSGKTLAFG+P
Sbjct: 189 WDPLDISAEIQTSLSKLRFAKPTPIQTACIPLIASGH----DVVGKASTGSGKTLAFGIP 244
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKG 289
I++ L+ R + + GE + KY ALI++PTRELA Q++ H+ + A
Sbjct: 245 ILEYYLKNRREE-PVQHNDGELSSKYPI-----ALILSPTRELAHQLSKHITALCTNAPN 298
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
IN R+ + GG+S +KQ+R+L A ++V+GTPGRLW+++S G L + + F V+DEA
Sbjct: 299 INARIALLTGGLSVQKQQRVL-ANADIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEA 357
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNE--GQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
DR++ GHF+E++ I+ L ++ SE VS RQTLVFSAT
Sbjct: 358 DRLLSEGHFKEVEEILTALDRKEIHDKVTADSESEDDASKVSP-----RQTLVFSAT--- 409
Query: 408 SADFRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLE 461
F K L+ G ++ S+E L ++ R + +D+ V+ +A L+
Sbjct: 410 ---FHKGLQQKLAGKGRYFDGDLLDDKQSMEYLLKKLNFREDRPKFIDVNPVAQMAENLK 466
Query: 462 ESFIE 466
E +E
Sbjct: 467 EGLVE 471
>gi|189201219|ref|XP_001936946.1| ATP-dependent RNA helicase MAK5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984045|gb|EDU49533.1| ATP-dependent RNA helicase MAK5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 778
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 180/323 (55%), Gaps = 43/323 (13%)
Query: 151 VSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQ 210
++N PDD +E++ AW+EL L ++ ++ +L F +PT IQK+ IP
Sbjct: 197 LANQPDDDDEDV----------SAWDELELSEEMLGALAKLKFSKPTTIQKSTIPEIL-A 245
Query: 211 GKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIIT 270
G+ D+IG A TGSGKTLAFG+PI++ L R A K E E P ALII
Sbjct: 246 GR-DVIGKASTGSGKTLAFGIPIVESYLASRSSASK-------EPEDKMPI----ALIIA 293
Query: 271 PTRELALQVTDHLKEV-AKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWEL 327
PTRELA Q+ HL + AKG + I GG+S +KQ R L+ + ++VVGTPGRLWE+
Sbjct: 294 PTRELAHQINAHLIALCAKGDFDPPYIASITGGLSVQKQRRQLE-KADIVVGTPGRLWEV 352
Query: 328 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE-GQSEQTQTCV 386
+S G+ L + + F V+DEADR++ GHF+E+ I+ +L + ++E +S++ +
Sbjct: 353 ISDGQGLLRKFKQIKFLVVDEADRLLSEGHFKEMGEILKVLEPDDVTDENAESDEKEEI- 411
Query: 387 TVSSLQRKKRQTLVFSATIA--LSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRAN 444
KRQTLVFSAT L K+K G L ++ S+E L ++ R
Sbjct: 412 --------KRQTLVFSATFGKDLQRKLAGKVKGGGSDL---MSQQQSMEYLLKKLQFREE 460
Query: 445 VAI-VDLTNVSVLANKLEESFIE 466
+ +D +S +A+KL+E IE
Sbjct: 461 KPVFIDANPMSQMASKLQEGLIE 483
>gi|67522587|ref|XP_659354.1| hypothetical protein AN1750.2 [Aspergillus nidulans FGSC A4]
gi|74657524|sp|Q5BCI0.1|MAK5_EMENI RecName: Full=ATP-dependent RNA helicase mak5
gi|40744880|gb|EAA64036.1| hypothetical protein AN1750.2 [Aspergillus nidulans FGSC A4]
gi|259487094|tpe|CBF85492.1| TPA: ATP-dependent RNA helicase mak5 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BCI0] [Aspergillus
nidulans FGSC A4]
Length = 770
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 170/301 (56%), Gaps = 26/301 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA--AHQGKVDIIGAAETGSGKTLAFGL 231
AW L L P + S+ +L F PT +QK+CIP H D+IG A TGSGKTLAFGL
Sbjct: 198 AWEPLGLSPETLTSLSKLKFSTPTSVQKSCIPPILDGH----DVIGKASTGSGKTLAFGL 253
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AK 288
PI++ LE RE+ + E EE EK ALI++PTRELA Q+ H+ + A
Sbjct: 254 PILEHYLE-RERRKTIDSE--EEKEKIPI-----ALILSPTRELAHQLQKHIYGLISNAP 305
Query: 289 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
G+N R + GG+S +KQ+RLL+ ++V+GTPGR+WE++ G+ + + + F V+DE
Sbjct: 306 GVNARTALLTGGLSVQKQQRLLET-ADIVIGTPGRVWEVLRTGQGLIRRMQGIKFLVIDE 364
Query: 349 ADRMIENGHFRELQSIIDMLP-MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
ADR++ GHF+E++ I+ L + +G + + + V ++ RQTLVFSAT
Sbjct: 365 ADRLLSEGHFKEVEDILSSLDRVEDGGPPDEEDDSSEENVVPGVE---RQTLVFSAT--F 419
Query: 408 SADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFI 465
D ++KL G +N S+E L ++ R +D+ VS +A L+E +
Sbjct: 420 HRDLQQKLAGKGKWTGGDIMNKKESMEYLLQKLNFREEKPKFIDVNPVSQMAEGLKEGIV 479
Query: 466 E 466
E
Sbjct: 480 E 480
>gi|27882644|gb|AAH43900.1| LOC398446 protein, partial [Xenopus laevis]
Length = 660
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 177/359 (49%), Gaps = 73/359 (20%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIG 217
+E L + + + AW L + +++K++ LGF PTPIQ +P+A + K+DI+G
Sbjct: 183 SENALAHTSSKNADVSAWKNLHVPKVVLKALSFLGFTCPTPIQALALPSAI-RDKMDILG 241
Query: 218 AAETGSGKTLAFGLPIMQRLLE--EREKAGKMLEEKGEE--------------------- 254
AAETGSGKTLAF +P++ +LE + +++G E EE
Sbjct: 242 AAETGSGKTLAFAIPMIHSILEWQKHQESGAAEGETKEEPTSDVNNEIDATEKQEQDMSE 301
Query: 255 -------------------------AEKYAPKGHLRALI---ITPTRELALQVTDHLKEV 286
+ K G R L+ +TPTRELA+QV H+ V
Sbjct: 302 NEDVEQVEDNDDVSENFDINFNDMSSSKSGTWGKERPLLGLVVTPTRELAVQVKHHIDAV 361
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
AK ++ IVGGM+++KQ+RLL RPE+V+ TPGRLWEL+ HL L L V+
Sbjct: 362 AKFTGIKTAIIVGGMASQKQQRLLGRRPEIVIATPGRLWELIGERHPHLCNLRRLRCLVI 421
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
DEADRM+E GH+ EL ++++L + + KRQT VFSAT+
Sbjct: 422 DEADRMVEKGHYAELSQLLELLSEVHYN-------------------PKRQTFVFSATLT 462
Query: 407 LSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
L +L K Q V+ + + +L E+ GM+A ++DLT L E+ I
Sbjct: 463 LIHQAPTRLLQK--KRFQKVDKDSKLVSLMEKIGMKAKPKVIDLTRKQATVETLTETRI 519
>gi|397573945|gb|EJK48944.1| hypothetical protein THAOC_32221 [Thalassiosira oceanica]
Length = 980
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 164/273 (60%), Gaps = 16/273 (5%)
Query: 108 GDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAE 167
G D+ G+ + + LK + K++ K++K K + ++ S D ++++ + A
Sbjct: 181 GKPDDPFQGLSRRERVRLKRKLKKEQVKERKRLKREGLQSSKNSDAKTDGSKDDEAAVAS 240
Query: 168 ISTEFD-AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+ T + + + LH L + ++ L + PTPIQ + +PAA G+ DI+GAA TGSGKT
Sbjct: 241 LQTTWSISAPGVTLHETLSRGLHSLKYSYPTPIQASTLPAAI-LGRRDIVGAAPTGSGKT 299
Query: 227 LAFGLPIMQRLLEERE-----KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 281
L++GLPI+Q LL+ER+ G E E + L+ALI+TPTRELALQVT
Sbjct: 300 LSYGLPILQYLLDERDASASRSCGVATPESTRE------RLPLQALILTPTRELALQVTS 353
Query: 282 HLKEVAKGINVRVVPIVGGMSTEKQERLL-KARPELVVGTPGRLWELMSGGE-KHLVELH 339
L++V+ +V++ IVGG + KQ+R L K RP ++V TPGRLWELMS + +HL +L
Sbjct: 354 ELQKVSCN-SVKIGTIVGGFAEVKQQRTLNKVRPPVLVATPGRLWELMSSKDYEHLNDLT 412
Query: 340 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 372
L F +DEADRMI+ G F +L+ I +++ N
Sbjct: 413 QLRFLCVDEADRMIKQGSFPQLRQIFELIDAAN 445
>gi|156060651|ref|XP_001596248.1| hypothetical protein SS1G_02468 [Sclerotinia sclerotiorum 1980]
gi|160409986|sp|A7EAY2.1|MAK5_SCLS1 RecName: Full=ATP-dependent RNA helicase mak5
gi|154699872|gb|EDN99610.1| hypothetical protein SS1G_02468 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 780
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 179/314 (57%), Gaps = 36/314 (11%)
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIG 217
E L +A E W EL L + ++ ++GF +PTPIQ IP A H D++G
Sbjct: 200 EALDEDAAGEVEVSGWVELDLSSNTLMALSKMGFSKPTPIQSEAIPEVLAGH----DVVG 255
Query: 218 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELAL 277
A TGSGKTLAFG+PI+++ LE G++ E++ +++ + ALI++PTRELA
Sbjct: 256 KASTGSGKTLAFGIPIVEKWLE---VYGELDEDELKKSTRPP-----TALILSPTRELAH 307
Query: 278 QVTDHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
Q+T+H+ + KG+ + V + GG+S +KQ+R L ++ ++++GTPGRLWE++S +
Sbjct: 308 QLTEHITTLCKGMPTSPYVAAVTGGLSVQKQQRQL-SKADIIIGTPGRLWEVISSSNELS 366
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
L + F V+DEADR++ +GHF+E + I++ L T+G+ + E T
Sbjct: 367 AGLKQVRFLVIDEADRLLTDGHFKEAEEILNALDRTHGNEDDDEEDT----------LPP 416
Query: 396 RQTLVFSATIALSADFRKKLKHG-SLKLKQSV-NGLNSIETLSERAGMR-ANVAIVDLTN 452
RQTLVFSAT F K L+ + K KQS + S+E L ++ R VD+
Sbjct: 417 RQTLVFSAT------FHKGLQQKLAGKGKQSFKDDSQSMEYLLKKLNFREEKPKFVDVNP 470
Query: 453 VSVLANKLEESFIE 466
+S +A L+E +E
Sbjct: 471 ISQMAANLKEGMVE 484
>gi|443922417|gb|ELU41869.1| delta-sterol C-methyltransferase [Rhizoctonia solani AG-1 IA]
Length = 1600
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/315 (38%), Positives = 169/315 (53%), Gaps = 45/315 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W + LHP++ S+ L F PTPIQK+ +P A QG+ D++G AETGSGKTLA+ LPI+
Sbjct: 137 WASMSLHPIISHSLLELSFTNPTPIQKSALPFA-QQGR-DVVGVAETGSGKTLAYSLPIL 194
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK------ 288
Q +L + K A ALI+ PTRELALQV +HLK+V
Sbjct: 195 QYILSN---------PTSNSSRKLA------ALILAPTRELALQVCEHLKKVISAGASSS 239
Query: 289 --GI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL-----HT 340
G+ V + IVGG+S +KQ R+L+ +++V TPGRLW+++ GE V L +
Sbjct: 240 NGGVPRVSIAAIVGGLSVQKQRRILERGADIIVATPGRLWDVL--GEVFSVYLLAERIRS 297
Query: 341 LSFFVLDEADRMIENGHFRELQSIIDML-----PMTNGSNEGQ---SEQTQTCVTVSSLQ 392
+ F VLDEADRM+E GHF+EL +I+ + P G +E T V S+
Sbjct: 298 VQFLVLDEADRMVEEGHFQELDNIVKLTVRRKEPEEQDEMAGDPVFAEATAAAVD-SAPA 356
Query: 393 RKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLT 451
+ QT VFSAT +S + + L S K K ++++ L + R N AIVDL+
Sbjct: 357 NTEMQTFVFSAT--MSKELQINLSRRSTKRKNKDQKGSTLDDLLMKLDFRDPNPAIVDLS 414
Query: 452 NVSVLANKLEESFIE 466
+ L ES IE
Sbjct: 415 PEYGKVSTLTESRIE 429
>gi|358369372|dbj|GAA85987.1| ATP dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 766
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 174/303 (57%), Gaps = 29/303 (9%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA--AHQGKVDIIGAAETGSGKTLAFGL 231
AW L L P ++ + ++ F PT +QK+CIP H D+IG A TGSGKTLAFG+
Sbjct: 193 AWESLGLSPEILTGLSKMKFTTPTLVQKSCIPQILDGH----DVIGKASTGSGKTLAFGI 248
Query: 232 PIMQRLLEERE---KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA- 287
PI++ LE++ +AGK EEK +++ AP ALI++PTRELA Q+ H+ E+A
Sbjct: 249 PILEHYLEKKREDLRAGK--EEKKKDS---API----ALIMSPTRELAHQLAKHIGELAL 299
Query: 288 --KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
G + R+ + GG+S +KQ+R+L A ++V+GTPGR+WE++S G+ + ++ + F V
Sbjct: 300 HAPGSSARIALLTGGLSVQKQQRVL-AGADIVIGTPGRVWEVLSSGQGLIRKMSDIKFLV 358
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+DEADR++ GHF+E + I+ L + G + + R +RQTLVFSAT
Sbjct: 359 IDEADRLLSEGHFKEAEEILGALDRVEDGDFGGDDSEDEEKEDA---RAQRQTLVFSAT- 414
Query: 406 ALSADFRKKLKHGSLKLKQSV-NGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEES 463
D ++KL + + + S+E L ++ R +D+ VS +A L+E
Sbjct: 415 -FHRDLQQKLAGKARWTGGDIMSNKESMEYLLQKLKFREEKPKFIDVNPVSQMAEGLKEG 473
Query: 464 FIE 466
+E
Sbjct: 474 IVE 476
>gi|147904244|ref|NP_001082400.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Xenopus laevis]
gi|50418383|gb|AAH77543.1| LOC398446 protein [Xenopus laevis]
Length = 706
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 177/359 (49%), Gaps = 73/359 (20%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIG 217
+E L + + + AW L + +++K++ LGF PTPIQ +P+A + K+DI+G
Sbjct: 94 SENALAHTSSKNADVSAWKNLHVPKVVLKALSFLGFTCPTPIQALALPSAI-RDKMDILG 152
Query: 218 AAETGSGKTLAFGLPIMQRLLE--EREKAGKMLEEKGEE--------------------- 254
AAETGSGKTLAF +P++ +LE + +++G E EE
Sbjct: 153 AAETGSGKTLAFAIPMIHSILEWQKHQESGAAEGETKEEPTSDVNNEIDATEKQEQDMSE 212
Query: 255 -------------------------AEKYAPKGHLRALI---ITPTRELALQVTDHLKEV 286
+ K G R L+ +TPTRELA+QV H+ V
Sbjct: 213 NEDVEQVEDNDDVSENFDINFNDMSSSKSGTWGKERPLLGLVVTPTRELAVQVKHHIDAV 272
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
AK ++ IVGGM+++KQ+RLL RPE+V+ TPGRLWEL+ HL L L V+
Sbjct: 273 AKFTGIKTAIIVGGMASQKQQRLLGRRPEIVIATPGRLWELIGERHPHLCNLRRLRCLVI 332
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
DEADRM+E GH+ EL ++++L + + KRQT VFSAT+
Sbjct: 333 DEADRMVEKGHYAELSQLLELLSEVHYN-------------------PKRQTFVFSATLT 373
Query: 407 LSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
L +L K Q V+ + + +L E+ GM+A ++DLT L E+ I
Sbjct: 374 LIHQAPTRLLQK--KRFQKVDKDSKLVSLMEKIGMKAKPKVIDLTRKQATVETLTETRI 430
>gi|242764605|ref|XP_002340809.1| ATP dependent RNA helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218724005|gb|EED23422.1| ATP dependent RNA helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 765
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 211/442 (47%), Gaps = 61/442 (13%)
Query: 61 GGFLSLEEIDEASYNLQIPKPE-----KGKPGKKTNTKK-RKRSSANEEDPGDGDGDEDG 114
GGF LEEID + I KPE K K TK K++ +E P D + G
Sbjct: 53 GGFFGLEEID----GVDIIKPESSGQIKFKVAADKPTKSILKKTEHADETPNDNIEEWSG 108
Query: 115 NGVQKEQE------------------KNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPD 156
+EQE KN ++K KK+++ K + + + P
Sbjct: 109 FSDGEEQEVEAQKKQKTKKKSEYAKQKNPADEKKPAAKKEQRQPNAKGGKPDEKIQSLPF 168
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVD 214
A L E E + AW+ L L P L S+ +L F P+ IQ+A IP A H D
Sbjct: 169 TA---LDEEVEDEVDVSAWDSLGLSPALQTSLSKLKFSTPSTIQQAVIPEVLAGH----D 221
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
++G A TGSGKTLAFG+PI++ L R + G E+K +E++ A LI++PTRE
Sbjct: 222 VVGKASTGSGKTLAFGIPILEYYLGTRGQHGTPKEKKKKESQPIA-------LILSPTRE 274
Query: 275 LALQVTDH---LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
LA Q+ H L N R+ + GG++ +KQ+RLL A ++V+GTPGR+WE++S G
Sbjct: 275 LAHQLAKHIGTLNSHTPAANARIALLTGGLAIQKQQRLL-ADADIVIGTPGRVWEILSSG 333
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT-NGSNEGQSEQTQTCVTVSS 390
+ + + + VLDEADR++ +GH++EL+ I+D L + S
Sbjct: 334 TGLIQRMSRVKYLVLDEADRLLSDGHYKELEEILDALDRKEDNEEAEDSPSESEEDEEKE 393
Query: 391 LQRKKRQTLVFSATIALSADFRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMR-AN 444
RQTLVFSAT F K L+ G +N S+E L + R
Sbjct: 394 DATVARQTLVFSAT------FHKGLQQKLSGKGKFMSSDLMNKSESMEYLLRKLKFREEK 447
Query: 445 VAIVDLTNVSVLANKLEESFIE 466
+D+ +S +A L+E +E
Sbjct: 448 PKFIDVNPISQMAQGLKEGILE 469
>gi|225561194|gb|EEH09475.1| ATP-dependent RNA helicase MAK5 [Ajellomyces capsulatus G186AR]
Length = 771
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 35/305 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLP 232
W+ L + + S+ +L F +PTPIQ ACIP A+ H D++G A TGSGKTLAFG+P
Sbjct: 189 WDPLDISAEIQTSLSKLRFAKPTPIQTACIPLIASGH----DVVGKASTGSGKTLAFGIP 244
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKG 289
I++ L+ R + + GE + KY ALI++PTRELA Q++ H+ + A
Sbjct: 245 ILEYYLKNRCEE-PVQHNHGELSSKYPI-----ALILSPTRELAHQLSKHITALCTNAPN 298
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
IN R+ + GG+S +KQ+R+L A ++V+GTPGRLW+++S G L + + F V+DEA
Sbjct: 299 INARIALLTGGLSVQKQQRVL-ANADIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEA 357
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNE--GQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
DR++ GHF+E++ I+ L ++ SE VS RQTLVFSAT
Sbjct: 358 DRLLSEGHFKEVEEILTALDRKEIHDKVTADSESEDDASKVSP-----RQTLVFSAT--- 409
Query: 408 SADFRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLE 461
F K L+ G ++ S+E L ++ R + +D+ V+ +A L+
Sbjct: 410 ---FHKGLQQKLAGKGRYFDGDLLDDKQSMEYLLKKLNFREDRPKFIDVNPVAQMAENLK 466
Query: 462 ESFIE 466
E +E
Sbjct: 467 EGLVE 471
>gi|224051667|ref|XP_002200206.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Taeniopygia guttata]
Length = 796
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 173/363 (47%), Gaps = 79/363 (21%)
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAA 219
E L + + + AW +L + +++++ LGF PTPIQ +P+A + +D++GAA
Sbjct: 181 EVLSASTDQKADVSAWKDLFVPEPVLQALSYLGFSAPTPIQALALPSAI-RDNMDVLGAA 239
Query: 220 ETGSGKTLAFGLPIMQRLL----------------------------EEREKAGKML--- 248
ETGSGKTLAF +P++ +L E+ ++A K+
Sbjct: 240 ETGSGKTLAFAIPMIHSVLQWQKSSNSTTRNDSVSKESHQHHDEPRWEDEDEAEKLTHQQ 299
Query: 249 -EEKGEEAEKYAPKGHLRAL-------------------------IITPTRELALQVTDH 282
E+ G+E + G ++ L ++TPTRELA+QV H
Sbjct: 300 AEDSGDEDDASFTTGCVKVLENVEFDCDDETHTGDSNKKRPLLGLVLTPTRELAVQVKHH 359
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
+ VAK ++ +VGGM+ +KQER+L +PE+V+ TPGRLWEL+ HL L L
Sbjct: 360 IDAVAKFTGIKTAILVGGMAAQKQERVLNRKPEIVIATPGRLWELVKERHPHLSNLRQLR 419
Query: 343 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 402
V+DEADRM+E GHF EL ++++L N+ Q +RQT VFS
Sbjct: 420 CLVIDEADRMVEKGHFLELSQLLEIL------NDSQ-------------YNPQRQTFVFS 460
Query: 403 ATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEE 462
AT+ L ++ K +E L E+ G++ ++DLT L E
Sbjct: 461 ATLTLVHQTPTRVLQKKNAKKMDKK--TKLELLMEKVGIKGKPKVIDLTRKEATVETLTE 518
Query: 463 SFI 465
+ I
Sbjct: 519 TRI 521
>gi|406859182|gb|EKD12251.1| DEAD/DEAH box helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 762
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/315 (38%), Positives = 178/315 (56%), Gaps = 42/315 (13%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDII 216
EE+ V E T+ AW EL L P + ++ +LGF++PT IQ + IP A H D++
Sbjct: 186 EEDAVEE---ETDVSAWTELDLSPDTLSALSKLGFQKPTLIQSSAIPEIMAGH----DVV 238
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 276
G A TGSGKTLAFG+PI++ +E G++ E+ E + P ALI++PTRELA
Sbjct: 239 GKASTGSGKTLAFGIPILESWIE---TYGQLDED---ELKASRPP---TALILSPTRELA 289
Query: 277 LQVTDHLKEVAKGINV--RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
Q+T+H+ + KG+ V + GG+S +KQ+R L A+ ++V+GTPGRLWE+MS +
Sbjct: 290 HQLTEHITALCKGLPSAPYVAAVTGGLSVQKQQRQL-AKADIVIGTPGRLWEVMSSSIEL 348
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 394
+ F V+DEADR++ GHFRE + II GS + Q + + V +
Sbjct: 349 TAAFKKIKFLVVDEADRLLTEGHFREAEQII-------GSLDRQQDADEDDEIVPT---- 397
Query: 395 KRQTLVFSATIALSADFRKKLKHG-SLKLKQSV-NGLNSIETLSERAGMRANVA-IVDLT 451
RQTLVFSAT F K L+ + K KQ + + S+E L ++ R + VD+
Sbjct: 398 -RQTLVFSAT------FHKGLQQKLAGKGKQGLMDDSESMEYLLKKLNFREDKPKFVDVN 450
Query: 452 NVSVLANKLEESFIE 466
+S +A L+E +E
Sbjct: 451 PISQMAEGLKEGMVE 465
>gi|85086234|ref|XP_957656.1| hypothetical protein NCU04041 [Neurospora crassa OR74A]
gi|74662508|sp|Q7RZH4.1|MAK5_NEUCR RecName: Full=ATP-dependent RNA helicase mak-5
gi|28918750|gb|EAA28420.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|39979232|emb|CAE85602.1| related to ATP-dependent RNA helicase [Neurospora crassa]
Length = 805
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 164/310 (52%), Gaps = 39/310 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLP 232
W L L P ++ SI +L F +PT IQ IP A H D+IG A TGSGKTLAFG+P
Sbjct: 211 WVPLDLSPRMISSIAKLRFSKPTVIQSKAIPEIMAGH----DVIGKASTGSGKTLAFGIP 266
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
+++ L E + EE+ KG ALI++PTRELA Q+ DHL+ + KG+
Sbjct: 267 VIESWLSAAETRKQNKEER---------KGAT-ALILSPTRELAQQIRDHLQALCKGLPT 316
Query: 293 --RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+ ++GGM+ +KQ+R L+ ++V+ TPGR+WE+MS L L +SF VLDEAD
Sbjct: 317 APYICSVLGGMAVQKQKRQLQV-ADIVIATPGRMWEVMSSDNSVLASLRNISFLVLDEAD 375
Query: 351 RMIENGHFRELQSIIDML--PMTNGSNEGQ-------------SEQTQTCVTVSSLQRKK 395
R++++GHF+E + I L P +NE Q E ++ K
Sbjct: 376 RLLKDGHFKEAEEIFKALDRPPVEENNEDQKMGGTDEEGQEEEEEDSEEEEEEEEEHVNK 435
Query: 396 RQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSV 455
RQTL+FSAT + + ++KL G K K + +E L ++ R VD V
Sbjct: 436 RQTLIFSAT--FNKNLQQKLA-GKSKFKAT--STQDMEYLLQKLNFRETPKFVDANPVHQ 490
Query: 456 LANKLEESFI 465
+A L+E I
Sbjct: 491 MAENLKEGLI 500
>gi|336375445|gb|EGO03781.1| hypothetical protein SERLA73DRAFT_46424 [Serpula lacrymans var.
lacrymans S7.3]
Length = 615
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 172/338 (50%), Gaps = 68/338 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+ LHP L++ ++ GF PTPIQ +P A +G+ DI+G AETGSGKTLA+GLPI+
Sbjct: 34 WHSYSLHPHLLQILHHQGFTTPTPIQSKSLPKAM-EGR-DIVGVAETGSGKTLAYGLPIL 91
Query: 235 QRLLEE-REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-- 291
LL R + K+ K ++AL++ PTRELALQV+DHL A+ I
Sbjct: 92 HHLLSRSRHPSSKV-------------KRQVQALVLAPTRELALQVSDHLNMFARSIEAP 138
Query: 292 --------------------------------------VRVVPIVGGMSTEKQERLLKAR 313
V + IVGGMS +KQ R++
Sbjct: 139 IKEETLDVELSETQQLKDKSKGKNVVSGTAKTFSKPPLVSIAAIVGGMSAQKQRRIIDRG 198
Query: 314 PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 373
++++ TPGRLW+++ + +L +L + +LDEADRM+ENGHF EL +I+ + +
Sbjct: 199 VDILIATPGRLWDILEEDDSLAKQLASLRYLILDEADRMVENGHFAELDNILRLTLRLSR 258
Query: 374 SNEGQSEQTQTCV-TVSSLQRKKRQTLVFSATIALSADFRKKLKHGS---LKLKQSVNGL 429
E Q + Q T +L QT VFSAT LS D ++ LK G + K
Sbjct: 259 FFETQDTEVQAHAETEDAL-----QTFVFSAT--LSKDLQRDLKKGYRPRIGKKGRSKPA 311
Query: 430 NSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
+++E L R R AN ++D++ + + L+ES IE
Sbjct: 312 STLEDLVLRLDFRDANPEVIDISPEGGVVSGLQESKIE 349
>gi|240277958|gb|EER41465.1| ATP-dependent RNA helicase MAK5 [Ajellomyces capsulatus H143]
Length = 723
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 35/305 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLP 232
W+ L + + S+ +L F +PTPIQ ACIP A+ H D++G A TGSGKTLAFG+P
Sbjct: 137 WDPLDISAEIQTSLSKLRFAKPTPIQTACIPLIASGH----DVVGKASTGSGKTLAFGIP 192
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKG 289
I++ L+ R + + GE + KY ALI++PTRELA Q++ H+ + A
Sbjct: 193 ILEYYLKNRREE-PVQHNDGELSSKYPI-----ALILSPTRELAHQLSKHITALCTNAPN 246
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
IN R+ + GG+S +KQ+R+L A ++V+GTPGRLW+++S G L + + F V+DEA
Sbjct: 247 INARIALLTGGLSVQKQQRVL-ANADIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEA 305
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNE--GQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
DR++ GHF+E++ I+ L ++ SE VS RQTLVFSAT
Sbjct: 306 DRLLSEGHFKEVEEILTALDRKEIHDKVTADSESEDDASKVSP-----RQTLVFSAT--- 357
Query: 408 SADFRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLE 461
F K L+ G ++ S+E L ++ R + +D+ V+ +A L+
Sbjct: 358 ---FHKGLQQKLAGKGRYFDGDLLDDKQSMEYLLKKLNFREDRPKFIDVNPVAQMAENLK 414
Query: 462 ESFIE 466
E +E
Sbjct: 415 EGLVE 419
>gi|350286853|gb|EGZ68100.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 777
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 157/295 (53%), Gaps = 34/295 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLP 232
W L L P ++ SI +L F +PT IQ IP A H D+IG A TGSGKTLAFG+P
Sbjct: 208 WVPLDLSPRMISSIAKLRFSKPTVIQSKAIPEIMAGH----DVIGKASTGSGKTLAFGIP 263
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
+++ L E + EE+ KG ALI++PTRELA Q+ DHL+ + KG+
Sbjct: 264 VIESWLSAAETRKQNKEER---------KGAT-ALILSPTRELAQQIRDHLQALCKGLPT 313
Query: 293 --RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+ ++GGM+ +KQ+R L+ ++V+ TPGR+WE+MS L L +SF VLDEAD
Sbjct: 314 APYICSVLGGMAVQKQKRQLQV-ADIVIATPGRMWEVMSSDNSVLASLRNISFLVLDEAD 372
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
R++++GHF+E + I L + KRQTL+FSAT + +
Sbjct: 373 RLLKDGHFKEAEEIFKAL----------DRPPEEEEEEEEEHVNKRQTLIFSAT--FNKN 420
Query: 411 FRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
++KL G K K + +E L ++ R VD V +A L+E I
Sbjct: 421 LQQKLA-GKSKFKAT--STQDMEYLLQKLNFRETPKFVDANPVHQMAENLKEGLI 472
>gi|310800598|gb|EFQ35491.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 777
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/327 (35%), Positives = 173/327 (52%), Gaps = 38/327 (11%)
Query: 155 PDDAEEEL--------VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP- 205
PDDA+ E V +A+ + W +L L P L+ +I +L F +PT IQ + IP
Sbjct: 179 PDDAKLESSGFAALEEVQDADEDLDMTPWVDLGLSPALVAAIAKLKFAKPTNIQSSTIPD 238
Query: 206 -AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL 264
A H D+IG A TGSGKTLAF +PI++ +++ + G GE K P
Sbjct: 239 ILAGH----DVIGKASTGSGKTLAFSIPIVEEWVDKHDGDGNA---DGERPSK--PDNTP 289
Query: 265 RALIITPTRELALQVTDHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPG 322
ALI++PTRELA Q+T+H+K + G+ V + GG+S KQ+R L A+ ++V+GTPG
Sbjct: 290 FALILSPTRELAHQITNHIKNLCAGLLNAPFVCSVTGGLSVFKQQRQL-AKADIVIGTPG 348
Query: 323 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT 382
RLWE++SG + L + + V+DEADR++ GHF+E I+D L +EG+
Sbjct: 349 RLWEVISGSRELLAGFRKIRYLVVDEADRLLSEGHFKEAGQILDALDREVIEDEGEDYDN 408
Query: 383 QTCVTVSSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAG 440
+ ++ RQTLVFSAT L K K G + K+ S+E L ++
Sbjct: 409 EKGLS-------DRQTLVFSATFHQGLQQKLAGKGKWGLMSEKE------SMEYLLKKLN 455
Query: 441 MR-ANVAIVDLTNVSVLANKLEESFIE 466
R +D+ +A L+E IE
Sbjct: 456 FREEKPKFIDVNPAKQMAAGLKEGLIE 482
>gi|116202351|ref|XP_001226987.1| hypothetical protein CHGG_09060 [Chaetomium globosum CBS 148.51]
gi|88177578|gb|EAQ85046.1| hypothetical protein CHGG_09060 [Chaetomium globosum CBS 148.51]
Length = 1002
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 160/302 (52%), Gaps = 34/302 (11%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ W L L P ++ SI RL F +PT IQ IP + D++G A TGSGKTLAFG
Sbjct: 196 DMSQWVPLDLSPQILSSIARLKFAKPTAIQARAIPQIMNGH--DVVGKAATGSGKTLAFG 253
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
+PI++ L +R + + AEK P A+I++PTRELA Q+ DHLK + G+
Sbjct: 254 IPIVESWLAKRAE--------NQTAEKKGPI----AMILSPTRELAHQICDHLKLLCAGL 301
Query: 291 NV--RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
+ + GG++ +KQ+R L+ R ++VVGTPGR+WELMS L L + F V+DE
Sbjct: 302 TTGPYICSVTGGLAVQKQQRQLE-RADIVVGTPGRMWELMSSSNSVLGSLRGIDFLVVDE 360
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 408
ADR++++GHF++ + I+ + T E + R RQTLVFSAT
Sbjct: 361 ADRLLKDGHFKDAEEILKAIDRTVPGEEADGDSDDEA------PRHHRQTLVFSAT---- 410
Query: 409 ADFRKKLKHGSLKLKQSVN---GLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESF 464
F K L+ L K N S+E L ++ R VD +S +A L+E
Sbjct: 411 --FNKNLQQ-KLAGKARFNLTSDTESLEYLLKKLNFREERPKFVDTNPISQMAENLKEGL 467
Query: 465 IE 466
I+
Sbjct: 468 IQ 469
>gi|425778251|gb|EKV16391.1| ATP dependent RNA helicase, putative [Penicillium digitatum Pd1]
gi|425780471|gb|EKV18477.1| ATP dependent RNA helicase, putative [Penicillium digitatum PHI26]
Length = 771
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 146/247 (59%), Gaps = 24/247 (9%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA--AHQGKVDIIGAAETGSGKTLAFGL 231
AW+ L L P ++ ++ F P+ IQKA IPA H D++G A TGSGKTLAFG+
Sbjct: 193 AWDGLNLSPETFTALSKMKFSSPSAIQKASIPAILDGH----DVVGKASTGSGKTLAFGI 248
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AK 288
PI++ L++R GK+ E+ + +P ALI++PTRELA Q+ H+ ++ +
Sbjct: 249 PIIEHYLDKR---GKLREQSDTSEQNKSPI----ALILSPTRELAHQLGKHIGDLIANSP 301
Query: 289 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
N R+ + GGMS +KQ+R L A ++VVGTPGR+WE++S G + ++ + F V+DE
Sbjct: 302 DTNARIALVTGGMSIQKQQRQL-ATADIVVGTPGRVWEILSTGTGLIRKMQKIQFLVVDE 360
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 408
ADR++ GHF+E++ I+D L + +Q + S RQTLVFSAT
Sbjct: 361 ADRLLSEGHFKEVEDILDALDKHQAGDIADVDQEEEEEQPS-----HRQTLVFSAT--FH 413
Query: 409 ADFRKKL 415
D ++KL
Sbjct: 414 KDLQQKL 420
>gi|347831310|emb|CCD47007.1| hypothetical protein [Botryotinia fuckeliana]
Length = 774
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 175/315 (55%), Gaps = 40/315 (12%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDII 216
EE+ E ++S+ W EL L + ++ ++GF +PTPIQ IP A H D++
Sbjct: 197 EEDAAKEVDVSS----WEELDLSSNTLSALSKMGFSKPTPIQSEAIPEVLAGH----DVV 248
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 276
G A TGSGKTLAFG+PI+++ LE A L+E + P ALI++PTRELA
Sbjct: 249 GKASTGSGKTLAFGIPIVEKWLE----AYGELDEDELKKNTRPPT----ALILSPTRELA 300
Query: 277 LQVTDHLKEVAKGINVR--VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
Q+T+H+ + KG+ V + GG+S +KQ+R L A+ ++++GTPGRLWE++S +
Sbjct: 301 HQLTEHITALCKGMPTSPWVAAVTGGLSVQKQQRQL-AKADIIIGTPGRLWEVISSSNEL 359
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 394
L + F V+DEADR++ +GHF+E + I++ L T+G + +
Sbjct: 360 SASLKQVRFLVIDEADRLLTDGHFKEAEEILNALDRTHGDED----------DEEEDELP 409
Query: 395 KRQTLVFSATIALSADFRKKLKHG-SLKLKQSV-NGLNSIETLSERAGMR-ANVAIVDLT 451
RQTLVFSAT F K L+ + K KQS + S+E L ++ R VD+
Sbjct: 410 PRQTLVFSAT------FHKGLQQKLAGKGKQSFKDESQSMEYLLKKLNFREEKPKFVDVN 463
Query: 452 NVSVLANKLEESFIE 466
+S +A L+E +E
Sbjct: 464 PISQMAANLKEGMVE 478
>gi|448091200|ref|XP_004197272.1| Piso0_004519 [Millerozyma farinosa CBS 7064]
gi|448095690|ref|XP_004198303.1| Piso0_004519 [Millerozyma farinosa CBS 7064]
gi|359378694|emb|CCE84953.1| Piso0_004519 [Millerozyma farinosa CBS 7064]
gi|359379725|emb|CCE83922.1| Piso0_004519 [Millerozyma farinosa CBS 7064]
Length = 751
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 223/456 (48%), Gaps = 43/456 (9%)
Query: 21 RKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPK 80
+K+ +K + K ++LKW + D + G ELDG + E + + +
Sbjct: 34 KKKLQKGSKIVKADNLKWKEVEIPDNLDDYEGFYGLEELDGVDV---EYENGNIKFIVKD 90
Query: 81 PEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGK 140
+K + +K + ++ + D D D + G E + + + K+ K K
Sbjct: 91 GDKVEEKEKKTGDEVTKTEVSATDNDDEDASDFGGFSDDEMDVDGSDSTDVAPIKEAKAK 150
Query: 141 KIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQ 200
++ E+S +N + L I + W L L ++ + +L F +PTPIQ
Sbjct: 151 EVS--EDSELTANTFTNLSVTLPDPNSI--DLPHWKPLSLSAYTLQGLQQLKFSKPTPIQ 206
Query: 201 KACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAP 260
K IP A +G+ D +G A TGSGKTLA+G+PI++R L ++A + + ++ +P
Sbjct: 207 KKAIPYAL-EGR-DTVGKAVTGSGKTLAYGIPILERYLTRLQQA----QTHSKTSKISSP 260
Query: 261 KGHLRALIITPTRELALQVTDHLKEVAKGINV---RVVPIVGGMSTEKQERLLKARPELV 317
G +I PTRELA QV DHLKE+AK +V + GG+S +KQERLL+ P +V
Sbjct: 261 AG----IIFAPTRELAHQVVDHLKELAKYFPFPPNAIVSMTGGLSIQKQERLLEKGPGIV 316
Query: 318 VGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEG 377
V TPGR E++ EK++ +L VLDEADR++++GHF E + +++L + +++
Sbjct: 317 VTTPGRFLEILQSDEKYVTQLSGCDIVVLDEADRLLQDGHFEEFEKALELLSKSRKNSKA 376
Query: 378 QSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL------KHGSLKLKQSVNGLNS 431
+S + QTLV+SAT S D KL K K V+
Sbjct: 377 KSW--------------RWQTLVYSAT--FSKDLFSKLDKNPRRKETFDSSKSLVDNTEI 420
Query: 432 IETLSERAGMRANV-AIVDLTNVSVLANKLEESFIE 466
I L+ + R + A+VD ++A ++ E+ +E
Sbjct: 421 ITLLNSKLKFRDSAPALVDANPKEIVAGQITEALVE 456
>gi|17507641|ref|NP_491652.1| Protein F55F8.2, isoform a [Caenorhabditis elegans]
gi|351063669|emb|CCD71883.1| Protein F55F8.2, isoform a [Caenorhabditis elegans]
Length = 746
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 166/301 (55%), Gaps = 36/301 (11%)
Query: 170 TEFDAWNELRLHP-LLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
T+ AW + P ++++I ++GF EPT IQ A +PAA + + D++GAAETGSGKTLA
Sbjct: 151 TDISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAV-RDRQDVLGAAETGSGKTLA 209
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 288
FG+P++ RLLE + + ++ E E P RALI+ PTREL +Q+ H+ +
Sbjct: 210 FGIPLVARLLESSDDS-----QETESTEVRGP----RALIVAPTRELVIQIMKHINALIS 260
Query: 289 GINVRVVPIVGGMSTEKQERLL-KARPELVVGTPGRLWELMSGGE--KHLVELHTLSFFV 345
+ IVGG++ KQER++ + RP++VV TPGRLW +M E + L E L V
Sbjct: 261 TTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLV 320
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+DE DRM+E G+F EL I++ + +SE ++K QTLVFSAT+
Sbjct: 321 VDETDRMVEEGYFAELTHILNKI-------HEESE------------KEKLQTLVFSATL 361
Query: 406 ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANV-AIVDLTNVSVLANKLEESF 464
+ + + K + ++ I+ L + G+R N ++DLT A L E+
Sbjct: 362 TFAK--AQDVAEEEKKKAKELSSQQKIQRLIKLTGLRENKHKVIDLTRQMGTAGCLVEAR 419
Query: 465 I 465
I
Sbjct: 420 I 420
>gi|154314076|ref|XP_001556363.1| hypothetical protein BC1G_04981 [Botryotinia fuckeliana B05.10]
Length = 490
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 174/315 (55%), Gaps = 40/315 (12%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA--AAHQGKVDII 216
EE+ E ++S+ W EL L + ++ ++GF +PTPIQ IP A H D++
Sbjct: 197 EEDAAKEVDVSS----WEELDLSSNTLSALSKMGFSKPTPIQSEAIPEVLAGH----DVV 248
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 276
G A TGSGKTLAFG+PI+++ LE A L+E + P ALI++PTRELA
Sbjct: 249 GKASTGSGKTLAFGIPIVEKWLE----AYGELDEDELKKNTRPP----TALILSPTRELA 300
Query: 277 LQVTDHLKEVAKGINVR--VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
Q+T+H+ + KG+ V + GG+S +KQ+R L A+ ++++GTPGRLWE +S +
Sbjct: 301 HQLTEHITALCKGMPTSPWVAAVTGGLSVQKQQRQL-AKADIIIGTPGRLWEGISSSNEL 359
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 394
L + F V+DEADR++ +GHF+E + I++ L T+G + +
Sbjct: 360 SASLKQVRFLVIDEADRLLTDGHFKEAEEILNALDRTHGDED----------DEEEDELP 409
Query: 395 KRQTLVFSATIALSADFRKKLKHG-SLKLKQSV-NGLNSIETLSERAGMRANVA-IVDLT 451
RQTLVFSAT F K L+ + K KQS + S+E L ++ R VD+
Sbjct: 410 PRQTLVFSAT------FHKGLQQKLAGKGKQSFKDESQSMEYLLKKLNFREEKPKFVDVN 463
Query: 452 NVSVLANKLEESFIE 466
+S +A L+E +E
Sbjct: 464 PISQMAANLKEGMVE 478
>gi|336466285|gb|EGO54450.1| hypothetical protein NEUTE1DRAFT_87798 [Neurospora tetrasperma FGSC
2508]
Length = 808
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 164/316 (51%), Gaps = 45/316 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLP 232
W L L P ++ SI +L F +PT IQ IP A H D+IG A TGSGKTLAFG+P
Sbjct: 208 WVPLDLSPRMISSIAKLRFSKPTVIQSKAIPEIMAGH----DVIGKASTGSGKTLAFGIP 263
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
+++ L E + EE+ KG ALI++PTRELA Q+ DHL+ + KG+
Sbjct: 264 VIESWLSAAETRKQNKEER---------KGAT-ALILSPTRELAQQIRDHLQALCKGLPT 313
Query: 293 --RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+ ++GGM+ +KQ+R L+ ++V+ TPGR+WE+MS L L +SF VLDEAD
Sbjct: 314 APYICSVLGGMAVQKQKRQLQV-ADIVIATPGRMWEVMSSDNSVLASLRNISFLVLDEAD 372
Query: 351 RMIENGHFRELQSIIDML--PMTNGSNEGQ-------------------SEQTQTCVTVS 389
R++++GHF+E + I L P +NE Q E+ +
Sbjct: 373 RLLKDGHFKEAEEIFKALDRPPVEENNEDQKMGGTDEEGQEEEEEDSEEEEEEEEEEEEE 432
Query: 390 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVD 449
KRQTL+FSAT + + ++KL G K K + +E L ++ R VD
Sbjct: 433 EEHVNKRQTLIFSAT--FNKNLQQKLA-GKSKFKAT--STQDMEYLLQKLNFRETPKFVD 487
Query: 450 LTNVSVLANKLEESFI 465
V +A L+E I
Sbjct: 488 ANPVHQMAENLKEGLI 503
>gi|330926678|ref|XP_003301562.1| hypothetical protein PTT_13094 [Pyrenophora teres f. teres 0-1]
gi|311323563|gb|EFQ90355.1| hypothetical protein PTT_13094 [Pyrenophora teres f. teres 0-1]
Length = 827
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 172/300 (57%), Gaps = 33/300 (11%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
AW+EL L ++ ++ +L F +PT IQK+ IP G+ D+IG A TGSGKTLAFG+PI
Sbjct: 259 AWDELELSEEMLGALAKLKFSKPTTIQKSTIPEIL-AGR-DVIGKASTGSGKTLAFGIPI 316
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV-AKGI-- 290
++ L R A K E+K ALII PTRELA Q+ HL + AKG
Sbjct: 317 IESYLASRSSASKDPEDK-----------MPIALIIAPTRELAHQINAHLIALCAKGDFD 365
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+ I GG+S +KQ R L+ + ++VVGTPGRLWE++S G+ L + + F V+DEAD
Sbjct: 366 PPYITSITGGLSVQKQRRQLE-KADIVVGTPGRLWEVISDGQGLLRKFKQIKFLVVDEAD 424
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNE-GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 409
R+ GHF+E+ I+ +L + ++E +S++ + KRQTLVFSAT
Sbjct: 425 RLFSEGHFKEMGEILKVLEPDDVTDENAESDEKEEI---------KRQTLVFSAT--FGK 473
Query: 410 DFRKKLKHGSLKLKQS--VNGLNSIETLSERAGMRANVAI-VDLTNVSVLANKLEESFIE 466
D +KKL G +K S ++ S+E L ++ R + +D +S +A+KL+E IE
Sbjct: 474 DLQKKLA-GKVKGGGSDLMSQQQSMEYLLKKLQFREEKPVFIDANPMSQMASKLQEGLIE 532
>gi|154274552|ref|XP_001538127.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|160409985|sp|A6R9U4.1|MAK5_AJECN RecName: Full=ATP-dependent RNA helicase MAK5
gi|150414567|gb|EDN09929.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 772
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 176/322 (54%), Gaps = 35/322 (10%)
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVD 214
+A EE V E+ + W+ L + + S+ +L F +PTPIQ ACIP A+ H D
Sbjct: 173 EALEEEVDGDEV--DVSGWDPLGISAEIQTSLSKLRFAKPTPIQTACIPLIASGH----D 226
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
++G A TGSGKTLAFG+PI++ L+ R + + E + KY ALI++PTRE
Sbjct: 227 VVGKASTGSGKTLAFGIPILEYYLKNRREE-PVQHNDAELSSKYPI-----ALILSPTRE 280
Query: 275 LALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
LA Q++ H+ + A IN R+ + GG+S +KQ+R+L A ++V+GTPGRLW+++S G
Sbjct: 281 LAHQLSKHITALCTNAPNINARIALLTGGLSVQKQQRVL-ANADIVIGTPGRLWDVISTG 339
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 391
L + + F V+DEADR++ GHF+E++ I+ L E + T +
Sbjct: 340 HGLLRKFQNIKFLVIDEADRLLSEGHFKEVEEILTAL----DRKEIHHKVTADSESEDDA 395
Query: 392 QRKK-RQTLVFSATIALSADFRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMRANV 445
R+ RQTLVFSAT F K L+ G ++ S+E L ++ R +
Sbjct: 396 SRESPRQTLVFSAT------FHKGLQQKLAGKGRYFDGDLLDDKQSMEYLLKKLNFREDR 449
Query: 446 A-IVDLTNVSVLANKLEESFIE 466
+D+ V+ +A L+E +E
Sbjct: 450 PKFIDVNPVAQMAENLKEGLVE 471
>gi|393212749|gb|EJC98248.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 718
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 147/257 (57%), Gaps = 36/257 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W++ LH L+ +++ F PTPIQ++ IP A +GK D++G A+TGSGKTLA+GLPI+
Sbjct: 120 WSDFSLHARLLSALHSQKFATPTPIQRSAIPVAL-KGK-DVVGVAQTGSGKTLAYGLPIL 177
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVA----- 287
LL+ G+ PKG L+AL++ PTRELALQVT+HLK
Sbjct: 178 NHLLQ----MGR-------------PKGKRPLQALVLAPTRELALQVTEHLKACVVEDAE 220
Query: 288 ---KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
V + +VGGM+ +KQ R+++ +++V TPGRLW+L+ +L TL F
Sbjct: 221 RRTGAPRVSIGTVVGGMAIQKQIRIIERGVDILVATPGRLWDLIEEDNSLSEQLRTLRFL 280
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE----QTQT-CVTVSSLQRKKRQTL 399
VLDEADRMIE GHF EL +II + + S E +T+T S + QT
Sbjct: 281 VLDEADRMIETGHFAELDNIIRLTTRQSKSTETDEAFMFGETETRGKNDESNEETPMQTF 340
Query: 400 VFSATIALSADFRKKLK 416
+FSAT LS D ++ LK
Sbjct: 341 IFSAT--LSRDLQQNLK 355
>gi|406696280|gb|EKC99572.1| ATP dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 779
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 162/308 (52%), Gaps = 37/308 (12%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
AW ++ LH L K + LGF PT IQK +P A +G+ D++G AET TLA+ LP+
Sbjct: 177 AWAKIPLHASLKKCLLGLGFANPTEIQKQAVPLAL-EGR-DVVGVAET----TLAYSLPV 230
Query: 234 MQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN- 291
+ LL + +AGK K L ALI+ PTRELA+QVTDHL V K +
Sbjct: 231 LSYLLRQPPPRAGK--------------KRPLSALILCPTRELAIQVTDHLTNVVKSVTP 276
Query: 292 -------VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
+ V +VGG+S KQ R+L +++V TPGRLW+L+ + L TL F
Sbjct: 277 EGAKVPRISVGSVVGGLSAHKQRRILDRGADILVATPGRLWDLVKTDDALAASLRTLRFL 336
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ----RKKRQTLV 400
++DEADRMIENGHF EL+ I+ + T E + + ++L+ R QT V
Sbjct: 337 IVDEADRMIENGHFAELEHIVQLSRRTQVQAEDEDDDPVFAQMATALEQAEPRDDLQTFV 396
Query: 401 FSATIALSADFRKKLKHGSLKLKQSVNGLNS-IETLSERAGMRANV-AIVDLTNVSVLAN 458
FSAT LS D ++ LK + + + S ++ L E R AIVDLT +
Sbjct: 397 FSAT--LSKDLQENLKKRRRRPLKRKSKRASTLDELLETLDFRDETPAIVDLTPKGNKVS 454
Query: 459 KLEESFIE 466
L E+ ++
Sbjct: 455 TLREAMVD 462
>gi|451851184|gb|EMD64485.1| hypothetical protein COCSADRAFT_37068 [Cochliobolus sativus ND90Pr]
Length = 823
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 174/321 (54%), Gaps = 39/321 (12%)
Query: 151 VSNGP-DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
++N P DD++EE VS AW +L L ++ ++ +L F +PT IQ + IP
Sbjct: 238 LANQPMDDSDEEDVS---------AWGKLDLSEEMLGALAKLKFSKPTNIQTSTIPEII- 287
Query: 210 QGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALII 269
G+ D+IG A TGSGKTLAFG+PI++ L G A K ALII
Sbjct: 288 AGR-DVIGKASTGSGKTLAFGIPIIESYL------------AGRAAPKDTKDKVPLALII 334
Query: 270 TPTRELALQVTDHL-KEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 326
PTRELA Q+ +HL K AKG + + I GG+S +KQ R L+ + ++VVGTPGRLWE
Sbjct: 335 APTRELAHQINEHLVKLCAKGDFDSPYIASITGGLSVQKQRRQLE-KADIVVGTPGRLWE 393
Query: 327 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 386
++S G+ L + + F V+DEADR++ GHF+E+ I+ +L + +E +E +T
Sbjct: 394 VISSGQGLLAKFKQIKFLVVDEADRLLSQGHFKEMDDILKVLEPDDEVDE-NAEPAET-- 450
Query: 387 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANV 445
RQTLVFSAT D ++KL + +N S+E L ++ R
Sbjct: 451 -----PEANRQTLVFSAT--FGKDLQRKLAGKAKFGGDQMNQQQSMEYLLKKLRFREEKP 503
Query: 446 AIVDLTNVSVLANKLEESFIE 466
+D S +A+KL+E IE
Sbjct: 504 KFIDANPTSQMASKLQEGLIE 524
>gi|302676285|ref|XP_003027826.1| hypothetical protein SCHCODRAFT_70633 [Schizophyllum commune H4-8]
gi|300101513|gb|EFI92923.1| hypothetical protein SCHCODRAFT_70633 [Schizophyllum commune H4-8]
Length = 651
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 143/263 (54%), Gaps = 38/263 (14%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC-IPAAAHQGKVDIIGAAETGSGK 225
+ T + W LHP L+K++ F +PTPIQ A IPA A + D++G A+TGSGK
Sbjct: 72 DTPTSLEEWEPYALHPQLLKTLQARNFLKPTPIQAAALIPALAGR---DVVGVAQTGSGK 128
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
TLA+GLPI+ LLE K+ GE K +RALI+ PTRELALQV+ HL
Sbjct: 129 TLAYGLPILHHLLENPHKSTT-----GE-------KRPVRALILAPTRELALQVSSHLNA 176
Query: 286 VAKGIN------------VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
+ V V +VGGMS +KQ+R+L +++V TPGRLW+++ +
Sbjct: 177 CLNTNSDAQTNAKKPPPPVSVAALVGGMSLQKQKRILGRGVDVLVATPGRLWDVIQEDDD 236
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 393
+ L F VLDEADRMIE GHF EL +++ + N +E + + +
Sbjct: 237 LARSIKNLKFLVLDEADRMIEAGHFAELDNVLRLTLRANKYDEREDDDENI--------Q 288
Query: 394 KKRQTLVFSATIALSADFRKKLK 416
QT VFSAT LS D ++ LK
Sbjct: 289 DGLQTFVFSAT--LSKDLQRNLK 309
>gi|401883813|gb|EJT48000.1| ATP dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 779
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 161/308 (52%), Gaps = 37/308 (12%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
AW ++ LH L K + LGF PT IQK +P A +G+ D++G AET TLA+ LP+
Sbjct: 177 AWAKIPLHASLKKCLLGLGFANPTEIQKQAVPLAL-EGR-DVVGVAET----TLAYSLPV 230
Query: 234 MQRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN- 291
+ LL + +AGK K L ALI+ PTRELA+QVTDHL V K +
Sbjct: 231 LSYLLRQPPPRAGK--------------KRPLSALILCPTRELAIQVTDHLTNVVKSVTP 276
Query: 292 -------VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
+ V +VGG+S KQ R+L +++V TPGRLW+L+ + L TL F
Sbjct: 277 EGAKVPRISVGSVVGGLSAHKQRRILDRGADILVATPGRLWDLVKTDDALAASLRTLRFL 336
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ----RKKRQTLV 400
++DEADRMIENGHF EL+ I+ + T E + + ++L+ R QT V
Sbjct: 337 IVDEADRMIENGHFAELEHIVQLSRRTQVQAEDEDDDPVFAQMATALEQAEPRDDLQTFV 396
Query: 401 FSATIALSADFRKKLKHGSLKLKQSVNGLNS-IETLSERAGMRANV-AIVDLTNVSVLAN 458
FSAT LS D ++ LK + + S ++ L E R AIVDLT +
Sbjct: 397 FSAT--LSKDLQENLKKRRRRPLKRKGKRASTLDELLETLDFRDETPAIVDLTPKGNKVS 454
Query: 459 KLEESFIE 466
L E+ ++
Sbjct: 455 TLREAMVD 462
>gi|408393250|gb|EKJ72515.1| hypothetical protein FPSE_07152 [Fusarium pseudograminearum CS3096]
Length = 781
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 183/354 (51%), Gaps = 46/354 (12%)
Query: 119 KEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNEL 178
K+ E+ +K +G +K + G + ++G D ++E V A AW L
Sbjct: 174 KQDEQLVKAAQGVQKSSTRGGNTFGAL------ADGNDYKDQEDVDMA-------AWVSL 220
Query: 179 RLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
L P ++ +I +L F +PT IQK IP A H D+IG A+TGSGKTLAFG+P+++R
Sbjct: 221 NLSPQIISAIAKLKFMKPTKIQKRTIPEIVAGH----DVIGKAQTGSGKTLAFGIPMVER 276
Query: 237 LLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--RV 294
LE +E+ K + P +L+++PTRELA Q+ DHLK + G+ V
Sbjct: 277 WLEMQEQGVK----------RTGPM----SLVLSPTRELAKQLGDHLKALCDGLPSAPYV 322
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG+S KQ+R L+ + ++V+GTPGRLWE++SG + + F V+DEADR+ +
Sbjct: 323 CVVTGGLSILKQQRQLE-KADIVIGTPGRLWEVLSGDRALQSKFAKIRFLVVDEADRLFK 381
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK--KRQTLVFSATIALSADFR 412
G F+E + II L +G + G +++ + RQTLVFSAT D +
Sbjct: 382 VGQFKEAEDIIGAL---DGKSPGDDAESEEESEDEDEDDEGAARQTLVFSAT--FDKDLQ 436
Query: 413 KKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
KL K K S N + L + R +D+ VS +A L E IE
Sbjct: 437 TKLAG---KGKSSGNDDEKMAYLMKCLKFRGEPKFIDVNPVSQMAEGLREGLIE 487
>gi|171682200|ref|XP_001906043.1| hypothetical protein [Podospora anserina S mat+]
gi|170941059|emb|CAP66709.1| unnamed protein product [Podospora anserina S mat+]
Length = 761
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 173/317 (54%), Gaps = 38/317 (11%)
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
PD EE V +E W L L P L+ +I L F +PTPIQ IP + D
Sbjct: 176 PDIEPEEDVDTSE-------WAPLELSPDLVAAIGNLRFGKPTPIQARAIPEIINGH--D 226
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
+IG A TGSGKTLAFG+PI+++ L + + +G E EK P A+I++PTRE
Sbjct: 227 VIGKASTGSGKTLAFGIPIVEKWLAK--------QAEGNEDEKKHPI----AMILSPTRE 274
Query: 275 LALQVTDHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 332
LA Q++DHLK+++ G+ + + + GG++ +KQ R L+ + ++++GTPGRLWE++S
Sbjct: 275 LAHQISDHLKKLSDGLTESPYICSVTGGLAIQKQLRQLE-KADIIIGTPGRLWEVISTEI 333
Query: 333 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 392
+ + + F V+DEADR++++G F+E + II L T E + +
Sbjct: 334 AVMNSIRQIDFLVVDEADRLLKDGQFKEAEDIIKALDRTRPGEEAEEDSDS---DEEPTP 390
Query: 393 RKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLN---SIETLSERAGMR-ANVAIV 448
+ RQTLVFSAT F K L+ L K N + S+E L ++ R A +
Sbjct: 391 KHNRQTLVFSAT------FNKALQQ-KLAGKARYNLMGEAESLEHLLKKLNFREAKPKFI 443
Query: 449 DLTNVSVLANKLEESFI 465
D VS +A+KL+E I
Sbjct: 444 DANPVSQMADKLKEGLI 460
>gi|410516913|sp|Q4IBS2.2|MAK5_GIBZE RecName: Full=ATP-dependent RNA helicase MAK5
Length = 781
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 183/354 (51%), Gaps = 46/354 (12%)
Query: 119 KEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNEL 178
K+ E+ +K +G +K + G + ++G D ++E V A AW L
Sbjct: 174 KQDEQLVKAAQGVQKSSTRGGNTFGAL------ADGNDYKDQEDVDMA-------AWVSL 220
Query: 179 RLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
L P ++ +I +L F +PT IQK IP A H D+IG A+TGSGKTLAFG+P+++R
Sbjct: 221 NLSPQIISAIAKLKFMKPTKIQKRTIPEIVAGH----DVIGKAQTGSGKTLAFGIPMVER 276
Query: 237 LLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI--NVRV 294
LE +E+ K + P +L+++PTRELA Q+ DHLK + G+ V
Sbjct: 277 WLEMQEQGVK----------RTGPM----SLVLSPTRELAKQLGDHLKALCDGLPSAPYV 322
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG+S KQ+R L+ + ++V+GTPGRLWE++SG + + F V+DEADR+ +
Sbjct: 323 CVVTGGLSILKQQRQLE-KADIVIGTPGRLWEVLSGDRALQSKFAKIRFLVVDEADRLFK 381
Query: 355 NGHFRELQSIIDMLPMTNGSNEG--QSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 412
G F+E + II L +G + G + ++ + RQTLVFSAT D +
Sbjct: 382 VGQFKEAEDIIGAL---DGKSPGDDAESEEESDEEDEDDEDAARQTLVFSAT--FDKDLQ 436
Query: 413 KKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
KL K K S N + L + R +D+ VS +A L E IE
Sbjct: 437 TKLAG---KGKSSGNDDEKMAYLMKCLKFRGEPKFIDVNPVSQMAEGLREGLIE 487
>gi|46121917|ref|XP_385512.1| hypothetical protein FG05336.1 [Gibberella zeae PH-1]
Length = 783
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 183/354 (51%), Gaps = 46/354 (12%)
Query: 119 KEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNEL 178
K+ E+ +K +G +K + G + ++G D ++E V A AW L
Sbjct: 174 KQDEQLVKAAQGVQKSSTRGGNTFGAL------ADGNDYKDQEDVDMA-------AWVSL 220
Query: 179 RLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
L P ++ +I +L F +PT IQK IP A H D+IG A+TGSGKTLAFG+P+++R
Sbjct: 221 NLSPQIISAIAKLKFMKPTKIQKRTIPEIVAGH----DVIGKAQTGSGKTLAFGIPMVER 276
Query: 237 LLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--RV 294
LE +E+ K + P +L+++PTRELA Q+ DHLK + G+ V
Sbjct: 277 WLEMQEQGVK----------RTGPM----SLVLSPTRELAKQLGDHLKALCDGLPSAPYV 322
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG+S KQ+R L+ + ++V+GTPGRLWE++SG + + F V+DEADR+ +
Sbjct: 323 CVVTGGLSILKQQRQLE-KADIVIGTPGRLWEVLSGDRALQSKFAKIRFLVVDEADRLFK 381
Query: 355 NGHFRELQSIIDMLPMTNGSNEG--QSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 412
G F+E + II L +G + G + ++ + RQTLVFSAT D +
Sbjct: 382 VGQFKEAEDIIGAL---DGKSPGDDAESEEESDEEDEDDEDAARQTLVFSAT--FDKDLQ 436
Query: 413 KKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
KL K K S N + L + R +D+ VS +A L E IE
Sbjct: 437 TKLAG---KGKSSGNDDEKMAYLMKCLKFRGEPKFIDVNPVSQMAEGLREGLIE 487
>gi|367029791|ref|XP_003664179.1| hypothetical protein MYCTH_2306707 [Myceliophthora thermophila ATCC
42464]
gi|347011449|gb|AEO58934.1| hypothetical protein MYCTH_2306707 [Myceliophthora thermophila ATCC
42464]
Length = 785
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 160/298 (53%), Gaps = 31/298 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W L L P ++ +I RL F +PT IQ IP + D+IG A TGSGKTLAFG+PI+
Sbjct: 203 WVPLGLSPQVLSAIARLKFAKPTAIQAKAIPHIMNGH--DLIGKAATGSGKTLAFGIPIV 260
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV-- 292
+ L R +A + +K P ALI++PTRELA Q+ DHLKE+ G+
Sbjct: 261 ESWLARRAEA--------QTTDKKQPI----ALILSPTRELAHQIRDHLKELCAGLTTGP 308
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
V + GG++ +KQ+R + + +++VGTPGR+WEL S L L +SF V+DEADR+
Sbjct: 309 YVCSVTGGLAVQKQQRQFE-KADILVGTPGRMWELASSSNSVLGALRGISFLVVDEADRL 367
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 412
+++GHF+E + I++ L E ++ + R RQTLVFSAT F
Sbjct: 368 LKDGHFKEAEEIMNALDRKAPGEEVVEDEGDSD---DETPRHNRQTLVFSAT------FN 418
Query: 413 KKLKHGSLKLKQSVNGLN---SIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
K L+ L K N + S+E L ++ R VD VS +A L E I+
Sbjct: 419 KNLQQ-KLAGKARYNLMGDAESLEYLLKKLNFREPRPKFVDTNPVSQMAENLREGLIQ 475
>gi|440296216|gb|ELP89056.1| ATP-dependent RNA helicase mak5, putative [Entamoeba invadens IP1]
Length = 606
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 151/263 (57%), Gaps = 51/263 (19%)
Query: 155 PDDAEEELVSEAEISTEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKV 213
P+ EEE +S+A++ E W +L ++ +++++Y LGF PT IQK IP A K
Sbjct: 44 PNAMEEEPISDADLYIEMKEWRKLYKIDITILRALYDLGFIYPTEIQKFAIPKALTSQK- 102
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL---RALIIT 270
D+IG+A TGSGKTL+F +P++QR +E KG + LI+
Sbjct: 103 DLIGSAPTGSGKTLSFLIPLVQRFIE---------------------KGTFDTTQCLILV 141
Query: 271 PTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 329
PTRELA+Q+ DHL+++ K + V +VGG+++ KQ RLL P +V+GTPGR++EL +
Sbjct: 142 PTRELAVQIRDHLQKLTKYLPRVTSCVVVGGLASVKQVRLLLQEPTIVIGTPGRIFELYN 201
Query: 330 GGEKHLVE-LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTV 388
+ +++ L +L + V+DEADRM+E GHF EL+ + VTV
Sbjct: 202 NQDTPVLKTLPSLPYLVVDEADRMVEPGHFSELKDL---------------------VTV 240
Query: 389 SSLQRKKRQTLVFSATIALSADF 411
S ++QT VFSAT+ L+A+
Sbjct: 241 VS--NAEKQTFVFSATMQLAAEM 261
>gi|255932267|ref|XP_002557690.1| Pc12g08600 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582309|emb|CAP80487.1| Pc12g08600 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 719
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 171/301 (56%), Gaps = 28/301 (9%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA--AHQGKVDIIGAAETGSGKTLAFGL 231
AW+ L L P ++ ++ F P+ IQKA IPA H D++G A TGSGKTLAFG+
Sbjct: 141 AWDGLNLSPETFTALSKMKFSSPSAIQKASIPAILDGH----DVVGKASTGSGKTLAFGI 196
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKY-APKGHLRALIITPTRELALQVTDHLKEV---A 287
PI++ L++R K E + +++EK +P ALI++PTRELA Q+ H+ E+ +
Sbjct: 197 PIIEHYLDQRGKQ----EGQSDKSEKNKSPI----ALILSPTRELAHQLGKHIGELIANS 248
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
N RV I GGMS +KQ+R L A ++V+GTPGR+WE++S G + ++ + F V+D
Sbjct: 249 PDTNARVALITGGMSIQKQQRQL-ATADIVIGTPGRVWEILSTGTGLIRKMQKIQFLVVD 307
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADR++ GHF+E++ I++ L + ++ + S+ RQTLVFSAT
Sbjct: 308 EADRLLSEGHFKEMEHILNALDKHQAGDIADMDEEEEEEEPSN-----RQTLVFSAT--F 360
Query: 408 SADFRKKLKHGS-LKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFI 465
D ++KL S + ++ S+E L ++ R +D+ S +A L+E +
Sbjct: 361 HKDLQQKLAGKSRWTSGEMLDNKESMEYLLKKLNFREEKPKFIDVNPESQMAVGLKEGIV 420
Query: 466 E 466
E
Sbjct: 421 E 421
>gi|254574120|ref|XP_002494169.1| Essential nucleolar protein, putative DEAD-box RNA helicase
[Komagataella pastoris GS115]
gi|238033968|emb|CAY71990.1| Essential nucleolar protein, putative DEAD-box RNA helicase
[Komagataella pastoris GS115]
gi|328354012|emb|CCA40409.1| similar to ATP-dependent RNA helicase [Komagataella pastoris CBS
7435]
Length = 758
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 149/460 (32%), Positives = 210/460 (45%), Gaps = 73/460 (15%)
Query: 34 NSLKWNSSFSAADNDPFAFLVGSNELDG-GFLSLEEIDEASYNLQIPKPEKGKPGKKTNT 92
+SLKW D F L G E+DG G + I ++ + + + K T+
Sbjct: 44 SSLKWKPVEIPETLDDFQGLFGVEEIDGVGVV----IKNGEIKFEVKEDHENETVKDTDQ 99
Query: 93 KKRKRSSANEEDPGDGDGDEDGNGVQKE-----QEKNLKNQKGKKKKKKKKGKKIKTVEE 147
+ + DG D+ E EK ++ G K KK K K +K V++
Sbjct: 100 MSDDDEVFQDAESLDGREDDQNEPENFELDSVSTEKVPESTPGVKSNKKVKRKDVKEVKK 159
Query: 148 SVTVSNGPDDAEEELVSEAEISTEFDA-----------WNELRLHPLLMKSIYRLGFKEP 196
+ D E++ E + +F W E L P + +S+ LGF EP
Sbjct: 160 DEDQEDLEDAGSEQVPMEEDGHFKFSQMKMPEDVDLPLWPE-GLSPFVRQSLSILGFNEP 218
Query: 197 TPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAE 256
TPIQ IP A GK DIIG A TGSGKTLA+G+P++++ L E
Sbjct: 219 TPIQNEAIPLAI-SGK-DIIGKAITGSGKTLAYGIPLIEKYLTR------------ESRS 264
Query: 257 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR---VVPIVGGMSTEKQERLLKAR 313
K AP ++ PTRELA QV HLKE+AK + V+ + GG+S ++Q+RLL
Sbjct: 265 KQAPPA---GIVFAPTRELAHQVVKHLKEIAKDSPLTEHGVISVTGGLSIQRQQRLLDYG 321
Query: 314 PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 373
P ++V TPGR EL+ + L ++ VLDEADR++++GHF EL+ I+ L
Sbjct: 322 PGIIVATPGRFLELLESSNELATRLASVEVLVLDEADRLLQDGHFDELEKILSSLKKMRP 381
Query: 374 SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVN---GL- 429
N +QR QTLVFSAT F K+L G L K N GL
Sbjct: 382 HN---------------IQR--WQTLVFSAT------FSKEL-FGKLGSKYRWNEDQGLA 417
Query: 430 ---NSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
IE L +R R +VD V+ N++ E+ IE
Sbjct: 418 EDEQIIELLGKRLRFRQKPTLVDTNPTEVVTNQVREALIE 457
>gi|393245470|gb|EJD52980.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 736
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 145/277 (52%), Gaps = 36/277 (12%)
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAA 219
E V+ + + W LH L +++ F PT IQ IP A +G+ DIIG A
Sbjct: 122 EPFVTAFDTKGQLPEWAPFNLHAQLAAALHHKKFASPTSIQSQAIPKAV-EGR-DIIGVA 179
Query: 220 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQV 279
ETGSGKTLA+GLPI+ LL + + KG +RAL++ PTRELALQV
Sbjct: 180 ETGSGKTLAYGLPILHHLL----TTPRPPKSKGRRP--------VRALVLAPTRELALQV 227
Query: 280 TDHLKEV------------------AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTP 321
HLK AK V V IVGGMS +KQ R+L+ +++V TP
Sbjct: 228 AAHLKACLVDPIKKEEDTDDKPKGPAKPPAVSVAAIVGGMSAQKQRRVLERGVDVLVATP 287
Query: 322 GRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQ 381
GRLW+++S + +++ L F VLDEADRMI+ GHF EL +I+ + + E +
Sbjct: 288 GRLWDILSEDDALALQIKRLKFLVLDEADRMIQAGHFAELDNILKLTVRVDMPEEDAHDA 347
Query: 382 TQTCVTVSSLQRKKR--QTLVFSATIALSADFRKKLK 416
+ SS + K QT VFSAT LS D ++ LK
Sbjct: 348 LEDFKKASSAEGKNEDVQTFVFSAT--LSKDLQRNLK 382
>gi|342886208|gb|EGU86105.1| hypothetical protein FOXB_03374 [Fusarium oxysporum Fo5176]
Length = 774
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 187/366 (51%), Gaps = 48/366 (13%)
Query: 111 DEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEIST 170
D +G +KE E+ K K +K + G + ++ D A++E V A
Sbjct: 153 DGKNSGTKKEDEQLDKASKVVQKSSARGGNTFGAL------ADANDYADQEDVDMA---- 202
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
AW L L P ++ +I +L F +PT IQ+ IP D+IG A+TGSGKTLAFG
Sbjct: 203 ---AWVPLNLSPQILSAIAKLKFTKPTLIQEKTIPEILAGD--DVIGKAQTGSGKTLAFG 257
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
+P+++R LE L+E+G E+ P A++++PTRELA Q+ DHLK + G+
Sbjct: 258 IPMVERWLE--------LQEQG--VERTGP----MAVVLSPTRELAKQLGDHLKALCDGL 303
Query: 291 --NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
V + GG+S +KQ+R L+ + ++V+GTPGRLWE++SG + + F V+DE
Sbjct: 304 PSAPYVCVVTGGLSIQKQQRQLE-KADIVIGTPGRLWEVLSGDRALQSKFAKIKFLVVDE 362
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEG--------QSEQTQTCVTVSSLQRKKRQTLV 400
ADR+ + G F+E + II L +G + G ++ + R RQTLV
Sbjct: 363 ADRLFKVGQFKEAEDIIGAL---DGKSPGDDAESSDEDEDEDEDDDDEEDDDRNARQTLV 419
Query: 401 FSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKL 460
FSAT D + KL K K + N + L + R +D+ VS +A L
Sbjct: 420 FSAT--FDKDLQTKLAG---KGKSTGNDEEKMAYLMKCLKFRGEPKFIDVNPVSQMAQGL 474
Query: 461 EESFIE 466
+E IE
Sbjct: 475 KEGLIE 480
>gi|398403739|ref|XP_003853336.1| hypothetical protein MYCGRDRAFT_41129 [Zymoseptoria tritici IPO323]
gi|339473218|gb|EGP88312.1| hypothetical protein MYCGRDRAFT_41129 [Zymoseptoria tritici IPO323]
Length = 793
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/316 (38%), Positives = 174/316 (55%), Gaps = 42/316 (13%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDI 215
AE+ S A++S AW L+L P M ++ L F +PT IQK IP A H D+
Sbjct: 200 AEDANDSAADVS----AWRPLKLCPDTMAALAALKFSKPTAIQKFVIPEVLAGH----DV 251
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 275
IG A TGSGKTLAFG+PI++R LE A G+ A K AP ALI++PTREL
Sbjct: 252 IGKASTGSGKTLAFGIPILERFLESAVGA------DGKRA-KRAP----LALILSPTREL 300
Query: 276 ALQVTDHLKEV-AKGINVR--VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 332
A+Q+ HL + + G++ R + + GGMS +KQ+R LK ++VV TPGRLWE++ G
Sbjct: 301 AVQLDQHLTSLCSSGLSRRPWIATLTGGMSIQKQQRQLK-DADIVVATPGRLWEIIESGR 359
Query: 333 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 392
L + F V+DEADR++ G F+E++ I++ L + + EG E +T
Sbjct: 360 GTAAMLKQIEFLVIDEADRLLSEGQFKEVEEILNSLDRVDDA-EGAEEGDET-------- 410
Query: 393 RKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLN-SIETLSERAGMR-ANVAIVDL 450
RQTLVFSAT + +KKL G + + ++ G S+E L + R +D
Sbjct: 411 ---RQTLVFSATFDRA--LQKKLV-GKVNRQSALMGSKESMEYLLGKLNFREEEPKFIDA 464
Query: 451 TNVSVLANKLEESFIE 466
V+ LA+ L E IE
Sbjct: 465 NPVNQLASGLREGLIE 480
>gi|451996154|gb|EMD88621.1| hypothetical protein COCHEDRAFT_1181781 [Cochliobolus
heterostrophus C5]
Length = 742
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 164/298 (55%), Gaps = 31/298 (10%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
AW +L L ++ ++ +L F EPT IQ + IP G+ D+IG A TGSGKTLAFG+PI
Sbjct: 172 AWAKLDLSEEMLGALAKLKFSEPTDIQASTIPEII-AGR-DVIGKASTGSGKTLAFGIPI 229
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL-KEVAKG--I 290
++ L R A K ++K P ALII PTRELA Q+ +HL K AKG
Sbjct: 230 IESYLTRR-AASKDTKDK-------VP----LALIIAPTRELAHQINEHLVKLCAKGEFD 277
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+ + I GG+S +KQ R L+ + ++VVGTPGRLWE++S G+ L + + F V+DEAD
Sbjct: 278 SPYIASITGGLSVQKQRRQLE-KADIVVGTPGRLWEVISSGQGLLAKFKQIKFLVVDEAD 336
Query: 351 RMIENGHFRELQSIIDML-PMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 409
R++ GHF+E+ I+ +L P + E+T RQTLVFSAT
Sbjct: 337 RLLSQGHFKEMDDILKVLEPDDEVDENAEPEETPEA---------NRQTLVFSAT--FGK 385
Query: 410 DFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 466
D ++KL + +N S+E L ++ R +D S +A+KL+E IE
Sbjct: 386 DLQRKLAGKAKFGGDQMNQQQSMEYLLKKLRFREEKPKFIDTNPTSQMASKLQEGLIE 443
>gi|340507841|gb|EGR33722.1| hypothetical protein IMG5_042580 [Ichthyophthirius multifiliis]
Length = 729
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 123/192 (64%), Gaps = 16/192 (8%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
+HPL+ +S+ F PT IQ + H D + A++TGSGKTL+FG+PIM +L
Sbjct: 16 IHPLINQSLLECNFDTPTDIQAYVLSCYKHYN--DFLVASQTGSGKTLSFGIPIMSEILF 73
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN--VRVVPI 297
++E +E +K P+ +++ LI+ PTREL LQ+ +HL ++ K +RV I
Sbjct: 74 DKE----------DEKDK-KPQNYIKCLILAPTRELVLQIENHLNQINKHSKNLIRVGSI 122
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFFVLDEADRMIENG 356
VGG+S EKQ R+L P++++ TPGRLW+++ E ++ L+ + +FV+DEADRM+E G
Sbjct: 123 VGGISKEKQRRILSYIPDILIATPGRLWDMIENYEHDCLKRLNQIKYFVIDEADRMVELG 182
Query: 357 HFRELQSIIDML 368
HF+EL +IID +
Sbjct: 183 HFKELDNIIDQI 194
>gi|320581609|gb|EFW95829.1| Essential nucleolar protein, putative DEAD-box RNA helicase
[Ogataea parapolymorpha DL-1]
Length = 705
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 157/294 (53%), Gaps = 44/294 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+ L L ++ + +LGF++PT IQKA IP A GK D+IG A TGSGKTLA+G+PI+
Sbjct: 160 WSSLNLSASTLQGLQKLGFQKPTEIQKATIPLAV-DGK-DVIGKAITGSGKTLAYGIPIL 217
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR- 293
++ L +++ HL +I TPTRELA QV HL+E+ K
Sbjct: 218 EKALSNKQE-------------------HLNGIIFTPTRELANQVMKHLQELFKYTPFHD 258
Query: 294 --VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
V+ + GG+S +KQERLL +P +VV TPGR E++ ++ V+L + V DEADR
Sbjct: 259 KAVISLTGGLSIQKQERLLGYKPRVVVATPGRFLEILEKKTENAVQLASADILVCDEADR 318
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 411
++++GHF EL I+++L +G K Q+LVFSAT S D
Sbjct: 319 LLQDGHFDELGKILEILHNHRPKVQGH----------------KFQSLVFSAT--FSQDL 360
Query: 412 RKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
KL+ + S + ++ LS+ R+ VD+ ++A+ + E+ I
Sbjct: 361 FGKLEKAKKHVFDSEQAI--VKMLSKHLKFRSKPEYVDVNPTEIVAHSITEAMI 412
>gi|429855665|gb|ELA30611.1| ATP-dependent RNA helicase mak5 [Colletotrichum gloeosporioides
Nara gc5]
Length = 749
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 166/299 (55%), Gaps = 39/299 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLP 232
W +L L P ++ +I +L F +P+ IQK+ IP A H D+IG A TGSGKTLAF +P
Sbjct: 192 WIDLGLSPAIVSAIAKLKFTKPSNIQKSSIPEILAGH----DVIGKASTGSGKTLAFSIP 247
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
I++ +E K + GE+ ++AP ALI++PTRELA Q+T+H+K + G+
Sbjct: 248 IVEDWIE------KFDAKDGEKDTEHAPT----ALILSPTRELAHQITNHIKNLCAGLTN 297
Query: 293 R--VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
V + GG+S KQ+R L A+ ++V+GTPGRLWE++S + L + + V+DEAD
Sbjct: 298 APFVCSVTGGLSVFKQQRQL-AKADIVIGTPGRLWEVISSSTELLSGFKKIRYLVVDEAD 356
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALS 408
R++ GHF+E I+D L +E + +Q T RQTLVFSAT L
Sbjct: 357 RLLSEGHFKEAGEILDALD-REALDEDEDKQNLT----------PRQTLVFSATFHKGLQ 405
Query: 409 ADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
K K G + ++ S+E L +R R ++D+ V+ +A L+E IE
Sbjct: 406 QKLAGKGKWGLMSEEE------SMEYLLKRLNFREEKPKLIDVNPVAQMAAGLKEGLIE 458
>gi|170100044|ref|XP_001881240.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643919|gb|EDR08170.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 616
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 148/272 (54%), Gaps = 48/272 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W++ LHP L ++++ F PTPIQ+A +P A G+ D+IG A+TGSGKTLA+GLPI+
Sbjct: 31 WHKYSLHPQLSRALHAKSFLSPTPIQEAALPMAL-AGR-DVIGVAQTGSGKTLAYGLPIL 88
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI---- 290
+L + + + K K LRAL++ PTRELALQV+ HL + +
Sbjct: 89 HHILSQPKPSPKT-------------KRPLRALVLAPTRELALQVSSHLNALLNHLEDFS 135
Query: 291 -------------------------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 325
+V V IVGGMS++KQ R+L ++++ TPGRLW
Sbjct: 136 SEKTVKNSSKPATTDGKTPAKKPPPHVSVAAIVGGMSSQKQRRILDRGVDVLIATPGRLW 195
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS--NEGQSEQTQ 383
+LM + E+ + F VLDEADRMIE GHF EL++I+ + + ++G+ +
Sbjct: 196 DLMEDDDTLAREIKNIRFLVLDEADRMIEAGHFAELENILRLTLRESACFNDDGEPIHVE 255
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFRKKL 415
+ +++ QT VFSAT LS D ++ L
Sbjct: 256 EEDSKEGIKKDDLQTFVFSAT--LSKDLQRNL 285
>gi|406602865|emb|CCH45589.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 775
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 159/305 (52%), Gaps = 49/305 (16%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW+ L L ++ + L F +PTPIQK CIP + DIIG A TGSGKTLA+G
Sbjct: 202 DLPAWSNLDLSTYTLQGLSHLNFTKPTPIQKKCIPICSEGN--DIIGKASTGSGKTLAYG 259
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
+PI++RL+ ++ P G +I TPTRELA QV DHL +++K
Sbjct: 260 IPILERLVSLKDPK--------------FPAG----VIFTPTRELAHQVVDHLNKISKFF 301
Query: 291 ---NVRVVPIVGGMSTEKQERLLKARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
++ + GG+S +KQER+LK +++V TPGR EL+ + ++ L V
Sbjct: 302 PSHQSSILSLTGGLSIQKQERILKYENSGQIIVATPGRFLELIERNGEFAKKVSNLEILV 361
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
LDEADR++++GHF E + I+ +L + + ++ K Q+LVFSAT
Sbjct: 362 LDEADRLLQDGHFDEFEQILKIL------------------STNRTKQDKWQSLVFSATF 403
Query: 406 ALSADFRKKLKHGSLKLKQSVNGLNS----IETLSERAGMRANVAIVDLTNVSVLANKLE 461
A+ + KL H K K + L+ I+ L+E+ +DL LAN++
Sbjct: 404 AV--ELFSKLVHQGYKPKDEPSKLDEREQIIKILNEKIKFSKKPEFIDLNPNQKLANEIT 461
Query: 462 ESFIE 466
E+ +E
Sbjct: 462 ETMVE 466
>gi|164658650|ref|XP_001730450.1| hypothetical protein MGL_2246 [Malassezia globosa CBS 7966]
gi|159104346|gb|EDP43236.1| hypothetical protein MGL_2246 [Malassezia globosa CBS 7966]
Length = 502
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 157/303 (51%), Gaps = 40/303 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACI-PAAAHQGKV--DIIGAAETGSGKTLAFGL 231
W LHP L ++ LGF +PT +Q A + P+ + + D++G A+TGSGKTLA+ L
Sbjct: 201 WASYALHPQLKMALKSLGFHKPTDVQAATLRPSLGLESSMPRDVVGIAQTGSGKTLAYAL 260
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV--AKG 289
PI+ +LE A + L ALI+TPTRELALQV H++ V A G
Sbjct: 261 PILHYVLEH-------------SAHTEDTQRDLEALILTPTRELALQVCTHIRAVVDAAG 307
Query: 290 INVRVVPIVGGMSTEKQERLLKAR--PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
V + GGMS +KQER+L+ ++V TPGRLW+L+ + + + F V+D
Sbjct: 308 RFANVATVCGGMSVQKQERMLQQHGGAHVIVATPGRLWDLLKQDDALALRVRRTRFLVID 367
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADRMIE GHF E+ SI+ M+ T G+ + QT V+SAT +
Sbjct: 368 EADRMIETGHFAEMDSILSMVRRTKGAVADANSAM--------------QTFVYSAT--M 411
Query: 408 SADFRKKLKHGSLKLKQ---SVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEES 463
+ + LK + KQ + + N+++ L R R +++LT +A+ L E+
Sbjct: 412 TKTLQANLKRAPWRKKQRTAASSNNNTLDDLLARIDFRDPEPVVIELTPQRHVADTLYEA 471
Query: 464 FIE 466
IE
Sbjct: 472 KIE 474
>gi|396475407|ref|XP_003839779.1| similar to ATP-dependent RNA helicase MAK5 [Leptosphaeria maculans
JN3]
gi|312216349|emb|CBX96300.1| similar to ATP-dependent RNA helicase MAK5 [Leptosphaeria maculans
JN3]
Length = 826
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 168/301 (55%), Gaps = 29/301 (9%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
+ AW EL L ++ ++ +L F++PT IQ + IP D+IG A TGSGKTLAF
Sbjct: 246 VDVSAWEELNLSEQVLDALAKLNFQKPTEIQASTIPEI--MAGRDVIGKASTGSGKTLAF 303
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA-K 288
G+PI++ L + ++++ + P ALI+ PTRELA Q+T HL + K
Sbjct: 304 GIPIIESFLSAQPGL--------KDSKDHTPI----ALIVAPTRELAHQITAHLIALCTK 351
Query: 289 G-INV-RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
G N + I GG+S +KQ R L+ + ++VVGTPGRLWE++S G+ L + + F V+
Sbjct: 352 GDFNAPHIASITGGLSVQKQRRQLE-KADIVVGTPGRLWEVISTGQGLLEKFKQIRFLVI 410
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
DEADR++ +GH++EL I+ +L + + +G+++ + RQTLVFSAT
Sbjct: 411 DEADRLLSDGHYQELGDILKILEPDSEAVDGENDDATPELN--------RQTLVFSATFG 462
Query: 407 LSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFI 465
S ++KL S K ++ S+E L ++ R +D S +ANKL+E I
Sbjct: 463 KS--LQQKLAGKSRPDKAEMSQQASMEYLLKKLKFREEKPKFIDANPNSQMANKLKEGLI 520
Query: 466 E 466
E
Sbjct: 521 E 521
>gi|320592957|gb|EFX05366.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 855
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 167/311 (53%), Gaps = 29/311 (9%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGL 231
AW L + P L+ + RL F +P+ IQ A IP A H D+IG A TGSGKTLAF +
Sbjct: 187 AWVPLDIVPPLLSCLARLKFSKPSAIQAATIPEILAGH----DVIGKASTGSGKTLAFAI 242
Query: 232 PIMQRLLEE--REKAGKMLEEKGEEAE-----KYAPKGHLRALIITPTRELALQVTDHLK 284
PI+QR L E E+ K E G++ K P AL+++PT ELA Q+T H+K
Sbjct: 243 PIVQRWLAEGGAERRQKKTEADGDKDADGDTPKKRPVCRPTALVLSPTGELAHQITTHIK 302
Query: 285 EVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
E+ + V + GG+S KQ+R L+ + ++VVGTPGRLWE++S + L ++
Sbjct: 303 ELCAALPSYPYVCAVTGGLSVFKQQRQLE-KADIVVGTPGRLWEVLSTSKPLLEAFRSID 361
Query: 343 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR-----KKRQ 397
F V+DEADR++ +GHF+E + I++ L T +EG+ + + + K RQ
Sbjct: 362 FLVVDEADRLLSDGHFKEAEEILEALDRTE-VDEGEGKGEDEAEDENEAELETPPPKPRQ 420
Query: 398 TLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSV 455
TLVFSAT L K ++ + KQS++ L E + +D+ VS
Sbjct: 421 TLVFSATFNRGLQQKLAGKSRYDLMDQKQSMDHLMKRLNFREESPQ-----FIDVNPVSQ 475
Query: 456 LANKLEESFIE 466
+A +L E +E
Sbjct: 476 MAERLREGMVE 486
>gi|308498215|ref|XP_003111294.1| hypothetical protein CRE_03826 [Caenorhabditis remanei]
gi|308240842|gb|EFO84794.1| hypothetical protein CRE_03826 [Caenorhabditis remanei]
Length = 761
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 187/369 (50%), Gaps = 70/369 (18%)
Query: 118 QKEQEKNLKNQK------GKKKKKKKKGKKIKTVEESVTVSN------GPDDAEEELVSE 165
QK +E+ N+K K+K+K+ + K ++ +EE V S G E +
Sbjct: 87 QKRKEQMAANRKQKKERLAKRKQKESEAKLVEPIEEKVKKSGETKKRKGEKSEESGKSKK 146
Query: 166 AEISTEFDAWNELRLHP-LLMKSIYRLGF----------------KEPTPIQKACIPAAA 208
++ T+ AW + P +++++ ++GF EPTPIQ A +P A
Sbjct: 147 SKKETDISAWKQFFFLPNEILQAVEQMGFVSCAELTKLSKFLFSFSEPTPIQSAVLPVAV 206
Query: 209 --HQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 266
HQ D++GAAETGSGKTLAFG+PI+ RLLE E EE E P RA
Sbjct: 207 RDHQ---DVLGAAETGSGKTLAFGIPIVARLLESS-------AENDEEEEFKGP----RA 252
Query: 267 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL-KARPELVVGTPGRLW 325
L+I PTREL +Q+ H+ + +++ IVGG++ KQ+R++ + RP++VV TPGRLW
Sbjct: 253 LVIAPTRELVIQIMRHITALIAPTSLKATSIVGGLAQVKQDRVISQQRPDIVVATPGRLW 312
Query: 326 ELMSGGEK--HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
+M E+ +L E L V+DE DRM+E G+F EL I+ N E
Sbjct: 313 AMMQEAEEGDYLAEWKNLKCLVVDETDRMVEEGYFAELTHIL---------NRVHEES-- 361
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
++K QTLVFSAT+ + + + K + ++ I+ L + G+R
Sbjct: 362 --------DKEKLQTLVFSATLTFAK--AQDVAEEEKKKAKELSSQQKIQRLIKLTGLRE 411
Query: 444 NV-AIVDLT 451
N ++DLT
Sbjct: 412 NKHKVIDLT 420
>gi|407919561|gb|EKG12791.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 735
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 163/302 (53%), Gaps = 29/302 (9%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGL 231
AWN L L M +I +L F PT IQ+A IP + H D++G A TGSGKTLAFG+
Sbjct: 198 AWNSLNLSNETMVAISKLKFGAPTRIQRAAIPEILSGH----DVVGKAATGSGKTLAFGI 253
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
PI++ LE + K +KGE+A ALI++PTRELA Q++ HL ++
Sbjct: 254 PILESFLES--QGNKKAPKKGEKAPT--------ALILSPTRELAHQISKHLTDLYTSGT 303
Query: 292 VR---VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
V I GG+S +KQ+R L+ ++VVGTPGRLWE++S G L F V+DE
Sbjct: 304 FESPFVATITGGLSIQKQQRQLET-ADVVVGTPGRLWEVISLGHGVLKRFKRTKFLVVDE 362
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--A 406
ADR++ GHF+E++ I+++L + + + E+ +RQTLVFSAT
Sbjct: 363 ADRLLSEGHFKEVEEILNVLGSEDEDEDAEDEEENEEREDVQDSPVQRQTLVFSATFNKG 422
Query: 407 LSADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESF 464
L K K HG L ++ S+E L ++ R VD+ VS +A L+E
Sbjct: 423 LQQKLTGKAKWHGDL-----LSNKESMEYLLKKLNFREERPKFVDVNPVSQMAEGLKEGL 477
Query: 465 IE 466
+E
Sbjct: 478 VE 479
>gi|440469812|gb|ELQ38909.1| ATP-dependent RNA helicase mak5 [Magnaporthe oryzae Y34]
Length = 760
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 165/314 (52%), Gaps = 42/314 (13%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAE 220
+ E + + W L L +M SI +L F +PT IQ A IP A H D++G A
Sbjct: 177 IDETDEGADVSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPEILAGH----DVVGKAS 232
Query: 221 TGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVT 280
TGSGKTLAFG+PI+++ L ++ E E P AL+++PTRELA Q+T
Sbjct: 233 TGSGKTLAFGIPIVEKWLSIN---ASTQSKRVAEGETKTPI----ALVLSPTRELAHQLT 285
Query: 281 DHLKEVAKGINV--RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 338
DH+K + G+ V + GG+S KQ+R L+ + ++VVGTPGRLWE++S K +
Sbjct: 286 DHIKNLCAGLATSPYVCSVTGGLSVHKQQRQLE-KADIVVGTPGRLWEVLSSSTKLIQAF 344
Query: 339 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR--KKR 396
+ F V+DEADR++ GHF++ + I + L ++G + R K R
Sbjct: 345 RGIKFLVVDEADRLLSEGHFKDAKDIFEGLDKVETDDDG-------------IIRGGKAR 391
Query: 397 QTLVFSATIALSADFRKKLKH---GSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTN 452
QTLVFSAT F K L+ G + + + S+E L ++ R + +D+
Sbjct: 392 QTLVFSAT------FNKGLQQKLAGKGRFDLATDS-QSMEYLLKKLKFREEIPKFIDVNP 444
Query: 453 VSVLANKLEESFIE 466
VS +A L+E +E
Sbjct: 445 VSQMAEGLKEGIVE 458
>gi|389641713|ref|XP_003718489.1| ATP-dependent RNA helicase MAK5 [Magnaporthe oryzae 70-15]
gi|374095422|sp|A4REU9.2|MAK5_MAGO7 RecName: Full=ATP-dependent RNA helicase MAK5
gi|351641042|gb|EHA48905.1| ATP-dependent RNA helicase MAK5 [Magnaporthe oryzae 70-15]
gi|440476884|gb|ELQ58053.1| ATP-dependent RNA helicase mak5 [Magnaporthe oryzae P131]
Length = 760
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 165/314 (52%), Gaps = 42/314 (13%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAE 220
+ E + + W L L +M SI +L F +PT IQ A IP A H D++G A
Sbjct: 177 IDETDEGADVSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPEILAGH----DVVGKAS 232
Query: 221 TGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVT 280
TGSGKTLAFG+PI+++ L ++ E E P AL+++PTRELA Q+T
Sbjct: 233 TGSGKTLAFGIPIVEKWLSIN---ASTQSKRVAEGETKTPI----ALVLSPTRELAHQLT 285
Query: 281 DHLKEVAKGINV--RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 338
DH+K + G+ V + GG+S KQ+R L+ + ++VVGTPGRLWE++S K +
Sbjct: 286 DHIKNLCAGLATSPYVCSVTGGLSVHKQQRQLE-KADIVVGTPGRLWEVLSSSTKLIQAF 344
Query: 339 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR--KKR 396
+ F V+DEADR++ GHF++ + I + L ++G + R K R
Sbjct: 345 RGIKFLVVDEADRLLSEGHFKDAKDIFEGLDKVETDDDG-------------IIRGGKAR 391
Query: 397 QTLVFSATIALSADFRKKLKH---GSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTN 452
QTLVFSAT F K L+ G + + + S+E L ++ R + +D+
Sbjct: 392 QTLVFSAT------FNKGLQQKLAGKGRFDLATDS-QSMEYLLKKLKFREEIPKFIDVNP 444
Query: 453 VSVLANKLEESFIE 466
VS +A L+E +E
Sbjct: 445 VSQMAEGLKEGIVE 458
>gi|302890093|ref|XP_003043931.1| hypothetical protein NECHADRAFT_99434 [Nectria haematococca mpVI
77-13-4]
gi|256724850|gb|EEU38218.1| hypothetical protein NECHADRAFT_99434 [Nectria haematococca mpVI
77-13-4]
Length = 760
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 163/295 (55%), Gaps = 25/295 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
AW L L P ++ +I +LGF +PT IQ+ IP G+ D+IG A+TGSGKTLAFG+P+
Sbjct: 195 AWVPLNLSPQILSAIAKLGFTKPTLIQEKTIPEIV-SGE-DVIGKAQTGSGKTLAFGIPM 252
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-- 291
+++ LE L E+G E+ P +++++PTRELA Q+ DHLK + G++
Sbjct: 253 VEKWLE--------LYEQG--VERTGP----MSVVLSPTRELAKQLGDHLKALCDGLSNA 298
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
V + GG+S +KQ+R L+ + ++V+GTPGRLWE++SG + F V+DEADR
Sbjct: 299 PYVCVVTGGLSIQKQQRQLE-KADIVIGTPGRLWEVLSGDATLQNTFSKIRFLVVDEADR 357
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 411
+ + G F+E + II L ++ + +R RQTLVFSAT D
Sbjct: 358 LFKVGQFKEAEDIIGALDGKR-PSDDADSSDEEDDEEEDDERSARQTLVFSAT--FDKDL 414
Query: 412 RKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ KL K K + N + L + R +D+ VS +A+ L+E IE
Sbjct: 415 QTKLAG---KGKSTGNDEEKMAYLMKCLKFRGEPKFIDVNPVSQMADGLKEGLIE 466
>gi|68482156|ref|XP_714962.1| hypothetical protein CaO19.11024 [Candida albicans SC5314]
gi|68482283|ref|XP_714899.1| hypothetical protein CaO19.3540 [Candida albicans SC5314]
gi|74656286|sp|Q59ZH9.1|MAK5_CANAL RecName: Full=ATP-dependent RNA helicase MAK5
gi|46436498|gb|EAK95859.1| hypothetical protein CaO19.3540 [Candida albicans SC5314]
gi|46436563|gb|EAK95923.1| hypothetical protein CaO19.11024 [Candida albicans SC5314]
Length = 782
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 177/318 (55%), Gaps = 39/318 (12%)
Query: 155 PDDAEEELVS--EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
PDD E L + E ++ + A+ + + +L FK+PTPIQK IP A GK
Sbjct: 185 PDDNEINLPNWQEGDLGSSISAYT--------LYGLSQLDFKKPTPIQKETIPIAL-SGK 235
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
D+IG A TGSGKTLA+G+PI+++ ++ + ++++ ++ + P G +I PT
Sbjct: 236 -DVIGKATTGSGKTLAYGIPILEKYIQ----SLNLIKQNNKDKKINHPTG----IIFAPT 286
Query: 273 RELALQVTDHLKEVAKG--INVR-VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 329
RELA QV DHL ++AK ++ R +V I GG+S +KQ+RLL+ P ++V TPGR+ EL+
Sbjct: 287 RELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPGRMLELVQ 346
Query: 330 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS 389
G + L ++ VLDEADR++++GHF E + I+++ G N +S+ +
Sbjct: 347 GDSELAKRLASIDIIVLDEADRLLQDGHFDEFEKILELF----GKNRPKSKSIEW----- 397
Query: 390 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIV 448
K QTLVFSAT + FRK +H K + ++ L+E+ + +V
Sbjct: 398 -----KWQTLVFSATFSRDL-FRKLDRHQKGKSSSLMGNDEIVQLLNEKLKFKDKKPTLV 451
Query: 449 DLTNVSVLANKLEESFIE 466
D +++ ++ E+ +E
Sbjct: 452 DANPKEIVSGQITEALVE 469
>gi|402225555|gb|EJU05616.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 752
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 211/416 (50%), Gaps = 78/416 (18%)
Query: 106 GDGDGDEDGNGVQKEQEKNLK----NQKGKKK--KKKKKGKKIKTVEESVTVSNGPDDAE 159
G G+ E+G + E+ N++ Q G +K K + KGK++ ESV A+
Sbjct: 76 GSGEFTEEGGMLMLEEVDNVEVTYEEQAGGRKVAKFRVKGKQLNKKGESVISGISHKTAQ 135
Query: 160 EELVSEAE-------ISTEFDAW--NELRLHPL---LMKSIYRLGFKEPTPIQKACIPAA 207
+ + FD + E +L PL + +S++ LGF +PT IQ IP A
Sbjct: 136 PSKPRSVQPAAPILGVEQSFDEYLIPEWQLFPLKNQIKRSLHGLGFTKPTEIQSRSIPIA 195
Query: 208 AHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRAL 267
QG+ DIIG AETGSGKTLA+GLPI+ +LL + AG + E+ L AL
Sbjct: 196 L-QGR-DIIGVAETGSGKTLAYGLPIINQLLVK--YAGVIPPEQRT----------LSAL 241
Query: 268 IITPTRELALQVTDHLKEVAKGIN--------------------VRVVPIVGGMSTEKQE 307
I+ PTRELALQV +HL+ V + +N + + IVGGMS KQ
Sbjct: 242 ILAPTRELALQVGEHLRAVVEQVNPSISKEGVKEDKKGPRGPPLISIGGIVGGMSNLKQR 301
Query: 308 RLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
R+++ ++++ TPGRLW+L+ + ++ + F VLDEADRMIE GHF EL +I
Sbjct: 302 RIIERGMDIMIATPGRLWDLLGEDDSLAQQVRAIRFLVLDEADRMIETGHFEELHNI--- 358
Query: 368 LPMTNGSNEGQSEQTQTCVTVSSLQR-------------KKRQTLVFSATIALSADFR-- 412
L +T +EG + + + + QR + QT VFSAT LS D +
Sbjct: 359 LRLTRRDSEGDAIDDASNI---AFQRAGIEVTAGGGSTSENMQTFVFSAT--LSRDLQMN 413
Query: 413 -KKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
KK K G + K+ N ++++ L ER R I+DLT +++ L+E+ +E
Sbjct: 414 LKKRKRGPPR-KKGENPPSTLDELLERLDFRDEQPEIIDLTPEQGVSHTLQEAKLE 468
>gi|213406505|ref|XP_002174024.1| ATP-dependent RNA helicase mak5 [Schizosaccharomyces japonicus
yFS275]
gi|212002071|gb|EEB07731.1| ATP-dependent RNA helicase mak5 [Schizosaccharomyces japonicus
yFS275]
Length = 695
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 134/248 (54%), Gaps = 44/248 (17%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
+ + W+ + L ++ + +LGF PT IQ+ +P A D+IG AETGSGKTLA
Sbjct: 159 AVDVSKWSNIPLSAAILGRLSKLGFSAPTHIQELVLPVA--MAGSDVIGKAETGSGKTLA 216
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 288
FG+PI++ L K ++ALI+ PTRELA Q+ +HL++
Sbjct: 217 FGIPILEHCLRNINKG-------------------IQALIMAPTRELAQQIYNHLEQCNP 257
Query: 289 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
++ +V + GG++ +KQ+RLL +P +V+GTPGRLW ++S + E + VLDE
Sbjct: 258 STDIHIVTVTGGLAIQKQQRLLAKKPSIVIGTPGRLWSVIS-SQGFDEEFKNVKMLVLDE 316
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--A 406
ADR+++ HF EL +IID+L G +QT RQT +FSAT
Sbjct: 317 ADRLLQKNHFEELHNIIDLL--------GNPKQTN------------RQTFIFSATFDAH 356
Query: 407 LSADFRKK 414
L + RKK
Sbjct: 357 LQENLRKK 364
>gi|388579536|gb|EIM19858.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 711
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 164/295 (55%), Gaps = 34/295 (11%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
L++S++ PTPIQK + A+ + D+IG AETGSGKTLA+GLPI+ R++E
Sbjct: 152 LLRSLHENSIVTPTPIQKESLKASMIRK--DVIGIAETGSGKTLAYGLPILSRIVE---- 205
Query: 244 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-----VRVVPIV 298
GE P+ L AL++ PTRELALQV LK+ A + V V +V
Sbjct: 206 --------GE-----IPEESLAALVLCPTRELALQVAGELKKFAPRVQDITRRVNVATVV 252
Query: 299 GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 358
GGMS +KQ+R L+ +VV TPGRLWE++ F V+DEADRMIE GHF
Sbjct: 253 GGMSIQKQKRQLQY-ANIVVATPGRLWEVLLDDGTLAKRAIRSQFLVIDEADRMIEAGHF 311
Query: 359 RELQSIIDMLPMTNGSN----EGQSEQTQTCVTVSSLQRKKRQTLVFSATIA--LSADFR 412
E+ I+ M T+ S+ + + E T+ + QT+VFSAT++ L + +
Sbjct: 312 EEMDKILRMTQRTSKSSTAAFQDEFESTEIGLPEEVPATDDMQTMVFSATLSKDLQQNLK 371
Query: 413 KKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
+K K GS K KQ V +S++ L R R +I+DL+ V+ + + LEE+ ++
Sbjct: 372 RKRKAGSGKKKQEVK--SSLDDLLMRLDFRDLEPSIIDLSPVNKVVSTLEEARVD 424
>gi|341883047|gb|EGT38982.1| hypothetical protein CAEBREN_08481 [Caenorhabditis brenneri]
Length = 736
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 141/243 (58%), Gaps = 37/243 (15%)
Query: 170 TEFDAWNELRLHPL-LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
T+ AW +L P +++++ R+GF +PT IQ A +P A + ++D++GAAETGSGKTLA
Sbjct: 148 TDISAWEKLFFLPTEILQAVERMGFSQPTEIQSAVLPIAV-RDRMDVLGAAETGSGKTLA 206
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 288
FG+P++ RLL++ + + P RALII PTREL +Q+ H+ + +
Sbjct: 207 FGIPLVSRLLDDISSG---------DQKSSGP----RALIIAPTRELVIQIMRHINALIE 253
Query: 289 GINVRVVPIVGGMSTEKQERLL-KARPELVVGTPGRLWELMSGGEK--HLVELHTLSFFV 345
++ IVGG++ KQ+R++ + RP+++V TPGRLW ++ + +L E L V
Sbjct: 254 TTPLKATSIVGGLAQVKQDRVISQQRPDILVATPGRLWAMIQEANEGDYLAEWRNLKCLV 313
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+DE DRM+E G+F EL I++ + + C R+K QTLVFSAT+
Sbjct: 314 VDETDRMVEEGYFAELTHILNKVH-------------EEC------DREKLQTLVFSATL 354
Query: 406 ALS 408
+
Sbjct: 355 TFA 357
>gi|336262101|ref|XP_003345836.1| hypothetical protein SMAC_07120 [Sordaria macrospora k-hell]
gi|380088610|emb|CCC13496.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 807
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 162/313 (51%), Gaps = 42/313 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLP 232
W L L P ++ SI +L F +PT IQ IP A H D+IG A TGSGKTLAFG+P
Sbjct: 210 WVPLDLSPRMISSIAKLKFTKPTLIQAQAIPQIMAGH----DVIGKASTGSGKTLAFGIP 265
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
+++ L E + KGE K ALI++PTRELA Q+ DHL+ + KG+
Sbjct: 266 LVEAWLSAEETRK---QNKGE-------KNGATALILSPTRELAQQIRDHLQALCKGLPT 315
Query: 293 --RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+ ++GGM+ +KQ+R L A ++V+ TPGR+WE+MS L L +SF VLDEAD
Sbjct: 316 APYICSVLGGMAVQKQKRQL-AVADIVIATPGRMWEVMSSDNSVLAALRNISFLVLDEAD 374
Query: 351 RMIENGHFRELQSIIDMLP--MTNGSNEGQ----------------SEQTQTCVTVSSLQ 392
R++++G F+E + I L +NE Q SE+ +
Sbjct: 375 RLLKDGSFKEAEEIFKALDRQAVEENNEDQKMGNTDEEGQEQEEEQSEEEEEEEEEEEEP 434
Query: 393 RKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTN 452
KRQTLVFSAT + + ++KL G + K + +E L ++ R VD
Sbjct: 435 VNKRQTLVFSAT--FNKNLQQKL-AGKSRFKAT--STQDMEYLLQKLNFRETPKFVDANP 489
Query: 453 VSVLANKLEESFI 465
V +A L+E I
Sbjct: 490 VHQMAENLKEGLI 502
>gi|367040293|ref|XP_003650527.1| hypothetical protein THITE_2110069 [Thielavia terrestris NRRL 8126]
gi|346997788|gb|AEO64191.1| hypothetical protein THITE_2110069 [Thielavia terrestris NRRL 8126]
Length = 775
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 162/298 (54%), Gaps = 32/298 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W L L ++ +I RL F +PT IQ + IP + D+IG A TGSGKTLAFG+PI+
Sbjct: 196 WVPLGLSQQMLSAIARLKFAKPTAIQASAIPEVMNGH--DVIGKAVTGSGKTLAFGIPIV 253
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI--NV 292
+ L KA ++ AEK P ALI++PTRELA Q+ DHLK++ G+ +
Sbjct: 254 ESWLA---KATNGIQT----AEKKQPI----ALILSPTRELAHQIADHLKQLCAGLVTSP 302
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
+ + GG++ +KQ+R L+ + ++V+GTPGR+WE+MS L L + F V+DEADR+
Sbjct: 303 YICSVTGGLAVQKQQRQLE-KADIVIGTPGRMWEVMSTSNSVLTALRGVGFLVVDEADRL 361
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 412
+++GHF+E + I+ L T + + R RQTLVFSAT F
Sbjct: 362 LKDGHFKEAEEILKALDRT-----APGDDEEGSDDEDEAPRHSRQTLVFSAT------FN 410
Query: 413 KKLKHGSLKLKQSVNGLN---SIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
K L+ L K N + S+E L ++ R +D VS +A L+E I+
Sbjct: 411 KALQQ-KLAGKARYNLMGEAESLEYLLKKLNFREPRPKFLDTNPVSQMAENLKEGLIQ 467
>gi|238882283|gb|EEQ45921.1| hypothetical protein CAWG_04261 [Candida albicans WO-1]
Length = 768
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 176/318 (55%), Gaps = 39/318 (12%)
Query: 155 PDDAEEELVS--EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
PDD E L + E ++ + A+ + + +L FK+PTPIQK IP A GK
Sbjct: 171 PDDNEINLPNWQEGDLGSSISAYT--------LYGLSQLDFKKPTPIQKETIPIAL-SGK 221
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
D+IG A TGSGKTLA+G+PI+++ ++ + ++++ ++ + P G +I PT
Sbjct: 222 -DVIGKATTGSGKTLAYGIPILEKYIQ----SLNLIKQNNKDKKINHPTG----IIFAPT 272
Query: 273 RELALQVTDHLKEVAKG--INVR-VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 329
RELA QV DHL ++AK ++ R +V I GG+S +KQ+RLL+ P ++V TPGR+ EL+
Sbjct: 273 RELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPGRMLELVQ 332
Query: 330 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS 389
G + L + VLDEADR++++GHF E + I+++ G N +S+ +
Sbjct: 333 GDSELAKRLASTDIIVLDEADRLLQDGHFDEFEKILELF----GKNRPKSKSIEW----- 383
Query: 390 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIV 448
K QTLVFSAT + FRK +H K + ++ L+E+ + +V
Sbjct: 384 -----KWQTLVFSATFSRDL-FRKLDRHQKGKSSSLMGNDEIVQLLNEKLKFKDKKPTLV 437
Query: 449 DLTNVSVLANKLEESFIE 466
D +++ ++ E+ +E
Sbjct: 438 DANPKEIVSGQITEALVE 455
>gi|167533855|ref|XP_001748606.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772847|gb|EDQ86493.1| predicted protein [Monosiga brevicollis MX1]
Length = 698
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 153/261 (58%), Gaps = 20/261 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W+E L+P ++K+I +LGF+ PTPIQ+A IP + DIIG AETGSGKTL
Sbjct: 268 IPPPLRSWDEAGLNPEMLKAIQKLGFENPTPIQRAAIPIGLNNR--DIIGVAETGSGKTL 325
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF LP++ ++ +++ E+ + YA +I+ PTR+LA Q+ D + A
Sbjct: 326 AFVLPLLNWIIS----LPQLVREQDIDNGPYA-------VILAPTRDLAQQIEDEANKFA 374
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + VR+V ++GG S E Q L E+V+ TPGRL +++ + H + L+ S+ V+D
Sbjct: 375 RPLGVRLVSVIGGHSREDQSFKLNQGCEVVIATPGRLIDVL---DNHYMVLNQCSYIVMD 431
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIA 406
EADRM++ G E+Q I++ +P++N + + Q + +S + K RQT++F+AT+
Sbjct: 432 EADRMLDMGFEPEVQRILEYIPVSNMKPDTDEAEDQHLLAENSRNKAKYRQTVLFTATMP 491
Query: 407 LSADFRKKLKHGSLKLKQSVN 427
S + +L L+ +VN
Sbjct: 492 TSVE---RLARTYLRRPATVN 509
>gi|358057375|dbj|GAA96724.1| hypothetical protein E5Q_03394 [Mixia osmundae IAM 14324]
Length = 751
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 218/473 (46%), Gaps = 102/473 (21%)
Query: 52 FLVGS-NELDGGFLSLEEIDEASYNLQIPKP---------EKGKPGKKTNTKKRKRSSAN 101
F+ G+ +E+ GG L EE+D+ ++ + + +P K+T T K SS
Sbjct: 27 FVSGAEDEVAGGLLDFEEVDDVQVITELDESGNKHFRFLVAEAEPEKETATPTAKPSSI- 85
Query: 102 EEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAE-- 159
KK+ K K ++I+ +++ + S PDDAE
Sbjct: 86 -----------------------------KKRTKDTKAEQIRHEDDTASTSAQPDDAEPA 116
Query: 160 ------EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKV 213
++L+ E + + + LHP L ++ LGF +PTPIQ+A V
Sbjct: 117 SGTADADQLLREFDFA-HLPGYVPQSLHPALAHAMLELGFSKPTPIQRATFDIMLGADAV 175
Query: 214 --DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 271
DI+G A+TGSGKTLA+GLPI+ ++ + K P+ L ALI+ P
Sbjct: 176 LKDIMGIAQTGSGKTLAYGLPILD----------QIFRQNARWPSKEQPR-KLTALILLP 224
Query: 272 TRELALQVTDHLKEV-----AKGINVR-----------VVPIVGGMSTEKQERLLKARP- 314
TRELA+QV HL V + GI+ + +V +VGG+S KQ R L
Sbjct: 225 TRELAMQVKTHLATVITNASSAGIDTKGKGKGPYPFANIVAVVGGISVLKQRRQLAVDRG 284
Query: 315 -ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN- 372
+++V TPGRLWE++ + ++ L + VLDEADRM++ GHF EL I+D+ N
Sbjct: 285 IDIIVATPGRLWEMIDDDDDLARKIAALDYLVLDEADRMVQAGHFVELDKILDLTRRGNS 344
Query: 373 --------------GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG 418
+ +Q +V + +T++FSAT LS D + L
Sbjct: 345 SSISHDSSAPDVDIADQDKPDDQAFAEQSVRPNGNPRMRTMIFSAT--LSKDLQVNLSIP 402
Query: 419 SLK----LKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
L+ ++++ +I+ L + R + A+++L+++ + L+E F++
Sbjct: 403 HLRNLRAIRKAGGSQGAIDDLLLKIDFRDPDPALINLSSMQGTVDTLQECFVD 455
>gi|358057374|dbj|GAA96723.1| hypothetical protein E5Q_03395 [Mixia osmundae IAM 14324]
Length = 750
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 216/472 (45%), Gaps = 100/472 (21%)
Query: 52 FLVGS-NELDGGFLSLEEIDEASYNLQIPKP---------EKGKPGKKTNTKKRKRSSAN 101
F+ G+ +E+ GG L EE+D+ ++ + + +P K+T T K SS
Sbjct: 27 FVSGAEDEVAGGLLDFEEVDDVQVITELDESGNKHFRFLVAEAEPEKETATPTAKPSSI- 85
Query: 102 EEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEE 161
KK+ K K ++I+ +++ + S PDDAE
Sbjct: 86 -----------------------------KKRTKDTKAEQIRHEDDTASTSAQPDDAEPA 116
Query: 162 --LVSEAEISTEFD-----AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKV- 213
++ EFD + LHP L ++ LGF +PTPIQ+A V
Sbjct: 117 SGTADADQLLREFDFAHLPGYVPQSLHPALAHAMLELGFSKPTPIQRATFDIMLGADAVL 176
Query: 214 -DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
DI+G A+TGSGKTLA+GLPI+ ++ + K P+ L ALI+ PT
Sbjct: 177 KDIMGIAQTGSGKTLAYGLPILD----------QIFRQNARWPSKEQPR-KLTALILLPT 225
Query: 273 RELALQVTDHLKEV-----AKGINVR-----------VVPIVGGMSTEKQERLLKARP-- 314
RELA+QV HL V + GI+ + +V +VGG+S KQ R L
Sbjct: 226 RELAMQVKTHLATVITNASSAGIDTKGKGKGPYPFANIVAVVGGISVLKQRRQLAVDRGI 285
Query: 315 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN-- 372
+++V TPGRLWE++ + ++ L + VLDEADRM++ GHF EL I+D+ N
Sbjct: 286 DIIVATPGRLWEMIDDDDDLARKIAALDYLVLDEADRMVQAGHFVELDKILDLTRRGNSS 345
Query: 373 -------------GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
+ +Q +V + +T++FSAT LS D + L
Sbjct: 346 SISHDSSAPDVDIADQDKPDDQAFAEQSVRPNGNPRMRTMIFSAT--LSKDLQVNLSIPH 403
Query: 420 LK----LKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
L+ ++++ +I+ L + R + A+++L+++ + L+E F++
Sbjct: 404 LRNLRAIRKAGGSQGAIDDLLLKIDFRDPDPALINLSSMQGTVDTLQECFVD 455
>gi|149248082|ref|XP_001528428.1| hypothetical protein LELG_00948 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032565|sp|A5DUB2.1|MAK5_LODEL RecName: Full=ATP-dependent RNA helicase MAK5
gi|146448382|gb|EDK42770.1| hypothetical protein LELG_00948 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 855
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 211/454 (46%), Gaps = 83/454 (18%)
Query: 14 KETKPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEAS 73
K P +++ +K + K+N L W DN F GGF LEEID
Sbjct: 33 KRNTPTLKQKLKKESKIVKINELAW-KPVEIPDN--FGDF-------GGFYGLEEIDGVD 82
Query: 74 YNLQIPKPE---KGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQK- 129
+ KP+ KG+ G+K+ + + ++ NE + GD ++G + +++++N N +
Sbjct: 83 VEMVDGKPQFVVKGEEGEKSVSNEN--TTTNELEDGDDIEVDEGEEIAQQEQENSDNDEL 140
Query: 130 -------------------------------GKKKKKKKKGKKIKTVEESVT--VSNGPD 156
K++K KK E + N
Sbjct: 141 IEEDAEEVEEQQQHGEKELEEEEFTGFGDDIAKEEKDSDGAKKKLNSSEDIDELKYNAFA 200
Query: 157 DAEEELVSEAEISTEFDAWNELR----LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+ + L ++ EI + W E + L P ++ + + F PTPIQK IP A +GK
Sbjct: 201 NLDLPLPNDDEI--DLPEWGEDKIETCLSPYILNGLSNMKFTTPTPIQKRTIPLAL-EGK 257
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
D+IG A TGSGKTLA+G+PI+++ ++ + + + EK H +I PT
Sbjct: 258 -DVIGKATTGSGKTLAYGIPILEKYIQSLDTVKRKVREK--------VVNHPTGIIFAPT 308
Query: 273 RELALQVTDHLKEVAKGINVR---VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 329
RELA QV DHL ++A+ + +V + GG+S +KQERLL P ++V TPGR+ EL
Sbjct: 309 RELAHQVVDHLNKIAQYSPLSTKGIVSVTGGLSIQKQERLLSFGPGIIVATPGRMLELCQ 368
Query: 330 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS 389
++ + L VLDEADR++++GHF E + I+++ N+ E
Sbjct: 369 NDQELVKRLSMTDIIVLDEADRLLQDGHFEEFEKILELFNKNRPKNDKSIEW-------- 420
Query: 390 SLQRKKRQTLVFSATIA--LSADFRKKLKHGSLK 421
K QTLVFSAT + L K+ K S+K
Sbjct: 421 -----KWQTLVFSATFSRDLFGKLDKQQKQKSVK 449
>gi|260949921|ref|XP_002619257.1| hypothetical protein CLUG_00416 [Clavispora lusitaniae ATCC 42720]
gi|238846829|gb|EEQ36293.1| hypothetical protein CLUG_00416 [Clavispora lusitaniae ATCC 42720]
Length = 801
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 138/241 (57%), Gaps = 29/241 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W + L + + LGFK+PTPIQK+ IP A +GK D+IG A TGSGKTLA+G+PI+
Sbjct: 215 WQNVPLSAYTLSGLQALGFKQPTPIQKSAIPLAL-EGK-DVIGKATTGSGKTLAYGIPIL 272
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR- 293
++ + + + + ++K A P G +I PTRELA QV+DHL ++AK +
Sbjct: 273 EKYISKIAEIKTLRQKKTIPA----PTG----IIFAPTRELAHQVSDHLNKIAKYAPLAS 324
Query: 294 --VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+V + GG+S ++QERLL P ++V TPGR EL+ E+ + VLDEADR
Sbjct: 325 NGIVSVTGGLSIQRQERLLSYGPGIIVATPGRFLELIEKSEEFTKRMALTEIIVLDEADR 384
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 411
++++GHF E + I+D+L G N ++ + QTLVFSAT + F
Sbjct: 385 LLQDGHFEEFERILDLL----GKNRDKAYGW------------RWQTLVFSATFSRDLFF 428
Query: 412 R 412
+
Sbjct: 429 K 429
>gi|380478434|emb|CCF43606.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 779
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 164/311 (52%), Gaps = 33/311 (10%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAE 220
V EAE + W +L L P + +I +L F +PT IQ + IP A H D+IG A
Sbjct: 204 VEEAEEDLDMTPWVDLGLSPATVSAIAKLKFAKPTKIQASTIPEILAGH----DVIGKAS 259
Query: 221 TGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVT 280
TGSGKTLAF +PI++ L++ EEK + + ALI++PTRELA Q+T
Sbjct: 260 TGSGKTLAFSIPIVEDWLDK-------YEEKADGGKPEKADNTPLALILSPTRELAHQIT 312
Query: 281 DHLKEVAKG-INVR-VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 338
+H+K + G +N V + GG+S KQ+R L A+ ++V+GTPGRLWE++SG + L
Sbjct: 313 NHIKNLCAGLVNAPFVCSVTGGLSVFKQQRQL-AKADIVIGTPGRLWEVISGSRELLAGF 371
Query: 339 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQT 398
+ + V+DEADR++ GHF+E I+D L + + ++ RQT
Sbjct: 372 RQIRYLVVDEADRLLSEGHFKEAGEILDALDREVIEEDDDDDDEKSL--------SARQT 423
Query: 399 LVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSV 455
LVFSAT L K K G + ++ S+E L ++ R +D+
Sbjct: 424 LVFSATFHQGLQQKLAGKGKWGLMSEEE------SMEYLLKKLNFREEKPKFIDVNPAKQ 477
Query: 456 LANKLEESFIE 466
+A+ L+E IE
Sbjct: 478 MASGLKEGLIE 488
>gi|354546640|emb|CCE43372.1| hypothetical protein CPAR2_210170 [Candida parapsilosis]
Length = 800
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 167/300 (55%), Gaps = 38/300 (12%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
L P + + L F +PTPIQK IP A +GK D++G A TGSGKTLA+G+PI+++ L+
Sbjct: 186 LSPYTLNGLANLNFTKPTPIQKRTIPIAI-EGK-DVVGKATTGSGKTLAYGIPILEKYLQ 243
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK--GINVR-VVP 296
+ ++++ ++ + P G +I TPTRELA QV DHL ++A+ ++VR +V
Sbjct: 244 SLD----LVKQNVKDQKINRPNG----IIFTPTRELAHQVVDHLNKLAQYSPLSVRGIVS 295
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+ GG++ +KQ+RLLK P ++V TPGR EL + + + VLDEADR++++G
Sbjct: 296 VTGGLAIQKQQRLLKMGPGIIVATPGRFLELCENDSELMKRMSLTDIIVLDEADRLLQDG 355
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA--LSADFRKK 414
HF E + I+++L T N+ K QTLVFSAT + L K+
Sbjct: 356 HFEEFEKILELLGKTRPKNKNVDW--------------KWQTLVFSATFSRDLFGKLDKQ 401
Query: 415 LKHGSLKLKQSVNGLNS-------IETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
K + KQ ++G NS IE L+E+ + ++D +++ ++ E+ +E
Sbjct: 402 QKPKAKNQKQQIDG-NSLVQNDEIIELLNEKLHFKDKKPVLIDANPKEIVSGQITEALVE 460
>gi|146412600|ref|XP_001482271.1| hypothetical protein PGUG_05291 [Meyerozyma guilliermondii ATCC
6260]
gi|152032567|sp|A5DPU0.1|MAK5_PICGU RecName: Full=ATP-dependent RNA helicase MAK5
gi|146393035|gb|EDK41193.1| hypothetical protein PGUG_05291 [Meyerozyma guilliermondii ATCC
6260]
Length = 754
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 161/305 (52%), Gaps = 38/305 (12%)
Query: 170 TEFDAWN--ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
T+ W+ + L + + GFKEPT IQ+ IP A QGK D+IG A TGSGKTL
Sbjct: 179 TDLPKWSMENVSLSTYTINGLAGCGFKEPTAIQRKAIPLAL-QGK-DVIGKATTGSGKTL 236
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
A+G+PI++R L + E ++ A+I PTRELA QV DH+ ++A
Sbjct: 237 AYGIPILERCLAQLESKTNTIKPPT-------------AMIFAPTRELAHQVVDHMNKIA 283
Query: 288 KGINVR---VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
K + +V I GG+S +KQERLL P ++V TPGR ELM + +
Sbjct: 284 KFSPLAQNGIVSITGGLSIQKQERLLSHGPSILVATPGRCLELMEKSVDLVNRMALTDMI 343
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
VLDEADR++++GHF E + I+DML N+ + ++TQ ++ QTLVFSAT
Sbjct: 344 VLDEADRLLQDGHFEEFEKILDML------NKHRPKKTQGV-------SRRWQTLVFSAT 390
Query: 405 IALSADFRKKLKHGSLKLKQS--VNGLNSIETLSERAGMRANV-AIVDLTNVSVLANKLE 461
S D KL + + K+S + + L+ + R A++D +++ K+
Sbjct: 391 --FSRDLFGKLSNNKPRNKESSFIENDEILSLLNTKLQFRDRTPAVIDANPKEIVSGKVT 448
Query: 462 ESFIE 466
E+ +E
Sbjct: 449 EALVE 453
>gi|443896134|dbj|GAC73478.1| RNA helicase [Pseudozyma antarctica T-34]
Length = 886
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 167/348 (47%), Gaps = 58/348 (16%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA------------------AHQG 211
+ AW+ L LH L +++ GF PT IQ IP A +
Sbjct: 224 SSLPAWSHLPLHAALKRALAHKGFHSPTEIQNRSIPLALGLQQDDSSDSDEPSTSSSAFK 283
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 271
K D++G ++TGSGKTLA+GLPI+ L E + P G ALI+ P
Sbjct: 284 KRDVVGVSQTGSGKTLAYGLPILNYLFHNAENVA----SAPTHGDVPPPLG---ALILCP 336
Query: 272 TRELALQVTDHLKEVAKGINV--------------RVVPIVGGMSTEKQERLLKARP--- 314
TRELALQV+ HL +V + + ++ + GGMS KQ RLL+ R
Sbjct: 337 TRELALQVSAHLTDVIRSSCLVDDTLSYAKLVRRPQIAVVCGGMSEHKQRRLLQGRSRRA 396
Query: 315 --ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 372
+++V TPGRLWE+ ++ + + F VLDEADRM++ GHF E++ I++++
Sbjct: 397 GVDIIVATPGRLWEMTRLDDELAARIKQVRFLVLDEADRMVQVGHFAEMEHILNLVHRAE 456
Query: 373 GSN--EGQSEQTQT------CVTVSSLQR--KKRQTLVFSATI--ALSADF--RKKLKHG 418
EGQ Q V V R QT VFSAT+ AL + R+KL
Sbjct: 457 AQRPKEGQDGQQSDSDGESGAVVVGEGVRPNAAMQTFVFSATLSKALQTNLKRRRKLPQF 516
Query: 419 SLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ K + +++E L ER R++ AIVDLT L + L E+ +E
Sbjct: 517 TKKRHSKRSAGSTLEELLERIDFRSSPAIVDLTPAQGLPSGLMETKLE 564
>gi|241951434|ref|XP_002418439.1| ATP-dependent RNA helicase, putative; maintenance of killer
protein, putative [Candida dubliniensis CD36]
gi|223641778|emb|CAX43740.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 758
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 175/318 (55%), Gaps = 39/318 (12%)
Query: 155 PDDAEEELVS--EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
PDD E L + E ++ + A+ + + +L FK+PTPIQK IP A GK
Sbjct: 161 PDDNEINLPNWQEGDLGSSISAYT--------LYGLSQLNFKKPTPIQKETIPIAL-SGK 211
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
D+IG A TGSGKTLA+G+PI+++ ++ + ++++ ++ + P G +I PT
Sbjct: 212 -DVIGKATTGSGKTLAYGIPILEKYIQ----SLNLIKQNNKDNKINHPTG----IIFAPT 262
Query: 273 RELALQVTDHLKEVAKG--INVR-VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 329
RELA QV DHL +AK ++ R +V I GG+S +KQ+RLL+ P ++V TPGR+ EL+
Sbjct: 263 RELAHQVVDHLNSLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPGRMLELIQ 322
Query: 330 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS 389
G + L + VLDEADR++++GHF E + I+++ G N +++ +
Sbjct: 323 GDSELAKRLASTDIIVLDEADRLLQDGHFDEFEKILELF----GKNRPENKSIEW----- 373
Query: 390 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIV 448
K QTLVFSAT + FRK +H K + ++ L+E+ + ++
Sbjct: 374 -----KWQTLVFSATFSRDL-FRKLDRHQKGKSSSLMGNDEIVQLLNEKLKFKDKKPTLI 427
Query: 449 DLTNVSVLANKLEESFIE 466
D +++ ++ E+ +E
Sbjct: 428 DANPKEIVSGQITEALVE 445
>gi|291001145|ref|XP_002683139.1| predicted protein [Naegleria gruberi]
gi|284096768|gb|EFC50395.1| predicted protein [Naegleria gruberi]
Length = 460
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 127/203 (62%), Gaps = 13/203 (6%)
Query: 188 IYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL--LEEREKAG 245
+YRLGF +PTPIQ+ IP A Q + DI+ AAETGSGKTLAF LPI+ L L+E E A
Sbjct: 1 LYRLGFYKPTPIQEESIPKAIGQ-QADILAAAETGSGKTLAFVLPIIDELMKLKENEPAQ 59
Query: 246 KMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEK 305
++ ++ E LR+LI+ PTRELALQV H++ V + +++VV +VGG++ EK
Sbjct: 60 QV-----KDDESRTDMFQLRSLILLPTRELALQVCSHIEAVIRNTSLKVVGLVGGLNEEK 114
Query: 306 QERLLKA-RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 364
Q R + +P+++V TPGR W + G + L F V+DEADRM+ + HF ELQSI
Sbjct: 115 QIREIHVQKPDIIVATPGRYWFYIDKGMFASNSILGLRFLVIDEADRMVADAHFFELQSI 174
Query: 365 IDMLPM----TNGSNEGQSEQTQ 383
+ + + N N+ + EQ +
Sbjct: 175 LRYITIERFKRNYINQKEEEQVE 197
>gi|32564046|ref|NP_871838.1| Protein F55F8.2, isoform b [Caenorhabditis elegans]
gi|351063670|emb|CCD71884.1| Protein F55F8.2, isoform b [Caenorhabditis elegans]
Length = 579
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 148/268 (55%), Gaps = 35/268 (13%)
Query: 188 IYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKM 247
I+ F EPT IQ A +PAA + + D++GAAETGSGKTLAFG+P++ RLLE + +
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAV-RDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDS--- 58
Query: 248 LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQE 307
++ E E P RALI+ PTREL +Q+ H+ + + IVGG++ KQE
Sbjct: 59 --QETESTEVRGP----RALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQE 112
Query: 308 RLL-KARPELVVGTPGRLWELMSGGE--KHLVELHTLSFFVLDEADRMIENGHFRELQSI 364
R++ + RP++VV TPGRLW +M E + L E L V+DE DRM+E G+F EL I
Sbjct: 113 RIISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHI 172
Query: 365 IDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQ 424
+ N+ E +++K QTLVFSAT+ + + + K +
Sbjct: 173 L---------NKIHEES----------EKEKLQTLVFSATLTFAK--AQDVAEEEKKKAK 211
Query: 425 SVNGLNSIETLSERAGMRANV-AIVDLT 451
++ I+ L + G+R N ++DLT
Sbjct: 212 ELSSQQKIQRLIKLTGLRENKHKVIDLT 239
>gi|402081834|gb|EJT76979.1| ATP-dependent RNA helicase MAK5 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 760
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 160/302 (52%), Gaps = 44/302 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLP 232
W L L ++ SI RL F +PT IQ IP A H D+IG A TGSGKTLAFG+P
Sbjct: 196 WVPLDLSGEMLSSIARLKFSKPTAIQAQAIPEILAGH----DVIGKASTGSGKTLAFGIP 251
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
I++R + + A E+G++ AL+++PTRELA Q+T+H K + G+
Sbjct: 252 IVERWISLSQTAASKSPEEGKKP---------IALVLSPTRELAHQITNHFKALCGGLAT 302
Query: 293 --RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+ + GG+S KQ+R L+ + ++V+ TPGRLWE++S ++ + + + V+DEAD
Sbjct: 303 APYICSVTGGLSVHKQQRQLE-KADIVIATPGRLWEVLSSSKQTVAAFRHIKYLVVDEAD 361
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
R++ +GHF++ + I+ L ++ +T + RQTLVFSAT
Sbjct: 362 RLLSDGHFKDAEEIMRAL-----------DRIETTEDRDNQGPPPRQTLVFSAT------ 404
Query: 411 FRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESF 464
F K L+ G L N S+E L +R R +D+ VS +A +L+E
Sbjct: 405 FNKGLQQKLAGKGRFDLN---NDALSMEYLLKRLKFREEKPKFIDVNPVSQMAARLKEGL 461
Query: 465 IE 466
+E
Sbjct: 462 VE 463
>gi|346327471|gb|EGX97067.1| ATP dependent RNA helicase, putative [Cordyceps militaris CM01]
Length = 852
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 175/356 (49%), Gaps = 30/356 (8%)
Query: 121 QEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRL 180
++ L+ KK+K G ++ + + + DD E + W L L
Sbjct: 190 HDRKLEAAAADTIKKQKGGAQVNPFD---VLMDAQDDENE---------ANLEDWVALNL 237
Query: 181 HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEE 240
P ++ +I +LGF PT IQ IP D+IG A+TGSGKTLAFG+PI++R LE
Sbjct: 238 SPAIVSAIGKLGFTSPTAIQAESIPPI--NAGADVIGKAQTGSGKTLAFGIPIVERWLEL 295
Query: 241 REKAGKMLEEKGEEAEKYAPKGHLR----ALIITPTRELALQVTDHLKEVAKGI---NVR 293
+E G+E E R A+I++PTRELA Q+ DHL+ + G+ + R
Sbjct: 296 HADKDGTDDEDGDEEEAEQDGASSRKGPTAVILSPTRELAKQIGDHLRALCAGLPAASPR 355
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT-LSFFVLDEADRM 352
V + GG+S KQ+R L+ ++VVGTPGRLWE++ G + L F V+DEADR+
Sbjct: 356 VCVVTGGLSVHKQQRQLRT-ADVVVGTPGRLWEVLDGDAALQAAFRSRLRFLVVDEADRL 414
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 412
+ G F+E + II L G +E E+ + V RQTLVFSAT D +
Sbjct: 415 FKVGQFKEAELIIGALDRRAGGSESDDEEDEEEVDEGDEGSWSRQTLVFSAT--FDKDLQ 472
Query: 413 KKLKHGSLKLKQSVNGLN--SIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
KL K + S G + + L R +D+ VS +A L E IE
Sbjct: 473 MKLAG---KKRPSAQGTDEEKMADLMRCLKFRGQPTFIDVNPVSQMAEGLREGLIE 525
>gi|242045284|ref|XP_002460513.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
gi|241923890|gb|EER97034.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
Length = 760
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 162/309 (52%), Gaps = 60/309 (19%)
Query: 99 SANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDA 158
S +EE GD +GDEDG+ + E + +++ ++ ++GP D
Sbjct: 122 SGDEEASGDREGDEDGSDEEGGSELGEEEDAHEEEDMAEQND-----------TSGPVDP 170
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGA 218
+ S S +++ EL L L+++ LG+++PTPIQ ACIP A G+ DI G+
Sbjct: 171 SKFFASSEGASFHANSFLELNLSRPLVRACEALGYQKPTPIQAACIPLAL-TGR-DICGS 228
Query: 219 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELA 276
A TGSGKT AF LP+++RLL + PK +R LI+TPTRELA
Sbjct: 229 AITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILTPTRELA 269
Query: 277 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 336
QV ++++A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + + V
Sbjct: 270 AQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLS--V 327
Query: 337 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 396
L L+ +LDEADR++E G E+Q +I M P K+R
Sbjct: 328 GLEDLAVVILDEADRLLELGFSAEIQELIRMCP------------------------KRR 363
Query: 397 QTLVFSATI 405
QT++FSAT+
Sbjct: 364 QTMLFSATM 372
>gi|307104921|gb|EFN53172.1| hypothetical protein CHLNCDRAFT_25981 [Chlorella variabilis]
Length = 459
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 122/202 (60%), Gaps = 23/202 (11%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
LRALI+ PTRELALQV +HL+ V KG + VVPIVGG+S KQERLL PE+VV TPGR
Sbjct: 4 LRALILAPTRELALQVCEHLQAVGKGCGIWVVPIVGGISALKQERLLAKHPEVVVATPGR 63
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
L +LM G HL L LSF V+DEADRM++ GH+ EL SI+ +P
Sbjct: 64 LLDLMRAGHAHLTHLSRLSFLVIDEADRMVQQGHYGELSSILGAIPRRQ----------- 112
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
Q+ + QT VFSAT+ L A R++L+ G S + +++L ++ R
Sbjct: 113 --------QQARLQTFVFSATLTLPASLRRRLRKGGGGASGSSD----LDSLMDKIPFRG 160
Query: 444 NVAIVDLTNVSVLANKLEESFI 465
IVDLT+ LA+K+EE+++
Sbjct: 161 KPKIVDLTSQRRLADKVEEAYL 182
>gi|71003417|ref|XP_756389.1| hypothetical protein UM00242.1 [Ustilago maydis 521]
gi|46095767|gb|EAK81000.1| hypothetical protein UM00242.1 [Ustilago maydis 521]
Length = 957
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 183/386 (47%), Gaps = 80/386 (20%)
Query: 157 DAEEELVSEAEISTEF-DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP---------- 205
D +++ EAE + AW+ L LH L +++ GFK+PT IQ+ IP
Sbjct: 224 DLQDDEADEAEFDDKLLPAWSHLALHSDLKRALLHKGFKQPTEIQRKAIPFALGLQQEAT 283
Query: 206 ---------------AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 250
A + + K D++G ++TGSGKTLA+GLPI+ L E E A
Sbjct: 284 SSDDSEDTADSAAIGAPSTRRKRDVVGVSQTGSGKTLAYGLPILNYLFENAENAIASSCR 343
Query: 251 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG------INV------------ 292
+ + P G ALI+ PTRELALQV+ HL ++ + I+V
Sbjct: 344 RNAVDDLPPPLG---ALILCPTRELALQVSSHLIDLVRASCIVSDIDVDQPEISHRKLLR 400
Query: 293 --RVVPIVGGMSTEKQERLLKARP---------ELVVGTPGRLWELMSGGEKHLVELHTL 341
++ + GGMS +KQ RLL+ R +++V TPGRLWE+ + +
Sbjct: 401 RPQIAVVCGGMSEQKQRRLLEGRSRQGDRKAGVDIIVATPGRLWEMTRLDDHLAARIKQT 460
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR----- 396
F VLDEADRM+E GHF E++ I++++ + + + Q V+ S + +
Sbjct: 461 RFLVLDEADRMVEVGHFAEMEHILNLVNRSEAKRPSEGQDGQQHVSGSDKEDESEVEIPT 520
Query: 397 ---------QTLVFSATI--ALSADF--RKKLKHGSLKL--KQSVNGLNSIETLSERAGM 441
QT +FSAT+ AL + R+KLK + K K+ N +++ L +R
Sbjct: 521 HGVKPSSSMQTFIFSATLSKALQVNLKRRRKLKQFAKKRHSKRKENA-TTLDELMDRIDF 579
Query: 442 RANV-AIVDLTNVSVLANKLEESFIE 466
R A++DLT L L E+ IE
Sbjct: 580 RDQAPAVIDLTPAQGLPQGLMETKIE 605
>gi|323507773|emb|CBQ67644.1| related to MAK5-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 946
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 173/368 (47%), Gaps = 75/368 (20%)
Query: 171 EFD-----AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA------------------ 207
EFD AW+ L LH L +++ GFK+PT IQ IP A
Sbjct: 235 EFDHKLLPAWSHLPLHAALKRALAHKGFKKPTEIQNRSIPLALGLQQEAASSDDSDDAAA 294
Query: 208 -----AHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG 262
+ + K D++G ++TGSGKTLA+GLPI+ L E E A + P G
Sbjct: 295 ANSSSSSRRKRDVVGVSQTGSGKTLAYGLPILNYLFENAENAIASFSRPSTTDDVPPPLG 354
Query: 263 HLRALIITPTRELALQVTDHLKEVAKGINV--------------------RVVPIVGGMS 302
ALI+ PTRELALQV+ HL E+ + + ++ + GGMS
Sbjct: 355 ---ALILCPTRELALQVSSHLTEIVRASCLVSSTTGDEDEISHKKLLRRPQIAVVCGGMS 411
Query: 303 TEKQERLLKARP---------ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+KQ RLL R +++V TPGRLWE+ + + F VLDEADRM+
Sbjct: 412 EQKQRRLLDGRSRQGDRKAGVDIIVATPGRLWEMTRLDDNLAARIKQTRFLVLDEADRMV 471
Query: 354 ENGHFRELQSIIDMLPMTNG--SNEG------QSEQTQTCVTVSSLQ-RKKRQTLVFSAT 404
E GHF E++ I++++ + G +EG Q + ++ V ++ QT VFSAT
Sbjct: 472 EVGHFAEMEHILNLVNRSEGRRPSEGKDGQLPQDDDDESEVETHGVKPSANMQTFVFSAT 531
Query: 405 I--ALSADFRKKLKHGSLKLKQSVN---GLNSIETLSERAGMRANV-AIVDLTNVSVLAN 458
+ AL + +++ K K+ +++ L +R R + A++DLT L
Sbjct: 532 LSKALQINLKRRRKQKQFTKKRHSKRKENATTLDELMDRVDFRDDSPAVIDLTPGQGLPE 591
Query: 459 KLEESFIE 466
L E+ IE
Sbjct: 592 GLMETKIE 599
>gi|344303044|gb|EGW33318.1| hypothetical protein SPAPADRAFT_50211 [Spathaspora passalidarum
NRRL Y-27907]
Length = 781
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 183/341 (53%), Gaps = 45/341 (13%)
Query: 145 VEESVTVSNGPDDAEEELVSEA-----------EIST-EFDAWNELRLHPLLMKSIYRLG 192
VEE+ + PD+ E+EL + A EI E+ + + L P + + L
Sbjct: 147 VEETEEIDEKPDELEKELSANAFANLDLPLPDDEIDLPEWQSEDLSSLSPYTLNGLSVLN 206
Query: 193 FKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKG 252
F +PTPIQK IP A +GK D+IG A TGSGKTLA+G+PI+++ L + +++K
Sbjct: 207 FSKPTPIQKKAIPLAL-EGK-DVIGKATTGSGKTLAYGIPILEKYLSSLSTIKQNVKDKI 264
Query: 253 EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG--INVR-VVPIVGGMSTEKQERL 309
P G ++ PTRELA QV HL E+AK ++ R +V I GG+S +KQERL
Sbjct: 265 VNN----PTG----IVFAPTRELAHQVVSHLNELAKYSPLSTRGIVSITGGLSIQKQERL 316
Query: 310 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
L P ++V TPGR EL+ E+ + + VLDEADR++++GHF E + I+++
Sbjct: 317 LAHGPGIIVATPGRFLELLQNDEQLTKRMASTDILVLDEADRLLQDGHFEEFEKILELFG 376
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL-KHGSLKLK-QSVN 427
+ N+ S+Q K QTLVFSAT S D KL KH K K S+
Sbjct: 377 KSRPKNK-------------SMQW-KWQTLVFSAT--FSRDLFGKLDKHQKNKAKGNSLM 420
Query: 428 GLNSIET-LSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 466
+ I T L+E+ + + A++D +++ ++ E+ +E
Sbjct: 421 DNDEIVTLLNEKLKFKDSKPALIDANPKEIVSGQITEALVE 461
>gi|224014332|ref|XP_002296829.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968684|gb|EED87030.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 884
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 123/188 (65%), Gaps = 7/188 (3%)
Query: 189 YRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL--LEEREKAGK 246
+ L + PTPIQ + +PAA G+ D++GAA TGSGKTL++GLPI+Q + L++ E A
Sbjct: 207 HSLNYSYPTPIQASTLPAAIL-GRRDVVGAAPTGSGKTLSYGLPILQWVLGLDDAEIAA- 264
Query: 247 MLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ 306
+ EE +A + K L+ALI+ PTRELA+QVT L + V + IVGG + KQ
Sbjct: 265 LDEEDSADAGEPKQKRPLQALILVPTRELAIQVTSELA-IVSCHKVPIGTIVGGFAEVKQ 323
Query: 307 ERLL-KARPELVVGTPGRLWELMSGGE-KHLVELHTLSFFVLDEADRMIENGHFRELQSI 364
+R+L + RP ++V TPGRLWELMS E HL ++ L F V+DEADRMI+ G F +L+ I
Sbjct: 324 KRVLERKRPGVLVATPGRLWELMSSNEYSHLNDMSQLRFLVIDEADRMIKQGSFPQLKQI 383
Query: 365 IDMLPMTN 372
+++ N
Sbjct: 384 FEVINQAN 391
>gi|448512603|ref|XP_003866769.1| Mak5 nucleolar DEAD-box RNA helicase [Candida orthopsilosis Co
90-125]
gi|380351107|emb|CCG21330.1| Mak5 nucleolar DEAD-box RNA helicase [Candida orthopsilosis Co
90-125]
Length = 800
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 167/309 (54%), Gaps = 42/309 (13%)
Query: 175 WNE----LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
W+E + L P + + L F PTPIQK IP A +GK D++G A TGSGKTLA+G
Sbjct: 177 WSERELGVSLSPYTLNGLAILNFTTPTPIQKRTIPIAL-EGK-DVVGKATTGSGKTLAYG 234
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK-- 288
+PI+++ L+ ++ + ++EK H +I TPTRELA QV DHL ++A+
Sbjct: 235 IPILEKYLQSLDQVKQNVKEKK--------INHPNGVIFTPTRELAHQVVDHLNKLAQYS 286
Query: 289 GINVR-VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
++V+ +V + GG++ +KQ+RLLK P ++V TPGR EL + + VLD
Sbjct: 287 PLSVKGIVSVTGGLAIQKQQRLLKMGPGIIVATPGRFLELCENDPELAKRMSLTDIVVLD 346
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA- 406
EADR++++GHF E + I+++ G N +++ K QTLVFSAT +
Sbjct: 347 EADRLLQDGHFEEFEKILELF----GKNRPKNKNIAW----------KWQTLVFSATFSR 392
Query: 407 -LSADFRKKLKHGSLKLKQSVNGLNS-------IETLSERAGMRANVAI-VDLTNVSVLA 457
L K+ K KQ ++G NS IE L+E+ + I +D +++
Sbjct: 393 DLFGKLDKQQKPKIKNQKQQIDG-NSLVQNDEIIELLNEKLNFKDKKPILIDANPKEIVS 451
Query: 458 NKLEESFIE 466
++ E+ +E
Sbjct: 452 GQITEALVE 460
>gi|390352859|ref|XP_784112.3| PREDICTED: ATP-dependent RNA helicase DDX24-like
[Strongylocentrotus purpuratus]
Length = 934
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 121/204 (59%), Gaps = 26/204 (12%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L L++TPTRELA+QV +HL AK N++V +VGGMS EKQ+R+LK RP+++VGTPGR
Sbjct: 458 LFGLVLTPTRELAVQVKNHLVAAAKKTNIKVAVVVGGMSAEKQKRVLKKRPDIIVGTPGR 517
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
LWEL GE HL L + ++DEADRM+E GH+ EL I+D+L
Sbjct: 518 LWELYQLGEPHLASLPDVKCLIIDEADRMVEKGHYAELSEILDILN-------------- 563
Query: 384 TCVTVSSLQRKKRQTLVFSATIALS--ADFRKKLKHGSLKLKQSVNGLNSIETLSERAGM 441
+S QR RQT VFSAT++L RK LK + K+ + ++++ + G+
Sbjct: 564 -----TSEQRSSRQTFVFSATLSLIHLGPLRKSLKKAYKQDKK-----DKLDSVMAKIGI 613
Query: 442 RANVAIVDLTNVSVLANKLEESFI 465
+ + +VDLT A+ L ES I
Sbjct: 614 KEDAEVVDLTKREGTASSLLESKI 637
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+G D A E++ SE +ST W+ L + ++ +S+ +GF PTPIQ CIPAA ++GK
Sbjct: 232 SGEDTAGEKISSEVSMST----WDTLSIPTVVHESLQTMGFASPTPIQAGCIPAAINEGK 287
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLE 239
DI+GAAETGSGKTLAFG+P++ R+L+
Sbjct: 288 -DIVGAAETGSGKTLAFGIPLIYRILQ 313
>gi|400598353|gb|EJP66070.1| ATP-dependent RNA helicase MAK5 [Beauveria bassiana ARSEF 2860]
Length = 799
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 157/303 (51%), Gaps = 20/303 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W L L P + +I +LGF PT IQ+ IP G D+IG A+TGSGKTLAFG+PI+
Sbjct: 191 WVALNLSPATVSAIGKLGFASPTEIQEQTIPHIT--GGADVIGKAQTGSGKTLAFGIPIV 248
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+R LE + + E + E ++ KG + A+I++PTRELA Q+ DH+K + G+
Sbjct: 249 ERWLELHQSTDEEDEAEAEAKKER--KGPI-AVILSPTRELAKQIGDHIKALCDGLPTAA 305
Query: 295 VPIV----GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
P V GG+S +KQ+R L A+ ++V+GTPGRLWE++ G K E + F V+DEAD
Sbjct: 306 APYVCVVTGGLSIQKQQRQL-AKADIVIGTPGRLWEVLDGNMKLQDEFCRIQFLVVDEAD 364
Query: 351 RMIENGHFRELQSIIDML----PMTNGSNEGQSEQTQTCVTVSSLQR-KKRQTLVFSATI 405
R+ + G F+E + II L P + + ++ + + RQTLVFSAT
Sbjct: 365 RLFKAGQFKEAELIIGALDRRDPEAEDDSSDDEDFSEEEDEDADARHPPPRQTLVFSATF 424
Query: 406 --ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 463
L K + + Q + L + R +D V +A L E
Sbjct: 425 DKGLQTKLAGKTRPSA---SQGATDEEKMAYLMQCLKFRGQPKFIDANPVEQMAEGLREG 481
Query: 464 FIE 466
IE
Sbjct: 482 LIE 484
>gi|19112899|ref|NP_596107.1| ATP-dependent RNA helicase Mak5 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74582436|sp|O74393.1|MAK5_SCHPO RecName: Full=ATP-dependent RNA helicase mak5
gi|3560140|emb|CAA20727.1| ATP-dependent RNA helicase Mak5 (predicted) [Schizosaccharomyces
pombe]
Length = 648
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 153/300 (51%), Gaps = 50/300 (16%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
+ AW L P ++ S+ + GF +P PIQ IP A+ DIIG A+TGSGKTLAF
Sbjct: 119 VDVSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEAS--IGFDIIGKADTGSGKTLAF 176
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 289
G+PI++ L + KY ++AL++ PTRELA Q+ H + +
Sbjct: 177 GIPILEHCLRNVDA-------------KY-----VQALVVAPTRELAHQICQHFELIKPS 218
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV-ELHTLSFFVLDE 348
N+RV+ I GG++ +KQ+RLL P +VV TPGRLW +++ E +L + VLDE
Sbjct: 219 PNIRVMSITGGLAVQKQQRLLNKHPHVVVATPGRLWSVIN--ENNLTGNFKKIKCLVLDE 276
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--A 406
ADR+++ HF EL ++++L G TQ RQT +FSAT
Sbjct: 277 ADRLLQKSHFEELSKLLEIL--------GNPMHTQ------------RQTFIFSATFDEG 316
Query: 407 LSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
L +K +K G++ K + + +E + + +D S +A+++ E IE
Sbjct: 317 LQQRLKKNMK-GNITEKYN----SPMENMLKEVRFFGKPKFLDANPQSAVASRVLEGLIE 371
>gi|357459393|ref|XP_003599977.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355489025|gb|AES70228.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 828
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 134/240 (55%), Gaps = 49/240 (20%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
D++ +L L L+++ LG+ +PTPIQ ACIP A G+ DI G+A TGSGKT AF LP
Sbjct: 151 DSFLQLNLSRPLLRACEVLGYSKPTPIQAACIPLAL-TGR-DICGSAITGSGKTAAFALP 208
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKEVAKGI 290
++RLL + PK +R LI+TPTRELA QV +K +++
Sbjct: 209 TLERLL-------------------FRPKRVHAIRVLILTPTRELAAQVQSMIKSLSQFT 249
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
++R IVGG+ST++QE L++RP++VV TPGR+ + + V+L LS +LDEAD
Sbjct: 250 DIRCCLIVGGLSTKEQEVALRSRPDIVVATPGRMIDHLRNSMS--VDLDDLSVLILDEAD 307
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
R++E G E+Q ++ + P KKRQT++FSAT+ D
Sbjct: 308 RLLELGFSAEIQELVRVCP------------------------KKRQTMLFSATMTEEVD 343
>gi|358395256|gb|EHK44643.1| hypothetical protein TRIATDRAFT_172944, partial [Trichoderma
atroviride IMI 206040]
Length = 785
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 193/403 (47%), Gaps = 58/403 (14%)
Query: 97 RSSANEEDPGDGDGDEDGNGVQKEQEKNLKN----QKGKKKK------KKKKGKKIKTVE 146
R + +E G GDG +G V Q + K Q GKKK KK GKK K +
Sbjct: 115 RDAVDEPVEGPGDGAVEGENVDSGQAGDSKGGVEGQGGKKKAAGKDGAKKDAGKKQKARK 174
Query: 147 ESVTVSNGPDDAEEELVSEA----EISTEFDA-----------------WNELRLHPLLM 185
+ +N A++EL A + FDA W EL L ++
Sbjct: 175 DKDN-NNKLAAADKELQKPASRKQQQGNSFDALMAVGDAAAAEEADMGAWVELNLSTRIL 233
Query: 186 KSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 245
+I +LGF +PT IQ+ IP D+IG A+TGSGKTLAFG+PI+++ LE
Sbjct: 234 SAIAKLGFAKPTLIQEKTIPEIL--AGEDVIGKAQTGSGKTLAFGIPIVEKWLE------ 285
Query: 246 KMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--RVVPIVGGMST 303
L E+ ++ P A++++PTRELA Q++DH+K + G+ V + GG+S
Sbjct: 286 --LYEERRNVKREGPT----AVVLSPTRELAKQLSDHIKALCDGLPTAPYVCTVTGGLSI 339
Query: 304 EKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 363
KQ+R L+ + ++V+ TPGRLWE++ G + F V+DEADR+ + G F+E +
Sbjct: 340 HKQQRQLE-KADIVIATPGRLWEVLDGDMSLQNSFTKIKFLVVDEADRLFKAGQFKEAED 398
Query: 364 IIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLK 423
II L + + + RQTLVFSAT + + ++ + K
Sbjct: 399 IIGAL---------DRKDPDAEDDDDNEELPPRQTLVFSATFDKNLQSKLAVRGKAPKAG 449
Query: 424 QSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ +E L + R+ +D+ S +A+ L+E IE
Sbjct: 450 AGSSDEEKMEYLMKSLKFRSEPKFIDVNPASQMASGLKEGLIE 492
>gi|50557160|ref|XP_505988.1| YALI0F28391p [Yarrowia lipolytica]
gi|74659615|sp|Q6C024.1|PRP28_YARLI RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|49651858|emb|CAG78800.1| YALI0F28391p [Yarrowia lipolytica CLIB122]
Length = 575
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 145/242 (59%), Gaps = 22/242 (9%)
Query: 168 ISTEFDAWNELRLHPLLMK-SIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
I +WNE + P +++ +I R+G+KEPTPIQ+A IP A G D+IG AETGSGKT
Sbjct: 157 IPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIAL--GIRDVIGVAETGSGKT 214
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
+F +P++ + E L + E ++ P G LI+ PTRELA+Q+ D +
Sbjct: 215 ASFLIPLISYICE--------LPKLDERSKVNGPYG----LILAPTRELAMQIKDEAVKF 262
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
+ +VV +VGG S ++Q ++ EL+V TPGRL +++ ++ L+ L+ + V+
Sbjct: 263 CAPLGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDVI---DRRLLVLNQCCYVVM 319
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
DEADRM++ G ++Q ++ LP +N + S++ + VS+ R+ RQT++++AT+
Sbjct: 320 DEADRMVDMGFEEQVQKVLASLPSSNAKPD--SDEAENLAAVST--RRYRQTMMYTATMP 375
Query: 407 LS 408
++
Sbjct: 376 VA 377
>gi|226509858|ref|NP_001147574.1| ATP-dependent RNA helicase DRS1 [Zea mays]
gi|195612276|gb|ACG27968.1| ATP-dependent RNA helicase DRS1 [Zea mays]
Length = 770
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 145/264 (54%), Gaps = 51/264 (19%)
Query: 144 TVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
TVE++ T +GP D S + +++ EL L L+++ LG+++PTPIQ AC
Sbjct: 135 TVEQNET--SGPVDPSNFFASSEGATFHANSFLELNLSRPLVRACEALGYQKPTPIQAAC 192
Query: 204 IPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK-- 261
IP A G+ DI G+A TGSGKT AF LP+++RLL + PK
Sbjct: 193 IPLAL-TGR-DICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRV 231
Query: 262 GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTP 321
+R LI+TPTRELA QV ++++A+ ++R IVGG+ST+ QE L++ P++VV TP
Sbjct: 232 PAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATP 291
Query: 322 GRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQ 381
GR+ + + V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 292 GRIIDHLRNSLS--VGLEDLAVVILDEADRLLELGFSAEIQELIRMCP------------ 337
Query: 382 TQTCVTVSSLQRKKRQTLVFSATI 405
K+RQT++FSAT+
Sbjct: 338 ------------KRRQTMLFSATM 349
>gi|388852351|emb|CCF53966.1| related to MAK5-ATP-dependent RNA helicase [Ustilago hordei]
Length = 969
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 177/380 (46%), Gaps = 87/380 (22%)
Query: 171 EFD-----AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA------------------ 207
EFD AW+ L LHP L +++ GF +PT IQ +P A
Sbjct: 240 EFDDQLLPAWSHLPLHPALKRALAHKGFTKPTEIQDRSLPFALGLQSQQEAESSIDDSHE 299
Query: 208 ---------AHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKY 258
+ Q K D++G ++TGSGKTLA+GL I+ L E E A + E+
Sbjct: 300 DAKQATATSSSQKKRDVVGVSQTGSGKTLAYGLAILNHLFENAENAIASSSSRRNALEQV 359
Query: 259 APKGHLRALIITPTRELALQVTDHLKEVAKGINV---------------------RVVPI 297
P L ALI+ PTRELALQV+ HL E+ + + ++ +
Sbjct: 360 PPP--LGALILCPTRELALQVSSHLTEIVRASCIISADDDDDQAEISHKKLLGRPQIAVV 417
Query: 298 VGGMSTEKQERLLKARP---------ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
GGMS +KQ RLL+ R ++++ TPGRLWE+ + + F VLDE
Sbjct: 418 CGGMSEQKQRRLLQGRSRASDRQSGVDIIIATPGRLWEMTRLDDHLAARIKQTRFLVLDE 477
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSN-----EGQSEQTQTCVTVSSLQRKKR------- 396
ADRM++ GHF E++ I++++ T + +GQ Q + S +R+ +
Sbjct: 478 ADRMVQVGHFAEMEHILNLVNRTEARHPVPGKDGQQHQPHHHQSDSESEREVQTHRVKPS 537
Query: 397 ---QTLVFSATIALSADF----RKKLKHGSLK--LKQSVNGLNSIETLSERAGMR-ANVA 446
QT +FSAT++ + R+KLK + K K++ N +++ L R R A
Sbjct: 538 CNMQTFIFSATLSKTLQINLKKRRKLKQLTKKRHCKRNANS-TTLDELVSRIDFRDPTPA 596
Query: 447 IVDLTNVSVLANKLEESFIE 466
++DLT + L ++ +E
Sbjct: 597 VIDLTRAQGMPQGLMQTKLE 616
>gi|414886235|tpg|DAA62249.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 770
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 145/264 (54%), Gaps = 51/264 (19%)
Query: 144 TVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
TVE++ T +GP D S + +++ EL L L+++ LG+++PTPIQ AC
Sbjct: 135 TVEQNET--SGPVDPSNFFASSEGATFHANSFLELNLSRPLVRACEALGYQKPTPIQAAC 192
Query: 204 IPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK-- 261
IP A G+ DI G+A TGSGKT AF LP+++RLL + PK
Sbjct: 193 IPLAL-TGR-DICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRV 231
Query: 262 GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTP 321
+R LI+TPTRELA QV ++++A+ ++R IVGG+ST+ QE L++ P++VV TP
Sbjct: 232 PAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATP 291
Query: 322 GRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQ 381
GR+ + + V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 292 GRIIDHLRNSLS--VGLEDLAVVILDEADRLLELGFSAEIQELIRMCP------------ 337
Query: 382 TQTCVTVSSLQRKKRQTLVFSATI 405
K+RQT++FSAT+
Sbjct: 338 ------------KRRQTMLFSATM 349
>gi|167385322|ref|XP_001737297.1| ATP-dependent RNA helicase mak5 [Entamoeba dispar SAW760]
gi|165899942|gb|EDR26421.1| ATP-dependent RNA helicase mak5, putative [Entamoeba dispar SAW760]
Length = 586
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 54/298 (18%)
Query: 168 ISTEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+ E W +L +L +++++Y LGF PT IQ+ I A K D++G+A TGSGKT
Sbjct: 42 LVIEMKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHK-DVVGSAPTGSGKT 100
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
L+F +PI+QRL+E +K + + +II PTRELA+Q+ +H K++
Sbjct: 101 LSFLIPIVQRLIEL---------DKIDSTQ---------CVIIVPTRELAVQINEHFKKL 142
Query: 287 AKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFF 344
K + IVGGM+ KQ RLL P +V+GTPGRL+EL S E ++++ L + F
Sbjct: 143 IKYLPQFTSSVIVGGMAIPKQVRLLSQEPTIVIGTPGRLYELYSETEHNVLQTLPEIPFI 202
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
VLDEADR++E GHF EL ++D+ K++QT VFSAT
Sbjct: 203 VLDEADRLLEKGHFIELTKLLDV-----------------------FNNKEKQTFVFSAT 239
Query: 405 IALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEE 462
+ L+++ K K S NG + + + ++ M + ++D++ ++EE
Sbjct: 240 MILASEMMAK--------KYSSNGEDELTRMLQKLKMN-DTELIDVSTPQQTVEQMEE 288
>gi|358389222|gb|EHK26814.1| hypothetical protein TRIVIDRAFT_175608 [Trichoderma virens Gv29-8]
Length = 770
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 184/391 (47%), Gaps = 58/391 (14%)
Query: 106 GDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDD-------A 158
G GDG +G V Q + + K+ +KK +K + E+ N A
Sbjct: 110 GPGDGPVEGEDVHPGQAGDSQGGVESKRSQKKAARKDRAKEQKKEADNKHKSRDGKLATA 169
Query: 159 EEEL---VSEAEISTEFDA----------------WNELRLHPLLMKSIYRLGFKEPTPI 199
E+EL S + FDA W EL L + +I +LGF +PT I
Sbjct: 170 EKELQKPASHKQQGNSFDALMAVDDAAAEEADMGAWVELNLSTRTVSAIAKLGFSKPTLI 229
Query: 200 QKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYA 259
Q+ IP D+IG A+TGSGKTLAFG+PI+++ LE L ++
Sbjct: 230 QQKTIPEILAGD--DVIGKAQTGSGKTLAFGIPIVEKWLE--------LYVDKTNVKREG 279
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINV--RVVPIVGGMSTEKQERLLKARPELV 317
P A++++PTRELA Q++DH+K + G+ V + GG+S KQ+R L+ + ++V
Sbjct: 280 PT----AVVLSPTRELAKQISDHIKALCDGLPTAPYVCTVTGGLSIHKQQRQLE-KADIV 334
Query: 318 VGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEG 377
+ TPGRLWE++ G + F V+DEADR+ + G F+E + II L
Sbjct: 335 IATPGRLWEVLDGDMSLQDSFTKIKFLVVDEADRLFKAGQFKEAEDIIGAL--------- 385
Query: 378 QSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLN--SIETL 435
+ + RQTLVFSAT + + KL G K ++ G + +E L
Sbjct: 386 -DRRDPEADDEDDDELPPRQTLVFSAT--FDKNLQSKLA-GRGKGSKAAAGSDEEKMEYL 441
Query: 436 SERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ R +D+ VS +A+ L+E IE
Sbjct: 442 MKCLKFRGQPKFIDVNPVSQMADGLKEGLIE 472
>gi|9966805|ref|NP_065147.1| ATP-dependent RNA helicase DDX24 [Homo sapiens]
gi|18202929|sp|Q9GZR7.1|DDX24_HUMAN RecName: Full=ATP-dependent RNA helicase DDX24; AltName: Full=DEAD
box protein 24
gi|9931361|gb|AAG02169.1|AF214731_1 ATP-dependent RNA helicase [Homo sapiens]
gi|10437623|dbj|BAB15079.1| unnamed protein product [Homo sapiens]
gi|12053271|emb|CAB66820.1| hypothetical protein [Homo sapiens]
gi|14250756|gb|AAH08847.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Homo sapiens]
gi|14424802|gb|AAH09406.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Homo sapiens]
gi|117645896|emb|CAL38415.1| hypothetical protein [synthetic construct]
gi|119601957|gb|EAW81551.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_b [Homo
sapiens]
gi|123993695|gb|ABM84449.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [synthetic construct]
gi|124000001|gb|ABM87509.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [synthetic construct]
gi|208967745|dbj|BAG72518.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [synthetic construct]
Length = 859
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 362 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 420
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 421 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 480
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 481 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 521
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 522 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 248
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 249 IPMIHAVLQ 257
>gi|66911843|gb|AAH96826.1| DDX24 protein [Homo sapiens]
Length = 804
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 307 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 365
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 366 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 425
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 426 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 466
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 467 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 513
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 28/33 (84%)
Query: 207 AAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
AA + K+DI+GAAETGSGKTLAF +P++ +L+
Sbjct: 170 AAIRDKLDILGAAETGSGKTLAFAIPMIHAVLQ 202
>gi|414589947|tpg|DAA40518.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein,
partial [Zea mays]
Length = 786
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 145/264 (54%), Gaps = 51/264 (19%)
Query: 144 TVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
TV+++ T +GP D S S +++ EL L L+++ LG+++PTPIQ AC
Sbjct: 156 TVDQNDT--SGPVDPSNFFSSSDRASFHANSFLELNLSRPLVRACEALGYQKPTPIQAAC 213
Query: 204 IPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK-- 261
IP A G+ DI G+A TGSGKT AF LP+++RLL + PK
Sbjct: 214 IPLAL-TGR-DICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRV 252
Query: 262 GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTP 321
+R LI+TPTRELA Q+ ++++A+ ++R IVGG+ST+ QE L++ P++VV TP
Sbjct: 253 PAIRVLILTPTRELAAQIHSMVEKLAQFTDIRCCLIVGGLSTKIQEVALRSMPDIVVATP 312
Query: 322 GRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQ 381
GR+ + + V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 313 GRIIDHLRNSLS--VGLEDLAVVILDEADRLLELGFSAEIQELIRMCP------------ 358
Query: 382 TQTCVTVSSLQRKKRQTLVFSATI 405
K+RQT++FSAT+
Sbjct: 359 ------------KRRQTMLFSATM 370
>gi|197101980|ref|NP_001125038.1| ATP-dependent RNA helicase DDX24 [Pongo abelii]
gi|75061972|sp|Q5RDL2.1|DDX24_PONAB RecName: Full=ATP-dependent RNA helicase DDX24; AltName: Full=DEAD
box protein 24
gi|55726767|emb|CAH90145.1| hypothetical protein [Pongo abelii]
Length = 859
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 362 DKEQTGNLKQELDDKSATCKTY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 420
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 421 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 480
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 481 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 521
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 522 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQVLTL-APAIRDKLDILGAAETGSGKTLAFA 248
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 249 IPMIHAVLQ 257
>gi|426377845|ref|XP_004055664.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Gorilla gorilla
gorilla]
Length = 859
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 362 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 420
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 421 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 480
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 481 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 521
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 522 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 248
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 249 IPMIHAVLQ 257
>gi|402877046|ref|XP_003902254.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Papio anubis]
Length = 856
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 360 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 418
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 419 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 478
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 479 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 519
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 520 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 566
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ A A A + ++DI+GAAETGSGKTLAF
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQ-ALTLAPAIRDRLDILGAAETGSGKTLAFA 246
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 247 IPVIHAVLQ 255
>gi|119601958|gb|EAW81552.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_c [Homo
sapiens]
Length = 840
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 362 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 420
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 421 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 480
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 481 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 521
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 522 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ A A A + K+DI+GAAETGSGKTLAF
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQ-ALTLAPAIRDKLDILGAAETGSGKTLAFA 248
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 249 IPMIHAVLQ 257
>gi|149642575|ref|NP_001092515.1| ATP-dependent RNA helicase DDX24 [Bos taurus]
gi|148878167|gb|AAI46185.1| DDX24 protein [Bos taurus]
gi|296475209|tpg|DAA17324.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Bos taurus]
Length = 852
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 124/226 (54%), Gaps = 23/226 (10%)
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
+ E+AGK+ +E G PK L L++TPTRELA+QV H+ VAK +++ +VG
Sbjct: 361 DEEQAGKLKQELG--GSTVPPKRPLLGLVLTPTRELAVQVKQHVDAVAKFTSIKTAILVG 418
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
GMST+KQ+R+L +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 419 GMSTQKQQRMLNRQPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 478
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
EL +++ML S KRQTLVFSAT+ L ++ H
Sbjct: 479 ELSQLLEML-------------------SDSQYNPKRQTLVFSATLTLVHQAPARILHK- 518
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 519 -KHAKKMDKTAKLDLLMQKIGMRGKPKVIDLTRKEATVETLTETKI 563
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 247
Query: 231 LPIMQRLL 238
+P++ +L
Sbjct: 248 IPMIDAVL 255
>gi|414589946|tpg|DAA40517.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 773
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 145/264 (54%), Gaps = 51/264 (19%)
Query: 144 TVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
TV+++ T +GP D S S +++ EL L L+++ LG+++PTPIQ AC
Sbjct: 140 TVDQNDT--SGPVDPSNFFSSSDRASFHANSFLELNLSRPLVRACEALGYQKPTPIQAAC 197
Query: 204 IPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK-- 261
IP A G+ DI G+A TGSGKT AF LP+++RLL + PK
Sbjct: 198 IPLAL-TGR-DICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRV 236
Query: 262 GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTP 321
+R LI+TPTRELA Q+ ++++A+ ++R IVGG+ST+ QE L++ P++VV TP
Sbjct: 237 PAIRVLILTPTRELAAQIHSMVEKLAQFTDIRCCLIVGGLSTKIQEVALRSMPDIVVATP 296
Query: 322 GRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQ 381
GR+ + + V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 297 GRIIDHLRNSLS--VGLEDLAVVILDEADRLLELGFSAEIQELIRMCP------------ 342
Query: 382 TQTCVTVSSLQRKKRQTLVFSATI 405
K+RQT++FSAT+
Sbjct: 343 ------------KRRQTMLFSATM 354
>gi|194383912|dbj|BAG59314.1| unnamed protein product [Homo sapiens]
Length = 766
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 269 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 327
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 328 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 387
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 388 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 428
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 429 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 475
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 193 FKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
F+ P +A A A + K+DI+GAAETGSGKTLAF +P++ +L+
Sbjct: 118 FEVKDPELEALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIHAVLQ 164
>gi|62088344|dbj|BAD92619.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 variant [Homo sapiens]
Length = 676
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 368 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 426
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 427 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 486
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 487 HFAELSQLLEML------NDSQ-------------YNPKRQTLVFSATLTLVHQAPARIL 527
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 528 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 574
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 196 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 254
Query: 231 LPIMQRLLEEREK 243
+P++ +L+ +++
Sbjct: 255 IPMIHAVLQWQKR 267
>gi|403347561|gb|EJY73206.1| ATP-dependent RNA helicase DDX24 [Oxytricha trifallax]
Length = 780
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 128/200 (64%), Gaps = 18/200 (9%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQ-KACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
W + + L +S+ F +PT +Q ++ + AH VD++ AA+TG GKTL FG+PI
Sbjct: 35 WMQFDMSEELAESLVANQFVQPTDVQAQSLVFLNAH---VDMVIAAKTGQGKTLTFGIPI 91
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA---KGI 290
+ L++ ++++++ E E++ ++ALI++PTRELA+Q+ DH++ V
Sbjct: 92 LDLLIK------RLIKDQSGEPEEFTS---IKALIMSPTRELAIQIKDHIQAVVPVQYQN 142
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE--LHTLSFFVLDE 348
+++ P+VGGMS +KQERLL P +V+ TPGRLWEL++ ++ L + VLDE
Sbjct: 143 KIKLCPLVGGMSIQKQERLLSYNPTIVIATPGRLWELLNERMNPYLQSALPMIDVLVLDE 202
Query: 349 ADRMIENGHFRELQSIIDML 368
ADRMIE+GHF+E++ I+D +
Sbjct: 203 ADRMIEDGHFKEMKYILDYV 222
>gi|119601956|gb|EAW81550.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_a [Homo
sapiens]
Length = 670
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 362 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 420
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 421 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 480
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 481 HFAELSQLLEML------NDSQ-------------YNPKRQTLVFSATLTLVHQAPARIL 521
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 522 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 248
Query: 231 LPIMQRLLEEREK 243
+P++ +L+ +++
Sbjct: 249 IPMIHAVLQWQKR 261
>gi|355693530|gb|EHH28133.1| hypothetical protein EGK_18492 [Macaca mulatta]
gi|387541990|gb|AFJ71622.1| ATP-dependent RNA helicase DDX24 [Macaca mulatta]
Length = 856
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 360 DKEQIGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 418
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 419 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 478
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 479 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 519
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 520 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 566
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + ++DI+GAAETGSGKTLAF
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-APAIRDRLDILGAAETGSGKTLAFA 246
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 247 IPVIHAVLQ 255
>gi|407041314|gb|EKE40660.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 600
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 139/250 (55%), Gaps = 45/250 (18%)
Query: 168 ISTEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+ E W +L +L +++++Y LGF PT IQ+ I A K DI+G+A TGSGKT
Sbjct: 56 LMIEMKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHK-DIVGSAPTGSGKT 114
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
L+F +PI+QRL+E +K + + +II PTRELA+Q+ +H K++
Sbjct: 115 LSFLIPIVQRLIEL---------DKTDSTQ---------CVIIVPTRELAVQINEHFKKL 156
Query: 287 AKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFF 344
K + + IVGGM+ KQ RLL P +V+GTPGRL+EL S E ++++ L + F
Sbjct: 157 IKYLPQFTSLVIVGGMAIPKQVRLLSQEPTIVIGTPGRLYELYSETEHNVLQTLPEIPFI 216
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
VLDEADR++E GHF + ++D+ K++QT VFSAT
Sbjct: 217 VLDEADRLLEKGHFVDFTKLLDI-----------------------FNNKEKQTFVFSAT 253
Query: 405 IALSADFRKK 414
+ L+++ K
Sbjct: 254 MILASEMMAK 263
>gi|397525830|ref|XP_003832856.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Pan paniscus]
Length = 859
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 126/228 (55%), Gaps = 25/228 (10%)
Query: 241 REKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
+E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++ +
Sbjct: 363 KEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAIL 421
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GH
Sbjct: 422 VGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGH 481
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 417
F EL +++ML N+ Q KRQTLVFSAT+ L ++ H
Sbjct: 482 FAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARILH 522
Query: 418 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 523 K--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A + K+DI+GAAETGSGKTLAF
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-VPAIRDKLDILGAAETGSGKTLAFA 248
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 249 IPMIHVVLQ 257
>gi|380814882|gb|AFE79315.1| ATP-dependent RNA helicase DDX24 [Macaca mulatta]
Length = 856
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 360 DKEQIGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 418
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 419 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 478
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 479 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 519
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 520 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 566
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + ++DI+GAAETGSGKTLAF
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-APAIRDRLDILGAAETGSGKTLAFA 246
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 247 IPVIHAVLQ 255
>gi|194385874|dbj|BAG65312.1| unnamed protein product [Homo sapiens]
Length = 609
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 112 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 170
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 171 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 230
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 231 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 271
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 272 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 318
>gi|355778814|gb|EHH63850.1| hypothetical protein EGM_16904 [Macaca fascicularis]
Length = 856
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 360 DKEQIGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 418
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 419 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 478
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 479 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 519
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 520 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 566
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ A A A + ++DI+GAAETGSGKTLAF
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQ-ALTLAPAIRDRLDILGAAETGSGKTLAFA 246
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 247 IPVIHAVLQ 255
>gi|194386302|dbj|BAG59715.1| unnamed protein product [Homo sapiens]
Length = 763
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 319 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 377
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 378 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 437
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 438 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 478
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 479 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 525
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 147 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 205
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 206 IPMIHAVLQ 214
>gi|367013592|ref|XP_003681296.1| hypothetical protein TDEL_0D05010 [Torulaspora delbrueckii]
gi|359748956|emb|CCE92085.1| hypothetical protein TDEL_0D05010 [Torulaspora delbrueckii]
Length = 750
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 167/308 (54%), Gaps = 49/308 (15%)
Query: 171 EFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
EF WN+L +L ++ + +LGF +PT IQ IP A +G+ DI+G A TGSGKTLA+
Sbjct: 171 EFPEWNKLGKLSVTTLQGLTKLGFSKPTDIQAKAIPEAM-KGE-DIMGKAATGSGKTLAY 228
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 289
G+PI++++L ++++ + ALI TPTRELA QVT HL+++ +
Sbjct: 229 GIPILEKMLNNKDQSKAI------------------ALIFTPTRELAQQVTKHLQQIGEL 270
Query: 290 I----NVRVVPIVGGMSTEKQERLLK--ARPELVVGTPGRLWELMSGGEKHLVELHTLSF 343
I ++ + GG+S +KQERLLK +VV TPGR EL+ E + +
Sbjct: 271 ILKKSPYAIMSLTGGLSIQKQERLLKYDGSARVVVATPGRFLELIEKNESLVKRFAKIDT 330
Query: 344 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 403
VLDEADR++++GHF E + I+ L G S + S+ +++ QT++FSA
Sbjct: 331 LVLDEADRLLQDGHFDEFEKILKYL--------GNSRK-------STDKKEGWQTMIFSA 375
Query: 404 TIALSADFRKKLKHGSL-KLKQSVNGLNSIET----LSERAGMRANVAIVDLTNVSVLAN 458
T A+ D KL S K K+ + +E L + ++ I+D + +++
Sbjct: 376 TFAM--DLFNKLSTTSWSKFKKGKENASEMEIVLQHLMTKIHFKSKPVIIDTDSEQRVSS 433
Query: 459 KLEESFIE 466
+++ES IE
Sbjct: 434 RIKESLIE 441
>gi|150951560|ref|XP_001387897.2| ATP-dependent RNA helicase [Scheffersomyces stipitis CBS 6054]
gi|284018096|sp|A3GG51.2|MAK5_PICST RecName: Full=ATP-dependent RNA helicase MAK5
gi|149388695|gb|EAZ63874.2| ATP-dependent RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 836
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 123/217 (56%), Gaps = 13/217 (5%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
L P + + LGF +PTPIQK IP AA +GK D++G A TGSGKTLA+G+PI+++ L
Sbjct: 229 LSPYTLHGLSVLGFDKPTPIQKKTIPLAA-EGK-DVVGKAITGSGKTLAYGIPILEKYLS 286
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR---VVP 296
+ ++K H +I PTRELA QV HL +AK + +V
Sbjct: 287 NLSIINQNRQKK--------IINHPTGIIFAPTRELAHQVVSHLNSLAKYSPLSTNGIVS 338
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
I GG+S +KQERLL P ++V TPGR+ EL+ E L + VLDEADR++++G
Sbjct: 339 ITGGLSIQKQERLLSHGPGIIVATPGRILELLQKDEDLTKRLASTDIIVLDEADRLLQDG 398
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 393
HF E ++I+D+ N+ + QT V ++ R
Sbjct: 399 HFEEFETILDLFRKNRPKNKTFPWKWQTLVFSATFSR 435
>gi|84578997|dbj|BAE72932.1| hypothetical protein [Macaca fascicularis]
Length = 819
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 323 DKEQIGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 381
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 382 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 441
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 442 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 482
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 483 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 529
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + ++DI+GAAETGSGKTLAF
Sbjct: 151 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-APAIRDRLDILGAAETGSGKTLAFA 209
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 210 IPVIHAVLQ 218
>gi|444320517|ref|XP_004180915.1| hypothetical protein TBLA_0E03420 [Tetrapisispora blattae CBS 6284]
gi|387513958|emb|CCH61396.1| hypothetical protein TBLA_0E03420 [Tetrapisispora blattae CBS 6284]
Length = 742
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 160/313 (51%), Gaps = 50/313 (15%)
Query: 168 ISTEFDAWN----ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
I +E W +L H L +++ RLGF++PT IQK IP DI+G A TGS
Sbjct: 168 IPSELPHWCNEIPDLSFHTL--ETLSRLGFQKPTEIQKKSIPIVMK--GTDILGKASTGS 223
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 283
GKTLA+G+PI++++L K G++ E G +I TPTRELA QV HL
Sbjct: 224 GKTLAYGIPIIEKILSNL-KEGQLNETSG--------------IIFTPTRELAQQVGRHL 268
Query: 284 KEVAKGINVR---VVPIVGGMSTEKQERLL---KARPELVVGTPGRLWELMSGGEKHLVE 337
E G + ++ I GG+S +KQER+L K +++V TPGR E++ EK+L
Sbjct: 269 NEFVWGDHFNSSSIITITGGLSLQKQERILGYGKGAGQIIVSTPGRFLEIIEKDEKYLER 328
Query: 338 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 397
+ VLDEADR+I++GHF E + I+ +L SN+ + + Q Q
Sbjct: 329 FSKIDILVLDEADRLIQDGHFEEFERILKLL-----SNKRRELKEQGY----------WQ 373
Query: 398 TLVFSATIALSADFRKKLKHGS----LKLKQSVNGLNSIETLSERAGMRANVAIVDLTNV 453
TLV+SAT +L +KL G+ KL Q + L E+ R +VD+
Sbjct: 374 TLVYSATFSLG--LFEKLDKGNKWNKKKLNQEEELDEVVNKLMEKIHFRQKPLVVDIDPF 431
Query: 454 SVLANKLEESFIE 466
+ ++ E+ IE
Sbjct: 432 EQMNKQIHETLIE 444
>gi|344232121|gb|EGV64000.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 809
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 126/235 (53%), Gaps = 28/235 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+ L L + + L F PTPIQK IP +G+ DIIG A TGSGKTLA+G+PI+
Sbjct: 169 WSSLSLSGYALTGLNELKFTSPTPIQKKSIPLGL-EGR-DIIGKATTGSGKTLAYGIPIL 226
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR- 293
++ L E ++ + +P G ++ PTRELA QV DHL ++K +
Sbjct: 227 EKYLSNLE----TIKANRKNGIINSPTG----IVFVPTRELAHQVVDHLNNISKFYPLPP 278
Query: 294 --VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+V I GG+S +KQERLLK P L+V TPGR EL E+ L + VLDEADR
Sbjct: 279 NGIVSITGGLSIQKQERLLKFGPGLIVATPGRFLELSEKDEELLKRWSSTDIVVLDEADR 338
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
++++GHF E + I+++ N L K QTLVFSAT A
Sbjct: 339 LLQDGHFDEFEKILELFKKHRPGN---------------LATWKWQTLVFSATFA 378
>gi|207347639|gb|EDZ73745.1| YBR142Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|290878158|emb|CBK39217.1| Mak5p [Saccharomyces cerevisiae EC1118]
Length = 769
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 174/342 (50%), Gaps = 52/342 (15%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA----------WNELR-LHPLLMKSIYRLGFKE 195
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 196 PTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEA 255
PT IQK IP QG VD++G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QG-VDVMGKASTGSGKTLAYGIPIVEKLISNFSRKNK--------- 238
Query: 256 EKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLK 311
P +LI TPTRELA QVTDHLK++ + + ++ + GG+S +KQ+RLLK
Sbjct: 239 ---KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLK 291
Query: 312 ARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L
Sbjct: 292 YDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLL 351
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQS 425
+ N SE + K QTL+FSAT S D KL + K +
Sbjct: 352 VERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSSRQVKDRRFKNN 399
Query: 426 VNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 400 EDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 441
>gi|190408703|gb|EDV11968.1| ATP-dependent RNA helicase MAK5 [Saccharomyces cerevisiae RM11-1a]
Length = 769
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 174/342 (50%), Gaps = 52/342 (15%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA----------WNELR-LHPLLMKSIYRLGFKE 195
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 196 PTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEA 255
PT IQK IP QG VD++G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QG-VDVMGKASTGSGKTLAYGIPIVEKLISNFSRKNK--------- 238
Query: 256 EKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLK 311
P +LI TPTRELA QVTDHLK++ + + ++ + GG+S +KQ+RLLK
Sbjct: 239 ---KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLK 291
Query: 312 ARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L
Sbjct: 292 YDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLL 351
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQS 425
+ N SE + K QTL+FSAT S D KL + K +
Sbjct: 352 VERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSSRQVKDRRFKNN 399
Query: 426 VNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 400 EDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 441
>gi|67463088|ref|XP_648201.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56464242|gb|EAL42815.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 600
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 54/298 (18%)
Query: 168 ISTEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+ E W +L +L +++++Y LGF PT IQ+ I A K DI+G+A TGSGKT
Sbjct: 56 LMIEMKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHK-DIVGSAPTGSGKT 114
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
L+F +PI+QRL+E +K + + +II PTRELA+Q+ +H K++
Sbjct: 115 LSFLIPIVQRLIEL---------DKTDSTQ---------CVIIVPTRELAVQINEHFKKL 156
Query: 287 AKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFF 344
K + + IVGGM+ KQ RLL P +V+GTPGR++EL S E ++++ L + F
Sbjct: 157 IKYLPQFTSLVIVGGMAIPKQVRLLSQEPTIVIGTPGRIYELYSETEHNVLQTLPEIPFI 216
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
VLDEADR++E GHF + ++D+ K++QT VFSAT
Sbjct: 217 VLDEADRLLEKGHFVDFTKLLDI-----------------------FNNKEKQTFVFSAT 253
Query: 405 IALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEE 462
+ L+++ K K S NG + + + ++ + + ++D++ ++EE
Sbjct: 254 MILASEMMAK--------KYSSNGEDELTRMLQKLKLN-DAELIDISTPQQTVEQMEE 302
>gi|294658482|ref|XP_460822.2| DEHA2F10538p [Debaryomyces hansenii CBS767]
gi|218511820|sp|Q6BLU9.2|PRP28_DEBHA RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|202953164|emb|CAG89165.2| DEHA2F10538p [Debaryomyces hansenii CBS767]
Length = 580
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 136/242 (56%), Gaps = 20/242 (8%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYR-LGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSG 224
+I W E +L L+ + + LG+ PTPIQ+A IP A + G+ DI+G AETGSG
Sbjct: 147 GDIENPLRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALN-GR-DIVGIAETGSG 204
Query: 225 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 284
KTLAF LP+ +L + +L E +E+ P G LI+ PTRELALQ+T K
Sbjct: 205 KTLAFLLPLFSYILSV--DSNYLLYEHQQESNFNKPLG----LILAPTRELALQITKEAK 258
Query: 285 EVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
+N+ VV I+GG E+ ++ +VV TPGRL + + E+ ++ L FF
Sbjct: 259 LFGDKLNLNVVTIIGGHQYEETVHSVRNGVHIVVATPGRLIDSL---ERGIINLSNCYFF 315
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
+DEAD+MI+ G + LQSI++ LP SE+ +T + KKR TL+F+AT
Sbjct: 316 TMDEADKMIDMGFEKSLQSILNYLP--------ASEKLETTIDGKIFNIKKRITLMFTAT 367
Query: 405 IA 406
I+
Sbjct: 368 IS 369
>gi|160409988|sp|A6ZL85.1|MAK5_YEAS7 RecName: Full=ATP-dependent RNA helicase MAK5; AltName:
Full=Maintenance of killer protein 5
gi|151946532|gb|EDN64754.1| maintenance of killer [Saccharomyces cerevisiae YJM789]
Length = 769
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 174/342 (50%), Gaps = 52/342 (15%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA----------WNELR-LHPLLMKSIYRLGFKE 195
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 196 PTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEA 255
PT IQK IP QG VD++G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QG-VDVMGKASTGSGKTLAYGIPIVEKLISNFSQKNK--------- 238
Query: 256 EKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLK 311
P +LI TPTRELA QVTDHLK++ + + ++ + GG+S +KQ+RLLK
Sbjct: 239 ---KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLK 291
Query: 312 ARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L
Sbjct: 292 YDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLL 351
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQS 425
+ N SE + K QTL+FSAT S D KL + K +
Sbjct: 352 VERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSSRQVKDRRFKNN 399
Query: 426 VNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 400 EDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 441
>gi|449705204|gb|EMD45301.1| ATP-dependent RNA helicase mak5, putative [Entamoeba histolytica
KU27]
Length = 600
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 54/298 (18%)
Query: 168 ISTEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+ E W +L +L +++++Y LGF PT IQ+ I A K DI+G+A TGSGKT
Sbjct: 56 LMIEMKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHK-DIVGSAPTGSGKT 114
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
L+F +PI+QRL+E +K + + +II PTRELA+Q+ +H K++
Sbjct: 115 LSFLIPIVQRLIEL---------DKTDSTQ---------CVIIVPTRELAVQINEHFKKL 156
Query: 287 AKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFF 344
K + + IVGGM+ KQ RLL P +V+GTPGR++EL S E ++++ L + F
Sbjct: 157 IKYLPQFTSLVIVGGMAIPKQVRLLSQEPTIVIGTPGRIYELYSETEHNVLQTLPEIPFI 216
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
VLDEADR++E GHF + ++D+ K++QT VFSAT
Sbjct: 217 VLDEADRLLEKGHFVDFTKLLDI-----------------------FNNKEKQTFVFSAT 253
Query: 405 IALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEE 462
+ L+++ K K S NG + + + ++ + + ++D++ ++EE
Sbjct: 254 MILASEMMAK--------KYSSNGEDELTRMLQKLKLN-DAELIDISTPQQTVEQIEE 302
>gi|440905703|gb|ELR56052.1| ATP-dependent RNA helicase DDX24 [Bos grunniens mutus]
Length = 850
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 124/226 (54%), Gaps = 23/226 (10%)
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
+ E+AGK+ +E G PK L L++TPTRELA+QV H+ VAK +++ +VG
Sbjct: 361 DEEQAGKLKQELG--GSTVPPKRPLLGLVLTPTRELAVQVKQHVDAVAKFTSIKTAILVG 418
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
GMST+KQ+RLL +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 419 GMSTQKQQRLLNRQPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 478
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
EL ++++L S KRQTLVFSAT+ L ++ H
Sbjct: 479 ELSQLLEVL-------------------SDSQYNPKRQTLVFSATLTLVHQAPARILHK- 518
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 519 -KHAKKMDKTAKLDLLMQKIGMRGKPKVIDLTRKEATVETLTETKI 563
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 247
Query: 231 LPIMQRLL 238
+P++ +L
Sbjct: 248 IPMIDAVL 255
>gi|118372814|ref|XP_001019601.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89301368|gb|EAR99356.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 1093
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 123/196 (62%), Gaps = 11/196 (5%)
Query: 175 WNELRL-HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
W++ L HP +++S+ F PT IQ + ++ D + A++TGSGKTL+FG+PI
Sbjct: 9 WSKWDLIHPQVLQSLKDNNFNNPTEIQAYVL--NTYRNYNDFLIASQTGSGKTLSFGIPI 66
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI--N 291
+ +L ++ A ++ ++ EKY +R LII PTREL LQ+ HL ++++
Sbjct: 67 VSEILYDKSGAFAEKKKDQKKKEKY-----IRCLIIAPTRELVLQIEKHLNQISQNSKDQ 121
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFFVLDEAD 350
+R+ IVGG+S EKQ R+L P++++ TPGRLW+++ E +E L+ L + VLDEAD
Sbjct: 122 IRIGSIVGGISKEKQRRILSYVPDILIATPGRLWDMIDNYEHECLEKLYMLDYLVLDEAD 181
Query: 351 RMIENGHFRELQSIID 366
RM+E GHF EL I++
Sbjct: 182 RMVELGHFDELDKILE 197
>gi|45190633|ref|NP_984887.1| AER027Wp [Ashbya gossypii ATCC 10895]
gi|74693626|sp|Q757I6.1|MAK5_ASHGO RecName: Full=ATP-dependent RNA helicase MAK5
gi|44983612|gb|AAS52711.1| AER027Wp [Ashbya gossypii ATCC 10895]
gi|374108110|gb|AEY97017.1| FAER027Wp [Ashbya gossypii FDAG1]
Length = 752
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 162/319 (50%), Gaps = 56/319 (17%)
Query: 163 VSEAEISTEFDAW-NELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAET 221
+ EAE + E +W N ++L +++ + RLGF PT IQ IP A DI+G A T
Sbjct: 170 LDEAE-APELPSWTNTMKLSATVLQGLSRLGFSNPTEIQLQSIPKALDGH--DIMGKAST 226
Query: 222 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 281
GSGKTLA+G+PI++ ++ + + P G LI TPTRELA QVTD
Sbjct: 227 GSGKTLAYGIPILEGIIRDDTDS--------------RPIG----LIFTPTRELAHQVTD 268
Query: 282 HLKEVAKGINVR----VVPIVGGMSTEKQERLLKAR--PELVVGTPGRLWELMSGGEKHL 335
HL+EV + R ++ + GG+S +KQERLLK + +VV TPGR EL+ + +
Sbjct: 269 HLREVGALLVKRNPYSIMCLTGGLSIQKQERLLKYKGSARVVVATPGRFLELLEKDQTLI 328
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLP----MTNGSNEGQSEQTQTCVTVSSL 391
+ VLDEADR++++GHF E + I+ L TNG G
Sbjct: 329 DRFAKVDTLVLDEADRLLQDGHFEEFERILKHLSRARKFTNGKKHGW------------- 375
Query: 392 QRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIE----TLSERAGMRANVAI 447
+T+++SAT +L D+ KL + S K + N +E L + R I
Sbjct: 376 -----KTMIYSATFSL--DYFNKLSNTSWKKMKKAPSENEMEEVLKHLMTKIPFRGKPLI 428
Query: 448 VDLTNVSVLANKLEESFIE 466
+D +A++++ES IE
Sbjct: 429 IDTNPEQKVASQIKESLIE 447
>gi|256268948|gb|EEU04293.1| Mak5p [Saccharomyces cerevisiae JAY291]
Length = 769
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 174/342 (50%), Gaps = 52/342 (15%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA----------WNELR-LHPLLMKSIYRLGFKE 195
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 196 PTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEA 255
PT IQK IP QG VD++G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QG-VDVMGKASTGSGKTLAYGIPIVEKLISNFSQKNK--------- 238
Query: 256 EKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLK 311
P +LI TPTRELA QVTDHLK++ + + ++ + GG+S +KQ+RLLK
Sbjct: 239 ---KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLK 291
Query: 312 ARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L
Sbjct: 292 YDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLL 351
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQS 425
+ N SE + K QTL+FSAT S D KL + K +
Sbjct: 352 VERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSSRQVKDRRFKNN 399
Query: 426 VNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 400 EDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 441
>gi|323334595|gb|EGA75969.1| Mak5p [Saccharomyces cerevisiae AWRI796]
Length = 700
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 174/342 (50%), Gaps = 52/342 (15%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA----------WNELR-LHPLLMKSIYRLGFKE 195
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 196 PTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEA 255
PT IQK IP QG VD++G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QG-VDVMGKASTGSGKTLAYGIPIVEKLISNFSRKNK--------- 238
Query: 256 EKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLK 311
P +LI TPTRELA QVTDHLK++ + + ++ + GG+S +KQ+RLLK
Sbjct: 239 ---KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLK 291
Query: 312 ARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L
Sbjct: 292 YDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLL 351
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQS 425
+ N SE + K QTL+FSAT S D KL + K +
Sbjct: 352 VERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSSRQVKDRRFKNN 399
Query: 426 VNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 400 EDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 441
>gi|395827747|ref|XP_003787057.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Otolemur garnettii]
Length = 861
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 117/209 (55%), Gaps = 21/209 (10%)
Query: 257 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 316
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+LK PE+
Sbjct: 384 KAYPKHPLLGLVLTPTRELAVQVRQHIDAVAKFTGIKTAILVGGMSTQKQQRMLKRCPEI 443
Query: 317 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 376
V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML N+
Sbjct: 444 VIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML------ND 497
Query: 377 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 436
Q KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 498 SQYN-------------PKRQTLVFSATLTLIHQVPARILHK--KHTKKMDKTAKLDLLM 542
Query: 437 ERAGMRANVAIVDLTNVSVLANKLEESFI 465
++ GMR+ ++DLT L E+ I
Sbjct: 543 QKIGMRSKPKVIDLTRKEATVETLTETKI 571
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
T + P A+ + ++ + AW +L + +++++ LGF PTPIQ A A A
Sbjct: 167 TTAKVPKQAKTWMPEVSDQKADVSAWKDLFVPKPVLRALSFLGFSAPTPIQ-ALTLAPAI 225
Query: 210 QGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
+ K+DI+GAAETGSGKTLAF +P++ +L+ +++
Sbjct: 226 RDKLDILGAAETGSGKTLAFAIPVIHAVLQWQKR 259
>gi|114654532|ref|XP_001151974.1| PREDICTED: ATP-dependent RNA helicase DDX24 isoform 6 [Pan
troglodytes]
gi|410227214|gb|JAA10826.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
gi|410252476|gb|JAA14205.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
gi|410299418|gb|JAA28309.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
gi|410331293|gb|JAA34593.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
Length = 859
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 124/228 (54%), Gaps = 25/228 (10%)
Query: 241 REKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
+E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++ +
Sbjct: 363 KEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAIL 421
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GH
Sbjct: 422 VGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGH 481
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 417
F EL +++ML S KRQTLVFSAT+ L ++ H
Sbjct: 482 FAELSQLLEML-------------------SDSQYNPKRQTLVFSATLTLVHQAPARILH 522
Query: 418 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 523 K--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A + K+DI+GAAETGSGKTLAF
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-VPAIRDKLDILGAAETGSGKTLAFA 248
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 249 IPMIHAVLQ 257
>gi|343962287|dbj|BAK62731.1| ATP-dependent RNA helicase DDX24 [Pan troglodytes]
Length = 859
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 124/228 (54%), Gaps = 25/228 (10%)
Query: 241 REKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
+E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++ +
Sbjct: 363 KEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAIL 421
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GH
Sbjct: 422 VGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGH 481
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 417
F EL +++ML S KRQTLVFSAT+ L ++ H
Sbjct: 482 FAELSQLLEML-------------------SDSQYNPKRQTLVFSATLTLVHQAPARILH 522
Query: 418 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 523 K--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A + K+DI+GAAETGSGKTLAF
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-VPAIRDKLDILGAAETGSGKTLAFA 248
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 249 IPMIHAVLQ 257
>gi|417405017|gb|JAA49234.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 863
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 123/228 (53%), Gaps = 23/228 (10%)
Query: 240 EREKAGKMLEEKGEEAE--KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
+ E GK+ +E G E K PK L L++TPTRELA+QV H+ VA+ ++ +
Sbjct: 364 DEEWTGKLEQELGGETVTCKAHPKRPLLGLVLTPTRELAVQVKQHMDAVARFTGIKTAIL 423
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGGMST+KQ+R+L +PE+VV TPGRLWEL+ HL L L V+DEADRM+E GH
Sbjct: 424 VGGMSTQKQQRMLNRQPEIVVATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGH 483
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 417
F EL +++ML S KRQTLVFSAT+ L ++ H
Sbjct: 484 FAELSQLLEML-------------------SDSQYNPKRQTLVFSATLTLVHQAPARILH 524
Query: 418 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 525 K--KHTKKIDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 570
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFTAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 247
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 248 IPMIHSVLQ 256
>gi|335292920|ref|XP_003356831.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Sus scrofa]
Length = 856
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 116/206 (56%), Gaps = 21/206 (10%)
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+V+
Sbjct: 381 PKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRQPEIVIA 440
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQS 379
TPGRLWEL+ + HL L L V+DEADRM+E GHF EL +++ML N+ Q
Sbjct: 441 TPGRLWELVKEKQPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML------NDSQY 494
Query: 380 EQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERA 439
KRQTLVFSAT+ L ++ H K + ++ ++ L ++
Sbjct: 495 N-------------PKRQTLVFSATLTLVHQAPARILHK--KHAKKIDKTAKLDLLMQKI 539
Query: 440 GMRANVAIVDLTNVSVLANKLEESFI 465
GMR ++DLT L E+ I
Sbjct: 540 GMRGKPKVIDLTRNEATVETLTETKI 565
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 247
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 248 IPMIHAVLQ 256
>gi|365766859|gb|EHN08348.1| Mak5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 769
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 173/342 (50%), Gaps = 52/342 (15%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA----------WNELR-LHPLLMKSIYRLGFKE 195
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 196 PTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEA 255
PT IQK IP QG VD++G A TGSGKTLA+G+PI+++L+ K
Sbjct: 190 PTEIQKKSIPVIM-QG-VDVMGKASTGSGKTLAYGIPIVEKLISNFSXKNK--------- 238
Query: 256 EKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLK 311
P +LI TPTRELA QVTDHLK++ + + ++ + GG+S +KQ+RLLK
Sbjct: 239 ---KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLK 291
Query: 312 ARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L
Sbjct: 292 YDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLL 351
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQS 425
+ N SE + K QTL+FSAT S D KL + K +
Sbjct: 352 VERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSSRQVKDRRFKNN 399
Query: 426 VNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 400 EDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 441
>gi|6319618|ref|NP_009700.1| Mak5p [Saccharomyces cerevisiae S288c]
gi|586550|sp|P38112.1|MAK5_YEAST RecName: Full=ATP-dependent RNA helicase MAK5; AltName:
Full=Maintenance of killer protein 5
gi|536442|emb|CAA85100.1| MAK5 [Saccharomyces cerevisiae]
gi|547578|emb|CAA55539.1| YBR1119 [Saccharomyces cerevisiae]
gi|285810473|tpg|DAA07258.1| TPA: Mak5p [Saccharomyces cerevisiae S288c]
gi|392300984|gb|EIW12073.1| Mak5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 773
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 159/304 (52%), Gaps = 42/304 (13%)
Query: 175 WNELR-LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
W L L +++S+ L F PT IQK IP QG VD++G A TGSGKTLA+G+PI
Sbjct: 172 WTNLAPLSMTILQSLQNLNFLRPTEIQKKSIPVIM-QG-VDVMGKASTGSGKTLAYGIPI 229
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI--- 290
+++L+ + K P +LI TPTRELA QVTDHLK++ + +
Sbjct: 230 VEKLISNFSQKNK------------KPI----SLIFTPTRELAHQVTDHLKKICEPVLAK 273
Query: 291 -NVRVVPIVGGMSTEKQERLLKARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
++ + GG+S +KQ+RLLK ++V+ TPGR EL+ + ++ +LD
Sbjct: 274 SQYSILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVNTLILD 333
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADR++++GHF E + II L + N SE + K QTL+FSAT
Sbjct: 334 EADRLLQDGHFDEFEKIIKHLLVERRKNRENSEGSS----------KIWQTLIFSAT--F 381
Query: 408 SADFRKKLKHG----SLKLKQSVNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEE 462
S D KL + K + + LN+ I+ L + + I+D S ++++++E
Sbjct: 382 SIDLFDKLSSSRQVKDRRFKNNEDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKE 441
Query: 463 SFIE 466
S IE
Sbjct: 442 SLIE 445
>gi|403298098|ref|XP_003939872.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Saimiri boliviensis
boliviensis]
Length = 860
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y P+ L L++TPTRELALQV H+ VA+ ++
Sbjct: 363 DKEQTGNLKQELDDKSATCKAY-PERPLLGLVLTPTRELALQVKQHIDAVARFTGIKTAI 421
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 422 LVGGMSTQKQQRMLNRYPEIVIATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 481
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 482 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 522
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT A L E+ I
Sbjct: 523 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATAETLTETKI 569
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 192 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 250
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 251 IPMIHAVLQ 259
>gi|169618601|ref|XP_001802714.1| hypothetical protein SNOG_12492 [Phaeosphaeria nodorum SN15]
gi|118574276|sp|Q0U6X2.1|MAK5_PHANO RecName: Full=ATP-dependent RNA helicase MAK5
gi|111059185|gb|EAT80305.1| hypothetical protein SNOG_12492 [Phaeosphaeria nodorum SN15]
Length = 817
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/365 (32%), Positives = 184/365 (50%), Gaps = 37/365 (10%)
Query: 113 DGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKT-----VEESVTVSNGPDDAEEELVSEAE 167
DG+G + ++ N + + +KK+ KK K E T G D + +
Sbjct: 184 DGDGEAEPKKMNKRERAAEKKRIAALAKKTKKPDDDEASEGKTFGPGAFDILANRADDED 243
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
+ AW EL L +++S+ +L F +PT IQ + IP D+IG A TGSGKTL
Sbjct: 244 DEVDVSAWEELELSTKILESLAKLKFSKPTTIQASTIPEI--MAGRDVIGKASTGSGKTL 301
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV- 286
AFG+PI++ L + K+ ++ + P ALII PTRELA Q+T HL +
Sbjct: 302 AFGIPIIESYLASKSKS--------KDVKDKTP----LALIIAPTRELAHQITAHLTALC 349
Query: 287 AKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
AKG + + GG++ +KQ R L+ + +++VGTPGRLWE++S G L ++ + F
Sbjct: 350 AKGAFEAPLIASVTGGLAVQKQRRQLE-KADIIVGTPGRLWEVISTGHGLLEKVKQIRFL 408
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
V+DEADR++ G+++EL I+ +L + + +RQTLVFSAT
Sbjct: 409 VVDEADRLLSQGNYKELGEILKILE--------KDAPAEGEAEAEETTEVERQTLVFSAT 460
Query: 405 I--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLE 461
L K K GS L ++ S+E L ++ R +D S +A+KL+
Sbjct: 461 FQKGLQQKLAGKAKGGSDNL---MSKQQSMEYLLKKINFREEKPKFIDANPSSQMASKLK 517
Query: 462 ESFIE 466
E IE
Sbjct: 518 EGLIE 522
>gi|358065451|ref|ZP_09151993.1| hypothetical protein HMPREF9473_04056 [Clostridium hathewayi
WAL-18680]
gi|356696343|gb|EHI57960.1| hypothetical protein HMPREF9473_04056 [Clostridium hathewayi
WAL-18680]
Length = 534
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 131/231 (56%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L PLL+K++ + G+ +P+PIQ+ IP K D++G A+TG+GKT AF LPI+
Sbjct: 3 FKELNLSPLLLKALEKKGYSQPSPIQEQAIPYVLE--KRDLLGCAQTGTGKTAAFALPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L+E K + K +RALI+TPTRELALQ+ D++KE + V+
Sbjct: 61 QNLMECPRKRQQ--------------KKPIRALILTPTRELALQIADNIKEYGEYTPVKG 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S Q + L+ +++V TPGRL +L+ E ++L + FVLDEADRM++
Sbjct: 107 TVIFGGVSAVPQIQDLRKGVDILVATPGRLNDLIGQRE---IDLSYVEIFVLDEADRMLD 163
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ +I +LP KKRQTL+FSAT+
Sbjct: 164 MGFIHDVKKVIALLP------------------------KKRQTLLFSATM 190
>gi|34328253|ref|NP_065240.2| ATP-dependent RNA helicase DDX24 isoform 2 [Mus musculus]
gi|341940454|sp|Q9ESV0.2|DDX24_MOUSE RecName: Full=ATP-dependent RNA helicase DDX24; AltName: Full=DEAD
box protein 24
gi|32967660|gb|AAH55048.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Mus musculus]
gi|33244019|gb|AAH55317.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Mus musculus]
gi|148686888|gb|EDL18835.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_b [Mus
musculus]
Length = 857
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 242 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 364 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 423
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 483
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 484 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 523
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 524 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 554
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 191 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 249
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 250 IPMIHSVLQ 258
>gi|349576517|dbj|GAA21688.1| K7_Mak5p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 773
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 158/304 (51%), Gaps = 42/304 (13%)
Query: 175 WNELR-LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
W L L +++S+ L F PT IQK IP QG VD++G A TGSGKTLA+G+PI
Sbjct: 172 WTNLAPLSMTILQSLQNLNFLRPTEIQKKSIPVIM-QG-VDVMGKASTGSGKTLAYGIPI 229
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI--- 290
+++L+ + K P +LI TPTRELA QVTDHLK++ + +
Sbjct: 230 VEKLISNFSQKNK------------KPI----SLIFTPTRELAHQVTDHLKKICEPVLAK 273
Query: 291 -NVRVVPIVGGMSTEKQERLLKARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
++ + GG+S +KQ+RLLK ++V+ TPGR EL+ + + +LD
Sbjct: 274 SQYSILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILD 333
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADR++++GHF E + II L + N SE + K QTL+FSAT
Sbjct: 334 EADRLLQDGHFDEFEKIIKHLLVERRKNRENSEGSS----------KIWQTLIFSAT--F 381
Query: 408 SADFRKKLKHG----SLKLKQSVNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEE 462
S D KL + K + + LN+ I+ L + + I+D S ++++++E
Sbjct: 382 SIDLFDKLSSSRQVKDRRFKNNEDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKE 441
Query: 463 SFIE 466
S IE
Sbjct: 442 SLIE 445
>gi|9931363|gb|AAG02170.1|AF214732_1 ATP-dependent RNA helicase [Mus musculus]
Length = 857
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 242 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 364 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 423
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 483
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 484 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 523
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 524 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 554
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 191 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 249
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 250 IPMIHSVLQ 258
>gi|226958385|ref|NP_001152974.1| ATP-dependent RNA helicase DDX24 isoform 1 [Mus musculus]
Length = 903
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 242 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 410 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 469
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 470 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 529
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 530 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 569
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 570 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 600
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 237 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 295
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 296 IPMIHSVLQ 304
>gi|168010159|ref|XP_001757772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691048|gb|EDQ77412.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 753
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 131/233 (56%), Gaps = 49/233 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L L+++ LG++EPTPIQ ACIP A G+ DI G+A TGSGKT AF LP++
Sbjct: 130 FGELNLSRPLIRACETLGYREPTPIQAACIPLAL-TGR-DICGSAVTGSGKTGAFALPML 187
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKEVAKGINV 292
+RLL Y P+ +R LI+TPTRELA+QV ++++A+ +V
Sbjct: 188 ERLL-------------------YRPRRIPAIRCLILTPTRELAVQVHSMVQKLAQFTDV 228
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
+VGG+S++ QE L+ARP++VV TPGR+ + + V L LS VLDEADR+
Sbjct: 229 TSAIVVGGLSSKVQEVALRARPDIVVATPGRMLDHLQNSLS--VGLEDLSILVLDEADRL 286
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+E G +E+ ++ P K+RQT++FSAT+
Sbjct: 287 LELGFTQEVHELVRQCP------------------------KRRQTMLFSATM 315
>gi|74141078|dbj|BAE22104.1| unnamed protein product [Mus musculus]
Length = 622
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 242 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 364 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 423
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 483
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 484 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 523
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 524 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 554
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 191 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 249
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 250 IPMIHSVLQ 258
>gi|148686887|gb|EDL18834.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_a [Mus
musculus]
Length = 943
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 242 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 450 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 509
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 510 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 569
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 570 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 609
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 610 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 640
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 277 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 335
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 336 IPMIHSVLQ 344
>gi|255538978|ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223551255|gb|EEF52741.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 783
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 142/262 (54%), Gaps = 49/262 (18%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
EE V++ D+ + S S +++ E+ L L+++ LG+ +PTPIQ ACIP
Sbjct: 120 EEDEDVAHNADETKSFFASAEGASFHANSFMEINLSRPLLRACEVLGYTKPTPIQAACIP 179
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GH 263
A G+ DI G+A TGSGKT AF LP ++RLL + PK
Sbjct: 180 LAL-TGR-DICGSAITGSGKTAAFALPTLERLL-------------------FRPKRVQA 218
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
+R LI+TPTRELA+QV ++++A+ ++R IVGG+ST+ QE L++ P++VV TPGR
Sbjct: 219 IRVLILTPTRELAVQVHSMVEKLAQFTDIRCCLIVGGLSTKVQESALRSMPDIVVATPGR 278
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
+ + + V+L L+ +LDEADR++E G E+ ++ + P
Sbjct: 279 MIDHLRNTMS--VDLDDLAVLILDEADRLLELGFSAEIHELVRLCP-------------- 322
Query: 384 TCVTVSSLQRKKRQTLVFSATI 405
K+RQT++FSAT+
Sbjct: 323 ----------KRRQTMLFSATM 334
>gi|74147720|dbj|BAE38731.1| unnamed protein product [Mus musculus]
Length = 792
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 242 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 365 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 424
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 425 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 484
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 485 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 524
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 525 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 555
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ A A A + K+DI+GAAETGSGKTLAF
Sbjct: 191 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQ-ALTLAPAIRDKLDILGAAETGSGKTLAFA 249
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 250 IPMIHSVLQ 258
>gi|50418781|ref|XP_457911.1| DEHA2C05170p [Debaryomyces hansenii CBS767]
gi|74659437|sp|Q6BV58.1|MAK5_DEBHA RecName: Full=ATP-dependent RNA helicase MAK5
gi|49653577|emb|CAG85962.1| DEHA2C05170p [Debaryomyces hansenii CBS767]
Length = 790
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 128/235 (54%), Gaps = 28/235 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W++L L + + L +++PT IQK IP A +GK D+IG A TGSGKTLA+G+PI+
Sbjct: 201 WDDLSLSSFTLNGLSALEYEKPTAIQKRTIPLAI-EGK-DVIGKAITGSGKTLAYGIPIL 258
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR- 293
+R L++ KA + + P G +I PTRELA QV DHL +AK +
Sbjct: 259 ERHLQKMAKANQ------SKKVINPPTG----IIFAPTRELAHQVVDHLNRIAKFTPLSQ 308
Query: 294 --VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+V I GG+S +KQERLL P +VV TPGR EL+ + L VLDEADR
Sbjct: 309 HGIVSITGGLSIQKQERLLSHGPGIVVATPGRFLELLQKDMALVQRLSCTDIVVLDEADR 368
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
++++GHF E I+++ + + E K QTLVFSAT +
Sbjct: 369 LLQDGHFDEFVKILELFGKHRPRDNKELEW-------------KWQTLVFSATFS 410
>gi|291413819|ref|XP_002723168.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Oryctolagus
cuniculus]
Length = 848
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 117/216 (54%), Gaps = 21/216 (9%)
Query: 250 EKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERL 309
E G A + P L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+R+
Sbjct: 364 EGGAAAWEAPPARPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRM 423
Query: 310 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
L PE+V+ TPGRLWEL+ HL L L VLDEADRM+E GHF EL +++ML
Sbjct: 424 LNRHPEIVIATPGRLWELIKERHSHLSNLRQLRCLVLDEADRMVEKGHFAELSQLLEML- 482
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGL 429
N+ Q +RQTLVFSAT+ L +L H K + ++
Sbjct: 483 -----NDSQYN-------------PQRQTLVFSATLTLVHQLPARLLHK--KHTKKMDKT 522
Query: 430 NSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
++ L ++ GMR ++DLT L E+ I
Sbjct: 523 AKLDLLVQKVGMRGKPKVIDLTRNEATVETLTETKI 558
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 186 DVSAWKDLFVPTPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 244
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 245 IPMIHAVLQ 253
>gi|224083077|ref|XP_002306942.1| predicted protein [Populus trichocarpa]
gi|222856391|gb|EEE93938.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 49/245 (20%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
+++ EL L L+++ LG+ +PTPIQ ACIP A G+ DI G+A TGSGKT AF LP
Sbjct: 136 NSFMELNLSRPLLRACEALGYTKPTPIQAACIPLAL-TGR-DICGSAITGSGKTAAFALP 193
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKEVAKGI 290
++RLL + PK L R LI+TPTRELA+QV ++++A+
Sbjct: 194 TLERLL-------------------FRPKRILAIRVLILTPTRELAVQVHSMIEKIAQFT 234
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
++R +VGG+ST+ QE L++ P++VV TPGR+ + + V+L L+ +LDEAD
Sbjct: 235 DIRCCLVVGGLSTKVQEASLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLILDEAD 292
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
R++E G E+ ++ + P K+RQT++FSAT+ D
Sbjct: 293 RLLELGFNAEIHELVRLCP------------------------KRRQTMLFSATMTEEVD 328
Query: 411 FRKKL 415
KL
Sbjct: 329 MLIKL 333
>gi|143454043|sp|Q0INC5.2|RH28_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|77555691|gb|ABA98487.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|125579336|gb|EAZ20482.1| hypothetical protein OsJ_36091 [Oryza sativa Japonica Group]
gi|215706455|dbj|BAG93311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 802
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 139/255 (54%), Gaps = 49/255 (19%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+G D + S S +++ EL L L+++ LG+++PTPIQ ACIP A G+
Sbjct: 174 SGVVDPSKFFASSEGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLAL-TGR 232
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIIT 270
DI G+A TGSGKT AF LP+++RLL + PK +R LI+T
Sbjct: 233 -DICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILT 272
Query: 271 PTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 330
PTRELA QV ++++A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + +
Sbjct: 273 PTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRN 332
Query: 331 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS 390
V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 333 SLS--VGLEDLAILILDEADRLLELGFSAEIQELIRMCP--------------------- 369
Query: 391 LQRKKRQTLVFSATI 405
++RQT++FSAT+
Sbjct: 370 ---RRRQTMLFSATM 381
>gi|401841362|gb|EJT43764.1| MAK5-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 435
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 213/445 (47%), Gaps = 80/445 (17%)
Query: 61 GGFLSLEEIDEASYNLQ------IPKPEK--GKPGKKTNTKKRKRSSANEEDPGDG---- 108
GGF LEEID + IPK + + K +K +++ + E PG G
Sbjct: 23 GGFYGLEEIDGVDVKIVNGKVNFIPKNDSKLARDVTKEKSKNKEKRAGAEASPGSGLESE 82
Query: 109 -----DGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELV 163
+ D+ G +L ++ G++ + K G + +G +D +E+++
Sbjct: 83 LLEFKNLDDVEEGELSAASYSLSDE-GEQDENKDTG-----------LLDGNEDEDEDVL 130
Query: 164 SE---------AEIS-TEFDAWNELR-LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
E +IS + W L L +++S+ L F PT IQK IPA +GK
Sbjct: 131 KENVFNQNINIDDISPVDLPEWTNLSSLSMTILQSLQNLNFLRPTEIQKKSIPAIL-EGK 189
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
D++G A TGSGKTLA+G+PI+++L+ + K P +LI TPT
Sbjct: 190 -DVLGKASTGSGKTLAYGIPIVEQLITNFSQKNK------------KP----ISLIFTPT 232
Query: 273 RELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLKARP--ELVVGTPGRLWE 326
RELA QVTDHL+++ + + ++ + GG+S +KQ+RLLK ++V+ TPGR E
Sbjct: 233 RELAHQVTDHLRKICEPVLAKSQYSILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLE 292
Query: 327 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 386
L+ + + ++ +LDEADR++++GHF E + II L + E+ + V
Sbjct: 293 LLEKDNELIKRFSQVNTLILDEADRLLQDGHFDEFEKIIKYLSV---------ERRKNKV 343
Query: 387 TVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQSVNGLNS-IETLSERAGM 441
S K QTLVFSAT S D KL K K + + LN+ IE L +
Sbjct: 344 KDSENDNKIWQTLVFSAT--FSIDLFDKLSSSHQAKDRKFKNNEDELNAVIEHLMNKIQF 401
Query: 442 RANVAIVDLTNVSVLANKLEESFIE 466
+ I+ S + + ++ES IE
Sbjct: 402 NSKPVIIHTNPGSKVGSHIKESLIE 426
>gi|239624536|ref|ZP_04667567.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47_FAA]
gi|239520922|gb|EEQ60788.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47FAA]
Length = 518
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 146/253 (57%), Gaps = 52/253 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL+L PLL+K++ + G+ +P+PIQ+ IP + G+ D++G A+TG+GKT AF LPI+
Sbjct: 3 FDELQLSPLLLKALDQKGYIKPSPIQEQAIPYVLN-GQ-DLLGCAQTGTGKTAAFALPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L+E + K K +RALI+TPTRELALQ+ ++++E G +
Sbjct: 61 QNLMERPKNRQK--------------KKPVRALILTPTRELALQIHENIEEYGAGTPINS 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S + Q + L+ +++V TPGRL +L+ +H ++L + FVLDEADRM++
Sbjct: 107 AVIFGGVSAKPQIQSLRRGIDILVATPGRLLDLIG---QHEIDLSFVEIFVLDEADRMLD 163
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 409
G +++ +I +LP KKRQTL+FSAT+ AL+A
Sbjct: 164 MGFIHDVKRVITLLP------------------------KKRQTLLFSATMPDEIQALAA 199
Query: 410 DFRKKLKHGSLKL 422
KL H +K+
Sbjct: 200 ----KLLHNPVKV 208
>gi|115488568|ref|NP_001066771.1| Os12g0481100 [Oryza sativa Japonica Group]
gi|113649278|dbj|BAF29790.1| Os12g0481100, partial [Oryza sativa Japonica Group]
Length = 832
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 139/255 (54%), Gaps = 49/255 (19%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+G D + S S +++ EL L L+++ LG+++PTPIQ ACIP A G+
Sbjct: 204 SGVVDPSKFFASSEGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLAL-TGR 262
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIIT 270
DI G+A TGSGKT AF LP+++RLL + PK +R LI+T
Sbjct: 263 -DICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILT 302
Query: 271 PTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 330
PTRELA QV ++++A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + +
Sbjct: 303 PTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRN 362
Query: 331 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS 390
V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 363 SLS--VGLEDLAILILDEADRLLELGFSAEIQELIRMCP--------------------- 399
Query: 391 LQRKKRQTLVFSATI 405
++RQT++FSAT+
Sbjct: 400 ---RRRQTMLFSATM 411
>gi|302817632|ref|XP_002990491.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
gi|300141659|gb|EFJ08368.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
Length = 469
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 147/303 (48%), Gaps = 62/303 (20%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA---------WNELRLHPLLMKSIYRLGFKEPT 197
+ V + PDD EI E DA + EL + L+ + LG + PT
Sbjct: 21 DPVPAAERPDDGNAR---STEICKESDAPEGGGGGGSFEELGVAEWLVGACKELGMRHPT 77
Query: 198 PIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEK 257
P+Q+AC+P +GK D++G A+TGSGKT AF LPI+QRL E
Sbjct: 78 PVQRACVPQIL-KGK-DVLGMAQTGSGKTAAFALPILQRLGEN----------------- 118
Query: 258 YAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELV 317
P G + AL++TPTRELA Q++D K + G+++R +VGGM Q ++L RP +V
Sbjct: 119 --PYG-IFALVMTPTRELAFQISDQFKALGAGVHLRCAVVVGGMDMTTQAQILMERPHVV 175
Query: 318 VGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEG 377
+ TPGR+ + F VLDEAD +++ G ELQ+I D +
Sbjct: 176 IATPGRIKAHIGSDPDIAAAFSKTKFLVLDEADLLLDRGFQDELQTIFDGI--------- 226
Query: 378 QSEQTQTCVTVSSLQRKKRQTLVFSATIA--LSADFRKKLKHGSLKLKQSVNGLNSIETL 435
K+RQTL+FSAT+ L A R H + Q+ GL ++E+L
Sbjct: 227 ---------------SKQRQTLLFSATMTGDLQA-LRDLFGHRAF-FYQAYEGLKTVESL 269
Query: 436 SER 438
+R
Sbjct: 270 DQR 272
>gi|427785455|gb|JAA58179.1| Putative atp-dependent rna helicase ddx23 [Rhipicephalus
pulchellus]
Length = 788
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 141/232 (60%), Gaps = 17/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E L ++ I LG+K+PTPIQ+ IP DIIG AETGSGKTLAF LP++
Sbjct: 362 WSECNLPTAILDVIKELGYKDPTPIQRQAIPIGLQNR--DIIGVAETGSGKTLAFLLPLL 419
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K+ E+ E+A++ P A+I+ PTRELA Q+ + + AK +++R
Sbjct: 420 VWITS----LPKI--ERQEDADQ-GPY----AIIMAPTRELAQQIDEETTKFAKMLDIRS 468
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG+S E+Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 469 VAVIGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LSRCTYIVLDEADRMID 525
Query: 355 NGHFRELQSIIDMLPMTNGS-NEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G E+Q I+D +P+TN + +E + + + + K RQT++F+AT+
Sbjct: 526 MGFEGEVQKILDYMPVTNQKPDTDDAEDEEKLLANFASKHKYRQTVMFTATM 577
>gi|109084685|ref|XP_001097132.1| PREDICTED: ATP-dependent RNA helicase DDX24 isoform 5 [Macaca
mulatta]
Length = 856
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 125/229 (54%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+
Sbjct: 360 DKEQIGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGXXXXX 418
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 419 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 478
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 479 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 519
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 520 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 566
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + ++DI+GAAETGSGKTLAF
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTL-APAIRDRLDILGAAETGSGKTLAFA 246
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 247 IPVIHAVLQ 255
>gi|410962873|ref|XP_003987993.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Felis catus]
Length = 856
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 22/229 (9%)
Query: 238 LEEREKAGKMLEEKGEEAE-KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
L+E + G E G+ A K PK L L++TPTRELA+QV H+ VAK ++
Sbjct: 355 LDEEQTGGLKQELGGKTATCKAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAI 414
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 415 LVGGMSTQKQQRMLNRQPEIVIATPGRLWELIKEKHPHLSNLKQLRCLVVDEADRMVEKG 474
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML S KRQTL+FSAT+ L ++
Sbjct: 475 HFAELSQLLEML-------------------SDSQYNPKRQTLIFSATLTLVHQAPARIL 515
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 516 HK--KHTKKIDKTAKLDLLVQKIGMRGKPKVIDLTRNEATVETLTETKI 562
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
T+ P A+ + + + AW +L + +++++ LGF PTPIQ + A A
Sbjct: 167 TIPKVPKKAKTWVPETHDQKADVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-APAI 225
Query: 210 QGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK---------AGKMLEEKGEEA 255
+ K+DI+GAAETGSGKTLAF +P++ +L+ + K G + E G EA
Sbjct: 226 RDKLDILGAAETGSGKTLAFAIPMIHAVLQWQVKKKPTPTLGNPGALPSEAGTEA 280
>gi|344273652|ref|XP_003408633.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Loxodonta
africana]
Length = 858
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 118/218 (54%), Gaps = 22/218 (10%)
Query: 249 EEKGEEAE-KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQE 307
E GE A K P+ L L++TPTRELA+QV H+ VAK +R +VGGMST+KQE
Sbjct: 371 ESNGEIATCKEHPRHPLLGLVLTPTRELAVQVKQHIDAVAKFTGIRTAILVGGMSTQKQE 430
Query: 308 RLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
R+L +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 431 RMLNRQPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVVDEADRMVEKGHFDELSQLLEM 490
Query: 368 LPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVN 427
L S KRQTLVFSAT+ L ++ H K + ++
Sbjct: 491 L-------------------SDSQYNPKRQTLVFSATLTLVHQAPTRILHK--KHTKKMD 529
Query: 428 GLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
++ L ++ GMR ++DLT L E+ I
Sbjct: 530 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLIETKI 567
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 186 DVSAWKNLFVPEGVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 244
Query: 231 LPIMQRLLEEREK 243
+P++ +L+ ++K
Sbjct: 245 IPMIHAVLQWQKK 257
>gi|297298507|ref|XP_002805221.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Macaca mulatta]
Length = 770
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 125/229 (54%), Gaps = 25/229 (10%)
Query: 240 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+
Sbjct: 274 DKEQIGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGXXXXX 332
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 333 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 392
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 416
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 393 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 433
Query: 417 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 434 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 480
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
A A + ++DI+GAAETGSGKTLAF +P++ +L+
Sbjct: 136 APAIRDRLDILGAAETGSGKTLAFAIPVIHAVLQ 169
>gi|340514381|gb|EGR44644.1| predicted protein [Trichoderma reesei QM6a]
Length = 734
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 154/296 (52%), Gaps = 31/296 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W EL L ++ +I +LGF +PT IQ+ IP D+IG A+TGSGKTLAFG+PI+
Sbjct: 172 WVELNLSTRVVSAIAKLGFSKPTLIQQKTIPEIL--AGEDVIGKAQTGSGKTLAFGIPIV 229
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV-- 292
++ LE L A++ P A++++PTRELA Q++DH+K + G+
Sbjct: 230 EKWLE--------LYVDKANAKREGPT----AVVLSPTRELAKQLSDHIKALCDGLPTAP 277
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
V + GG+S +KQ+R L+ + ++V+ TPGRLWE++ G + F V+DEADR+
Sbjct: 278 YVCTVTGGLSIQKQQRQLE-KADIVIATPGRLWEVLDGDMSLQDSFTKIKFLVVDEADRL 336
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 412
+ G F+E + II L + RQTLVFSAT + +
Sbjct: 337 FKAGQFKEAEDIIGAL---------DRRDPEADEDDEGDDLPPRQTLVFSAT--FDKNLQ 385
Query: 413 KKLKHGSLKLKQSVNGLN--SIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
KL G K ++ G + +E L + R +D+ VS +A L+E IE
Sbjct: 386 SKLA-GRGKGPKAAAGSDEEKMEYLMKCLKFRGEPKYIDVNPVSQMAEGLKEGLIE 440
>gi|309792104|ref|ZP_07686577.1| DEAD/DEAH box helicase domain protein [Oscillochloris trichoides
DG-6]
gi|308225848|gb|EFO79603.1| DEAD/DEAH box helicase domain protein [Oscillochloris trichoides
DG6]
Length = 422
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 124/231 (53%), Gaps = 48/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + LHP LM+++ GF +PTPIQ IP A G+ ++IG A+TG+GKT AF LPI+
Sbjct: 3 FADFALHPALMQNVSAQGFTQPTPIQAQTIPLAL-SGQ-NLIGLAQTGTGKTAAFVLPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRLL+ R++ + ALI+TPTRELA Q+ D ++ +A G +R
Sbjct: 61 QRLLQNRQRGTQ-------------------ALIVTPTRELAEQINDTIRVLAHGTGLRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
PI GG+ E QER L+A E+VV PGRL + + G L + VLDEADRM++
Sbjct: 102 APIYGGVGMEPQERALRAGVEIVVACPGRLIDHLGRGS---ARLDGVQMLVLDEADRMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +Q I+ LP +RQT++FSAT+
Sbjct: 159 MGFLPAIQRILSALP------------------------TRRQTMLFSATL 185
>gi|432096748|gb|ELK27327.1| ATP-dependent RNA helicase DDX24 [Myotis davidii]
Length = 790
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 21/209 (10%)
Query: 257 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 316
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+
Sbjct: 367 KSHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLHRQPEI 426
Query: 317 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 376
V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 427 VIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML-------- 478
Query: 377 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 436
S KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 479 -----------SDSQYNPKRQTLVFSATLTLVHQAPARVLHK--KHTKKIDKTAKLDILM 525
Query: 437 ERAGMRANVAIVDLTNVSVLANKLEESFI 465
++ GMR ++DLT L E+ I
Sbjct: 526 QKIGMRGKPKVIDLTRNEATVETLTETKI 554
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 189 DVSAWKDLFVPRPVLRALSALGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 247
Query: 231 LPIMQRLLEEREK 243
+P++ +L+ + K
Sbjct: 248 IPMIHSVLQWQVK 260
>gi|315641802|ref|ZP_07896806.1| ATP-dependent RNA helicase DeaD [Enterococcus italicus DSM 15952]
gi|315482477|gb|EFU73016.1| ATP-dependent RNA helicase DeaD [Enterococcus italicus DSM 15952]
Length = 522
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 137/260 (52%), Gaps = 54/260 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+K++ R GF+E TPIQ IP A G+ D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKAVERSGFEEATPIQSETIPLAL-SGR-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ HL+ L+I+PTRELA+Q + L + K VRV
Sbjct: 61 EKI--------------------DTSSSHLQGLVISPTRELAIQTQEELYRLGKDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 MAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHIN---RHTLKLETVETLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 409
G +++SII +P T RQTL+FSAT+ ++
Sbjct: 158 MGFLEDIESIISKVPST------------------------RQTLLFSATMPPAIKSIGV 193
Query: 410 DFRKKLKHGSLKLKQSVNGL 429
F + +H +K K+ L
Sbjct: 194 KFMQNPEHVKIKAKEMTADL 213
>gi|323356090|gb|EGA87895.1| Mak5p [Saccharomyces cerevisiae VL3]
Length = 526
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 155/294 (52%), Gaps = 41/294 (13%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
+++S+ L F PT IQK IP QG VD++G A TGSGKTLA+G+PI+++L+ +
Sbjct: 3 ILQSLQNLNFLRPTEIQKKSIPVIM-QG-VDVMGKASTGSGKTLAYGIPIVEKLISNFSQ 60
Query: 244 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVG 299
K P +LI TPTRELA QVTDHLK++ + + ++ + G
Sbjct: 61 KNK------------KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTG 104
Query: 300 GMSTEKQERLLKA--RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
G+S +KQ+RLLK ++V+ TPGR EL+ + + +LDEADR++++GH
Sbjct: 105 GLSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGH 164
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 417
F E + II L + N SE + K QTL+FSAT S D KL
Sbjct: 165 FDEFEKIIKHLLVERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSS 212
Query: 418 G----SLKLKQSVNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ K + + LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 213 SRQVKDRRFKNNEDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 266
>gi|223590136|sp|A5DF03.2|PRP28_PICGU RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|190345810|gb|EDK37756.2| hypothetical protein PGUG_01854 [Meyerozyma guilliermondii ATCC
6260]
Length = 575
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 133/239 (55%), Gaps = 19/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W E + L+ +I +LG+KEPTPIQ+A IP A G D++G AETGSGKTL
Sbjct: 145 IPNPLRSWKESGIPTTLLNTIDQLGYKEPTPIQRAAIPTAL--GHRDVVGIAETGSGKTL 202
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ L +K +E K E + + L++ PTRELALQ++ K+ A
Sbjct: 203 AFLIPLLS-YLSAIDKDYMEVEHKQE-----SNLNKVLGLVLAPTRELALQISKEAKKFA 256
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ VV I+GG E+ + ++ +VV TPGR L+ EK L++L +D
Sbjct: 257 SVLGYNVVTIIGGHQYEETVKSVQDGAHIVVATPGR---LIDSAEKGLIDLSQCYHLTMD 313
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
EADRMI+ G + LQSI+ LP T+ S G + + + K R TL+F+ATI+
Sbjct: 314 EADRMIDMGFEKALQSILSFLPSTSSSGFG--------LDSTIFKVKSRITLMFTATIS 364
>gi|426248528|ref|XP_004018015.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Ovis aries]
Length = 852
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 122/225 (54%), Gaps = 25/225 (11%)
Query: 242 EKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGM 301
E+ GK+ ++G P+ L L++TPTRELA+QV H+ VAK ++ +VGGM
Sbjct: 360 EQTGKV--KRGLGGSAVPPRRPLLGLVLTPTRELAVQVKQHVDAVAKFTGIKTAILVGGM 417
Query: 302 STEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 361
ST+KQ+R+L +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL
Sbjct: 418 STQKQQRMLNRQPEIVIATPGRLWELVKEKHPHLSNLQQLRCLVIDEADRMVEKGHFAEL 477
Query: 362 QSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK-KRQTLVFSATIALSADFRKKLKHGSL 420
+++ML S Q KRQTLVFSAT+ L ++ H
Sbjct: 478 SQLLEML--------------------SDCQYNPKRQTLVFSATLTLVHQAPARILHK-- 515
Query: 421 KLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 516 KHAKKIDKTAKLDLLMQKIGMRGKPKVIDLTRKEATVETLTETKI 560
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 247
Query: 231 LPIMQRLL 238
+P++ +L
Sbjct: 248 IPMIDAVL 255
>gi|348553728|ref|XP_003462678.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Cavia porcellus]
Length = 841
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 21/192 (10%)
Query: 260 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 319
PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L PE+V+
Sbjct: 368 PKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRHPEIVIA 427
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQS 379
TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML N+ Q
Sbjct: 428 TPGRLWELVKEKHSHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML------NDSQY 481
Query: 380 EQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERA 439
KRQTLVFSAT+ L +L H K + ++ ++ L ++
Sbjct: 482 N-------------PKRQTLVFSATLTLVHQVPARLLHK--KHVKKIDKTAKLDLLMQKI 526
Query: 440 GMRANVAIVDLT 451
GMR ++DLT
Sbjct: 527 GMRGKPKVIDLT 538
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A + ++DI+GAAETGSGKTLAF
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-VPAIRDRLDILGAAETGSGKTLAFA 247
Query: 231 LPIMQRLLEEREK 243
+P++ +L+ +++
Sbjct: 248 IPMIHAVLQWQKR 260
>gi|146420455|ref|XP_001486183.1| hypothetical protein PGUG_01854 [Meyerozyma guilliermondii ATCC
6260]
Length = 575
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 133/239 (55%), Gaps = 19/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W E + L+ +I +LG+KEPTPIQ+A IP A G D++G AETGSGKTL
Sbjct: 145 IPNPLRSWKESGIPTTLLNTIDQLGYKEPTPIQRAAIPTAL--GHRDVVGIAETGSGKTL 202
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ L +K +E K E + + L++ PTRELALQ++ K+ A
Sbjct: 203 AFLIPLLS-YLSAIDKDYMEVEHKQE-----SNLNKVLGLVLAPTRELALQISKEAKKFA 256
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ VV I+GG E+ + ++ +VV TPGR L+ EK L++L +D
Sbjct: 257 SVLGYNVVTIIGGHQYEETVKSVQDGAHIVVATPGR---LIDSAEKGLIDLSQCYHLTMD 313
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
EADRMI+ G + LQSI+ LP T+ S G + + + K R TL+F+ATI+
Sbjct: 314 EADRMIDMGFEKALQSILSFLPSTSSSGFG--------LDSTIFKVKSRITLMFTATIS 364
>gi|156848503|ref|XP_001647133.1| hypothetical protein Kpol_1036p17 [Vanderwaltozyma polyspora DSM
70294]
gi|160409987|sp|A7TEG8.1|MAK5_VANPO RecName: Full=ATP-dependent RNA helicase MAK5
gi|156117817|gb|EDO19275.1| hypothetical protein Kpol_1036p17 [Vanderwaltozyma polyspora DSM
70294]
Length = 763
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 161/294 (54%), Gaps = 52/294 (17%)
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 244
+ + +LGF +PT IQ+ IP A +G+ DI+G A TGSGKTLA+G+PI+++L++ +
Sbjct: 204 LHGLTKLGFNKPTLIQEEAIPMAL-KGE-DIMGKASTGSGKTLAYGIPIIEKLMKSKSNT 261
Query: 245 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR----VVPIVGG 300
AP G LI TPTRELA QVTDHL+++A I + ++ + GG
Sbjct: 262 --------------APIG----LIFTPTRELAKQVTDHLRKIASLIVDKSPHAILSLTGG 303
Query: 301 MSTEKQERLLK--ARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFFVLDEADRMIENGH 357
+S +KQERLLK +VV TPGR EL+ +K LVE +S VLDEADR++++GH
Sbjct: 304 LSIQKQERLLKYEGSGRIVVATPGRFLELIEK-DKTLVERFSQISTLVLDEADRLLQDGH 362
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 417
F E ++I+ L G+ + ++ QT++FSAT A D KL H
Sbjct: 363 FDEFENILKYL--------GRESKN---------RKHNWQTMIFSATFA--TDLFDKLSH 403
Query: 418 GSLK-LKQSVNGLNSIET----LSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
S K +K N +E L + ++ ++D ++++++ES IE
Sbjct: 404 ASWKNMKTPSKNENEMEIVLKHLMTKIHFKSKPILIDANPEDKVSSQIKESLIE 457
>gi|74178110|dbj|BAE29843.1| unnamed protein product [Mus musculus]
gi|74220253|dbj|BAE31305.1| unnamed protein product [Mus musculus]
gi|74225346|dbj|BAE31603.1| unnamed protein product [Mus musculus]
Length = 857
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 120/212 (56%), Gaps = 23/212 (10%)
Query: 242 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 364 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 423
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+D ADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDGADRMVEKGHFA 483
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 484 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 523
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 524 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 554
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 191 DVSAWRDLFVPEAVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 249
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 250 IPMIHSVLQ 258
>gi|345803790|ref|XP_537542.3| PREDICTED: ATP-dependent RNA helicase DDX24 [Canis lupus
familiaris]
Length = 852
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 115/209 (55%), Gaps = 21/209 (10%)
Query: 257 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 316
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+
Sbjct: 374 KVHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRQPEI 433
Query: 317 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 376
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 434 VVATPGRLWELIKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 485
Query: 377 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 436
G S+ KRQTL+FSAT+ L ++ H K + ++ ++
Sbjct: 486 GDSQYN-----------PKRQTLIFSATLTLVHQAPARILHK--KHTKKIDKTAKLDLFV 532
Query: 437 ERAGMRANVAIVDLTNVSVLANKLEESFI 465
++ GMR ++DLT L E+ I
Sbjct: 533 QKIGMRGKPKVIDLTRNEATVETLTETKI 561
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 188 DVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 246
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 247 IPMIHTVLQ 255
>gi|149737471|ref|XP_001498017.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Equus caballus]
Length = 857
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 21/209 (10%)
Query: 257 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 316
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+
Sbjct: 380 KAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRQPEI 439
Query: 317 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 376
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 440 VVATPGRLWELVKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 491
Query: 377 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 436
S KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 492 -----------SDSQYNPKRQTLVFSATLTLVHQAPARILHK--KHTKKIDKTAKLDLLM 538
Query: 437 ERAGMRANVAIVDLTNVSVLANKLEESFI 465
++ G+R ++DLT L E+ I
Sbjct: 539 QKIGLRGKPKVIDLTRNEATVETLTETKI 567
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
T GP A+ + + + AW +L + +++++ LGF PTPIQ A A A
Sbjct: 167 TTPKGPKKAKTWMPEMRDQKADVSAWKDLFVPKPVLRALSFLGFSAPTPIQ-ALTLAPAI 225
Query: 210 QGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
+ K+DI+GAAETGSGKTLAF +P++ +L+
Sbjct: 226 RDKLDILGAAETGSGKTLAFAIPMIHAVLQ 255
>gi|302792278|ref|XP_002977905.1| hypothetical protein SELMODRAFT_107914 [Selaginella moellendorffii]
gi|300154608|gb|EFJ21243.1| hypothetical protein SELMODRAFT_107914 [Selaginella moellendorffii]
Length = 741
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 164/309 (53%), Gaps = 63/309 (20%)
Query: 101 NEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEE 160
N ED D DG+E+ + Q E+++ + +K++ ++ K++ D+++
Sbjct: 53 NAEDV-DQDGEEENHDEQGEKDRGQDSTDEDEKEQLDHSQRKKSL-----------DSKK 100
Query: 161 ELVSEAEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGA 218
E + F+A + EL + L+++ LG+++PTPIQ ACIP A G+ DI G+
Sbjct: 101 EKFFSSNHGASFNASSFIELNVSRPLLRACDALGYRQPTPIQAACIPLAL-AGR-DICGS 158
Query: 219 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELA 276
A TGSGKT AF LPI++RLL + P+ +R LIITPTRELA
Sbjct: 159 AVTGSGKTAAFALPILERLL-------------------FRPRRIPAIRVLIITPTRELA 199
Query: 277 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 336
+Q+ ++++A+ ++R +VGG+S++ QE L+ P++VV TPGR+ + + + V
Sbjct: 200 VQLHSMIEKLAQFTDIRCCLVVGGLSSKVQEVALRTHPDIVVATPGRMIDHLRNTQS--V 257
Query: 337 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 396
L L+ VLDEADR++E G E+ ++ + P +R
Sbjct: 258 GLEELAILVLDEADRLLELGFREEIHELVKLCP------------------------SRR 293
Query: 397 QTLVFSATI 405
QT++FSAT+
Sbjct: 294 QTMLFSATM 302
>gi|313892323|ref|ZP_07825915.1| DEAD-box ATP-dependent RNA helicase CshA [Dialister microaerophilus
UPII 345-E]
gi|313119182|gb|EFR42382.1| DEAD-box ATP-dependent RNA helicase CshA [Dialister microaerophilus
UPII 345-E]
Length = 491
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 132/234 (56%), Gaps = 49/234 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
++ + EL L +MK++ +GF+EP+PIQK IP A QGK D+IG A+TG+GKT AFG+
Sbjct: 2 YETFKELGLSEEIMKAVADMGFEEPSPIQKEAIPIAM-QGK-DLIGQAQTGTGKTAAFGI 59
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
PI+QR+ + K P+ A++++PTRELA+Q + + +A+ +N
Sbjct: 60 PILQRI----------------DTSKPGPQ----AIVLSPTRELAIQSAEEINHLAQYMN 99
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
++ +PI GG E+Q R LK +P ++V TPGRL + M ++ ++L + VLDE D
Sbjct: 100 IKTIPIYGGQDIERQFRALKKKPNIIVATPGRLMDHM---KRKTIDLSNVQIAVLDEGDE 156
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G ++++I+ P K+RQTL FSAT+
Sbjct: 157 MVDMGFIDDIRTIMAATP------------------------KERQTLFFSATM 186
>gi|346466157|gb|AEO32923.1| hypothetical protein [Amblyomma maculatum]
Length = 487
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 126/232 (54%), Gaps = 50/232 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L+ ++ + LG K P+PIQ+ CIPA + GK D IG A+TGSGKTLAF LPI+
Sbjct: 32 FKDLKLNKWMIDQLDTLGIKNPSPIQENCIPAILN-GK-DCIGCAKTGSGKTLAFALPIL 89
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q+L E+ P G + ALI+TPTRELA Q+++ K V K +R
Sbjct: 90 QKLFED-------------------PYG-IFALILTPTRELAFQISEQFKVVGKAAGLRD 129
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
IVGGM Q ++L P +VV TPGRL + + L + F VLDEADR++E
Sbjct: 130 CVIVGGMDMVTQGQILAESPHVVVATPGRLADHLESCNTF--TLKRIRFLVLDEADRLLE 187
Query: 355 NGHFRE-LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
GHF E L++I LP KKRQTL+FSATI
Sbjct: 188 -GHFNEQLKTIFAALP------------------------KKRQTLLFSATI 214
>gi|195437654|ref|XP_002066755.1| GK24389 [Drosophila willistoni]
gi|194162840|gb|EDW77741.1| GK24389 [Drosophila willistoni]
Length = 808
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 145/239 (60%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +WNE P ++ I R+G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 375 IPNPIRSWNESGFPPEIIDIIDRVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 432
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 433 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFG 481
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 482 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 538
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + + + ++ + + +KK RQT++F+AT+
Sbjct: 539 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDESKLMENFYTKKKYRQTVMFTATM 597
>gi|301777516|ref|XP_002924172.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Ailuropoda
melanoleuca]
gi|281354104|gb|EFB29688.1| hypothetical protein PANDA_013454 [Ailuropoda melanoleuca]
Length = 853
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 120/223 (53%), Gaps = 23/223 (10%)
Query: 245 GKMLEEKGEEAE--KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMS 302
GK+ EE G + K PK L L++TPTRELA+QV H+ VAK ++ +VGGMS
Sbjct: 360 GKLKEELGGKIATCKAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMS 419
Query: 303 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 362
+KQ+R+L +PE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL
Sbjct: 420 AQKQQRMLNRQPEIVVATPGRLWELIKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELS 479
Query: 363 SIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKL 422
+++ML S KRQTL+FSAT+ L ++ H K
Sbjct: 480 QLLEML-------------------SDSQYNPKRQTLIFSATLTLVHQAPARILHK--KH 518
Query: 423 KQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
+ ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 519 VKKIDKTAKLDLLVQKIGMRGKPKVIDLTRNEATVESLTETKI 561
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 188 DVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 246
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 247 IPMIHAVLQ 255
>gi|296215803|ref|XP_002754286.1| PREDICTED: ATP-dependent RNA helicase DDX24 isoform 1 [Callithrix
jacchus]
Length = 856
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 119/218 (54%), Gaps = 22/218 (10%)
Query: 248 LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQE 307
L++K + Y PK L L++TPTRELALQV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 371 LDDKSATCKAY-PKRPLLGLVLTPTRELALQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 429
Query: 308 RLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 430 RMLNRYPEIVIATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 489
Query: 368 LPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVN 427
L N+ Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 490 L------NDSQYN-------------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 528
Query: 428 GLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 465
++ L + G+R ++DLT L E+ I
Sbjct: 529 KTAKLDLLMHKIGIRGKPKVIDLTRNEATVETLTETKI 566
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ A A A + K+DI+GAAETGSGKTLAF
Sbjct: 189 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQ-ALTLAPAIRDKLDILGAAETGSGKTLAFA 247
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 248 IPMIHAVLQ 256
>gi|342320500|gb|EGU12440.1| ATP-dependent RNA helicase MAK5 [Rhodotorula glutinis ATCC 204091]
Length = 871
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 184/372 (49%), Gaps = 59/372 (15%)
Query: 152 SNGPDDAEEELVSEA--EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQ--------- 200
SNG A EE E ++ E AW+ + L L +++ L F +PT IQ
Sbjct: 199 SNG--GAVEEAADEPPFDVEAELPAWSHIPLANPLYRALAELKFTKPTEIQEKALLVGED 256
Query: 201 ------------KACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKML 248
K+ A + D++G A+TGSGKTLA+GLPI+ +L + +
Sbjct: 257 AKAQAEGEEEQEKSAFDTAPAGREHDVVGIAQTGSGKTLAYGLPILSHILSQPSPSSSPS 316
Query: 249 EEKGEEAEKYAPKGHLRALIITPTRELALQV-----------------TDHLKEVA---- 287
+ + E P L ALI+ PTRELALQV + ++VA
Sbjct: 317 DSDSDADEPSLPSTRLAALILCPTRELALQVRTSLSSLSVRSLPLRTPSPETEKVAPEDP 376
Query: 288 ----KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 343
+G V+VV + GGMS EKQ+R L+ ++VV TPGRLW+L+ + + E+ + F
Sbjct: 377 RKRKQGRLVQVVALTGGMSVEKQKRQLERGADIVVATPGRLWDLIGESDMLVQEIKNIKF 436
Query: 344 FVLDEADRMIENGHFRELQSIIDMLPMTNGS-NEGQSEQTQTCVT----VSSLQ-RKKRQ 397
V+DEADRMIENGHF EL+SI+ + + ++G + + V V++L R +
Sbjct: 437 LVIDEADRMIENGHFAELESIVRLTRREQATPDDGFVDDFDSAVASRTNVTTLPCRPDMR 496
Query: 398 TLVFSATIALSADFRKKLKHGSLK-LKQSVNG-LNSIETLSERAGMR-ANVAIVDLTNVS 454
T VFSAT++ K K G K + ++V G + S++ L E R + I+DL+
Sbjct: 497 TFVFSATMSKELQLNLKRKGGPKKFVPKAVEGEMTSLDDLLELLDFRDPDPEIIDLSPEH 556
Query: 455 VLANKLEESFIE 466
L L+E +E
Sbjct: 557 GLVETLKECKVE 568
>gi|218186850|gb|EEC69277.1| hypothetical protein OsI_38328 [Oryza sativa Indica Group]
Length = 802
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 138/255 (54%), Gaps = 49/255 (19%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+G D + S S +++ EL L L+++ LG+++PTPIQ ACIP A G+
Sbjct: 174 SGVVDPSKFFASSEGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLAL-TGR 232
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIIT 270
DI G+A TGSGKT AF LP+++RLL + PK +R LI+T
Sbjct: 233 -DICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILT 272
Query: 271 PTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 330
PTRELA V ++++A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + +
Sbjct: 273 PTRELAAPVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRN 332
Query: 331 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS 390
V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 333 SLS--VGLEDLAILILDEADRLLELGFSAEIQELIRMCP--------------------- 369
Query: 391 LQRKKRQTLVFSATI 405
++RQT++FSAT+
Sbjct: 370 ---RRRQTMLFSATM 381
>gi|198425972|ref|XP_002127372.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
[Ciona intestinalis]
Length = 790
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 143/238 (60%), Gaps = 18/238 (7%)
Query: 175 WNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
W E L P +++ I+R+G+K+PTPIQ+ IP DIIG AETGSGKT AF +P+
Sbjct: 363 WKECGDLPPEIVEVIHRIGYKDPTPIQRQAIPIGFLNR--DIIGVAETGSGKTAAFLIPL 420
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + K+ E+ E+A+K P ALI+ PTRELA Q+ + + K + +R
Sbjct: 421 LAWITS----LPKI--ERLEDADK-GP----YALILAPTRELAQQIEEETIKFGKELGIR 469
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V ++GG+S E Q L+ E+V+ TPGRL +++ E + L ++ VLDEADRMI
Sbjct: 470 TVAVIGGLSREDQGFKLRMGCEIVIATPGRLIDVL---ENRYIVLSQCTYVVLDEADRMI 526
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIALSAD 410
+ G ++Q I+D +P+TN + +S + + + + L + K RQT++F+AT+ ++ +
Sbjct: 527 DMGFEPDVQKILDHMPVTNQKPDDESMEDKIIMKSNFLTKHKYRQTVMFTATMPVAVE 584
>gi|449516409|ref|XP_004165239.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
28-like [Cucumis sativus]
Length = 733
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 132/235 (56%), Gaps = 49/235 (20%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
+++ EL L L+++ LG+ +PTPIQ ACIP A G+ DI G+A TGSGKT AF LP
Sbjct: 135 NSFMELNLSRPLIRACEALGYAKPTPIQAACIPLAL-TGR-DICGSAITGSGKTAAFSLP 192
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGI 290
++RLL Y PK +R LI+TP RELA+QV ++++A+
Sbjct: 193 TLERLL-------------------YRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFT 233
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
++R IVGG+S ++QE L++ P++VV TPGR+ + + V+L L+ +LDEAD
Sbjct: 234 DIRCCLIVGGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMS--VDLDDLAVLILDEAD 291
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
R++E G E++ ++ + P K+RQT++FSAT+
Sbjct: 292 RLLELGFSAEIRELVRLCP------------------------KRRQTMLFSATM 322
>gi|449460106|ref|XP_004147787.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Cucumis
sativus]
Length = 733
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 132/235 (56%), Gaps = 49/235 (20%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
+++ EL L L+++ LG+ +PTPIQ ACIP A G+ DI G+A TGSGKT AF LP
Sbjct: 135 NSFMELNLSRPLIRACEALGYAKPTPIQAACIPLAL-TGR-DICGSAITGSGKTAAFSLP 192
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGI 290
++RLL Y PK +R LI+TP RELA+QV ++++A+
Sbjct: 193 TLERLL-------------------YRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFT 233
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
++R IVGG+S ++QE L++ P++VV TPGR+ + + V+L L+ +LDEAD
Sbjct: 234 DIRCCLIVGGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMS--VDLDDLAVLILDEAD 291
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
R++E G E++ ++ + P K+RQT++FSAT+
Sbjct: 292 RLLELGFSAEIRELVRLCP------------------------KRRQTMLFSATM 322
>gi|302804021|ref|XP_002983763.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
gi|300148600|gb|EFJ15259.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
Length = 418
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
EL + L+ + LG + PTP+Q+AC+P +GK D++G A+TGSGKT AF LPI+QR
Sbjct: 6 ELGVAEWLVGACKELGMRHPTPVQRACVPQIL-KGK-DVLGMAQTGSGKTAAFALPILQR 63
Query: 237 LLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
L GE P G + AL++TPTRELA Q++D K + G+++R
Sbjct: 64 L--------------GEN-----PYG-IFALVMTPTRELAFQISDQFKALGAGVHLRCAV 103
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
+VGGM Q ++L RP +V+ TPGR+ + F VLDEAD +++ G
Sbjct: 104 VVGGMDMTTQAQILTERPHVVIATPGRIKAHLGSDPDIAAAFSKTKFLVLDEADLLLDRG 163
Query: 357 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA--LSADFRKK 414
ELQ+I D + K+RQTL+FSAT+ L A R
Sbjct: 164 FQDELQTIFDGIS------------------------KQRQTLLFSATMTGDLQA-LRDL 198
Query: 415 LKHGSLKLKQSVNGLNSIETLSER 438
H + Q+ GL ++E+L +R
Sbjct: 199 FGHRAF-FYQAYEGLKTVESLDQR 221
>gi|225457931|ref|XP_002273443.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Vitis
vinifera]
Length = 732
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 49/240 (20%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
+++ EL L L+++ LG+ +PTPIQ ACIP A G+ DI G+A TGSGKT AF LP
Sbjct: 125 NSFLELNLSRPLLRACEALGYTKPTPIQAACIPIAL-TGR-DICGSAITGSGKTAAFSLP 182
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKEVAKGI 290
++RLL + PK +R L++TPTRELA+QV ++++A+
Sbjct: 183 TLERLL-------------------FRPKRVQAIRVLVLTPTRELAVQVHSMMEKLAQFT 223
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
++R IVGG+S++ QE L++ P++VV TPGR+ + + V+L L+ +LDEAD
Sbjct: 224 DIRCCLIVGGLSSKMQETALRSMPDVVVATPGRMIDHLRNSMS--VDLEDLAVLILDEAD 281
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
R++E G E++ ++ + P K+RQT++FSAT+ D
Sbjct: 282 RLLELGFNAEIRELVRLCP------------------------KRRQTMLFSATMTEEVD 317
>gi|354489656|ref|XP_003506977.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Cricetulus griseus]
gi|344257276|gb|EGW13380.1| ATP-dependent RNA helicase DDX24 [Cricetulus griseus]
Length = 853
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 119/214 (55%), Gaps = 23/214 (10%)
Query: 240 EREKAGKMLEEKGEEAEKY--APKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
+ E+AGK+ + + Y P+ L L++TPTRELA+QV H+ VAK ++ +
Sbjct: 357 DEEQAGKLKQGLCDRIAIYRVHPRRPLLGLVLTPTRELAVQVRQHIDAVAKFTGIKTAIL 416
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGGMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GH
Sbjct: 417 VGGMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGH 476
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 417
F EL +++ML N+ Q RQTLVFSAT+ L ++ H
Sbjct: 477 FAELSQLLEML------NDSQYN-------------PNRQTLVFSATLTLVHQVPARILH 517
Query: 418 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
K + ++ ++ L ++ GMR ++DLT
Sbjct: 518 K--KHVKKMDKTTKLDLLMQKIGMRGKPKVIDLT 549
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
TVS P A+ + + + AW +L + +++++ LGF PTPIQ +P A
Sbjct: 172 TVSKVPKKAKTWMPEVQDQKADVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLPPAI- 230
Query: 210 QGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
+ K+DI+GAAETGSGKTLAF +P++ +L+
Sbjct: 231 RDKLDILGAAETGSGKTLAFAIPMIHAVLQ 260
>gi|355621610|ref|ZP_09046211.1| hypothetical protein HMPREF1020_00290 [Clostridium sp. 7_3_54FAA]
gi|354823417|gb|EHF07748.1| hypothetical protein HMPREF1020_00290 [Clostridium sp. 7_3_54FAA]
Length = 477
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L PLL+K++ G+ P+PIQ+ IP G+ D++G A+TG+GKT AF LPI+
Sbjct: 3 FKDLQLSPLLLKALEEKGYVSPSPIQEKAIPHVL-AGR-DVLGCAQTGTGKTAAFALPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L++ EK KY+ K +R+LI+TPTRELALQ+ ++ KE +VR
Sbjct: 61 QNLMKPSEK-------------KYS-KRVIRSLILTPTRELALQIAENFKEYGSRTSVRC 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S Q L+ +++V TPGRL +L+ G V+L + FVLDEADRM++
Sbjct: 107 AVIFGGVSANPQIEELRRGIDILVATPGRLNDLVGQG---FVDLAHVEIFVLDEADRMLD 163
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II +LP+ ++QTL+FSAT+
Sbjct: 164 MGFIHDVRKIISLLPV------------------------RKQTLLFSATM 190
>gi|33150748|gb|AAP97252.1|AF134475_1 ATP-dependent RNA helicase [Homo sapiens]
Length = 486
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 115/210 (54%), Gaps = 21/210 (10%)
Query: 257 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 316
K PK L ++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+R+L RPE+
Sbjct: 8 KAYPKRPLLGRVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEI 67
Query: 317 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 376
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML N+
Sbjct: 68 VVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEML------ND 121
Query: 377 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 436
Q KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 122 SQYN-------------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMDKTAKLDLLM 166
Query: 437 ERAGMRANVAIVDLTNVSVLANKLEESFIE 466
++ GMR ++DLT L E+ I
Sbjct: 167 QKIGMRGKPKVIDLTRNEATVETLTETKIH 196
>gi|315645365|ref|ZP_07898490.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
gi|315279407|gb|EFU42713.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
Length = 506
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 132/231 (57%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L + P+++K++ + +KEPTPIQ IPA G+ D++G A+TG+GKT AF +P++
Sbjct: 19 FQDLNISPVILKALAKENYKEPTPIQAQAIPAVL-AGR-DLLGCAQTGTGKTAAFSVPMI 76
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L E+ K G +RAL+++PTRELALQ++D++K ++ +R
Sbjct: 77 QLLNEQPPKPGMA--------------RRIRALVLSPTRELALQISDNVKAYSQFTKLRS 122
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
IVGG+S + QER L+ ++++ TPGRL +LM+ + ++L + VLDEADRM++
Sbjct: 123 TAIVGGVSQKTQERALQQGADILIATPGRLLDLMN---QKRIDLQHVEILVLDEADRMLD 179
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II +P K+QTL FSAT+
Sbjct: 180 MGFIHDVKRIISKMP------------------------SKKQTLFFSATM 206
>gi|145498132|ref|XP_001435054.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402183|emb|CAK67657.1| unnamed protein product [Paramecium tetraurelia]
Length = 729
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 118/193 (61%), Gaps = 22/193 (11%)
Query: 175 WNELR-LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
WN+ +H +++++ GF PTP+Q + +Q II A++TGSGKTLAFG+P+
Sbjct: 3 WNQFEAIHQEVIQNLENNGFATPTPVQVEVL--NNYQKHKHIIIASQTGSGKTLAFGIPL 60
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ +L+ +K P + ALI+TPTRELA+Q+ HLK + N+
Sbjct: 61 ISEILKNMDKY---------------PAKQIIALILTPTRELAMQIYKHLKAIT---NLS 102
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFFVLDEADRM 352
+ +VGGMS EKQ+R++ A P +++ TPGRLW+ + E ++ L+ + F ++DEADRM
Sbjct: 103 IGCLVGGMSKEKQKRIINAAPVILIATPGRLWDFIENEENDKIKNLNLIKFLIIDEADRM 162
Query: 353 IENGHFRELQSII 365
+E GHF +L +I+
Sbjct: 163 VELGHFPQLDNIM 175
>gi|351698834|gb|EHB01753.1| ATP-dependent RNA helicase DDX24 [Heterocephalus glaber]
Length = 989
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 23/212 (10%)
Query: 242 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
E G++ +E ++ Y PK L L++TPTRELA+QV H+ VAK ++ +VG
Sbjct: 364 ELTGELKQELDDKIATYKTHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVG 423
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHSHLSNLRQLRCLVVDEADRMVEKGHFA 483
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 419
EL +++ML S KRQTLVFSAT+ L +L H
Sbjct: 484 ELSQLLEML-------------------SDSQYNPKRQTLVFSATLTLVHQAPARLLHK- 523
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
K + ++ ++ L ++ GMR ++DLT
Sbjct: 524 -KHVKKMDKTAKLDLLMQKIGMRGKPKVIDLT 554
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A + ++DI+GAAETGSGKTLAF
Sbjct: 190 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-VPAIRDRLDILGAAETGSGKTLAFA 248
Query: 231 LPIMQRLLEEREK 243
+P++ +L+ ++K
Sbjct: 249 IPMIHAVLQWQKK 261
>gi|258645792|ref|ZP_05733261.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Dialister invisus
DSM 15470]
gi|260403163|gb|EEW96710.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Dialister invisus
DSM 15470]
Length = 510
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 132/234 (56%), Gaps = 49/234 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+D + EL L P +MK+I +GF+EPTPIQK IPAA +GK D+IG A+TG+GKT AFG+
Sbjct: 2 YDTFKELGLVPEIMKAIEDMGFEEPTPIQKVSIPAAM-EGK-DLIGQAQTGTGKTAAFGI 59
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
PI++++ EKG +A ++++PTRELA+Q + + +A+ +
Sbjct: 60 PILEKI---------DTTEKGPQA-----------IVLSPTRELAIQSAEEMNRLAQYLP 99
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ +PI GG E+Q R L+ +P ++V TPGRL + M G ++L + VLDE D
Sbjct: 100 IHALPIYGGQDIERQFRALRKKPNIIVATPGRLMDHMKRGT---IDLSHVQILVLDEGDE 156
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G ++++I+ +P ++RQT+ FSAT+
Sbjct: 157 MVDMGFIDDIRTILAGMP------------------------EERQTMFFSATM 186
>gi|398814336|ref|ZP_10573017.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. BC25]
gi|398036605|gb|EJL29814.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. BC25]
Length = 529
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 50/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++ LH ++++I+ +GF+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVLDGG--DLIGQAQTGTGKTAAFGIPLV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK P ++A+++TPTRELA+QV L ++K VR
Sbjct: 62 ---------------------EKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRT 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG S Q R L+ ++VVGTPGR+ + + L +HTL VLDEAD M++
Sbjct: 101 LPIYGGQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDNVHTL---VLDEADEMLD 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++II+ +P +RQTL+FSAT+
Sbjct: 158 MGFIEDIETIINHMP------------------------DERQTLLFSATM 184
>gi|226312984|ref|YP_002772878.1| ATP-dependent RNA helicase [Brevibacillus brevis NBRC 100599]
gi|226095932|dbj|BAH44374.1| probable ATP-dependent RNA helicase [Brevibacillus brevis NBRC
100599]
Length = 529
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 50/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++ LH ++++I+ +GF+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVLDGG--DLIGQAQTGTGKTAAFGIPLV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK P ++A+++TPTRELA+QV L ++K VR
Sbjct: 62 ---------------------EKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRT 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG S Q R L+ ++VVGTPGR+ + + L +HTL VLDEAD M++
Sbjct: 101 LPIYGGQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDHVHTL---VLDEADEMLD 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++II+ +P +RQTL+FSAT+
Sbjct: 158 MGFIEDIETIINHMP------------------------DERQTLLFSATM 184
>gi|40018540|ref|NP_954550.1| ATP-dependent RNA helicase DDX24 [Rattus norvegicus]
gi|33638101|gb|AAQ24160.1| DEAD box polypeptide 24 [Rattus norvegicus]
gi|67677909|gb|AAH97262.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Rattus norvegicus]
gi|149025406|gb|EDL81773.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Rattus norvegicus]
Length = 851
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 119/214 (55%), Gaps = 23/214 (10%)
Query: 240 EREKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
+ E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +
Sbjct: 356 DEEQAGKLKQELCDQIAVYKVHPRRPLLGLVLTPTRELAVQVRQHIDAVAKFTGINTAIL 415
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGGMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E H
Sbjct: 416 VGGMSTQKQQRMLNRHPEIVIATPGRLWELIKEKHPHLSNLRQLRCLVIDEADRMVEKDH 475
Query: 358 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 417
F EL +++ML N+ Q RQTLVFSAT+ L ++ H
Sbjct: 476 FAELSQLLEML------NDSQYN-------------PNRQTLVFSATLTLVHQAPARILH 516
Query: 418 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLT 451
K + ++ ++ L ++ GMR ++DLT
Sbjct: 517 K--KHVKKMDKTAKLDLLMQKIGMRGKPKVIDLT 548
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 190 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 248
Query: 231 LPIMQRLLE 239
+P++ +L+
Sbjct: 249 IPMIHSVLQ 257
>gi|255724828|ref|XP_002547343.1| hypothetical protein CTRG_01650 [Candida tropicalis MYA-3404]
gi|240135234|gb|EER34788.1| hypothetical protein CTRG_01650 [Candida tropicalis MYA-3404]
Length = 711
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 204/388 (52%), Gaps = 59/388 (15%)
Query: 100 ANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAE 159
A EED G DE+ + EQE +++ ++ ++K + + ++ + E
Sbjct: 40 AMEEDEFGGFEDEEDDKKDDEQEDEQGDEQEDEQGDEQK--------DEPSTADSDKNGE 91
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMK-------------SIYRLGFKEPTPIQKACIPA 206
+VS A + NE+ L P+ K + +LGF++PTPIQK IP
Sbjct: 92 LGIVSFANLDLPLPDDNEINL-PIWQKGDLGSSISGYTLNGLSQLGFQKPTPIQKETIPI 150
Query: 207 AAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 266
A QGK D+IG A TGSGKTLA+G+PI+++ ++ + +++ ++ + P G
Sbjct: 151 AL-QGK-DVIGKATTGSGKTLAYGIPILEKYIQ----SLNTIKQNNKDKKINHPTG---- 200
Query: 267 LIITPTRELALQVTDHLKEVAKG--INVR-VVPIVGGMSTEKQERLLKARPELVVGTPGR 323
+I PTRELA QV +HL +AK ++ R +V I GG+S +KQ+RLLK P ++V TPGR
Sbjct: 201 IIFAPTRELAHQVVEHLNALAKYSPLSTRGIVSITGGLSIQKQQRLLKHGPGIIVATPGR 260
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
L EL+ G + L + VLDEADR++++GHF E + I+++ G N +++ T+
Sbjct: 261 LLELIQGDLELCKRLASTDIIVLDEADRLLQDGHFEEFEKILELF----GKNRPRNKSTE 316
Query: 384 TCVTVSSLQRKKRQTLVFSATIALS----ADFRKKLKHGSLKLKQSVNGLNSIETLSERA 439
K QTLVFSAT + D R+K K SL V ++ L+++
Sbjct: 317 W----------KWQTLVFSATFSRDLFGKLDKRQKGKTSSLMHNDEV-----VKLLNDKL 361
Query: 440 GMR-ANVAIVDLTNVSVLANKLEESFIE 466
+ A+VD +++ ++ E+ +E
Sbjct: 362 KFKDKKPAMVDANPKEIVSGQITEALVE 389
>gi|302795308|ref|XP_002979417.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
gi|300152665|gb|EFJ19306.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
Length = 749
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 162/307 (52%), Gaps = 57/307 (18%)
Query: 101 NEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEE 160
N ED D DG+E+ + Q+E+++ + +K++ ++ K++ + + +
Sbjct: 53 NAEDV-DQDGEEENDDEQREEDRGQDSTDEDEKEQLDHSQRKKSL-------DSKKEKPQ 104
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAE 220
S S ++ EL + L+++ LG+++PTPIQ ACIP A G+ DI G+A
Sbjct: 105 FFSSNHGASFNASSFIELNVSRPLLRACDALGYRQPTPIQAACIPLAL-AGR-DICGSAV 162
Query: 221 TGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQ 278
TGSGKT AF LPI++RLL + P+ +R LIITPTRELA+Q
Sbjct: 163 TGSGKTAAFALPILERLL-------------------FRPRRIPAIRVLIITPTRELAVQ 203
Query: 279 VTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 338
+ ++++A+ ++R +VGG+S++ QE L+ P++VV TPGR+ + + + V L
Sbjct: 204 LHSMIEKLAQFTDIRCSLVVGGLSSKVQEVALRTHPDIVVATPGRMIDHLRNTQS--VGL 261
Query: 339 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQT 398
L+ VLDEADR++E G E+ ++ + P +RQT
Sbjct: 262 EELAILVLDEADRLLELGFREEIHELVKLCP------------------------SRRQT 297
Query: 399 LVFSATI 405
++FSAT+
Sbjct: 298 MLFSATM 304
>gi|357152627|ref|XP_003576182.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 1
[Brachypodium distachyon]
Length = 780
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 141/256 (55%), Gaps = 50/256 (19%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
S+ PD ++ SE S + +++ EL + L+++ LG+++PTPIQ ACIP A G
Sbjct: 155 SSTPDPSKFFSSSEGA-SFKANSFLELNISRPLLRACEALGYQKPTPIQAACIPLAL-TG 212
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALII 269
+ DI G+A TGSGKT AF LP+++RLL + PK +R LI+
Sbjct: 213 R-DICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLIL 252
Query: 270 TPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 329
TPTRELA QV ++++A+ ++R IVGG+ T+ QE L++ P++VV TPGR+ + +
Sbjct: 253 TPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLPTKVQEVALRSNPDIVVATPGRIIDHLR 312
Query: 330 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS 389
V L L+ +LDEADR++E G E+ +I M P
Sbjct: 313 NSLS--VGLEDLAILILDEADRLLELGFSVEINELIRMCP-------------------- 350
Query: 390 SLQRKKRQTLVFSATI 405
K+RQT++FSAT+
Sbjct: 351 ----KRRQTMLFSATM 362
>gi|357152629|ref|XP_003576183.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 2
[Brachypodium distachyon]
Length = 770
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 141/256 (55%), Gaps = 50/256 (19%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
S+ PD ++ SE S + +++ EL + L+++ LG+++PTPIQ ACIP A G
Sbjct: 145 SSTPDPSKFFSSSEGA-SFKANSFLELNISRPLLRACEALGYQKPTPIQAACIPLAL-TG 202
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALII 269
+ DI G+A TGSGKT AF LP+++RLL + PK +R LI+
Sbjct: 203 R-DICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLIL 242
Query: 270 TPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 329
TPTRELA QV ++++A+ ++R IVGG+ T+ QE L++ P++VV TPGR+ + +
Sbjct: 243 TPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLPTKVQEVALRSNPDIVVATPGRIIDHLR 302
Query: 330 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS 389
V L L+ +LDEADR++E G E+ +I M P
Sbjct: 303 NSLS--VGLEDLAILILDEADRLLELGFSVEINELIRMCP-------------------- 340
Query: 390 SLQRKKRQTLVFSATI 405
K+RQT++FSAT+
Sbjct: 341 ----KRRQTMLFSATM 352
>gi|330840963|ref|XP_003292476.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
gi|325077283|gb|EGC31006.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
Length = 780
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 128/238 (53%), Gaps = 45/238 (18%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
+ E + EL L L+K++ +LGF +PTPIQ IP A + GK DI+ +A TGSGKT
Sbjct: 177 VEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKTIPLALN-GK-DILASASTGSGKTA 234
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF LPI++RLL ++E A +R L++ PTRELALQ L+ +A
Sbjct: 235 AFLLPILERLL-------------FRDSEYRA----IRVLVLLPTRELALQCQSVLENLA 277
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ N+ IVGG+S + QE L+ RP++V+ TPGRL + + H + L L +LD
Sbjct: 278 QFSNITSCLIVGGLSNKAQEVELRKRPDVVIATPGRLIDHLLNA--HGIGLEDLEILILD 335
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EADR+++ G E+ I+D P + RQT++FSAT+
Sbjct: 336 EADRLLDMGFKDEINKIVDSCPTS------------------------RQTMLFSATL 369
>gi|91084021|ref|XP_975350.1| PREDICTED: similar to pre-mRNA-splicing ATP-dependent RNA helicase
PRP28 [Tribolium castaneum]
gi|270008001|gb|EFA04449.1| hypothetical protein TcasGA2_TC014753 [Tribolium castaneum]
Length = 762
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 146/233 (62%), Gaps = 17/233 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E + L++ I ++G+KEPTPIQ+ IP DIIG AETGSGKTLAF +P+
Sbjct: 337 SWKESGIQKELLEIIDKVGYKEPTPIQRQAIPIGMQNR--DIIGVAETGSGKTLAFLIPL 394
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + + K+ E+ E+A++ P A+I+ PTRELA Q+ + + + + +R
Sbjct: 395 LSWI----QSLPKI--ERTEDADQ-GPY----AIILAPTRELAQQIEEETVKFGQPLGIR 443
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ V+DEADRMI
Sbjct: 444 TVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVMDEADRMI 500
Query: 354 ENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G ++Q I++ +P+TN + ++E ++ + + ++K RQT++F+AT+
Sbjct: 501 DLGFEADVQKILEYMPVTNLKPDSEEAEDSKIILANYNSKKKYRQTVMFTATM 553
>gi|427783023|gb|JAA56963.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 467
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 124/232 (53%), Gaps = 51/232 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L+ ++ + LG +P+PIQ+ CIPA GK D IG A+TGSGKTLAF LPI+
Sbjct: 12 FADLKLNKWIIDQLETLGISKPSPIQENCIPAIL-SGK-DCIGCAKTGSGKTLAFALPIL 69
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q+L E+ P G + ALI+TPTRELA Q+ D K V K + ++
Sbjct: 70 QKLFED-------------------PYG-IFALILTPTRELAFQICDQFKVVGKAVGLKE 109
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
IVGGM Q ++L P +VV TPGRL + + L + F VLDEADR++E
Sbjct: 110 CVIVGGMDMVTQGQVLAESPHVVVATPGRLADHLESCNTF--TLKRIRFLVLDEADRLLE 167
Query: 355 NGHFRE-LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
GHF E L++I LP KRQTL+FSATI
Sbjct: 168 -GHFNEQLKTIFAALP-------------------------KRQTLLFSATI 193
>gi|392571512|gb|EIW64684.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 772
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 157/319 (49%), Gaps = 61/319 (19%)
Query: 107 DGDGDE-DGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSE 165
D G+E DG +++E L + + ++ + + E+ S+ DD+EEE ++
Sbjct: 105 DASGEEFDGLSADEDEEDPLATSDEEAGAEAEEDEAMSDEEDEDAASSSGDDSEEETEAQ 164
Query: 166 --------------AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
AE T F + N L ++KSI LGF PTPIQ A IP A G
Sbjct: 165 KERKAAYFDSEQGPAEAHTSFLSMN---LSRPIIKSITTLGFTTPTPIQAATIPVAL-LG 220
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 271
K D++G A TGSGKT AF +P+++RL M ++G++A R LI+ P
Sbjct: 221 K-DVVGNAVTGSGKTAAFIIPMLERL---------MYRDRGKKA------AATRCLILAP 264
Query: 272 TRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
TRELA+Q + ++A ++R +VGG+S + QE L+ RP++V+ TPGRL + +
Sbjct: 265 TRELAVQCYEVGSKLAAHTDIRFALVVGGLSVKAQETNLRTRPDVVIATPGRLIDHLRNS 324
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 391
L L VLDEADRM+E+G EL II P +
Sbjct: 325 PT--FTLDALDILVLDEADRMLEDGFSDELTEIITSCPTS-------------------- 362
Query: 392 QRKKRQTLVFSATIALSAD 410
RQT++FSAT+ S D
Sbjct: 363 ----RQTMLFSATMTDSVD 377
>gi|33150792|gb|AAP97274.1|AF145022_1 ATP-dependent RNA helicase [Homo sapiens]
Length = 454
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 115/210 (54%), Gaps = 21/210 (10%)
Query: 257 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 316
K PK L ++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+R+L RPE+
Sbjct: 8 KAYPKRPLLGRVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEI 67
Query: 317 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 376
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML N+
Sbjct: 68 VVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEML------ND 121
Query: 377 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 436
Q KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 122 SQYN-------------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMDKTAKLDLLM 166
Query: 437 ERAGMRANVAIVDLTNVSVLANKLEESFIE 466
++ GMR ++DLT L E+ I
Sbjct: 167 QKIGMRGKPKVIDLTRNEATVETLTETKIH 196
>gi|193641157|ref|XP_001946607.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Acyrthosiphon pisum]
Length = 721
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 140/232 (60%), Gaps = 17/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E + +M+ I ++G+KEPTPIQ+ IP DIIG AETGSGKTLA+ +P
Sbjct: 294 WKESTIKSEIMEIIEKVGYKEPTPIQRQAIPIGFQNR--DIIGVAETGSGKTLAYLIP-- 349
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
L+E + KM E+ + Y+ +I+ PTRELA Q+ + + + + +R
Sbjct: 350 --LIEWIQSLPKMEREEDVDQGPYS-------IILAPTRELAQQIEEETLKFGQPLGIRT 400
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 401 VVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMID 457
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 405
G ++Q I++ +P+TN + + + ++ + + +KK RQT++F+AT+
Sbjct: 458 MGFEPDVQKILEYMPVTNLKPDNEDAEDESKLLANYYTKKKYRQTVMFTATM 509
>gi|255718883|ref|XP_002555722.1| KLTH0G15840p [Lachancea thermotolerans]
gi|238937106|emb|CAR25285.1| KLTH0G15840p [Lachancea thermotolerans CBS 6340]
Length = 797
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 220/514 (42%), Gaps = 103/514 (20%)
Query: 9 TYEHSKETKPNRRKRTRKSREAEKLN-----SLKWNSSFSAADNDPFAFLVGSNELDGGF 63
T+ + KP R+ ++ + E LN LKW S D F G E+DG
Sbjct: 28 THTKKRIVKPKRQTQSTRDEEKRNLNVVGANELKWKSVEIPDTMDDFGGFYGLEEIDGVD 87
Query: 64 LSL-----EEIDEASYNLQIPKPEKGKPGKKTNTKKRKRSSANEEDPGDG---------- 108
+ + + I N++ P+PE+ SS E +P DG
Sbjct: 88 VKVVNGKVQFITRNDSNIKGPEPEEP-------------SSQGEVEPSDGQEMEELVEFK 134
Query: 109 ---------------DGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSN 153
+G+++ N E + G++K+++ + ++ N
Sbjct: 135 NFDDFEEGELSAASSNGEDNENYSDNELGQEESENAGEQKQEQNHEESEANASGAIMEDN 194
Query: 154 GPDDAEEELVSEAEISTEFDA-------WNE-LRLHPLLMKSIYRLGFKEPTPIQKACIP 205
D E + AE+S + W E + L ++ + GF +PT IQ IP
Sbjct: 195 AADGELETNIFGAELSIPDNVEPDLLPQWTETMNLSMTTLQGLAAQGFTKPTDIQSMTIP 254
Query: 206 AAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLR 265
A +GK DI+G A TGSGKTLA+G+PI++RL+ +R +
Sbjct: 255 PAL-EGK-DIMGKASTGSGKTLAYGIPILERLVADRTTDKTV------------------ 294
Query: 266 ALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLK--ARPELVVG 319
LI TPTRELA QVT HL+++A I ++ + GG+S +KQERLLK +VV
Sbjct: 295 GLIFTPTRELAHQVTQHLQKLACVIIKKSPYAIISLTGGLSIQKQERLLKYDGCARIVVA 354
Query: 320 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQS 379
TPGR E++ K + VLDE DR++++GHF E I+ L G++
Sbjct: 355 TPGRFLEMLERDPKLIDRFSQTDCLVLDEVDRLLQDGHFEEFDKILKHL--------GKA 406
Query: 380 EQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLN-------SI 432
+ V S QT+VFSAT S D KL S K V G S+
Sbjct: 407 RNMKKKVK-SEFAGTGWQTMVFSAT--FSVDLFNKLSTTSWK---KVGGGKDDDEMELSL 460
Query: 433 ETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
+ L + R+ I+D + +K++ES IE
Sbjct: 461 KHLMTKIHFRSKPVIIDADPDHKIHSKIKESLIE 494
>gi|270005640|gb|EFA02088.1| hypothetical protein TcasGA2_TC007723 [Tribolium castaneum]
Length = 447
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 124/233 (53%), Gaps = 50/233 (21%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++++L+L+P +++ +G + PTPIQ CIP G+ D IGAA+TGSGKTLAF LPI
Sbjct: 5 SFDKLQLNPWIIRQCATIGVRSPTPIQTNCIPPIL-AGR-DCIGAAKTGSGKTLAFALPI 62
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q+L E+ P G + ALI+TPTRELA Q+ D + K +N+R
Sbjct: 63 LQKLCED-------------------PYG-IFALILTPTRELAFQIADQFAVIGKVMNLR 102
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
IVGGM Q + L +P +VV TPGRL + + + L F VLDEADR++
Sbjct: 103 HCVIVGGMDMVVQGKDLARKPHIVVATPGRLADHLESCNTF--NFNKLRFLVLDEADRLL 160
Query: 354 ENGHFRE-LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
GHF E +++I LP K+RQ L FSATI
Sbjct: 161 -GGHFDEQIKTIFQALP------------------------KERQNLFFSATI 188
>gi|399055613|ref|ZP_10743308.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
gi|398046822|gb|EJL39406.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
Length = 529
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 50/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++ LH ++++I+ +GF+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVLAGG--DLIGQAQTGTGKTAAFGIPLV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK P ++A+++TPTRELA+QV L ++K VR
Sbjct: 62 ---------------------EKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRT 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG S Q R L+ ++VVGTPGR+ + + L +HTL VLDEAD M++
Sbjct: 101 LPIYGGQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDHVHTL---VLDEADEMLD 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++II +P ++RQTL+FSAT+
Sbjct: 158 MGFIEDIETIITHMP------------------------EERQTLLFSATM 184
>gi|329926082|ref|ZP_08280693.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
gi|328939480|gb|EGG35833.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
Length = 506
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 133/231 (57%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L + P+++K++ + +K PTPIQ IPA G+ D++G A+TG+GKT AF +P++
Sbjct: 3 FEDLNISPVILKALAKENYKAPTPIQAQAIPAVL-AGR-DLLGCAQTGTGKTAAFSVPMI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L ++ K G +RAL+++PTRELALQ++D++K ++ +R
Sbjct: 61 QLLNQQPPKPGM--------------GRRIRALVLSPTRELALQISDNVKAYSQFTKLRS 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
IVGG+S + QER L+ ++++ TPGRL +LM+ +KH V+L + VLDEADRM++
Sbjct: 107 TAIVGGVSQKTQERALQQGADILIATPGRLLDLMN--QKH-VDLQHVEILVLDEADRMLD 163
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II +P K+QTL FSAT+
Sbjct: 164 MGFIHDVKRIIAKMP------------------------SKKQTLFFSATM 190
>gi|346466927|gb|AEO33308.1| hypothetical protein [Amblyomma maculatum]
Length = 586
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 139/232 (59%), Gaps = 17/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E L ++ I LG+K+PTPIQ+ IP DIIG AETGSGKTLAF LP++
Sbjct: 160 WSESGLPSSILDIIKELGYKDPTPIQRQAIPIGLQNR--DIIGVAETGSGKTLAFLLPLL 217
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K+ E+ E+A++ P A+I+ PTRELA Q+ + + AK + +R
Sbjct: 218 VWITS----LPKI--ERQEDADQ-GPY----AIIMAPTRELAQQIDEETTKFAKMLEIRS 266
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG+S E+Q L+ E+V+ TPGRL +++ E + L ++ VLDEADRMI+
Sbjct: 267 VAVIGGLSREEQGFRLRLGCEIVIATPGRLIDVL---ENRYLVLSRCTYIVLDEADRMID 323
Query: 355 NGHFRELQSIIDMLPMTNGS-NEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G E+Q I+D +P+TN + ++E + + + + K RQT++F+AT+
Sbjct: 324 MGFEGEVQKILDYMPVTNQKPDTDEAEDEEKLLANFASKHKYRQTVMFTATM 375
>gi|297800452|ref|XP_002868110.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
gi|297313946|gb|EFH44369.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 133/240 (55%), Gaps = 49/240 (20%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
+S D++ EL L L+++ LG+K+PTPIQ ACIP A G+ D+ +A TGSGKT
Sbjct: 165 VSFHADSFMELNLSRPLLRACETLGYKKPTPIQAACIPLAL-TGR-DLCASAITGSGKTA 222
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKE 285
AF LP ++RLL + PK R LI+TPTRELA+Q+ +++
Sbjct: 223 AFALPTLERLL-------------------FRPKRVFATRVLILTPTRELAVQIHSMIQK 263
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+A+ +++ IVGG+S +QE +L++ P++VV TPGR+ + + V+L L+ +
Sbjct: 264 LAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLI 321
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
LDEADR+++ G E+ ++ + P K+RQT++FSAT+
Sbjct: 322 LDEADRLLQTGFATEITELVRLCP------------------------KRRQTMLFSATM 357
>gi|393218427|gb|EJD03915.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 782
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 128/237 (54%), Gaps = 43/237 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ + L L+K++ LGF PTPIQ A IP A GK D++G A TGSGKT AF +P+
Sbjct: 186 SFTTMSLSRPLLKALTALGFSTPTPIQVATIPVALL-GK-DVVGNAVTGSGKTAAFMIPV 243
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
++RL M E+G+ K +R +++ PTREL +Q D K+++ ++VR
Sbjct: 244 LERL---------MYRERGKN------KAAVRCVVLVPTRELGVQCVDVAKKLSAFMDVR 288
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ IVGG+S + QE L+ RP++V+ TPGRL + + L TL +LDEADRM+
Sbjct: 289 ISLIVGGLSLKSQEAELRTRPDIVIATPGRLIDHLRNSPSF--GLETLDVLILDEADRML 346
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
+G EL+ II Q C T RQT++FSAT+ D
Sbjct: 347 SDGFADELKEII-----------------QACPT-------SRQTMLFSATMTDDVD 379
>gi|290968757|ref|ZP_06560294.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
genomosp. type_1 str. 28L]
gi|335049114|ref|ZP_08542124.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
199-6]
gi|290781053|gb|EFD93644.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
genomosp. type_1 str. 28L]
gi|333764226|gb|EGL41626.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
199-6]
Length = 520
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 130/234 (55%), Gaps = 47/234 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+ + L++ ++++++ +GF+EPTPIQ IP A QG D+IG A+TG+GKT AFG+
Sbjct: 2 LEKFQNLKISEVILQALNAMGFEEPTPIQAESIPVAL-QG-ADMIGQAQTGTGKTAAFGI 59
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P+++++L K P ++ ++++PTRELA+QV + L +A+
Sbjct: 60 PVLEKIL------------------KNEPTQSIQTVVLSPTRELAMQVAEELNHLAQCTT 101
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
++ +PI GG E+Q R L+ P+++V TPGRL + M G L ++HT+ VLDEAD
Sbjct: 102 IQALPIYGGQDMERQLRRLRKHPQIIVATPGRLMDHMKRGTIDLSDIHTI---VLDEADE 158
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G ++ +I+ P T RQTL+FSAT+
Sbjct: 159 MLDMGFIDDINTIMSATPDT------------------------RQTLLFSATM 188
>gi|433545971|ref|ZP_20502309.1| ATP-dependent RNA helicase [Brevibacillus agri BAB-2500]
gi|432182587|gb|ELK40150.1| ATP-dependent RNA helicase [Brevibacillus agri BAB-2500]
Length = 549
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 50/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++ LH ++++I+ +GF+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P++
Sbjct: 24 FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVLAGG--DLIGQAQTGTGKTAAFGIPLV 81
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK P ++A+++TPTRELA+QV L ++K VR
Sbjct: 82 ---------------------EKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRT 120
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG S Q R L+ ++VVGTPGR+ + + L +HTL VLDEAD M++
Sbjct: 121 LPIYGGQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDHVHTL---VLDEADEMLD 177
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++II +P ++RQTL+FSAT+
Sbjct: 178 MGFIEDIETIITHMP------------------------EERQTLLFSATM 204
>gi|365982507|ref|XP_003668087.1| hypothetical protein NDAI_0A06900 [Naumovozyma dairenensis CBS 421]
gi|343766853|emb|CCD22844.1| hypothetical protein NDAI_0A06900 [Naumovozyma dairenensis CBS 421]
Length = 659
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 160/308 (51%), Gaps = 45/308 (14%)
Query: 175 WNELRLHPL-LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
W L L +++ + LGF +PT IQ IP A DI+G A TGSGKTLA+G+PI
Sbjct: 71 WTNLAKFSLTILQGLQSLGFTKPTAIQAKAIPYALENA--DIMGKASTGSGKTLAYGIPI 128
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA----KG 289
++ L++ +K + ++ K ALI TPTRELA QVT HL+ ++ K
Sbjct: 129 LENLIKTAKK---------DSSQTDGIKNKPIALIFTPTRELAQQVTKHLQNISQLFLKN 179
Query: 290 INVRVVPIVGGMSTEKQERLLKARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
++ + GG+S +KQERLLK ++V+ TPGR EL+ + + VLD
Sbjct: 180 SPYAILSLTGGLSIQKQERLLKYDNSGKIVIATPGRFLELLEKNNDLIERFCQIDTLVLD 239
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR----QTLVFSA 403
EADR++++GHF E + I+ L GQ + L+ KK QT+++SA
Sbjct: 240 EADRLLQDGHFDEFEKILKYL--------GQKRK--------ELKLKKANQYWQTMIYSA 283
Query: 404 TIALSADFRKKLKHGSL----KLKQSVNGLNSI-ETLSERAGMRANVAIVDLTNVSVLAN 458
T S D KL + S K+KQ N + ++ L + ++ I+D+ +++
Sbjct: 284 T--FSIDLFDKLANSSWKSNKKIKQYENEMETVLHHLMNKIHFQSKPIIIDMNPDQKISS 341
Query: 459 KLEESFIE 466
+++ES IE
Sbjct: 342 QIKESLIE 349
>gi|30683736|ref|NP_193396.3| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
gi|75338927|sp|Q9ZRZ8.1|RH28_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|3776027|emb|CAA09214.1| RNA helicase [Arabidopsis thaliana]
gi|110736657|dbj|BAF00292.1| RNA helicase like protein [Arabidopsis thaliana]
gi|332658378|gb|AEE83778.1| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
Length = 789
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 131/240 (54%), Gaps = 49/240 (20%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
+S D + EL L L+++ LG+K+PTPIQ ACIP A G+ D+ +A TGSGKT
Sbjct: 162 VSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLAL-TGR-DLCASAITGSGKTA 219
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKE 285
AF LP ++RLL + PK R LI+TPTRELA+Q+ ++
Sbjct: 220 AFALPTLERLL-------------------FRPKRVFATRVLILTPTRELAVQIHSMIQN 260
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+A+ +++ IVGG+S +QE +L++ P++VV TPGR+ + + V+L L+ +
Sbjct: 261 LAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLI 318
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
LDEADR+++ G E+ ++ + P K+RQT++FSAT+
Sbjct: 319 LDEADRLLQTGFATEITELVRLCP------------------------KRRQTMLFSATM 354
>gi|365156794|ref|ZP_09353090.1| hypothetical protein HMPREF1015_01991 [Bacillus smithii 7_3_47FAA]
gi|363626851|gb|EHL77816.1| hypothetical protein HMPREF1015_01991 [Bacillus smithii 7_3_47FAA]
Length = 473
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 131/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KSI +LGF+E TPIQ A IP + GK D+IG A+TG+GKT AFG+P+M
Sbjct: 4 FVELGLSPALLKSIDQLGFEEATPIQAATIPKSL-DGK-DLIGQAQTGTGKTAAFGIPLM 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ + H++ +II PTRELA+QV++ L ++ VR+
Sbjct: 62 EKIDTKNH--------------------HIQGMIIAPTRELAIQVSEELYKIGYHKRVRI 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GG ++Q R LK +P ++VGTPGR+ + ++ L LHTL VLDEAD M+
Sbjct: 102 LAVYGGQDIQRQIRALKKQPHVIVGTPGRILDHINRQTLKLDHLHTL---VLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++++I+ +P K+RQTL+FSAT+
Sbjct: 159 MGFIQDIETILSHMP------------------------KERQTLLFSATM 185
>gi|412987541|emb|CCO20376.1| predicted protein [Bathycoccus prasinos]
Length = 843
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 131/250 (52%), Gaps = 62/250 (24%)
Query: 166 AEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
A+ T F A +N+L L L ++ +LG+ PTPIQ A IP A G+ D+ G A+TGS
Sbjct: 201 AKDGTTFSAQCFNDLHLSRPLCRACEKLGYATPTPIQAAIIPIAL-TGR-DVCGRAQTGS 258
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRAL---IITPTRELALQVT 280
GKT AF LP+++R+L + PK + A+ I+ PTRELA+Q
Sbjct: 259 GKTAAFALPLLERML-------------------HRPKNAVSAIHVVIMVPTRELAVQCA 299
Query: 281 DHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 340
++ + + NV+V IVGG+S E+Q L+ RPE+VV TPGRL + H+ H+
Sbjct: 300 QMIQRLGEYTNVQVATIVGGLSMERQAAALRQRPEIVVATPGRLID-------HVRNTHS 352
Query: 341 LSF-----FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
F VLDEADR++E G E++ I+ +P ++
Sbjct: 353 FGFEDVAAVVLDEADRLLEMGFLEEIKEIVRNMP------------------------RQ 388
Query: 396 RQTLVFSATI 405
RQTL+FSAT+
Sbjct: 389 RQTLLFSATL 398
>gi|354584019|ref|ZP_09002916.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
gi|353197281|gb|EHB62774.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
Length = 490
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 133/231 (57%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L + P+++K++ + +K PTPIQ IPA G+ D++G A+TG+GKT AF +P++
Sbjct: 3 FQDLNISPIILKALAKENYKTPTPIQAQAIPAVL-AGR-DLLGCAQTGTGKTAAFSVPMI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L E+ K G +RAL+++PTRELALQ++D++K ++ +R
Sbjct: 61 QLLNEQPPKPGM--------------GRRIRALVLSPTRELALQISDNVKAYSQFTKLRS 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
IVGG+S + QER L+ ++++ TPGRL +L++ +KH V+L + VLDEADRM++
Sbjct: 107 TAIVGGVSQKTQERALQQGADILIATPGRLIDLIN--QKH-VDLQHVEILVLDEADRMLD 163
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II +P K+QTL FSAT+
Sbjct: 164 MGFIHDVKRIIAKMP------------------------SKKQTLFFSATM 190
>gi|313885567|ref|ZP_07819317.1| DEAD-box ATP-dependent RNA helicase CshA [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619297|gb|EFR30736.1| DEAD-box ATP-dependent RNA helicase CshA [Eremococcus coleocola
ACS-139-V-Col8]
Length = 526
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 133/236 (56%), Gaps = 50/236 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++L L L++++ LGF+EPTPIQ+ IP QG+ D++G A+TG+GKT AFGLP++
Sbjct: 3 FSDLNLKTELIETLDELGFEEPTPIQQQAIPFVL-QGR-DLVGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q G + + A L+ALII PTRELA+QV D L ++KG+ +V
Sbjct: 61 Q----------------GLDTDHRA----LQALIIAPTRELAIQVHDELYSLSKGLKTKV 100
Query: 295 VPIVGGMSTEKQ-ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG S KQ +R+ K +P+++VGTPGRL +LM + +++ L ++DEAD M+
Sbjct: 101 YAVYGGYSIGKQIDRIQKLKPQVIVGTPGRLLDLM---RRQIIDTSYLKTLIMDEADEML 157
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 409
G ++++I++ P + RQTL+FSAT+ S
Sbjct: 158 NMGFIEDIKAIVEQTPSS------------------------RQTLMFSATMPKSV 189
>gi|284048361|ref|YP_003398700.1| DEAD/DEAH box helicase [Acidaminococcus fermentans DSM 20731]
gi|283952582|gb|ADB47385.1| DEAD/DEAH box helicase domain protein [Acidaminococcus fermentans
DSM 20731]
Length = 544
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 139/242 (57%), Gaps = 49/242 (20%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
+ AE E ++ +L L ++ ++ +GF+EP+PIQK IP A +G+ D+IG A+TG+
Sbjct: 10 TTAESKPEITSFEDLNLDRKILAALKEMGFEEPSPIQKGAIPMAL-EGE-DLIGQAQTGT 67
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 283
GKT AFG+PI+Q++ E+++ H++AL+++PTREL +QV D +
Sbjct: 68 GKTAAFGIPIIQKI-NEKDR-------------------HIQALVMSPTRELCIQVADEI 107
Query: 284 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 343
++ K +RV+P+ GG E+Q R LK ++V+GTPGRL + + G ++L ++F
Sbjct: 108 SKIGKTKRIRVLPVYGGQPIERQIRSLKRGIQVVIGTPGRLLDHIRRGT---IDLEYVNF 164
Query: 344 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 403
VLDEAD M++ G ++++II +P +RQT++FSA
Sbjct: 165 LVLDEADEMLDMGFVDDMENIIKNVP------------------------PERQTMLFSA 200
Query: 404 TI 405
T+
Sbjct: 201 TM 202
>gi|432850192|ref|XP_004066748.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX24-like [Oryzias latipes]
Length = 820
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 118/202 (58%), Gaps = 23/202 (11%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L +++TPTRELA+QV H+ V K +++ +VGGM+ +KQ+R+LK PE+++ TPGR
Sbjct: 351 LLGMVLTPTRELAVQVKHHIDAVTKFTDIKTAILVGGMAQQKQKRMLKRCPEIIIATPGR 410
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
LW+L+ HL+ L L V+DEADRM+E GHF EL+S+++ML T+ +
Sbjct: 411 LWDLIKEKHPHLLNLRHLRCLVIDEADRMVERGHFAELESLLEMLNTTHFN--------- 461
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
KRQT VFSAT+ L+ +L L+ K+++ + ++ L E+ G+++
Sbjct: 462 ----------PKRQTFVFSATLTLTHSLPSRL----LQKKKNLEKRSKLDILIEKVGIKS 507
Query: 444 NVAIVDLTNVSVLANKLEESFI 465
++DLT L E+ I
Sbjct: 508 KPKVIDLTRKEATVETLTETQI 529
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 10/107 (9%)
Query: 133 KKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLG 192
+++ + G KT + G DD ++ VS AW +L + ++K++ LG
Sbjct: 161 RERSRHGGAAKTKNWTSAALCGSDDDKQSDVS---------AWKDLFVPSSVLKALSSLG 211
Query: 193 FKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
F+ PTPIQ +P A + +D++GAAETGSGKTLAFG+P++ +LE
Sbjct: 212 FESPTPIQALALPPAI-RDHMDVLGAAETGSGKTLAFGIPMIHAILE 257
>gi|198474199|ref|XP_001356589.2| GA10248 [Drosophila pseudoobscura pseudoobscura]
gi|198138291|gb|EAL33653.2| GA10248 [Drosophila pseudoobscura pseudoobscura]
Length = 828
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 144/239 (60%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +WNE P ++ I ++G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 395 IPNPIRSWNESGFPPEIIDIIDKVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 452
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 453 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETIKFG 501
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 502 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 558
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + + + + + + +KK RQT++F+AT+
Sbjct: 559 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDENKLMENFYTKKKYRQTVMFTATM 617
>gi|326431316|gb|EGD76886.1| hypothetical protein PTSG_08233 [Salpingoeca sp. ATCC 50818]
Length = 777
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 164/306 (53%), Gaps = 45/306 (14%)
Query: 117 VQKEQE-KNLKNQKGKKKKK---------------KKKGKKIKTVEESVTVSNGPDDAEE 160
VQKEQE + L+ + KK+K+ K+ +I + ++T + G
Sbjct: 378 VQKEQEDRRLRKLRQKKQKQLFDERHWSEKPLADMTKRDWRIFREDYNITTTGG------ 431
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAE 220
I + W+E L P +++ I LGFKEPTPIQ+A +P DI G AE
Sbjct: 432 ------RIPSPLRFWSESGLDPRILEIIDDLGFKEPTPIQRAALPIGL--TNRDICGVAE 483
Query: 221 TGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVT 280
TGSGKTLAF LP++Q +L K+ E+ + YA +I+ P+REL Q+
Sbjct: 484 TGSGKTLAFVLPLLQWILS----LPKLEREQDIDNGPYA-------IILAPSRELVQQIE 532
Query: 281 DHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 340
+ ++ + + VR V ++GG S E+Q L+ E+V+ TPGRL +++ ++LV L+
Sbjct: 533 EQTRKFSDPLGVRTVAVIGGASREEQGFQLRQGCEVVIATPGRLIDVLEN--RYLV-LNQ 589
Query: 341 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS-NEGQSEQTQTCVTVSSLQRKKRQTL 399
++ V+DEADRM++ G +Q I++ +P+TN N ++E + + K RQT+
Sbjct: 590 CTYVVMDEADRMLDMGFEPAVQQILEHVPVTNQKPNTDEAEDEAFLLQDIKNKNKYRQTV 649
Query: 400 VFSATI 405
+F+AT+
Sbjct: 650 LFTATM 655
>gi|156391217|ref|XP_001635665.1| predicted protein [Nematostella vectensis]
gi|156222761|gb|EDO43602.1| predicted protein [Nematostella vectensis]
Length = 777
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 138/231 (59%), Gaps = 16/231 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E ++ +++ + +LG+K+PTPIQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 352 WKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFAIPLL 409
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ G E+ +A++ P ALI+ PTRELA Q+ + + + + + +R
Sbjct: 410 VWIM------GLPKIERDNDADQ-GPY----ALILAPTRELAQQIEEEILKFGRPLGIRT 458
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L+ S+ V+DEADRMI+
Sbjct: 459 VSVIGGLSREDQGFQLRLGVEIVIATPGRLIDVLEN--RYLV-LNRCSYIVMDEADRMID 515
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G E+Q I++ LP++N + + + + + K RQT++F+AT+
Sbjct: 516 MGFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMFTATM 566
>gi|323485816|ref|ZP_08091151.1| ATP-dependent RNA helicase RhlE [Clostridium symbiosum WAL-14163]
gi|323400804|gb|EGA93167.1| ATP-dependent RNA helicase RhlE [Clostridium symbiosum WAL-14163]
Length = 458
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 132/231 (57%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L PLL+K++ G+ P+PIQ+ IP G+ D++G A+TG+GKT AF LPI+
Sbjct: 15 FKDLQLSPLLLKALEEKGYVSPSPIQEKAIPHVL-AGR-DVLGCAQTGTGKTAAFALPII 72
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L++ EK KY+ K +R+LI+TPTR+LALQ+ ++ KE +VR
Sbjct: 73 QNLMKPSEK-------------KYS-KRVIRSLILTPTRKLALQIAENFKEYGSRTSVRC 118
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S Q L+ +++V TPGRL +L+ G V+L + FVLDEADRM++
Sbjct: 119 AVIFGGVSANPQIEELRRGIDILVATPGRLNDLVGQG---FVDLAYVEIFVLDEADRMLD 175
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II +LP+ ++QTL+FSAT+
Sbjct: 176 MGFIHDVKKIISLLPV------------------------RKQTLLFSATM 202
>gi|257091933|ref|YP_003165574.1| DEAD/DEAH box helicase domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044457|gb|ACV33645.1| DEAD/DEAH box helicase domain protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 474
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 135/242 (55%), Gaps = 44/242 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E+ LHP ++K++ G+ EPTP+Q+ IP A +G+ D++ +++TGSGKT AF LP +
Sbjct: 3 FAEIGLHPAILKALTDSGYSEPTPVQQQAIPPAI-EGR-DLMVSSQTGSGKTAAFMLPAL 60
Query: 235 QRL-LEEREKAGKMLEEKGEEAEKYAPKGH---------LRALIITPTRELALQVTDHLK 284
R L+ER A E+G P+GH R L++TPTRELALQVT +
Sbjct: 61 HRFALQERPAAVPRPSERGAAR----PRGHDRQRFQAAQPRMLVLTPTRELALQVTAATE 116
Query: 285 EVAKGIN-VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 343
+ + ++ VR V I+GGM KQ LL PE++V TPGRL + MS G+ ++ L
Sbjct: 117 KYGRQLHHVRAVAILGGMPYPKQMELLGRNPEILVATPGRLIDHMSSGK---IDFSQLQI 173
Query: 344 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 403
VLDEADRM++ G +++ I+ P GS RQTL+FSA
Sbjct: 174 LVLDEADRMLDMGFIEDIERIVAATP---GS---------------------RQTLLFSA 209
Query: 404 TI 405
T+
Sbjct: 210 TL 211
>gi|375308018|ref|ZP_09773305.1| dead/deah box helicase domain-containing protein [Paenibacillus sp.
Aloe-11]
gi|375080349|gb|EHS58570.1| dead/deah box helicase domain-containing protein [Paenibacillus sp.
Aloe-11]
Length = 526
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 141/255 (55%), Gaps = 54/255 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E L P ++++I LGF+E TPIQ IP A QGK D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQAKSIPIAL-QGK-DMIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ EK +RALI+ PTRELA+QV + ++++++ +R
Sbjct: 62 SKIARNDEK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRT 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 102 LPIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 159 MGFMEDIQSILKQVP------------------------DERQTMLFSATMPPNIKRLAE 194
Query: 410 DFRKKLKHGSLKLKQ 424
F K +H S+ KQ
Sbjct: 195 QFLKDPEHVSVIPKQ 209
>gi|366996959|ref|XP_003678242.1| hypothetical protein NCAS_0I02320 [Naumovozyma castellii CBS 4309]
gi|342304113|emb|CCC71900.1| hypothetical protein NCAS_0I02320 [Naumovozyma castellii CBS 4309]
Length = 731
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 157/310 (50%), Gaps = 46/310 (14%)
Query: 169 STEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
S + W +L +M+ + LGF +PT IQ IP A DI+G A TGSGKTL
Sbjct: 147 SVDLPDWTKLATFSTTIMQGLQSLGFTKPTEIQAKAIPFALKNE--DIMGKASTGSGKTL 204
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
A+G+PI++ L++ G ++ K ALI TPTRELA QVT HL+ ++
Sbjct: 205 AYGIPILENLIKTF----------GNDSNKPI------ALIFTPTRELAQQVTKHLQNIS 248
Query: 288 KGI----NVRVVPIVGGMSTEKQERLLKA--RPELVVGTPGRLWELMSGGEKHLVELHTL 341
K ++ + GG+S +KQERLLK ++V+ TPGR EL+ + + +
Sbjct: 249 KLFLKNSQYSILSLTGGLSIQKQERLLKYDNSGKIVIATPGRFLELLEKNNELVERFAQI 308
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 401
VLDEADR++++GHF E + I+ L GQ + L+ QT+++
Sbjct: 309 DTLVLDEADRLLQDGHFDEFEKILKYL--------GQKRKEM------KLKNTYWQTMIY 354
Query: 402 SATIALSADFRKKLKHGSLKLKQSVNGLNS-----IETLSERAGMRANVAIVDLTNVSVL 456
SAT S D KL + S K + V +S + L + ++ ++D+ +
Sbjct: 355 SAT--FSIDLFDKLANSSWKSNKKVKQYDSEMETVLHHLMNKIHFKSKPILIDMNPNQKI 412
Query: 457 ANKLEESFIE 466
+++++ES IE
Sbjct: 413 SSQIKESLIE 422
>gi|222423183|dbj|BAH19569.1| AT4G16630 [Arabidopsis thaliana]
Length = 686
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 131/240 (54%), Gaps = 49/240 (20%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
+S D + EL L L+++ LG+K+PTPIQ ACIP A G+ D+ +A TGSGKT
Sbjct: 162 VSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLAL-TGR-DLCASAITGSGKTA 219
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKE 285
AF LP ++RLL + PK R LI+TPTRELA+Q+ ++
Sbjct: 220 AFALPTLERLL-------------------FRPKRVFATRVLILTPTRELAVQIHSMIQN 260
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+A+ +++ IVGG+S +QE +L++ P++VV TPGR+ + + V+L L+ +
Sbjct: 261 LAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLI 318
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
LDEADR+++ G E+ ++ + P K+RQT++FSAT+
Sbjct: 319 LDEADRLLQTGFATEITELVRLCP------------------------KRRQTMLFSATM 354
>gi|447911698|ref|YP_007393110.1| Cold-shock DEAD-box protein A [Enterococcus faecium NRRL B-2354]
gi|445187407|gb|AGE29049.1| Cold-shock DEAD-box protein A [Enterococcus faecium NRRL B-2354]
Length = 503
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 54/260 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +R++ L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDPDRQE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLKQSVNGL 429
F K H +K K+ L
Sbjct: 194 KFMKNPHHVKIKAKEMTADL 213
>gi|403218070|emb|CCK72562.1| hypothetical protein KNAG_0K01980 [Kazachstania naganishii CBS
8797]
Length = 721
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 157/314 (50%), Gaps = 45/314 (14%)
Query: 163 VSEAEISTEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAET 221
V+ +E+ E W L ++ + +LG+ +PT IQ IP A +G DI+G A T
Sbjct: 133 VNFSEVEVELPDWQALGDFSMTTLQGLSKLGYTKPTEIQSKTIPLAL-EGH-DIMGKAST 190
Query: 222 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 281
GSGKTLA+G+PI++ L++ ++ A + ALI TPTRELA QVT
Sbjct: 191 GSGKTLAYGIPILENLIKGKDSARPV------------------ALIFTPTRELASQVTS 232
Query: 282 HLKEVAKGI-----NVRVVPIVGGMSTEKQERLLK--ARPELVVGTPGRLWELMSGGEKH 334
HL + + I ++ + GG+S +KQER+LK ++++ TPGR EL+
Sbjct: 233 HLTNLGESIFTGRNKFAIMSLTGGLSIQKQERVLKYDGSGQIIIATPGRFLELLEKRSDL 292
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 394
+ + VLDEADR++++GHF E I+ +L EG +R
Sbjct: 293 VARFAQIETLVLDEADRLLQDGHFDEFTKILKLLSQARREKEG--------------KRS 338
Query: 395 KRQTLVFSATIALSADFRKKLKHGS-LKLKQSVNGLNSI-ETLSERAGMRANVAIVDLTN 452
QTL+FSAT +L F K +G LK+S N L + + L + + I+D
Sbjct: 339 HWQTLIFSATFSLDL-FNKLASNGQGHTLKESDNELEEVLKQLMTKIHFKERPTIIDANP 397
Query: 453 VSVLANKLEESFIE 466
+ +++E+ IE
Sbjct: 398 FDKVNMQVKEALIE 411
>gi|310641357|ref|YP_003946115.1| DEAD/DEAH box helicase [Paenibacillus polymyxa SC2]
gi|386040399|ref|YP_005959353.1| DEAD-box ATP-dependent RNA helicase ydbR [Paenibacillus polymyxa
M1]
gi|309246307|gb|ADO55874.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
polymyxa SC2]
gi|343096437|emb|CCC84646.1| DEAD-box ATP-dependent RNA helicase ydbR [Paenibacillus polymyxa
M1]
Length = 525
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 142/255 (55%), Gaps = 54/255 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E L P ++++I LGF+E TPIQ IP A QGK D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQSKSIPIAL-QGK-DMIGQAQTGTGKTAAFGIPMI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ + EK +RALI+ PTRELA+QV + ++++++ +R
Sbjct: 62 NKISKNDEK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRT 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 102 LPIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 159 MGFMEDIQSILKQVP------------------------DERQTMLFSATMPPNIKRLAE 194
Query: 410 DFRKKLKHGSLKLKQ 424
F K +H S+ KQ
Sbjct: 195 QFLKDPEHVSVIPKQ 209
>gi|261404961|ref|YP_003241202.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261281424|gb|ACX63395.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. Y412MC10]
Length = 506
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 132/231 (57%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ L + P+++K++ + +K PTPIQ IPA G+ D++G A+TG+GKT AF +P++
Sbjct: 3 FENLNISPVILKALAKENYKAPTPIQAQAIPAVL-AGR-DLLGCAQTGTGKTAAFSVPMI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L ++ K G +RAL+++PTRELALQ++D++K ++ +R
Sbjct: 61 QLLNQQPPKPGM--------------GRRIRALVLSPTRELALQISDNVKAYSQFTKLRS 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
IVGG+S + QER L+ ++++ TPGRL +LM+ +KH V+L + VLDEADRM++
Sbjct: 107 TAIVGGVSQKTQERALQQGADILIATPGRLLDLMN--QKH-VDLQHVEILVLDEADRMLD 163
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II +P K+QTL FSAT+
Sbjct: 164 MGFIHDVKRIIAKMP------------------------SKKQTLFFSATM 190
>gi|195388290|ref|XP_002052813.1| GJ17767 [Drosophila virilis]
gi|194149270|gb|EDW64968.1| GJ17767 [Drosophila virilis]
Length = 835
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 144/239 (60%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +WNE P +++ I +G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 402 IPNPIRSWNESGFPPEIIEIIDTVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 459
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 460 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETIKFG 508
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 509 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 565
Query: 348 EADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 566 EADRMIDMGFEPDVQKILEYMPVTNLKPDSEEAEDEKKLMENFYTKKKYRQTVMFTATM 624
>gi|228474931|ref|ZP_04059660.1| cold-shock DEAD box protein A [Staphylococcus hominis SK119]
gi|314935968|ref|ZP_07843318.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
hominis subsp. hominis C80]
gi|418618997|ref|ZP_13181840.1| DEAD/DEAH box helicase [Staphylococcus hominis VCU122]
gi|228271163|gb|EEK12543.1| cold-shock DEAD box protein A [Staphylococcus hominis SK119]
gi|313655974|gb|EFS19716.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
hominis subsp. hominis C80]
gi|374825858|gb|EHR89777.1| DEAD/DEAH box helicase [Staphylococcus hominis VCU122]
Length = 503
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 132/226 (58%), Gaps = 36/226 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + +K++ +GFKEPTPIQK IP +GK DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVKTLEEMGFKEPTPIQKESIPYTL-EGK-DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K ++ALI+ PTRELA+QV + L+E ++G N++V
Sbjct: 62 ---------------------EKVVGKSGVQALILAPTRELAMQVAEQLREFSRGQNIQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM ++Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
G +++ I+D +P +EQ QT + S+ K QTLV
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQRQTML-FSATMPKAIQTLV 193
>gi|390456495|ref|ZP_10242023.1| DEAD-box ATP-dependent RNA helicase ydbR [Paenibacillus peoriae
KCTC 3763]
Length = 526
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 142/255 (55%), Gaps = 54/255 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E L P ++++I LGF+E TPIQ IP A QGK D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQAISIPIAL-QGK-DMIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ + EK +RALI+ PTRELA+QV + ++++++ +R
Sbjct: 62 SKISKNDEK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRT 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 102 LPIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 159 MGFMEDIQSILKQVP------------------------DERQTMLFSATMPPNIKRLAE 194
Query: 410 DFRKKLKHGSLKLKQ 424
F K +H S+ KQ
Sbjct: 195 QFLKDPEHVSVIPKQ 209
>gi|227206264|dbj|BAH57187.1| AT4G16630 [Arabidopsis thaliana]
Length = 617
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 131/240 (54%), Gaps = 49/240 (20%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
+S D + EL L L+++ LG+K+PTPIQ ACIP A G+ D+ +A TGSGKT
Sbjct: 100 VSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLAL-TGR-DLCASAITGSGKTA 157
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKE 285
AF LP ++RLL + PK R LI+TPTRELA+Q+ ++
Sbjct: 158 AFALPTLERLL-------------------FRPKRVFATRVLILTPTRELAVQIHSMIQN 198
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+A+ +++ IVGG+S +QE +L++ P++VV TPGR+ + + V+L L+ +
Sbjct: 199 LAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLI 256
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
LDEADR+++ G E+ ++ + P K+RQT++FSAT+
Sbjct: 257 LDEADRLLQTGFATEITELVRLCP------------------------KRRQTMLFSATM 292
>gi|329121361|ref|ZP_08249987.1| RNA helicase DeaD [Dialister micraerophilus DSM 19965]
gi|327469770|gb|EGF15236.1| RNA helicase DeaD [Dialister micraerophilus DSM 19965]
Length = 497
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 49/234 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
++ + EL L +MK++ +GF+EP+PIQK +P A QGK D+IG A+TG+GKT AFG+
Sbjct: 8 YETFKELGLSEEIMKAVADMGFEEPSPIQKEAVPIAM-QGK-DLIGQAQTGTGKTAAFGI 65
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
PI+QR+ + K P+ A++++PTRELA+Q + + +A+ +N
Sbjct: 66 PILQRI----------------DTSKPGPQ----AIVLSPTRELAIQSAEEINHLAQYMN 105
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
++ +PI GG E+Q R LK + ++V TPGRL + M ++ ++L + VLDE D
Sbjct: 106 IKTIPIYGGQDIERQFRALKKKTNIIVATPGRLMDHM---KRKTIDLSNVQIAVLDEGDE 162
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G ++++I+ P K+RQTL FSAT+
Sbjct: 163 MVDMGFIDDIRTIMAATP------------------------KERQTLFFSATM 192
>gi|195032613|ref|XP_001988529.1| GH11216 [Drosophila grimshawi]
gi|193904529|gb|EDW03396.1| GH11216 [Drosophila grimshawi]
Length = 864
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 144/239 (60%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +WNE P +++ I +G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 431 IPNPIRSWNESGFPPEIIEIIDTVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 488
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 489 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GP----YAIIMAPTRELAQQIEEETIKFG 537
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 538 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 594
Query: 348 EADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 595 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDEKKLMENFYTKKKYRQTVMFTATM 653
>gi|195344854|ref|XP_002038991.1| GM17282 [Drosophila sechellia]
gi|194134121|gb|EDW55637.1| GM17282 [Drosophila sechellia]
Length = 822
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 144/239 (60%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +WNE ++ I ++G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 389 IPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 446
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 447 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFG 495
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 496 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 552
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F+AT+
Sbjct: 553 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYSKKKYRQTVMFTATM 611
>gi|157121045|ref|XP_001653747.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882993|gb|EAT47218.1| AAEL001657-PA [Aedes aegypti]
Length = 814
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 141/239 (58%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I F +W+E ++ I ++G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 381 IPNPFRSWSETGFPKEILDIIDKVGYKEPTPIQRQAIPIGLQNR--DIIGIAETGSGKTL 438
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ ++ K ++ E P A+I+ PTRELA Q+ + ++
Sbjct: 439 AFLIPLLT-WIQSLPKIDRL------ETADQGP----YAIILAPTRELAQQIEEETQKFG 487
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 488 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 544
Query: 348 EADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 545 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDASKLMENFNTKKKYRQTVMFTATM 603
>gi|358053682|ref|ZP_09147418.1| putative helicase [Staphylococcus simiae CCM 7213]
gi|357256869|gb|EHJ07190.1| putative helicase [Staphylococcus simiae CCM 7213]
Length = 507
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 131/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGVSDNTVQTLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G NV+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQNVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P ++RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIPA-----------------------QQRQTMLFSATM 185
>gi|257899462|ref|ZP_05679115.1| helicase [Enterococcus faecium Com15]
gi|293573030|ref|ZP_06683972.1| cold-shock deAd box protein a [Enterococcus faecium E980]
gi|430842364|ref|ZP_19460279.1| DEAD/DEAH box helicase [Enterococcus faecium E1007]
gi|431081588|ref|ZP_19495678.1| DEAD/DEAH box helicase [Enterococcus faecium E1604]
gi|431118220|ref|ZP_19498174.1| DEAD/DEAH box helicase [Enterococcus faecium E1613]
gi|431592214|ref|ZP_19521450.1| DEAD/DEAH box helicase [Enterococcus faecium E1861]
gi|431738949|ref|ZP_19527889.1| DEAD/DEAH box helicase [Enterococcus faecium E1972]
gi|431740772|ref|ZP_19529683.1| DEAD/DEAH box helicase [Enterococcus faecium E2039]
gi|257837374|gb|EEV62448.1| helicase [Enterococcus faecium Com15]
gi|291606932|gb|EFF36312.1| cold-shock deAd box protein a [Enterococcus faecium E980]
gi|430493445|gb|ELA69748.1| DEAD/DEAH box helicase [Enterococcus faecium E1007]
gi|430565520|gb|ELB04666.1| DEAD/DEAH box helicase [Enterococcus faecium E1604]
gi|430568177|gb|ELB07234.1| DEAD/DEAH box helicase [Enterococcus faecium E1613]
gi|430591839|gb|ELB29866.1| DEAD/DEAH box helicase [Enterococcus faecium E1861]
gi|430596492|gb|ELB34316.1| DEAD/DEAH box helicase [Enterococcus faecium E1972]
gi|430602855|gb|ELB40405.1| DEAD/DEAH box helicase [Enterococcus faecium E2039]
Length = 503
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 54/260 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-AGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++ II +P ++RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVP------------------------EQRQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLKQSVNGL 429
F K H +K K+ L
Sbjct: 194 KFMKSPHHVKIKAKEMTADL 213
>gi|431208676|ref|ZP_19500889.1| DEAD/DEAH box helicase [Enterococcus faecium E1620]
gi|430570682|gb|ELB09622.1| DEAD/DEAH box helicase [Enterococcus faecium E1620]
Length = 503
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 134/260 (51%), Gaps = 54/260 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLKQSVNGL 429
F K H +K K+ L
Sbjct: 194 KFMKNPHHVKIKAKEMTADL 213
>gi|321458546|gb|EFX69612.1| hypothetical protein DAPPUDRAFT_300875 [Daphnia pulex]
Length = 621
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 115/189 (60%), Gaps = 21/189 (11%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
LRALIITPTRELA+Q+ HLK VAK ++ + ++GGM+ KQER+L P++V+GTPGR
Sbjct: 195 LRALIITPTRELAVQIEKHLKAVAKYTDISICLVIGGMAAPKQERILSKGPDIVIGTPGR 254
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
LWE++ GG HL ++ + + LDE DR++E GHF E++++++ + N E
Sbjct: 255 LWEMIEGGNSHLSQIKDIRYLALDETDRLLEKGHFAEVRTLLEHI---NKDEE------- 304
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
+++ RQ VFSAT+ L+ D +L G+LK K+ + ++ L G+R
Sbjct: 305 --------KKRWRQNFVFSATLTLAHDLPNRL--GNLKSKKKKEAMK-LDKLLSLVGVRP 353
Query: 444 NVAIVDLTN 452
+VDLT
Sbjct: 354 KAKVVDLTT 362
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
EI+ + W + L ++++++ LGF+ PT IQ AC+P A +G+ DI+GAAETGSGKT
Sbjct: 33 EITPDMIIWKAMYLPDPIVRAVWELGFQTPTAIQLACLPTAM-KGRKDIVGAAETGSGKT 91
Query: 227 LAFGLPIMQRLLEEREKAGKMLEE 250
LAFG+PI+ +L+++E K L++
Sbjct: 92 LAFGIPILNGILKDKEFELKKLKQ 115
>gi|254578440|ref|XP_002495206.1| ZYRO0B05852p [Zygosaccharomyces rouxii]
gi|238938096|emb|CAR26273.1| ZYRO0B05852p [Zygosaccharomyces rouxii]
Length = 751
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 51/323 (15%)
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPL---LMKSIYRLGFKEPTPIQKACIPAAAHQG 211
P+ EL E S E W ++ PL ++ + + GF +PT IQK +P A
Sbjct: 166 PNVFNSELNLEDFSSPELPEWQ--KIAPLSFTVLNGLSQQGFTKPTDIQKEVLPLALKNE 223
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 271
DI+G A TGSGKTLA+G+P+++ L+ E + + + LI TP
Sbjct: 224 --DIMGKAATGSGKTLAYGIPLLESLVHEPDHSKSI------------------GLIFTP 263
Query: 272 TRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLKAR--PELVVGTPGRLW 325
TRELA QVT HLK++ + I ++P+ GG+S +KQER+LK +VV TPGR
Sbjct: 264 TRELAQQVTQHLKKLGQLIIQKSKFAILPLTGGLSIQKQERILKYENSARIVVATPGRFL 323
Query: 326 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTC 385
EL+ + ++ VLDEADR++++GHF E + I+ +L G+ +
Sbjct: 324 ELIEKNIDLIPRFARINTLVLDEADRLLQDGHFDEFEKILKLL---GGARK--------- 371
Query: 386 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK-LKQSVNGLNSI-ETLSERAGMRA 443
S + QT++FSAT +LS KL S K LK+ + + + + L ++ ++
Sbjct: 372 ----SFDKTGWQTMIFSATFSLS--LFSKLATASWKSLKKDEDEMEQVLKHLMQKIRFKS 425
Query: 444 NVAIVDLTNVSVLANKLEESFIE 466
IVD + + +++ ES IE
Sbjct: 426 KPVIVDTNSEEKIKSQIRESLIE 448
>gi|257885750|ref|ZP_05665403.1| helicase [Enterococcus faecium 1,231,501]
gi|257821606|gb|EEV48736.1| helicase [Enterococcus faecium 1,231,501]
Length = 503
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 133/255 (52%), Gaps = 54/255 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLKQ 424
F K H +K K+
Sbjct: 194 KFMKNPHHVKIKAKE 208
>gi|257870943|ref|ZP_05650596.1| helicase [Enterococcus gallinarum EG2]
gi|357051322|ref|ZP_09112516.1| hypothetical protein HMPREF9478_02499 [Enterococcus saccharolyticus
30_1]
gi|257805107|gb|EEV33929.1| helicase [Enterococcus gallinarum EG2]
gi|355380144|gb|EHG27289.1| hypothetical protein HMPREF9478_02499 [Enterococcus saccharolyticus
30_1]
Length = 502
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 135/256 (52%), Gaps = 56/256 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L L+ S+ R GF+E TPIQ+A IP A QG+ D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKDLELSNELLTSVERAGFEEATPIQEATIPLAL-QGR-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
EK P H L+ L+I PTRELA+Q + L + K +R
Sbjct: 61 ---------------------EKIDPANHQLQGLVIAPTRELAIQTQEELYRLGKDKKIR 99
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V + GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 100 VQAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVETLVLDEADEML 156
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALS 408
G +++ II +P ++RQTL+FSAT+ ++
Sbjct: 157 NMGFLEDIEKIISQVP------------------------EERQTLLFSATMPPAIKSIG 192
Query: 409 ADFRKKLKHGSLKLKQ 424
F K +H +K K+
Sbjct: 193 VKFMKNPEHVQIKAKE 208
>gi|260558407|ref|ZP_05830603.1| helicase [Enterococcus faecium C68]
gi|261207113|ref|ZP_05921802.1| helicase [Enterococcus faecium TC 6]
gi|289567232|ref|ZP_06447617.1| ATP-dependent RNA helicase exp9 [Enterococcus faecium D344SRF]
gi|293556891|ref|ZP_06675452.1| ATP-dependent RNA helicase [Enterococcus faecium E1039]
gi|293567807|ref|ZP_06679148.1| cold-shock deAd box protein a [Enterococcus faecium E1071]
gi|294615128|ref|ZP_06695014.1| Putative ATP-dependent RNA helicase [Enterococcus faecium E1636]
gi|294617803|ref|ZP_06697416.1| ATP-dependent RNA helicase [Enterococcus faecium E1679]
gi|406579294|ref|ZP_11054526.1| DEAD/DEAH box helicase [Enterococcus sp. GMD4E]
gi|406581588|ref|ZP_11056725.1| DEAD/DEAH box helicase [Enterococcus sp. GMD3E]
gi|406584027|ref|ZP_11059065.1| DEAD/DEAH box helicase [Enterococcus sp. GMD2E]
gi|406589825|ref|ZP_11064245.1| DEAD/DEAH box helicase [Enterococcus sp. GMD1E]
gi|410938072|ref|ZP_11369930.1| DEAD/DEAH box helicase [Enterococcus sp. GMD5E]
gi|424789110|ref|ZP_18215819.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
V689]
gi|424953765|ref|ZP_18368708.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R494]
gi|424962400|ref|ZP_18376756.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1986]
gi|424963599|ref|ZP_18377803.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1190]
gi|424970725|ref|ZP_18384213.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1139]
gi|424978089|ref|ZP_18391038.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1123]
gi|425038208|ref|ZP_18442830.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 513]
gi|425058609|ref|ZP_18461987.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 504]
gi|425060636|ref|ZP_18463922.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 503]
gi|427397059|ref|ZP_18889685.1| hypothetical protein HMPREF9307_01861 [Enterococcus durans
FB129-CNAB-4]
gi|430820898|ref|ZP_19439518.1| DEAD/DEAH box helicase [Enterococcus faecium E0045]
gi|430823396|ref|ZP_19441967.1| DEAD/DEAH box helicase [Enterococcus faecium E0120]
gi|430826317|ref|ZP_19444503.1| DEAD/DEAH box helicase [Enterococcus faecium E0164]
gi|430828899|ref|ZP_19447010.1| DEAD/DEAH box helicase [Enterococcus faecium E0269]
gi|430834757|ref|ZP_19452759.1| DEAD/DEAH box helicase [Enterococcus faecium E0679]
gi|430836494|ref|ZP_19454473.1| DEAD/DEAH box helicase [Enterococcus faecium E0680]
gi|430839412|ref|ZP_19457353.1| DEAD/DEAH box helicase [Enterococcus faecium E0688]
gi|430843175|ref|ZP_19461076.1| DEAD/DEAH box helicase [Enterococcus faecium E1050]
gi|430850821|ref|ZP_19468578.1| DEAD/DEAH box helicase [Enterococcus faecium E1185]
gi|430853175|ref|ZP_19470905.1| DEAD/DEAH box helicase [Enterococcus faecium E1258]
gi|430858894|ref|ZP_19476513.1| DEAD/DEAH box helicase [Enterococcus faecium E1552]
gi|430861435|ref|ZP_19478942.1| DEAD/DEAH box helicase [Enterococcus faecium E1573]
gi|430866428|ref|ZP_19481705.1| DEAD/DEAH box helicase [Enterococcus faecium E1574]
gi|430892938|ref|ZP_19484559.1| DEAD/DEAH box helicase [Enterococcus faecium E1575]
gi|430952632|ref|ZP_19486438.1| DEAD/DEAH box helicase [Enterococcus faecium E1576]
gi|431000766|ref|ZP_19488247.1| DEAD/DEAH box helicase [Enterococcus faecium E1578]
gi|431234137|ref|ZP_19502906.1| DEAD/DEAH box helicase [Enterococcus faecium E1622]
gi|431256501|ref|ZP_19504856.1| DEAD/DEAH box helicase [Enterococcus faecium E1623]
gi|431303424|ref|ZP_19508271.1| DEAD/DEAH box helicase [Enterococcus faecium E1626]
gi|431380394|ref|ZP_19510775.1| DEAD/DEAH box helicase [Enterococcus faecium E1627]
gi|431441111|ref|ZP_19513326.1| DEAD/DEAH box helicase [Enterococcus faecium E1630]
gi|431506774|ref|ZP_19515600.1| DEAD/DEAH box helicase [Enterococcus faecium E1634]
gi|431725207|ref|ZP_19525416.1| DEAD/DEAH box helicase [Enterococcus faecium E1904]
gi|431744090|ref|ZP_19532962.1| DEAD/DEAH box helicase [Enterococcus faecium E2071]
gi|431747114|ref|ZP_19535916.1| DEAD/DEAH box helicase [Enterococcus faecium E2134]
gi|431760196|ref|ZP_19548798.1| DEAD/DEAH box helicase [Enterococcus faecium E3346]
gi|431765027|ref|ZP_19553551.1| DEAD/DEAH box helicase [Enterococcus faecium E4215]
gi|260075581|gb|EEW63887.1| helicase [Enterococcus faecium C68]
gi|260078741|gb|EEW66443.1| helicase [Enterococcus faecium TC 6]
gi|289160980|gb|EFD08895.1| ATP-dependent RNA helicase exp9 [Enterococcus faecium D344SRF]
gi|291589392|gb|EFF21199.1| cold-shock deAd box protein a [Enterococcus faecium E1071]
gi|291592070|gb|EFF23693.1| Putative ATP-dependent RNA helicase [Enterococcus faecium E1636]
gi|291595943|gb|EFF27223.1| ATP-dependent RNA helicase [Enterococcus faecium E1679]
gi|291600975|gb|EFF31266.1| ATP-dependent RNA helicase [Enterococcus faecium E1039]
gi|402922578|gb|EJX42943.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
V689]
gi|402938304|gb|EJX57320.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R494]
gi|402940682|gb|EJX59477.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1986]
gi|402948694|gb|EJX66809.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1190]
gi|402960765|gb|EJX77866.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1139]
gi|402963120|gb|EJX80012.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1123]
gi|403019904|gb|EJY32478.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 513]
gi|403038013|gb|EJY49253.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 504]
gi|403042418|gb|EJY53373.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 503]
gi|404455599|gb|EKA02443.1| DEAD/DEAH box helicase [Enterococcus sp. GMD4E]
gi|404459354|gb|EKA05720.1| DEAD/DEAH box helicase [Enterococcus sp. GMD3E]
gi|404464924|gb|EKA10437.1| DEAD/DEAH box helicase [Enterococcus sp. GMD2E]
gi|404470265|gb|EKA14916.1| DEAD/DEAH box helicase [Enterococcus sp. GMD1E]
gi|410733711|gb|EKQ75634.1| DEAD/DEAH box helicase [Enterococcus sp. GMD5E]
gi|425722385|gb|EKU85280.1| hypothetical protein HMPREF9307_01861 [Enterococcus durans
FB129-CNAB-4]
gi|430439035|gb|ELA49418.1| DEAD/DEAH box helicase [Enterococcus faecium E0045]
gi|430442109|gb|ELA52157.1| DEAD/DEAH box helicase [Enterococcus faecium E0120]
gi|430445197|gb|ELA54971.1| DEAD/DEAH box helicase [Enterococcus faecium E0164]
gi|430482561|gb|ELA59676.1| DEAD/DEAH box helicase [Enterococcus faecium E0269]
gi|430484826|gb|ELA61773.1| DEAD/DEAH box helicase [Enterococcus faecium E0679]
gi|430488294|gb|ELA64976.1| DEAD/DEAH box helicase [Enterococcus faecium E0680]
gi|430490870|gb|ELA67366.1| DEAD/DEAH box helicase [Enterococcus faecium E0688]
gi|430497924|gb|ELA73941.1| DEAD/DEAH box helicase [Enterococcus faecium E1050]
gi|430535180|gb|ELA75603.1| DEAD/DEAH box helicase [Enterococcus faecium E1185]
gi|430540997|gb|ELA81174.1| DEAD/DEAH box helicase [Enterococcus faecium E1258]
gi|430544740|gb|ELA84762.1| DEAD/DEAH box helicase [Enterococcus faecium E1552]
gi|430549900|gb|ELA89710.1| DEAD/DEAH box helicase [Enterococcus faecium E1573]
gi|430551656|gb|ELA91407.1| DEAD/DEAH box helicase [Enterococcus faecium E1574]
gi|430555404|gb|ELA94942.1| DEAD/DEAH box helicase [Enterococcus faecium E1575]
gi|430557231|gb|ELA96699.1| DEAD/DEAH box helicase [Enterococcus faecium E1576]
gi|430562425|gb|ELB01657.1| DEAD/DEAH box helicase [Enterococcus faecium E1578]
gi|430573163|gb|ELB11993.1| DEAD/DEAH box helicase [Enterococcus faecium E1622]
gi|430577603|gb|ELB16190.1| DEAD/DEAH box helicase [Enterococcus faecium E1623]
gi|430580065|gb|ELB18545.1| DEAD/DEAH box helicase [Enterococcus faecium E1626]
gi|430582262|gb|ELB20689.1| DEAD/DEAH box helicase [Enterococcus faecium E1627]
gi|430586467|gb|ELB24719.1| DEAD/DEAH box helicase [Enterococcus faecium E1630]
gi|430587161|gb|ELB25394.1| DEAD/DEAH box helicase [Enterococcus faecium E1634]
gi|430595854|gb|ELB33732.1| DEAD/DEAH box helicase [Enterococcus faecium E1904]
gi|430605718|gb|ELB43100.1| DEAD/DEAH box helicase [Enterococcus faecium E2071]
gi|430607222|gb|ELB44549.1| DEAD/DEAH box helicase [Enterococcus faecium E2134]
gi|430624005|gb|ELB60656.1| DEAD/DEAH box helicase [Enterococcus faecium E3346]
gi|430629510|gb|ELB65910.1| DEAD/DEAH box helicase [Enterococcus faecium E4215]
Length = 503
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 134/260 (51%), Gaps = 54/260 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLKQSVNGL 429
F K H +K K+ L
Sbjct: 194 KFMKNPHHVKIKAKEMTADL 213
>gi|308068476|ref|YP_003870081.1| RNA helicase exp9 (Exported protein 9) [Paenibacillus polymyxa
E681]
gi|305857755|gb|ADM69543.1| Probable RNA helicase exp9 (Exported protein 9) [Paenibacillus
polymyxa E681]
Length = 529
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 141/255 (55%), Gaps = 54/255 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E L P ++++I LGF+E TPIQ IP A QG+ D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQSQSIPIAL-QGR-DMIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ EK +RALI+ PTRELA+QV + ++++++ +R
Sbjct: 62 NKISRSDEK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRT 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 102 LPIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 159 MGFMEDIQSILKQVP------------------------DERQTMLFSATMPANIKRLAE 194
Query: 410 DFRKKLKHGSLKLKQ 424
F K +H S+ KQ
Sbjct: 195 QFLKNPEHVSVIPKQ 209
>gi|340751823|ref|ZP_08688633.1| ATP-dependent RNA helicase [Fusobacterium mortiferum ATCC 9817]
gi|229420786|gb|EEO35833.1| ATP-dependent RNA helicase [Fusobacterium mortiferum ATCC 9817]
Length = 545
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 114/192 (59%), Gaps = 25/192 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L +K++ + G+++PTPIQ IPA + G DIIG A+TG+GKT AF LPI+
Sbjct: 7 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLN-GDKDIIGQAQTGTGKTAAFSLPIL 65
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + P ++A+++ PTRELALQV + + +A G +R+
Sbjct: 66 ---------------------ENFEPSKVIQAIVLAPTRELALQVAEEMNSLAHGKKIRI 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
P+ GG S E Q R LK +++VGTPGR+ +LM E+ L++L L +F+LDEAD M+
Sbjct: 105 TPVYGGQSIEFQIRQLKKGTDIIVGTPGRVIDLM---ERKLIKLQDLKYFILDEADEMLN 161
Query: 355 NGHFRELQSIID 366
G +++ I++
Sbjct: 162 MGFVEDIEKILE 173
>gi|24584994|ref|NP_609888.2| CG10333 [Drosophila melanogaster]
gi|22946759|gb|AAF53680.2| CG10333 [Drosophila melanogaster]
gi|60677727|gb|AAX33370.1| RH55640p [Drosophila melanogaster]
Length = 822
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 144/239 (60%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +WNE ++ I ++G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 389 IPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 446
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 447 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFG 495
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 496 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 552
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F+AT+
Sbjct: 553 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATM 611
>gi|386332888|ref|YP_006029057.1| atp-dependent rna helicase protein [Ralstonia solanacearum Po82]
gi|334195335|gb|AEG68520.1| atp-dependent rna helicase protein [Ralstonia solanacearum Po82]
Length = 495
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 133/259 (51%), Gaps = 49/259 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
S FD + LHP +++++ G+ PTPIQ A IP G D++GAA+TG+GKT
Sbjct: 14 SVTFDTFG---LHPDILRALTESGYTRPTPIQAAAIPVVV--GGRDVMGAAQTGTGKTAG 68
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVA 287
F LPI+Q LL E + +P H +RALI+TPTRELA QV D++ + A
Sbjct: 69 FSLPIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYA 115
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K +R + GG+ Q L+ E++V TPGRL + + ++ V L + VLD
Sbjct: 116 KYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLD 172
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 173 EADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSP 208
Query: 408 SADFRKKLKHGSLKLKQSV 426
KKL L+ Q++
Sbjct: 209 EI---KKLAASYLRHPQTI 224
>gi|300703503|ref|YP_003745105.1| ATP-dependent RNA helicase, dead-box family [Ralstonia solanacearum
CFBP2957]
gi|299071166|emb|CBJ42480.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
CFBP2957]
Length = 495
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 133/259 (51%), Gaps = 49/259 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
S FD + LHP +++++ G+ PTPIQ A IP G D++GAA+TG+GKT
Sbjct: 14 SVTFDTFG---LHPDILRALTESGYTRPTPIQAAAIPVVV--GGRDVMGAAQTGTGKTAG 68
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVA 287
F LPI+Q LL E + +P H +RALI+TPTRELA QV D++ + A
Sbjct: 69 FSLPIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYA 115
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K +R + GG+ Q L+ E++V TPGRL + + ++ V L + VLD
Sbjct: 116 KYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLD 172
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 173 EADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSP 208
Query: 408 SADFRKKLKHGSLKLKQSV 426
KKL L+ Q++
Sbjct: 209 EI---KKLAASYLRHPQTI 224
>gi|207743814|ref|YP_002260206.1| atp-dependent rna helicase protein [Ralstonia solanacearum IPO1609]
gi|421897757|ref|ZP_16328124.1| atp-dependent rna helicase protein [Ralstonia solanacearum MolK2]
gi|206588963|emb|CAQ35925.1| atp-dependent rna helicase protein [Ralstonia solanacearum MolK2]
gi|206595214|emb|CAQ62141.1| atp-dependent rna helicase protein [Ralstonia solanacearum IPO1609]
Length = 495
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 133/259 (51%), Gaps = 49/259 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
S FD + LHP +++++ G+ PTPIQ A IP G D++GAA+TG+GKT
Sbjct: 14 SVTFDTFG---LHPDILRALTESGYTRPTPIQAAAIPVVV--GGRDVMGAAQTGTGKTAG 68
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVA 287
F LPI+Q LL E + +P H +RALI+TPTRELA QV D++ + A
Sbjct: 69 FSLPIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYA 115
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K +R + GG+ Q L+ E++V TPGRL + + ++ V L + VLD
Sbjct: 116 KYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLD 172
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 173 EADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSP 208
Query: 408 SADFRKKLKHGSLKLKQSV 426
KKL L+ Q++
Sbjct: 209 EI---KKLAASYLRHPQTI 224
>gi|425055862|ref|ZP_18459326.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 505]
gi|403033019|gb|EJY44552.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 505]
Length = 503
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 134/260 (51%), Gaps = 54/260 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-AGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLKQSVNGL 429
F K H +K K+ L
Sbjct: 194 KFMKSPHHVKIKAKEMTADL 213
>gi|332016384|gb|EGI57297.1| Putative ATP-dependent RNA helicase DDX49 [Acromyrmex echinatior]
Length = 461
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 142/276 (51%), Gaps = 52/276 (18%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
+ +S E +++L+L+ L+ +G K+PTPIQ+ CIP G+ D IG A+TGSGK
Sbjct: 4 SNMSKEIKHFSDLKLNSWLLAQCESMGLKKPTPIQQNCIPRIL-MGE-DCIGCAKTGSGK 61
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
TLAF LPI+Q+L E+ P G + AL++TPTRELA Q+ D
Sbjct: 62 TLAFVLPILQKLCED-------------------PYG-IFALVLTPTRELAFQIADQFTA 101
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+ K IN++ IVGGM Q L RP +VV TPGRL + + + L + F V
Sbjct: 102 IGKAINLKKCVIVGGMDMMVQGLELSKRPHIVVATPGRLADHLDSCDTF--SLQKIKFLV 159
Query: 346 LDEADRMIENGHFR-ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
LDEADR++ GHF +L++I LP K++Q L FSAT
Sbjct: 160 LDEADRLL-GGHFDGQLKTIFAALP------------------------KQKQVLFFSAT 194
Query: 405 IALSADFRKKLKHGSLKLKQSVN--GLNSIETLSER 438
+ + D K++ + Q + G+ +++ L +R
Sbjct: 195 MTDTLDKVKQIASAEVFTWQEEDDFGIATVKELDQR 230
>gi|302036818|ref|YP_003797140.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
gi|190343232|gb|ACE75620.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
gi|300604882|emb|CBK41215.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
Length = 431
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 48/237 (20%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
+T F +++ L + P L++++ + GF EPT IQ IP A G+ D++G A+TG+GKT A
Sbjct: 3 TTAFTSFDSLGVSPTLLRNLTKAGFAEPTAIQAQAIPHAL-AGR-DVLGCAQTGTGKTAA 60
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 288
F +P+++RL PKG RALI+ PTRELA+Q+ + + +
Sbjct: 61 FVIPMLERL-------------------SGTPKGQPRALILAPTRELAIQIQATIDTLGR 101
Query: 289 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
+ + +VGG + Q R L+ RP+++V TPGRL + M G + L +S VLDE
Sbjct: 102 DLQLFATTVVGGADMQAQVRGLRQRPDIIVATPGRLLDHMWNGT---ISLLAMSILVLDE 158
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
ADRM++ G +++ I+D +P ++RQTL+FSAT+
Sbjct: 159 ADRMLDMGFAQQINQILDAMP------------------------EERQTLLFSATM 191
>gi|424869804|ref|ZP_18293485.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R497]
gi|402935190|gb|EJX54460.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R497]
Length = 501
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 134/260 (51%), Gaps = 54/260 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLKQSVNGL 429
F K H +K K+ L
Sbjct: 194 KFMKNPHHVKIKAKEMTADL 213
>gi|69248308|ref|ZP_00604710.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Enterococcus faecium DO]
gi|257878842|ref|ZP_05658495.1| helicase [Enterococcus faecium 1,230,933]
gi|257881478|ref|ZP_05661131.1| helicase [Enterococcus faecium 1,231,502]
gi|257890700|ref|ZP_05670353.1| helicase [Enterococcus faecium 1,231,410]
gi|293560261|ref|ZP_06676758.1| cold-shock deAd box protein a [Enterococcus faecium E1162]
gi|294621795|ref|ZP_06700954.1| ATP-dependent RNA helicase [Enterococcus faecium U0317]
gi|314938932|ref|ZP_07846197.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a04]
gi|314943517|ref|ZP_07850284.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133C]
gi|314948188|ref|ZP_07851582.1| DEAD/DEAH box helicase [Enterococcus faecium TX0082]
gi|314951548|ref|ZP_07854594.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133A]
gi|314991589|ref|ZP_07857065.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133B]
gi|314994922|ref|ZP_07860049.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a01]
gi|383327538|ref|YP_005353422.1| DEAD/DEAH box helicase [Enterococcus faecium Aus0004]
gi|389867363|ref|YP_006374786.1| DEAD/DEAH box helicase [Enterococcus faecium DO]
gi|415892439|ref|ZP_11549927.1| cold-shock deAd box protein a [Enterococcus faecium E4453]
gi|416131873|ref|ZP_11597781.1| cold-shock deAd box protein a [Enterococcus faecium E4452]
gi|424795449|ref|ZP_18221304.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
S447]
gi|424819380|ref|ZP_18244487.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R501]
gi|424856321|ref|ZP_18280560.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R499]
gi|424949231|ref|ZP_18364921.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R496]
gi|424956289|ref|ZP_18371077.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R446]
gi|424967919|ref|ZP_18381589.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1140]
gi|424976047|ref|ZP_18389165.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1137]
gi|424981969|ref|ZP_18394659.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV99]
gi|424984734|ref|ZP_18397253.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV69]
gi|424987723|ref|ZP_18400084.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV38]
gi|424990961|ref|ZP_18403147.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV26]
gi|424995504|ref|ZP_18407380.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV168]
gi|424997413|ref|ZP_18409175.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV165]
gi|425000503|ref|ZP_18412062.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV161]
gi|425003235|ref|ZP_18414612.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV102]
gi|425006604|ref|ZP_18417774.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV1]
gi|425011167|ref|ZP_18422079.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E422]
gi|425013771|ref|ZP_18424487.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E417]
gi|425017560|ref|ZP_18428061.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C621]
gi|425022464|ref|ZP_18432645.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C497]
gi|425030171|ref|ZP_18435374.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C1904]
gi|425033448|ref|ZP_18438416.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 515]
gi|425034930|ref|ZP_18439786.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 514]
gi|425040930|ref|ZP_18445364.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 511]
gi|425044373|ref|ZP_18448536.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 510]
gi|425047569|ref|ZP_18451517.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 509]
gi|425053412|ref|ZP_18456957.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 506]
gi|430831942|ref|ZP_19449990.1| DEAD/DEAH box helicase [Enterococcus faecium E0333]
gi|430847435|ref|ZP_19465272.1| DEAD/DEAH box helicase [Enterococcus faecium E1133]
gi|430855628|ref|ZP_19473336.1| DEAD/DEAH box helicase [Enterococcus faecium E1392]
gi|431544298|ref|ZP_19518594.1| DEAD/DEAH box helicase [Enterococcus faecium E1731]
gi|431749300|ref|ZP_19538042.1| DEAD/DEAH box helicase [Enterococcus faecium E2297]
gi|431755816|ref|ZP_19544461.1| DEAD/DEAH box helicase [Enterococcus faecium E2883]
gi|431767952|ref|ZP_19556395.1| DEAD/DEAH box helicase [Enterococcus faecium E1321]
gi|431769544|ref|ZP_19557952.1| DEAD/DEAH box helicase [Enterococcus faecium E1644]
gi|431773402|ref|ZP_19561727.1| DEAD/DEAH box helicase [Enterococcus faecium E2369]
gi|431776500|ref|ZP_19564761.1| DEAD/DEAH box helicase [Enterococcus faecium E2560]
gi|431779582|ref|ZP_19567775.1| DEAD/DEAH box helicase [Enterococcus faecium E4389]
gi|431782613|ref|ZP_19570746.1| DEAD/DEAH box helicase [Enterococcus faecium E6012]
gi|431784440|ref|ZP_19572479.1| DEAD/DEAH box helicase [Enterococcus faecium E6045]
gi|68194452|gb|EAN08953.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Enterococcus faecium DO]
gi|257813070|gb|EEV41828.1| helicase [Enterococcus faecium 1,230,933]
gi|257817136|gb|EEV44464.1| helicase [Enterococcus faecium 1,231,502]
gi|257827060|gb|EEV53686.1| helicase [Enterococcus faecium 1,231,410]
gi|291598627|gb|EFF29685.1| ATP-dependent RNA helicase [Enterococcus faecium U0317]
gi|291605711|gb|EFF35148.1| cold-shock deAd box protein a [Enterococcus faecium E1162]
gi|313590904|gb|EFR69749.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a01]
gi|313593873|gb|EFR72718.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133B]
gi|313596242|gb|EFR75087.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133A]
gi|313597889|gb|EFR76734.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133C]
gi|313641641|gb|EFS06221.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a04]
gi|313645321|gb|EFS09901.1| DEAD/DEAH box helicase [Enterococcus faecium TX0082]
gi|364093335|gb|EHM35615.1| cold-shock deAd box protein a [Enterococcus faecium E4453]
gi|364093511|gb|EHM35776.1| cold-shock deAd box protein a [Enterococcus faecium E4452]
gi|378937232|gb|AFC62304.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecium Aus0004]
gi|388532612|gb|AFK57804.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium DO]
gi|402924387|gb|EJX44599.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
S447]
gi|402926241|gb|EJX46293.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R501]
gi|402930201|gb|EJX49880.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R499]
gi|402934931|gb|EJX54225.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R496]
gi|402946393|gb|EJX64674.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R446]
gi|402952005|gb|EJX69866.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1137]
gi|402953338|gb|EJX71063.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1140]
gi|402962168|gb|EJX79137.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV99]
gi|402967955|gb|EJX84466.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV69]
gi|402973745|gb|EJX89845.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV38]
gi|402977156|gb|EJX92995.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV168]
gi|402978215|gb|EJX93973.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV26]
gi|402986313|gb|EJY01444.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV165]
gi|402988977|gb|EJY03941.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV161]
gi|402992431|gb|EJY07139.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV102]
gi|402996952|gb|EJY11308.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV1]
gi|402997720|gb|EJY12029.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E422]
gi|403000335|gb|EJY14462.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E417]
gi|403002697|gb|EJY16644.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C497]
gi|403004081|gb|EJY17911.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C621]
gi|403004113|gb|EJY17941.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C1904]
gi|403009946|gb|EJY23359.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 515]
gi|403018997|gb|EJY31633.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 514]
gi|403027273|gb|EJY39167.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 511]
gi|403029941|gb|EJY41662.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 510]
gi|403030418|gb|EJY42102.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 506]
gi|403033364|gb|EJY44870.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 509]
gi|430480583|gb|ELA57757.1| DEAD/DEAH box helicase [Enterococcus faecium E0333]
gi|430537055|gb|ELA77408.1| DEAD/DEAH box helicase [Enterococcus faecium E1133]
gi|430546683|gb|ELA86626.1| DEAD/DEAH box helicase [Enterococcus faecium E1392]
gi|430592410|gb|ELB30425.1| DEAD/DEAH box helicase [Enterococcus faecium E1731]
gi|430611728|gb|ELB48804.1| DEAD/DEAH box helicase [Enterococcus faecium E2297]
gi|430616431|gb|ELB53345.1| DEAD/DEAH box helicase [Enterococcus faecium E2883]
gi|430630040|gb|ELB66417.1| DEAD/DEAH box helicase [Enterococcus faecium E1321]
gi|430636649|gb|ELB72713.1| DEAD/DEAH box helicase [Enterococcus faecium E2369]
gi|430636858|gb|ELB72912.1| DEAD/DEAH box helicase [Enterococcus faecium E1644]
gi|430640819|gb|ELB76647.1| DEAD/DEAH box helicase [Enterococcus faecium E2560]
gi|430641683|gb|ELB77478.1| DEAD/DEAH box helicase [Enterococcus faecium E4389]
gi|430647250|gb|ELB82698.1| DEAD/DEAH box helicase [Enterococcus faecium E6012]
gi|430649535|gb|ELB84911.1| DEAD/DEAH box helicase [Enterococcus faecium E6045]
Length = 503
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 134/260 (51%), Gaps = 54/260 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-AGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLKQSVNGL 429
F K H +K K+ L
Sbjct: 194 KFMKNPHHVKIKAKEMTADL 213
>gi|336406430|ref|ZP_08587085.1| hypothetical protein HMPREF0127_04398 [Bacteroides sp. 1_1_30]
gi|345509853|ref|ZP_08789440.1| hypothetical protein BSAG_03518 [Bacteroides sp. D1]
gi|335934634|gb|EGM96619.1| hypothetical protein HMPREF0127_04398 [Bacteroides sp. 1_1_30]
gi|345454658|gb|EEO51805.2| hypothetical protein BSAG_03518 [Bacteroides sp. D1]
Length = 382
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 136/243 (55%), Gaps = 46/243 (18%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
+S A+I+ F + EL + ++K+I G+ PTPIQ+ IP A K DI+G A+TG
Sbjct: 1 MSTAKIT--FMTFKELNITEPILKAIGEKGYTVPTPIQEKAIPPAL--AKRDILGCAQTG 56
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 282
+GKT +F +PI+Q L ++E A +G ++ALI+TPTRELALQ+++
Sbjct: 57 TGKTASFAIPIIQHLQLDKEAA----RRQG-----------IKALILTPTRELALQISEC 101
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
+ + +K +R I GG++ Q LL+ +++V TPGRL +LMS G H L T+
Sbjct: 102 IDDYSKHTRIRHGVIFGGVNQRPQVDLLRKGIDILVATPGRLLDLMSQGHIH---LDTIQ 158
Query: 343 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 402
+FVLDEADRM++ G +++ I+ LP K++QTL FS
Sbjct: 159 YFVLDEADRMLDMGFIHDIKRILPKLP------------------------KEKQTLFFS 194
Query: 403 ATI 405
AT+
Sbjct: 195 ATM 197
>gi|85860692|ref|YP_462894.1| ATP-dependent RNA helicase [Syntrophus aciditrophicus SB]
gi|85723783|gb|ABC78726.1| ATP-dependent RNA helicase [Syntrophus aciditrophicus SB]
Length = 423
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 134/253 (52%), Gaps = 53/253 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ + LHP + I LG+K PTPIQ IPA QG+ D++G A+TG+GKT AF LPI
Sbjct: 2 SFTQFNLHPQINAGIEALGYKTPTPIQMQSIPAII-QGR-DVMGLAQTGTGKTAAFALPI 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+QRL+ GKM+ RALI+ PTRELA Q+ + + E+++ ++
Sbjct: 60 LQRLMN---GPGKMV----------------RALIVAPTRELAEQINESINEMSRSTKLK 100
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V + GG+S Q L+ E++V PGRL +L++ G + +L + FVLDEADRM
Sbjct: 101 SVALYGGVSKNPQIEKLRQGAEIIVACPGRLLDLVAQG---VADLSGIEVFVLDEADRMF 157
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR- 412
+ G E++ I LP +KRQTL+FSAT + AD R
Sbjct: 158 DMGFLPEIRKITKQLP------------------------EKRQTLLFSAT--MPADIRS 191
Query: 413 --KKLKHGSLKLK 423
K + H L ++
Sbjct: 192 LAKDILHDPLTIR 204
>gi|225443496|ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 709
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 133/242 (54%), Gaps = 28/242 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
++I +W E +L P L+K++ R G+K P+PIQ A IP Q D+IG AETGSGK
Sbjct: 282 SKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQR--DVIGIAETGSGK 339
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 340 TAAFVLPMLTYI--------SRLPPISEENEAEGPY----AVVMAPTRELAQQIEDETVK 387
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
A + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ V
Sbjct: 388 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVV 444
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSA 403
LDEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSA
Sbjct: 445 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSA 495
Query: 404 TI 405
T+
Sbjct: 496 TM 497
>gi|145353647|ref|XP_001421118.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581354|gb|ABO99411.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 755
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 128/249 (51%), Gaps = 46/249 (18%)
Query: 159 EEELVSEAEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
E +V A+ T FDA ++EL L L ++ LG+K+PTPIQ A IP A G+ D+
Sbjct: 132 ERAVVKGAKGDTTFDAKAFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAM-TGR-DVC 189
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 276
G A TGSGKT AF LP ++R+L + P L++ PTRELA
Sbjct: 190 GRAVTGSGKTAAFMLPQLERMLHRGPR----------------PAAATHVLVLVPTRELA 233
Query: 277 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 336
+QV + +A+ +R V +VGG+S Q L+ RPE+VV TPGR+ + + H
Sbjct: 234 VQVHQMTESLAQFTTIRAVLVVGGLSANVQAAALRTRPEIVVATPGRVIDHVRN--THSF 291
Query: 337 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 396
L L+ +LDEADR++E G E++ I+ P KKR
Sbjct: 292 GLEDLATLILDEADRLLEMGFLEEIKEIVRQCP------------------------KKR 327
Query: 397 QTLVFSATI 405
QTL+FSAT+
Sbjct: 328 QTLLFSATL 336
>gi|297850038|ref|XP_002892900.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
lyrata]
gi|297338742|gb|EFH69159.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 131/250 (52%), Gaps = 50/250 (20%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 250
LG ++PTP+Q C+P G+ D++G A+TGSGKT AF LPI+ RL E+
Sbjct: 72 LGMRKPTPVQTHCVPKIL-AGR-DVLGLAQTGSGKTAAFALPILHRLAED---------- 119
Query: 251 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL 310
P G + AL++TPTRELA Q+ + K + +N+R IVGGM Q R L
Sbjct: 120 ---------PYG-VFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTRSL 169
Query: 311 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
+RP +V+ TPGR+ L+ F VLDEADR+++ G EL++I LP
Sbjct: 170 VSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLP- 228
Query: 371 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK--LKQSVNG 428
K RQTL+FSAT ++++ + L+H S K ++ G
Sbjct: 229 -----------------------KSRQTLLFSAT--MTSNLQTLLEHSSNKAYFYEAYEG 263
Query: 429 LNSIETLSER 438
L +++TL+++
Sbjct: 264 LKTVDTLTQQ 273
>gi|338535344|ref|YP_004668678.1| putative ATP-dependent RNA helicase RhlE [Myxococcus fulvus HW-1]
gi|337261440|gb|AEI67600.1| putative ATP-dependent RNA helicase RhlE [Myxococcus fulvus HW-1]
Length = 516
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 124/231 (53%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL+LH L++++ G+ PTPIQ+ IP A G+ D++G A+TG+GKT AF LPI+
Sbjct: 3 FDELQLHDTLLRAVKAEGYTTPTPIQQKAIPHAL-TGR-DVLGVAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRL + G +R L++TPTRELA QV D + KG+ +R
Sbjct: 61 QRLSAKAPAGGAR---------------PVRCLVLTPTRELAGQVGDSFQTYGKGLPLRH 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ Q + L+ +++V TPGRL +LM E+ V L +L FVLDEADRM++
Sbjct: 106 AVIFGGVGQNPQVQALRNGVDVLVATPGRLLDLM---EQGFVSLRSLEVFVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ +I LP KRQTL FSAT+
Sbjct: 163 MGFIHDVRRVIKALP------------------------PKRQTLFFSATL 189
>gi|424762589|ref|ZP_18190093.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
TX1337RF]
gi|431757804|ref|ZP_19546433.1| DEAD/DEAH box helicase [Enterococcus faecium E3083]
gi|402424479|gb|EJV56656.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
TX1337RF]
gi|430618309|gb|ELB55156.1| DEAD/DEAH box helicase [Enterococcus faecium E3083]
Length = 503
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 54/260 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-VGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++ II +P ++RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVP------------------------EQRQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLKQSVNGL 429
F K H +K K+ L
Sbjct: 194 KFMKSPHHVKIKAKEMTADL 213
>gi|83746502|ref|ZP_00943553.1| ATP-dependent RNA helicase [Ralstonia solanacearum UW551]
gi|83726833|gb|EAP73960.1| ATP-dependent RNA helicase [Ralstonia solanacearum UW551]
Length = 566
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 133/259 (51%), Gaps = 49/259 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
S FD + LHP +++++ G+ PTPIQ A IP G D++GAA+TG+GKT
Sbjct: 85 SVTFDTFG---LHPDILRALTESGYTRPTPIQAAAIPVVV--GGRDVMGAAQTGTGKTAG 139
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVA 287
F LPI+Q LL E + +P H +RALI+TPTRELA QV D++ + A
Sbjct: 140 FSLPIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYA 186
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K +R + GG+ Q L+ E++V TPGRL + + ++ V L + VLD
Sbjct: 187 KYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLD 243
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 244 EADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSP 279
Query: 408 SADFRKKLKHGSLKLKQSV 426
KKL L+ Q++
Sbjct: 280 EI---KKLAASYLRHPQTI 295
>gi|198427069|ref|XP_002129152.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
[Ciona intestinalis]
Length = 452
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 141/267 (52%), Gaps = 55/267 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L+ +++ + LGF +PTPIQ CIP QGK D G ++TGSGKT AF LP++
Sbjct: 7 FADLGLNEWIIQHLGNLGFNKPTPIQYNCIPPIL-QGK-DCFGCSKTGSGKTAAFALPVL 64
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q+L E+ P G + L++TPTRELA Q+++ + K IN+R
Sbjct: 65 QKLSED-------------------PYG-IFCLVLTPTRELAYQISEQFTLIGKPINIRT 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
IVGGM +Q L+ +P +V+ TPGRL +L+ E + + F VLDEADR+++
Sbjct: 105 SVIVGGMDIIQQAYELQKKPHIVIATPGRLADLLRSNE------NNVKFLVLDEADRLLD 158
Query: 355 --NGHF-RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 411
+G F +L I LP K+RQTL+FSAT+ + +
Sbjct: 159 KLDGDFTNDLNLIFSSLP------------------------KERQTLLFSATLTDTLNE 194
Query: 412 RKKLKHGSLKLKQSVNGLNSIETLSER 438
K+L S QS N +++++ L +R
Sbjct: 195 VKELSTKSPFFWQSDNKVSTVDNLDQR 221
>gi|15896262|ref|NP_349611.1| ATP-dependent RNA [Clostridium acetobutylicum ATCC 824]
gi|337738217|ref|YP_004637664.1| ATP-dependent RNA helicase [Clostridium acetobutylicum DSM 1731]
gi|384459728|ref|YP_005672148.1| ATP-dependent RNA helicase (superfamily II) [Clostridium
acetobutylicum EA 2018]
gi|15026068|gb|AAK80951.1|AE007798_3 ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis
ortholog [Clostridium acetobutylicum ATCC 824]
gi|325510417|gb|ADZ22053.1| ATP-dependent RNA helicase (superfamily II) [Clostridium
acetobutylicum EA 2018]
gi|336293434|gb|AEI34568.1| ATP-dependent RNA helicase [Clostridium acetobutylicum DSM 1731]
Length = 528
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 142/252 (56%), Gaps = 53/252 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++L+L+ ++K+I +GF+EP+ IQ IP D+IG A+TG+GKT+AFG PI+
Sbjct: 6 FSDLKLNSSVLKAIDDMGFEEPSKIQAEAIPVVIDG--YDMIGQAQTGTGKTVAFGAPII 63
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ + EK G ++A+I+TPTRELA+Q+TD L ++K VRV
Sbjct: 64 SKIKDIDEKEG------------------VQAIILTPTRELAIQITDELTRLSKYARVRV 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG S E+Q R +K +++V TPGR +M ++ V+L + F VLDEAD M++
Sbjct: 106 LPIYGGQSIERQMRAIKRGVDVIVATPGR---IMDHIKRKTVKLDKVKFLVLDEADEMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 409
G +++ II N S + RQT++FSAT+ L++
Sbjct: 163 MGFIDDIEGII-----KNISGD-------------------RQTMLFSATMPAPIKKLAS 198
Query: 410 DFRKK-LKHGSL 420
++ KK +KH ++
Sbjct: 199 NYMKKEVKHIAI 210
>gi|421891297|ref|ZP_16322106.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
K60-1]
gi|378963340|emb|CCF98854.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
K60-1]
Length = 495
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 133/259 (51%), Gaps = 49/259 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
S FD + LHP +++++ G+ PTPIQ A IP G D++GAA+TG+GKT
Sbjct: 14 SVTFDTFG---LHPDILRALTESGYTRPTPIQAAAIPVVV--GGRDVMGAAQTGTGKTAG 68
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVA 287
F LPI+Q LL E + +P H +RALI+TPTRELA QV D++ + A
Sbjct: 69 FSLPIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYA 115
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K +R + GG+ Q L+ E++V TPGRL + + ++ V L + VLD
Sbjct: 116 KYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLD 172
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 173 EADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSP 208
Query: 408 SADFRKKLKHGSLKLKQSV 426
KKL L+ Q++
Sbjct: 209 EI---KKLAASYLRHPQTI 224
>gi|50284995|ref|XP_444926.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661507|sp|Q6FY67.1|MAK5_CANGA RecName: Full=ATP-dependent RNA helicase MAK5
gi|49524228|emb|CAG57819.1| unnamed protein product [Candida glabrata]
Length = 733
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 157/309 (50%), Gaps = 48/309 (15%)
Query: 169 STEFDAWNE-LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
S E W + + L + + LGF E TPIQK IPAA +GK DI+G A TGSGKTL
Sbjct: 150 SGELPGWTDTVDLSMTTINGLSNLGFTEMTPIQKLSIPAAL-EGK-DIMGKASTGSGKTL 207
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
A+G+PI++++++ ++ L G +I TPTRELA QVT HL+ V
Sbjct: 208 AYGIPIIEKMIKSKDN----LRTNG--------------IIFTPTRELAQQVTKHLQNVC 249
Query: 288 KGI----NVRVVPIVGGMSTEKQERLLK--ARPELVVGTPGRLWELMSGGEKHLVELHTL 341
+ ++ + GG+S +KQERLLK +VV TPGR EL+ E+ + +
Sbjct: 250 SMLLKKNPYMILSLTGGLSIQKQERLLKYDGSARIVVATPGRFLELIEKNEELMKRFAKI 309
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 401
VLDEADR++++GHF E + I+ L S + + QTL++
Sbjct: 310 DVLVLDEADRLLQDGHFDEFEKILKHLGRIRKSLKNM---------------EYWQTLIY 354
Query: 402 SATIALSADFRKKLKHGSLKLKQSVNGLNSIET----LSERAGMRANVAIVDLTNVSVLA 457
SAT S D KL + S K K + + +E+ L + ++ ++D ++
Sbjct: 355 SAT--FSTDLFDKLANSSWKKKNNSKDESEMESVLKHLMTKINFKSKPMMIDANPEDKIS 412
Query: 458 NKLEESFIE 466
+++ES IE
Sbjct: 413 AQIKESLIE 421
>gi|440798652|gb|ELR19719.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 906
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 143/253 (56%), Gaps = 27/253 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E +L +L+ +I G+K+P PIQ IP QG+ D+IG AETGSGKT AF LP++
Sbjct: 477 WGESKLPTVLLDAIESAGYKQPMPIQMQSIPIGL-QGR-DLIGLAETGSGKTCAFVLPML 534
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K M E + ALI+ PTRELALQ+ + A + R
Sbjct: 535 VYI----SKLPPMTAENAADGPY--------ALIMAPTRELALQIEQEAAKFASAMGFRT 582
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG S E+Q L+ E+++ TPGRL + + E+ V L+ ++ VLDEADRM++
Sbjct: 583 VAVVGGQSIEEQGFSLRRGAEILIATPGRLVDCL---EQRYVVLNQCNYVVLDEADRMVD 639
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-----RQTLVFSATIALSA 409
G ++ +I+D +P +N +E ++T +++LQ +K R T++FSAT+ ++
Sbjct: 640 MGFEVQVTTILDAMPSSNLKSE---DETTAEEQMAALQEEKPDHVYRTTVMFSATMPVAV 696
Query: 410 D--FRKKLKHGSL 420
+ RK L+H ++
Sbjct: 697 ERLARKYLRHPAV 709
>gi|145357256|ref|XP_001422836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583080|gb|ABP01195.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 710
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 128/249 (51%), Gaps = 46/249 (18%)
Query: 159 EEELVSEAEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
E +V A+ T FDA ++EL L L ++ LG+K+PTPIQ A IP A G+ D+
Sbjct: 132 ERAVVKGAKGDTTFDAKAFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAM-TGR-DVC 189
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 276
G A TGSGKT AF LP ++R+L + P L++ PTRELA
Sbjct: 190 GRAVTGSGKTAAFMLPQLERMLHRGPR----------------PAAATHVLVLVPTRELA 233
Query: 277 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 336
+QV + +A+ +R V +VGG+S Q L+ RPE+VV TPGR+ + + H
Sbjct: 234 VQVHQMTESLAQFTTIRAVLVVGGLSANVQAAALRTRPEIVVATPGRVIDHVRN--THSF 291
Query: 337 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 396
L L+ +LDEADR++E G E++ I+ P KKR
Sbjct: 292 GLEDLATLILDEADRLLEMGFLEEIKEIVRQCP------------------------KKR 327
Query: 397 QTLVFSATI 405
QTL+FSAT+
Sbjct: 328 QTLLFSATL 336
>gi|239637375|ref|ZP_04678357.1| cold-shock DEAD box protein A [Staphylococcus warneri L37603]
gi|239596975|gb|EEQ79490.1| cold-shock DEAD box protein A [Staphylococcus warneri L37603]
Length = 509
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 135/226 (59%), Gaps = 36/226 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLESMGFKEPTPIQKDSIPYAL-EGH-DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ GE+ +++LI+ PTRELA+QV + LK +KG NV+V
Sbjct: 62 EKVV-------------GEQG--------VQSLILAPTRELAMQVAEQLKVFSKGQNVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
G +++ I+D +P +EQ QT + S+ K QTLV
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQRQTML-FSATMPKAIQTLV 193
>gi|227550862|ref|ZP_03980911.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium
TX1330]
gi|257887886|ref|ZP_05667539.1| helicase [Enterococcus faecium 1,141,733]
gi|257893315|ref|ZP_05672968.1| helicase [Enterococcus faecium 1,231,408]
gi|293379275|ref|ZP_06625421.1| DEAD/DEAH box helicase [Enterococcus faecium PC4.1]
gi|431036552|ref|ZP_19492322.1| DEAD/DEAH box helicase [Enterococcus faecium E1590]
gi|431752972|ref|ZP_19541651.1| DEAD/DEAH box helicase [Enterococcus faecium E2620]
gi|431763081|ref|ZP_19551634.1| DEAD/DEAH box helicase [Enterococcus faecium E3548]
gi|227179960|gb|EEI60932.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium
TX1330]
gi|257823940|gb|EEV50872.1| helicase [Enterococcus faecium 1,141,733]
gi|257829694|gb|EEV56301.1| helicase [Enterococcus faecium 1,231,408]
gi|292642071|gb|EFF60235.1| DEAD/DEAH box helicase [Enterococcus faecium PC4.1]
gi|430563092|gb|ELB02323.1| DEAD/DEAH box helicase [Enterococcus faecium E1590]
gi|430612933|gb|ELB49957.1| DEAD/DEAH box helicase [Enterococcus faecium E2620]
gi|430622775|gb|ELB59485.1| DEAD/DEAH box helicase [Enterococcus faecium E3548]
Length = 503
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 134/260 (51%), Gaps = 54/260 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-VGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLKQSVNGL 429
F K H +K K+ L
Sbjct: 194 KFMKSPHHVKIKAKEMTADL 213
>gi|392988049|ref|YP_006486642.1| DEAD/DEAH box helicase [Enterococcus hirae ATCC 9790]
gi|392335469|gb|AFM69751.1| DEAD-box ATP dependent DNA helicase [Enterococcus hirae ATCC 9790]
Length = 503
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 134/255 (52%), Gaps = 54/255 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-SGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDTNRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKRVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVETLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++++II +P ++RQTL+FSAT+ +
Sbjct: 158 MGFLEDIENIISKVP------------------------EERQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLKQ 424
F K H +K K+
Sbjct: 194 KFMKSPTHVKIKAKE 208
>gi|417644460|ref|ZP_12294450.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus warneri
VCU121]
gi|330684829|gb|EGG96522.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU121]
Length = 509
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 134/228 (58%), Gaps = 40/228 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA--AHQGKVDIIGAAETGSGKTLAFGLP 232
+ EL + ++++ +GFKEPTPIQK IP A H DI+G A+TG+GKT AFG+P
Sbjct: 4 FKELGISDKTVQTLESMGFKEPTPIQKDSIPYALEGH----DILGQAQTGTGKTGAFGIP 59
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
++++++ GE+ +++LI+ PTRELA+QV + LK +KG NV
Sbjct: 60 LIEKVV-------------GEQG--------VQSLILAPTRELAMQVAEQLKVFSKGQNV 98
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
+VV + GGM E+Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M
Sbjct: 99 QVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEM 155
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
+ G +++ I+D +P +EQ QT + S+ K QTLV
Sbjct: 156 MNMGFIDDMRFIMDKIP---------AEQRQTML-FSATMPKAIQTLV 193
>gi|445059172|ref|YP_007384576.1| DEAD-box ATP dependent DNA helicase [Staphylococcus warneri SG1]
gi|443425229|gb|AGC90132.1| DEAD-box ATP dependent DNA helicase [Staphylococcus warneri SG1]
Length = 509
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 134/228 (58%), Gaps = 40/228 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA--AHQGKVDIIGAAETGSGKTLAFGLP 232
+ EL + ++++ +GFKEPTPIQK IP A H DI+G A+TG+GKT AFG+P
Sbjct: 4 FKELGISDKTVQTLESMGFKEPTPIQKDSIPYALEGH----DILGQAQTGTGKTGAFGIP 59
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
++++++ GE+ +++LI+ PTRELA+QV + LK +KG NV
Sbjct: 60 LIEKVV-------------GEQG--------VQSLILAPTRELAMQVAEQLKVFSKGQNV 98
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
+VV + GGM E+Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M
Sbjct: 99 QVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEM 155
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
+ G +++ I+D +P +EQ QT + S+ K QTLV
Sbjct: 156 MNMGFIDDMRFIMDKIP---------AEQRQTML-FSATMPKAIQTLV 193
>gi|374323237|ref|YP_005076366.1| RNA helicase exp9 (Exported protein 9) [Paenibacillus terrae
HPL-003]
gi|357202246|gb|AET60143.1| RNA helicase exp9 (Exported protein 9) [Paenibacillus terrae
HPL-003]
Length = 529
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 141/255 (55%), Gaps = 54/255 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E L P ++++I LGF+E TPIQ IP A QG+ D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFNLEPKVLEAITELGFEEATPIQSQSIPLAL-QGR-DMIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ +K +RALI+ PTRELA+QV + ++++++ +R
Sbjct: 62 SKISRNDDK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRT 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 102 LPIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 159 MGFMEDIQSILKQVP------------------------DERQTMLFSATMPPNIKRLAE 194
Query: 410 DFRKKLKHGSLKLKQ 424
F K +H S+ KQ
Sbjct: 195 QFLKNPEHVSVIPKQ 209
>gi|310659566|ref|YP_003937287.1| ATP-dependent RNA helicase; cold shock [[Clostridium] sticklandii]
gi|308826344|emb|CBH22382.1| ATP-dependent RNA helicase; cold shock [[Clostridium] sticklandii]
Length = 515
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 143/269 (53%), Gaps = 59/269 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NEL L L+K++ +GF PTPIQ+ IP A QG +D+IG A+TG+GKT AFG+P++
Sbjct: 4 FNELGLQEELLKAVLDMGFDSPTPIQEQIIPLAM-QG-IDLIGQAQTGTGKTAAFGIPLL 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ EKG +A ++ALI+ PTRELALQV+ + +AK NV
Sbjct: 62 SKI------------EKGNKA--------VQALILAPTRELALQVSQEINRLAKYKNVEA 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG KQ R LK P++VV TPGR + M ++ + L + +LDEAD M+
Sbjct: 102 IAIYGGEDIGKQIRGLKKNPQIVVATPGRFMDHM---RRNTINLANIQTVILDEADEMLS 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 409
G ++++I+ +P +RQTL+FSAT+ ++S
Sbjct: 159 MGFIEDIETILQEVP------------------------SERQTLLFSATMPKRIQSVSQ 194
Query: 410 DFRKKLKHGSLKLKQSVNGLNSIETLSER 438
F K + ++K N +++T+ +R
Sbjct: 195 KFMKSPQTVAVK-----NKTMTVDTIEQR 218
>gi|168025828|ref|XP_001765435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683285|gb|EDQ69696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 535
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 129/231 (55%), Gaps = 24/231 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L P L+K++ ++G+ +P+PIQ A IP Q D+IG AETGSGKT AF LP++
Sbjct: 116 WAEGALSPELLKAVQKVGYTKPSPIQMAAIPIGLQQR--DVIGIAETGSGKTAAFVLPML 173
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ + L EE E P A+++ PTRELA Q+ D + A +++RV
Sbjct: 174 TYISK--------LPPMTEEIEAEGPY----AVVMAPTRELAQQIEDETVKFAHFLDIRV 221
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V IVGG S E+Q L+ E+V+ TPGRL + + E+ L+ ++ VLDEADRMI+
Sbjct: 222 VSIVGGQSIEEQGFKLRQGCEVVIATPGRLLDCL---ERRYAVLNQCNYVVLDEADRMID 278
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++ ++D +P +N E + + T + R T +FSAT+
Sbjct: 279 MGFEPQVMGVLDAMPSSNLKPENEDAELDT-------HKIYRTTYMFSATM 322
>gi|258422918|ref|ZP_05685818.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus A9635]
gi|417891554|ref|ZP_12535616.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21200]
gi|418283345|ref|ZP_12896092.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21202]
gi|418307556|ref|ZP_12919253.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21194]
gi|418560738|ref|ZP_13125247.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21252]
gi|418889888|ref|ZP_13444016.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1524]
gi|418994781|ref|ZP_13542414.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG290]
gi|257846942|gb|EEV70956.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus A9635]
gi|341851971|gb|EGS92873.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21200]
gi|365167681|gb|EHM59059.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21202]
gi|365245536|gb|EHM86169.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21194]
gi|371971160|gb|EHO88567.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21252]
gi|377741714|gb|EHT65700.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG290]
gi|377751205|gb|EHT75138.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1524]
Length = 506
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIPAA-----------------------QRQTMLFSATM 185
>gi|418322741|ref|ZP_12934053.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
pettenkoferi VCU012]
gi|365231063|gb|EHM72126.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
pettenkoferi VCU012]
Length = 496
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 133/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + +++++ +GF+EPTPIQ+ IP A +G+ DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISAKTVETLHNMGFEEPTPIQQESIPYAL-EGR-DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK + ++ALI+ PTRELA+QV + L+E ++G VRV
Sbjct: 62 ---------------------EKVVGRDGVQALILAPTRELAMQVAEQLREFSEGQRVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM ++Q + LK RP++VVGTPGR+ + ++ +HTL VLDEAD M+
Sbjct: 101 VTVFGGMPIDRQIKALKKRPQIVVGTPGRVIDHLNRRTLKTNGIHTL---VLDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +++RQT++FSAT+
Sbjct: 158 MGFIDDMKFIMDKIP-----------------------KEQRQTMLFSATM 185
>gi|405961989|gb|EKC27711.1| Putative ATP-dependent RNA helicase DDX49 [Crassostrea gigas]
gi|405977898|gb|EKC42325.1| Putative ATP-dependent RNA helicase DDX49 [Crassostrea gigas]
Length = 464
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 123/232 (53%), Gaps = 48/232 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L+ L + +G ++PTPIQ CIP +GK D IG A+TGSGKT AF LPI+
Sbjct: 18 FEKLGLNEWLWTQCHNMGLRQPTPIQVNCIPPIL-EGK-DCIGCAKTGSGKTAAFALPIL 75
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q+L E+ P G + AL++TPTRELA Q+ + + K INVRV
Sbjct: 76 QKLSED-------------------PFG-IFALVLTPTRELAFQIAEQFNVLGKPINVRV 115
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ +Q L+ +P +V+ TPGRL + + + L + F VLDEADR+IE
Sbjct: 116 TVITGGLDMMQQGIDLQVKPHIVISTPGRLADHLQSCDTF--SLRKIKFLVLDEADRLIE 173
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ +L++I +LP KKRQTL+FSAT+
Sbjct: 174 DDFGEQLETIFKVLP------------------------KKRQTLLFSATMT 201
>gi|427429668|ref|ZP_18919655.1| ATP-dependent RNA helicase RhlE [Caenispirillum salinarum AK4]
gi|425879905|gb|EKV28606.1| ATP-dependent RNA helicase RhlE [Caenispirillum salinarum AK4]
Length = 469
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 125/231 (54%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L+ L+K++ G++ PTPIQ IP G+ D++G A+TG+GKT AF LP++
Sbjct: 4 FTDLGLNESLLKALAEDGYETPTPIQAKAIPLLL-DGR-DVLGIAQTGTGKTAAFALPML 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRL++ +AG PKG RALI+TPTRELA+Q+ D +K + + R
Sbjct: 62 QRLMDSNRRAG--------------PKG-CRALILTPTRELAVQINDSIKSYGRHLRHRT 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ Q R L +L++ TPGRL +LM+ G V + FVLDEADRM++
Sbjct: 107 ACIFGGVGMNPQIRALSGGVDLLIATPGRLIDLMNQG---YVRFDKVEEFVLDEADRMLD 163
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G R+++ ++D LP R TL+FSAT+
Sbjct: 164 MGFVRDVRKVVDRLP------------------------GDRHTLLFSATM 190
>gi|431792618|ref|YP_007219523.1| DNA/RNA helicase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782844|gb|AGA68127.1| DNA/RNA helicase, superfamily II [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 500
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 127/234 (54%), Gaps = 49/234 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+ EL L L+KS+ +GF+E TPIQ+ IP A +GK D+IG A+TG+GKT AFG+
Sbjct: 1 MSTFKELGLSEPLIKSVLNMGFEEATPIQEQTIPLAL-EGK-DVIGQAQTGTGKTAAFGI 58
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P++Q++ E E ++ +++TPTRELA+QV + L ++ +
Sbjct: 59 PLIQKIAETSE--------------------DIQGIVLTPTRELAVQVAEELNKIGQFKG 98
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+R +PI GG ++Q R LK RP ++V TPGRL + M + + L ++ +LDEAD
Sbjct: 99 IRTLPIYGGQEIDRQIRALKKRPHIIVATPGRLMDHM---RRRTIRLQNINMVILDEADE 155
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M+ G ++++I+ +P + RQTL+FSAT+
Sbjct: 156 MLNMGFVEDIETILQEIP------------------------EARQTLLFSATM 185
>gi|283771250|ref|ZP_06344139.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus H19]
gi|283459455|gb|EFC06548.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus H19]
Length = 506
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|195579916|ref|XP_002079802.1| GD24145 [Drosophila simulans]
gi|194191811|gb|EDX05387.1| GD24145 [Drosophila simulans]
Length = 641
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 144/239 (60%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +WNE ++ I ++G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 208 IPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 265
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 266 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFG 314
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 315 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 371
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F+AT+
Sbjct: 372 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATM 430
>gi|16768302|gb|AAL28370.1| GM01081p [Drosophila melanogaster]
Length = 641
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 144/239 (60%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +WNE ++ I ++G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 208 IPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 265
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 266 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFG 314
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 315 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 371
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F+AT+
Sbjct: 372 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATM 430
>gi|384550878|ref|YP_005740130.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus JKD6159]
gi|302333727|gb|ADL23920.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus JKD6159]
Length = 506
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|347751920|ref|YP_004859485.1| DEAD/DEAH box helicase domain-containing protein [Bacillus
coagulans 36D1]
gi|347584438|gb|AEP00705.1| DEAD/DEAH box helicase domain protein [Bacillus coagulans 36D1]
Length = 475
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 130/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L P ++K++ R+GF+E +PIQ A IP QGK DIIG A+TG+GKT AFG+P++
Sbjct: 4 FSELNLSPAILKAVKRMGFEEASPIQAATIPLTM-QGK-DIIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ + R + +++ +II PTRELA+QV++ L + + V V
Sbjct: 62 EKI-DHRSR-------------------NIQGIIIAPTRELAIQVSEELYRIGQDSRVHV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GG +Q R LK P+++VGTPGR+ + + G L +HTL VLDEAD M+
Sbjct: 102 LAVYGGQDISRQIRALKNHPQIIVGTPGRILDHIHRGTLKLDHVHTL---VLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P K RQT++FSAT+
Sbjct: 159 MGFIDDIEAILSTVP------------------------KDRQTMLFSATM 185
>gi|379796406|ref|YP_005326407.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356873399|emb|CCE59738.1| Probable DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus
subsp. aureus MSHR1132]
Length = 506
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIPAA-----------------------QRQTMLFSATM 185
>gi|356522085|ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Glycine
max]
Length = 701
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 134/242 (55%), Gaps = 28/242 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
++I +WNE +L L+K++ + G+K P+PIQ A IP Q D+IG AETGSGK
Sbjct: 274 SKIPRPMRSWNESKLTSELLKAVEKAGYKTPSPIQMAAIPLGLQQR--DVIGIAETGSGK 331
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF LP++ + L E+ E P A+++ PTRELA Q+ D +
Sbjct: 332 TAAFVLPMLSYITR--------LPPISEDNEAEGPY----AVVMAPTRELAQQIEDETVK 379
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
A+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ V
Sbjct: 380 FAQYLGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCL---ERRYAVLNQCNYVV 436
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSA 403
LDEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSA
Sbjct: 437 LDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSA 487
Query: 404 TI 405
T+
Sbjct: 488 TM 489
>gi|255561546|ref|XP_002521783.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223538996|gb|EEF40593.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 714
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 134/242 (55%), Gaps = 28/242 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
++I +W E +L P L+K++ R G+++P+PIQ A IP Q D+IG AETGSGK
Sbjct: 287 SKIPRPMRSWPESKLTPELLKAVERAGYEKPSPIQMAAIPLGLQQR--DVIGIAETGSGK 344
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF LP++ + L E+ E P A+++ PTRELA Q+ D +
Sbjct: 345 TAAFVLPMLTYI--------SRLPPMSEDNEAEGPY----AVVMAPTRELAQQIEDETVK 392
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
A + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ V
Sbjct: 393 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLLDCL---ERRYAVLNQCNYVV 449
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSA 403
LDEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSA
Sbjct: 450 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSA 500
Query: 404 TI 405
T+
Sbjct: 501 TM 502
>gi|429220230|ref|YP_007181874.1| DNA/RNA helicase [Deinococcus peraridilitoris DSM 19664]
gi|429131093|gb|AFZ68108.1| DNA/RNA helicase, superfamily II [Deinococcus peraridilitoris DSM
19664]
Length = 477
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 128/239 (53%), Gaps = 49/239 (20%)
Query: 168 ISTEF-DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
++T F DA++ L LH L +++ LG+ +PTPIQ +P A QG+ D++GAA+TGSGKT
Sbjct: 1 MTTTFADAFSALDLHASLQRAVGELGYAKPTPIQALALPPAL-QGR-DVLGAAQTGSGKT 58
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
AF LPI+QRL + P+G RAL++ PTRELA Q+ + +
Sbjct: 59 AAFLLPILQRL-------------------QGLPRGKTRALVLAPTRELAAQIEESALAL 99
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
AK +VRV + GG+S + QE+ + +L++ TPGRL + + L L VL
Sbjct: 100 AKFTDVRVASVFGGVSMKPQEKAFRGGTDLIIATPGRLLDHF---QHPYARLEALEVLVL 156
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
DEADRM++ G +++ ++ LP +RQTL FSAT+
Sbjct: 157 DEADRMLDMGFLPDIRRVLRHLP------------------------ARRQTLFFSATM 191
>gi|282917430|ref|ZP_06325183.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus D139]
gi|282318632|gb|EFB48989.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus D139]
Length = 506
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAERLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|195115088|ref|XP_002002099.1| GI14145 [Drosophila mojavensis]
gi|193912674|gb|EDW11541.1| GI14145 [Drosophila mojavensis]
Length = 837
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 144/239 (60%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W+E P +++ I +G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 404 IPNPIRSWSESGFPPEIIEIIDSVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 461
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 462 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETIKFG 510
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 511 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 567
Query: 348 EADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 568 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDEKKLMENFYTKKKYRQTVMFTATM 626
>gi|342218233|ref|ZP_08710855.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
135-E]
gi|341590668|gb|EGS33904.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
135-E]
Length = 515
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 131/234 (55%), Gaps = 47/234 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+ + L + +++++ +GF+EPTPIQ IP A QG+ D+IG A+TG+GKT AFG+
Sbjct: 2 LEKFQNLNISTTILQALNTMGFEEPTPIQAEAIPVAL-QGQ-DMIGQAQTGTGKTAAFGI 59
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P+++++L + + +++ ++++PTRELA+QV + L +A+ +
Sbjct: 60 PVLEKILASSKTS------------------NVQTIVLSPTRELAMQVAEELNHLAQYTS 101
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
++ +PI GG E+Q R L+ P+++V TPGRL + M G HL E+ T+ VLDEAD
Sbjct: 102 IQALPIYGGQDMERQLRRLRKHPQIIVATPGRLIDHMKRGTIHLDEISTI---VLDEADE 158
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G ++ +I+ P T RQTL+FSAT+
Sbjct: 159 MLDMGFIDDIHTIMSATPET------------------------RQTLLFSATM 188
>gi|90578695|ref|ZP_01234505.1| putative ATP-dependent RNA helicase, DEAD boxfamily protein
[Photobacterium angustum S14]
gi|90439528|gb|EAS64709.1| putative ATP-dependent RNA helicase, DEAD boxfamily protein
[Photobacterium angustum S14]
Length = 427
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 127/236 (53%), Gaps = 38/236 (16%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ L LHP L+K++ LG+ PT +Q+ IP A +G D++ A+TG+GKT AF LP+
Sbjct: 2 SFQSLNLHPNLLKALTELGYSTPTDVQQQAIPLAL-KGD-DVMAGAQTGTGKTAAFALPL 59
Query: 234 MQRLL---EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
+QRL+ + E+ +E + + ++RALI+TPTRELA QV D + AK
Sbjct: 60 LQRLMTLPSQAEQVSTAIENN------HKSRNNIRALILTPTRELAQQVYDSITTYAKYT 113
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
++V GG S Q + L A E++V TPGRL + + G L E+ T FVLDEAD
Sbjct: 114 EIKVAVAYGGTSMNVQVKALNAGAEILVATPGRLLDHVFNGSVSLSEVET---FVLDEAD 170
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
RM++ G ++Q I+ +P +RQTL FSAT +
Sbjct: 171 RMLDMGFIVDIQRIMKRMP------------------------AERQTLFFSATFS 202
>gi|290987818|ref|XP_002676619.1| predicted protein [Naegleria gruberi]
gi|284090222|gb|EFC43875.1| predicted protein [Naegleria gruberi]
Length = 493
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 154/303 (50%), Gaps = 45/303 (14%)
Query: 109 DGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPD-----DAEEELV 163
D D N + +KN + KK +K K + E+SV D + + +V
Sbjct: 18 DDTTDKNSIISSSHSTVKNNQKKKIRKDKIEDERNWTEKSVNEMTDRDWRIFREDFDIVV 77
Query: 164 SEAEISTEFDAWNELRLHPL-LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
+ +W+E L PL ++ +I L FKEPT +QK CIP A + +D++G AETG
Sbjct: 78 KGGRVPPPLRSWDETTLLPLEIINAITDLKFKEPTAVQKQCIPIAMN--GIDLVGLAETG 135
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 282
SGKT ++ +P+ ++ + L +E K P G LI+ PTRELA Q+
Sbjct: 136 SGKTASYIIPMCCQIAK--------LPRMNDEIAKDGPYG----LILVPTRELAEQIERE 183
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
+ A+ RV I+GG+S EKQ RL++ E++V TPGRL + ++ +V L+
Sbjct: 184 ATKYARQFEFRVQAIIGGVSIEKQSRLIRGGCEILVATPGRLIDCLNNS---IVVLNQCH 240
Query: 343 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 402
F VLDEAD+MIE +++ +I++ +P + +Q RQT++FS
Sbjct: 241 FIVLDEADKMIEMNFEKDVNTILENMP-------------------THIQ---RQTMLFS 278
Query: 403 ATI 405
AT+
Sbjct: 279 ATM 281
>gi|294142025|ref|YP_003558003.1| DEAD/DEAH box helicase [Shewanella violacea DSS12]
gi|293328494|dbj|BAJ03225.1| ATP-dependent RNA helicase, DEAD box family [Shewanella violacea
DSS12]
Length = 427
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 38/232 (16%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA-AHQGKVDIIGAAETGSGKTLAFGLPI 233
++ L L P L++ + LG+ +PTPIQ IPA A Q DI+ A+TGSGKT AF LPI
Sbjct: 13 FSSLSLRPELLQVLTELGYTQPTPIQTQAIPAILAGQ---DIMAGAQTGSGKTAAFALPI 69
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ +L ++ +K EA+ A K +RAL++TPTRELALQV + AK V+
Sbjct: 70 LNKL------TAQICLQK-TEAQDSADKPAIRALVLTPTRELALQVHGSFVKYAKLTQVK 122
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG+S + Q ++L A +++V TPGRL + + G + L+ L F V DEADRM+
Sbjct: 123 SALVYGGVSIDAQAQILAAGVDILVATPGRLLDHLRRGS---LNLNQLEFLVFDEADRML 179
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G E+ +I+ LP K RQTL+FSAT
Sbjct: 180 DMGFKDEIDAIVKQLP------------------------KTRQTLLFSATF 207
>gi|375090043|ref|ZP_09736362.1| hypothetical protein HMPREF9708_00752 [Facklamia languida CCUG
37842]
gi|374565936|gb|EHR37191.1| hypothetical protein HMPREF9708_00752 [Facklamia languida CCUG
37842]
Length = 499
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 125/217 (57%), Gaps = 50/217 (23%)
Query: 190 RLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLE 249
++GF+EPTPIQ+ IP A QGK D+IG A+TG+GKT AFGLP++Q L +R ++
Sbjct: 18 QMGFEEPTPIQQQAIPLAL-QGK-DLIGQAQTGTGKTAAFGLPLLQHL--DRNQSA---- 69
Query: 250 EKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ-ER 308
++ L++TPTRELA+QV + L + KG+ RV + GG S KQ ER
Sbjct: 70 --------------IQGLVVTPTRELAIQVQEELYRLGKGVRARVYVVYGGTSLSKQIER 115
Query: 309 LLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 368
+ + +P+++VGTPGRL +L+ ++ +++ + L VLDEAD M+ G ++++II
Sbjct: 116 IKRQQPQIIVGTPGRLLDLI---QRKVLKFNHLQTLVLDEADEMLNMGFIEDIKAIIQAT 172
Query: 369 PMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
P K RQTL+FSAT+
Sbjct: 173 P------------------------KNRQTLLFSATM 185
>gi|145257496|ref|XP_001401758.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Aspergillus
niger CBS 513.88]
gi|143359821|sp|A2QIL2.1|PRP28_ASPNC RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|134058672|emb|CAK38656.1| unnamed protein product [Aspergillus niger]
Length = 810
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 150/274 (54%), Gaps = 21/274 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W+E L LM+ I R+G+KEPTPIQ+A IP A D+IG A TGSGKT AF LP+
Sbjct: 373 SWDESNLPKRLMELINRVGYKEPTPIQRAAIPIAMQNR--DLIGVAVTGSGKTAAFLLPL 430
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + E + +E E G A+++ PTRELA Q+ K+ +
Sbjct: 431 LCYIAEL---------PRIDEFEWRKADGPY-AIVLAPTRELAQQIEIEAKKFTGPLGFN 480
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI
Sbjct: 481 VVSIVGGHSLEEQAYSLRDGAEIIIATPGRLVDCI---ERRILVLSQCCYVIMDEADRMI 537
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSATIALSAD- 410
+ G + I+D LP++N + + + ++ ++ Q + RQT++++AT+ + +
Sbjct: 538 DLGFEEPVNKILDALPVSNEKPDSEDAENPLAMSRHINHDQHRYRQTMMYTATMPTAVER 597
Query: 411 -FRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
RK L+ ++ S +++T+ +R M A
Sbjct: 598 IARKYLRRPAIVTIGSAG--EAVDTVEQRVEMIA 629
>gi|356565647|ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
[Glycine max]
gi|356565649|ref|XP_003551051.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 2
[Glycine max]
Length = 706
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 134/242 (55%), Gaps = 28/242 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
++I +WNE +L L+K++ + G+K P+PIQ A IP Q D+IG AETGSGK
Sbjct: 279 SKIPRPMRSWNESKLTNELLKAVEKAGYKTPSPIQMAAIPLGLQQR--DVIGIAETGSGK 336
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF LP++ + L E+ E P A+++ PTRELA Q+ D +
Sbjct: 337 TAAFVLPMLSYITR--------LPPISEDNEAEGPY----AVVMAPTRELAQQIEDETVK 384
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
A+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ V
Sbjct: 385 FAQYLGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCL---ERRYAVLNQCNYVV 441
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSA 403
LDEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSA
Sbjct: 442 LDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSA 492
Query: 404 TI 405
T+
Sbjct: 493 TM 494
>gi|153955940|ref|YP_001396705.1| RNA helicase [Clostridium kluyveri DSM 555]
gi|219856282|ref|YP_002473404.1| hypothetical protein CKR_2939 [Clostridium kluyveri NBRC 12016]
gi|146348798|gb|EDK35334.1| Predicted RNA helicase [Clostridium kluyveri DSM 555]
gi|219570006|dbj|BAH07990.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 524
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 124/233 (53%), Gaps = 51/233 (21%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++N+L LHP + ++I +GF+EP+ IQ IP DIIG A+TG+GKTLAFG P+
Sbjct: 5 SFNDLNLHPKVFEAIDNMGFEEPSQIQAESIPVILEGN--DIIGQAQTGTGKTLAFGAPM 62
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKG-HLRALIITPTRELALQVTDHLKEVAKGINV 292
+ ++ PK H+ ALI+TPTRELA+QV D L +AK + +
Sbjct: 63 LSKI---------------------TPKNKHISALILTPTRELAIQVNDELSRIAKFMKI 101
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
++PI GG E+Q + LK +VVGTPGR+ + + + ++L + F +DEAD M
Sbjct: 102 LLLPIYGGQPIERQIKSLKRGINIVVGTPGRILDHL---HRKTLDLSNIEFLTIDEADEM 158
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
++ G +++ II SN RQTL+FSAT+
Sbjct: 159 LDMGFIEDIEEII------KASNPN------------------RQTLLFSATM 187
>gi|195147728|ref|XP_002014827.1| GL19380 [Drosophila persimilis]
gi|194106780|gb|EDW28823.1| GL19380 [Drosophila persimilis]
Length = 437
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 142/239 (59%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +WNE P ++ I ++G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 4 IPNPIRSWNESGFPPEIIDIIDKVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 61
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 62 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GP----YAIIMAPTRELAQQIEEETIKFG 110
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ E + L+ ++ VLD
Sbjct: 111 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVL---ENRYLVLNQCTYIVLD 167
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + + + + + + +KK RQT++F+AT+
Sbjct: 168 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDENKLMENFYTKKKYRQTVMFTATM 226
>gi|328956797|ref|YP_004374183.1| ATP-dependent RNA helicase RhlE [Carnobacterium sp. 17-4]
gi|328673121|gb|AEB29167.1| ATP-dependent RNA helicase RhlE [Carnobacterium sp. 17-4]
Length = 423
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 126/231 (54%), Gaps = 45/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NEL L+ L+ ++ G+ + TPIQ+ IP + D++G A+TG+GKT AF LPI+
Sbjct: 3 FNELELNQHLLHALKEAGYTKATPIQEDAIPHLMNNK--DLLGCAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q ++EE K KG ++ALI+ PTRELA+Q+ D + AK + + +
Sbjct: 61 QNIMEE----------------KTIGKGAIKALILAPTRELAIQIGDSFQTYAKYLPLNI 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S Q LK +++V TPGRL +L+ G V+L+ + FFVLDEAD M++
Sbjct: 105 QVIFGGVSQNPQTATLKRGTDILVATPGRLLDLIRQG---FVKLNQVDFFVLDEADMMLD 161
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G R+++ II LP KKRQ++ FSAT+
Sbjct: 162 MGMLRDVRHIIRELP------------------------KKRQSMFFSATM 188
>gi|297735665|emb|CBI18352.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 133/242 (54%), Gaps = 28/242 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
++I +W E +L P L+K++ R G+K P+PIQ A IP Q D+IG AETGSGK
Sbjct: 203 SKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQR--DVIGIAETGSGK 260
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 261 TAAFVLPMLTYI--------SRLPPISEENEAEGPY----AVVMAPTRELAQQIEDETVK 308
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
A + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ V
Sbjct: 309 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVV 365
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSA 403
LDEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSA
Sbjct: 366 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSA 416
Query: 404 TI 405
T+
Sbjct: 417 TM 418
>gi|410081467|ref|XP_003958313.1| hypothetical protein KAFR_0G01440 [Kazachstania africana CBS 2517]
gi|372464901|emb|CCF59178.1| hypothetical protein KAFR_0G01440 [Kazachstania africana CBS 2517]
Length = 719
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 51/311 (16%)
Query: 170 TEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
E W +L + ++ + +LGF +PT IQ IP G DI+G A TGSGKTLA
Sbjct: 131 VELPEWTKLAKFSMTTLQGLAKLGFTKPTEIQAKTIPLGL--GNHDIMGKASTGSGKTLA 188
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA--LIITPTRELALQVTDHLKEV 286
+G+P+++ ++ + K + RA LI TPTRELA QVT HL +V
Sbjct: 189 YGIPMLENFVKS-----------------FKSKDNNRAIGLIFTPTRELAQQVTQHLTKV 231
Query: 287 AKGI-----NVRVVPIVGGMSTEKQERLLKARP--ELVVGTPGRLWELMSGGEKHLVELH 339
++ I ++ + GG+S +KQERLLK + ++V+ TPGR EL+ + +
Sbjct: 232 SELILKEKNKYAILSLTGGLSIQKQERLLKYQGSGKIVIATPGRFLELLEKNNELIERFG 291
Query: 340 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTL 399
+ VLDEADR++++GHF E + I+ +L G+ +S ++ QT+
Sbjct: 292 KIDTLVLDEADRLLQDGHFDEFEKILKLL----GNYRKKSSKSHW------------QTM 335
Query: 400 VFSATIALSADFRKKLKHGSLKLKQSVNGLNSIET----LSERAGMRANVAIVDLTNVSV 455
+FSAT S D KL K +G N +ET L + ++ IVD
Sbjct: 336 IFSAT--FSTDLFNKLASNHNHNKNKNDGENEMETVLKHLMTKIHFKSKPVIVDTNPDEK 393
Query: 456 LANKLEESFIE 466
++++++ES IE
Sbjct: 394 VSSQIKESLIE 404
>gi|373859820|ref|ZP_09602543.1| DEAD/DEAH box helicase domain protein [Bacillus sp. 1NLA3E]
gi|372450463|gb|EHP23951.1| DEAD/DEAH box helicase domain protein [Bacillus sp. 1NLA3E]
Length = 487
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 128/233 (54%), Gaps = 49/233 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L P +MKSI ++GF+E TPIQ IP + D+IG A+TG+GKT AFG+P++
Sbjct: 4 FQDLGLSPAMMKSIKKMGFEEATPIQAETIPLSLENK--DLIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ ++ + +++ +++ PTRELA+QV++ L ++ G VRV
Sbjct: 62 EKVDKDAD--------------------YIQGIVVAPTRELAIQVSEELYKIGYGKRVRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK P ++VGTPGRL + ++ L +HT +LDEAD M+
Sbjct: 102 LPIYGGQDINRQIRALKKNPHIIVGTPGRLIDHINRKNLRLDRVHTA---ILDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
G ++++I+ +P +RQTL+FSAT+ +
Sbjct: 159 MGFIEDIEAILSQIP------------------------AERQTLLFSATMPM 187
>gi|336115431|ref|YP_004570198.1| DEAD/DEAH box helicase [Bacillus coagulans 2-6]
gi|335368861|gb|AEH54812.1| DEAD/DEAH box helicase domain protein [Bacillus coagulans 2-6]
Length = 475
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 130/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L P ++K++ R+GF+E +PIQ A IP QGK DIIG A+TG+GKT AFG+P++
Sbjct: 4 FSELNLSPAILKAVKRMGFEEASPIQAATIPLTM-QGK-DIIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ + R + +++ +II PTRELA+QV++ L + + V V
Sbjct: 62 EKI-DHRSR-------------------NIQGIIIAPTRELAIQVSEELYRIGQYSRVHV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GG +Q R LK P+++VGTPGR+ + + G L +HTL VLDEAD M+
Sbjct: 102 LAVYGGQDISRQIRALKNHPQIIVGTPGRILDHIHRGTLKLDHVHTL---VLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P K RQT++FSAT+
Sbjct: 159 MGFIDDIEAILSTVP------------------------KDRQTMLFSATM 185
>gi|257896496|ref|ZP_05676149.1| helicase [Enterococcus faecium Com12]
gi|257833061|gb|EEV59482.1| helicase [Enterococcus faecium Com12]
Length = 503
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 134/260 (51%), Gaps = 54/260 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-VGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIIFQVP------------------------DQRQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLKQSVNGL 429
F K H +K K+ L
Sbjct: 194 KFMKSPHHVKIKAKEMTADL 213
>gi|390332079|ref|XP_781784.3| PREDICTED: probable ATP-dependent RNA helicase DDX49
[Strongylocentrotus purpuratus]
Length = 478
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 120/232 (51%), Gaps = 48/232 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L LH L++ +G K+PTPIQ CIP D IG A+TGSGKT AF LPI
Sbjct: 13 SFSGLGLHDWLVRQCEAVGIKQPTPIQHNCIPPILKGS--DCIGCAKTGSGKTAAFALPI 70
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q+L E+ P G + L++TPTREL +Q+ + + + K I +R
Sbjct: 71 LQKLSED-------------------PYG-VFGLVVTPTRELGIQIAEQFRVLGKPIGLR 110
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V ++GG+ +Q R L +P +V+ TPGRL + + +LH + F VLDEADR++
Sbjct: 111 VTVVIGGIDMVEQGRELSKKPHIVIATPGRLADHIKSTST--FDLHAIKFLVLDEADRLL 168
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
E +L+ I D LP KRQTL+FSATI
Sbjct: 169 EGNFGPDLEVIFDFLP------------------------AKRQTLLFSATI 196
>gi|212638043|ref|YP_002314563.1| ATP-dependent RNA helicase [Anoxybacillus flavithermus WK1]
gi|212559523|gb|ACJ32578.1| ATP-dependent RNA helicase [Anoxybacillus flavithermus WK1]
Length = 471
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 128/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NE L P LMK++ ++GF+E TPIQ A IP + D+IG A+TG+GKT AFG+P++
Sbjct: 7 FNEFGLSPELMKAVSKMGFEEATPIQAATIPLSLQNR--DVIGQAQTGTGKTAAFGIPLI 64
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ + +A ++A+++ PTRELA+QV++ L ++ VRV
Sbjct: 65 EKI------------DMNNDA--------VQAIVVAPTRELAIQVSEELYKIGSTKRVRV 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG E+Q R LK P ++VGTPGR+ + + L +HT+ VLDEAD M+
Sbjct: 105 LPIYGGQDIERQIRALKKHPHIIVGTPGRILDHIQRRTLRLQHVHTV---VLDEADEMLN 161
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P +RQTL+FSAT+
Sbjct: 162 MGFVEDIEAILSHVP------------------------TERQTLLFSATM 188
>gi|15925071|ref|NP_372605.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927656|ref|NP_375189.1| hypothetical protein SA1885 [Staphylococcus aureus subsp. aureus
N315]
gi|21283733|ref|NP_646821.1| hypothetical protein MW2004 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486874|ref|YP_044095.1| helicase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57650754|ref|YP_186888.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus COL]
gi|87161548|ref|YP_494683.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195982|ref|YP_500795.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268533|ref|YP_001247476.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus JH9]
gi|150394597|ref|YP_001317272.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus JH1]
gi|151222197|ref|YP_001333019.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156980397|ref|YP_001442656.1| hypothetical protein SAHV_2066 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161510293|ref|YP_001575952.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253316240|ref|ZP_04839453.1| putative helicase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006870|ref|ZP_05145471.2| putative helicase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257793840|ref|ZP_05642819.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9781]
gi|258407008|ref|ZP_05680158.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9763]
gi|258422029|ref|ZP_05684946.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9719]
gi|258433601|ref|ZP_05688674.1| ATP-dependent RNA helicase [Staphylococcus aureus A9299]
gi|258440496|ref|ZP_05690666.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258445704|ref|ZP_05693882.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus A6300]
gi|258450158|ref|ZP_05698253.1| ATP-dependent RNA helicase [Staphylococcus aureus A6224]
gi|258453208|ref|ZP_05701199.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus A5948]
gi|258453387|ref|ZP_05701369.1| ATP-dependent RNA helicase [Staphylococcus aureus A5937]
gi|262049250|ref|ZP_06022125.1| hypothetical protein SAD30_0461 [Staphylococcus aureus D30]
gi|262052494|ref|ZP_06024692.1| hypothetical protein SA930_0070 [Staphylococcus aureus 930918-3]
gi|269203717|ref|YP_003282986.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus subsp.
aureus ED98]
gi|282895275|ref|ZP_06303488.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A8117]
gi|282911647|ref|ZP_06319446.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282923070|ref|ZP_06330755.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9765]
gi|282929553|ref|ZP_06336950.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A10102]
gi|284025116|ref|ZP_06379514.1| putative helicase [Staphylococcus aureus subsp. aureus 132]
gi|294850566|ref|ZP_06791293.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9754]
gi|295407012|ref|ZP_06816814.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A8819]
gi|296275711|ref|ZP_06858218.1| putative helicase [Staphylococcus aureus subsp. aureus MR1]
gi|297246745|ref|ZP_06930562.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A8796]
gi|379015208|ref|YP_005291444.1| helicase [Staphylococcus aureus subsp. aureus VC40]
gi|379021757|ref|YP_005298419.1| cold-shock DEAD-box protein A [Staphylococcus aureus subsp. aureus
M013]
gi|384865266|ref|YP_005750625.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|384870631|ref|YP_005753345.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
T0131]
gi|385782321|ref|YP_005758492.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus
11819-97]
gi|386831664|ref|YP_006238318.1| putative helicase [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|387143797|ref|YP_005732191.1| putative helicase [Staphylococcus aureus subsp. aureus TW20]
gi|387151207|ref|YP_005742771.1| Cold-shock DEAD-box protein A [Staphylococcus aureus 04-02981]
gi|387781060|ref|YP_005755858.1| putative helicase [Staphylococcus aureus subsp. aureus LGA251]
gi|415688401|ref|ZP_11452116.1| putative helicase [Staphylococcus aureus subsp. aureus CGS01]
gi|415694064|ref|ZP_11455644.1| putative helicase [Staphylococcus aureus subsp. aureus CGS03]
gi|416841693|ref|ZP_11904548.1| ATP-dependent RNA helicase [Staphylococcus aureus O11]
gi|416847139|ref|ZP_11906948.1| ATP-dependent RNA helicase [Staphylococcus aureus O46]
gi|417650388|ref|ZP_12300160.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21189]
gi|417651619|ref|ZP_12301379.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21172]
gi|417655380|ref|ZP_12305093.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21193]
gi|417799422|ref|ZP_12446562.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21310]
gi|417803227|ref|ZP_12450272.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21318]
gi|417892680|ref|ZP_12536727.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21201]
gi|417897497|ref|ZP_12541428.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21235]
gi|417900259|ref|ZP_12544149.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21266]
gi|417905571|ref|ZP_12549379.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21269]
gi|418277254|ref|ZP_12891868.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21178]
gi|418286656|ref|ZP_12899297.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21209]
gi|418313951|ref|ZP_12925433.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21334]
gi|418319265|ref|ZP_12930649.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21232]
gi|418320043|ref|ZP_12931407.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus VCU006]
gi|418425251|ref|ZP_12998345.1| hypothetical protein MQA_01557 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418428143|ref|ZP_13001132.1| hypothetical protein MQC_01722 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418431028|ref|ZP_13003930.1| hypothetical protein MQE_02589 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418434933|ref|ZP_13006785.1| hypothetical protein MQG_02595 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418437701|ref|ZP_13009479.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS5]
gi|418440630|ref|ZP_13012317.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS6]
gi|418443605|ref|ZP_13015192.1| hypothetical protein MQM_02704 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418446602|ref|ZP_13018064.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS8]
gi|418449687|ref|ZP_13021059.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS9]
gi|418452527|ref|ZP_13023850.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS10]
gi|418455483|ref|ZP_13026734.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418458359|ref|ZP_13029550.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS11b]
gi|418562003|ref|ZP_13126472.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21262]
gi|418567928|ref|ZP_13132287.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21272]
gi|418571317|ref|ZP_13135553.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21283]
gi|418572707|ref|ZP_13136913.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21333]
gi|418580004|ref|ZP_13144094.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1114]
gi|418599110|ref|ZP_13162606.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21343]
gi|418638750|ref|ZP_13201033.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-3]
gi|418641112|ref|ZP_13203326.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-24]
gi|418645440|ref|ZP_13207562.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-55]
gi|418646512|ref|ZP_13208614.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-88]
gi|418649117|ref|ZP_13211147.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-91]
gi|418652298|ref|ZP_13214266.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-99]
gi|418655867|ref|ZP_13217699.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-105]
gi|418658669|ref|ZP_13220382.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-111]
gi|418661301|ref|ZP_13222893.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-122]
gi|418871169|ref|ZP_13425556.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-125]
gi|418875945|ref|ZP_13430194.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC93]
gi|418878939|ref|ZP_13433170.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1165]
gi|418881777|ref|ZP_13435989.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1213]
gi|418884407|ref|ZP_13438597.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1769]
gi|418887111|ref|ZP_13441254.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1150]
gi|418895677|ref|ZP_13449768.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1057]
gi|418904421|ref|ZP_13458458.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1770]
gi|418907013|ref|ZP_13461034.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC345D]
gi|418912631|ref|ZP_13466608.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG547]
gi|418920910|ref|ZP_13474838.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC348]
gi|418926494|ref|ZP_13480390.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG2018]
gi|418929425|ref|ZP_13483309.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1612]
gi|418932399|ref|ZP_13486227.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1750]
gi|418935062|ref|ZP_13488879.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC128]
gi|418947874|ref|ZP_13500213.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-157]
gi|418950869|ref|ZP_13503007.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-160]
gi|418955800|ref|ZP_13507736.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-189]
gi|418989148|ref|ZP_13536816.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1835]
gi|418991998|ref|ZP_13539656.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1096]
gi|419774795|ref|ZP_14300752.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus CO-23]
gi|419783577|ref|ZP_14309361.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-M]
gi|421150952|ref|ZP_15610603.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|424786070|ref|ZP_18212863.1| Cold-shock DEAD-box protein A [Staphylococcus aureus CN79]
gi|440707003|ref|ZP_20887718.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21282]
gi|440735442|ref|ZP_20915048.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus DSM 20231]
gi|443637665|ref|ZP_21121736.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21236]
gi|443640144|ref|ZP_21124139.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21196]
gi|448742179|ref|ZP_21724131.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus
KT/314250]
gi|448743158|ref|ZP_21725070.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus KT/Y21]
gi|81648913|sp|Q6G7M9.1|Y1985_STAAS RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SAS1985
gi|81694077|sp|Q5HEB9.1|Y2072_STAAC RecName: Full=Probable DEAD-box ATP-dependent RNA helicase
SACOL2072
gi|81704263|sp|Q7A0D2.1|Y2004_STAAW RecName: Full=Probable DEAD-box ATP-dependent RNA helicase MW2004
gi|81705333|sp|Q7A4G0.1|Y1885_STAAN RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SA1885
gi|81781186|sp|Q99SH6.1|Y2081_STAAM RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SAV2081
gi|122538977|sp|Q2FWH5.1|Y2316_STAA8 RecName: Full=Probable DEAD-box ATP-dependent RNA helicase
SAOUHSC_02316
gi|123484971|sp|Q2FF45.1|Y2037_STAA3 RecName: Full=Probable DEAD-box ATP-dependent RNA helicase
SAUSA300_2037
gi|13701876|dbj|BAB43168.1| SA1885 [Staphylococcus aureus subsp. aureus N315]
gi|14247854|dbj|BAB58243.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
Mu50]
gi|21205175|dbj|BAB95869.1| MW2004 [Staphylococcus aureus subsp. aureus MW2]
gi|49245317|emb|CAG43792.1| putative helicase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57284940|gb|AAW37034.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus COL]
gi|87127522|gb|ABD22036.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203540|gb|ABD31350.1| ATP-dependent RNA helicase, DEAD box family, putative
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147741602|gb|ABQ49900.1| DEAD/DEAH box helicase domain protein [Staphylococcus aureus subsp.
aureus JH9]
gi|149947049|gb|ABR52985.1| DEAD/DEAH box helicase domain protein [Staphylococcus aureus subsp.
aureus JH1]
gi|150374997|dbj|BAF68257.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156722532|dbj|BAF78949.1| hypothetical protein SAHV_2066 [Staphylococcus aureus subsp. aureus
Mu3]
gi|160369102|gb|ABX30073.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257787812|gb|EEV26152.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9781]
gi|257841341|gb|EEV65785.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9763]
gi|257841929|gb|EEV66361.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9719]
gi|257849332|gb|EEV73311.1| ATP-dependent RNA helicase [Staphylococcus aureus A9299]
gi|257852565|gb|EEV76483.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257855543|gb|EEV78480.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus A6300]
gi|257856632|gb|EEV79538.1| ATP-dependent RNA helicase [Staphylococcus aureus A6224]
gi|257859154|gb|EEV82011.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus A5948]
gi|257864368|gb|EEV87114.1| ATP-dependent RNA helicase [Staphylococcus aureus A5937]
gi|259159615|gb|EEW44661.1| hypothetical protein SA930_0070 [Staphylococcus aureus 930918-3]
gi|259162615|gb|EEW47182.1| hypothetical protein SAD30_0461 [Staphylococcus aureus D30]
gi|262076007|gb|ACY11980.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus subsp.
aureus ED98]
gi|269941681|emb|CBI50088.1| putative helicase [Staphylococcus aureus subsp. aureus TW20]
gi|282324412|gb|EFB54725.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282589032|gb|EFB94136.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A10102]
gi|282593261|gb|EFB98258.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9765]
gi|282762348|gb|EFC02495.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A8117]
gi|285817746|gb|ADC38233.1| Cold-shock DEAD-box protein A [Staphylococcus aureus 04-02981]
gi|294822586|gb|EFG39028.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9754]
gi|294968037|gb|EFG44064.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A8819]
gi|297176405|gb|EFH35677.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A8796]
gi|312830433|emb|CBX35275.1| DEAD/DEAH box helicase family protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315128752|gb|EFT84752.1| putative helicase [Staphylococcus aureus subsp. aureus CGS03]
gi|315196987|gb|EFU27329.1| putative helicase [Staphylococcus aureus subsp. aureus CGS01]
gi|323439203|gb|EGA96930.1| ATP-dependent RNA helicase [Staphylococcus aureus O11]
gi|323442419|gb|EGB00048.1| ATP-dependent RNA helicase [Staphylococcus aureus O46]
gi|329314766|gb|AEB89179.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
T0131]
gi|329724041|gb|EGG60565.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21189]
gi|329726361|gb|EGG62829.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21172]
gi|329729332|gb|EGG65740.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21193]
gi|334272865|gb|EGL91220.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21318]
gi|334273753|gb|EGL92092.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21310]
gi|341839595|gb|EGS81175.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21235]
gi|341843034|gb|EGS84266.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21269]
gi|341848939|gb|EGS90094.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21266]
gi|341857246|gb|EGS98062.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21201]
gi|344178162|emb|CCC88648.1| putative helicase [Staphylococcus aureus subsp. aureus LGA251]
gi|359831066|gb|AEV79044.1| Cold-shock DEAD-box protein A [Staphylococcus aureus subsp. aureus
M013]
gi|364523310|gb|AEW66060.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 11819-97]
gi|365165869|gb|EHM57617.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21209]
gi|365173732|gb|EHM64218.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21178]
gi|365228359|gb|EHM69543.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus VCU006]
gi|365234565|gb|EHM75495.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21334]
gi|365241002|gb|EHM81759.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21232]
gi|371974841|gb|EHO92156.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21262]
gi|371980485|gb|EHO97691.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21283]
gi|371981117|gb|EHO98304.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21272]
gi|371984051|gb|EHP01178.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21333]
gi|374363905|gb|AEZ38010.1| helicase [Staphylococcus aureus subsp. aureus VC40]
gi|374398160|gb|EHQ69350.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21343]
gi|375019875|gb|EHS13425.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-24]
gi|375020751|gb|EHS14267.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-3]
gi|375022082|gb|EHS15574.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-99]
gi|375022959|gb|EHS16425.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-55]
gi|375030376|gb|EHS23693.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-91]
gi|375032669|gb|EHS25895.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-88]
gi|375035253|gb|EHS28383.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-105]
gi|375037800|gb|EHS30808.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-111]
gi|375039092|gb|EHS32036.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-122]
gi|375369103|gb|EHS72994.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-125]
gi|375370525|gb|EHS74330.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-189]
gi|375374056|gb|EHS77700.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-157]
gi|375375282|gb|EHS78872.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-160]
gi|377692852|gb|EHT17231.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1165]
gi|377692975|gb|EHT17352.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1057]
gi|377693343|gb|EHT17715.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1114]
gi|377711481|gb|EHT35712.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1750]
gi|377713240|gb|EHT37449.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1769]
gi|377715676|gb|EHT39863.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1835]
gi|377721138|gb|EHT45279.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG547]
gi|377721406|gb|EHT45538.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1096]
gi|377723840|gb|EHT47961.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1150]
gi|377729773|gb|EHT53856.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1213]
gi|377736617|gb|EHT60632.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1612]
gi|377739857|gb|EHT63857.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1770]
gi|377741345|gb|EHT65334.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG2018]
gi|377761469|gb|EHT85340.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC345D]
gi|377762455|gb|EHT86318.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC348]
gi|377768371|gb|EHT92154.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC93]
gi|377769295|gb|EHT93069.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC128]
gi|383364874|gb|EID42179.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-M]
gi|383971463|gb|EID87538.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus CO-23]
gi|385197056|emb|CCG16701.1| putative helicase [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|387716292|gb|EIK04351.1| hypothetical protein MQC_01722 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387716987|gb|EIK05022.1| hypothetical protein MQE_02589 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387717047|gb|EIK05073.1| hypothetical protein MQA_01557 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387723829|gb|EIK11540.1| hypothetical protein MQG_02595 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387725446|gb|EIK13060.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS5]
gi|387728589|gb|EIK16073.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS6]
gi|387733388|gb|EIK20572.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS8]
gi|387734873|gb|EIK22022.1| hypothetical protein MQM_02704 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387735068|gb|EIK22207.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS9]
gi|387742473|gb|EIK29288.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS10]
gi|387743010|gb|EIK29809.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387744154|gb|EIK30925.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS11b]
gi|394329036|gb|EJE55163.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|421955596|gb|EKU07932.1| Cold-shock DEAD-box protein A [Staphylococcus aureus CN79]
gi|436430653|gb|ELP28012.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus DSM 20231]
gi|436506489|gb|ELP42284.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21282]
gi|443405200|gb|ELS63809.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21236]
gi|443405702|gb|ELS64297.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21196]
gi|445547050|gb|ELY15324.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus
KT/314250]
gi|445563511|gb|ELY19670.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus KT/Y21]
Length = 506
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 134/247 (54%), Gaps = 54/247 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQ 194
Query: 410 DFRKKLK 416
F K K
Sbjct: 195 QFMKSPK 201
>gi|350632267|gb|EHA20635.1| hypothetical protein ASPNIDRAFT_190556 [Aspergillus niger ATCC
1015]
Length = 795
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 150/274 (54%), Gaps = 21/274 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W+E L LM+ I R+G+KEPTPIQ+A IP A D+IG A TGSGKT AF LP+
Sbjct: 358 SWDESNLPKRLMELINRVGYKEPTPIQRAAIPIAMQNR--DLIGVAVTGSGKTAAFLLPL 415
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + E + +E E G A+++ PTRELA Q+ K+ +
Sbjct: 416 LCYIAEL---------PRIDEFEWRKADGPY-AIVLAPTRELAQQIEIEAKKFTGPLGFN 465
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI
Sbjct: 466 VVSIVGGHSLEEQAYSLRDGAEIIIATPGRLVDCI---ERRILVLSQCCYVIMDEADRMI 522
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSATIALSAD- 410
+ G + I+D LP++N + + + ++ ++ Q + RQT++++AT+ + +
Sbjct: 523 DLGFEEPVNKILDALPVSNEKPDSEDAENPLAMSRHINHDQHRYRQTMMYTATMPTAVER 582
Query: 411 -FRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
RK L+ ++ S +++T+ +R M A
Sbjct: 583 IARKYLRRPAIVTIGSAG--EAVDTVEQRVEMIA 614
>gi|114046738|ref|YP_737288.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-7]
gi|113888180|gb|ABI42231.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-7]
Length = 409
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 43/232 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L LH L+ ++ LG+ +PTPIQ IPA K D++ A+TG+GKT AF LPI
Sbjct: 2 SFSALSLHSQLVNTLAELGYLQPTPIQVEAIPAIL--AKQDVMAGAQTGTGKTAAFALPI 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q+LL + E + APK +RAL++ PTRELA+QV + AKG ++R
Sbjct: 60 LQQLLLDNE-------------SQDAPK-DIRALVLVPTRELAVQVQQSFVKYAKGTDIR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V GG+S E Q+ KA ++++ TPGRL + + G ++ L LS V DEADRM+
Sbjct: 106 VGIAYGGVSIEAQQAEFKAGVDVLIATPGRLLDHLRQG---VLNLKYLSVLVFDEADRML 162
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G E+++++ +P +RQTL+FSAT+
Sbjct: 163 DMGFMDEIKAVLKQVP------------------------AQRQTLLFSATL 190
>gi|49484306|ref|YP_041530.1| helicase [Staphylococcus aureus subsp. aureus MRSA252]
gi|282904748|ref|ZP_06312622.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus C160]
gi|282906426|ref|ZP_06314277.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282920258|ref|ZP_06327982.1| ATP-dependent RNA helicase DeaD [Staphylococcus aureus subsp.
aureus C427]
gi|283958860|ref|ZP_06376305.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus A017934/97]
gi|295428668|ref|ZP_06821294.1| ATP-dependent RNA helicase DeaD [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|415684901|ref|ZP_11449930.1| putative helicase [Staphylococcus aureus subsp. aureus CGS00]
gi|417887143|ref|ZP_12531279.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21195]
gi|418565159|ref|ZP_13129574.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21264]
gi|418582899|ref|ZP_13146972.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1605]
gi|418600951|ref|ZP_13164400.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21345]
gi|418892594|ref|ZP_13446705.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1176]
gi|418898667|ref|ZP_13452734.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC341D]
gi|418901468|ref|ZP_13455519.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1214]
gi|418909906|ref|ZP_13463896.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG149]
gi|418918125|ref|ZP_13472079.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1267]
gi|418923794|ref|ZP_13477706.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1233]
gi|418983027|ref|ZP_13530731.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1242]
gi|418986647|ref|ZP_13534328.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1500]
gi|81650664|sp|Q6GEZ3.1|Y2168_STAAR RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SAR2168
gi|49242435|emb|CAG41149.1| putative helicase [Staphylococcus aureus subsp. aureus MRSA252]
gi|282316118|gb|EFB46499.1| ATP-dependent RNA helicase DeaD [Staphylococcus aureus subsp.
aureus C427]
gi|282330376|gb|EFB59894.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282594781|gb|EFB99758.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus C160]
gi|283789578|gb|EFC28401.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus A017934/97]
gi|295127338|gb|EFG56978.1| ATP-dependent RNA helicase DeaD [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|315193240|gb|EFU23638.1| putative helicase [Staphylococcus aureus subsp. aureus CGS00]
gi|341858415|gb|EGS99208.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21195]
gi|371974783|gb|EHO92099.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21264]
gi|374400368|gb|EHQ71483.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21345]
gi|377700704|gb|EHT25038.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1214]
gi|377702654|gb|EHT26974.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1242]
gi|377702762|gb|EHT27081.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1500]
gi|377709133|gb|EHT33404.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1605]
gi|377729734|gb|EHT53820.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1176]
gi|377732973|gb|EHT57022.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1233]
gi|377748968|gb|EHT72922.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1267]
gi|377749869|gb|EHT73808.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG149]
gi|377758226|gb|EHT82112.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC341D]
Length = 506
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 134/247 (54%), Gaps = 54/247 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQ 194
Query: 410 DFRKKLK 416
F K K
Sbjct: 195 QFMKSPK 201
>gi|418315814|ref|ZP_12927266.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21340]
gi|365242402|gb|EHM83109.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21340]
Length = 506
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|387603359|ref|YP_005734880.1| cold-shock deAd box protein a (atp-dependent rna helicasedead)
[Staphylococcus aureus subsp. aureus ST398]
gi|404479359|ref|YP_006710789.1| helicase [Staphylococcus aureus 08BA02176]
gi|418310467|ref|ZP_12922007.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21331]
gi|283471297|emb|CAQ50508.1| cold-shock deAd box protein a (atp-dependent rna helicasedead)
[Staphylococcus aureus subsp. aureus ST398]
gi|365236654|gb|EHM77538.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21331]
gi|404440848|gb|AFR74041.1| putative helicase [Staphylococcus aureus 08BA02176]
Length = 506
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|417898362|ref|ZP_12542283.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21259]
gi|341848722|gb|EGS89882.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21259]
Length = 506
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 134/247 (54%), Gaps = 54/247 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQ 194
Query: 410 DFRKKLK 416
F K K
Sbjct: 195 QFMKSPK 201
>gi|425738293|ref|ZP_18856558.1| hypothetical protein C273_07847 [Staphylococcus massiliensis S46]
gi|425479966|gb|EKU47136.1| hypothetical protein C273_07847 [Staphylococcus massiliensis S46]
Length = 495
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 49/215 (22%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 250
+GFKEPTPIQ IP A VDI+G A+TG+GKT AFG+P+++++++
Sbjct: 20 MGFKEPTPIQNDSIPYALE--GVDILGQAQTGTGKTGAFGIPLIEKVVD----------- 66
Query: 251 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL 310
K ++ALI+ PTRELA+QV + ++E +KG NV+V + GGM ++Q + L
Sbjct: 67 ----------KEGIQALILAPTRELAMQVAEQIREFSKGQNVQVATVFGGMPIDRQIKTL 116
Query: 311 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
K RP++VVGTPGR+ + + ++HTL +LDEAD M+ G +++ I+ LP
Sbjct: 117 KRRPKIVVGTPGRVIDHLDRRTLKTNDIHTL---ILDEADEMMNMGFIDDMRYIMSKLP- 172
Query: 371 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+++RQT++FSAT+
Sbjct: 173 ----------------------KEQRQTMLFSATM 185
>gi|223043911|ref|ZP_03613952.1| cold-shock deAd box protein a (atp-dependent rna helicasedead)
[Staphylococcus capitis SK14]
gi|314934151|ref|ZP_07841512.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
caprae C87]
gi|417906606|ref|ZP_12550387.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus capitis
VCU116]
gi|222442626|gb|EEE48730.1| cold-shock deAd box protein a (atp-dependent rna helicasedead)
[Staphylococcus capitis SK14]
gi|313653056|gb|EFS16817.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
caprae C87]
gi|341597608|gb|EGS40154.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus capitis
VCU116]
Length = 511
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 133/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDRTVQTLESMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG NV+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQNVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P S+Q RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------SDQ--------------RQTMLFSATM 185
>gi|156549811|ref|XP_001606554.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Nasonia
vitripennis]
Length = 456
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 140/277 (50%), Gaps = 65/277 (23%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
TEF +L + ++ + +G K+PTPIQ+ CIPA GK D IG A+TGSGKTLAF
Sbjct: 2 TEF---TDLNISSWIIDQLKLIGVKKPTPIQQNCIPAIL-SGK-DCIGCAKTGSGKTLAF 56
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 289
LPI+Q+L E+ P G + AL++TPTRELA Q+ D + K
Sbjct: 57 ALPILQKLSED-------------------PYG-IFALVLTPTRELAFQIGDQFAAIGKT 96
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS-----FF 344
IN++ IVGGM Q + L P +VV TPGRL + HL +T S F
Sbjct: 97 INLKKCTIVGGMDMVVQGQELARHPHIVVATPGRLAD-------HLESCNTFSLARIKFL 149
Query: 345 VLDEADRMIENGHFRE-LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 403
VLDEADR++ GHF E L I LP K RQ+L+FSA
Sbjct: 150 VLDEADRLL-GGHFDEQLSVIFKALP------------------------KNRQSLLFSA 184
Query: 404 TIALSADFRKKLKHGSLKLKQSVN--GLNSIETLSER 438
TI + D K++ + +S + G+ +++ L +R
Sbjct: 185 TITDALDKVKQVSTKEWFIWESTDDSGVATVKELDQR 221
>gi|357013855|ref|ZP_09078854.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
elgii B69]
Length = 433
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 132/232 (56%), Gaps = 45/232 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L P ++K++ + + +PTPIQ+ IP G+ D+ G A+TG+GKT AF LPI+
Sbjct: 3 FEQLKLIPPILKALAKENYTQPTPIQEQAIPPVL-AGR-DLFGCAQTGTGKTAAFLLPII 60
Query: 235 QRL-LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
Q L ++R +GK + +R+LI+TPTRELA+Q++D+ K + +N+R
Sbjct: 61 QLLSAQQRRPSGKRV---------------IRSLILTPTRELAIQISDNFKAYGRFLNLR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
IVGG+S + QE+ L+ ++++ TPGRL +LM+ G +L + VLDEADRM+
Sbjct: 106 SAVIVGGVSQKAQEQALEQGMDILIATPGRLIDLMNQG---FADLRHVQILVLDEADRML 162
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G +++ II LP KRQTL FSAT+
Sbjct: 163 DMGFIHDMRRIIAKLP------------------------AKRQTLFFSATM 190
>gi|428164262|gb|EKX33294.1| hypothetical protein GUITHDRAFT_81602 [Guillardia theta CCMP2712]
Length = 679
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 145/292 (49%), Gaps = 54/292 (18%)
Query: 159 EEELVSEAEI-STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIG 217
E E +A + S E ++ EL L L+K++ LGF +PT IQ IP A QGK D+
Sbjct: 98 EREYFDDAPVQSAETSSFQELHLSRPLLKAVSSLGFIKPTVIQSMVIPVAL-QGK-DVCA 155
Query: 218 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTREL 275
++ TGSGKT AF LPI++RLL Y P+ R L++TPTREL
Sbjct: 156 SSRTGSGKTAAFALPILERLL-------------------YRPRRVAATRVLVLTPTREL 196
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
A+Q ++++A ++R ++GG+ + QE L+ +P++VV TPGR+ + +
Sbjct: 197 AVQAHAMMEKLAAFTDIRCYIVIGGVKNQLQETELRKKPDVVVATPGRMIDHLRNAPG-- 254
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
+ L VLDEADR++E G E+Q ++ M P ++
Sbjct: 255 IGFEALEILVLDEADRLLEMGFTEEVQELVKMCP------------------------QQ 290
Query: 396 RQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAI 447
RQT++FSAT+ D KL SL+ V SI T E G VA+
Sbjct: 291 RQTMLFSATMTHDVD---KLAAFSLRRPVRVTADGSIRT-DETQGTLNKVAV 338
>gi|357601923|gb|EHJ63191.1| hypothetical protein KGM_14588 [Danaus plexippus]
Length = 829
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 141/239 (58%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W E H +M+ I ++G+K PTPIQ+ IP DIIG AETGSGKTL
Sbjct: 396 IPNPIRSWKEANFHEDIMEIISKVGYKSPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 453
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ ++ K +M E+A++ P A+I+ PTRELA Q+ + +
Sbjct: 454 AFLIPLLT-WIQSLPKNERM-----EDADQ-GPY----AIILAPTRELAQQIEEETNKFG 502
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 503 IPLGITSVVVVGGLSREEQGFKLRLGCEIVIATPGRLIDVLEN--RYLV-LNRCTYVVLD 559
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 405
EADRMI+ G ++Q I++ +P++N + + + + + + +KK RQT++F+AT+
Sbjct: 560 EADRMIDMGFEPDVQKILEYMPVSNIKPDTDAAEDASVLLANYNSKKKFRQTVMFTATM 618
>gi|170029482|ref|XP_001842621.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Culex
quinquefasciatus]
gi|167863205|gb|EDS26588.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Culex
quinquefasciatus]
Length = 815
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 143/241 (59%), Gaps = 17/241 (7%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
+I +W E +++ I ++G+KEPTPIQ+ IP DIIG AETGSGK
Sbjct: 380 GKIPNPIRSWKESGFPKEVLEIIDKVGYKEPTPIQRQAIPIGLQNR--DIIGIAETGSGK 437
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
TLAF +P++ + G E+ E A++ P A+I+ PTRELA Q+ + ++
Sbjct: 438 TLAFLIPLLNWI------QGLPKIERQETADQ-GPY----AIILAPTRELAQQIEEETQK 486
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ V
Sbjct: 487 FGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIV 543
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
+DEADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT
Sbjct: 544 MDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDATKLMENFNTKKKYRQTVMFTAT 603
Query: 405 I 405
+
Sbjct: 604 M 604
>gi|253731082|ref|ZP_04865247.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|297210100|ref|ZP_06926493.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|300910462|ref|ZP_07127914.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus TCH70]
gi|304379262|ref|ZP_07362001.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|384867000|ref|YP_005747196.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus TCH60]
gi|422743011|ref|ZP_16797007.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422745973|ref|ZP_16799908.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|424771982|ref|ZP_18199098.1| putative DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
aureus subsp. aureus CM05]
gi|253725209|gb|EES93938.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|296885300|gb|EFH24240.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|300888304|gb|EFK83495.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus TCH70]
gi|304342121|gb|EFM08021.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312437505|gb|ADQ76576.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus TCH60]
gi|320140748|gb|EFW32600.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143723|gb|EFW35500.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|402347512|gb|EJU82540.1| putative DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
aureus subsp. aureus CM05]
gi|408424041|emb|CCJ11452.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408426030|emb|CCJ13417.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408428018|emb|CCJ15381.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408430007|emb|CCJ27172.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408431993|emb|CCJ19308.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408433988|emb|CCJ21273.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408435980|emb|CCJ23240.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408437963|emb|CCJ25206.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
Length = 517
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 15 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 72
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 73 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 111
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 112 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 168
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 169 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 196
>gi|221141602|ref|ZP_03566095.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|384862733|ref|YP_005745453.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|302751962|gb|ADL66139.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus str. JKD6008]
Length = 506
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 134/247 (54%), Gaps = 54/247 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTILFSATMPKAIQALVQ 194
Query: 410 DFRKKLK 416
F K K
Sbjct: 195 QFMKSPK 201
>gi|117919611|ref|YP_868803.1| DEAD/DEAH box helicase [Shewanella sp. ANA-3]
gi|117611943|gb|ABK47397.1| DEAD/DEAH box helicase domain protein [Shewanella sp. ANA-3]
Length = 409
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 43/232 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L LH L+ ++ LG+++PTPIQ IPA K D++ A+TG+GKT AF LPI
Sbjct: 2 SFSALSLHSQLVNTLAELGYQQPTPIQIEAIPAIL--AKQDVMAGAQTGTGKTAAFALPI 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q+LL + E + APK +RAL++ PTRELA+QV + AKG ++R
Sbjct: 60 LQQLLIDNE-------------SQDAPK-DVRALVLVPTRELAVQVQQSFVKYAKGTDIR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V GG+S E Q+ KA ++++ TPGRL + + G + L LS V DEADRM+
Sbjct: 106 VGIAYGGVSIEAQQAEFKAGIDVLIATPGRLLDHLRQGA---LNLKRLSVLVFDEADRML 162
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G E+++++ +P +RQTL+FSAT+
Sbjct: 163 DMGFMDEIKAVLKQVP------------------------AQRQTLLFSATL 190
>gi|386729768|ref|YP_006196151.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
71193]
gi|418979357|ref|ZP_13527153.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
DR10]
gi|379992788|gb|EIA14238.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
DR10]
gi|384231061|gb|AFH70308.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
71193]
Length = 517
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 15 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 72
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 73 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 111
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 112 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 168
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 169 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 196
>gi|253733085|ref|ZP_04867250.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
TCH130]
gi|253728993|gb|EES97722.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
TCH130]
Length = 517
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 15 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 72
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 73 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 111
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 112 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 168
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 169 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 196
>gi|399926673|ref|ZP_10784031.1| DEAD/DEAH box helicase [Myroides injenensis M09-0166]
Length = 414
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 132/234 (56%), Gaps = 44/234 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L+ ++++I LG+KEPTPIQ+ IP + D+IG A+TG+GKT AF +PI+
Sbjct: 3 FEDLHLNKNILRAIEELGYKEPTPIQQKVIPLVLEEK--DLIGCAQTGTGKTAAFAMPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
L K G +K ++A + LIITPTRELALQ+ D+ + AK NV
Sbjct: 61 HYL----HKIGNT--KKAKKA---------KVLIITPTRELALQIHDNFTQYAKYTNVTS 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GGMS + Q L ++++GTPGRL +L +KHL +L +L + VLDEAD M++
Sbjct: 106 ITLYGGMSIKPQIEQLNKGADVIIGTPGRLLDLYK--QKHL-DLDSLHYLVLDEADLMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 408
G +++ +I + P SN RQTL+FSAT+ L+
Sbjct: 163 MGFIDDVKKLIQLTP----SN--------------------RQTLLFSATMPLA 192
>gi|363753372|ref|XP_003646902.1| hypothetical protein Ecym_5326 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890538|gb|AET40085.1| hypothetical protein Ecym_5326 [Eremothecium cymbalariae
DBVPG#7215]
Length = 757
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 151/307 (49%), Gaps = 50/307 (16%)
Query: 171 EFDAW-NELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
E AW N+++L ++++ +LGF PT IQ IP A +DI+G A TGSGKTLA+
Sbjct: 187 ELPAWSNKMKLSFFTLQALAKLGFTSPTEIQVQSIPKALE--GLDIMGKASTGSGKTLAY 244
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV--- 286
G+PI++RL AL+ TPTRELA QVT HL+ V
Sbjct: 245 GIPILERLFASTNDKP-------------------IALVFTPTRELAHQVTTHLQNVLGN 285
Query: 287 -AKGINVRVVPIVGGMSTEKQERLL--KARPELVVGTPGRLWELMSGGEKHLVELHTLSF 343
K + ++ + GG+S +KQERLL + +VV TPGR EL+ E + +
Sbjct: 286 LVKKMPYAILSLTGGLSIQKQERLLDYEGSSRIVVATPGRFLELLEKNEDLIKRFAEIGV 345
Query: 344 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 403
VLDEADR++++GHF E + I L EQ +L+ +K QT++ SA
Sbjct: 346 LVLDEADRLLQDGHFDEFEKIFKHL---------NREQ-------KTLKSEKWQTMILSA 389
Query: 404 TIALSADFRKKLKHGSLKLKQSVNGLNSIET----LSERAGMRANVAIVDLTNVSVLANK 459
T S D KL K ++ N +E L + ++ I+D S + +
Sbjct: 390 T--FSIDLFSKLSTTHWKNLKNNKENNEMEAVLKHLMTKISFKSKPVIIDTNPESKITAQ 447
Query: 460 LEESFIE 466
++ES IE
Sbjct: 448 VKESLIE 454
>gi|297589855|ref|ZP_06948495.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus MN8]
gi|297576983|gb|EFH95697.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus MN8]
Length = 517
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 15 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 72
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 73 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 111
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 112 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 168
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 169 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 196
>gi|392597372|gb|EIW86694.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 750
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 148/313 (47%), Gaps = 68/313 (21%)
Query: 98 SSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDD 157
S ED G DED G Q ++ +L+ Q K +K+ E+S T + P
Sbjct: 128 SGERSEDFGSASSDEDDEG-QSDEVSDLETQAEKDRKRA-------FFEDSDTTT--PAH 177
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIG 217
A ++ + L L K++ LGF +PTPIQ A IP A GK DI+G
Sbjct: 178 A---------------SFLTMNLSRPLQKALTTLGFNKPTPIQVAAIPVALI-GK-DIVG 220
Query: 218 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELAL 277
A TGSGKT AF +P+++RLL EKG+ A R LI+ PTREL +
Sbjct: 221 NAVTGSGKTAAFVIPMLERLL---------YREKGKSA------AATRCLILVPTRELGV 265
Query: 278 QVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 337
Q + +++A + R+ +VGG+S + QE L+ RP++V+ TPGRL + +
Sbjct: 266 QCYEVAQKLAAYTDARIALVVGGLSLKSQEAALRTRPDVVIATPGRLVDHIHNSPS--FN 323
Query: 338 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 397
L L VLDEADRM+ G EL II P K RQ
Sbjct: 324 LDALDILVLDEADRMLSEGFADELSEIIKACP------------------------KSRQ 359
Query: 398 TLVFSATIALSAD 410
T++FSAT+ S D
Sbjct: 360 TMLFSATMTDSVD 372
>gi|257426220|ref|ZP_05602635.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428878|ref|ZP_05605272.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257431487|ref|ZP_05607860.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257434197|ref|ZP_05610547.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus E1410]
gi|257437110|ref|ZP_05613150.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus M876]
gi|282914927|ref|ZP_06322707.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus M899]
gi|282925469|ref|ZP_06333123.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus C101]
gi|293508999|ref|ZP_06667786.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510911|ref|ZP_06669610.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus M809]
gi|293547513|ref|ZP_06672188.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus M1015]
gi|257270925|gb|EEV03098.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257274220|gb|EEV05737.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257277728|gb|EEV08398.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257280836|gb|EEV10981.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus E1410]
gi|257283503|gb|EEV13630.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus M876]
gi|282312870|gb|EFB43271.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus C101]
gi|282321130|gb|EFB51461.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus M899]
gi|290919633|gb|EFD96706.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus M1015]
gi|291094703|gb|EFE24975.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466196|gb|EFF08723.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus M809]
Length = 506
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 131/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++L K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 EKVL---------------------GKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|194880138|ref|XP_001974373.1| GG21122 [Drosophila erecta]
gi|190657560|gb|EDV54773.1| GG21122 [Drosophila erecta]
Length = 816
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 144/239 (60%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W+E ++ I ++G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 383 IPNPIRSWSESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 440
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 441 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFG 489
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 490 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 546
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F+AT+
Sbjct: 547 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATM 605
>gi|449665189|ref|XP_004206086.1| PREDICTED: ATP-dependent RNA helicase DDX24-like, partial [Hydra
magnipapillata]
Length = 403
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 115/199 (57%), Gaps = 30/199 (15%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L ALI+TPTRELA+Q+ +HL +AK ++ +VGG++ KQERLL PE+V+GTPGR
Sbjct: 23 LFALILTPTRELAIQIQNHLNCIAKYTDLSCFAVVGGLAQPKQERLLSKFPEIVIGTPGR 82
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
L++L+ G+ HL + ++ F V+DE DRM+E GHF+EL+ ++
Sbjct: 83 LYKLIKDGDPHLNKFESIKFLVIDECDRMLEFGHFKELEELM------------------ 124
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
C+ SS R RQT VFSAT+ L +KH K+ N + ++ L ++ G+
Sbjct: 125 -CIINSSQNR--RQTFVFSATLTLP------VKH---KIYSKKNEVTQMQQLVDKIGLNH 172
Query: 444 NVAIVDLTNVSVLANKLEE 462
++DLT V A+ L +
Sbjct: 173 KAKVIDLTTKQVTASLLRQ 191
>gi|170040294|ref|XP_001847939.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167863866|gb|EDS27249.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 818
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 143/241 (59%), Gaps = 17/241 (7%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
+I +W E +++ I ++G+KEPTPIQ+ IP DIIG AETGSGK
Sbjct: 383 GKIPNPIRSWKESGFPKEVLEIIDKVGYKEPTPIQRQAIPIGLQNR--DIIGIAETGSGK 440
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
TLAF +P++ + G E+ E A++ P A+I+ PTRELA Q+ + ++
Sbjct: 441 TLAFLIPLLNWI------QGLPKIERQETADQ-GPY----AIILAPTRELAQQIEEETQK 489
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ V
Sbjct: 490 FGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIV 546
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
+DEADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT
Sbjct: 547 MDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDATKLMENFNTKKKYRQTVMFTAT 606
Query: 405 I 405
+
Sbjct: 607 M 607
>gi|289550302|ref|YP_003471206.1| cold-shock DEAD-box protein A [Staphylococcus lugdunensis HKU09-01]
gi|315660238|ref|ZP_07913093.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
lugdunensis M23590]
gi|385783930|ref|YP_005760103.1| putative helicase [Staphylococcus lugdunensis N920143]
gi|418415253|ref|ZP_12988459.1| hypothetical protein HMPREF9308_01624 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418635602|ref|ZP_13197976.1| DEAD/DEAH box helicase [Staphylococcus lugdunensis VCU139]
gi|289179834|gb|ADC87079.1| Cold-shock DEAD-box protein A [Staphylococcus lugdunensis HKU09-01]
gi|315494665|gb|EFU83005.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
lugdunensis M23590]
gi|339894186|emb|CCB53451.1| putative helicase [Staphylococcus lugdunensis N920143]
gi|374841707|gb|EHS05164.1| DEAD/DEAH box helicase [Staphylococcus lugdunensis VCU139]
gi|410875260|gb|EKS23185.1| hypothetical protein HMPREF9308_01624 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 504
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L + ++++ +GFKEPTPIQK IP A +G+ DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKDLGISEKTVQTLENMGFKEPTPIQKDSIPYAL-EGR-DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G NV+V
Sbjct: 62 ---------------------EKVVNKSGVQSLILAPTRELAMQVAEQLREFSRGQNVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM ++Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIDRQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|195484183|ref|XP_002090584.1| GE13195 [Drosophila yakuba]
gi|194176685|gb|EDW90296.1| GE13195 [Drosophila yakuba]
Length = 821
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 144/239 (60%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W+E ++ I ++G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 388 IPNPIRSWSESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 445
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 446 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFG 494
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 495 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 551
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 405
EADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F+AT+
Sbjct: 552 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATM 610
>gi|346979571|gb|EGY23023.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Verticillium
dahliae VdLs.17]
Length = 683
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 128/232 (55%), Gaps = 18/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E L L+ ++R+G+ EPTPIQ+A IP A D+IG A TGSGKT +F LP++
Sbjct: 260 WDESGLPSRLLDIVHRVGYNEPTPIQRAAIPIALQA--RDLIGVAVTGSGKTASFLLPLL 317
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ + L GE + P G LI+ PTREL Q+ + A + RV
Sbjct: 318 VYISD--------LPPLGEMNKNDGPYG----LILAPTRELVQQIESEANKFATPLGFRV 365
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 366 VSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCI---ERRLLVLGQCCYVIMDEADRMID 422
Query: 355 NGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G + I+D LP+TN + ++E Q + + RQT++++AT+
Sbjct: 423 LGFEEPVNKILDALPVTNEKPDTDEAENAQLMKRYLGGKDRYRQTMMYTATM 474
>gi|255711296|ref|XP_002551931.1| KLTH0B03278p [Lachancea thermotolerans]
gi|238933309|emb|CAR21493.1| KLTH0B03278p [Lachancea thermotolerans CBS 6340]
Length = 739
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 162/318 (50%), Gaps = 64/318 (20%)
Query: 97 RSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPD 156
+S+ +E D D +GDE G + G + K+ +G++ + +VS+ D
Sbjct: 149 QSATHEGDATDSEGDESG----------VDEDSGVESDKQTEGQEALMTAGNGSVSDIED 198
Query: 157 DAEE---ELVSEAEISTE-----FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAA 208
D+EE E + E STE +N L L ++K + L + +P+PIQ A IP A
Sbjct: 199 DSEEAKAEFYALEEESTEAKKTVHTNFNSLSLSRPVLKGLGALNYVKPSPIQSATIPIAL 258
Query: 209 HQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALI 268
GK DII A TGSGKT A+ +PI++RLL K A R ++
Sbjct: 259 -LGK-DIIAGAVTGSGKTAAYMIPIIERLLY-----------------KPAQIASTRVIV 299
Query: 269 ITPTRELALQVTDHLKEVAKGIN-VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWEL 327
+TPTRELA+QV+D ++AK +N + VGG++ +QE+ L++RP++V+ TPGRL +
Sbjct: 300 LTPTRELAIQVSDVGAKLAKFVNGISFGLAVGGLNLRQQEQTLRSRPDIVIATPGRLIDH 359
Query: 328 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT 387
+ V+ ++ V+DEADRM+E G EL I+ ++P
Sbjct: 360 IRNSASFNVD--SVEILVIDEADRMLEEGFQDELNEIMSLIP------------------ 399
Query: 388 VSSLQRKKRQTLVFSATI 405
KRQTL+FSAT+
Sbjct: 400 ------SKRQTLLFSATM 411
>gi|328865714|gb|EGG14100.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 1076
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 125/239 (52%), Gaps = 56/239 (23%)
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
+ LH L K++ + GFK+PTPIQ+ IP +G+ D++G A TGSGKT AF +P++Q+L
Sbjct: 273 MDLHKFLFKAVMKKGFKQPTPIQRLTIPLIL-EGQ-DVVGMARTGSGKTAAFVIPMIQKL 330
Query: 238 LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
+ K G RA+I++PTRELALQ +KE++ G ++R I
Sbjct: 331 AQHSHKVG------------------ARAIILSPTRELALQTYRVVKELSSGSDLRSCVI 372
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE----LHTLSFFVLDEADRMI 353
VGG + Q L P++++ TPGRL HL E LHT+ + V DEADR+
Sbjct: 373 VGGDNMADQFTELARNPDIIIATPGRLVH-------HLTEVNMGLHTVQYIVFDEADRLF 425
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-ALSADF 411
E G +LQ II L + RQTL+FSAT+ ++ A+F
Sbjct: 426 EMGFADQLQEIITKLSPS------------------------RQTLLFSATLPSMLAEF 460
>gi|350272013|ref|YP_004883321.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
gi|348596855|dbj|BAL00816.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
Length = 435
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 125/231 (54%), Gaps = 48/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K++ R G+ PTPIQ+ IP K D+IG A+TG+GKT AF LPI+
Sbjct: 3 FKELNLTAPILKAVDRQGYTTPTPIQQKAIPILLQ--KRDLIGCAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L ER K ++ALI+TPTRELA+Q+ ++ + + +R
Sbjct: 61 QNLASERRKG-------------------IKALILTPTRELAIQIQENFEHYGTHLPLRC 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S Q L+ ++++ TPGRL +L++ G V++ + FVLDEADRM++
Sbjct: 102 TVIFGGVSQVPQVERLRRGVDILIATPGRLCDLINQG---YVDISQIEVFVLDEADRMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G R+++ +++ LP KKRQTL+FSAT+
Sbjct: 159 MGFIRDVKKVLNALP------------------------KKRQTLLFSATM 185
>gi|284037338|ref|YP_003387268.1| DEAD/DEAH box helicase [Spirosoma linguale DSM 74]
gi|283816631|gb|ADB38469.1| DEAD/DEAH box helicase domain protein [Spirosoma linguale DSM 74]
Length = 485
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 124/231 (53%), Gaps = 42/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L ++K++ G+ PTPIQ+ IP + D++G A+TG+GKT AF +PI+
Sbjct: 3 FSELSLIDPILKALTEEGYTNPTPIQEKAIPILL--SRRDLLGCAQTGTGKTAAFAIPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L EER K+ P+ ++ LI+TPTRELA+Q+ + + +N+R
Sbjct: 61 QLLSEERSKSTG------------GPR-RIKTLILTPTRELAIQIAESFTAYGRHLNIRN 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S Q LKA ++++ TPGRL +LM+ G + L + FFVLDEADRM++
Sbjct: 108 TVIFGGVSQHSQVNTLKAGVDVLIATPGRLLDLMNQG---FISLRDVQFFVLDEADRMLD 164
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ +I LP RQ+L FSAT+
Sbjct: 165 MGFIHDVKKVITKLPT------------------------HRQSLFFSATM 191
>gi|449484526|ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
21-like [Cucumis sativus]
Length = 715
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 131/240 (54%), Gaps = 24/240 (10%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
++I +W E +L L+K++ R G+K P+PIQ A IP Q D+IG AETGSGK
Sbjct: 288 SKIPRPMRSWTESKLTTELLKAVERAGYKSPSPIQMAAIPLGLQQR--DVIGIAETGSGK 345
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 346 TAAFVLPMLAYITR--------LPPINEENEAEGPY----AVVMAPTRELAQQIEDETVK 393
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ V
Sbjct: 394 FSHYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCL---ERRYAVLNQCNYVV 450
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
LDEADRMI+ G ++ ++D +P +N E + E+ ++ R T +FSAT+
Sbjct: 451 LDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDE-------KKXYRTTYMFSATM 503
>gi|340375196|ref|XP_003386122.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Amphimedon
queenslandica]
Length = 804
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 135/233 (57%), Gaps = 18/233 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E L + I LG+KEPT IQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 375 WSEGGLPEKITDVIRGLGYKEPTAIQRQAIPIGLQNR--DIIGIAETGSGKTAAFVIPLL 432
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K++ E + YA +I+ PTRELA Q+ + + AK ++VR
Sbjct: 433 VWVTS----LPKIVREADVDQGPYA-------IILAPTRELAQQIEEETMKFAKPLDVRT 481
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 482 VSLVGGLSREEQGFQLRLGCEIVIATPGRLIDVLEN--RYLV-LSQCTYIVLDEADRMID 538
Query: 355 NGHFRELQSIIDMLPMTN--GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G E+Q I+ LP++N ++ + T+ V ++S + RQT++F+AT+
Sbjct: 539 MGFEPEVQKILAHLPVSNMKPDSDDAEDPTKMLVGINSSHHRYRQTVMFTATM 591
>gi|322796322|gb|EFZ18887.1| hypothetical protein SINV_00745 [Solenopsis invicta]
Length = 420
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 124/240 (51%), Gaps = 50/240 (20%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
L+L+ L+ +G K+PTPIQ+ CIP G+ D IG A+TGSGKTLAF LPI+Q+
Sbjct: 10 HLKLNSWLLAQCKSMGLKKPTPIQENCIPRIL-MGE-DCIGCAKTGSGKTLAFALPILQK 67
Query: 237 LLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
L E+ P G + AL++TPTRELA Q+ D + K IN++
Sbjct: 68 LCED-------------------PYG-IFALVLTPTRELAFQIADQFAAIGKVINLKKCV 107
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 356
IVGGM Q L RP +VV TPGRL + + L + F VLDEADR++ G
Sbjct: 108 IVGGMDMMIQGLELSKRPHIVVATPGRLADHLDSCNTF--SLQKIKFLVLDEADRLL-GG 164
Query: 357 HF-RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 415
HF ++L+ I +LP K++Q L FSAT+ + D KK+
Sbjct: 165 HFDKQLKKIFAVLP------------------------KQKQILFFSATMTDTLDKVKKM 200
>gi|443729582|gb|ELU15447.1| hypothetical protein CAPTEDRAFT_224580 [Capitella teleta]
Length = 648
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 136/232 (58%), Gaps = 17/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E ++ L+ I ++G+ EPTPIQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 221 WRESKICTELLDIIEKIGYTEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFLIPLL 278
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ G E+ E+A+ Y P ALI+ PTRELA Q+ + + ++
Sbjct: 279 TWI------QGLPKIERMEDAD-YGP----YALILAPTRELAQQIEEETIRFGGPLGMKT 327
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG+S E+Q L+ E+V+ TPGRL +++ K+LV LH ++ VLDEAD+MI
Sbjct: 328 VAVIGGLSREEQGFKLRQGCEVVIATPGRLIDVLEN--KYLV-LHRCTYVVLDEADKMIN 384
Query: 355 NGHFRELQSIIDMLPMTNGSNEG-QSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G E+Q+I+ LP+TN + ++E + ++ + K RQT++F+AT+
Sbjct: 385 MGFEPEVQNILKFLPVTNEKPDSEEAEDAEFLLSNFMSKNKFRQTVMFTATM 436
>gi|427721123|ref|YP_007069117.1| DEAD/DEAH box helicase [Calothrix sp. PCC 7507]
gi|427353559|gb|AFY36283.1| DEAD/DEAH box helicase domain protein [Calothrix sp. PCC 7507]
Length = 438
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 128/233 (54%), Gaps = 41/233 (17%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L L +++++ LG+ +PTPIQK IP G D++ A+TG+GKT +F LP+
Sbjct: 2 SFSNLGLSNEIIRAVTELGYTKPTPIQKQAIPVILSGG--DLLAGAQTGTGKTASFTLPL 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ RL + K+ + Y P +RALI+TPTRELA QV ++E K +N+
Sbjct: 60 LHRLSNDSVKS---------TSNPYPP---IRALILTPTRELAAQVESSVREYGKYLNLN 107
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ + GG+S Q+RLLK R +++V TPGRL + + G V L + VLDEADRM+
Sbjct: 108 TMAMFGGVSINPQKRLLKGRVDILVATPGRLLDHVQQGT---VNLSHVEVLVLDEADRML 164
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G R+++ I+ +LP K+RQ L+F AT +
Sbjct: 165 DMGFIRDIRRILSLLP------------------------KQRQNLLFFATFS 193
>gi|241957775|ref|XP_002421607.1| ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
[Candida dubliniensis CD36]
gi|223644951|emb|CAX40951.1| ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
[Candida dubliniensis CD36]
Length = 592
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 135/254 (53%), Gaps = 49/254 (19%)
Query: 155 PDDAEEELVSEAEISTE--FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
P+D EE+ + E ST ++ L+L ++K I L F +PTPIQ A IP A GK
Sbjct: 94 PEDTPEEIANFYEQSTHQSHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIAL-LGK 152
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
DI+ A+TGSGKT A+ +PI++RLL Y P + +I+TPT
Sbjct: 153 -DIVAGAQTGSGKTGAYMIPIIERLL-------------------YKPSTSTKVIILTPT 192
Query: 273 RELALQVTDHLKEVAKGIN-VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
RELALQV + K+++ +N + + VGG++ +QE LK RP++V+ TPGRL + +
Sbjct: 193 RELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNS 252
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 391
V+ + V+DEADRM+E G EL I+ ++P
Sbjct: 253 PSFSVQ--DIQVLVIDEADRMLEEGFQEELTEILSLIP---------------------- 288
Query: 392 QRKKRQTLVFSATI 405
+ KRQTL+FSAT+
Sbjct: 289 -KHKRQTLLFSATM 301
>gi|242022378|ref|XP_002431617.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative
[Pediculus humanus corporis]
gi|212516925|gb|EEB18879.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative
[Pediculus humanus corporis]
Length = 788
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 140/232 (60%), Gaps = 17/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E ++ ++ I R+G+ E TPIQ+ IP DIIG AETGSGKTLAF +P++
Sbjct: 362 WKEAKIPQEILDIIERVGYTEATPIQRQAIPIGLQNR--DIIGVAETGSGKTLAFLIPLI 419
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ K +M E+A++ P A+I+ PTRELA Q+ + + + +R
Sbjct: 420 M-WIQSLPKIQRM-----EDADQ-GPY----AIILAPTRELAQQIEEETNKFGNPLGIRT 468
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 469 VVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMID 525
Query: 355 NGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++Q I++ +P+TN + ++E + + + ++K RQT++F+AT+
Sbjct: 526 MGFEPDVQKILEYMPVTNLKPDTEEAEDDKFLLANYNSKKKYRQTVMFTATM 577
>gi|410659385|ref|YP_006911756.1| Cold-shock DEAD-box protein A [Dehalobacter sp. DCA]
gi|410662371|ref|YP_006914742.1| Cold-shock DEAD-box protein A [Dehalobacter sp. CF]
gi|409021740|gb|AFV03771.1| Cold-shock DEAD-box protein A [Dehalobacter sp. DCA]
gi|409024727|gb|AFV06757.1| Cold-shock DEAD-box protein A [Dehalobacter sp. CF]
Length = 471
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 141/257 (54%), Gaps = 54/257 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E+ L +L ++I +GF+E TPIQ+ IP +GK DIIG A+TG+GKT AFG+P++
Sbjct: 4 FFEIGLSSVLTQAISEMGFEETTPIQERTIPLVL-EGK-DIIGQAQTGTGKTAAFGIPMI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+R+ +RE ++AL++TPTRELA+QV + L + + VR
Sbjct: 62 ERMKPDRES--------------------IKALVVTPTRELAIQVAEELNRIGQFKGVRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG ++Q R L+ RP+++VGTPGRL + M + + L + VLDEAD M+
Sbjct: 102 LPIYGGQDIDRQIRSLRNRPQIIVGTPGRLMDHM---RRRTIRLQQVETVVLDEADEMLS 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++++I+ +P ++RQTL+FSAT+ L+
Sbjct: 159 MGFVEDIENILKEVP------------------------EQRQTLLFSATMPKSILDLAQ 194
Query: 410 DFRKKLKHGSLKLKQSV 426
F + ++ S+K K+ +
Sbjct: 195 RFMQNPEYISMKTKEII 211
>gi|302915827|ref|XP_003051724.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732663|gb|EEU46011.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 714
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 127/232 (54%), Gaps = 18/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L P L+ + ++G+KEPTPIQ+A IP A D+IG A TGSGKT AF LP++
Sbjct: 280 WRESNLPPRLLSVVDQVGYKEPTPIQRAAIPIALQ--ARDLIGVAVTGSGKTAAFLLPLL 337
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ + LE+ + YA LI+ PTREL Q+ K+ A+ + R
Sbjct: 338 VYISDL-----PPLEDHNKNDGPYA-------LILAPTRELVQQIETEAKKFAEPLGFRC 385
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 386 VSIVGGHSLEEQAYALRNGAEIIVATPGRLVDCI---ERRLLVLGQCCYVIMDEADRMID 442
Query: 355 NGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G + I+D LP++N + +E Q + RQT++++AT+
Sbjct: 443 LGFEESVNKILDALPVSNEKPDTDDAENAQLMKRYLGGNDRYRQTMMYTATM 494
>gi|196001667|ref|XP_002110701.1| hypothetical protein TRIADDRAFT_50105 [Trichoplax adhaerens]
gi|190586652|gb|EDV26705.1| hypothetical protein TRIADDRAFT_50105 [Trichoplax adhaerens]
Length = 722
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 133/239 (55%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I AW+E L L+ I L + EPTPIQ+ IP DIIG AETGSGKT
Sbjct: 288 IPNPLRAWSESELSKELLDIISDLKYNEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 345
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K++ E + YA +I+ PTRELA Q+ +
Sbjct: 346 AFLIPLLVWIT----SLPKIVREADIDQGPYA-------IIMAPTRELAQQIEEEAARFG 394
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG++ E+Q LL+ E+V+ TPGRL +++ +LV L+ ++ VLD
Sbjct: 395 KPVGIRTVAVIGGLNREEQGFLLRQGCEIVIATPGRLLDVLDNS--YLV-LNQCTYVVLD 451
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS-SLQRKKRQTLVFSATI 405
EADRMI+ G ++QSI++ LP++N + Q + + + + RQT++F+AT+
Sbjct: 452 EADRMIDMGFEPDVQSILEYLPVSNQKPDTDDAQDPNKIRLKLGDKNRYRQTVMFTATM 510
>gi|257064977|ref|YP_003144649.1| DNA/RNA helicase [Slackia heliotrinireducens DSM 20476]
gi|256792630|gb|ACV23300.1| DNA/RNA helicase, superfamily II [Slackia heliotrinireducens DSM
20476]
Length = 657
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 129/237 (54%), Gaps = 49/237 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++E L + ++Y LG++EPTPIQ+ IP +G+ D+I AA+TG+GKT AF LP M
Sbjct: 9 FDESGLSATALAAVYDLGYEEPTPIQQQAIPVVL-EGR-DLIAAAKTGTGKTAAFALPTM 66
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALII-TPTRELALQVTDHLKEVAKGINVR 293
+L YA KG ++I TPTRELA+Q+++ + +AK N R
Sbjct: 67 DKL-------------------PYAGKGEGPVMVIVTPTRELAMQISEVCETIAKRTNHR 107
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VV ++GG+S Q + L++ ++++ TPGRL +LM +H +L + VLDEADRM+
Sbjct: 108 VVTLLGGVSYTPQIKKLRSGCDIIIATPGRLLDLM---RQHEADLDLVQVLVLDEADRML 164
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
+ G + ++ I+D P +RQTL+FSATI S D
Sbjct: 165 DMGFWPQVSEIVDATP------------------------SERQTLLFSATIDRSQD 197
>gi|372270527|ref|ZP_09506575.1| ATP-dependent DEAD/DEAH box helicase [Marinobacterium stanieri S30]
Length = 460
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 128/237 (54%), Gaps = 50/237 (21%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLA 228
+F+ + EL LH L+K+I +LGF +PTP+Q +P A H D+I AETGSGKTLA
Sbjct: 5 DFNVFAELMLHERLLKAIDKLGFTQPTPVQLETLPEALAGH----DLIVGAETGSGKTLA 60
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 288
F P++Q L+ +P R LI+TPTRELA QV +K++A
Sbjct: 61 FVAPMLQHFLD-----------------TPSPNTGTRGLILTPTRELAEQVCQSVKDLAA 103
Query: 289 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
V V+ + GG ++Q ++ PE++V TPGRL E + E+ ++L L + VLDE
Sbjct: 104 FTRVNVMTVCGGTGFKEQAAEMRKNPEVLVATPGRLAEHL---ERQTLDLDDLEYLVLDE 160
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
ADRM++ G E+ +I+D+ C R +RQ++VFSAT+
Sbjct: 161 ADRMLDMGFRDEVMAIVDI-----------------C-------RPQRQSMVFSATL 193
>gi|389751392|gb|EIM92465.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 812
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 130/249 (52%), Gaps = 43/249 (17%)
Query: 162 LVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAET 221
S+A S ++ + L ++K++ LGF PTPIQ A IP GK D++G A T
Sbjct: 203 FASDAPSSDTHSSFLTMNLSRPVLKALTTLGFNTPTPIQAATIPVGL-LGK-DVVGNAVT 260
Query: 222 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 281
GSGKT AF +P+++RLL +KG++A R LI+ PTRELA+Q +
Sbjct: 261 GSGKTAAFIIPMIERLL---------YRDKGKKA------AATRCLILVPTRELAVQCYE 305
Query: 282 HLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 341
K++ +++ IVGG+S + QE L+ARP++V+ TPGRL + + L L
Sbjct: 306 VGKKLGTHTDIQFCLIVGGLSLKSQEVALRARPDVVIATPGRLIDHLRNSPS--FTLDAL 363
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 401
VLDEADRM+ +G EL II Q+C T RQT++F
Sbjct: 364 DILVLDEADRMLSDGFADELTEII-----------------QSCPT-------SRQTMLF 399
Query: 402 SATIALSAD 410
SAT+ S D
Sbjct: 400 SATMTDSVD 408
>gi|384249200|gb|EIE22682.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 662
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 133/248 (53%), Gaps = 47/248 (18%)
Query: 160 EELVSEAEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIG 217
E+ ++ T+F A +++L L L+K+ LG+ PTPIQ ACIP A G+ DI G
Sbjct: 102 EDFYAQTPDGTKFSASAFSDLHLSRPLLKACTALGYINPTPIQAACIPLAL-AGR-DICG 159
Query: 218 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELAL 277
+A TGSGKT AF LP+++RLL + A Y L++TPTRELA+
Sbjct: 160 SAITGSGKTAAFALPLLERLLFRNRRI----------AATYG-------LVLTPTRELAV 202
Query: 278 QVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 337
QV + +A+ ++R+ +VGG+S + Q L+ PE+VV TPGRL + + + V
Sbjct: 203 QVHSMITNLAQFTDIRIALVVGGLSLQVQSATLRTSPEVVVATPGRLIDHLRNTQS--VG 260
Query: 338 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 397
L L VLDEADR+++ G E++ ++ + P +KRQ
Sbjct: 261 LEDLQALVLDEADRLLQMGFSEEIKEVLRLTP------------------------RKRQ 296
Query: 398 TLVFSATI 405
TL+FSAT+
Sbjct: 297 TLLFSATM 304
>gi|261418549|ref|YP_003252231.1| DEAD/DEAH box helicase [Geobacillus sp. Y412MC61]
gi|297528577|ref|YP_003669852.1| DEAD/DEAH box helicase [Geobacillus sp. C56-T3]
gi|319765363|ref|YP_004130864.1| DEAD/DEAH box helicase [Geobacillus sp. Y412MC52]
gi|448236523|ref|YP_007400581.1| DEAD-box ATP-dependent RNA helicase [Geobacillus sp. GHH01]
gi|261375006|gb|ACX77749.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. Y412MC61]
gi|297251829|gb|ADI25275.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. C56-T3]
gi|317110229|gb|ADU92721.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. Y412MC52]
gi|445205365|gb|AGE20830.1| DEAD-box ATP-dependent RNA helicase [Geobacillus sp. GHH01]
Length = 467
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L +MK+I R+GF+E TPIQ IP + Q K D+IG A+TG+GKT AFG+PI+
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSL-QNK-DVIGQAQTGTGKTAAFGIPIV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ G ++AL++ PTRELA+QV++ L ++ VRV
Sbjct: 62 EKV--------------------DVKNGAIQALVVAPTRELAIQVSEELYKIGAVKRVRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG E+Q R LK P ++VGTPGR+ + ++ G L +HT+ VLDEAD M+
Sbjct: 102 LPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTV---VLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P +RQTL+FSAT+
Sbjct: 159 MGFIEDIEAILSHVP------------------------AERQTLLFSATM 185
>gi|449455778|ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Cucumis
sativus]
Length = 715
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 132/242 (54%), Gaps = 28/242 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
++I +W E +L L+K++ R G+K P+PIQ A IP Q D+IG AETGSGK
Sbjct: 288 SKIPRPMRSWTESKLTTELLKAVERAGYKSPSPIQMAAIPLGLQQR--DVIGIAETGSGK 345
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 346 TAAFVLPMLAYITR--------LPPINEENEAEGPY----AVVMAPTRELAQQIEDETVK 393
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ V
Sbjct: 394 FSHYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCL---ERRYAVLNQCNYVV 450
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSA 403
LDEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSA
Sbjct: 451 LDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSA 501
Query: 404 TI 405
T+
Sbjct: 502 TM 503
>gi|260823718|ref|XP_002606227.1| hypothetical protein BRAFLDRAFT_287109 [Branchiostoma floridae]
gi|229291567|gb|EEN62237.1| hypothetical protein BRAFLDRAFT_287109 [Branchiostoma floridae]
Length = 564
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 134/239 (56%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I W E L + I LG+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 199 IPNPLRTWKEASLTDEIDSIIKDLGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 256
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + E K++ + + YA +I+ PTRELA Q+ + +
Sbjct: 257 AFLIPLLIWI----ESLPKIVRNEDADQGPYA-------IILAPTRELAQQIEEETLKFG 305
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ V+D
Sbjct: 306 RRLGIRTVAVIGGLSREDQGFKLRMGCEIVIATPGRLIDVLEN--RYLV-LSQCTYVVMD 362
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGS-NEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EADRMI+ G ++Q I++ LP+TN + ++E + S + K RQT++F+AT+
Sbjct: 363 EADRMIDMGFEPDVQKILEYLPVTNQKPDTEEAEDVEKLKANFSTKNKYRQTVMFTATM 421
>gi|224135589|ref|XP_002322111.1| predicted protein [Populus trichocarpa]
gi|222869107|gb|EEF06238.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 133/242 (54%), Gaps = 28/242 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
++I +W E +L L+K++ R+ +K+P+PIQ A IP Q D+IG AETGSGK
Sbjct: 283 SKIPRPMRSWAESKLSSELLKAVERVVYKKPSPIQMAAIPLGLQQR--DVIGIAETGSGK 340
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 341 TCAFVLPMLTYI--------SRLPPMSEENEAEGPY----AVVMAPTRELAQQIEDETVK 388
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
A + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ V
Sbjct: 389 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVV 445
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSA 403
LDEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSA
Sbjct: 446 LDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSA 496
Query: 404 TI 405
T+
Sbjct: 497 TM 498
>gi|449551073|gb|EMD42037.1| hypothetical protein CERSUDRAFT_129370 [Ceriporiopsis subvermispora
B]
Length = 794
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 130/249 (52%), Gaps = 43/249 (17%)
Query: 162 LVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAET 221
S+ S E ++ + L ++KS+ LGF PTPIQ A IP A GK D++G A T
Sbjct: 197 FASDVAPSEEHSSFLSMNLSRPIIKSLTTLGFNTPTPIQAATIPVALL-GK-DVVGNAVT 254
Query: 222 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 281
GSGKT AF +P+++RL M ++G++A R L++ PTRELA+Q +
Sbjct: 255 GSGKTAAFIIPMLERL---------MYRDRGKKA------AATRCLVLVPTRELAVQCFE 299
Query: 282 HLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 341
++A ++R +VGG+S + QE L+ RP++V+ TPGRL + + +E L
Sbjct: 300 VGTKLAAHTDIRSCLVVGGLSLKAQEASLRTRPDVVIATPGRLIDHLRNSPTFTLE--AL 357
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 401
VLDEADRM+E+G EL II P + RQT++F
Sbjct: 358 DILVLDEADRMLEDGFSDELTEIIKSCPTS------------------------RQTMLF 393
Query: 402 SATIALSAD 410
SAT+ + D
Sbjct: 394 SATMTDTVD 402
>gi|15219185|ref|NP_173078.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
gi|75336890|sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36
gi|4966350|gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila
melanogaster and is a member of PF|00270 DEAD/DEAH box
helicase family [Arabidopsis thaliana]
gi|332191310|gb|AEE29431.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
Length = 491
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 130/250 (52%), Gaps = 50/250 (20%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 250
LG ++PTP+Q C+P G+ D++G A+TGSGKT AF LPI+ RL E+
Sbjct: 76 LGMRKPTPVQTHCVPKIL-AGR-DVLGLAQTGSGKTAAFALPILHRLAED---------- 123
Query: 251 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL 310
P G + AL++TPTRELA Q+ + K + +N+R IVGGM Q L
Sbjct: 124 ---------PYG-VFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSL 173
Query: 311 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
+RP +V+ TPGR+ L+ F VLDEADR+++ G EL++I LP
Sbjct: 174 VSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLP- 232
Query: 371 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK--LKQSVNG 428
K RQTL+FSAT ++++ + L+H S K ++ G
Sbjct: 233 -----------------------KSRQTLLFSAT--MTSNLQALLEHSSNKAYFYEAYEG 267
Query: 429 LNSIETLSER 438
L +++TL+++
Sbjct: 268 LKTVDTLTQQ 277
>gi|380448994|gb|AFD54569.1| vasa [Lepeophtheirus salmonis]
Length = 539
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 134/250 (53%), Gaps = 37/250 (14%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
D + ++ ++ + + ++EL L LL+++I G+K+PTPIQK IP K DI
Sbjct: 100 DSVQVDVKGTGDLPPKINCFSELNLRELLVRNIGLSGYKKPTPIQKTGIPLIL--AKRDI 157
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 275
+ ++TGSGKT AF LPI+Q +L++ E + ++K LI+ PTREL
Sbjct: 158 MACSQTGSGKTAAFLLPIIQFILQKGEFSSASSQQKPS------------CLIVAPTREL 205
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
A+Q+ D ++ +KG ++ V + GG S Q + ++++ TPGRL +L+S G
Sbjct: 206 AIQIKDEARKFSKGSMIKSVVLYGGTSVGYQCSQIVRGVDILIATPGRLLDLVSKGA--- 262
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
V L + FFVLDEADRM++ G E++ I+ SE C T
Sbjct: 263 VSLDAVQFFVLDEADRMLDMGFLPEVKRIV-------------SEGNMCCKT-------S 302
Query: 396 RQTLVFSATI 405
RQTL+FSAT
Sbjct: 303 RQTLMFSATF 312
>gi|327295054|ref|XP_003232222.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
gi|326465394|gb|EGD90847.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
Length = 813
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 143/308 (46%), Gaps = 73/308 (23%)
Query: 105 PGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVS 164
P D DEDG+G + E + ++ Q + EE VT EL S
Sbjct: 252 PDDLASDEDGSGSESEDDDEIRKQN-----------EFFAPEEQVT----------ELKS 290
Query: 165 EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSG 224
+ F L L +++ + +GF PTPIQ+ IP A GK D++G A TGSG
Sbjct: 291 TSRAPASF---QNLSLSRPILRGLASVGFSTPTPIQRKTIPVALL-GK-DVVGGAVTGSG 345
Query: 225 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDH 282
KT AF +PI++RLL Y P+ R I+ PTRELA+Q +
Sbjct: 346 KTGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNV 386
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
++A ++ +VGG S +QE +LK RP++++ TPGR + M V+ TL
Sbjct: 387 ATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLE 444
Query: 343 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 402
VLDEADRM+E+G EL I+ +P K RQT++FS
Sbjct: 445 ILVLDEADRMLEDGFAEELNEILTTIP------------------------KSRQTMLFS 480
Query: 403 ATIALSAD 410
AT+ S D
Sbjct: 481 ATMTSSVD 488
>gi|302833349|ref|XP_002948238.1| hypothetical protein VOLCADRAFT_80160 [Volvox carteri f.
nagariensis]
gi|300266458|gb|EFJ50645.1| hypothetical protein VOLCADRAFT_80160 [Volvox carteri f.
nagariensis]
Length = 836
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 134/255 (52%), Gaps = 54/255 (21%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ +L L L+K++ LG+K PTPIQ ACIP A G+ DI G+A TGSGKT AF LP
Sbjct: 175 SFADLNLSRPLLKAVEALGYKTPTPIQAACIPLAL-AGR-DICGSAVTGSGKTAAFALPF 232
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGIN 291
++RLL + P+G L++TPTRELA+Q+ ++++A+ +
Sbjct: 233 LERLL-------------------HRPRGLAATYVLVLTPTRELAVQIHSMIEKLAQFTD 273
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
V V IVGG+S Q L+ PE+VV TPGRL + + + V L L+ VLDEADR
Sbjct: 274 VTVALIVGGLSLSVQAATLRKLPEVVVATPGRLIDHLRNSQS--VGLEDLAVLVLDEADR 331
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 411
++E G E+ ++ P KKRQT++FSAT S
Sbjct: 332 LLEMGFRDEVMEVVRCAP------------------------KKRQTMLFSAT--FSDQV 365
Query: 412 RKKLKHGSLKLKQSV 426
R + SL LKQ V
Sbjct: 366 RDLV---SLSLKQPV 377
>gi|82751683|ref|YP_417424.1| ATP-dependent RNA helicase [Staphylococcus aureus RF122]
gi|123548216|sp|Q2YUH3.1|Y1965_STAAB RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SAB1965c
gi|82657214|emb|CAI81654.1| ATP-dependent RNA helicase [Staphylococcus aureus RF122]
Length = 506
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVWKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|449667317|ref|XP_002168355.2| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Hydra
magnipapillata]
Length = 429
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 126/243 (51%), Gaps = 48/243 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L LH L K +G +PT IQ +CIP G+ D IG+A+TGSGKT AF LPI+
Sbjct: 5 FTDLGLHEWLNKQCLEMGISKPTEIQVSCIPEIL-SGR-DCIGSAKTGSGKTAAFALPII 62
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q+L E+ P G + ALI+TPTRELA+Q+ D K + K I +
Sbjct: 63 QKLSED-------------------PYG-IFALILTPTRELAIQIADQFKALGKSIGLND 102
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I+GG+ KQ L +P +V+ TPGRL ++ G K L+ + F VLDEADR++E
Sbjct: 103 AVIIGGLDMVKQGMELSNQPHVVIATPGRLASHITSGTKF--SLNKIKFLVLDEADRLLE 160
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 414
+L+ I D + KKRQTL+FSATI + + K+
Sbjct: 161 KSFENDLEVIFDNIA------------------------KKRQTLLFSATITDAINHLKE 196
Query: 415 LKH 417
+ H
Sbjct: 197 VAH 199
>gi|444318547|ref|XP_004179931.1| hypothetical protein TBLA_0C06160 [Tetrapisispora blattae CBS 6284]
gi|387512972|emb|CCH60412.1| hypothetical protein TBLA_0C06160 [Tetrapisispora blattae CBS 6284]
Length = 757
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 127/234 (54%), Gaps = 46/234 (19%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
+ +N L L ++K + LG+ +P+PIQ A IP A GK DII A TGSGKT AF +P
Sbjct: 236 NTFNTLSLSRPVLKGLAALGYSKPSPIQSAAIPIALL-GK-DIIAGAVTGSGKTAAFMIP 293
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN- 291
I++RLL K A R +++TPTRELA+QV+D K+V K +N
Sbjct: 294 IIERLLY-----------------KPAKVTSTRVIVLTPTRELAIQVSDVGKKVGKFVNG 336
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
V VGG++ +QE+ LK+RP++VV TPGR + + V+ ++ V+DEADR
Sbjct: 337 VTFGLAVGGLNLRQQEQQLKSRPDIVVATPGRFIDHIRNSASFNVD--SVEILVIDEADR 394
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M+E+G EL I+ +LP KRQTL+FSAT+
Sbjct: 395 MLEDGFQDELNEIMSLLP------------------------SKRQTLLFSATM 424
>gi|358347102|ref|XP_003637601.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355503536|gb|AES84739.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 781
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 132/240 (55%), Gaps = 24/240 (10%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
++I +W E +L L+K++ + G+K P+PIQ A IP Q D+IG AETGSGK
Sbjct: 279 SKIPRPMRSWVESKLSQELLKAVEKAGYKTPSPIQMAAIPLGLQQR--DVIGVAETGSGK 336
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 337 TAAFVLPMLSYITR--------LPPISEENEAEGPY----AVVMAPTRELAQQIEDETVK 384
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
A+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ V
Sbjct: 385 FAQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCL---ERRYAVLNQCNYVV 441
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
LDEADRMI+ G ++ ++D +P +N E + E+ +R R T +FSAT+
Sbjct: 442 LDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDE-------KRIYRTTYMFSATM 494
>gi|24374899|ref|NP_718942.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
gi|24349603|gb|AAN56386.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
Length = 409
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 129/232 (55%), Gaps = 43/232 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L L+ L+ ++ LG+++PTPIQ IPA K D++ A+TG+GKT AF LPI
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILT--KQDVMAGAQTGTGKTAAFALPI 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q L M + + + A K +RAL++ PTRELALQV + AKG ++R
Sbjct: 60 LQLL---------MADNQSDHAAK-----AIRALVLVPTRELALQVQQSFVKYAKGTDIR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V GG+S E Q+ + A ++++ TPGRL + + G +L +L+TL F DEADRM+
Sbjct: 106 VGIAYGGVSIEAQQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVF---DEADRML 162
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G E+Q+++ +P +RQTL+FSAT+
Sbjct: 163 DMGFMDEIQAVLKQVP------------------------AQRQTLLFSATL 190
>gi|423216420|ref|ZP_17202944.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
gi|392690791|gb|EIY84045.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
Length = 374
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++K+I G+ PTPIQ+ IP A K DI+G A+TG+GKT +F +PI+
Sbjct: 3 FKELNITEPILKAIGEKGYTVPTPIQEKAIPPAL--AKRDILGCAQTGTGKTASFAIPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L ++E A +G ++ALI+TPTRELALQ+++ + + +K +R
Sbjct: 61 QHLQLDKEAA----RRQG-----------IKALILTPTRELALQISECIDDYSKHTRIRH 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG++ Q LL+ +++V TPGRL +LMS G H L T+ +FVLDEADRM++
Sbjct: 106 GVIFGGVNQRPQVDLLRKGIDILVATPGRLLDLMSQGHIH---LDTIQYFVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+ LP K++QTL FSAT+
Sbjct: 163 MGFIHDIKRILPKLP------------------------KEKQTLFFSATM 189
>gi|295085349|emb|CBK66872.1| Superfamily II DNA and RNA helicases [Bacteroides xylanisolvens
XB1A]
Length = 374
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++K+I G+ PTPIQ+ IP A K DI+G A+TG+GKT +F +PI+
Sbjct: 3 FKELNITEPILKAIGEKGYTVPTPIQEKAIPPAL--AKRDILGCAQTGTGKTASFAIPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L ++E A +G ++ALI+TPTRELALQ+++ + + +K +R
Sbjct: 61 QHLQLDKEAA----RRQG-----------IKALILTPTRELALQISECIDDYSKHTRIRH 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG++ Q LL+ +++V TPGRL +LMS G H L T+ +FVLDEADRM++
Sbjct: 106 GVIFGGVNQRPQVDLLRKGIDILVATPGRLLDLMSQGHIH---LDTIQYFVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+ LP K++QTL FSAT+
Sbjct: 163 MGFIHDIKRILPKLP------------------------KEKQTLFFSATM 189
>gi|262409233|ref|ZP_06085777.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645798|ref|ZP_06723482.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CC 2a]
gi|294809471|ref|ZP_06768175.1| ATP-dependent RNA helicase RhlE [Bacteroides xylanisolvens SD CC
1b]
gi|262352980|gb|EEZ02076.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638877|gb|EFF57211.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CC 2a]
gi|294443343|gb|EFG12106.1| ATP-dependent RNA helicase RhlE [Bacteroides xylanisolvens SD CC
1b]
Length = 374
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++K+I G+ PTPIQ+ IP A K DI+G A+TG+GKT +F +PI+
Sbjct: 3 FKELNITEPILKAIGEKGYTVPTPIQEKAIPPAL--AKRDILGCAQTGTGKTASFAIPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L ++E A +G ++ALI+TPTRELALQ+++ + + +K +R
Sbjct: 61 QHLQLDKEAA----RRQG-----------IKALILTPTRELALQISECIDDYSKHTRIRH 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG++ Q LL+ +++V TPGRL +LMS G H L T+ +FVLDEADRM++
Sbjct: 106 GVIFGGVNQRPQVDLLRKGIDILVATPGRLLDLMSQGHIH---LDTIQYFVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+ LP K++QTL FSAT+
Sbjct: 163 MGFIHDIKRILPKLP------------------------KEKQTLFFSATM 189
>gi|205372271|ref|ZP_03225085.1| hypothetical protein Bcoam_02010 [Bacillus coahuilensis m4-4]
Length = 499
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 130/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L P ++KSI R+GF+E TPIQ IP + +GK DIIG A+TG+GKT AFG+P++
Sbjct: 4 FSELNLSPSMLKSINRMGFEEATPIQAGTIPLSL-EGK-DIIGQAQTGTGKTAAFGIPLV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ + +++ LII PTRELA+QV++ L +V VRV
Sbjct: 62 EKIDTK--------------------NTNVQGLIIAPTRELAIQVSEELYKVGYDKRVRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GG +Q R +K P ++VGTPGRL + ++ L ++HTL VLDEAD M+
Sbjct: 102 LAVYGGQDINRQIRAMKKGPHIIVGTPGRLLDHINRRTLKLDQVHTL---VLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++SI+ +P EG RQTL+FSAT+
Sbjct: 159 MGFIDDIESILKNVP------EG------------------RQTLLFSATM 185
>gi|443922203|gb|ELU41680.1| ATP-dependent RNA helicase drs1 [Rhizoctonia solani AG-1 IA]
Length = 1126
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 145/287 (50%), Gaps = 58/287 (20%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
++A++ T F + N R PLL +++ GF PTPIQ A IP A GK D++G A TGS
Sbjct: 180 TDAQVHTSFTSMNLSR--PLL-RALTSAGFNSPTPIQAATIPVAL-LGK-DVVGGAVTGS 234
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 283
GKT AF +PI++RLL A H R L++ PTRELA+Q
Sbjct: 235 GKTAAFIIPILERLLYRSRDA------------------HTRVLVLVPTRELAVQCHAVA 276
Query: 284 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 343
+++ +VR IVGG+S + QE L+ RP+LVV TPGRL + + L L
Sbjct: 277 EKLGTFTDVRCALIVGGLSLKAQEATLRTRPDLVVATPGRLIDHLRNSRS--FALDALDV 334
Query: 344 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 403
VLDEADRM+ +G EL+ I+ Q+C T RQT++FSA
Sbjct: 335 LVLDEADRMLSDGFADELKEIV-----------------QSCPT-------GRQTMLFSA 370
Query: 404 TIALSAD--FRKKLKHGSLKL-----KQSVNGLNSIETLSERAGMRA 443
T+ + R L+H ++L KQ+ GL E + RAG A
Sbjct: 371 TMTDDVETLIRLSLRH-PVRLFVDPSKQTARGLVQ-EFVRVRAGKEA 415
>gi|336311025|ref|ZP_08565993.1| ATP-dependent RNA helicase [Shewanella sp. HN-41]
gi|335865440|gb|EGM70463.1| ATP-dependent RNA helicase [Shewanella sp. HN-41]
Length = 409
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 128/232 (55%), Gaps = 43/232 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++N L LH L+ ++ LG+++PTPIQ IP K D++ A+TG+GKT AF LPI
Sbjct: 2 SFNSLSLHSQLVNTLAELGYQQPTPIQVEAIPVIL--AKQDLMAGAQTGTGKTAAFALPI 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ L+ A + EE AP+ H+RAL++ PTRELA+QV AKG ++R
Sbjct: 60 LHGLM-----AAPLTEE--------APR-HIRALVLVPTRELAVQVQQSFVNYAKGTDIR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG+S + Q + KA ++++ TPGRL + + G +L +L+ L F DEADRM+
Sbjct: 106 IGIAYGGVSIDAQVEVFKAGIDVLIATPGRLLDHLRQGALNLKQLNVLVF---DEADRML 162
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G E+++++ +P KRQTL+FSAT+
Sbjct: 163 DMGFMDEIKAVLKQVP------------------------AKRQTLLFSATL 190
>gi|162447374|ref|YP_001620506.1| ATP-dependent RNA helicase, DEAD box containing [Acholeplasma
laidlawii PG-8A]
gi|161985481|gb|ABX81130.1| ATP-dependent RNA helicase, superfamily II [Acholeplasma laidlawii
PG-8A]
Length = 448
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 135/231 (58%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL + + K++ G++ PT IQ+ IP G+ D++G+A+TG+GKT AF +PI+
Sbjct: 3 FSELNIIERIQKALTLSGYEAPTAIQEQAIPILL-SGQ-DLLGSAQTGTGKTAAFAIPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q++ E +E AP+ ++ALI+TPTRELALQ+ +++K AK +N+
Sbjct: 61 QKIYETKEHK--------------APR-KVQALILTPTRELALQIHENVKIYAKYLNIIS 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S ++QE LK ++V+ TPGRL +LM+ + ++ L + + VLDEAD+M++
Sbjct: 106 TTIYGGVSQKRQEEALKRGVDVVIATPGRLLDLMN---QKIISLQDVRYLVLDEADQMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ SI+D P KKRQT++FSAT+
Sbjct: 163 MGFIKDVTSIVDKTP------------------------KKRQTMLFSATM 189
>gi|374290252|ref|YP_005037305.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Blattabacterium
sp. (Cryptocercus punctulatus) str. Cpu]
gi|358377044|gb|AEU09232.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Blattabacterium
sp. (Cryptocercus punctulatus) str. Cpu]
Length = 550
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 124/225 (55%), Gaps = 51/225 (22%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL-LEERE 242
++K+I +GFK PTPIQK IP K DII A+TG+GKT AFGLPI+Q++ LE R
Sbjct: 14 IIKAIENIGFKYPTPIQKKVIPFLLESEK-DIIALAQTGTGKTAAFGLPIIQKINLEIR- 71
Query: 243 KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-VRVVPIVGGM 301
YA +ALI+ PTREL LQ+T L +K I ++++P+ GG+
Sbjct: 72 ---------------YA-----QALILCPTRELCLQITRDLLSFSKYILLIKIIPLYGGV 111
Query: 302 STEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 361
S + Q +LLK ++VGTPGR+ +L+ + + L + + +LDEAD M+ G EL
Sbjct: 112 SIDNQIQLLKKSNHIIVGTPGRIIDLIRRNKLY---LSNIKYLILDEADEMLNMGFKEEL 168
Query: 362 QSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
SII LP KKRQ+L+FSAT++
Sbjct: 169 DSIILKLP------------------------KKRQSLLFSATMS 189
>gi|113969505|ref|YP_733298.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-4]
gi|113884189|gb|ABI38241.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-4]
Length = 409
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 129/232 (55%), Gaps = 43/232 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L LH L+ ++ LG+++PTPIQ IPA K D++ A+TG+GKT AF LP+
Sbjct: 2 SFSALSLHSQLVNTLAELGYQQPTPIQIEAIPAIL--AKQDVMAGAQTGTGKTAAFALPV 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q+LL L+ + ++A K +RAL++ PTRELA+QV + AKG ++R
Sbjct: 60 LQQLL---------LDNQSQDAPK-----DIRALVLVPTRELAVQVQQSFGKYAKGTDIR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG+S E Q+ KA ++++ TPGRL + + G + L LS V DEADRM+
Sbjct: 106 IGIAYGGVSIEAQQAEFKAGIDVLIATPGRLLDHLRQGA---LNLKHLSVLVFDEADRML 162
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G E+++++ +P +RQTL+FSAT+
Sbjct: 163 DMGFMDEIKAVLKQVP------------------------AQRQTLLFSATL 190
>gi|359475106|ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 712
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 132/242 (54%), Gaps = 28/242 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
++I +W E +L L+K++ R G+K P+PIQ A IP Q D+IG AETGSGK
Sbjct: 285 SKIPRPMRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQR--DVIGIAETGSGK 342
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 343 TAAFVLPMLTYI--------SRLPPMSEENEAEGPY----AVVMAPTRELAQQIEDETVK 390
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
A + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ V
Sbjct: 391 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVV 447
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSA 403
LDEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSA
Sbjct: 448 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSA 498
Query: 404 TI 405
T+
Sbjct: 499 TM 500
>gi|409046062|gb|EKM55542.1| hypothetical protein PHACADRAFT_173680 [Phanerochaete carnosa
HHB-10118-sp]
Length = 668
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 126/239 (52%), Gaps = 17/239 (7%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+I +W E + LL+ I R+G+KEP+PIQ+ IP DIIG AETGSGKT
Sbjct: 235 QIPHPLRSWTESDIPQLLLDVIERIGYKEPSPIQRQAIPIGLQNR--DIIGIAETGSGKT 292
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
AF +P++ + L +E P +LI+ PTRELA Q+ K+
Sbjct: 293 AAFVIPMLSFI--------SKLPLFTDENRHLGPY----SLILAPTRELAQQIESETKKF 340
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
A + V IVGG + E+Q+ L+A E+++ TPGRL +++ E+H++ L + V+
Sbjct: 341 AGSLGFTCVSIVGGRAVEEQQFNLRAGAEIIIATPGRLKDVI---ERHVIVLSQCRYIVM 397
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
DEADRM+ G +L I+D LP E Q EQ + + R T +FSAT+
Sbjct: 398 DEADRMVNLGFEADLTFILDKLPSDTMEGEDQGEQMDIDGETMIKKGRTRVTTLFSATM 456
>gi|70725957|ref|YP_252871.1| hypothetical protein SH0956 [Staphylococcus haemolyticus JCSC1435]
gi|123660708|sp|Q4L7W0.1|Y956_STAHJ RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SH0956
gi|68446681|dbj|BAE04265.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 503
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 131/226 (57%), Gaps = 36/226 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP +GK DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVETLEAMGFKEPTPIQKDSIPYTL-EGK-DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK + ++ALI+ PTRELA+QV + L+E ++G NV+V
Sbjct: 62 ---------------------EKVVGQSGVQALILAPTRELAMQVAEQLREFSRGQNVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM ++Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
G +++ I+D +P +EQ QT + S+ K QTLV
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQRQTML-FSATMPKAIQTLV 193
>gi|358056510|dbj|GAA97479.1| hypothetical protein E5Q_04157 [Mixia osmundae IAM 14324]
Length = 476
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 120/232 (51%), Gaps = 47/232 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L L P L +++ + ++PT +Q ACIP QG+ D IG+A+TGSGKT+AF PI
Sbjct: 2 SFDSLGLEPFLCRALDSMSIRKPTEVQAACIPPIL-QGR-DCIGSAQTGSGKTIAFATPI 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q L E+ P G + AL++TPTRELA Q+ D + IN++
Sbjct: 60 LQALAED-------------------PYG-IFALVLTPTRELAFQIADQFVALGTPINLQ 99
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+VGG+ Q L++RP +V+ TPGRL +LM + L F VLDEADRM+
Sbjct: 100 STVVVGGLDMMAQATALRSRPHVVIATPGRLVDLMRSNQNEF-SFARLRFLVLDEADRML 158
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EL I+ LP K+RQTL+F+AT+
Sbjct: 159 NPTFADELGYILAALP------------------------KERQTLLFTATV 186
>gi|108761880|ref|YP_632259.1| ATP-dependent RNA helicase RhlE [Myxococcus xanthus DK 1622]
gi|108465760|gb|ABF90945.1| putative ATP-dependent RNA helicase RhlE [Myxococcus xanthus DK
1622]
Length = 501
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 123/231 (53%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++L+LH L++++ G+ PTPIQ+ IP A G+ D++G A+TG+GKT AF LPI+
Sbjct: 3 FDDLQLHDTLLRAVKAEGYTTPTPIQQKAIPHAL-AGR-DVLGVAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRL + G +R L++TPTRELA QV D KG+ +R
Sbjct: 61 QRLSAKAPAGGAR---------------PVRCLVLTPTRELAGQVGDSFGTYGKGLPLRH 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ Q + L+ +++V TPGRL +LM E+ V L +L FVLDEADRM++
Sbjct: 106 AVIFGGVGQNPQVQTLRNGVDVLVATPGRLLDLM---EQGFVSLRSLEVFVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ +I LP KRQTL FSAT+
Sbjct: 163 MGFIHDVRRVIKALP------------------------PKRQTLFFSATL 189
>gi|381204134|ref|ZP_09911205.1| ATP-dependent RNA helicase [SAR324 cluster bacterium JCVI-SC
AAA005]
Length = 556
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 44/236 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E+ L +++++ GF EPTPIQ+ IP D+IG A+TG+GKT AFG+P++
Sbjct: 3 FQEMGLSDAVLRALVESGFSEPTPIQEQVIPLQIRHN--DVIGQAQTGTGKTAAFGIPLI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+RL +++ K + ALI+TPTRELA QVTD L+ + ++ +
Sbjct: 61 ERL---------------SPRQRHDSKHTMDALILTPTRELASQVTDELRRIGLYKSLSI 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V I GG+S E+Q R L+ ++VGTPGR+ + +S G ++L + FVLDEAD M++
Sbjct: 106 VTIYGGVSIEQQIRTLRRGTNIIVGTPGRVLDHLSRGT---IDLSGVRHFVLDEADEMVD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
G ++Q+I+ LP +KRQ L+FSAT++ D
Sbjct: 163 MGFIEDIQTIMQSLP------------------------EKRQILLFSATMSPEID 194
>gi|302695203|ref|XP_003037280.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
gi|300110977|gb|EFJ02378.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
Length = 771
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 133/262 (50%), Gaps = 54/262 (20%)
Query: 160 EE-----------LVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAA 208
EE SE+ E ++ + L ++K++ LGF +PTPIQ A IP A
Sbjct: 155 EETQAEKDRKAAYFDSESGAPAEHSSFLTMNLSRPILKALTTLGFTKPTPIQAATIPVAL 214
Query: 209 HQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALI 268
GK D++G A TGSGKT AF +P+++RLL EKG++A R L+
Sbjct: 215 -LGK-DVVGNAVTGSGKTAAFTIPMLERLL---------YREKGKKA------AATRCLV 257
Query: 269 ITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELM 328
+ PTRELA+Q + K++A ++ V IVGG+S + QE L+ARP++V+ TPGRL + +
Sbjct: 258 LVPTRELAVQCYEVGKKLAAHTDIEVALIVGGLSLKSQEATLRARPDIVIATPGRLIDHI 317
Query: 329 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTV 388
L L VLDEADRM+ +G EL II P
Sbjct: 318 HNSPSF--TLDNLDVLVLDEADRMLSDGFADELTEIIKACP------------------- 356
Query: 389 SSLQRKKRQTLVFSATIALSAD 410
K RQT++FSAT+ S D
Sbjct: 357 -----KSRQTMLFSATMTDSVD 373
>gi|403746506|ref|ZP_10955039.1| DEAD/DEAH box helicase domain-containing protein [Alicyclobacillus
hesperidum URH17-3-68]
gi|403120837|gb|EJY55191.1| DEAD/DEAH box helicase domain-containing protein [Alicyclobacillus
hesperidum URH17-3-68]
Length = 524
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 130/248 (52%), Gaps = 55/248 (22%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E LH ++++I+ +GF+ P+PIQ ACIP VD+IG A+TG+GKT AFG+P++
Sbjct: 2 FEEFGLHRRVLQAIHDMGFEAPSPIQAACIPIVME--GVDVIGQAQTGTGKTAAFGIPLV 59
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E P H++A+++TPTRELA+QV ++++AK VR
Sbjct: 60 ---------------------EMMTPDPHVQAIVLTPTRELAIQVAGEIRKIAKYKRVRS 98
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
VPI GG S Q R LK +V+GTPGR+ + + G ++L + VLDEAD M++
Sbjct: 99 VPIYGGQSIGHQIRALKQGVHIVIGTPGRVLDHIRRGT---LQLGQVRMVVLDEADEMLD 155
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++++I+ P ++RQTL+FSAT LS
Sbjct: 156 MGFIDDIEAILRETP------------------------EERQTLLFSATFPSEVKRLSG 191
Query: 410 DFRKKLKH 417
+ + +H
Sbjct: 192 RYMRDPRH 199
>gi|358467620|ref|ZP_09177312.1| hypothetical protein HMPREF9093_01792 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357067539|gb|EHI77649.1| hypothetical protein HMPREF9093_01792 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 529
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 27/198 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK E E H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------EKFETTEH-----HIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 108
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +FVLDEAD M+
Sbjct: 109 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFVLDEADEMLN 165
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 166 MGFVEDIEKI---LTFTN 180
>gi|325568403|ref|ZP_08144770.1| cold-shock DEAD box protein A [Enterococcus casseliflavus ATCC
12755]
gi|420263005|ref|ZP_14765645.1| cold-shock DEAD box protein A [Enterococcus sp. C1]
gi|325158172|gb|EGC70325.1| cold-shock DEAD box protein A [Enterococcus casseliflavus ATCC
12755]
gi|394769969|gb|EJF49787.1| cold-shock DEAD box protein A [Enterococcus sp. C1]
Length = 508
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 133/261 (50%), Gaps = 56/261 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L L+ S+ R GF+E TPIQ+A IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKDLELSNELLTSVERAGFEEATPIQEATIPLAL-AGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
EK P H L+ L+I PTRELA+Q + L + K +R
Sbjct: 61 ---------------------EKIDPANHQLQGLVIAPTRELAIQTQEELYRLGKDKKIR 99
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V + GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 100 VQAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVETLVLDEADEML 156
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LS 408
G +++ II +P RQTL+FSAT+ +
Sbjct: 157 NMGFLEDIEKIISQVPDV------------------------RQTLLFSATMPPAIKNIG 192
Query: 409 ADFRKKLKHGSLKLKQSVNGL 429
F K+ +H +K K+ L
Sbjct: 193 VKFMKEPEHVQIKAKEMTADL 213
>gi|262066543|ref|ZP_06026155.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium
periodonticum ATCC 33693]
gi|291379777|gb|EFE87295.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium
periodonticum ATCC 33693]
Length = 528
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKILKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFEHSDHIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +FVLDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFVLDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFVEDIEKI---LTFTN 179
>gi|332374708|gb|AEE62495.1| unknown [Dendroctonus ponderosae]
Length = 470
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 121/224 (54%), Gaps = 24/224 (10%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
++ E +++L+L ++K + +G K PTPIQ CIP +GK IGAA+TGSGKTL
Sbjct: 1 MAEELSNFSQLKLQNWIVKQCHSIGVKRPTPIQANCIPKIL-EGKT-CIGAAKTGSGKTL 58
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF LPI+Q+L E+ P G + AL++TP RELA Q+ D +
Sbjct: 59 AFALPIVQKLYED-------------------PYG-IYALVLTPIRELAFQIADQFAILG 98
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K +N+R +VGGM +Q R L P +VV TPGRL + + G + L + F V+D
Sbjct: 99 KPMNMRTCVVVGGMDMVEQGRQLSKVPHVVVATPGRLVDHLEGCDTF--TLSRIKFLVID 156
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 391
EADR++ +++ I +LP T S + T T T+ L
Sbjct: 157 EADRLLGGLFDDQIKRIFSVLPKTRQSIYFSATMTDTLQTLKKL 200
>gi|300120104|emb|CBK19658.2| unnamed protein product [Blastocystis hominis]
Length = 620
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 140/242 (57%), Gaps = 28/242 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E +HP ++++I LGFKEPTPIQ+ IP +D+IG A+TGSGKT AF +P++
Sbjct: 181 WSEAAVHPAILRAIETLGFKEPTPIQRQAIPIELK--GMDMIGIAKTGSGKTCAFVVPML 238
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI---- 290
Q +++ +E + + E +G L A+++ PTRELA Q+ D +++A+
Sbjct: 239 QYVIQ------APIETRLQSKE----QGPL-AVVMAPTRELAKQIRDDAEKLAQFCVDER 287
Query: 291 -------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 343
+R+ +VGG S +Q L ++++GTPGRL + + E+H V L+ ++
Sbjct: 288 LAQSRSPRIRIACMVGGESIVEQSSFLSNGCDILIGTPGRLLDCL---ERHFVVLNQTNY 344
Query: 344 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 403
VLDEADRMI+ G + +++D + T S E + + + V+SL R T++FSA
Sbjct: 345 IVLDEADRMIDEGFEESVNAVMDAMGSTLKSEE-EEDIEKAAEGVASLTNMYRTTIMFSA 403
Query: 404 TI 405
T+
Sbjct: 404 TM 405
>gi|403415272|emb|CCM01972.1| predicted protein [Fibroporia radiculosa]
Length = 782
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 126/240 (52%), Gaps = 43/240 (17%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E ++ + L ++KSI LGF +PTPIQ A IP A GK DI+G A TGSGKT AF
Sbjct: 191 EHTSFLSMNLSRPIIKSITALGFNKPTPIQAATIPVAL-LGK-DIVGNAVTGSGKTAAFI 248
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
+P+++RLL ++G++A R L++ PTREL +Q + ++A
Sbjct: 249 IPMLERLL---------YRDRGKKA------AATRCLVLVPTRELGVQCFEVGTKLAAHT 293
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
++R +VGG+S + QE L+ RP++V+ TPGRL + + L L VLDEAD
Sbjct: 294 DIRFSLVVGGLSVKTQEATLRTRPDVVIATPGRLIDHLRNSPAFT--LDALDILVLDEAD 351
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
RM+ +G EL II PM+ RQT++FSAT+ S D
Sbjct: 352 RMLSDGFADELTEIIKSCPMS------------------------RQTMLFSATMTDSVD 387
>gi|402221947|gb|EJU02015.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 809
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 126/246 (51%), Gaps = 43/246 (17%)
Query: 165 EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSG 224
+A ST + + L L+K++ LGF++PTPIQ A IP A GK D++G A TGSG
Sbjct: 211 DAATSTSDVTFQSMNLSRPLLKALANLGFEKPTPIQAAAIPVALL-GK-DVVGGAVTGSG 268
Query: 225 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 284
KT AF +PI++RLL ++G+ A R +I+ PTRELA+Q
Sbjct: 269 KTAAFVIPILERLL---------FRDRGKAA------ATTRVVILCPTRELAVQCHAVAT 313
Query: 285 EVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
+ +VR +VGG+S + QE L+ RP++V+ TPGRL + + L L
Sbjct: 314 RIGSFTDVRFSLVVGGLSLKGQEAELRTRPDVVIATPGRLIDHLRNSPSF--SLDMLDVL 371
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
++DEADRM+E G EL II P K+RQT++FSAT
Sbjct: 372 IMDEADRMLEEGFAAELGEIISACP------------------------KQRQTMLFSAT 407
Query: 405 IALSAD 410
+ S D
Sbjct: 408 MTDSVD 413
>gi|415909527|ref|ZP_11553150.1| ATP-dependent RNA helicase [Herbaspirillum frisingense GSF30]
gi|407762572|gb|EKF71396.1| ATP-dependent RNA helicase [Herbaspirillum frisingense GSF30]
Length = 493
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 129/244 (52%), Gaps = 48/244 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P ++K++ G+ PTPIQ IP QG+ D++GAA+TG+GKT F LPI+
Sbjct: 18 FEDFGLSPDILKALAEQGYVHPTPIQAQAIPVVL-QGR-DVMGAAQTGTGKTAGFSLPII 75
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
QRLL+ + +P H +RALI+TPTRELA QV D++ + +R
Sbjct: 76 QRLLQHASHSA-------------SPARHPVRALILTPTRELADQVADNVAAYCRFTPLR 122
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG+ Q +L+A E+V+ TPGRL + + ++ V L V+DEADRM+
Sbjct: 123 STVVFGGVDMSPQTAILRAGVEIVIATPGRLLDHV---QQKTVNLSQTQILVMDEADRML 179
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LS 408
+ G +LQ II++LP K+RQ L+FSAT + L+
Sbjct: 180 DMGFLPDLQRIINLLP------------------------KQRQNLLFSATFSPEIKKLA 215
Query: 409 ADFR 412
A F+
Sbjct: 216 ASFQ 219
>gi|322706999|gb|EFY98578.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Metarhizium
anisopliae ARSEF 23]
Length = 714
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E L L+ + R+G+KEPTPIQ+A IP A D+IG A TGSGKT AF LP+
Sbjct: 273 SWEESGLPQRLLDIVDRVGYKEPTPIQRAAIPIALQAR--DLIGVAVTGSGKTAAFLLPL 330
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + + L E + P ALI+ PTREL Q+ K+ A+ + R
Sbjct: 331 LVYISD--------LPPLTEVNKNDGPY----ALILAPTRELVQQIETEAKKFAEPLGFR 378
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI
Sbjct: 379 CVSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCI---ERRLLVLSQCCYIIMDEADRMI 435
Query: 354 ENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G + I+D LP++N + +E Q + + K RQT++++AT+
Sbjct: 436 DLGFEESVNKILDALPVSNEKPDTDDAENAQLMKSYLGSRDKYRQTMMYTATM 488
>gi|366986679|ref|XP_003673106.1| hypothetical protein NCAS_0A01550 [Naumovozyma castellii CBS 4309]
gi|342298969|emb|CCC66713.1| hypothetical protein NCAS_0A01550 [Naumovozyma castellii CBS 4309]
Length = 748
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 126/235 (53%), Gaps = 46/235 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+ +N L L ++K + LG+ +P+PIQ A IP A GK DII A TGSGKT AF +
Sbjct: 225 YANFNSLSLSRPVLKGLATLGYTKPSPIQSATIPVAL-SGK-DIIAGAVTGSGKTAAFMI 282
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P+++RLL K A R +++TPTRELA+Q++D K++ K IN
Sbjct: 283 PVIERLLF-----------------KSAKIAATRVIVLTPTRELAIQISDVGKKIGKFIN 325
Query: 292 -VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+ VGG++ +QE+ LKARP++V+ TPGR + + V+ ++ V+DEAD
Sbjct: 326 GITFGLAVGGLNLRQQEQELKARPDIVIATPGRFIDHIRNSASFNVD--SVEILVIDEAD 383
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
RM+E G EL I+ +LP KRQTL+FSAT+
Sbjct: 384 RMLEEGFQEELNEIMQLLP------------------------NKRQTLLFSATM 414
>gi|257867061|ref|ZP_05646714.1| helicase [Enterococcus casseliflavus EC30]
gi|257873396|ref|ZP_05653049.1| helicase [Enterococcus casseliflavus EC10]
gi|257877139|ref|ZP_05656792.1| helicase [Enterococcus casseliflavus EC20]
gi|257801117|gb|EEV30047.1| helicase [Enterococcus casseliflavus EC30]
gi|257807560|gb|EEV36382.1| helicase [Enterococcus casseliflavus EC10]
gi|257811305|gb|EEV40125.1| helicase [Enterococcus casseliflavus EC20]
Length = 507
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 133/261 (50%), Gaps = 56/261 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L L+ S+ R GF+E TPIQ+A IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKDLELSNELLTSVERAGFEEATPIQEATIPLAL-AGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
EK P H L+ L+I PTRELA+Q + L + K +R
Sbjct: 61 ---------------------EKIDPTNHQLQGLVIAPTRELAIQTQEELYRLGKDKKIR 99
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V + GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 100 VQAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVETLVLDEADEML 156
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LS 408
G +++ II +P RQTL+FSAT+ +
Sbjct: 157 NMGFLEDIEKIISQVP------------------------DVRQTLLFSATMPPAIKNIG 192
Query: 409 ADFRKKLKHGSLKLKQSVNGL 429
F K+ +H +K K+ L
Sbjct: 193 VKFMKEPEHVQIKAKEMTADL 213
>gi|373455480|ref|ZP_09547312.1| hypothetical protein HMPREF9453_01481 [Dialister succinatiphilus
YIT 11850]
gi|371934839|gb|EHO62616.1| hypothetical protein HMPREF9453_01481 [Dialister succinatiphilus
YIT 11850]
Length = 504
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 130/234 (55%), Gaps = 49/234 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+D + EL + P ++K++ +GF+EP+PIQKA IP A GK D+IG A+TG+GKT AFG+
Sbjct: 2 YDTFKELGIAPEILKAVEDMGFEEPSPIQKAAIPIAL-TGK-DLIGQAQTGTGKTAAFGI 59
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
PI++R+ + K P+ A++++PTRELA+Q + + +A+ +
Sbjct: 60 PILERI----------------DTSKPGPQ----AVVLSPTRELAIQSAEEINHLAQYLP 99
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ +PI GG E+Q + L+ P ++V TPGRL + M G ++L + VLDE D
Sbjct: 100 IHALPIYGGQDIERQFKALRKHPNIIVATPGRLMDHMKRGT---IDLSHVQVLVLDEGDE 156
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G ++++I+ +P ++RQT+ FSAT+
Sbjct: 157 MVDMGFIDDIRTILAGIP------------------------EERQTMFFSATM 186
>gi|409195488|ref|ZP_11224151.1| DEAD/DEAH box helicase-like protein [Marinilabilia salmonicolor JCM
21150]
Length = 427
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 126/232 (54%), Gaps = 38/232 (16%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L +++S+ G+ +PTPIQ+ IP G D++G A+TG+GKT AF +PI+
Sbjct: 3 FKDLELIEPILRSLKEKGYTQPTPIQEQSIPILL--GGKDLLGCAQTGTGKTAAFSIPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q + L + + K L+ALI+TPTRELA+Q+ + L + K +R
Sbjct: 61 QNI---------YLNSSADNQSRRRRKPRLKALIVTPTRELAIQIGESLTDYGKYTGIRN 111
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG+ Q + L+ +++V TPGRL +L+S G + L + +FVLDEADRM++
Sbjct: 112 IVIFGGVKQGAQTQSLQRGTDILVATPGRLLDLISQG---FISLREIEYFVLDEADRMLD 168
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
G +++ II++LP KRQ+L FSAT+A
Sbjct: 169 MGFIHDVRKIINLLP------------------------AKRQSLFFSATMA 196
>gi|392970003|ref|ZP_10335412.1| probable DEAD-box ATP-dependent RNA helicase [Staphylococcus
equorum subsp. equorum Mu2]
gi|403046049|ref|ZP_10901524.1| ATP-dependent RNA helicase [Staphylococcus sp. OJ82]
gi|392511931|emb|CCI58617.1| probable DEAD-box ATP-dependent RNA helicase [Staphylococcus
equorum subsp. equorum Mu2]
gi|402764211|gb|EJX18298.1| ATP-dependent RNA helicase [Staphylococcus sp. OJ82]
Length = 507
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 131/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L + +++ +GF + TPIQK IP A +GK D++G A+TG+GKT AFG+P++
Sbjct: 4 FKELGLSDKMAETLASMGFDDATPIQKESIPLAL-EGK-DVLGQAQTGTGKTGAFGIPLV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK A K +++LI+ PTRELA+QV + ++E AKG NV+V
Sbjct: 62 ---------------------EKVADKEGVQSLILAPTRELAMQVAESIREFAKGQNVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM ++Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIDRQIKSLKKGPQIVVGTPGRVIDHLNRRTLKTNDVHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P + +RQT++FSAT+
Sbjct: 158 MGFIDDMKFIMDKIPAS-----------------------QRQTMLFSATM 185
>gi|417795517|ref|ZP_12442737.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21305]
gi|334270877|gb|EGL89273.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21305]
Length = 506
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 133/247 (53%), Gaps = 54/247 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E + G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSCGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQ 194
Query: 410 DFRKKLK 416
F K K
Sbjct: 195 QFMKSPK 201
>gi|149641853|ref|XP_001511203.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Ornithorhynchus
anatinus]
Length = 812
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 113/207 (54%), Gaps = 30/207 (14%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L L++TPTRELA+QV H+ VA+ ++ +VGGM+ +KQ+R+L RPE+V+ TPGR
Sbjct: 355 LLGLVLTPTRELAVQVKHHIDAVARFTGIKTALLVGGMAAQKQQRVLNRRPEIVIATPGR 414
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
LWEL+ HL L L V+DEADRM+E GHF EL +++ML N+ Q
Sbjct: 415 LWELIKEKHPHLSNLRRLRCLVIDEADRMVERGHFAELSQLLEML------NDSQYN--- 465
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSAD-----FRKKLKHGSLKLKQSVNGLNSIETLSER 438
+RQT VFSAT+ L + F+KK KH ++ ++ L ++
Sbjct: 466 ----------PRRQTFVFSATLTLVHEVPARVFQKK-KHA-----HKLDTKTKLDQLVQK 509
Query: 439 AGMRANVAIVDLTNVSVLANKLEESFI 465
GMR ++DLT L E+ I
Sbjct: 510 IGMRGKPKVIDLTRKEATVEALTETRI 536
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 162 LVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAET 221
L A+ T+ AW +L + +++++ LGF+ PTPIQ + A + +DI+GAAET
Sbjct: 190 LSGSADGETDMSAWKDLFVPKPVLRALSSLGFEAPTPIQALTLTPAI-RDNLDILGAAET 248
Query: 222 GSGKTLAFGLPIMQRLLEER 241
GSGKTLAF +P++ +L R
Sbjct: 249 GSGKTLAFAIPMIHSVLRWR 268
>gi|429463016|ref|YP_007184479.1| DEAD/DEAH box helicase family protein [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811795|ref|YP_007448250.1| ATP-dependent RNA helicase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|429338530|gb|AFZ82953.1| DEAD/DEAH box helicase family protein [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776953|gb|AGF47952.1| ATP-dependent RNA helicase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 467
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 126/233 (54%), Gaps = 47/233 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ L L+ ++ +I GF+ PTP+Q+A IP A K D++ +A+TGSGKT AF LPI
Sbjct: 2 SFENLGLNANILNAIKATGFESPTPVQQATIPKAIL--KQDLVVSAQTGSGKTAAFMLPI 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-V 292
+Q L +EK A ++ L++TPTRELA+Q+T ++ +
Sbjct: 60 LQHL-----------------SEKKAQNTSIQVLVLTPTRELAMQITKAASVYGSNLHWL 102
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
RV IVGGM + Q + L R +++V TPGRL + M G L +HTL VLDEADRM
Sbjct: 103 RVATIVGGMPYKAQIKALSKRIDILVATPGRLIDQMQSGRVDLKNVHTL---VLDEADRM 159
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
++ G ++Q+I+ LP K++QT++FSATI
Sbjct: 160 LDMGFIDDIQTIVAELP------------------------KEKQTMLFSATI 188
>gi|15667450|dbj|BAB68226.1| putative autoaggregation-mediating protein [Enterococcus faecium]
Length = 210
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 132/254 (51%), Gaps = 54/254 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+KS+ R GF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 EKIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGV 193
Query: 410 DFRKKLKHGSLKLK 423
F K H +K K
Sbjct: 194 KFMKNPHHVKIKRK 207
>gi|449692609|ref|XP_004213103.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like, partial
[Hydra magnipapillata]
Length = 208
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 126/243 (51%), Gaps = 48/243 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L LH L K +G +PT IQ +CIP G+ D IG+A+TGSGKT AF LPI+
Sbjct: 5 FTDLGLHEWLNKQCLEMGISKPTEIQVSCIPEIL-SGR-DCIGSAKTGSGKTAAFALPII 62
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q+L E+ P G + ALI+TPTRELA+Q+ D K + K I +
Sbjct: 63 QKLSED-------------------PYG-IFALILTPTRELAIQIADQFKALGKSIGLND 102
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I+GG+ KQ L +P +V+ TPGRL ++ G K L+ + F VLDEADR++E
Sbjct: 103 AVIIGGLDMVKQGMELSNQPHVVIATPGRLASHITSGTKF--SLNKIKFLVLDEADRLLE 160
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 414
+L+ I D + KKRQTL+FSATI + + K+
Sbjct: 161 KSFENDLEVIFDNIA------------------------KKRQTLLFSATITDAINHLKE 196
Query: 415 LKH 417
+ H
Sbjct: 197 VAH 199
>gi|322701026|gb|EFY92777.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Metarhizium
acridum CQMa 102]
Length = 712
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E L L+ + R+G+KEPTPIQ+A IP A D+IG A TGSGKT AF LP+
Sbjct: 272 SWEESGLPQRLLDIVDRVGYKEPTPIQRAAIPIALQAR--DLIGVAVTGSGKTAAFLLPL 329
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + + L E + P ALI+ PTREL Q+ K+ A+ + R
Sbjct: 330 LVYISD--------LPPLTEVNKNDGPY----ALILAPTRELVQQIETEAKKFAEPLGFR 377
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI
Sbjct: 378 CVSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCI---ERRLLVLSQCCYIIMDEADRMI 434
Query: 354 ENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G + I+D LP++N + +E Q + + K RQT++++AT+
Sbjct: 435 DLGFEESVNKILDALPVSNEKPDTDDAENAQLMKSYLGSRDKYRQTMMYTATM 487
>gi|452819711|gb|EME26765.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 414
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 128/233 (54%), Gaps = 47/233 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ EL L ++++ L +PTP Q ACIP + GK DIIG++ETG+GKT++F LPI
Sbjct: 14 SFEELGLGQWIVETCKALNIMKPTPCQVACIPQTLN-GK-DIIGSSETGTGKTMSFVLPI 71
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ +L P G + A+++TPTRELA Q+ D K + +++R
Sbjct: 72 VDKL-------------------SVDPCG-VFAIVLTPTRELAFQIYDQFKAIGNPMSIR 111
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK-HLVELHTLSFFVLDEADRM 352
V +VGG+ + +Q L+ RP +VV TPGRL +L + + LH++ F VLDEADR+
Sbjct: 112 VAVVVGGLESIRQATELENRPHVVVATPGRLADLFTIEDSVERFHLHSIRFLVLDEADRL 171
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+E+G L +I+D+LP+ RQTLV+SAT+
Sbjct: 172 LEDGFASSLSTILDVLPV------------------------NRQTLVYSATM 200
>gi|340923930|gb|EGS18833.1| hypothetical protein CTHT_0054430 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 709
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 146/289 (50%), Gaps = 28/289 (9%)
Query: 118 QKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNE 177
Q +++KNL +KK ++ K + + +E+ +S I W E
Sbjct: 231 QLKEQKNLGKHWSEKKLEEMKERDWRIFKENFGIS----------TKGGSIPNPMRNWEE 280
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
L L+ +YR+G+ EPTPIQ+A IP A D+IG A TGSGKT AF LP++ +
Sbjct: 281 SGLPRRLLDIVYRVGYDEPTPIQRAAIPIALQAR--DLIGVAVTGSGKTAAFLLPLLVYI 338
Query: 238 LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
E L E + P ALI+ PTREL Q+ ++ A + VV I
Sbjct: 339 SE--------LPPLTEYNKNDGPY----ALILAPTRELVQQIESEARKFADPLGFTVVSI 386
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGG S E+Q L+ E++V TPGRL + + E+ L+ + ++DEADRMI+ G
Sbjct: 387 VGGHSLEEQAFALRNGAEIIVATPGRLVDCI---ERRLLVFSQCCYVIMDEADRMIDQGF 443
Query: 358 FRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
L I+D LP++N + + +E Q + + RQT++++AT+
Sbjct: 444 EEPLTKILDALPVSNEKPDTEDAENPQLMSRYLGGRDRYRQTMMYTATM 492
>gi|298482320|ref|ZP_07000507.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
gi|298271607|gb|EFI13181.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
Length = 374
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 129/231 (55%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++K+I G+ PTPIQ+ IP A K DI+G A+TG+GKT +F +PI+
Sbjct: 3 FKELNITEPILKAIEEKGYTVPTPIQEKAIPPAL--AKRDILGCAQTGTGKTASFAIPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L ++E A +G ++ALI+TPTRELALQ+++ + + +K +R
Sbjct: 61 QHLQLDKEAA----RRQG-----------IKALILTPTRELALQISECIDDYSKHTRIRH 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG++ Q LL+ +++V TPGRL +LM+ G H L T+ +FVLDEADRM++
Sbjct: 106 GVIFGGVNQRPQVDLLRKGIDILVATPGRLLDLMTQGHIH---LDTIQYFVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+ LP K++QTL FSAT+
Sbjct: 163 MGFIHDIKRILPKLP------------------------KEKQTLFFSATM 189
>gi|444379626|ref|ZP_21178803.1| ATP-dependent RNA helicase [Enterovibrio sp. AK16]
gi|443676355|gb|ELT83059.1| ATP-dependent RNA helicase [Enterovibrio sp. AK16]
Length = 410
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 123/225 (54%), Gaps = 47/225 (20%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
LHP L +++ LG+ EPT IQ+ IP +GK D++GAA+TG+GKT AF LP++ +LLE
Sbjct: 9 LHPTLQQTLSELGYSEPTDIQQQAIPKVL-EGK-DVMGAAQTGTGKTAAFTLPLIHQLLE 66
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
KG R LI+TPTRELA QV D + E + +++ V + G
Sbjct: 67 R------------------GVKGSARVLIVTPTRELAQQVYDKVAEYGQHTSLKCVALYG 108
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
G + Q+ L +PE++VGTPGRL + + G ++L++L VLDEADRM++ G
Sbjct: 109 GANINPQKNQLAKKPEIIVGTPGRLLDHLHIGT---LQLNSLDTLVLDEADRMLDMGFIS 165
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
+++ ++ +P K+RQTL FSAT
Sbjct: 166 DIKRLMKKMP------------------------KERQTLFFSAT 186
>gi|357495749|ref|XP_003618163.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493178|gb|AES74381.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 666
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 132/240 (55%), Gaps = 24/240 (10%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
++I +W E +L ++K++ + G+K P+PIQ A IP Q D+IG AETGSGK
Sbjct: 241 SKIPRPIRSWVESKLSQEILKAVEKAGYKTPSPIQMASIPLGLQQR--DVIGVAETGSGK 298
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 299 TAAFVLPMLSYITR--------LPPISEENEAEGPY----AVVMAPTRELAQQIEDETVK 346
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
A+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ V
Sbjct: 347 FAQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCL---ERRYAVLNQCNYVV 403
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
LDEADRMI+ G ++ ++D +P +N E + E+ +R R T +FSAT+
Sbjct: 404 LDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDE-------KRIYRTTYMFSATM 456
>gi|300312872|ref|YP_003776964.1| ATP-dependent RNA helicase [Herbaspirillum seropedicae SmR1]
gi|300075657|gb|ADJ65056.1| ATP-dependent RNA helicase protein [Herbaspirillum seropedicae
SmR1]
Length = 487
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 129/244 (52%), Gaps = 48/244 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P ++K++ G+ PTPIQ IP QG+ D++GAA+TG+GKT F LPI+
Sbjct: 18 FEDFGLSPDILKALAEQGYVHPTPIQAQAIPVVL-QGR-DVMGAAQTGTGKTAGFSLPII 75
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
QRLL+ + +P H +RALI+TPTRELA QV D++ + +R
Sbjct: 76 QRLLQHASHSA-------------SPARHPVRALILTPTRELADQVADNVAAYCRFTPLR 122
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG+ Q +L+A E+V+ TPGRL + + ++ V L V+DEADRM+
Sbjct: 123 STVVFGGVDMAPQTAILRAGVEIVIATPGRLLDHV---QQKTVNLSQTQILVMDEADRML 179
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LS 408
+ G +LQ II++LP K+RQ L+FSAT + L+
Sbjct: 180 DMGFLPDLQRIINLLP------------------------KQRQNLLFSATFSPEIKKLA 215
Query: 409 ADFR 412
A F+
Sbjct: 216 ASFQ 219
>gi|407919354|gb|EKG12604.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 791
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 122/239 (51%), Gaps = 49/239 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ + L ++K + +GF EPTPIQ IP A GK D++G A TGSGKT AF +PI
Sbjct: 276 SFQHMSLSRPILKGLAAVGFSEPTPIQAKTIPVAL-LGK-DVVGGAVTGSGKTAAFVIPI 333
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKEVAKGIN 291
++RLL Y PK R I+ PTRELA+Q + K++A +
Sbjct: 334 LERLL-------------------YRPKKVPTTRVAILMPTRELAVQCFNVSKKLAAFTD 374
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ IVGG S +QE +LK RP++V+ TPGR + M V+ TL VLDEADR
Sbjct: 375 ITFAQIVGGFSLREQENILKQRPDVVIATPGRFIDHMRNSASFAVD--TLEILVLDEADR 432
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
M+E+G EL I+ +P K RQT++FSAT+ + D
Sbjct: 433 MLEDGFADELNEILTTIP------------------------KSRQTMLFSATMTDTVD 467
>gi|89074254|ref|ZP_01160744.1| putative ATP-dependent RNA helicase, DEAD box family protein
[Photobacterium sp. SKA34]
gi|89049958|gb|EAR55492.1| putative ATP-dependent RNA helicase, DEAD box family protein
[Photobacterium sp. SKA34]
Length = 427
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 124/236 (52%), Gaps = 38/236 (16%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ L LHP L+K++ LG+ PT +Q+ IP A D++ A+TG+GKT AF LP+
Sbjct: 2 SFQSLNLHPNLLKALTDLGYSTPTDVQQQAIPLALKGD--DVMAGAQTGTGKTAAFTLPL 59
Query: 234 MQRLL---EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
+QRL+ + E+ +E + K +RALI+TPTRELA QV D + AK
Sbjct: 60 LQRLMTLPSQAEQVSTAVENNQKSRNK------IRALILTPTRELAQQVFDSITTYAKYT 113
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
++V GG S Q + L A E++V TPGRL + + G L E+ T FVLDEAD
Sbjct: 114 EIKVAVAYGGTSMNVQVKALNAGAEILVATPGRLLDHVFNGSVSLSEVET---FVLDEAD 170
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
RM++ G ++Q I+ +P +RQTL FSAT +
Sbjct: 171 RMLDMGFIVDIQRIMKRMP------------------------AERQTLFFSATFS 202
>gi|50286247|ref|XP_445552.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661437|sp|Q6FW42.1|DRS1_CANGA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49524857|emb|CAG58463.1| unnamed protein product [Candida glabrata]
Length = 725
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 126/232 (54%), Gaps = 46/232 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+N+L L +MK + LG+ +P+PIQ A IP A GK DII A TGSGKT AF +PI+
Sbjct: 208 FNDLALSRPVMKGLSNLGYVKPSPIQSATIPIAL-LGK-DIIAGAVTGSGKTAAFMIPII 265
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-NVR 293
+RLL K A R +++TPTRELA+QV D K++ + + N+
Sbjct: 266 ERLLY-----------------KPAKVASTRVIVLTPTRELAIQVADVGKKIGQFVSNLT 308
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VGG++ +QE++LK RP++V+ TPGR + + V+ ++ V+DEADRM+
Sbjct: 309 FGLAVGGLNLRQQEQMLKTRPDIVIATPGRFIDHIRNSASFNVD--SVEVLVIDEADRML 366
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
E+G EL I+ +LP KRQTL+FSAT+
Sbjct: 367 EDGFQDELNEIMSLLP------------------------SKRQTLLFSATM 394
>gi|374336577|ref|YP_005093264.1| DEAD/DEAH box helicase [Oceanimonas sp. GK1]
gi|372986264|gb|AEY02514.1| DEAD/DEAH box helicase [Oceanimonas sp. GK1]
Length = 458
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 147/270 (54%), Gaps = 51/270 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ L L+ L+++I+ G+ +PTPIQ+ IP G D++ A+TG+GKT FGLP+
Sbjct: 2 SFASLGLNDNLVQAIHECGYTQPTPIQQQAIPLVLKGG--DLLAGAQTGTGKTAGFGLPM 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+QRL E + + A AP +RAL++TPTRELA QV ++L+ AK ++R
Sbjct: 60 LQRLSETKAR---------PLANGRAP---VRALVLTPTRELAAQVEENLRAYAKHTDLR 107
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ + GG+S Q + L + ++VV TPGRL + +S + ++L + VLDEADRM+
Sbjct: 108 TLVMFGGVSINPQMKALGRKVDIVVATPGRLLDHVS---QRSIDLSRVEMLVLDEADRML 164
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LS 408
+ G R+++ I+ +LP K+RQ L+FSAT + L+
Sbjct: 165 DMGFIRDIRRILALLP------------------------KQRQNLLFSATFSDEIKTLA 200
Query: 409 ADFRKKLKHGSLKLKQSVNGLNSIETLSER 438
D + +H + + + + ET+S+R
Sbjct: 201 EDLLHQPEHIEVARRNA-----TAETISQR 225
>gi|239825779|ref|YP_002948403.1| DEAD/DEAH box helicase [Geobacillus sp. WCH70]
gi|239806072|gb|ACS23137.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. WCH70]
Length = 466
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 130/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L LMK+I R+GF+E TPIQ IP + Q K D+IG A+TG+GKT AFG+P++
Sbjct: 4 FHELGLSNELMKAIRRMGFEETTPIQAETIPLSL-QNK-DVIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ + E ++ L++ PTRELA+QV++ L ++ VRV
Sbjct: 62 EKVDVKNEA--------------------IQGLVVAPTRELAIQVSEELYKIGAVKRVRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG E+Q R LK RP ++VGTPGR+ + ++ L +HT+ VLDEAD M+
Sbjct: 102 LPIYGGQDIERQIRALKKRPHIIVGTPGRIIDHINRKTLRLDNVHTV---VLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P +KRQTL+FSAT+
Sbjct: 159 MGFIDDIEAILSNVP------------------------EKRQTLLFSATM 185
>gi|19113831|ref|NP_592919.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1175401|sp|Q09719.1|DBP10_SCHPO RecName: Full=ATP-dependent RNA helicase dbp10
gi|914885|emb|CAA90465.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe]
Length = 848
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 48/240 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L+ L+++I++ GFK PTPIQ+ IP +G+ D++G A TGSGKT AF +P++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLL-EGR-DVVGMARTGSGKTAAFVIPMI 128
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ L + + RALI++P RELALQ +K+ +KG ++R
Sbjct: 129 EHL------------------KSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRS 170
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V IVGG+S E+Q LL +P++VV TPGR L + +EL ++ + V DEADR+ E
Sbjct: 171 VAIVGGVSLEEQFSLLSGKPDIVVATPGRFLHLKV---EMKLELSSIEYVVFDEADRLFE 227
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS-ADFRK 413
G +L I+ LP + RQTL+FSAT+ + DF K
Sbjct: 228 MGFAAQLTEILHALPTS------------------------RQTLLFSATLPRTLVDFAK 263
>gi|300690871|ref|YP_003751866.1| DEAD/DEAH box helicase [Ralstonia solanacearum PSI07]
gi|299077931|emb|CBJ50571.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
PSI07]
gi|344167288|emb|CCA79493.1| ATP-dependent RNA helicase, deaD-box family [blood disease
bacterium R229]
Length = 495
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 133/259 (51%), Gaps = 49/259 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
S FD + LHP +++++ G+ PTPIQ A IP G+ D++GAA+TG+GKT
Sbjct: 14 SVTFDTFG---LHPDILRALAESGYTRPTPIQAAAIPVVV-AGR-DVMGAAQTGTGKTAG 68
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVA 287
F LPI+Q LL E + +P H +RALI+TPTRELA QV D++ +
Sbjct: 69 FSLPIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYG 115
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K +R + GG+ Q L+ E++V TPGRL + + ++ V L + VLD
Sbjct: 116 KYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLD 172
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 173 EADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSP 208
Query: 408 SADFRKKLKHGSLKLKQSV 426
KKL L+ Q++
Sbjct: 209 EI---KKLAASYLRHPQTI 224
>gi|297744770|emb|CBI38032.3| unnamed protein product [Vitis vinifera]
Length = 797
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 132/242 (54%), Gaps = 28/242 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
++I +W E +L L+K++ R G+K P+PIQ A IP Q D+IG AETGSGK
Sbjct: 299 SKIPRPMRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQR--DVIGIAETGSGK 356
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 357 TAAFVLPMLTYI--------SRLPPMSEENEAEGPY----AVVMAPTRELAQQIEDETVK 404
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
A + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ V
Sbjct: 405 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVV 461
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSA 403
LDEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSA
Sbjct: 462 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSA 512
Query: 404 TI 405
T+
Sbjct: 513 TM 514
>gi|150863785|ref|XP_001382380.2| pre-mRNA splicing factor RNA helicase of DEAD box family
[Scheffersomyces stipitis CBS 6054]
gi|158514818|sp|A3LNL1.2|PRP28_PICST RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|149385041|gb|ABN64351.2| pre-mRNA splicing factor RNA helicase of DEAD box family
[Scheffersomyces stipitis CBS 6054]
Length = 482
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 137/245 (55%), Gaps = 26/245 (10%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIY-RLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSG 224
+I WNE + L+ I +L + EPTPIQ+A IP A +Q D++G AETGSG
Sbjct: 49 GDIDNPLRTWNEASIPSKLLSIIVDKLEYLEPTPIQRAAIPLALNQR--DVVGIAETGSG 106
Query: 225 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKY-APKGHLRALIITPTRELALQVTDHL 283
KTLAF +P++ +L + LE + ++ + Y P G LI+ PTRELA Q+T
Sbjct: 107 KTLAFLIPLLSYILNTDKN---YLEYEHQQEQNYNKPLG----LILAPTRELAQQITKEA 159
Query: 284 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 343
++ + + VV I+GG E+ ++ +VV TPGRL + + E++++ L +
Sbjct: 160 QKFGDRLGLNVVSIIGGHQYEETVHSIRTGVHVVVATPGRLVDSL---ERNIIGLDKCYY 216
Query: 344 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL--QRKKRQTLVF 401
++DEADRMI+ G + LQSI+ +P T+ N T+ S+ KKR TL+F
Sbjct: 217 LIMDEADRMIDMGFEKALQSILSYVPSTDRLNS----------TIDSMIFHIKKRITLMF 266
Query: 402 SATIA 406
+ATI+
Sbjct: 267 TATIS 271
>gi|266619246|ref|ZP_06112181.1| ATP-dependent RNA helicase RhlE [Clostridium hathewayi DSM 13479]
gi|288869241|gb|EFD01540.1| ATP-dependent RNA helicase RhlE [Clostridium hathewayi DSM 13479]
Length = 432
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 68/290 (23%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L L+K++ G+ P+PIQ+ IP GK D++G A+TG+GKT AF LPI+
Sbjct: 3 FKDLQLSAPLLKALEEKGYTTPSPIQEKAIPHVL-AGK-DVLGCAQTGTGKTAAFALPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L+ +K K++ K +R+LI+TPTRELALQ+ ++ KE VR
Sbjct: 61 QNLMRPSDK-------------KHS-KRVIRSLILTPTRELALQIAENFKEYGSHTPVRC 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S Q + L+ +++V TPGRL +L+ GE + L + FVLDEADRM++
Sbjct: 107 AVIFGGVSAVPQIKELQRGIDILVATPGRLNDLIHQGE---ISLSHVEMFVLDEADRMLD 163
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 414
G +++ II +LP+ K+QTL+FSAT+
Sbjct: 164 MGFIHDVKKIISLLPV------------------------KKQTLLFSATMP-------- 191
Query: 415 LKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESF 464
I+ L+E+ + N A+V++T VS + + +E+S
Sbjct: 192 ---------------PEIQALTEK--LLHNPAVVEVTPVSSIVDLIEDSL 224
>gi|355683260|gb|AER97066.1| DEAD box polypeptide 24 [Mustela putorius furo]
Length = 702
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 110/210 (52%), Gaps = 21/210 (10%)
Query: 257 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 316
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMS +KQ+R+L +PE+
Sbjct: 241 KAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSAQKQQRMLNRQPEI 300
Query: 317 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 376
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 301 VVATPGRLWELIKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 352
Query: 377 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 436
S KRQTL+FSAT+ L ++ H K ++ L
Sbjct: 353 -----------SDSQYNPKRQTLIFSATLTLVHQAPARILHKKHIKKIDKTA--KLDLLV 399
Query: 437 ERAGMRANVAIVDLTNVSVLANKLEESFIE 466
++ GMR ++DLT L E+ I
Sbjct: 400 QKIGMRGKPKVIDLTRNEATVETLTETKIH 429
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
+ AW +L + +++++ LGF PTPIQ + A A + K+DI+GAAETGSGKTLAF
Sbjct: 54 DVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTL-APAIRDKLDILGAAETGSGKTLAFA 112
Query: 231 LPIMQRLLEEREK 243
+P++ +L+ + K
Sbjct: 113 IPMIHAVLQWQMK 125
>gi|403217172|emb|CCK71667.1| hypothetical protein KNAG_0H02520 [Kazachstania naganishii CBS
8797]
Length = 754
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 127/234 (54%), Gaps = 46/234 (19%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
+ +N L L ++K + LG+ +P+PIQ A IP A QGK D+I A TGSGKT AF +P
Sbjct: 239 ETFNSLSLSRPVLKGLAHLGYTKPSPIQSATIPVAL-QGK-DVIAGAVTGSGKTAAFMIP 296
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
I++RLL + K R +++TPTRELA+Q++D K++ + ++
Sbjct: 297 IIERLLFKPSKVAMT-----------------RVIVLTPTRELAIQISDVAKKIGQFVSG 339
Query: 293 RVVPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ VGG++ +QE+ LKARP++V+ TPGR + + V+ ++ VLDEADR
Sbjct: 340 LTFGLAVGGLNLRQQEQALKARPDIVIATPGRFIDHIRNSASFNVD--SVEILVLDEADR 397
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M+E G EL+ I+ MLP KRQ L+FSAT+
Sbjct: 398 MLEEGFQDELKEIMTMLP------------------------SKRQNLLFSATM 427
>gi|421145364|ref|ZP_15605243.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395488237|gb|EJG09113.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 528
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFIEDIEKI---LTFTN 179
>gi|402574642|ref|YP_006623985.1| DNA/RNA helicase [Desulfosporosinus meridiei DSM 13257]
gi|402255839|gb|AFQ46114.1| DNA/RNA helicase, superfamily II [Desulfosporosinus meridiei DSM
13257]
Length = 500
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L L+M+SI +GF+E TPIQ+ IP+A +GK D+IG A+TG+GKT A+G+P++
Sbjct: 4 FTDLNLSELVMRSIINMGFEETTPIQEQTIPSAM-EGK-DLIGQAQTGTGKTAAYGIPLV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+R++ + E +++ +++ PTRELA+QV + L ++ + +
Sbjct: 62 ERIMGQSE--------------------NIQGIVLAPTRELAVQVAEELNKIGQFKRIHA 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG + Q R LK RP ++V TPGRL + M + + LH + VLDEAD M+
Sbjct: 102 LPIYGGQGIDWQIRALKKRPHIIVATPGRLMDHM---RRKTIRLHDIKIVVLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P ++RQTL+FSAT+
Sbjct: 159 MGFLEDIETILKEVP------------------------EERQTLLFSATM 185
>gi|346322626|gb|EGX92225.1| DEAD/DEAH box helicase, putative [Cordyceps militaris CM01]
Length = 744
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 128/232 (55%), Gaps = 18/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L P L+ I +G++EPTPIQ+A IP A D+IG A TGSGKT AF LP++
Sbjct: 295 WKESGLPPRLLAIIEHVGYEEPTPIQRAAIPIALL--ARDLIGVAVTGSGKTAAFLLPLL 352
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ + L GE + P ALI+ PTREL Q+ K+ + + R
Sbjct: 353 VYISD--------LPPLGETNKNDGPY----ALILAPTRELVQQIEKEAKKFGEPLGFRC 400
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 401 VSIVGGHSLEEQAYALRNGAEIIVATPGRLVDCI---ERRLLVLSQCCYVIMDEADRMID 457
Query: 355 NGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G + +I+D LP++N + ++E + + + RQT++F+AT+
Sbjct: 458 MGFEEPVNTILDALPVSNEKPDTDEAEDGRLMQRYVGEKDRYRQTMMFTATM 509
>gi|358331630|dbj|GAA50408.1| probable ATP-dependent RNA helicase DDX23, partial [Clonorchis
sinensis]
Length = 903
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 140/239 (58%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W E+ P L + I ++G+ +PTPIQ+ IP DIIG AETGSGKT
Sbjct: 113 IPNPLRSWAEMDASPELKEVIKKVGYADPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 170
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ E+ P A+I+ PTRELA Q+ + +
Sbjct: 171 AFLIPLLNWI----QSLPKL--ERMEDTEQ-GPY----AIIMAPTRELAQQIEEETVKFG 219
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + ++ V ++GG+S E+Q L+ E+V+GTPGRL +++ E + L+ ++ VLD
Sbjct: 220 RALGIKTVSLIGGLSREEQALKLRMGAEIVIGTPGRLNDVL---ENRYIVLNQCTYVVLD 276
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
EAD+MI+ G E+ +I+ LP+TN + + +E ++ + + K RQT++F+AT+
Sbjct: 277 EADKMIDMGFEPEVNNILSYLPVTNEKPDTEDAEDDSKLLSNFATKHKYRQTVMFTATM 335
>gi|423721477|ref|ZP_17695659.1| DEAD/DEAH box helicase family protein [Geobacillus
thermoglucosidans TNO-09.020]
gi|383365528|gb|EID42823.1| DEAD/DEAH box helicase family protein [Geobacillus
thermoglucosidans TNO-09.020]
Length = 465
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 130/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L LMK+I R+GF+E TPIQ IP + Q K D+IG A+TG+GKT AFG+P++
Sbjct: 4 FYELGLSNELMKAIRRMGFEETTPIQAETIPLSL-QNK-DVIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ + EA ++ L++ PTRELA+QV++ L ++ VRV
Sbjct: 62 EKV------------DVTNEA--------IQGLVVAPTRELAIQVSEELYKIGAVKRVRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK RP ++VGTPGR+ + ++ HL +HT+ VLDEAD M+
Sbjct: 102 LPIYGGQDIGRQIRALKKRPHIIVGTPGRIIDHINRKTLHLENVHTV---VLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P +KRQTL+FSAT+
Sbjct: 159 MGFIDDIEAILSNVP------------------------EKRQTLLFSATM 185
>gi|299470469|emb|CBN78461.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1012
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 143/250 (57%), Gaps = 20/250 (8%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L +M++I LG+++P+PIQ+ IP + DIIG AETGSGKT AFG+P++
Sbjct: 578 WEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGME--RRDIIGIAETGSGKTAAFGIPMI 635
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+L +AG ++ A +G L ALI+ PTRELA+Q+ + K+ K +
Sbjct: 636 AYILSL--EAGMR--------DRVADQGPL-ALIMAPTRELAIQIEEECKKFCKFAGLNT 684
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG E Q L+ E+++GTPGRL + + EKH + L+ ++ VLDEADRMI+
Sbjct: 685 VCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCV---EKHYLVLNQCNYVVLDEADRMID 741
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQ--SEQTQTCVTVSSLQRKKRQTLVFSATI--ALSAD 410
G ++ ++++ + T +++ + +Q + S R T +FSAT+ A+
Sbjct: 742 MGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKM 801
Query: 411 FRKKLKHGSL 420
+K L+H ++
Sbjct: 802 AKKYLRHPAI 811
>gi|312112527|ref|YP_003990843.1| DEAD/DEAH box helicase [Geobacillus sp. Y4.1MC1]
gi|336236996|ref|YP_004589612.1| DEAD/DEAH box helicase [Geobacillus thermoglucosidasius C56-YS93]
gi|311217628|gb|ADP76232.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. Y4.1MC1]
gi|335363851|gb|AEH49531.1| DEAD/DEAH box helicase domain protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 465
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 130/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L LMK+I R+GF+E TPIQ IP + Q K D+IG A+TG+GKT AFG+P++
Sbjct: 4 FYELGLSNELMKAIRRMGFEETTPIQAETIPLSL-QNK-DVIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ + EA ++ L++ PTRELA+QV++ L ++ VRV
Sbjct: 62 EKV------------DVTNEA--------IQGLVVAPTRELAIQVSEELYKIGAVKRVRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK RP ++VGTPGR+ + ++ HL +HT+ VLDEAD M+
Sbjct: 102 LPIYGGQDIGRQIRALKKRPHIIVGTPGRIIDHINRKTLHLENVHTV---VLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P +KRQTL+FSAT+
Sbjct: 159 MGFIDDIEAILSNVP------------------------EKRQTLLFSATM 185
>gi|27468597|ref|NP_765234.1| ATP-dependent RNA helicase [Staphylococcus epidermidis ATCC 12228]
gi|418607526|ref|ZP_13170756.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU057]
gi|81843521|sp|Q8CRP6.1|Y1679_STAES RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SE_1679
gi|27316144|gb|AAO05278.1|AE016749_224 ATP-dependent RNA helicase [Staphylococcus epidermidis ATCC 12228]
gi|374404380|gb|EHQ75354.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU057]
Length = 509
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 133/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q ++LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKVLKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|50419843|ref|XP_458454.1| DEHA2C17534p [Debaryomyces hansenii CBS767]
gi|74659385|sp|Q6BTL5.1|DRS1_DEBHA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49654120|emb|CAG86536.1| DEHA2C17534p [Debaryomyces hansenii CBS767]
Length = 771
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 52/252 (20%)
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
D EE ++ ++ T F + L+L ++K + +LG+ +P+PIQ ACIP A GK DI+
Sbjct: 245 DEEEATTAKKQLHTTFQS---LQLSRPVLKGLSQLGYTKPSPIQSACIPIAL-LGK-DIV 299
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRE 274
A TGSGKT A+ +PI++RLL Y P R +++ PTRE
Sbjct: 300 AGAVTGSGKTAAYMIPIIERLL-------------------YKPAKISSTRVIVLAPTRE 340
Query: 275 LALQVTDHLKEVAKGIN-VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
LA+QV D K++ + +N + VGG++ +QE+ LK RP++V+ TPGRL + +
Sbjct: 341 LAIQVCDVGKKIGQFVNNLNFGLAVGGLNLRQQEQQLKTRPDIVIATPGRLIDHIRNSPS 400
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 393
++ +L V+DEADRM++ G EL I+ ++P R
Sbjct: 401 FSID--SLEVLVIDEADRMLDEGFQAELTEILSLIP-----------------------R 435
Query: 394 KKRQTLVFSATI 405
KRQTL++SAT+
Sbjct: 436 HKRQTLLYSATM 447
>gi|187479233|ref|YP_787258.1| ATP-dependent RNA helicase [Bordetella avium 197N]
gi|115423820|emb|CAJ50371.1| putative ATP-dependent RNA helicase [Bordetella avium 197N]
Length = 477
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 129/244 (52%), Gaps = 43/244 (17%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
S A S E + + LHPLL+KSI G+ PTPIQ IP A +G+ D++GAA+TG+
Sbjct: 6 SSAAPSAEALTFADFGLHPLLLKSIAETGYTSPTPIQAQAIPVVA-EGR-DVMGAAQTGT 63
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDH 282
GKT AF LPI+ RL+ + +P H +RALI+TPTRELA QV ++
Sbjct: 64 GKTAAFTLPILHRLMPLANSSA-------------SPARHPVRALILTPTRELADQVYEN 110
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
+K + +R + GG+ Q+ L+ E++V TPGRL + + E+ V L +
Sbjct: 111 VKRYSLHTPLRSAVVFGGVDIGPQKEALRQGCEVLVATPGRLLDHV---EQKNVNLSQVG 167
Query: 343 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 402
VLDEADRM++ G +L+ II +LP +RQ L+FS
Sbjct: 168 ILVLDEADRMLDMGFLPDLERIIRLLP------------------------PQRQGLLFS 203
Query: 403 ATIA 406
AT +
Sbjct: 204 ATFS 207
>gi|241766543|ref|ZP_04764404.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
gi|241363218|gb|EER58791.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
Length = 415
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 128/234 (54%), Gaps = 47/234 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++ L L P L+++ +GF PTP+Q A IPA D++G+A+TGSGKT AF LP++
Sbjct: 3 FSALGLSPALVQAATAMGFSAPTPVQSAAIPAVLR--GADVLGSAQTGSGKTAAFALPLL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI--NV 292
QRL + + A + H+RALI+ PTRELA QV + ++ + +G+ V
Sbjct: 61 QRLQADAQNAPR----------------HVRALILVPTRELAAQVGEVIRSLGRGLPQPV 104
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
+V + GG+S Q L+ ++VV TPGRL +L+ E + + L ++ VLDEADR+
Sbjct: 105 KVAVVFGGVSINPQMMGLRGGADVVVATPGRLLDLV---EHNALRLGSVEHLVLDEADRL 161
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
++ G ELQ I+ +LP+ +RQ L+FSAT A
Sbjct: 162 LDLGFAEELQRILQLLPV------------------------RRQNLLFSATFA 191
>gi|82539888|ref|XP_724299.1| U5 snRNP 100 kD protein [Plasmodium yoelii yoelii 17XNL]
gi|23478899|gb|EAA15864.1| U5 snRNP 100 kD protein [Plasmodium yoelii yoelii]
Length = 967
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L L+K+I + +++PTPIQ IP A D+IG AETGSGKT AF LP++
Sbjct: 545 WEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEMR--DLIGIAETGSGKTAAFVLPML 602
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K L E + P ALII P+RELA+Q+ D + A + R
Sbjct: 603 SYV--------KQLPPLTYETSQDGP----YALIIAPSRELAIQIYDETNKFASYCSCRT 650
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG + E Q L+ E+V+GTPGRL + + EK L+ ++ ++DEADRM++
Sbjct: 651 VAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCL---EKAYTVLNQCNYVIIDEADRMMD 707
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
G + I+D +P +N +E + Q + + R R T +FSAT+ S +
Sbjct: 708 MGFEDAVHFILDNIPTSNLKSEDDALALQEEMMAKAGHRLYRLTQMFSATMPPSVE 763
>gi|449275677|gb|EMC84446.1| putative ATP-dependent RNA helicase DDX23 [Columba livia]
Length = 795
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 382 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 439
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 440 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 488
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 489 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 545
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P+TN ++E + + + S + K RQT++F+AT
Sbjct: 546 EADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 604
Query: 405 I 405
+
Sbjct: 605 M 605
>gi|19705271|ref|NP_602766.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19713234|gb|AAL94065.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 528
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKILKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFVEDIEKI---LTFTN 179
>gi|340759001|ref|ZP_08695578.1| ATP-dependent RNA helicase [Fusobacterium varium ATCC 27725]
gi|251835856|gb|EES64394.1| ATP-dependent RNA helicase [Fusobacterium varium ATCC 27725]
Length = 527
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 111/182 (60%), Gaps = 25/182 (13%)
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 244
+K++ + G+++PTPIQ IPA G+ DIIG A+TG+GKT AF LPI++R
Sbjct: 17 IKALSKKGYEKPTPIQALTIPALL-DGEKDIIGQAQTGTGKTAAFSLPILER-------- 67
Query: 245 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTE 304
+ P ++A+++ PTRELA+QV + + +A G +R+ P+ GG S E
Sbjct: 68 -------------FEPGKVVQAIVLAPTRELAIQVAEEMNSLANGKKIRITPVYGGQSIE 114
Query: 305 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 364
Q R LK +++VGTPGR+ +LM ++ L++L L +F+LDEAD M+ G +++ I
Sbjct: 115 FQIRQLKKGTDIIVGTPGRVMDLM---DRKLIKLDNLKYFILDEADEMLNMGFLEDVEKI 171
Query: 365 ID 366
++
Sbjct: 172 LE 173
>gi|223982748|ref|ZP_03632977.1| hypothetical protein HOLDEFILI_00251 [Holdemania filiformis DSM
12042]
gi|223965288|gb|EEF69571.1| hypothetical protein HOLDEFILI_00251 [Holdemania filiformis DSM
12042]
Length = 424
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 133/231 (57%), Gaps = 45/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NEL +HP ++K+ R+G+ PT IQ+ IP +G+ D++G A+TG+GKT AF LPI+
Sbjct: 3 FNELPIHPSILKNCQRMGYTTPTKIQQKAIPPVL-EGR-DLLGLAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+L+++ +KG+ A ++AL++TPTRELA+Q+ D+ + +G+ ++
Sbjct: 61 DQLMKQ--------PQKGKRA--------IKALVLTPTRELAIQIVDNFQLYGQGLPLKT 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V I GG+ Q LK ++++ TPGRL +L+ + L++L + FVLDEADRM++
Sbjct: 105 VVIFGGVKQGAQVDQLKKGADILIATPGRLLDLVG---QRLLDLSQVEIFVLDEADRMLD 161
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ VS+L K+QTL+FSAT+
Sbjct: 162 MGFIHDVKR------------------------VSALLVNKKQTLLFSATM 188
>gi|296328514|ref|ZP_06871033.1| DEAD/DEAH box family ATP-dependent RNA helicase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296154323|gb|EFG95122.1| DEAD/DEAH box family ATP-dependent RNA helicase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 528
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFVEDIEKI---LTFTN 179
>gi|335998488|ref|ZP_08564399.1| ATP-dependent RNA helicase [Lactobacillus ruminis SPM0211]
gi|335348343|gb|EGM49849.1| ATP-dependent RNA helicase [Lactobacillus ruminis SPM0211]
Length = 506
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 128/234 (54%), Gaps = 49/234 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
F +NEL L L+K+I R GF+E TPIQ+A IP +D+IG A+TG+GKT AFGL
Sbjct: 9 FLKFNELGLEEDLLKAIKRSGFEEATPIQEATIPLVL--AGIDVIGQAQTGTGKTAAFGL 66
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
PI+Q + + E H++A++++PTRELA+Q + L + K
Sbjct: 67 PILQHVDVKEE--------------------HIQAIVVSPTRELAIQTQEELYRLGKDKR 106
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+V + GG +Q +LLK P+++VGTPGRL + ++ + V+L + VLDEAD
Sbjct: 107 AKVQVVYGGADIRRQIKLLKHVPQILVGTPGRLLDHIN---RKTVDLSHVKTLVLDEADE 163
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G ++++II +P ++RQTL+FSAT+
Sbjct: 164 MLDMGFLEDIEAIIKNVP------------------------EERQTLLFSATM 193
>gi|34763211|ref|ZP_00144175.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|256846171|ref|ZP_05551629.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_36A2]
gi|27887121|gb|EAA24228.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|256719730|gb|EEU33285.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_36A2]
Length = 528
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFVEDIEKI---LTFTN 179
>gi|323340095|ref|ZP_08080360.1| ATP-dependent RNA helicase DeaD [Lactobacillus ruminis ATCC 25644]
gi|323092472|gb|EFZ35079.1| ATP-dependent RNA helicase DeaD [Lactobacillus ruminis ATCC 25644]
Length = 506
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 128/234 (54%), Gaps = 49/234 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
F +NEL L L+K+I R GF+E TPIQ+A IP +D+IG A+TG+GKT AFGL
Sbjct: 9 FLKFNELGLEEDLLKAIKRSGFEEATPIQEATIPLVL--AGIDVIGQAQTGTGKTAAFGL 66
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
PI+Q + + E H++A++++PTRELA+Q + L + K
Sbjct: 67 PILQHVDVKEE--------------------HIQAIVVSPTRELAIQTQEELYRLGKDKR 106
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+V + GG +Q +LLK P+++VGTPGRL + ++ + V+L + VLDEAD
Sbjct: 107 AKVQVVYGGADIRRQIKLLKHVPQILVGTPGRLLDHIN---RKTVDLSHVKTLVLDEADE 163
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G ++++II +P ++RQTL+FSAT+
Sbjct: 164 MLDMGFLEDIEAIIKNVP------------------------EERQTLLFSATM 193
>gi|442314863|ref|YP_007356166.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-2]
gi|441483786|gb|AGC40472.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-2]
Length = 376
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 130/234 (55%), Gaps = 46/234 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
F + +L L ++K+I G+ PT IQ+ IP +G+ D+IG A+TG+GKT AF +
Sbjct: 5 FMNFTQLSLSSPILKAISDAGYTTPTAIQEKAIPTIL-EGR-DLIGCAQTGTGKTAAFSI 62
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P++Q +L E K GK +RALI+TPTRELA+Q+ +++++ +K +N
Sbjct: 63 PLLQ-ILSETPKKGK----------------SVRALILTPTRELAIQIQENIEQYSKFLN 105
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
++ + I GG+ KQER L ++++ TPGRL +LM G L+ L + VLDEADR
Sbjct: 106 IKHLSIFGGVPQGKQERALNQGVDILIATPGRLLDLMQQG---LLSLSQIEILVLDEADR 162
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G +++ I+ +P KKRQTL FSAT+
Sbjct: 163 MLDMGFVNDVKKILTKVP------------------------KKRQTLFFSATM 192
>gi|328771766|gb|EGF81805.1| hypothetical protein BATDEDRAFT_16042 [Batrachochytrium
dendrobatidis JAM81]
Length = 584
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 133/244 (54%), Gaps = 18/244 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I W+E L ++ +I R+G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 156 IPNPLRTWDECELSETILGAISRIGYKEPTPIQRQAIPMGLQNR--DIIGIAETGSGKTA 213
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
+F +P++ K + E E + +G ALI+ PTRELA Q+ + A
Sbjct: 214 SFVIPML-----------KFITEMPPLTEINSSQGPY-ALILAPTRELAQQIESETSKFA 261
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + V IVGG + E Q L+ +V+ TPGRL + + E+ ++ L ++ V+D
Sbjct: 262 REMGFICVSIVGGHAVEGQAFNLRNGAHIVIATPGRLRDCL---EQRILVLSQCTYVVMD 318
Query: 348 EADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
EADRM++ G +L+ I+D +P++N + +SE Q ++ RQT++FSAT+
Sbjct: 319 EADRMVDMGFEPDLKFILDAMPVSNIKPDSDESENVQLLRELTGKVTPFRQTVMFSATMP 378
Query: 407 LSAD 410
++ +
Sbjct: 379 VAVE 382
>gi|254302223|ref|ZP_04969581.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|422340165|ref|ZP_16421119.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|148322415|gb|EDK87665.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|355370105|gb|EHG17493.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 529
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFVEDIEKI---LTFTN 179
>gi|73662111|ref|YP_300892.1| ATP-dependent RNA helicase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123643052|sp|Q49Z29.1|Y802_STAS1 RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SSP0802
gi|72494626|dbj|BAE17947.1| putative ATP-dependent RNA helicase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 506
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 131/226 (57%), Gaps = 36/226 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + + +++ +GF E TPIQK IP A +GK D++G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKMAETLQSMGFNEATPIQKESIPLAL-EGK-DVLGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK A + +++LI+ PTRELA+QV + LK AKG N++V
Sbjct: 62 ---------------------EKVADQEGVQSLILAPTRELAMQVAESLKAFAKGQNIQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM ++Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIDRQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
G +++ I+D +P +EQ QT + S+ K QTLV
Sbjct: 158 MGFIDDMKFIMDKIP---------AEQRQTML-FSATMPKAIQTLV 193
>gi|308484167|ref|XP_003104284.1| hypothetical protein CRE_25008 [Caenorhabditis remanei]
gi|308258253|gb|EFP02206.1| hypothetical protein CRE_25008 [Caenorhabditis remanei]
Length = 572
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 130/255 (50%), Gaps = 52/255 (20%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
+N P + +SE ++T+ ++EL + +++ + + TP+Q ACIP
Sbjct: 24 TNAPQPVQ---ISEENMTTK--KFSELGVSSWIIQQLQTMHISTATPVQAACIPKILSGS 78
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 271
DI+G A TG+GKTLAF +PI+Q+L + P G + ALI+TP
Sbjct: 79 --DILGCARTGTGKTLAFAIPILQKLSID-------------------PYG-IYALILTP 116
Query: 272 TRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
TRELA Q+ D V K I ++ IVGG S Q R L RP +VV TPGRL +L++
Sbjct: 117 TRELAFQIADQFSAVGKPITLKCSVIVGGRSLIHQARELSDRPHIVVATPGRLADLINSD 176
Query: 332 EKHLVELH-TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS 390
+ + ++ + FFVLDEADRM+E + +L+ I + +P
Sbjct: 177 AEIIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFEAIPA-------------------- 216
Query: 391 LQRKKRQTLVFSATI 405
KRQTL+ SATI
Sbjct: 217 ----KRQTLLLSATI 227
>gi|399219035|emb|CCF75922.1| unnamed protein product [Babesia microti strain RI]
Length = 635
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 137/243 (56%), Gaps = 17/243 (6%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W+E +L L++++ G+ +PTPIQ IP A D+IG AETGSGKT AF LP+
Sbjct: 225 SWDESKLPKELLEAVKVAGYNKPTPIQMQAIPIALEMR--DLIGIAETGSGKTAAFVLPM 282
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + K+ +L+++ + Y+ L++ P+RELA+Q+ D ++ A R
Sbjct: 283 LAYV-----KSLPLLDDETGQDGPYS-------LVLAPSRELAIQIYDETRKFAAYCECR 330
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ IVGG S E Q L+ E+++GTPGR+ + + ++ + L+ ++ +LDEADRM+
Sbjct: 331 AIVIVGGRSVESQAFELRRGTEIIIGTPGRIKDCL---DRAYIVLNQCNYVILDEADRMV 387
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 413
+ G + I+D +P TN E + + + + R+ R T +FSAT+++ +K
Sbjct: 388 DMGFEEVVNDILDKIPSTNLKAEDEDTAYEQELMSKAGHRRYRITQMFSATMSIDRLMKK 447
Query: 414 KLK 416
L+
Sbjct: 448 YLR 450
>gi|309776780|ref|ZP_07671754.1| ATP-dependent RNA helicase RhlE [Erysipelotrichaceae bacterium
3_1_53]
gi|308915528|gb|EFP61294.1| ATP-dependent RNA helicase RhlE [Erysipelotrichaceae bacterium
3_1_53]
Length = 438
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 128/231 (55%), Gaps = 48/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ L + ++K+I G+ PTPIQ+ IP A QG+ DI+G A+TG+GKT AF +P +
Sbjct: 3 FQTLNITEPILKAINEQGYLTPTPIQEQAIPYAL-QGR-DILGCAQTGTGKTAAFSIPTI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q LL EK ++R+LI+TPTRELA+Q+ +++ AK +R
Sbjct: 61 Q-LLNRHEKR------------------YIRSLIVTPTRELAIQIQENICAYAKHTGIRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ + QER+LKA +++V TPGRL +L+ G +V++ + F+LDEADRM++
Sbjct: 102 AVIFGGVPQKPQERILKAGVDILVATPGRLNDLIQQG---IVDIGRIEIFILDEADRMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ +I LP KK+QTL FSAT+
Sbjct: 159 MGFLPDVKRLIAKLP------------------------KKKQTLFFSATM 185
>gi|409051554|gb|EKM61030.1| hypothetical protein PHACADRAFT_24252 [Phanerochaete carnosa
HHB-10118-sp]
Length = 793
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 199/450 (44%), Gaps = 102/450 (22%)
Query: 1 MAVGSPTLTYEHSKETKPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELD 60
MA +T + ET P+ +T+ E +LN L + S DP+ NE
Sbjct: 1 MAADDFVMTIDSDDETGPSELSKTKDIAEEAQLN-LDFVFDLSG---DPY------NE-- 48
Query: 61 GGFLSLEEIDEASYNLQIPKPEKGKPGKKTN----------TKKRKRSSANEEDP---GD 107
FLS E++ I K K +P + T KRKR S +E D G
Sbjct: 49 --FLS-----ESNIQDYIKKGTKSEPISVDDIIERRRQHRFTGKRKRDSDDEGDESEEGP 101
Query: 108 GDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTV-EESVTVSNGPDDAEEELVSEA 166
D D +G G E + +++++++ + T EE + G D+ EE S+
Sbjct: 102 ADNDSEGEGEDDEGSEGEMMGLEGEEEEEEEKDPLATSDEEDMKGKGGSDEENEEPASDK 161
Query: 167 EISTE--------------------------FDAWNELRLHPLLMKSIYRLGFKEPTPIQ 200
E S E ++ + L ++K+I L F +PTPIQ
Sbjct: 162 ESSDEDSEKETQAEKDRKTAFFASDAGPVEQHSSFMSMNLSRPVLKAIASLNFTKPTPIQ 221
Query: 201 KACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAP 260
A IP A GK DI+G A TGSGKT AF +P+++RL M E+G++A
Sbjct: 222 AATIPVALL-GK-DIVGNAVTGSGKTAAFMIPMIERL---------MYRERGKKA----- 265
Query: 261 KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGT 320
R +++ PTREL +Q + ++A ++R +VGG+S + QE L+ RP++++ T
Sbjct: 266 -AATRCMVLVPTRELGVQCYEVGTKLAAHTDIRFCLVVGGLSLKSQEVALRTRPDIIIAT 324
Query: 321 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE 380
PGRL + + L TL VLDEADRM+ G EL II P++
Sbjct: 325 PGRLIDHIRN--TPTFTLDTLDILVLDEADRMLSEGFQDELAEIIKSCPVS--------- 373
Query: 381 QTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
RQT++FSAT+ S D
Sbjct: 374 ---------------RQTMLFSATMTDSVD 388
>gi|237742838|ref|ZP_04573319.1| ATP-dependent RNA helicase [Fusobacterium sp. 4_1_13]
gi|229430486|gb|EEO40698.1| ATP-dependent RNA helicase [Fusobacterium sp. 4_1_13]
Length = 528
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFVEDIEKI---LTFTN 179
>gi|242371572|ref|ZP_04817146.1| ATP-dependent RNA helicase [Staphylococcus epidermidis M23864:W1]
gi|242350724|gb|EES42325.1| ATP-dependent RNA helicase [Staphylococcus epidermidis M23864:W1]
Length = 525
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 131/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 20 FKELGISDKTVQTLESMGFKEPTPIQKDSIPYALKGD--DILGQAQTGTGKTGAFGIPLI 77
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G+E +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 78 EKVV-------------GQEG--------VQSLILAPTRELAMQVAEQLREFSKGQRVQV 116
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM ++Q + LK P++VVGTPGR+ + ++ + ++ H + +LDEAD M+
Sbjct: 117 VTVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLN---RRTLKTHDIHTLILDEADEMMN 173
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +RQT++FSAT+
Sbjct: 174 MGFIDDMRFIMDKIPA-----------------------DQRQTMLFSATM 201
>gi|380690627|gb|AFD93382.1| DEAD box ATP-dependent RNA helicase, partial [Cydia pomonella]
Length = 459
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 138/241 (57%), Gaps = 17/241 (7%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
+I +W E H +M I ++G+K PTPIQ+ IP DIIG AETGSGK
Sbjct: 107 GKIPNPIRSWKEAGFHSDIMDIINKVGYKSPTPIQRQAIPIGLQNR--DIIGVAETGSGK 164
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
TLAF +P++ ++ K +M E+A++ P A+I+ PTRELA Q+ + +
Sbjct: 165 TLAFLIPLLT-WIQSLPKNERM-----EDADQ-GPY----AIILAPTRELAQQIEEETNK 213
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+ + V +VGG+S E+Q L+ E+V+ TPGRL +++ E + L+ ++ V
Sbjct: 214 FGVPLGITSVVVVGGLSREEQGFKLRLGCEIVIATPGRLIDVL---ENRYLVLNRCTYVV 270
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
LDEADRMI+ G ++Q I++ +P++N + +E + + ++K RQT++F+AT
Sbjct: 271 LDEADRMIDMGFEPDVQKILEYMPVSNIKPDTDAAEDASVLLANYNSKKKYRQTVMFTAT 330
Query: 405 I 405
+
Sbjct: 331 M 331
>gi|347524843|ref|YP_004831591.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 27782]
gi|345283802|gb|AEN77655.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 27782]
Length = 497
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NEL L L+K+I R GF+E TPIQ+A IP +D+IG A+TG+GKT AFGLPI+
Sbjct: 3 FNELGLEEDLLKAIKRSGFEEATPIQEATIPLVL--AGIDVIGQAQTGTGKTAAFGLPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q + + E H++A++I+PTRELA+Q + L + K +V
Sbjct: 61 QHVDVKEE--------------------HIQAIVISPTRELAIQTQEELYRLGKDKRAKV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q +LLK P+++VGTPGRL + ++ + V+L + VLDEAD M++
Sbjct: 101 QVVYGGADIRRQIKLLKHVPQILVGTPGRLLDHIN---RKTVDLSHVKTLVLDEADEMLD 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++II +P ++RQTL+FSAT+
Sbjct: 158 MGFLEDIEAIIKNVP------------------------EERQTLLFSATM 184
>gi|321466431|gb|EFX77426.1| hypothetical protein DAPPUDRAFT_213372 [Daphnia pulex]
Length = 478
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 117/233 (50%), Gaps = 48/233 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+N L++ L+K I LG +PTP+Q CIPA G+ D IG TGSGKT AF LPI
Sbjct: 10 TFNSLKIDEWLIKQIKNLGVDKPTPVQINCIPAIL-DGR-DCIGCDRTGSGKTFAFALPI 67
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q L ++ P G + AL++TPTRELA Q+ D + + K IN+R
Sbjct: 68 VQTLSKD-------------------PYG-IYALVLTPTRELAYQIADQFQIIGKPINLR 107
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ IVGGM Q L P +V+ TPGRL + + + T+ + V+DEADR++
Sbjct: 108 MSVIVGGMGMMDQGIELSNHPHIVIATPGRLADHLESCKTF--SFKTIKYLVMDEADRLL 165
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
E +LQ I LP +KRQTL+FSATI
Sbjct: 166 EGNFDEQLQIIFQALP------------------------EKRQTLLFSATIT 194
>gi|66812836|ref|XP_640597.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
gi|74897154|sp|Q54TJ4.1|DDX27_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx27; AltName:
Full=DEAD box protein 27
gi|60468614|gb|EAL66617.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
Length = 783
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 128/238 (53%), Gaps = 45/238 (18%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
+ E + EL L L+K++ +LGF +PTPIQ IP A + GK DI+ +A TGSGKT
Sbjct: 185 VEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALN-GK-DILASASTGSGKTA 242
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF LP+++RLL ++E A +R LI+ PTRELALQ ++ +A
Sbjct: 243 AFLLPVLERLL-------------FRDSEYRA----IRVLILLPTRELALQCQSVMENLA 285
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ N+ IVGG+S + QE L+ P++V+ TPGRL + + H + L L +LD
Sbjct: 286 QFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNA--HGIGLDDLEILILD 343
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EADR+++ G E+ I++ P TN RQT++FSAT+
Sbjct: 344 EADRLLDMGFKDEINKIVESCP-TN-----------------------RQTMLFSATL 377
>gi|373495826|ref|ZP_09586379.1| hypothetical protein HMPREF0402_00252 [Fusobacterium sp. 12_1B]
gi|371966955|gb|EHO84433.1| hypothetical protein HMPREF0402_00252 [Fusobacterium sp. 12_1B]
Length = 527
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 111/182 (60%), Gaps = 25/182 (13%)
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 244
+K++ + G+++PTPIQ IPA G+ DIIG A+TG+GKT AF LPI++R
Sbjct: 17 IKALSKKGYEKPTPIQALTIPALL-DGEKDIIGQAQTGTGKTAAFSLPILER-------- 67
Query: 245 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTE 304
+ P ++A+++ PTRELA+QV + + +A G +R+ P+ GG S E
Sbjct: 68 -------------FEPGKVVQAIVLAPTRELAIQVAEEMNSLANGKKIRITPVYGGQSIE 114
Query: 305 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 364
Q R LK +++VGTPGR+ +LM ++ L++L L +F+LDEAD M+ G +++ I
Sbjct: 115 FQIRQLKKGTDIIVGTPGRVMDLM---DRKLIKLDNLKYFILDEADEMLNMGFLEDVEKI 171
Query: 365 ID 366
++
Sbjct: 172 LE 173
>gi|302499800|ref|XP_003011895.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
gi|291175449|gb|EFE31255.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
Length = 814
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 142/308 (46%), Gaps = 73/308 (23%)
Query: 105 PGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVS 164
P D DEDG+G + E + ++ Q + EE VT S A
Sbjct: 253 PDDLASDEDGSGSESEDDDEIRKQN-----------EFFAPEEQVTESKSTSGAPA---- 297
Query: 165 EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSG 224
++ L L +++ + +GF PTPIQ+ IP A GK D++G A TGSG
Sbjct: 298 ---------SFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALL-GK-DVVGGAVTGSG 346
Query: 225 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDH 282
KT AF +PI++RLL Y P+ R I+ PTRELA+Q +
Sbjct: 347 KTGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNV 387
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
++A ++ +VGG S +QE +LK RP++++ TPGR + M V+ TL
Sbjct: 388 ATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLE 445
Query: 343 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 402
VLDEADRM+E+G EL I+ +P K RQT++FS
Sbjct: 446 ILVLDEADRMLEDGFAEELNEILTTIP------------------------KSRQTMLFS 481
Query: 403 ATIALSAD 410
AT+ S D
Sbjct: 482 ATMTNSVD 489
>gi|358366223|dbj|GAA82844.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 1430
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 148/274 (54%), Gaps = 21/274 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E L LM+ I R+G+KEPTPIQ+A IP A D+IG A TGSGKT AF LP+
Sbjct: 993 SWEESNLPKRLMELISRVGYKEPTPIQRAAIPIAMQNR--DLIGVAVTGSGKTAAFLLPL 1050
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + E + +E E G A+++ PTRELA Q+ K+ +
Sbjct: 1051 LCYIAEL---------PRIDEFEWRKADGPY-AIVLAPTRELAQQIEIEAKKFTGPLGFN 1100
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI
Sbjct: 1101 VVSIVGGHSLEEQAYSLRDGAEIIIATPGRLVDCI---ERRMLVLSQCCYVIMDEADRMI 1157
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSATIALSAD- 410
+ G + I+D LP++N + + + ++ ++ + RQT++++AT+ + +
Sbjct: 1158 DLGFEEPVNKILDALPVSNEKPDSEDAENPLAMSRHINQDHHRYRQTMMYTATMPTAVER 1217
Query: 411 -FRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
RK L+ ++ S +++T+ +R M A
Sbjct: 1218 IARKYLRRPAIVTIGSAG--EAVDTVEQRVEMIA 1249
>gi|340753231|ref|ZP_08690020.1| ATP-dependent RNA helicase [Fusobacterium sp. 2_1_31]
gi|422315292|ref|ZP_16396730.1| hypothetical protein FPOG_02366 [Fusobacterium periodonticum D10]
gi|229422830|gb|EEO37877.1| ATP-dependent RNA helicase [Fusobacterium sp. 2_1_31]
gi|404592614|gb|EKA94414.1| hypothetical protein FPOG_02366 [Fusobacterium periodonticum D10]
Length = 529
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 118/191 (61%), Gaps = 24/191 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K + + G++ PTPIQK IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQKLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E E ++ H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------ENFETSDH-----HIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 108
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +FVLDEAD M+
Sbjct: 109 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFVLDEADEMLN 165
Query: 355 NGHFRELQSII 365
G +++ I+
Sbjct: 166 MGFIEDIEKIL 176
>gi|327264401|ref|XP_003217002.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Anolis
carolinensis]
Length = 820
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P+TN ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAE-DPDKMMANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|421526210|ref|ZP_15972819.1| ATP-dependent RNA helicase [Fusobacterium nucleatum ChDC F128]
gi|402257969|gb|EJU08442.1| ATP-dependent RNA helicase [Fusobacterium nucleatum ChDC F128]
Length = 529
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 116/191 (60%), Gaps = 25/191 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSII 365
G +++ I+
Sbjct: 165 MGFVEDIEKIL 175
>gi|404368270|ref|ZP_10973627.1| hypothetical protein FUAG_02434 [Fusobacterium ulcerans ATCC 49185]
gi|313690084|gb|EFS26919.1| hypothetical protein FUAG_02434 [Fusobacterium ulcerans ATCC 49185]
Length = 527
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 111/182 (60%), Gaps = 25/182 (13%)
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 244
+K++ + G+++PTPIQ IPA G+ DIIG A+TG+GKT AF LPI++R
Sbjct: 17 IKALSKKGYEKPTPIQALTIPALL-DGEKDIIGQAQTGTGKTAAFSLPILER-------- 67
Query: 245 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTE 304
+ P ++A+++ PTRELA+QV + + +A G +R+ P+ GG S E
Sbjct: 68 -------------FEPGKVVQAIVLAPTRELAIQVAEEMNSLANGKKIRITPVYGGQSIE 114
Query: 305 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 364
Q R LK +++VGTPGR+ +LM ++ L++L L +F+LDEAD M+ G +++ I
Sbjct: 115 FQIRQLKKGTDIIVGTPGRVMDLM---DRKLIKLDNLKYFILDEADEMLNMGFLEDVEKI 171
Query: 365 ID 366
++
Sbjct: 172 LE 173
>gi|258563228|ref|XP_002582359.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
gi|237907866|gb|EEP82267.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
Length = 836
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 127/255 (49%), Gaps = 49/255 (19%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIG 217
A EE ++ E S+ + L +++ + +GF PTPIQ+ IP GK D++G
Sbjct: 297 APEENTTDPEGSSSSSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPVGL-LGK-DLVG 354
Query: 218 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTREL 275
A TGSGKT AF +PI++RLL Y P+ R +I+ PTREL
Sbjct: 355 GAVTGSGKTAAFIIPILERLL-------------------YRPRKVPTSRVVILMPTREL 395
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
A+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M
Sbjct: 396 AVQCYNVATKLATYTDITFCQLVGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFT 455
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
V+ TL VLDEADRM+E+G EL I+ +P K
Sbjct: 456 VD--TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KS 489
Query: 396 RQTLVFSATIALSAD 410
RQT++FSAT+ S D
Sbjct: 490 RQTMLFSATMTDSVD 504
>gi|392542118|ref|ZP_10289255.1| ATP-dependent RNA helicase [Pseudoalteromonas piscicida JCM 20779]
Length = 411
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 45/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL+LHP L+ +I LGF+ PTPIQ+ IP D+I +A+TG+GKT AF LPI+
Sbjct: 3 FSELQLHPELLSAITELGFESPTPIQEKSIPLLL--SGFDLIASAQTGTGKTAAFMLPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+L M +GE++ +RALI+TPTRELA QV +H +++ ++ V
Sbjct: 61 HSML--------MGGTQGEKS--------VRALILTPTRELAQQVAEHTEKLVVNTSLNV 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GG + QE+ L+A ++VV TPGRL + + G + L + V DEADRM++
Sbjct: 105 VCLYGGANIGPQEKRLRAGVDVVVATPGRLLDHLIKGT---LTLKNIQHLVFDEADRMLD 161
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G E++ I+ +P+ KRQTL+FSAT+
Sbjct: 162 MGFMGEIKRIMRTMPL------------------------KRQTLLFSATV 188
>gi|365984639|ref|XP_003669152.1| hypothetical protein NDAI_0C02490 [Naumovozyma dairenensis CBS 421]
gi|343767920|emb|CCD23909.1| hypothetical protein NDAI_0C02490 [Naumovozyma dairenensis CBS 421]
Length = 771
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 125/233 (53%), Gaps = 46/233 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++N L L ++K + LG+ +P+PIQ A IP A GK DII A TGSGKT AF +PI
Sbjct: 250 SFNTLSLSRPVLKGLANLGYNKPSPIQSATIPIALL-GK-DIIAGAVTGSGKTAAFMIPI 307
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
++RLL K A R +++TPTRELA+Q+ D K++ K +N
Sbjct: 308 IERLLF-----------------KPAKVSSTRVIVLTPTRELAIQIADVAKKIGKFVNGL 350
Query: 294 VVPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
+ VGG++ +QE++LK RP++V+ TPGR + + V+ ++ V+DEADRM
Sbjct: 351 TFGLAVGGLNLRQQEQILKQRPDIVIATPGRFIDHVRNSASFNVD--SVEILVMDEADRM 408
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+E G EL I+ +LP KRQT++FSAT+
Sbjct: 409 LEEGFQEELNEIMQLLPT------------------------KRQTMLFSATM 437
>gi|163789736|ref|ZP_02184173.1| hypothetical protein CAT7_05876 [Carnobacterium sp. AT7]
gi|159874958|gb|EDP69025.1| hypothetical protein CAT7_05876 [Carnobacterium sp. AT7]
Length = 423
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 126/231 (54%), Gaps = 45/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NEL L+ L+ ++ G+ + TPIQ+ IP + D++G A+TG+GKT AF LPI+
Sbjct: 3 FNELELNQHLLHALKEAGYTKATPIQEDAIPHLLNNK--DLLGCAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q ++EE K KG ++ALI+ PTRELA+Q+ + + AK + + +
Sbjct: 61 QNIMEE----------------KTVGKGAIKALILAPTRELAIQIGESFQTYAKYLPLNI 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S Q LK ++++ TPGRL +L+ G V+L+ + FFVLDEAD M++
Sbjct: 105 QVIFGGVSQNPQTATLKRGTDILIATPGRLLDLIRQG---FVKLNQVEFFVLDEADMMLD 161
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G R+++ II LP KKRQ++ FSAT+
Sbjct: 162 MGMLRDVRHIIRELP------------------------KKRQSMFFSATM 188
>gi|320355280|ref|YP_004196619.1| DEAD/DEAH box helicase [Desulfobulbus propionicus DSM 2032]
gi|320123782|gb|ADW19328.1| DEAD/DEAH box helicase domain protein [Desulfobulbus propionicus
DSM 2032]
Length = 552
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 139/250 (55%), Gaps = 54/250 (21%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
LHP L++++ LGF +PTPIQ+A IP +G+ D+IG A+TG+GKT AFGLP++QR+
Sbjct: 11 LHPDLVQTVTELGFTDPTPIQQAAIPLLL-EGR-DLIGQAQTGTGKTAAFGLPLLQRITP 68
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
++ ++AL++ PTRELA+QV + ++ + + V+ + G
Sbjct: 69 RQQG--------------------VQALVLAPTRELAIQVAEAIQRYGQQRGITVLAVYG 108
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
G + ++Q R L+ E++VGTPGRL +LM+ G ++L T+ VLDEAD M+ G
Sbjct: 109 GQAYQQQIRSLRQGVEVIVGTPGRLLDLMNQGT---LDLTTVRTVVLDEADEMLSMGFVE 165
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSADFRKK 414
+++ I+D +P +RQT++FSATI+ LSA + +
Sbjct: 166 DIELILDRIP------------------------AERQTMLFSATISKRVLGLSARYLRD 201
Query: 415 LKHGSLKLKQ 424
+ S+ KQ
Sbjct: 202 PETVSITPKQ 211
>gi|153809380|ref|ZP_01962048.1| hypothetical protein BACCAC_03694 [Bacteroides caccae ATCC 43185]
gi|423221053|ref|ZP_17207547.1| hypothetical protein HMPREF1061_04320 [Bacteroides caccae
CL03T12C61]
gi|149127966|gb|EDM19188.1| DEAD/DEAH box helicase [Bacteroides caccae ATCC 43185]
gi|392622292|gb|EIY16424.1| hypothetical protein HMPREF1061_04320 [Bacteroides caccae
CL03T12C61]
Length = 375
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 130/231 (56%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++K+I G+ PTPIQ+ IPAA K DI+G A+TG+GKT +F +PI+
Sbjct: 3 FKELNITEPILKAIKEKGYTVPTPIQEKAIPAAL--AKRDILGCAQTGTGKTASFAIPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L + +E+ K + ++ALI+TPTRELALQ+++ + + +K VR
Sbjct: 61 QHL-----------QVVSKESVK---RQGIKALILTPTRELALQISECIDDYSKYTRVRH 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG++ Q +L+ +++V TPGRL +LM+ G HL T+ +FVLDEADRM++
Sbjct: 107 GVIFGGVNQRPQVDMLRKGIDILVATPGRLLDLMNQGHIHL---DTIQYFVLDEADRMLD 163
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+ LP K++QTL FSAT+
Sbjct: 164 MGFIHDIKRILPKLP------------------------KEKQTLFFSATM 190
>gi|212555986|gb|ACJ28440.1| Helicase, DEAD box [Shewanella piezotolerans WP3]
Length = 440
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 134/253 (52%), Gaps = 45/253 (17%)
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
PD A + ++ E + + ++ +L L P L+ ++ L ++ PT IQ++ IPA D
Sbjct: 4 PDPATQATITTVEKAPQLKSFADLGLIPELLATLDALAYQSPTAIQQSTIPAVI--AGSD 61
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
++G A TGSGKT AF LPI+Q L + A++ ++ +LI+ PTRE
Sbjct: 62 VLGGAITGSGKTAAFALPIIQLL--------------AKSAKQTRQSNYVSSLILVPTRE 107
Query: 275 LALQVTDHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 332
LA QV D A+ I N++V+ + GG+ST Q + L+ +++V TPGRL +LMS
Sbjct: 108 LAQQVADSFMRYAQNIKPNLKVLAVYGGVSTNSQMQSLRGGADILVATPGRLLDLMSS-- 165
Query: 333 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 392
+ V+L +S VLDEADRM+ G EL ++++ LP
Sbjct: 166 -NAVKLDKVSSLVLDEADRMLSLGFTDELAALLEKLP----------------------- 201
Query: 393 RKKRQTLVFSATI 405
K+QTL+FSAT
Sbjct: 202 -AKKQTLLFSATF 213
>gi|256088376|ref|XP_002580315.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353230183|emb|CCD76354.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 793
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 139/239 (58%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W E+ + L I ++G+ EPTPIQ+ IP DIIG AETGSGKT
Sbjct: 358 IPNPLRSWAEMNVADELKDVIKKVGYPEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 415
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + ++ K+ E+ E+ E+ P A+I+ PTRELA Q+ + +
Sbjct: 416 AFLIPLLNWI----QRLPKL--ERLEDTEQ-GP----YAIIMAPTRELAQQIEEETVKFG 464
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + ++ V ++GG+S E Q L+ E+V+GTPGRL +++ E + L+ ++ VLD
Sbjct: 465 RPLGIKTVSLIGGLSREDQALKLRMGAEIVIGTPGRLNDVL---ENRYMVLNQCTYIVLD 521
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
EAD+MI+ G E+ +I+ LP+TN + + +E ++ + + K RQT++F+AT+
Sbjct: 522 EADKMIDMGFEPEVNNILTYLPVTNEKPDNEDAEDDSKLLSNFATKHKYRQTVMFTATM 580
>gi|395763810|ref|ZP_10444479.1| ATP-dependent RNA helicase [Janthinobacterium lividum PAMC 25724]
Length = 515
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 130/243 (53%), Gaps = 48/243 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P + +++ G+ PTPIQ+ IP QG+ D++GAA+TG+GKT F LPI+
Sbjct: 39 FADFGLAPEIQRALTDQGYTHPTPIQEQAIPVVL-QGR-DVMGAAQTGTGKTAGFSLPII 96
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
Q L+ + +P H +RALI+TPTRELA+QV +++K AK +R
Sbjct: 97 QLLM-------------AHASSSMSPARHPVRALILTPTRELAVQVAENVKAYAKHTPLR 143
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GGM + Q LL+ E+V+ TPGRL + + E+ + L + V+DEADRM+
Sbjct: 144 STVVFGGMDMKPQTVLLRGGVEIVIATPGRLLDHI---EQKNISLSQVQMLVMDEADRML 200
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LS 408
+ G +LQ II++LP K+RQ L+FSAT + L+
Sbjct: 201 DMGFLPDLQRIINLLP------------------------KQRQNLMFSATFSPEIKKLA 236
Query: 409 ADF 411
A F
Sbjct: 237 ATF 239
>gi|418595150|ref|ZP_13158775.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21342]
gi|374402283|gb|EHQ73315.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21342]
Length = 506
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 133/247 (53%), Gaps = 54/247 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 GTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQ 194
Query: 410 DFRKKLK 416
F K K
Sbjct: 195 QFMKSPK 201
>gi|193214029|ref|YP_001995228.1| DEAD/DEAH box helicase [Chloroherpeton thalassium ATCC 35110]
gi|193087506|gb|ACF12781.1| DEAD/DEAH box helicase domain protein [Chloroherpeton thalassium
ATCC 35110]
Length = 431
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 45/232 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L+P +++++ LG++ PT IQ A IP A GK DI+ A+TG+GKT AF LPI+
Sbjct: 6 FESISLNPSILRALKELGYETPTAIQAAAIPEAI-LGK-DILATAQTGTGKTAAFALPIL 63
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
RL E R + AP RALI+TPTRELALQ+ ++++ A+ + +R
Sbjct: 64 HRLGENRSY------------DIRAP----RALILTPTRELALQIDNNIRLYARYLRLRT 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I+GG+ Q ++L+ P+++V TPGRL +L G + L + FVLDEADRM++
Sbjct: 108 GVIMGGVPAHPQIKMLRRNPDILVATPGRLIDLFDQG---FIGLDQIQTFVLDEADRMLD 164
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
G +++ I SLQ + QTL+FSAT++
Sbjct: 165 MGFIDDIRRI------------------------ESLQPRDHQTLLFSATLS 192
>gi|452845761|gb|EME47694.1| hypothetical protein DOTSEDRAFT_77927 [Dothistroma septosporum
NZE10]
Length = 1056
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 151/302 (50%), Gaps = 67/302 (22%)
Query: 146 EESVTVSNGPDDAEEELVSEAEIST--------EFDAWNELRLHPLLMKSIYRLGFKEPT 197
EE V+ S DDA E + A + A++ + L ++K + +GF +PT
Sbjct: 496 EEPVSASEAGDDAAEREKANAFFADGESKKTGPTATAFHSMNLSRPILKGLASVGFDKPT 555
Query: 198 PIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEK 257
PIQ +P A +GK D++G A TGSGKT AF +PI++RLL
Sbjct: 556 PIQMKAVPVAL-EGK-DLVGGAVTGSGKTAAFLIPILERLL------------------- 594
Query: 258 YAPK--GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPE 315
Y PK R I+ PTRELALQ + K+++ ++ V VGG+S ++Q++ LK RP+
Sbjct: 595 YRPKRTSMTRVAILMPTRELALQCFNVAKKLSAFTDISVAMAVGGLSIKEQDKELKMRPD 654
Query: 316 LVVGTPGRLWELMSGGEKHL--VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 373
+V+ TPGR +L E++ +++ T+ VLDEADRM+E G EL I+ +P
Sbjct: 655 IVIATPGRFIDL----ERNYRSLDVGTIEILVLDEADRMLEEGFADELNEILSKIP---- 706
Query: 374 SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD------FRKKLKHGSLKLKQSVN 427
K RQT++FSAT+ D ++ ++ KQ+V+
Sbjct: 707 --------------------KSRQTMLFSATMTTKVDDLVRSGLQRPVRLMVDAQKQTVS 746
Query: 428 GL 429
GL
Sbjct: 747 GL 748
>gi|261408394|ref|YP_003244635.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|329929405|ref|ZP_08283153.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus sp. HGF5]
gi|261284857|gb|ACX66828.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. Y412MC10]
gi|328936492|gb|EGG32937.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus sp. HGF5]
Length = 533
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 140/251 (55%), Gaps = 54/251 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P ++++I LGF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 4 FADFGLEPRVLQAITELGFEEATPIQSQSIPIAL-TGK-DMIGQAQTGTGKTAAFGLPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ +E E+ + ALI+TPTRELA+QV + + ++++ +R
Sbjct: 62 HKIAKEEER--------------------IVALIMTPTRELAIQVAEEIGKLSRFKGIRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG +Q R LK +P++++GTPGRL + ++ + + L + VLDEAD M++
Sbjct: 102 LAIYGGQDIGRQIRALKRKPQIIIGTPGRLLDHIN---RKTIRLDDVQTVVLDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++QSI+ ++P ++RQTL+FSAT+ L++
Sbjct: 159 MGFMEDIQSILKLVP------------------------EERQTLLFSATMPANIQKLAS 194
Query: 410 DFRKKLKHGSL 420
F K+ +H S+
Sbjct: 195 QFLKEPEHVSV 205
>gi|56418761|ref|YP_146079.1| ATP-dependent RNA helicase [Geobacillus kaustophilus HTA426]
gi|81675946|sp|Q5L3G9.1|CSHA_GEOKA RecName: Full=DEAD-box ATP-dependent RNA helicase CshA
gi|56378603|dbj|BAD74511.1| ATP-dependent RNA helicase [Geobacillus kaustophilus HTA426]
Length = 467
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 127/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L +MK+I R+GF+E TPIQ IP + Q K D+IG A+TG+GKT AFG+PI+
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSL-QNK-DVIGQAQTGTGKTAAFGIPIV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ ++AL++ PTRELA+QV++ L ++ VRV
Sbjct: 62 EKV--------------------NVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG E+Q R LK P ++VGTPGR+ + ++ G L +HT+ VLDEAD M+
Sbjct: 102 LPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTV---VLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P +RQTL+FSAT+
Sbjct: 159 MGFIEDIEAILSHVP------------------------AERQTLLFSATM 185
>gi|384548306|ref|YP_005737559.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
ED133]
gi|298695355|gb|ADI98577.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
ED133]
Length = 487
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 121/215 (56%), Gaps = 49/215 (22%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 250
+GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 1 MGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI---------------- 42
Query: 251 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL 310
EK K +++LI+ PTRELA+QV + L+E ++G V+VV + GGM E+Q + L
Sbjct: 43 -----EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKAL 97
Query: 311 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
K P++VVGTPGR+ + ++ +HTL +LDEAD M+ G +++ I+D +P
Sbjct: 98 KKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNMGFIDDMRFIMDKIPA 154
Query: 371 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+RQT++FSAT+
Sbjct: 155 V-----------------------QRQTMLFSATM 166
>gi|433447995|ref|ZP_20411254.1| DEAD-box ATP-dependent RNA helicase CshA [Anoxybacillus
flavithermus TNO-09.006]
gi|431999627|gb|ELK20547.1| DEAD-box ATP-dependent RNA helicase CshA [Anoxybacillus
flavithermus TNO-09.006]
Length = 471
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 127/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E L P LMK++ ++GF+E TPIQ A IP + D+IG A+TG+GKT AFG+P++
Sbjct: 7 FKEFGLSPELMKAVSKMGFEEATPIQAATIPLSLQNR--DVIGQAQTGTGKTAAFGIPLI 64
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ + +A ++A+++ PTRELA+QV++ L ++ VRV
Sbjct: 65 EKI------------DMNNDA--------VQAIVVAPTRELAIQVSEELYKIGSTKRVRV 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG E+Q R LK P ++VGTPGR+ + + L +HT+ VLDEAD M+
Sbjct: 105 LPIYGGQDIERQIRALKKHPHIIVGTPGRVLDHIQRRTLRLQNVHTV---VLDEADEMLN 161
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P +RQTL+FSAT+
Sbjct: 162 MGFVEDIEAILSHVP------------------------TERQTLLFSATM 188
>gi|407452329|ref|YP_006724054.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-1]
gi|403313313|gb|AFR36154.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-1]
Length = 371
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 46/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L ++K+I G+ PT IQ+ IP +G+ D+IG A+TG+GKT AF +P++
Sbjct: 3 FTQLSLSSPILKAISDAGYTTPTAIQEKAIPTIL-EGR-DLIGCAQTGTGKTAAFSIPLL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q +L E K GK +RALI+TPTRELA+Q+ +++++ +K +N++
Sbjct: 61 Q-ILSETPKKGK----------------SIRALILTPTRELAIQIQENIEQYSKFLNIKH 103
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG+ KQER L ++++ TPGRL +LM G L+ L + VLDEADRM++
Sbjct: 104 LSIFGGVPQGKQERALNQGVDILIATPGRLLDLMQQG---LLSLSQIEILVLDEADRMLD 160
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+ +P KKRQTL FSAT+
Sbjct: 161 MGFVNDVKKILTKVP------------------------KKRQTLFFSATM 187
>gi|367052807|ref|XP_003656782.1| hypothetical protein THITE_2121904 [Thielavia terrestris NRRL 8126]
gi|347004047|gb|AEO70446.1| hypothetical protein THITE_2121904 [Thielavia terrestris NRRL 8126]
Length = 718
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 145/289 (50%), Gaps = 28/289 (9%)
Query: 118 QKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNE 177
Q + KNL +KK + K + + +E+ ++ I +W E
Sbjct: 236 QAAERKNLGKHWSEKKLEDMKERDWRIFKENFGIA----------TKGGAIPNPMRSWQE 285
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
L L++ ++ +G+ EPTPIQ+A IP A D+IG A TGSGKT AF LP++ +
Sbjct: 286 SNLPRRLLEIVHSVGYDEPTPIQRAAIPIALQ--ARDLIGVAVTGSGKTAAFLLPLLVYI 343
Query: 238 LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
E L E+ + P ALI+ PTREL Q+ ++ A + VV I
Sbjct: 344 SE--------LPPLTEDNKNDGPY----ALILAPTRELVQQIETEARKFADPLGFTVVSI 391
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGG S E+Q L+ E++V TPGRL + + E+ L+ + ++DEADRMI+ G
Sbjct: 392 VGGHSLEEQAFALRNGAEIIVATPGRLVDCL---ERRLLVFSQCCYIIMDEADRMIDQGF 448
Query: 358 FRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
L I+D LP+TN + + +E Q + + RQT++++AT+
Sbjct: 449 EEPLTKILDALPVTNEKPDTEDAENPQLMSRYLGGKDRYRQTMMYTATM 497
>gi|420186291|ref|ZP_14692362.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM040]
gi|394252508|gb|EJD97540.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM040]
Length = 509
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|417974638|ref|ZP_12615445.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 25644]
gi|346328982|gb|EGX97294.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 25644]
Length = 497
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 127/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NEL L L+K+I R GF+E TPIQ+A IP +D+IG A+TG+GKT AFGLPI+
Sbjct: 3 FNELGLEEDLLKAIKRSGFEEATPIQEATIPLVL--AGIDVIGQAQTGTGKTAAFGLPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q + + E H++A++++PTRELA+Q + L + K +V
Sbjct: 61 QHVDVKEE--------------------HIQAIVVSPTRELAIQTQEELYRLGKDKRAKV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q +LLK P+++VGTPGRL + ++ + V+L + VLDEAD M++
Sbjct: 101 QVVYGGADIRRQIKLLKHVPQILVGTPGRLLDHIN---RKTVDLSHVKTLVLDEADEMLD 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++II +P ++RQTL+FSAT+
Sbjct: 158 MGFLEDIEAIIKNVP------------------------EERQTLLFSATM 184
>gi|312077794|ref|XP_003141459.1| RNA helicase [Loa loa]
Length = 674
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 133/233 (57%), Gaps = 17/233 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E L + I ++G+KEPTPIQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 302 WDEAGLPSEVFDVIMKIGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFLIPLL 359
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ + + G + + P A+I+ PTRELA Q+ + + + + +R
Sbjct: 360 VWITS-------IPKFHGNDEQDTGPY----AIIMAPTRELAQQIEEETVKFGQLLGIRT 408
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG S E+Q L+ E+V+ TPGRL +++ E + L ++ +LDEADRM++
Sbjct: 409 VSVIGGASREEQGLKLRLGVEVVIATPGRLLDVL---ENRYLSLDQCTYVILDEADRMLD 465
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIA 406
G E+Q +++ +P+TN + + + + + + +KK RQT++F+AT++
Sbjct: 466 MGFEPEVQKVLEYIPVTNLKPDTEDAEKEESIMENFFSKKKYRQTVMFTATMS 518
>gi|163750030|ref|ZP_02157274.1| ATP-dependent RNA helicase, DEAD box family protein [Shewanella
benthica KT99]
gi|161330304|gb|EDQ01285.1| ATP-dependent RNA helicase, DEAD box family protein [Shewanella
benthica KT99]
Length = 436
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 132/251 (52%), Gaps = 43/251 (17%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA-AHQGKVDIIGAAET 221
+SE S ++ L L P L++ + LG+ +PTPIQ IPA A Q DI+ A+T
Sbjct: 1 MSEHADSAANHGFSSLSLRPELLQVLTALGYSQPTPIQTQAIPAILAGQ---DIMAGAQT 57
Query: 222 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-------LRALIITPTRE 274
GSGKT AF LPI+ +L E + L+EK ++ E AP +RAL++TPTRE
Sbjct: 58 GSGKTAAFSLPILHKLTEPLLR----LDEKNQQ-ESEAPSCSQVPAIRAIRALVLTPTRE 112
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LALQV + AK ++ + GG+S + Q ++L A +++V TPGRL + + G
Sbjct: 113 LALQVHGSFVKYAKLTQLKSALVYGGVSIDAQAQILAAGVDILVATPGRLLDHLRRGSMS 172
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 394
L EL F V DEADRM++ G E+ +I+ LP K
Sbjct: 173 LSELE---FLVFDEADRMLDMGFKDEIDAIVKQLP------------------------K 205
Query: 395 KRQTLVFSATI 405
RQTL+FSAT
Sbjct: 206 TRQTLLFSATF 216
>gi|241663607|ref|YP_002981967.1| DEAD/DEAH box helicase [Ralstonia pickettii 12D]
gi|240865634|gb|ACS63295.1| DEAD/DEAH box helicase domain protein [Ralstonia pickettii 12D]
Length = 493
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 135/259 (52%), Gaps = 49/259 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLA 228
S FD++ LHP +++++ G+ +PTPIQ A IP G+ D++GAA+TG+GKT
Sbjct: 12 SVTFDSFG---LHPDVLRALTESGYTKPTPIQAAAIPVVT-AGR-DVMGAAQTGTGKTAG 66
Query: 229 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVA 287
F LPI+ LL + + +P H +RALI+TPTRELA QV D++ + A
Sbjct: 67 FSLPIIHNLLPDANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYA 113
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K +R + GG+ Q L+ E++V TPGRL + + ++ V L + VLD
Sbjct: 114 KYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLD 170
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 171 EADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSP 206
Query: 408 SADFRKKLKHGSLKLKQSV 426
KKL L+ Q++
Sbjct: 207 EI---KKLAASYLRHPQTI 222
>gi|313205949|ref|YP_004045126.1| dead/deah box helicase domain-containing protein [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383485266|ref|YP_005394178.1| dead/deah box helicase domain protein [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|386322068|ref|YP_006018230.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-GD]
gi|416111966|ref|ZP_11592990.1| DEAD/DEAH box helicase domain protein [Riemerella anatipestifer
RA-YM]
gi|312445265|gb|ADQ81620.1| DEAD/DEAH box helicase domain protein [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|315022262|gb|EFT35290.1| DEAD/DEAH box helicase domain protein [Riemerella anatipestifer
RA-YM]
gi|325336611|gb|ADZ12885.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-GD]
gi|380459951|gb|AFD55635.1| dead/deah box helicase domain protein [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
Length = 371
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 46/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L ++K+I G+ PT IQ+ IP +G+ D+IG A+TG+GKT AF +P++
Sbjct: 3 FTQLSLSSPILKAISDAGYTTPTAIQEKAIPTIL-EGR-DLIGCAQTGTGKTAAFSIPLL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q +L E K GK +RALI+TPTRELA+Q+ +++++ +K +N++
Sbjct: 61 Q-ILSETPKKGK----------------SVRALILTPTRELAIQIQENIEQYSKFLNIKH 103
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG+ KQER L ++++ TPGRL +LM G L+ L + VLDEADRM++
Sbjct: 104 LSIFGGVPQGKQERALNQGVDILIATPGRLLDLMQQG---LLSLSQIEILVLDEADRMLD 160
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+ +P KKRQTL FSAT+
Sbjct: 161 MGFVNDVKKILTKVP------------------------KKRQTLFFSATM 187
>gi|332375408|gb|AEE62845.1| unknown [Dendroctonus ponderosae]
Length = 469
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 135/265 (50%), Gaps = 61/265 (23%)
Query: 141 KIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQ 200
++K EE+ PD EE V+ W++L L +L K+ +L +K P+ IQ
Sbjct: 20 EVKNTEET---EQTPDPIEEAPVT----------WSDLGLVDVLCKACEQLKWKTPSKIQ 66
Query: 201 KACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAP 260
+ IP A QGK DIIG AETGSGKT AF LPI+Q LLE P
Sbjct: 67 RESIPVAL-QGK-DIIGLAETGSGKTAAFALPILQALLEN-------------------P 105
Query: 261 KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGT 320
+ H ALI+TPTRELA Q+++ + + GI V+ + IVGG+ Q +L +P +++ T
Sbjct: 106 QRHF-ALILTPTRELAFQISEQFEALGSGIGVKSIVIVGGLDMTSQALMLAKKPHIIIAT 164
Query: 321 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE 380
PGRL + +S + L L F V+DEADR++ E+ I+ ++P
Sbjct: 165 PGRLVDHLSNTKGF--NLRALKFLVMDEADRILNMDFEAEVDKILKVIP----------- 211
Query: 381 QTQTCVTVSSLQRKKRQTLVFSATI 405
++R+T +FSAT+
Sbjct: 212 -------------RERRTFLFSATM 223
>gi|194758757|ref|XP_001961625.1| GF15062 [Drosophila ananassae]
gi|190615322|gb|EDV30846.1| GF15062 [Drosophila ananassae]
Length = 819
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 143/239 (59%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W+E ++ I ++G+KEPTPIQ+ IP DIIG AETGSGKTL
Sbjct: 386 IPNPIRSWSESGFPREIIDIIDKVGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTL 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 493 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 405
EADRMI+ G ++Q I++ +P++N + + + + + + +KK RQT++F+AT+
Sbjct: 550 EADRMIDMGFEPDVQKILEYMPVSNLKPDTEEAEDENKLMENFYTKKKYRQTVMFTATM 608
>gi|405972018|gb|EKC36815.1| Putative ATP-dependent RNA helicase DDX23 [Crassostrea gigas]
Length = 778
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 133/228 (58%), Gaps = 21/228 (9%)
Query: 183 LLMKSIYRL----GFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLL 238
LL K I + G+KEPTPIQ+ IP DIIG AETGSGKT AF P+++ +
Sbjct: 354 LLQKEILEVIEIAGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFLFPLLKWIT 411
Query: 239 EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIV 298
K+ ++ YA +I+ PTRELA Q+ + + AK +++R V I+
Sbjct: 412 S----LPKLERFDDQDQGPYA-------IILAPTRELAQQIEEETIKFAKHLDIRTVAII 460
Query: 299 GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 358
GG+S E+Q L+ E+V+ TPGRL +++ ++LV L ++ V+DEADRMI+ G
Sbjct: 461 GGISREEQGFKLRQGCEIVIATPGRLIDVLEN--RYLV-LAQCTYVVMDEADRMIDMGFE 517
Query: 359 RELQSIIDMLPMTNGS-NEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
++Q I++ LP++N + +E Q + S ++K RQT++F+AT+
Sbjct: 518 PDVQKILEYLPVSNQKPDNDDAEDDQKMLQNFSSKKKYRQTVMFTATM 565
>gi|221056985|ref|XP_002259630.1| snrnp protein [Plasmodium knowlesi strain H]
gi|193809702|emb|CAQ40404.1| snrnp protein, putative [Plasmodium knowlesi strain H]
Length = 1001
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 126/231 (54%), Gaps = 17/231 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L L+K+I + +++PTPIQ IP A D+IG AETGSGKT AF LP++
Sbjct: 578 WEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEMR--DLIGIAETGSGKTAAFVLPML 635
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K L E + P ALII P+RELA+Q+ D + A + R
Sbjct: 636 SYV--------KQLPPLTYETSQDGP----YALIIAPSRELAIQIFDETNKFASYCSCRT 683
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG + E+Q L+ E+++GTPGR+ + + EK L+ ++ +LDEADRM++
Sbjct: 684 VAVVGGRNAEEQAFELRKGVEIIIGTPGRIQDCL---EKAYTVLNQCNYVILDEADRMMD 740
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G + I+D +P +N +E ++ Q + + R R T +FSAT+
Sbjct: 741 MGFEDSVHFILDKIPTSNLKSEDEALALQEEMMAKAGHRLYRLTQMFSATM 791
>gi|251812202|ref|ZP_04826675.1| ATP-dependent RNA helicase [Staphylococcus epidermidis BCM-HMP0060]
gi|251804299|gb|EES56956.1| ATP-dependent RNA helicase [Staphylococcus epidermidis BCM-HMP0060]
Length = 528
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 23 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 80
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 81 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 119
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 120 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 176
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 177 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 204
>gi|159489242|ref|XP_001702606.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280628|gb|EDP06385.1| predicted protein [Chlamydomonas reinhardtii]
Length = 602
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 131/248 (52%), Gaps = 51/248 (20%)
Query: 162 LVSEAEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAA 219
SE T+F + + +L + L+K++ LG+K PTPIQ ACIP A G+ DI G+A
Sbjct: 136 FYSETPEGTKFSSASFADLNISRPLLKAVEALGYKSPTPIQAACIPLAL-AGR-DICGSA 193
Query: 220 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELAL 277
TGSGKT AF LP ++RLL + P+G L++TPTRELA+
Sbjct: 194 VTGSGKTAAFALPFLERLL-------------------HRPRGLAATYVLVLTPTRELAV 234
Query: 278 QVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 337
Q+ ++++A+ ++ V IVGG+S + Q L+ PE+VV TPGRL + + + V
Sbjct: 235 QIHSMIEKLAQFTDINVALIVGGLSLQVQAITLRQSPEVVVATPGRLIDHLRNSQS--VG 292
Query: 338 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 397
L L+ VLDEADR++E G E+ ++ P +KRQ
Sbjct: 293 LEDLAVLVLDEADRLLEMGFREEVAEVVRAAP------------------------RKRQ 328
Query: 398 TLVFSATI 405
T++FSAT
Sbjct: 329 TMLFSATF 336
>gi|336419231|ref|ZP_08599497.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium sp.
11_3_2]
gi|336163922|gb|EGN66836.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium sp.
11_3_2]
Length = 528
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLEHMQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFIEDIEKI---LTFTN 179
>gi|189208750|ref|XP_001940708.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976801|gb|EDU43427.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 805
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 119/239 (49%), Gaps = 49/239 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ + L +++ + +GF EPTPIQ +P A QGK D++G AETGSGKT AF +PI
Sbjct: 276 SFQAMSLSRPILRGLASVGFTEPTPIQNKAVPIAM-QGK-DVVGGAETGSGKTAAFLIPI 333
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGIN 291
++RLL Y PK R I PTRELA+Q + ++A +
Sbjct: 334 LERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTD 374
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ + GG ST QE +LK RP++V+ TPGR + M VE L VLDEADR
Sbjct: 375 ITFALMAGGFSTRDQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--HLEILVLDEADR 432
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
M+E G +L I+ +P K RQT++FSAT+ S D
Sbjct: 433 MLEEGFESQLNEILTTIP------------------------KSRQTMLFSATMTSSVD 467
>gi|409083507|gb|EKM83864.1| hypothetical protein AGABI1DRAFT_117335, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 701
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 123/227 (54%), Gaps = 43/227 (18%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
LMK++ LGF +PTPIQ + IP A GK D++G A TGSGKT AF +P+++RLL
Sbjct: 205 LMKAVTNLGFNKPTPIQASTIPVAL-LGK-DVVGNAVTGSGKTAAFMIPMIERLL----- 257
Query: 244 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMST 303
EKG++A +R L++ PTRELA+Q + +++ ++R+ +VGG+S
Sbjct: 258 ----FREKGKKA------AAIRCLVLVPTRELAVQCYEVGTKLSIHTDIRLCLVVGGLSL 307
Query: 304 EKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 363
+ QE L++RP++V+ TPGRL + + L L V+DEADR++ G EL
Sbjct: 308 KSQEADLRSRPDIVIATPGRLIDHIRNSAS--FSLDALDILVIDEADRILSEGFSDELTE 365
Query: 364 IIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
II P + RQT++FSAT+ S D
Sbjct: 366 IIKSCP------------------------RSRQTMLFSATMTDSVD 388
>gi|416128218|ref|ZP_11597223.1| DEAD/DEAH box helicase family protein [Staphylococcus epidermidis
FRI909]
gi|319399568|gb|EFV87823.1| DEAD/DEAH box helicase family protein [Staphylococcus epidermidis
FRI909]
Length = 509
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|212540616|ref|XP_002150463.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210067762|gb|EEA21854.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 808
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 148/269 (55%), Gaps = 21/269 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E L L+ I ++G+ +PTPIQ+A IP A D+IG A TGSGKT +F LP+
Sbjct: 369 SWEESGLPRRLLDLIKQVGYADPTPIQRAAIPIALQSR--DLIGVAVTGSGKTASFLLPL 426
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + E + +E E G A+I+ PTRELA Q+ K+ +K +N
Sbjct: 427 LVYIAEL---------PRLDEFEWRKNDGPY-AIILAPTRELAQQIEIEAKKFSKPLNFN 476
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI
Sbjct: 477 VVSIVGGHSLEEQAYSLRDGAEIIIATPGRLVDCL---ERRMLVLSQCCYVIMDEADRMI 533
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSATI--ALSA 409
+ G + I+D LP+TN + + + ++ V R+ RQT++++AT+ A+
Sbjct: 534 DLGFEEPVNKILDALPVTNEKPDTEEAEDAQAMSQHVGGRDRRYRQTMMYTATMPSAVER 593
Query: 410 DFRKKLKHGSLKLKQSVNGLNSIETLSER 438
RK L+ ++ +V +++T+ +R
Sbjct: 594 IARKYLRRPAIVTIGNVG--QAVDTVEQR 620
>gi|282876512|ref|ZP_06285378.1| putative ATP-dependent RNA helicase DeaD [Staphylococcus
epidermidis SK135]
gi|417656935|ref|ZP_12306613.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU028]
gi|417913851|ref|ZP_12557512.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU109]
gi|418413340|ref|ZP_12986582.1| hypothetical protein HMPREF9281_02186 [Staphylococcus epidermidis
BVS058A4]
gi|418604120|ref|ZP_13167487.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU041]
gi|418624602|ref|ZP_13187275.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU125]
gi|418663726|ref|ZP_13225235.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU081]
gi|419768504|ref|ZP_14294626.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-250]
gi|419771588|ref|ZP_14297639.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-K]
gi|420182053|ref|ZP_14688195.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM049]
gi|420202795|ref|ZP_14708383.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM018]
gi|420220941|ref|ZP_14725896.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH04008]
gi|420233548|ref|ZP_14738156.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH051668]
gi|421608789|ref|ZP_16050002.1| DEAD-box ATP dependent DNA helicase [Staphylococcus epidermidis
AU12-03]
gi|281294764|gb|EFA87292.1| putative ATP-dependent RNA helicase DeaD [Staphylococcus
epidermidis SK135]
gi|329735713|gb|EGG71996.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU028]
gi|341654309|gb|EGS78056.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU109]
gi|374405916|gb|EHQ76827.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU041]
gi|374411264|gb|EHQ81981.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU081]
gi|374827164|gb|EHR91030.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU125]
gi|383359868|gb|EID37278.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-250]
gi|383361086|gb|EID38468.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-K]
gi|394250517|gb|EJD95699.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM049]
gi|394268974|gb|EJE13519.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM018]
gi|394285391|gb|EJE29470.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH04008]
gi|394299830|gb|EJE43358.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH051668]
gi|406655530|gb|EKC81956.1| DEAD-box ATP dependent DNA helicase [Staphylococcus epidermidis
AU12-03]
gi|410879227|gb|EKS27078.1| hypothetical protein HMPREF9281_02186 [Staphylococcus epidermidis
BVS058A4]
Length = 509
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|57867605|ref|YP_189253.1| DEAD-box ATP dependent DNA helicase [Staphylococcus epidermidis
RP62A]
gi|293366046|ref|ZP_06612734.1| ATP-dependent RNA helicase DeaD [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417646901|ref|ZP_12296753.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU144]
gi|417660218|ref|ZP_12309807.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU045]
gi|417908989|ref|ZP_12552739.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU037]
gi|417912456|ref|ZP_12556148.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU105]
gi|418613191|ref|ZP_13176207.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU117]
gi|418617909|ref|ZP_13180795.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU120]
gi|418622358|ref|ZP_13185110.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU123]
gi|418627678|ref|ZP_13190250.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU126]
gi|418629929|ref|ZP_13192422.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU127]
gi|420164449|ref|ZP_14671178.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM095]
gi|420166528|ref|ZP_14673212.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM088]
gi|420169264|ref|ZP_14675867.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM087]
gi|420171687|ref|ZP_14678222.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM070]
gi|420173608|ref|ZP_14680099.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM067]
gi|420186914|ref|ZP_14692938.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM039]
gi|420195899|ref|ZP_14701683.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM021]
gi|420207903|ref|ZP_14713388.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM008]
gi|420210262|ref|ZP_14715691.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM003]
gi|420212518|ref|ZP_14717867.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM001]
gi|420215194|ref|ZP_14720465.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH05005]
gi|420216699|ref|ZP_14721897.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH05001]
gi|420223686|ref|ZP_14728581.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH08001]
gi|420226143|ref|ZP_14730965.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH06004]
gi|420230941|ref|ZP_14735618.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH04003]
gi|420235977|ref|ZP_14740508.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH051475]
gi|81673916|sp|Q5HME0.1|Y1688_STAEQ RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SERP1688
gi|57638263|gb|AAW55051.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
epidermidis RP62A]
gi|291319769|gb|EFE60127.1| ATP-dependent RNA helicase DeaD [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329726161|gb|EGG62633.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU144]
gi|329734135|gb|EGG70453.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU045]
gi|341650668|gb|EGS74484.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU105]
gi|341654629|gb|EGS78368.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU037]
gi|374816627|gb|EHR80828.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU117]
gi|374817170|gb|EHR81356.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU120]
gi|374826952|gb|EHR90827.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU123]
gi|374829124|gb|EHR92938.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU126]
gi|374832448|gb|EHR96158.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU127]
gi|394231554|gb|EJD77180.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM095]
gi|394231727|gb|EJD77351.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM087]
gi|394233535|gb|EJD79136.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM088]
gi|394236802|gb|EJD82305.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM070]
gi|394239645|gb|EJD85080.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM067]
gi|394256880|gb|EJE01804.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM039]
gi|394262500|gb|EJE07262.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM021]
gi|394274923|gb|EJE19318.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM008]
gi|394276496|gb|EJE20834.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM003]
gi|394279639|gb|EJE23942.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM001]
gi|394282474|gb|EJE26667.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH05005]
gi|394287184|gb|EJE31151.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH08001]
gi|394291378|gb|EJE35190.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH05001]
gi|394292629|gb|EJE36369.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH06004]
gi|394295824|gb|EJE39460.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH04003]
gi|394301613|gb|EJE45068.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH051475]
Length = 509
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|420198021|ref|ZP_14703739.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM020]
gi|420228554|ref|ZP_14733304.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH05003]
gi|394264952|gb|EJE09618.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM020]
gi|394294660|gb|EJE38328.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH05003]
Length = 509
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|418609346|ref|ZP_13172499.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU065]
gi|374407748|gb|EHQ78596.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU065]
Length = 509
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|418915213|ref|ZP_13469180.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC340D]
gi|377754656|gb|EHT78563.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC340D]
Length = 506
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 133/247 (53%), Gaps = 54/247 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++S+ +GFKEPTPIQK IP A QG +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QG-IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK K +++LI+ PTRELA+QV + L+E ++ V+V
Sbjct: 62 ---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSREQGVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 158 MGFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQ 194
Query: 410 DFRKKLK 416
F K K
Sbjct: 195 QFMKSPK 201
>gi|393905846|gb|EJD74089.1| DEAD box ATP-dependent RNA helicase [Loa loa]
Length = 757
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 133/233 (57%), Gaps = 17/233 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E L + I ++G+KEPTPIQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 329 WDEAGLPSEVFDVIMKIGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFLIPLL 386
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ + + G + + P A+I+ PTRELA Q+ + + + + +R
Sbjct: 387 VWIT-------SIPKFHGNDEQDTGP----YAIIMAPTRELAQQIEEETVKFGQLLGIRT 435
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG S E+Q L+ E+V+ TPGRL +++ E + L ++ +LDEADRM++
Sbjct: 436 VSVIGGASREEQGLKLRLGVEVVIATPGRLLDVL---ENRYLSLDQCTYVILDEADRMLD 492
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIA 406
G E+Q +++ +P+TN + + + + + + +KK RQT++F+AT++
Sbjct: 493 MGFEPEVQKVLEYIPVTNLKPDTEDAEKEESIMENFFSKKKYRQTVMFTATMS 545
>gi|418326967|ref|ZP_12938142.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU071]
gi|365224073|gb|EHM65343.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU071]
Length = 509
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|330915742|ref|XP_003297149.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
gi|311330325|gb|EFQ94748.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
Length = 805
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 119/239 (49%), Gaps = 49/239 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ + L +++ + +GF EPTPIQ +P A QGK D++G AETGSGKT AF +PI
Sbjct: 276 SFQAMSLSRPILRGLASVGFTEPTPIQNKAVPIAM-QGK-DVVGGAETGSGKTAAFLIPI 333
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGIN 291
++RLL Y PK R I PTRELA+Q + ++A +
Sbjct: 334 LERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTD 374
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ + GG ST QE +LK RP++V+ TPGR + M VE L VLDEADR
Sbjct: 375 ITFALMAGGFSTRDQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--HLEILVLDEADR 432
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
M+E G +L I+ +P K RQT++FSAT+ S D
Sbjct: 433 MLEEGFESQLNEILTTIP------------------------KSRQTMLFSATMTSSVD 467
>gi|289766283|ref|ZP_06525661.1| ATP-dependent RNA helicase [Fusobacterium sp. D11]
gi|289717838|gb|EFD81850.1| ATP-dependent RNA helicase [Fusobacterium sp. D11]
Length = 528
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFIEDIEKI---LTFTN 179
>gi|255079330|ref|XP_002503245.1| predicted protein [Micromonas sp. RCC299]
gi|226518511|gb|ACO64503.1| predicted protein [Micromonas sp. RCC299]
Length = 605
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 123/241 (51%), Gaps = 46/241 (19%)
Query: 167 EISTEFDAWN--ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSG 224
E T F A N EL L L+K+ LG+ PTPIQ A +P A G+ DI G A TGSG
Sbjct: 142 EKDTTFSAANFTELNLSRPLVKACGALGYASPTPIQAAVVPLAL-TGR-DICGRAVTGSG 199
Query: 225 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 284
KT AF LP ++R+L K P L++ PTRELA+QV +
Sbjct: 200 KTAAFMLPCLERMLHRGPK----------------PVAATHVLVLVPTRELAVQVHQMTE 243
Query: 285 EVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
+A+ +VR +VGG+S Q L++RPE+VV TPGRL + + H V L L+
Sbjct: 244 RLAQFTSVRAALVVGGLSANVQATSLRSRPEVVVATPGRLIDHVRN--THSVGLEDLATL 301
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
VLDEADR++E G E++ I+ P K+RQT++FSAT
Sbjct: 302 VLDEADRLLEMGFLEEIREIVRHCP------------------------KRRQTMLFSAT 337
Query: 405 I 405
+
Sbjct: 338 L 338
>gi|420178510|ref|ZP_14684840.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM057]
gi|420181304|ref|ZP_14687507.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM053]
gi|420200772|ref|ZP_14706412.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM031]
gi|394246233|gb|EJD91494.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM057]
gi|394246652|gb|EJD91906.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM053]
gi|394267516|gb|EJE12103.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM031]
Length = 509
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|336274640|ref|XP_003352074.1| hypothetical protein SMAC_00622 [Sordaria macrospora k-hell]
gi|380096359|emb|CCC06407.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 730
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 143/289 (49%), Gaps = 28/289 (9%)
Query: 118 QKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNE 177
+ EQ KNL +KK + K + + +E+ ++ I +W+E
Sbjct: 250 ETEQRKNLGKHWSEKKLEDMKERDWRIFKENFGIA----------TKGGAIPNPMRSWDE 299
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL 237
L L+ + +G+ EPTPIQ+A IP A D+IG A TGSGKT AF LP++ +
Sbjct: 300 STLPRRLLDIVKNVGYDEPTPIQRAAIPIALQAR--DLIGVAVTGSGKTAAFLLPLLVYI 357
Query: 238 LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 297
E L E + P ALI+ PTREL Q+ K+ A + VV I
Sbjct: 358 SE--------LPPLTEYNKNDGPY----ALILAPTRELVQQIESEAKKFATPLGFTVVSI 405
Query: 298 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 357
VGG S E+Q L+ E++V TPGRL + + E+ L+ + ++DEADRMI+ G
Sbjct: 406 VGGHSLEEQAYALRNGAEIIVATPGRLVDCL---ERRLLVFSQCCYTIMDEADRMIDQGF 462
Query: 358 FRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
L I+D +P+TN + +E Q + + RQT++++AT+
Sbjct: 463 EEPLTKILDAMPVTNEKPDTDDAENPQLMSRYVDGKDRYRQTMMYTATM 511
>gi|418633569|ref|ZP_13195977.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU129]
gi|420190985|ref|ZP_14696922.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM037]
gi|420204908|ref|ZP_14710446.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM015]
gi|374838907|gb|EHS02440.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU129]
gi|394258083|gb|EJE02975.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM037]
gi|394271629|gb|EJE16118.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM015]
Length = 509
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLETMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|355683257|gb|AER97065.1| DEAD box polypeptide 23 [Mustela putorius furo]
Length = 818
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 442
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 443 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 491
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 492 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 548
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 549 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 607
Query: 405 I 405
+
Sbjct: 608 M 608
>gi|149245944|ref|XP_001527442.1| hypothetical protein LELG_02271 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013518|sp|A5DY34.1|DRS1_LODEL RecName: Full=ATP-dependent RNA helicase DRS1
gi|146449836|gb|EDK44092.1| hypothetical protein LELG_02271 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 686
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 130/232 (56%), Gaps = 46/232 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL+L ++KS+ +LGF PTP+Q + IP A GK DI+ +A+TGSGKT A+ +PI+
Sbjct: 198 FQELQLSRPILKSLQQLGFTVPTPVQASTIPIALL-GK-DIVASAQTGSGKTAAYLIPII 255
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-NVR 293
+RLL + +A+I+TPTRELA+QV D +++ + + N+
Sbjct: 256 ERLLYVKNSTST------------------KAIILTPTRELAIQVHDVGRKLGQFVSNLN 297
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VGG+S ++QE+ LK RP++V+ TPGRL + + VE + ++DEADRM+
Sbjct: 298 FGMAVGGLSLKQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSVE--DVQVLIIDEADRML 355
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
E G EL I+ ++P ++KRQTL+FSAT+
Sbjct: 356 EEGFQEELTEILSLIP-----------------------KQKRQTLLFSATM 384
>gi|256088378|ref|XP_002580316.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353230182|emb|CCD76353.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 730
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 139/239 (58%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W E+ + L I ++G+ EPTPIQ+ IP DIIG AETGSGKT
Sbjct: 295 IPNPLRSWAEMNVADELKDVIKKVGYPEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 352
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + ++ K+ E+ E+ E+ P A+I+ PTRELA Q+ + +
Sbjct: 353 AFLIPLLNWI----QRLPKL--ERLEDTEQ-GPY----AIIMAPTRELAQQIEEETVKFG 401
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + ++ V ++GG+S E Q L+ E+V+GTPGRL +++ E + L+ ++ VLD
Sbjct: 402 RPLGIKTVSLIGGLSREDQALKLRMGAEIVIGTPGRLNDVL---ENRYMVLNQCTYIVLD 458
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
EAD+MI+ G E+ +I+ LP+TN + + +E ++ + + K RQT++F+AT+
Sbjct: 459 EADKMIDMGFEPEVNNILTYLPVTNEKPDNEDAEDDSKLLSNFATKHKYRQTVMFTATM 517
>gi|423133418|ref|ZP_17121065.1| hypothetical protein HMPREF9715_00840 [Myroides odoratimimus CIP
101113]
gi|423329024|ref|ZP_17306831.1| hypothetical protein HMPREF9711_02405 [Myroides odoratimimus CCUG
3837]
gi|371648682|gb|EHO14169.1| hypothetical protein HMPREF9715_00840 [Myroides odoratimimus CIP
101113]
gi|404603424|gb|EKB03078.1| hypothetical protein HMPREF9711_02405 [Myroides odoratimimus CCUG
3837]
Length = 415
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 132/233 (56%), Gaps = 44/233 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L+ ++++I LG+KEPTPIQ+ IP + D+IG A+TG+GKT AF +PI+
Sbjct: 3 FEDLQLNKNILRAIDELGYKEPTPIQQKAIPFILAEK--DLIGCAQTGTGKTAAFAMPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
L K G +K ++A + LI+TPTRELA+Q+ D+ ++ AK NV
Sbjct: 61 HYL----HKLGNT--KKAKKA---------KVLIVTPTRELAVQIGDNFEKYAKYTNVTY 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GGMS + Q L ++++GTPGRL +L +KHL +L L F VLDEAD M++
Sbjct: 106 ITLYGGMSIKPQIEQLNKGADVIIGTPGRLLDLYK--QKHL-DLDHLHFLVLDEADLMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
G +++ +I + P SN RQTL+FSAT+ L
Sbjct: 163 MGFIDDVKKLIQLTP----SN--------------------RQTLLFSATMPL 191
>gi|373108568|ref|ZP_09522850.1| hypothetical protein HMPREF9712_00443 [Myroides odoratimimus CCUG
10230]
gi|423129762|ref|ZP_17117437.1| hypothetical protein HMPREF9714_00837 [Myroides odoratimimus CCUG
12901]
gi|371646685|gb|EHO12196.1| hypothetical protein HMPREF9712_00443 [Myroides odoratimimus CCUG
10230]
gi|371647785|gb|EHO13280.1| hypothetical protein HMPREF9714_00837 [Myroides odoratimimus CCUG
12901]
Length = 415
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 132/233 (56%), Gaps = 44/233 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L+ ++++I LG+KEPTPIQ+ IP + D+IG A+TG+GKT AF +PI+
Sbjct: 3 FEDLQLNKNILRAIDELGYKEPTPIQQKAIPFILAEK--DLIGCAQTGTGKTAAFAMPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
L K G +K ++A + LI+TPTRELA+Q+ D+ ++ AK NV
Sbjct: 61 HYL----HKLGNT--KKAKKA---------KVLIVTPTRELAVQIGDNFEKYAKYTNVTY 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GGMS + Q L ++++GTPGRL +L +KHL +L L F VLDEAD M++
Sbjct: 106 ITLYGGMSIKPQIEQLNKGADVIIGTPGRLLDLYK--QKHL-DLDHLHFLVLDEADLMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
G +++ +I + P SN RQTL+FSAT+ L
Sbjct: 163 MGFIDDVKKLIQLTP----SN--------------------RQTLLFSATMPL 191
>gi|253573302|ref|ZP_04850645.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251846830|gb|EES74835.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 518
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 141/258 (54%), Gaps = 54/258 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+ + + L P ++++I LGF+E TPIQ IP A G+ D+IG A+TG+GKT AFGL
Sbjct: 1 MNTFADFGLEPKVLQAITELGFEEATPIQAKSIPIAL-SGR-DLIGQAQTGTGKTAAFGL 58
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P++ ++ +E ++ + AL++TPTRELA+QV + + ++++
Sbjct: 59 PLINKIPKEEDR--------------------IVALVMTPTRELAIQVAEEIGKLSRFKG 98
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
R +PI GG +Q R LK +P++++GTPGRL + ++ + ++L + VLDEAD
Sbjct: 99 TRSLPIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLDDVKTVVLDEADE 155
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA----- 406
M++ G ++QSI+ ++P + RQT++FSAT+
Sbjct: 156 MLDMGFMDDIQSILKLVP------------------------EDRQTMLFSATMPANIQK 191
Query: 407 LSADFRKKLKHGSLKLKQ 424
L+ F K +H S+ KQ
Sbjct: 192 LAQQFLKNPEHVSVIPKQ 209
>gi|402814785|ref|ZP_10864378.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus alvei DSM
29]
gi|402507156|gb|EJW17678.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus alvei DSM
29]
Length = 526
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 139/255 (54%), Gaps = 54/255 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E L P ++++I LGF+E TPIQ+ IP A G+ D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFGLEPKVLQAITELGFEESTPIQEKAIPVAM-TGR-DLIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ E+ ++ALI+TPTRELA+QV D + ++ + VR
Sbjct: 62 SKIDPTEER--------------------VKALIMTPTRELAIQVADEIGKLTRFKGVRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK P++++GTPGRL + ++ + + L ++ VLDEAD M++
Sbjct: 102 LPIYGGQDIGRQIRALKKHPQIIIGTPGRLLDHIN---RKTIRLDDVATVVLDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++ SI+ ++P ++RQT++FSAT+ L+
Sbjct: 159 MGFMEDITSILSLVP------------------------EQRQTMLFSATMPPNIQKLAN 194
Query: 410 DFRKKLKHGSLKLKQ 424
F ++ +H S+ K
Sbjct: 195 QFLREPEHVSVMPKH 209
>gi|354580517|ref|ZP_08999422.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
gi|353202948|gb|EHB68397.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
Length = 529
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 138/251 (54%), Gaps = 54/251 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P ++++I LGF+E TPIQ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 4 FADFGLEPRVLQAITELGFEEATPIQSQSIPIAL-TGK-DMIGQAQTGTGKTAAFGLPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ +E E+ + AL++TPTRELA+QV + + ++++ +R
Sbjct: 62 HKIAKEEER--------------------IVALVMTPTRELAIQVAEEIGKLSRFKGIRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG +Q R LK +P++++GTPGRL + ++ + + L + VLDEAD M++
Sbjct: 102 LAIYGGQDIGRQIRALKKKPQIIIGTPGRLLDHIN---RKTIRLDDVQTVVLDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++QSI+ ++P + RQTL+FSAT+ L++
Sbjct: 159 MGFMDDIQSILKLVP------------------------ENRQTLLFSATMPPNIQKLAS 194
Query: 410 DFRKKLKHGSL 420
F K +H S+
Sbjct: 195 QFLKDPEHVSV 205
>gi|407475055|ref|YP_006789455.1| DEAD/DEAH box helicase [Clostridium acidurici 9a]
gi|407051563|gb|AFS79608.1| DEAD-box ATP-dependent RNA helicase CshA [Clostridium acidurici 9a]
Length = 526
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 127/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L+ ++K+I LGF+EP+ IQK IP D+IG A+TG+GKTLAFG P++
Sbjct: 6 FKDLGLNEDILKAINELGFEEPSKIQKEAIPVVLE--GFDVIGQAQTGTGKTLAFGAPVI 63
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ ++ GK + +++ITPTRELA+QV D + + K VR
Sbjct: 64 NKI---KKSTGK-----------------ISSIVITPTRELAIQVNDEISRIGKYTRVRT 103
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG ++Q R +K +++VGTPGR+ +L+ + +V+L ++F VLDEAD M++
Sbjct: 104 LPVYGGKPIDRQIRAIKQGVDVLVGTPGRVLDLI---RRRVVDLSRVNFLVLDEADEMLD 160
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II P + RQT++FSAT+
Sbjct: 161 MGFIDDIEEIIRNCP------------------------EDRQTMLFSATM 187
>gi|142982528|sp|A2QAX7.1|DRS1_ASPNC RecName: Full=ATP-dependent RNA helicase drs1
gi|134055839|emb|CAK37361.1| unnamed protein product [Aspergillus niger]
Length = 824
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 129/254 (50%), Gaps = 49/254 (19%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGA 218
EEE SE+ ++ ++ E L +++ + + F PTPIQ+ IP A GK DI+G+
Sbjct: 295 EEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALL-GK-DIVGS 352
Query: 219 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELA 276
A TGSGKT AF +PI++RLL + P+ R I+ PTRELA
Sbjct: 353 AVTGSGKTAAFVVPILERLL-------------------FRPRKVPTSRVAILMPTRELA 393
Query: 277 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 336
+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M V
Sbjct: 394 VQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTV 453
Query: 337 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 396
+ TL VLDEADRM+E+G EL I+ +P K R
Sbjct: 454 D--TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSR 487
Query: 397 QTLVFSATIALSAD 410
QT++FSAT+ + D
Sbjct: 488 QTMLFSATMTDTVD 501
>gi|41054055|ref|NP_956176.1| probable ATP-dependent RNA helicase DDX23 [Danio rerio]
gi|38014376|gb|AAH60524.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Danio rerio]
Length = 807
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 131/233 (56%), Gaps = 18/233 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L P +++ I + G+K+PTPIQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 380 WKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFLIPLL 437
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K ++ E P A+I+ PTRELA Q+ + + K + +R
Sbjct: 438 V-WITTLPKIDRI------EDSDQGPY----AIILAPTRELAQQIEEETIKFGKPLGIRT 486
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 487 VAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDEADRMID 543
Query: 355 NGHFRELQSIIDMLPMTNG--SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++Q I++ +P+TN + + + S + K RQT++F+AT+
Sbjct: 544 MGFEPDVQKILEYIPVTNQKPDTDDAEDPEKMMQNFESGKHKYRQTVMFTATM 596
>gi|403296528|ref|XP_003939155.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Saimiri
boliviensis boliviensis]
Length = 820
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|351697633|gb|EHB00552.1| Putative ATP-dependent RNA helicase DDX23 [Heterocephalus glaber]
Length = 819
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 442
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 443 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 491
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 492 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 548
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 549 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 607
Query: 405 I 405
+
Sbjct: 608 M 608
>gi|170083961|ref|XP_001873204.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650756|gb|EDR14996.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 355
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 124/227 (54%), Gaps = 43/227 (18%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
L+KSI LGF +PTPIQ A IP A GK D++G A TGSGKT AF +P+++RLL
Sbjct: 7 LLKSIASLGFNKPTPIQAAAIPVAL-LGK-DVVGNAMTGSGKTAAFIIPMVERLLYR--- 61
Query: 244 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMST 303
EKG++A R L++ PTRELA+Q D +++ ++++ +VGG+S
Sbjct: 62 ------EKGKKAAAT------RCLVLVPTRELAVQCFDVGVKLSTHTDIQLCLLVGGLSL 109
Query: 304 EKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 363
+ QE L+ARP++V+ TPGRL + + L + VLDEADRM+ +G EL
Sbjct: 110 KSQEVALRARPDIVIATPGRLIDHIRNSPAF--TLDAIDILVLDEADRMLSDGFADELAE 167
Query: 364 IIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
II P++ RQT++FSAT+ S D
Sbjct: 168 IIKSCPVS------------------------RQTMLFSATMTDSVD 190
>gi|115454875|ref|NP_001051038.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|75320262|sp|Q53RK8.1|RH21_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 21
gi|62733557|gb|AAX95674.1| DEAD/DEAH box helicase, putative [Oryza sativa Japonica Group]
gi|108710689|gb|ABF98484.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|108710690|gb|ABF98485.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|108710691|gb|ABF98486.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113549509|dbj|BAF12952.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|125545447|gb|EAY91586.1| hypothetical protein OsI_13221 [Oryza sativa Indica Group]
gi|125587655|gb|EAZ28319.1| hypothetical protein OsJ_12293 [Oryza sativa Japonica Group]
gi|215697317|dbj|BAG91311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 736
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 24/231 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E +L L++++ + G+KEP+PIQ A IP Q D+IG AETGSGKT AF LP++
Sbjct: 317 WSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQR--DVIGIAETGSGKTAAFVLPML 374
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ L EE E P A+++ PTRELA Q+ + + A + ++V
Sbjct: 375 SYITR--------LPPISEENEAEGPY----AVVMAPTRELAQQIEEETVKFATYLGIKV 422
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VLDEADRMI+
Sbjct: 423 VSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCL---ERRYAVLNQCNYVVLDEADRMID 479
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++ ++D +P +N E + E+ R T +FSAT+
Sbjct: 480 MGFEPQVVGVLDAMPSSNLKPENEDEELDAKTIY-------RTTYMFSATM 523
>gi|317025749|ref|XP_001389716.2| ATP-dependent RNA helicase drs1 [Aspergillus niger CBS 513.88]
Length = 827
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 129/254 (50%), Gaps = 49/254 (19%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGA 218
EEE SE+ ++ ++ E L +++ + + F PTPIQ+ IP A GK DI+G+
Sbjct: 295 EEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALL-GK-DIVGS 352
Query: 219 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELA 276
A TGSGKT AF +PI++RLL + P+ R I+ PTRELA
Sbjct: 353 AVTGSGKTAAFVVPILERLL-------------------FRPRKVPTSRVAILMPTRELA 393
Query: 277 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 336
+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M V
Sbjct: 394 VQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTV 453
Query: 337 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 396
+ TL VLDEADRM+E+G EL I+ +P K R
Sbjct: 454 D--TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSR 487
Query: 397 QTLVFSATIALSAD 410
QT++FSAT+ + D
Sbjct: 488 QTMLFSATMTDTVD 501
>gi|309781736|ref|ZP_07676469.1| ATP-dependent RNA helicase [Ralstonia sp. 5_7_47FAA]
gi|308919377|gb|EFP65041.1| ATP-dependent RNA helicase [Ralstonia sp. 5_7_47FAA]
Length = 498
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 135/261 (51%), Gaps = 53/261 (20%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA--AAHQGKVDIIGAAETGSGKT 226
S FD++ LHP +++++ G+ +PTPIQ A IP A H D++GAA+TG+GKT
Sbjct: 17 SVTFDSFG---LHPDVLRALTESGYTKPTPIQAAAIPVVTAGH----DVMGAAQTGTGKT 69
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKE 285
F LPI+ LL + + +P H +RALI+TPTRELA QV D++ +
Sbjct: 70 AGFSLPIIHNLLPDANTSA-------------SPARHPVRALILTPTRELADQVYDNVAK 116
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
AK +R + GG+ Q L+ E++V TPGRL + + ++ V L + V
Sbjct: 117 YAKYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLV 173
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
LDEADRM++ G +LQ II++LP RQTL+FSAT
Sbjct: 174 LDEADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATF 209
Query: 406 ALSADFRKKLKHGSLKLKQSV 426
+ K+L L+ Q++
Sbjct: 210 SPEI---KRLAASYLRHPQTI 227
>gi|301122021|ref|XP_002908737.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262099499|gb|EEY57551.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 518
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 133/283 (46%), Gaps = 53/283 (18%)
Query: 133 KKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTE-----FDAWNELRLHPLLMKS 187
K+++ K+ E + VS+ D + E + ++ E ++ L + P L+K
Sbjct: 7 KRRRAPAPKLLNEESTPAVSSDSDSSIETIAKSDKVQVENASNILISFLNLGVDPWLVKR 66
Query: 188 IYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKM 247
LG + PTP+Q CIP G+ D+IG A+TGSGKT AF LPI+ L
Sbjct: 67 CELLGIRHPTPVQAHCIPPIL-AGR-DVIGCAQTGSGKTAAFALPILHTL---------- 114
Query: 248 LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQE 307
+ Y P AL++TPTRELA Q+ D + VR IVGG+ KQ
Sbjct: 115 ------SKDPYGP----YALVLTPTRELAFQIADQFNAFGSSMAVRCAVIVGGVDMLKQS 164
Query: 308 RLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
L+ RP ++V TPGR + + + + L + + VLDEADR+++ ++L I D
Sbjct: 165 LTLQQRPHIIVATPGRFRDHLLRADPPNISL--VKYVVLDEADRLLDVSFAKDLSFIFDK 222
Query: 368 LPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
LP KRQTL+FSAT+ + D
Sbjct: 223 LP------------------------TKRQTLLFSATMTANLD 241
>gi|238878470|gb|EEQ42108.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 581
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 130/233 (55%), Gaps = 24/233 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
WNE ++ L+ I +LG++EPT +Q+A IP A K D++G AETGSGKTLAF +P++
Sbjct: 170 WNEGSINDKLVSIISQLGYEEPTSVQRASIPLALK--KRDVVGVAETGSGKTLAFLIPVL 227
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+L E K + E P G LI+ PTRELALQ+T ++ K + +V
Sbjct: 228 NYILSIDENYLKYEKISNE------PVG----LILAPTRELALQITKEAEKFCKKLGYQV 277
Query: 295 VPIVGGMSTEKQ-ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+PI+GG + ++ + L+V TPGR L+ E+ +V+L V+DEADRMI
Sbjct: 278 LPIIGGHHYQDTINKIDQTGVHLIVATPGR---LVDSIERKIVDLSKCYCLVMDEADRMI 334
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G ++L ++D LP +Q + + +KR T++F+ATI+
Sbjct: 335 DMGFEKDLNKVLDKLPT--------EKQLSSTIDGRIFHLEKRSTMMFTATIS 379
>gi|395841632|ref|XP_003793638.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Otolemur
garnettii]
Length = 820
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|296211536|ref|XP_002752462.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Callithrix
jacchus]
Length = 820
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|386780941|ref|NP_001247801.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|380785261|gb|AFE64506.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|383409609|gb|AFH28018.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|384941744|gb|AFI34477.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
Length = 820
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|431901383|gb|ELK08409.1| Putative ATP-dependent RNA helicase DDX23 [Pteropus alecto]
Length = 820
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|341902886|gb|EGT58821.1| hypothetical protein CAEBREN_15104 [Caenorhabditis brenneri]
Length = 554
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 125/244 (51%), Gaps = 49/244 (20%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
+SE ++T+ + +L + + + + + K TP+Q ACIP DI+G A TG
Sbjct: 74 ISEENMTTK--KFQQLGVASWITQQLQTMHIKTATPVQAACIPKILDGS--DILGCARTG 129
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 282
+GKTLAF +PI+Q+L P G + ALI+TPTRELA Q+ D
Sbjct: 130 TGKTLAFAIPILQKL-------------------SVDPYG-IFALILTPTRELAFQIADQ 169
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH-TL 341
V K I ++ IVGG S +Q R L RP +VV TPGRL +L+ + + ++ +
Sbjct: 170 FVAVGKPITLKCSVIVGGRSLIQQARELSERPHIVVATPGRLADLIESDQDVIAKVFKKI 229
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 401
FFVLDEADRM+E + +L+ I + +P +KRQTL+
Sbjct: 230 QFFVLDEADRMLEGQYNDQLKPIFESIP------------------------QKRQTLLL 265
Query: 402 SATI 405
SATI
Sbjct: 266 SATI 269
>gi|237743040|ref|ZP_04573521.1| ATP-dependent RNA helicase [Fusobacterium sp. 7_1]
gi|229433600|gb|EEO43812.1| ATP-dependent RNA helicase [Fusobacterium sp. 7_1]
Length = 528
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFIEDIEKI---LTFTN 179
>gi|418327507|ref|ZP_12938660.1| DEAD/DEAH box helicase [Staphylococcus epidermidis 14.1.R1.SE]
gi|418614642|ref|ZP_13177605.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU118]
gi|418632462|ref|ZP_13194893.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU128]
gi|365232865|gb|EHM73840.1| DEAD/DEAH box helicase [Staphylococcus epidermidis 14.1.R1.SE]
gi|374819532|gb|EHR83654.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU118]
gi|374832369|gb|EHR96084.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU128]
Length = 509
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|354497364|ref|XP_003510790.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Cricetulus griseus]
gi|344254301|gb|EGW10405.1| putative ATP-dependent RNA helicase DDX23 [Cricetulus griseus]
Length = 819
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 442
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 443 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 491
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 492 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 548
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 549 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 607
Query: 405 I 405
+
Sbjct: 608 M 608
>gi|259047319|ref|ZP_05737720.1| cold-shock DEAD box protein A [Granulicatella adiacens ATCC 49175]
gi|259036015|gb|EEW37270.1| cold-shock DEAD box protein A [Granulicatella adiacens ATCC 49175]
Length = 520
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 133/252 (52%), Gaps = 54/252 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NEL L L++SI ++GF+E TPIQ IP A QG +D+IG A+TG+GKT AFGLP++
Sbjct: 14 FNELGLDSALLESIEKMGFEEATPIQAQTIPKAL-QG-LDVIGQAQTGTGKTAAFGLPML 71
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q++ + K G ++ L+I PTRELA+Q + L + + +RV
Sbjct: 72 QKI--DPSKKG------------------VQGLVIAPTRELAIQTQEELFRLGRDKKIRV 111
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG +Q R LK P++VVGTPGRL + +S + ++L + VLDEAD M+
Sbjct: 112 QAVYGGADINRQIRQLKENPQIVVGTPGRLLDHIS---RRTLKLGAVETLVLDEADEMLN 168
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++SII +P + RQTL+FSAT+ +
Sbjct: 169 MGFLEDIESIIKQVP------------------------ENRQTLLFSATMPDDIKRIGV 204
Query: 410 DFRKKLKHGSLK 421
F K +H +K
Sbjct: 205 QFMKDPEHVRIK 216
>gi|350638693|gb|EHA27049.1| hypothetical protein ASPNIDRAFT_130294 [Aspergillus niger ATCC
1015]
Length = 793
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 129/254 (50%), Gaps = 49/254 (19%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGA 218
EEE SE+ ++ ++ E L +++ + + F PTPIQ+ IP A GK DI+G+
Sbjct: 268 EEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALL-GK-DIVGS 325
Query: 219 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELA 276
A TGSGKT AF +PI++RLL + P+ R I+ PTRELA
Sbjct: 326 AVTGSGKTAAFVVPILERLL-------------------FRPRKVPTSRVAILMPTRELA 366
Query: 277 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 336
+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M V
Sbjct: 367 VQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTV 426
Query: 337 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 396
+ TL VLDEADRM+E+G EL I+ +P K R
Sbjct: 427 D--TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSR 460
Query: 397 QTLVFSATIALSAD 410
QT++FSAT+ + D
Sbjct: 461 QTMLFSATMTDTVD 474
>gi|344267898|ref|XP_003405802.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Loxodonta
africana]
Length = 820
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|73996608|ref|XP_851051.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2
[Canis lupus familiaris]
Length = 820
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|410964263|ref|XP_003988675.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Felis catus]
Length = 820
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|423137936|ref|ZP_17125579.1| hypothetical protein HMPREF9942_01717 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371958886|gb|EHO76587.1| hypothetical protein HMPREF9942_01717 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 528
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFIEDIEKI---LTFTN 179
>gi|341882300|gb|EGT38235.1| hypothetical protein CAEBREN_08382 [Caenorhabditis brenneri]
Length = 554
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 125/244 (51%), Gaps = 49/244 (20%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
+SE ++T+ + +L + + + + + K TP+Q ACIP DI+G A TG
Sbjct: 72 ISEENMTTK--KFQQLGVASWITQQLQTMHIKTATPVQAACIPKILDGS--DILGCARTG 127
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 282
+GKTLAF +PI+Q+L P G + ALI+TPTRELA Q+ D
Sbjct: 128 TGKTLAFAIPILQKL-------------------SVDPYG-IFALILTPTRELAFQIADQ 167
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH-TL 341
V K I ++ IVGG S +Q R L RP +VV TPGRL +L+ + + ++ +
Sbjct: 168 FVAVGKPITLKCSVIVGGRSLIQQARELSERPHIVVATPGRLADLIESDQDVIAKVFKKI 227
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 401
FFVLDEADRM+E + +L+ I + +P +KRQTL+
Sbjct: 228 QFFVLDEADRMLEGQYNDQLKPIFESIP------------------------QKRQTLLL 263
Query: 402 SATI 405
SATI
Sbjct: 264 SATI 267
>gi|430749671|ref|YP_007212579.1| DNA/RNA helicase [Thermobacillus composti KWC4]
gi|430733636|gb|AGA57581.1| DNA/RNA helicase, superfamily II [Thermobacillus composti KWC4]
Length = 517
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 135/251 (53%), Gaps = 54/251 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E L P +++++ +GF+E TPIQ IP A D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFGLEPKVLQAVTEMGFEESTPIQAKAIPIA--MSGADLIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ E E+ + AL++TPTRELA+QV D L ++A+ +R
Sbjct: 62 SKIPPEEER--------------------IVALVMTPTRELAIQVADELGKLARYKGIRT 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK +P++++GTPGRL + ++ + + L + VLDEAD M++
Sbjct: 102 LPIYGGQDIGRQIRALKKKPQIIIGTPGRLLDHIN---RKTIRLDDVQTVVLDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++ +I+ ++P ++RQT++FSAT+ L+
Sbjct: 159 MGFMEDITTILSLVP------------------------EERQTMLFSATMPPNIQKLAQ 194
Query: 410 DFRKKLKHGSL 420
F + +H S+
Sbjct: 195 QFLRNPEHVSV 205
>gi|142982611|sp|P0C2N8.1|DRS1_NEUCR RecName: Full=ATP-dependent RNA helicase drs-1
Length = 829
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 124/242 (51%), Gaps = 49/242 (20%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E ++ E+ L +++ + +GF +PTPIQ IP + GK D++G A TGSGKT AF
Sbjct: 291 EMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISL-MGK-DVVGGAVTGSGKTAAFV 348
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAK 288
+PI++RLL Y PK R +I+TPTRELA+Q ++A
Sbjct: 349 VPILERLL-------------------YRPKKVPTTRVVILTPTRELAIQCHAVAVKLAS 389
Query: 289 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
+++ VGG+S + QE L+ RP++V+ TPGR + M V+ T+ VLDE
Sbjct: 390 HTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD--TIEILVLDE 447
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 408
ADRM+E+G EL I+ LP K RQT++FSAT+ S
Sbjct: 448 ADRMLEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSS 483
Query: 409 AD 410
D
Sbjct: 484 VD 485
>gi|41327771|ref|NP_004809.2| probable ATP-dependent RNA helicase DDX23 [Homo sapiens]
gi|397510970|ref|XP_003825856.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Pan paniscus]
gi|160385708|sp|Q9BUQ8.3|DDX23_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=100 kDa U5 snRNP-specific protein; AltName:
Full=DEAD box protein 23; AltName: Full=PRP28 homolog;
AltName: Full=U5-100kD
gi|12803125|gb|AAH02366.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapiens]
gi|119578415|gb|EAW58011.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|119578419|gb|EAW58015.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|123981044|gb|ABM82351.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|123995847|gb|ABM85525.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|189065458|dbj|BAG35297.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|294783794|ref|ZP_06749118.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium sp.
1_1_41FAA]
gi|294480672|gb|EFG28449.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium sp.
1_1_41FAA]
Length = 529
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 120/198 (60%), Gaps = 27/198 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E E ++ H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------ENFETSDH-----HIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 108
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +FVLDEAD M+
Sbjct: 109 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFVLDEADEMLN 165
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 166 MGFIEDIEKI---LTFTN 180
>gi|445499097|ref|ZP_21465952.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
gi|444789092|gb|ELX10640.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
Length = 550
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 126/233 (54%), Gaps = 43/233 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P +++++ G+ PTPIQ IP QG+ D++GAA+TG+GKT F LPI+
Sbjct: 67 FADFGLSPHILRALTDQGYVHPTPIQAQAIPVLL-QGR-DVMGAAQTGTGKTAGFALPII 124
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
Q LL + +P H +RALI+TPTRELA+QV +++K A+ +R
Sbjct: 125 QMLL-------------AHASTSTSPARHPVRALILTPTRELAVQVAENVKAYAQHTPLR 171
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GGM + Q +LKA E+V+ TPGRL + + E+ + L + V+DEADRM+
Sbjct: 172 STVVFGGMDMKGQTVILKAGVEIVIATPGRLLDHV---EQKNISLGQVQMLVMDEADRML 228
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G +LQ II++LP KRQ L+FSAT +
Sbjct: 229 DMGFLPDLQRIINLLP------------------------AKRQNLMFSATFS 257
>gi|261337192|ref|NP_001100263.2| probable ATP-dependent RNA helicase DDX23 [Rattus norvegicus]
gi|149032134|gb|EDL87046.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 819
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 442
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 443 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 491
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 492 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 548
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 549 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 607
Query: 405 I 405
+
Sbjct: 608 M 608
>gi|300120949|emb|CBK21191.2| unnamed protein product [Blastocystis hominis]
Length = 634
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 116/192 (60%), Gaps = 13/192 (6%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
++EA++ W E LH L++ + ++ +PT IQ+ I AA +GK D++GAA TG
Sbjct: 129 IAEAKLLYGSTEWTEFHLHDSLVQKLTQIQCAKPTVIQEKAI-EAAFRGK-DVLGAAPTG 186
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 282
SGKTLAF +P++ LL+ EE E+AE ++R +II+PTREL+LQ+
Sbjct: 187 SGKTLAFCVPVIDWLLKHAS------EEPAEKAE-----WNVRCIIISPTRELSLQINRV 235
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
+ + + N+R ++GG++ KQER+L PE+++GTPGR+W M + L L
Sbjct: 236 ITRLTENTNIRTAGLIGGLAIPKQERMLSHNPEIIIGTPGRIWYFMENYKLGPSNLKNLR 295
Query: 343 FFVLDEADRMIE 354
F V DEAD++++
Sbjct: 296 FIVWDEADKLVQ 307
>gi|291389065|ref|XP_002711079.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Oryctolagus
cuniculus]
Length = 820
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|164428960|ref|XP_001728501.1| hypothetical protein NCU11175 [Neurospora crassa OR74A]
gi|157072353|gb|EDO65410.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 857
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 124/242 (51%), Gaps = 49/242 (20%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E ++ E+ L +++ + +GF +PTPIQ IP + GK D++G A TGSGKT AF
Sbjct: 291 EMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISL-MGK-DVVGGAVTGSGKTAAFV 348
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAK 288
+PI++RLL Y PK R +I+TPTRELA+Q ++A
Sbjct: 349 VPILERLL-------------------YRPKKVPTTRVVILTPTRELAIQCHAVAVKLAS 389
Query: 289 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
+++ VGG+S + QE L+ RP++V+ TPGR + M V+ T+ VLDE
Sbjct: 390 HTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD--TIEILVLDE 447
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 408
ADRM+E+G EL I+ LP K RQT++FSAT+ S
Sbjct: 448 ADRMLEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSS 483
Query: 409 AD 410
D
Sbjct: 484 VD 485
>gi|114644988|ref|XP_509035.2| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2 [Pan
troglodytes]
gi|410219876|gb|JAA07157.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410251880|gb|JAA13907.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410291824|gb|JAA24512.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410334543|gb|JAA36218.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
Length = 820
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|332206915|ref|XP_003252542.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX23 [Nomascus leucogenys]
Length = 778
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|21226849|ref|NP_632771.1| ATP-dependent RNA helicase [Methanosarcina mazei Go1]
gi|20905151|gb|AAM30443.1| ATP-dependent RNA helicase [Methanosarcina mazei Go1]
Length = 587
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 117/191 (61%), Gaps = 24/191 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ L L +K++ + GF+EPTPIQ+ IP +G+ DIIG A+TG+GKT AFG PI+
Sbjct: 7 FKALGLSDSTLKALKKKGFEEPTPIQEKVIPLFL-KGEADIIGQAQTGTGKTTAFGAPII 65
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ E+ GH++A+I+TPTRELA+QV++ L + + +
Sbjct: 66 EKIPEK--------------------SGHVQAIILTPTRELAIQVSEELNSIKGDKKLYI 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
VPI GG S +Q R+LK+ ++VVGTPGR+ + + E+ + L +++FVLDEAD M+
Sbjct: 106 VPIYGGQSMTQQLRVLKSGVDIVVGTPGRVIDHL---ERKSLNLEHIAYFVLDEADEMLN 162
Query: 355 NGHFRELQSII 365
G +++ I+
Sbjct: 163 MGFIDDIKEIL 173
>gi|121699888|ref|XP_001268209.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|134034061|sp|A1CTZ6.1|DBP10_ASPCL RecName: Full=ATP-dependent RNA helicase dbp10
gi|119396351|gb|EAW06783.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 935
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 147/314 (46%), Gaps = 60/314 (19%)
Query: 105 PGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVS 164
P + + D G + + N++ K K++ KKI + + DD +E ++
Sbjct: 8 PALSENEFDITGALFQNDSESDNERSSAKSKRQPKKKIPSQDLDFLGDVNDDDGDEAFIA 67
Query: 165 EAEISTEFDAWN-------------ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
+ + S A N + L L+K+I R GF PTPIQ+ IP
Sbjct: 68 QQQTSANRKASNLKGRTVKKGGGFQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQ 127
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 271
D++G A TGSGKT AF +P++++L K G R LI++P
Sbjct: 128 --DVVGMARTGSGKTAAFVIPMIEKLRSHSTKVGA------------------RGLILSP 167
Query: 272 TRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
+RELALQ +KE+ KG +++ V +VGG S E+Q ++ P++V+ TPGR L
Sbjct: 168 SRELALQTLKVVKELGKGTDLKCVLLVGGDSLEEQFTMMAGNPDIVIATPGRFLHLKV-- 225
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 391
E +L +L+++ + V DEADR+ E G +L I+ LP
Sbjct: 226 EMNL-DLYSIRYVVFDEADRLFEMGFAAQLTEILHGLP---------------------- 262
Query: 392 QRKKRQTLVFSATI 405
RQTL+FSAT+
Sbjct: 263 --PNRQTLLFSATL 274
>gi|124430514|ref|NP_001074450.1| probable ATP-dependent RNA helicase DDX23 [Mus musculus]
gi|148672229|gb|EDL04176.1| mCG18410, isoform CRA_a [Mus musculus]
Length = 819
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 442
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 443 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 491
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 492 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 548
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 549 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 607
Query: 405 I 405
+
Sbjct: 608 M 608
>gi|396488909|ref|XP_003842973.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
gi|312219551|emb|CBX99494.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
Length = 811
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 120/239 (50%), Gaps = 49/239 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ + L +++ + +GF EPTPIQ IP A QGK D++G AETGSGKT AF +PI
Sbjct: 281 SFQAMSLSRPILRGLAAVGFSEPTPIQNKAIPIAM-QGK-DVVGGAETGSGKTAAFLIPI 338
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGIN 291
++RLL Y PK R I PTRELA+Q + ++A +
Sbjct: 339 LERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTD 379
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ + GG ST+ QE +LK RP++V+ TPGR + M VE L VLDEADR
Sbjct: 380 ITFALMAGGFSTKDQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--HLEILVLDEADR 437
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
M+E G +L I+ +P K RQT++FSAT+ + D
Sbjct: 438 MLEEGFESQLNEILTTIP------------------------KSRQTMLFSATMTSTVD 472
>gi|301783663|ref|XP_002927245.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Ailuropoda melanoleuca]
gi|281343724|gb|EFB19308.1| hypothetical protein PANDA_017010 [Ailuropoda melanoleuca]
Length = 820
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|68484469|ref|XP_713845.1| hypothetical protein CaO19.8289 [Candida albicans SC5314]
gi|68484548|ref|XP_713805.1| hypothetical protein CaO19.672 [Candida albicans SC5314]
gi|74656226|sp|Q59W52.1|PRP28_CANAL RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|46435319|gb|EAK94703.1| hypothetical protein CaO19.672 [Candida albicans SC5314]
gi|46435361|gb|EAK94744.1| hypothetical protein CaO19.8289 [Candida albicans SC5314]
Length = 581
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 130/233 (55%), Gaps = 24/233 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
WNE ++ L+ I +LG++EPT +Q+A IP A K D++G AETGSGKTLAF +P++
Sbjct: 170 WNEGSINDKLVSIISQLGYEEPTSVQRASIPLALK--KRDVVGVAETGSGKTLAFLIPVL 227
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+L E K + E P G LI+ PTRELALQ+T ++ K + +V
Sbjct: 228 NYILSIDENYLKYEKISNE------PVG----LILAPTRELALQITKEAEKFCKKLGYQV 277
Query: 295 VPIVGGMSTEKQ-ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+PI+GG + ++ + L+V TPGR L+ E+ +V+L V+DEADRMI
Sbjct: 278 LPIIGGHHYQDTINKIDQTGVHLIVATPGR---LVDSIERKIVDLSKCYCLVMDEADRMI 334
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G ++L ++D LP +Q + + +KR T++F+ATI+
Sbjct: 335 DMGFEKDLNKVLDKLPT--------EKQLSSTIDGRIFHLEKRSTMMFTATIS 379
>gi|404497424|ref|YP_006721530.1| ATP-dependent RNA helicase RhlE [Geobacter metallireducens GS-15]
gi|418066827|ref|ZP_12704184.1| DEAD/DEAH box helicase domain protein [Geobacter metallireducens
RCH3]
gi|78195025|gb|ABB32792.1| ATP-dependent RNA helicase RhlE [Geobacter metallireducens GS-15]
gi|373559816|gb|EHP86098.1| DEAD/DEAH box helicase domain protein [Geobacter metallireducens
RCH3]
Length = 451
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 120/233 (51%), Gaps = 48/233 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E LHP +M + G+ PTPIQ IP +G+ D++G A+TG+GKT AF LPI+
Sbjct: 3 FKEFNLHPQVMAGVTAAGYTTPTPIQAQAIPTVM-EGR-DVMGLAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
RL + GE +G +RAL+I PTRELA Q+ D + + +R
Sbjct: 61 HRLAQ------------GE-------RGRVRALVIAPTRELAEQINDSFVTLGRQTRLRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GG++ Q + LKA E+VV PGRL + M+ G ++L L VLDEAD+M +
Sbjct: 102 VTVYGGVNVNPQIQKLKAGAEIVVACPGRLLDHMAQGT---IDLSHLEVLVLDEADQMFD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
G +L+ I+ LP KRQTL+FSAT+ +
Sbjct: 159 MGFLPDLRRILKQLP------------------------PKRQTLLFSATMPI 187
>gi|251796145|ref|YP_003010876.1| DEAD/DEAH box helicase [Paenibacillus sp. JDR-2]
gi|247543771|gb|ACT00790.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. JDR-2]
Length = 535
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 136/255 (53%), Gaps = 54/255 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E L P ++++I LGF+E TPIQ IP A D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFGLEPKVLQAITELGFEESTPIQDKSIPIA--MAGSDMIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ E+ + ALI+TPTRELA+QV D + ++ K +R
Sbjct: 62 NKISINEER--------------------IVALIMTPTRELAIQVADEIGKLTKYKGLRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK +P++++GTPGRL + ++ + ++L + VLDEAD M++
Sbjct: 102 LPIYGGQEIGRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVQTVVLDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++QSI+ +P ++RQTL+FSAT+ L+
Sbjct: 159 MGFMEDIQSILKQVP------------------------EERQTLLFSATMPPNIQKLAQ 194
Query: 410 DFRKKLKHGSLKLKQ 424
F K +H ++ KQ
Sbjct: 195 QFLKNPEHVAVISKQ 209
>gi|158259303|dbj|BAF85610.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|260495553|ref|ZP_05815678.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_33]
gi|260196895|gb|EEW94417.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_33]
Length = 528
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFVEDIEKI---LTFTN 179
>gi|169853351|ref|XP_001833356.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coprinopsis
cinerea okayama7#130]
gi|116505566|gb|EAU88461.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coprinopsis
cinerea okayama7#130]
Length = 748
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 141/263 (53%), Gaps = 20/263 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E + +++ I R+G+KEP+PIQ+ IP D+IG AETGSGKT AF +P+
Sbjct: 322 SWEESDIPQVILDCIERIGYKEPSPIQRQAIPIGLQNR--DVIGIAETGSGKTAAFVIPM 379
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ +L L ++ P ALI+ PTRELA Q+ K+ A + +
Sbjct: 380 LAFIL--------TLPIFTDDNRHLGPY----ALILAPTRELAQQIESETKKFATPLGYK 427
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V IVGG + E+Q+ L+ E+++ TPGRL +++ E+H++ L + V+DEADRM+
Sbjct: 428 CVSIVGGRAVEEQQFNLREGAEIIIATPGRLKDVL---ERHVLVLSQCRYIVMDEADRMV 484
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSADF 411
G +L I+D LP E Q E+ + + R T +FSAT+ A+
Sbjct: 485 NLGFEADLTFILDQLPTDTMEGEEQGEKMDVDGETMVKKGRTRVTTLFSATMPPAVERLA 544
Query: 412 RKKLKH-GSLKLKQSVNGLNSIE 433
RK LK ++ + ++ ++++E
Sbjct: 545 RKYLKKPATITIGEAGRAVDTVE 567
>gi|444515387|gb|ELV10886.1| putative ATP-dependent RNA helicase DDX23 [Tupaia chinensis]
Length = 820
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|156121051|ref|NP_001095672.1| probable ATP-dependent RNA helicase DDX23 [Bos taurus]
gi|151554096|gb|AAI47903.1| DDX23 protein [Bos taurus]
gi|296487810|tpg|DAA29923.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Bos taurus]
gi|440905541|gb|ELR55911.1| Putative ATP-dependent RNA helicase DDX23 [Bos grunniens mutus]
Length = 820
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|403382424|ref|ZP_10924481.1| ATP-dependent RNA helicase [Paenibacillus sp. JC66]
Length = 442
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 118/216 (54%), Gaps = 50/216 (23%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 250
+G +PT IQ+ CIP H D+IG A+TG+GKTLAF LPI+QRL +
Sbjct: 1 MGIVQPTEIQERCIPPLLH--GHDVIGRAQTGTGKTLAFVLPILQRLRPD---------- 48
Query: 251 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV-AKGINVRVVPIVGGMSTEKQERL 309
+G ++ALI+ PTRELALQ+T +K+V A + RV+ + GG EKQ R
Sbjct: 49 ----------QGEVQALIVAPTRELALQITAEIKKVTADSEDCRVLAVYGGQDVEKQMRQ 98
Query: 310 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 369
LK + +LVVGTPGRL + + G + L LS VLDEAD+M+ G E+++I+D P
Sbjct: 99 LKNQVQLVVGTPGRLLDHLRRGT---LNLGRLSMLVLDEADQMLHIGFLNEVEAILDATP 155
Query: 370 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ RQT++FSAT+
Sbjct: 156 SS------------------------RQTMLFSATM 167
>gi|420174249|ref|ZP_14680702.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM061]
gi|420193514|ref|ZP_14699365.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM023]
gi|394245183|gb|EJD90500.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM061]
gi|394259781|gb|EJE04612.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM023]
Length = 509
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 62 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 101 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 158 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|358370127|dbj|GAA86739.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 832
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 129/254 (50%), Gaps = 49/254 (19%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGA 218
EEE SE+ ++ ++ E L +++ + + F PTPIQ+ IP A GK DI+G+
Sbjct: 300 EEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALL-GK-DIVGS 357
Query: 219 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELA 276
A TGSGKT AF +PI++RLL + P+ R I+ PTRELA
Sbjct: 358 AVTGSGKTAAFVVPILERLL-------------------FRPRKVPTSRVAILMPTRELA 398
Query: 277 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 336
+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M V
Sbjct: 399 VQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTV 458
Query: 337 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 396
+ TL VLDEADRM+E+G EL I+ +P K R
Sbjct: 459 D--TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSR 492
Query: 397 QTLVFSATIALSAD 410
QT++FSAT+ + D
Sbjct: 493 QTMLFSATMTDTVD 506
>gi|426201453|gb|EKV51376.1| hypothetical protein AGABI2DRAFT_114110 [Agaricus bisporus var.
bisporus H97]
Length = 754
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 123/227 (54%), Gaps = 43/227 (18%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
LMK++ LGF +PTPIQ + IP A GK D++G A TGSGKT AF +P+++RLL
Sbjct: 205 LMKAVTNLGFNKPTPIQASTIPVAL-LGK-DVVGNAVTGSGKTAAFMIPMIERLL----- 257
Query: 244 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMST 303
EKG++A +R L++ PTRELA+Q + +++ ++R+ +VGG+S
Sbjct: 258 ----FREKGKKA------AAIRCLVLVPTRELAVQCYEVGTKLSIHTDIRLCLVVGGLSL 307
Query: 304 EKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 363
+ QE L++RP++V+ TPGRL + + L L V+DEADR++ G EL
Sbjct: 308 KSQEADLRSRPDIVIATPGRLIDHIRNSAS--FSLDALDILVIDEADRILSEGFSDELTE 365
Query: 364 IIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
II P + RQT++FSAT+ S D
Sbjct: 366 IIKSCP------------------------RSRQTMLFSATMTDSVD 388
>gi|149714248|ref|XP_001504169.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 1
[Equus caballus]
Length = 820
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|417404803|gb|JAA49138.1| Putative rna helicase [Desmodus rotundus]
Length = 818
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 384 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 441
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 442 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 490
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 491 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 547
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 548 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 606
Query: 405 I 405
+
Sbjct: 607 M 607
>gi|389873083|ref|YP_006380502.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
gi|388538332|gb|AFK63520.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
Length = 476
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 131/243 (53%), Gaps = 45/243 (18%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
F+++ E+ LHP L+K++ G+ +PTPIQ+ +P G+ DI+GAA+TG+GKT AF L
Sbjct: 15 FESFTEVGLHPDLLKAVMASGYTKPTPIQEQAMPLIM-DGR-DIMGAAQTGTGKTAAFTL 72
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGI 290
P++ RL+ + +P H +RALI+ PTRELA QV + +K +
Sbjct: 73 PLLHRLMPMANSS-------------MSPARHPVRALILAPTRELADQVAESVKRYSHSS 119
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+RV + GG+ Q L+ EL++ TPGRL + + E+ V L +S VLDEAD
Sbjct: 120 PLRVAVVFGGVDMNAQRDQLRKGCELLIATPGRLLDHI---EQKNVSLSQVSVLVLDEAD 176
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
RM++ G +L+ I+ +LP K RQ+L+FSAT S D
Sbjct: 177 RMLDMGFLPDLERIVRLLP------------------------KPRQSLLFSAT--FSND 210
Query: 411 FRK 413
RK
Sbjct: 211 IRK 213
>gi|395215483|ref|ZP_10400949.1| DEAD/DEAH box helicase [Pontibacter sp. BAB1700]
gi|394455827|gb|EJF10233.1| DEAD/DEAH box helicase [Pontibacter sp. BAB1700]
Length = 476
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 121/231 (52%), Gaps = 45/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L ++K++ G+ +PTPIQ+ IP D++G A+TG+GKT AF +P++
Sbjct: 3 FSELNLIDPILKALQAEGYTQPTPIQEQAIPHLL--AGTDVLGCAQTGTGKTAAFAIPVL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L ++ +A + + LI+TPTRELA+Q+ + K VR
Sbjct: 61 QMLHNQKNRASNTI----------------KTLILTPTRELAIQINESFAAYGKNTGVRH 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S Q + LK ++++ TPGRL +L+ G + L + FFVLDEADRM++
Sbjct: 105 TVIFGGVSQHAQVQTLKRGVDVLIATPGRLLDLIGQG---FISLKHVEFFVLDEADRMLD 161
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II MLP K+RQ+L FSAT+
Sbjct: 162 MGFIHDVKRIIPMLP------------------------KQRQSLFFSATM 188
>gi|357008100|ref|ZP_09073099.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
elgii B69]
Length = 529
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 151/283 (53%), Gaps = 56/283 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++E L P ++++I +GF+E TPIQ+ IP A +G+ D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSEFGLEPKVLRAITEMGFEESTPIQEKAIPIAM-EGR-DLIGQAQTGTGKTAAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ + E+ + ALI+ PTRELA+QV + ++++ + +R
Sbjct: 62 NKIDIKEER--------------------IVALIMCPTRELAIQVAEEIEKLGRFKGIRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG KQ R L+ +P++++GTPGRL + ++ + ++L + +LDEAD M++
Sbjct: 102 LPIYGGQDIVKQIRALRKKPQIIIGTPGRLLDHIN---RKTIKLDDVQTVILDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++QSI+ ++P +RQT++FSAT+ L+
Sbjct: 159 MGFMEDIQSILKLVP------------------------DERQTMLFSATMPINIQKLAQ 194
Query: 410 DFRKKLKHGSLKLKQSVNGL--NSIETLSERAGMRANVAIVDL 450
F +H S+ KQ L S L ER A ++D+
Sbjct: 195 QFLSNPEHVSVIPKQVSAPLIDQSYIELHERQKFEALCRLIDM 237
>gi|344230065|gb|EGV61950.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 448
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 45/232 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL + L +S+ + +PT IQ ACIP +GK D IG A+TGSGKT+AFGLP++
Sbjct: 4 FHELGVADWLCESLNSMKIHKPTSIQAACIPEVL-KGK-DCIGGAKTGSGKTIAFGLPML 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ E+ P G + L++TPTRELALQ+ + V +N+RV
Sbjct: 62 HKWSED-------------------PFG-VYGLVLTPTRELALQIAEQFSAVGSSMNIRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMI 353
IVGG +Q ++ +P ++ TPGRL + +++ GE + L + F VLDEADR++
Sbjct: 102 KVIVGGEDMIEQALAIQKKPHFIIATPGRLADHILNSGEDTINGLRRIKFLVLDEADRLL 161
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
N ++L I ++LP KKRQTL+F+AT+
Sbjct: 162 SNSFGKDLDRIFNVLP----------------------DSKKRQTLLFTATV 191
>gi|426224567|ref|XP_004006440.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Ovis aries]
Length = 820
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 139/235 (59%), Gaps = 20/235 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT AF +P+
Sbjct: 392 SWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFLIPL 449
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + K ++ EE+++ P A+I+ PTRELA Q+ + + K + +R
Sbjct: 450 LV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGKPLGIR 498
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI
Sbjct: 499 TVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDEADRMI 555
Query: 354 ENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 556 DMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|402885838|ref|XP_003906352.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Papio anubis]
Length = 818
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 384 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 441
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 442 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 490
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 491 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 547
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 548 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 606
Query: 405 I 405
+
Sbjct: 607 M 607
>gi|84684138|ref|ZP_01012040.1| hypothetical protein 1099457000262_RB2654_16856 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667891|gb|EAQ14359.1| hypothetical protein RB2654_16856 [Rhodobacterales bacterium
HTCC2654]
Length = 439
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 114/190 (60%), Gaps = 20/190 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+N+L L P L+ ++ G++ P+PIQ IP A D++G A+TG+GKT AFGLP++
Sbjct: 4 FNDLGLDPKLLAAVKAAGYQTPSPIQVQAIPHAL--AGTDVLGLAQTGTGKTAAFGLPLV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q+LL +K PKG +RAL++ PTREL Q+ D+L KG +++V
Sbjct: 62 QQLLGGHDK--------------REPKG-VRALVLAPTRELVNQIADNLIAYVKGTHIKV 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+VGG S KQ ++L +++V TPGRL +LM ++ V L T +F VLDEAD+M++
Sbjct: 107 NTVVGGKSINKQVQILAKGTDILVATPGRLIDLM---DRKAVRLDTATFLVLDEADQMLD 163
Query: 355 NGHFRELQSI 364
G L+ I
Sbjct: 164 MGFIHALRRI 173
>gi|2655202|gb|AAB87902.1| U5 snRNP 100 kD protein [Homo sapiens]
Length = 820
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|319893030|ref|YP_004149905.1| cold-shock DEAD-box protein A [Staphylococcus pseudintermedius
HKU10-03]
gi|386318744|ref|YP_006014907.1| DEAD-box ATP dependent RNA helicase [Staphylococcus
pseudintermedius ED99]
gi|317162726|gb|ADV06269.1| Cold-shock DEAD-box protein A [Staphylococcus pseudintermedius
HKU10-03]
gi|323463915|gb|ADX76068.1| DEAD-box ATP dependent RNA helicase, putative [Staphylococcus
pseudintermedius ED99]
Length = 495
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + +++ +GF EPTPIQK IP A +DI+G A+TG+GKT AFG+P++
Sbjct: 4 FTELGVSERTAETLEAMGFTEPTPIQKDSIPFALEN--IDILGQAQTGTGKTGAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G+E +RALI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 EKVV-------------GKEG--------VRALILAPTRELAMQVAEQLREFSRGQKVQV 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM ++Q + LK P++VVGTPGR+ + ++ + ++ + +LDEAD M+
Sbjct: 101 VTVFGGMPIDRQIKSLKRGPQIVVGTPGRVIDHLN---RRTLKPQQIETLILDEADEMMN 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D LP N RQT++FSAT+
Sbjct: 158 MGFIDDMRYIMDKLPSEN-----------------------RQTMLFSATM 185
>gi|126344320|ref|XP_001381629.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Monodelphis
domestica]
Length = 818
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 384 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 441
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 442 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 490
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 491 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 547
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 548 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 606
Query: 405 I 405
+
Sbjct: 607 M 607
>gi|336399893|ref|ZP_08580692.1| hypothetical protein HMPREF0404_02020 [Fusobacterium sp. 21_1A]
gi|336163533|gb|EGN66456.1| hypothetical protein HMPREF0404_02020 [Fusobacterium sp. 21_1A]
Length = 528
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 28/198 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + H++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ENFENLDHIQAIVLTPTRELALQVAEEMNSLSISKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ I L TN
Sbjct: 165 MGFVEDIEKI---LTFTN 179
>gi|50311527|ref|XP_455788.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660268|sp|Q6CJV1.1|DRS1_KLULA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49644924|emb|CAG98496.1| KLLA0F15752p [Kluyveromyces lactis]
Length = 748
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 124/235 (52%), Gaps = 52/235 (22%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+N L L ++K + LG+ P+PIQ A IP A GK DII A TGSGKT AF +PI+
Sbjct: 235 FNSLSLSRPVLKGLGSLGYTSPSPIQSAAIPIALL-GK-DIIAGAVTGSGKTAAFMIPII 292
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHL---RALIITPTRELALQVTDHLKEVAKGIN 291
+RLL Y P H+ R +++TPTRELA+QV D K + K +N
Sbjct: 293 ERLL-------------------YKP-AHIASTRVVVLTPTRELAIQVADVGKNIGKFVN 332
Query: 292 VRVVPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+ VGG++ +QE+ LK RP++V+ TPGR + + V+ ++ V+DEAD
Sbjct: 333 GLTFGLAVGGLNLRQQEQALKTRPDIVIATPGRFIDHLRNSASFSVD--SVEILVIDEAD 390
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
RM+E G ELQ I+ ++P KRQTL+FSAT+
Sbjct: 391 RMLEEGFQEELQEIMSLIP------------------------SKRQTLLFSATM 421
>gi|379725028|ref|YP_005317159.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus 3016]
gi|386727777|ref|YP_006194103.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
gi|378573700|gb|AFC34010.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus 3016]
gi|384094902|gb|AFH66338.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
Length = 422
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 130/233 (55%), Gaps = 47/233 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L P ++K++ + + +PTPIQ+ IP G+ D+ G A+TG+GKT AF LPI+
Sbjct: 3 FQQLQLIPPIIKALAKENYTQPTPIQEQAIPPVL-AGR-DLFGCAQTGTGKTAAFLLPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGINV 292
Q L ++ + P G +R+LI+TPTRELA+Q++D+ K N+
Sbjct: 61 QLLSTQQGR----------------PNGKRVIRSLILTPTRELAIQISDNAKAYGCFTNL 104
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
R IVGG+S QE+LL+ ++++ TPGRL +LM+ G V+L + VLDEADRM
Sbjct: 105 RYGVIVGGVSQRPQEQLLEQGMDILIATPGRLIDLMNQG---FVDLSHVQILVLDEADRM 161
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
++ G +++ II LP+ KRQTL FSAT+
Sbjct: 162 LDMGFIHDMKRIIAKLPV------------------------KRQTLFFSATM 190
>gi|344171941|emb|CCA84567.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia syzygii R24]
Length = 481
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 132/256 (51%), Gaps = 49/256 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
FD + LHP +++++ G+ PTPIQ A IP G+ D++GAA+TG+GKT F L
Sbjct: 3 FDTFG---LHPDILRALAESGYTRPTPIQAAAIPVVV-AGR-DVMGAAQTGTGKTAGFSL 57
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGI 290
PI+Q LL E + +P H +RALI+TPTRELA QV D++ + K
Sbjct: 58 PIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYGKYT 104
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+R + GG+ Q L+ E++V TPGRL + + ++ V L + VLDEAD
Sbjct: 105 ALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLDEAD 161
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
RM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 162 RMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSPEI- 196
Query: 411 FRKKLKHGSLKLKQSV 426
KKL L+ Q++
Sbjct: 197 --KKLAASYLRHPQTI 210
>gi|302654026|ref|XP_003018826.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
gi|291182505|gb|EFE38181.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
Length = 814
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 142/308 (46%), Gaps = 73/308 (23%)
Query: 105 PGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVS 164
P D DEDG+G + E + ++ Q + EE +T S A
Sbjct: 253 PDDLASDEDGSGSESEDDDEIRKQN-----------EFFAPEEGMTESKSTSGAPA---- 297
Query: 165 EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSG 224
++ L L +++ + +GF PTPIQ+ IP A GK D++G A TGSG
Sbjct: 298 ---------SFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALL-GK-DVVGGAVTGSG 346
Query: 225 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDH 282
KT AF +PI++RLL Y P+ R I+ PTRELA+Q +
Sbjct: 347 KTGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNV 387
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
++A ++ +VGG S +QE +LK RP++++ TPGR + M V+ TL
Sbjct: 388 ATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLE 445
Query: 343 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 402
VLDEADRM+E+G EL I+ +P K RQT++FS
Sbjct: 446 ILVLDEADRMLEDGFAEELNEILTTIP------------------------KSRQTMLFS 481
Query: 403 ATIALSAD 410
AT+ S D
Sbjct: 482 ATMTNSVD 489
>gi|242241488|ref|ZP_04795933.1| ATP-dependent RNA helicase [Staphylococcus epidermidis W23144]
gi|242235031|gb|EES37342.1| ATP-dependent RNA helicase [Staphylococcus epidermidis W23144]
Length = 528
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++++ +GFKEPTPIQK IP A DI+G A+TG+GKT AFG+P++
Sbjct: 23 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGD--DILGQAQTGTGKTGAFGIPLI 80
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++++ G++ +++LI+ PTRELA+QV + L+E +KG V+V
Sbjct: 81 EKVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQV 119
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 120 VTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMN 176
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 177 MGFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 204
>gi|187929488|ref|YP_001899975.1| DEAD/DEAH box helicase [Ralstonia pickettii 12J]
gi|404396603|ref|ZP_10988397.1| hypothetical protein HMPREF0989_03294 [Ralstonia sp. 5_2_56FAA]
gi|187726378|gb|ACD27543.1| DEAD/DEAH box helicase domain protein [Ralstonia pickettii 12J]
gi|348613693|gb|EGY63272.1| hypothetical protein HMPREF0989_03294 [Ralstonia sp. 5_2_56FAA]
Length = 493
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 135/261 (51%), Gaps = 53/261 (20%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA--AAHQGKVDIIGAAETGSGKT 226
S FD++ LHP +++++ G+ +PTPIQ A IP A H D++GAA+TG+GKT
Sbjct: 12 SVTFDSFG---LHPDVLRALTESGYTKPTPIQAAAIPVVTAGH----DVMGAAQTGTGKT 64
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKE 285
F LPI+ LL + + +P H +RALI+TPTRELA QV D++ +
Sbjct: 65 AGFSLPIIHNLLPDANTSA-------------SPARHPVRALILTPTRELADQVYDNVAK 111
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
AK +R + GG+ Q L+ E++V TPGRL + + ++ V L + V
Sbjct: 112 YAKYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLV 168
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
LDEADRM++ G +LQ II++LP RQTL+FSAT
Sbjct: 169 LDEADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATF 204
Query: 406 ALSADFRKKLKHGSLKLKQSV 426
+ K+L L+ Q++
Sbjct: 205 SPEI---KRLAASYLRHPQTI 222
>gi|160883549|ref|ZP_02064552.1| hypothetical protein BACOVA_01521 [Bacteroides ovatus ATCC 8483]
gi|237722794|ref|ZP_04553275.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293371813|ref|ZP_06618223.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CMC 3f]
gi|299147643|ref|ZP_07040707.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 3_1_23]
gi|336416998|ref|ZP_08597329.1| hypothetical protein HMPREF1017_04437 [Bacteroides ovatus
3_8_47FAA]
gi|423291591|ref|ZP_17270438.1| hypothetical protein HMPREF1069_05481 [Bacteroides ovatus
CL02T12C04]
gi|156110962|gb|EDO12707.1| DEAD/DEAH box helicase [Bacteroides ovatus ATCC 8483]
gi|229447316|gb|EEO53107.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292633265|gb|EFF51836.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CMC 3f]
gi|298514430|gb|EFI38315.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 3_1_23]
gi|335937042|gb|EGM98952.1| hypothetical protein HMPREF1017_04437 [Bacteroides ovatus
3_8_47FAA]
gi|392662714|gb|EIY56270.1| hypothetical protein HMPREF1069_05481 [Bacteroides ovatus
CL02T12C04]
Length = 374
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 127/231 (54%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++K+I G+ PTPIQ IPAA K DI+G A+TG+GKT +F +PI+
Sbjct: 3 FKELNITEPILKAIEEKGYAVPTPIQGEAIPAAL--AKRDILGCAQTGTGKTASFAIPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L +E A + +G ++ALI+TPTRELALQ+++ + + AK VR
Sbjct: 61 QHLQMNKEAA----KCRG-----------IKALILTPTRELALQISECINDYAKYTQVRH 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG++ Q +L +++V TPGRL +LM+ G H L + +FVLDEADRM++
Sbjct: 106 GVIFGGVNQRPQVDMLHKGIDILVATPGRLLDLMNQGHIH---LDKIQYFVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+ LP K++QTL FSAT+
Sbjct: 163 MGFIHDIKRILPKLP------------------------KEKQTLFFSATM 189
>gi|403224137|dbj|BAM42267.1| DEAD-box family helicase [Theileria orientalis strain Shintoku]
Length = 776
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 126/231 (54%), Gaps = 17/231 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L L++SI + G+ +PTPIQ IP A D+IG A TGSGKT AF LP++
Sbjct: 331 WAESPLPWELLESIKKAGYTKPTPIQMQAIPIALEMR--DLIGIAVTGSGKTAAFVLPML 388
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ KML +E P AL++ P+RELALQ+ D + + R
Sbjct: 389 TYV--------KMLPPLDDETSMDGP----YALVMAPSRELALQIYDETNKFSTYCTCRS 436
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG S E Q L+ E+++GTPGR+ + + ++ L ++ VLDEADRMI+
Sbjct: 437 VAVVGGRSAEAQAFELRKGCEIIIGTPGRIKDCL---DRAYTVLSQCNYVVLDEADRMID 493
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G + I+D +P TN ++ +S+ + ++ + R+ R T +FSAT+
Sbjct: 494 MGFEDVVNEILDCIPTTNLKDDDESKALEQELSTKAGHRRYRITQMFSATM 544
>gi|392394099|ref|YP_006430701.1| DNA/RNA helicase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525177|gb|AFM00908.1| DNA/RNA helicase, superfamily II [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 530
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 132/235 (56%), Gaps = 50/235 (21%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
++ E+ L ++++ +GF+EP+PIQKA IP A VD+IG A+TG+GKT AFG+
Sbjct: 6 LQSFGEISLSKQTLQALSEMGFEEPSPIQKAAIPVAID--GVDLIGQAQTGTGKTAAFGI 63
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGI 290
PI EK PK ++ALI+TPTRELA+QV++ + ++ K
Sbjct: 64 PI---------------------CEKINPKFQAVQALILTPTRELAVQVSEEISKIGKYR 102
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+V+ +PI GG S ++Q R L+ ++VVGTPGR+ + ++ G ++L + VLDEAD
Sbjct: 103 HVKPLPIYGGQSIDRQIRALRFGSQVVVGTPGRILDHLNRGT---LKLQYVKMVVLDEAD 159
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G ++++I+ +P R++RQ ++FSAT+
Sbjct: 160 EMLDMGFVEDIETILKQVP-----------------------REERQVMLFSATM 191
>gi|226468232|emb|CAX69793.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Schistosoma japonicum]
Length = 606
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 139/239 (58%), Gaps = 17/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W E+ + L I ++G+ EPTPIQ+ IP DIIG AETGSGKT
Sbjct: 171 IPNPLRSWAEMNVADELKDVIKKVGYPEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 228
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + ++ K+ E+ E+ E+ P A+I+ PTRELA Q+ + +
Sbjct: 229 AFLIPLLNWI----QRLPKL--ERLEDTEQ-GPY----AIIMAPTRELAQQIEEETVKFG 277
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + ++ V ++GG+S E Q L+ E+V+GTPGRL +++ E + L+ ++ VLD
Sbjct: 278 RPLGIKTVSLIGGLSREDQALKLRMGAEIVIGTPGRLNDVL---ENRYMVLNQCTYIVLD 334
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
EAD+MI+ G E+ +I+ LP+TN + + +E ++ + + K RQT++F+AT+
Sbjct: 335 EADKMIDMGFEPEVNNILTYLPVTNEKPDNEDAEDDSKLLSNFATKHKYRQTVMFTATM 393
>gi|395528498|ref|XP_003766366.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Sarcophilus
harrisii]
Length = 818
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 384 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 441
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 442 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 490
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 491 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 547
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 548 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 606
Query: 405 I 405
+
Sbjct: 607 M 607
>gi|456753028|gb|JAA74080.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Sus scrofa]
Length = 820
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|312375100|gb|EFR22532.1| hypothetical protein AND_15065 [Anopheles darlingi]
Length = 821
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 140/232 (60%), Gaps = 17/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E +++ I ++G+K+PTPIQ+ IP DIIG AETGSGKTLAF +P++
Sbjct: 395 WIESGFPKEILEIIDKVGYKDPTPIQRQAIPIGLQNR--DIIGIAETGSGKTLAFLIPLL 452
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ + K+ E ++ A +G A+I+ PTRELA Q+ + ++ + +R
Sbjct: 453 TWI----QSLPKI------ERQETADQGPY-AIILAPTRELAQQIEEETQKFGTPLGIRT 501
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ V+DEADRMI+
Sbjct: 502 VVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVMDEADRMID 558
Query: 355 NGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 559 MGFEPDVQKILEYMPVTNLKPDTEEAEDASKLMENFNTKKKYRQTVMFTATM 610
>gi|312898631|ref|ZP_07758021.1| DEAD/DEAH box helicase [Megasphaera micronuciformis F0359]
gi|310620550|gb|EFQ04120.1| DEAD/DEAH box helicase [Megasphaera micronuciformis F0359]
Length = 522
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 132/234 (56%), Gaps = 47/234 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+ + L++ +++ ++ +GF+EPTPIQ+ IP A +G D+IG A+TG+GKT A+G+
Sbjct: 6 LEKFKNLQISDVIINALNDMGFEEPTPIQEGSIPVAL-EGH-DMIGQAQTGTGKTAAYGI 63
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P+++++L AG APK L+++I++PTRELA+QV + + +A+
Sbjct: 64 PVLEKIL----AAG-------------APK-ELQSVILSPTRELAIQVAEEINHLAQYTP 105
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
V+ +PI GG E+Q R L+ P+++V TPGRL + M G V+L ++S VLDEAD
Sbjct: 106 VQALPIYGGQDMERQLRRLRKSPQIIVATPGRLIDHMKRGT---VKLSSISTIVLDEADE 162
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M+ G ++ I+ P T RQTL+FSAT+
Sbjct: 163 MLNMGFIDDINLIMSATPET------------------------RQTLLFSATM 192
>gi|333030556|ref|ZP_08458617.1| DEAD/DEAH box helicase domain protein [Bacteroides coprosuis DSM
18011]
gi|332741153|gb|EGJ71635.1| DEAD/DEAH box helicase domain protein [Bacteroides coprosuis DSM
18011]
Length = 378
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 129/232 (55%), Gaps = 40/232 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQ-KACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+ EL + +++++ G+ PTPIQ +A +PA HQ DI+G A+TG+GKT AF +PI
Sbjct: 3 FKELNIIEPILQALTEKGYSTPTPIQEQAILPAIDHQ---DILGLAQTGTGKTAAFSIPI 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q L L+ +E E+ K +RALI+TPTRELA+Q+ + LK+ + +++
Sbjct: 60 IQHL---------HLDSLQKEGEEKIAKRAIRALILTPTRELAIQIGESLKDYTRYTDLQ 110
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
I GG+ Q LKA +++V TPGRL +LM G ++++ + FVLDEADRM+
Sbjct: 111 YTVIFGGVKQGSQVNRLKAGVDILVATPGRLLDLMHQGH---IKINKVQHFVLDEADRML 167
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G +++ ++ LP K RQTL FSAT+
Sbjct: 168 DMGFIHDIKRLLPRLP------------------------KNRQTLFFSATM 195
>gi|193785886|dbj|BAG54673.1| unnamed protein product [Homo sapiens]
Length = 800
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 366 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 423
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 424 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 472
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 473 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 529
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 530 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 588
Query: 405 I 405
+
Sbjct: 589 M 589
>gi|348580205|ref|XP_003475869.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Cavia
porcellus]
Length = 819
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 442
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 443 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 491
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 492 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 548
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 549 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 607
Query: 405 I 405
+
Sbjct: 608 M 608
>gi|255941704|ref|XP_002561621.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586244|emb|CAP93992.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 815
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 122/236 (51%), Gaps = 45/236 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ E L +++ + +GF +PTPIQ+ IP A GK DI+G+A TGSGKT AF +PI+
Sbjct: 306 FQEFNLSRPILRGLAAVGFTDPTPIQRKAIPVAL-LGK-DIVGSAVTGSGKTAAFIVPIL 363
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+RLL K P R +I+ PTRELA+Q + ++A +V
Sbjct: 364 ERLLFRPRKV---------------PTS--RVVILMPTRELAVQCYNVSVKLATFTDVTF 406
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+VGG S +QE +LK RP++++ TPGR + M V+ TL VLDEADRM+E
Sbjct: 407 CQLVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSPSFTVD--TLEILVLDEADRMLE 464
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
+G EL I+ +P K RQT++FSAT+ S D
Sbjct: 465 DGFADELNEILTTIP------------------------KSRQTMLFSATMTDSID 496
>gi|156846782|ref|XP_001646277.1| hypothetical protein Kpol_1032p11 [Vanderwaltozyma polyspora DSM
70294]
gi|160380605|sp|A7TGW7.1|DBP10_VANPO RecName: Full=ATP-dependent RNA helicase DBP10
gi|156116952|gb|EDO18419.1| hypothetical protein Kpol_1032p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 977
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 122/235 (51%), Gaps = 54/235 (22%)
Query: 183 LLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEERE 242
L++ ++++ GF++PTPIQ+ IP K DI+G A TGSGKT AF LP++++L
Sbjct: 131 LILSNVHKKGFRQPTPIQRKTIPLILQ--KRDIVGMARTGSGKTAAFVLPMIEKLKSHSS 188
Query: 243 KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMS 302
K G RA+I++P+RELALQ KE +KG ++R V + GG S
Sbjct: 189 KIGA------------------RAVILSPSRELALQTHRVFKEFSKGTHLRSVLLTGGDS 230
Query: 303 TEKQERLLKARPELVVGTPGRLWEL---MSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
E Q ++ + P+++V TPGR L MS ++L T+ + V DEADR+ E G
Sbjct: 231 LEDQFSMMMSNPDVIVATPGRFLHLKVEMS------LDLKTVEYVVFDEADRLFEMGFQE 284
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS-ADFRK 413
+L ++ LPM RQTL+FSAT+ S DF K
Sbjct: 285 QLNELLAALPMN------------------------RQTLLFSATLPSSLVDFAK 315
>gi|402591380|gb|EJW85309.1| hypothetical protein WUBG_03780, partial [Wuchereria bancrofti]
Length = 676
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 132/233 (56%), Gaps = 17/233 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L + I ++G+KEPTPIQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 308 WEEAGLPSEVFDVIMKIGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFLIPLL 365
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ + + G + + P A+I+ PTRELA Q+ + + + + +R
Sbjct: 366 VWITS-------IPKFHGNDEQDTGPY----AIIMAPTRELAQQIEEETVKFGQLLGIRT 414
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG S E+Q L+ E+V+ TPGRL +++ E + L ++ +LDEADRM++
Sbjct: 415 VSVIGGASREEQGLKLRLGVEVVIATPGRLLDVL---ENRYLSLDQCTYVILDEADRMLD 471
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIA 406
G E+Q +++ +P+TN + + + + + + +KK RQT++F+AT++
Sbjct: 472 MGFEPEVQKVLEYIPVTNLKPDTEDAEKEESIMENFFSKKKYRQTVMFTATMS 524
>gi|171913474|ref|ZP_02928944.1| DEAD/DEAH box helicase-like protein [Verrucomicrobium spinosum DSM
4136]
Length = 452
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 127/234 (54%), Gaps = 48/234 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGLP 232
+ L LH ++K+I G+ EPTPIQ A IP A H D+IG A+TG+GKT AF LP
Sbjct: 3 FRALGLHENILKAIQEAGYSEPTPIQAAAIPQVVAGH----DMIGIAQTGTGKTAAFTLP 58
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
++ L + L +G P ++ALI+ PTREL Q+ D+++ AK + +
Sbjct: 59 MLHLLAQ--------LHGQG-------PLRGIKALILAPTRELVAQIHDNVRAYAKHLPL 103
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
+V I GG+ Q L+A +LV+ TPGRL +LM G++H ++L F VLDEADRM
Sbjct: 104 KVAMIFGGVGERPQIEALRAGTDLVIATPGRLIDLM--GQRH-GNFNSLEFLVLDEADRM 160
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
++ G ++ I+ LP KKRQTL+FSAT++
Sbjct: 161 LDMGFLPSIKRIVKALP------------------------KKRQTLLFSATLS 190
>gi|375007039|ref|YP_004980670.1| DEAD-box ATP-dependent RNA helicase cshA [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359285886|gb|AEV17570.1| DEAD-box ATP-dependent RNA helicase cshA [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 467
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L +MK+I R+GF+E TPIQ IP + Q K D+IG A+TG+GKT AFG+PI+
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSL-QNK-DVIGQAQTGTGKTAAFGIPIV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ ++AL++ PTRELA+QV++ L ++ VRV
Sbjct: 62 EKV--------------------NVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG ++Q R LK P ++VGTPGR+ + ++ G L +HT+ VLDEAD M+
Sbjct: 102 LPIYGGQDIDRQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTV---VLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P +RQTL+FSAT+
Sbjct: 159 MGFIEDIEAILSHVP------------------------AERQTLLFSATM 185
>gi|390339167|ref|XP_789805.2| PREDICTED: probable ATP-dependent RNA helicase DDX23
[Strongylocentrotus purpuratus]
Length = 785
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 135/232 (58%), Gaps = 17/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E L + I +G+K+P+PIQ+ IP D+IG AETGSGKT AF +P++
Sbjct: 358 WDEYGLPKHITDIIAEVGYKDPSPIQRQAIPIGLQNR--DVIGVAETGSGKTAAFLIPLL 415
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K+ ++ ++ YA +I+ PTRELA Q+ + + K + +R
Sbjct: 416 VWI----STLPKIERDEDKDQGPYA-------IILAPTRELAQQIEEETIKFGKPLGIRT 464
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V I+GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 465 VTIIGGISREDQGFKLRLGCEIVIATPGRLIDVLEN--RYLV-LCQCTYVVLDEADRMID 521
Query: 355 NGHFRELQSIIDMLPMTNGSNEG-QSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++Q I++ LP+TN + ++E + + + ++K RQT++F+AT+
Sbjct: 522 MGFEPDVQKILEYLPVTNQKPDSEEAEDSAKLLANFASKKKYRQTVMFTATM 573
>gi|336372365|gb|EGO00704.1| hypothetical protein SERLA73DRAFT_105076 [Serpula lacrymans var.
lacrymans S7.3]
Length = 681
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 43/227 (18%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
++K++ +G +PTPIQ A +P A GK D++G A TGSGKT AF +PI++RLL
Sbjct: 197 IIKALTTMGLHKPTPIQAAAVPVAL-LGK-DVVGGAVTGSGKTAAFTIPIIERLL----- 249
Query: 244 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMST 303
+KG+ A R L++ PTRELA+Q + +A +VR +VGG+S
Sbjct: 250 ----YRDKGKNA------AATRCLVVVPTRELAVQCFEVGTRMAGHTDVRFCLVVGGLSL 299
Query: 304 EKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 363
+ QE L++RP++++ TPGRL + + L L VLDEADRM+E+G EL
Sbjct: 300 KSQEAALRSRPDVLIATPGRLIDHLHNSPS--FTLDALDILVLDEADRMLEDGFADELTE 357
Query: 364 IIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
I+ P++ RQT++FSAT+ S D
Sbjct: 358 IVKACPVS------------------------RQTMLFSATMTDSVD 380
>gi|300856701|ref|YP_003781685.1| RNA helicase [Clostridium ljungdahlii DSM 13528]
gi|300436816|gb|ADK16583.1| predicted RNA helicase [Clostridium ljungdahlii DSM 13528]
Length = 525
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 126/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++L L P ++++I +GF+EP+ IQ IP D+IG A+TG+GKTLAFG P++
Sbjct: 6 FSDLNLDPKVLQAIDDMGFEEPSQIQAESIPVILDGN--DVIGQAQTGTGKTLAFGAPML 63
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ + + H+ ALI+TPTRELA+QV D L +AK V +
Sbjct: 64 SKITTKSK--------------------HISALIVTPTRELAIQVNDELSRIAKFKKVAL 103
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG ++Q R LK ++VVGTPGR+ + + ++ ++L + F +LDEAD M++
Sbjct: 104 LPIYGGQPIDRQIRSLKRGMDVVVGTPGRILDHI---KRKTLDLSNIEFLILDEADEMLD 160
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++II TN RQTL+FSAT+
Sbjct: 161 MGFIEDIENII---KATNSD---------------------RQTLLFSATM 187
>gi|258516257|ref|YP_003192479.1| DEAD/DEAH box helicase [Desulfotomaculum acetoxidans DSM 771]
gi|257779962|gb|ACV63856.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 539
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 130/232 (56%), Gaps = 50/232 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L+ +++++ +GF+EPTPIQ+ IP + +GK DIIG A+TG+GKT AF +P++
Sbjct: 14 FGELTLNSRIVQALVNMGFEEPTPIQQKTIPISL-EGK-DIIGQAQTGTGKTAAFAIPVL 71
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ R ++ALIITPTRELA+QV + + + K +R
Sbjct: 72 EKIDSRRNG--------------------VQALIITPTRELAIQVAEEISNIGKYCRIRA 111
Query: 295 VPIVGGMSTEKQERLLK-ARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+PI GG S ++Q + LK R ++V+GTPGRL + + G L ++ T+ VLDEAD M+
Sbjct: 112 LPIYGGQSIDRQIKALKQQRVQIVIGTPGRLLDHLRRGTLRLEQVATV---VLDEADEML 168
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G ++++I++ P T RQT +FSATI
Sbjct: 169 DMGFIEDIEAILNQTPTT------------------------RQTFLFSATI 196
>gi|353237187|emb|CCA69166.1| related to DRS1-RNA helicase of the DEAD box family [Piriformospora
indica DSM 11827]
Length = 767
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 121/227 (53%), Gaps = 43/227 (18%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
+MKS+ L F PTPIQ A IP A GK DI+G A TGSGKT AF +PI++RLL
Sbjct: 187 IMKSLTSLSFHTPTPIQAATIPVALL-GK-DIVGNAVTGSGKTAAFMIPILERLL----- 239
Query: 244 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMST 303
+KG+ A R L++ PTRELA+Q + ++A ++++ +VGG+S
Sbjct: 240 ----YRQKGKNA------AATRCLVLVPTRELAVQCFEVGTKLAAHTDIQMSLVVGGLSL 289
Query: 304 EKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 363
+ QE L+++P+LV+ TPGRL + + L L VLDEADRM+ +G EL+
Sbjct: 290 KAQEATLRSKPDLVIATPGRLIDHLRNSP--TFNLDALDVLVLDEADRMLSDGFADELEE 347
Query: 364 IIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
I+ P + RQT++FSAT+ S D
Sbjct: 348 IVKSCP------------------------RSRQTMLFSATMTDSVD 370
>gi|449663558|ref|XP_002166443.2| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Hydra
magnipapillata]
Length = 632
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 128/232 (55%), Gaps = 17/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W + L ++ I LG+ +PTPIQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 206 WRDSSLPNDILDVILSLGYTDPTPIQRQAIPIGLMNR--DIIGIAETGSGKTAAFVIPLL 263
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ E + + + G A+I+ PTRELA Q+ + + AK + +R
Sbjct: 264 VWITGLPESDRQSVSDNGP-----------FAIILAPTRELAQQIEEETIKFAKKLGIRT 312
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG+S E Q L+ E+V+ TPGRL +++ E + L S+ V+DEADRMI+
Sbjct: 313 VAVIGGLSREDQGFQLRLGCEIVIATPGRLIDVL---ENRYLVLSQCSYVVMDEADRMID 369
Query: 355 NGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++Q I++ LP+TN + ++E S + K RQT++F+AT+
Sbjct: 370 MGFEPDVQKILEHLPVTNIKPDTEEAEDVNVIAKNYSSKDKYRQTVMFTATM 421
>gi|409407327|ref|ZP_11255778.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
gi|386433078|gb|EIJ45904.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
Length = 487
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 129/244 (52%), Gaps = 48/244 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P ++K++ G+ PTPIQ IP QG+ D++GAA+TG+GKT F LPI+
Sbjct: 18 FEDFGLSPDILKALSEQGYVHPTPIQAQAIPVVL-QGR-DVMGAAQTGTGKTAGFSLPII 75
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
QRLL + +P H +RALI+TPTRELA QV +++K ++ +R
Sbjct: 76 QRLL-------------AHASHSASPARHPVRALILTPTRELADQVAENVKAYSRFTPLR 122
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG+ Q L+A E+V+ TPGRL + + ++ V L V+DEADRM+
Sbjct: 123 STVVFGGVDMAPQTATLRAGVEIVIATPGRLLDHV---QQKTVNLSQTQILVMDEADRML 179
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LS 408
+ G +LQ II++LP K+RQ L+FSAT + L+
Sbjct: 180 DMGFLPDLQRIINLLP------------------------KQRQNLLFSATFSPEIKKLA 215
Query: 409 ADFR 412
A F+
Sbjct: 216 ASFQ 219
>gi|317132682|ref|YP_004091996.1| DEAD/DEAH box helicase [Ethanoligenens harbinense YUAN-3]
gi|315470661|gb|ADU27265.1| DEAD/DEAH box helicase domain protein [Ethanoligenens harbinense
YUAN-3]
Length = 435
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 134/231 (58%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++L+L+P ++K++ G+++PTPIQ+ IP K D++G A+TG+GKT AF +PI+
Sbjct: 3 FSQLQLNPSILKALAAAGYEQPTPIQEQSIPYILE--KRDLLGTAQTGTGKTAAFAVPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
L E ++ G H+RAL+++PTRELA+Q+ + + ++ +++R
Sbjct: 61 DLLCREHGQS------TGSR--------HIRALVLSPTRELAIQIKESFDQYSRFLHLRN 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S Q L+ +++V TPGRL +LM+ ++H V+L +S+FVLDEADRM++
Sbjct: 107 TVIFGGVSQIPQVSRLREGVDILVATPGRLLDLMN--QRH-VDLSHVSYFVLDEADRMLD 163
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++ +++ LP + RQTL+FSAT+
Sbjct: 164 MGFIHDVHKVVEKLP------------------------QNRQTLLFSATM 190
>gi|156095474|ref|XP_001613772.1| pre-mRNA splicing factor RNA helicase PRP28 [Plasmodium vivax
Sal-1]
gi|148802646|gb|EDL44045.1| pre-mRNA splicing factor RNA helicase PRP28, putative [Plasmodium
vivax]
Length = 1006
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 124/231 (53%), Gaps = 17/231 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L L+K+I + +++PTPIQ IP A D+IG AETGSGKT AF LP++
Sbjct: 583 WEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEM--RDLIGIAETGSGKTAAFVLPML 640
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K L E + P ALII P+RELA+Q+ D + A + R
Sbjct: 641 AYV--------KQLPPLTYETSQDGP----YALIIAPSRELAIQIFDETNKFASYCSCRT 688
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG + E Q L+ E+++GTPGR+ + + EK L+ ++ +LDEADRM++
Sbjct: 689 VAVVGGRNAEAQAFELRKGVEIIIGTPGRIHDCL---EKAYTVLNQCNYVILDEADRMMD 745
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G + I+D +P TN +E + Q + + R R T +FSAT+
Sbjct: 746 MGFEDSVHFILDKIPTTNLKSEDDALALQEEMMAKAGHRLYRLTQMFSATM 796
>gi|307167913|gb|EFN61290.1| Probable ATP-dependent RNA helicase DDX49 [Camponotus floridanus]
Length = 457
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 127/246 (51%), Gaps = 50/246 (20%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E +++L+L+ L+ +G K PT IQ+ CIP G+ D IG A+TGSGKTLAF
Sbjct: 3 EIKDFSDLKLNSWLLAQCDTMGLKNPTLIQQNCIPRIL-AGE-DCIGCAKTGSGKTLAFA 60
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
LPI+Q+L E+ P G + AL++TPTRELA Q+ D + K I
Sbjct: 61 LPILQKLCED-------------------PYG-IFALVLTPTRELAFQIADQFAAIGKAI 100
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
N++ +VGGM Q L RP +VV TPGRL + + + L + F VLDEAD
Sbjct: 101 NLKKCVVVGGMDMMVQGLELSKRPHIVVATPGRLADHLDSCDTF--SLQKIKFLVLDEAD 158
Query: 351 RMIENGHF-RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 409
R++ GHF ++L+ I +P K++Q L+FSAT+ +
Sbjct: 159 RLL-GGHFDKQLKKIFAAVP------------------------KQKQVLLFSATMTDAL 193
Query: 410 DFRKKL 415
D K++
Sbjct: 194 DKVKQI 199
>gi|197246501|gb|AAI69082.1| Ddx23 protein [Rattus norvegicus]
Length = 798
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 364 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 421
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 422 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 470
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 471 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 527
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 528 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 586
Query: 405 I 405
+
Sbjct: 587 M 587
>gi|421871323|ref|ZP_16302945.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
gi|372459950|emb|CCF12494.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
Length = 506
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 126/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NEL L P +++SI +GF+E TPIQ IP A G+ D+IG A+TG+GKT+AFG+P++
Sbjct: 4 FNELGLSPSVLRSISNMGFEEATPIQALTIPVAL-TGR-DLIGQAQTGTGKTVAFGIPMI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ H++ +++ PTRELA+QV++ L ++ + ++
Sbjct: 62 EKI--------------------DTSSNHIQGIVLAPTRELAVQVSEELIKLGQYTGIKT 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK P ++V TPGRL + ++ + + L + VLDEAD M+
Sbjct: 102 LPIYGGQDIMRQIRALKKNPHVIVATPGRLIDHIN---RRTIRLQNIQTLVLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G E++SI++ +P +RQTL+FSAT+
Sbjct: 159 MGFIEEIESILEQIP------------------------DERQTLLFSATM 185
>gi|323490564|ref|ZP_08095770.1| ATP-dependent RNA helicase exp9 [Planococcus donghaensis MPA1U2]
gi|323395830|gb|EGA88670.1| ATP-dependent RNA helicase exp9 [Planococcus donghaensis MPA1U2]
Length = 506
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL + +KS+ R+GF+E TPIQ+ I +GK DIIG A+TG+GKT AFG+P++
Sbjct: 4 FSELNISETTLKSVKRMGFEEATPIQEGTI-RLGMEGK-DIIGQAQTGTGKTTAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ G+++ LII PTRELA+QV++ L + + NVR+
Sbjct: 62 EKI--------------------DTKDGNVQGLIIAPTRELAIQVSEELYRLGQDKNVRI 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GG +Q R LK RP+++VGTPGRL + ++ + ++L ++ +LDEAD M+
Sbjct: 102 LSVYGGQEISRQIRALKNRPQIIVGTPGRLLDHIN---RRTLKLDNVNTLILDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++Q+I+ +P T RQTL+FSAT+
Sbjct: 159 MGFIEDIQTIMASVPDT------------------------RQTLLFSATM 185
>gi|429740488|ref|ZP_19274173.1| DEAD/DEAH box helicase [Porphyromonas catoniae F0037]
gi|429160924|gb|EKY03368.1| DEAD/DEAH box helicase [Porphyromonas catoniae F0037]
Length = 612
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 124/223 (55%), Gaps = 39/223 (17%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
+ +++ LG+++P P+Q+A IP + + D+I A+TG+GKT AFGLP++Q +
Sbjct: 12 ICQAVAELGYEQPMPVQEAVIPHLLGEPQ-DLIALAQTGTGKTAAFGLPLLQNV------ 64
Query: 244 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMS 302
+ L+E GH RAL++ PTREL LQ++D L E +K + +VR++P+ GG S
Sbjct: 65 -ARSLDESKTRTNA---SGHARALVLCPTRELCLQISDDLTEYSKYLPSVRILPVYGGSS 120
Query: 303 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 362
E Q R L+ E++V TPGRL +LM G L E+ T+ VLDEAD M+ G LQ
Sbjct: 121 IEAQIRTLRRGVEVIVATPGRLIDLMERGVASLDEVQTV---VLDEADEMLNMGFTESLQ 177
Query: 363 SIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+I+ +P K+R L+FSAT+
Sbjct: 178 TILAQVP------------------------KERHLLLFSATM 196
>gi|389818136|ref|ZP_10208577.1| ATP-dependent RNA helicase exp9 [Planococcus antarcticus DSM 14505]
gi|388464068|gb|EIM06404.1| ATP-dependent RNA helicase exp9 [Planococcus antarcticus DSM 14505]
Length = 507
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL + +KS+ R+GF+E TPIQ+ I +GK DIIG A+TG+GKT AFG+P++
Sbjct: 4 FSELNISETTLKSVKRMGFEEATPIQEGTI-RLGMEGK-DIIGQAQTGTGKTTAFGIPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ G+++ LII PTRELA+QV++ L + + NVR+
Sbjct: 62 EKI--------------------DTKDGNVQGLIIAPTRELAIQVSEELYRLGQDKNVRI 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GG +Q R LK RP+++VGTPGRL + ++ + ++L ++ +LDEAD M+
Sbjct: 102 LSVYGGQEISRQIRALKNRPQIIVGTPGRLLDHIN---RRTLKLDNVNTLILDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++Q+I+ +P T RQTL+FSAT+
Sbjct: 159 MGFIEDIQTIMASVPDT------------------------RQTLLFSATM 185
>gi|353240957|emb|CCA72800.1| probable U5 snRNP 100 kD protein [Piriformospora indica DSM 11827]
Length = 724
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 137/255 (53%), Gaps = 32/255 (12%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W+E + P ++ I R+G+++PTPIQ+ IP D+IG AETGSGKT
Sbjct: 298 IPYPLRSWDESSIPPQILDVIARIGYEQPTPIQRQAIPIGLQNR--DLIGIAETGSGKTA 355
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + + L +E P ALI+ PTRELA Q+ K++A
Sbjct: 356 AFVIPMLTYIGQ--------LPPLTDENRHLGPY----ALILAPTRELAQQIEAETKKLA 403
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ + V IVGG + E+Q L+ E+++ TPGRL +++ ++H+V L ++ V+D
Sbjct: 404 SPLGYKCVSIVGGRAVEEQAYNLREGAEIIIATPGRLKDVI---DRHVVVLSQCTYVVMD 460
Query: 348 EADRMIENGHFRELQSIIDMLP--MTNGSN----EGQSEQTQTCVTVSSL---------Q 392
EADRM+ G +L I+D LP + G N +G + ++ V++L +
Sbjct: 461 EADRMVHLGFEADLTFILDALPTDLLKGENAMEVDGMTANSKARTRVTTLFSATMPPAVE 520
Query: 393 RKKRQTLVFSATIAL 407
R RQ L +ATIA+
Sbjct: 521 RLARQYLKKAATIAI 535
>gi|325295336|ref|YP_004281850.1| DEAD/DEAH box helicase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065784|gb|ADY73791.1| DEAD/DEAH box helicase domain protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 425
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 131/236 (55%), Gaps = 53/236 (22%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
EF +N+L L + KS+ +GF+ PTPIQK IP A DI+G A+TG+GKT AFG
Sbjct: 12 EF-TFNQLDLK--VQKSLEEMGFESPTPIQKEAIPLALE--GYDIVGQAQTGTGKTAAFG 66
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
+PI++ + RE+ ++A+++TPTRELA+QV L + K
Sbjct: 67 IPIIENI-NSRERG-------------------VKAIVLTPTRELAIQVAHELSLIGKNK 106
Query: 291 NVRVVPIVGGMSTEKQERLLK-ARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
V PI GG+S E+Q +LK R ++VVGTPGR+ +L+S G L++L + F VLDEA
Sbjct: 107 GVSAYPIYGGVSIERQANILKRGRNQIVVGTPGRVKDLISRG---LLKLDRVRFAVLDEA 163
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
D+M++ G +++ I+ P +++QTL+FSAT+
Sbjct: 164 DQMLDMGFIEDIEEILSKTP------------------------REKQTLLFSATM 195
>gi|392531372|ref|ZP_10278509.1| ATP-dependent RNA helicase; cold shock [Carnobacterium
maltaromaticum ATCC 35586]
gi|414082690|ref|YP_006991393.1| DEAD/DEAH box helicase [Carnobacterium maltaromaticum LMA28]
gi|412996269|emb|CCO10078.1| DEAD/DEAH box helicase family protein [Carnobacterium
maltaromaticum LMA28]
Length = 541
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 127/232 (54%), Gaps = 51/232 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L P L++S+ RLGF+E TPIQ+ IP A +GK D+IG A+TG+GKT AFGLP++
Sbjct: 3 FSELGLDPELLQSVERLGFEEATPIQEQTIPLAL-EGK-DVIGQAQTGTGKTAAFGLPML 60
Query: 235 QRL-LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
Q++ L+ R G L+I PTRELA+Q + L +++ VR
Sbjct: 61 QKIDLKNRAVQG---------------------LVIAPTRELAIQTQEELFRLSRDKKVR 99
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V + GG +Q R LK +P +VVGTPGRL + ++ + ++L + VLDEAD M+
Sbjct: 100 VQVVYGGADISRQIRSLKDQPHIVVGTPGRLLDHIN---RRTLKLDQVETLVLDEADEML 156
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II +P K RQTL+FSAT+
Sbjct: 157 NMGFLEDIEKIIKEVP------------------------KTRQTLLFSATM 184
>gi|168046775|ref|XP_001775848.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672855|gb|EDQ59387.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 143/303 (47%), Gaps = 47/303 (15%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
SN A L +A+ + E + L L L+++ LG K PT +Q+ C+P G
Sbjct: 23 SNKKTAAPALLDEDAKAAKEITTFEGLGLTDWLVRACKELGMKRPTLVQQGCVPQIL-AG 81
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 271
K D+ G A+TGSGKT AF LPI+Q+L E P G + AL++TP
Sbjct: 82 K-DVFGLAQTGSGKTAAFALPILQKLAEN-------------------PYG-VFALVLTP 120
Query: 272 TRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
TRELA Q++D K + +N+R +VGGM Q + L RP +V+ TPGRL +
Sbjct: 121 TRELAFQISDQFKALGSEVNLRSTVVVGGMDMTTQAKALMQRPHIVIATPGRLRDHFMND 180
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 391
+ VLDEADR+++ G EL+S+ + +P SN
Sbjct: 181 PGIPDVFAKAKYLVLDEADRLMDVGFESELRSVFETMP----SN---------------- 220
Query: 392 QRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDL 450
RQTL+FSAT+ + L Q G ++E L ++ + ANV V L
Sbjct: 221 ----RQTLLFSATMTSNLKALHDLSLDKAFFYQQYEGFKTVEALQQQYILTPANVKDVYL 276
Query: 451 TNV 453
++
Sbjct: 277 MHI 279
>gi|328869268|gb|EGG17646.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 860
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 126/242 (52%), Gaps = 49/242 (20%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
E+ + + EL L L K++ +LG+ +PTPIQ IP + GK DI+ +A TGSGKT
Sbjct: 228 EVVMDLPTFEELHLSRPLQKAVAKLGYTQPTPIQAKAIPLILN-GK-DILASATTGSGKT 285
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLK 284
AF LPI++RLL Y H R LI+ PTRELALQ +
Sbjct: 286 AAFILPILERLL-------------------YRDATHRVSRVLIVLPTRELALQCHSVFE 326
Query: 285 EVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
+A+ NV+ +VGG+S + QE L+ RP++++ TPGRL + + H V L +
Sbjct: 327 SLAQFTNVQSCLVVGGLSNKVQEHELRKRPDVIIATPGRLIDHLLNA--HDVGLEDIEIL 384
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
VLDEADR+++ G EL +++ P +G RQTL+FSAT
Sbjct: 385 VLDEADRLLDMGFKDELNRVVESCP--DG----------------------RQTLLFSAT 420
Query: 405 IA 406
++
Sbjct: 421 LS 422
>gi|302853426|ref|XP_002958228.1| hypothetical protein VOLCADRAFT_77867 [Volvox carteri f.
nagariensis]
gi|300256416|gb|EFJ40682.1| hypothetical protein VOLCADRAFT_77867 [Volvox carteri f.
nagariensis]
Length = 574
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 126/233 (54%), Gaps = 28/233 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L LL+K+I R+G+K+P+PIQ A IP Q D+IG AETGSGKT AF LP++
Sbjct: 157 WEESGLPSLLIKAIDRVGYKKPSPIQMAAIPLGLQQR--DVIGIAETGSGKTAAFVLPML 214
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ + EE E P A+++ PTRELA Q+ + ++A N R+
Sbjct: 215 SYIMRQPPMT--------EENEADGPY----AVVLAPTRELAQQIEEETHKLAYYTNYRI 262
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+VGG S E+Q L+ E+V+ TPGRL + + ++H L+ ++ VLDEADRMI+
Sbjct: 263 ASVVGGQSIEEQGAKLRKGCEIVIATPGRLLDCI---DRHYAVLNQCNYVVLDEADRMID 319
Query: 355 NGHFRELQSIIDMLP--MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++ ++D +P +G V R R T +FSAT+
Sbjct: 320 LGFEPQVIGVLDAMPSSFLKPDEDG---------AVLEANRTYRTTYMFSATM 363
>gi|260941344|ref|XP_002614838.1| hypothetical protein CLUG_04853 [Clavispora lusitaniae ATCC 42720]
gi|238851261|gb|EEQ40725.1| hypothetical protein CLUG_04853 [Clavispora lusitaniae ATCC 42720]
Length = 748
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 131/256 (51%), Gaps = 47/256 (18%)
Query: 153 NGPDDAEE--ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQ 210
N D AE E +AE ++ L L ++K + LG+ +P+PIQ A IP A
Sbjct: 214 NDEDSAEAIAEFYEKAESDQAHKSFQSLDLARPVLKGLASLGYTKPSPIQSASIPIAL-L 272
Query: 211 GKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIIT 270
GK DI+ A TGSGKT A+ +PI++RLL + K R +I+T
Sbjct: 273 GK-DIVAGAVTGSGKTAAYMIPIIERLLYKSSKVAST-----------------RVVILT 314
Query: 271 PTRELALQVTDHLKEVAKGINVRVVPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMS 329
PTRELA+QV D K++ + +N + VGG++ +QE+ LK RP++VV TPGRL + +
Sbjct: 315 PTRELAIQVCDVGKKIGRYVNNLTFGLAVGGLNLRQQEQQLKTRPDIVVATPGRLIDHIR 374
Query: 330 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS 389
L L V+DEADRM+E G EL I+ ++P
Sbjct: 375 NSAS--FSLDALEILVMDEADRMLEEGFQVELTEILTLIP-------------------- 412
Query: 390 SLQRKKRQTLVFSATI 405
+ KRQT++FSAT+
Sbjct: 413 ---KHKRQTMLFSATM 425
>gi|88801632|ref|ZP_01117160.1| putative ATP-dependent RNA helicase [Polaribacter irgensii 23-P]
gi|88782290|gb|EAR13467.1| putative ATP-dependent RNA helicase [Polaribacter irgensii 23-P]
Length = 432
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 137/252 (54%), Gaps = 48/252 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L P L+K++ G+ +P+PIQ+ IP +GK DI+ +A+TG+GKT F LP++
Sbjct: 3 FKDLGLSPALVKAVEEKGYTKPSPIQEKAIPHIL-EGK-DILASAQTGTGKTAGFTLPVL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L+E + KY P LRAL++TPTRELA QV D+++E +K ++++
Sbjct: 61 QYLVETKH-------------PKYRP---LRALVLTPTRELAAQVHDNVREYSKYVDIKS 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG++ + Q L++ +++V TPGRL +L ++ + + +LDEADRM++
Sbjct: 105 TVVFGGVNAKPQIATLRSGVDILVATPGRLLDLH---DQKALSFKRVEVLILDEADRMLD 161
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 414
G R++ II +P KRQ L+FSAT S D KK
Sbjct: 162 MGFVRDINKIISFMPA------------------------KRQNLMFSAT--FSNDI-KK 194
Query: 415 LKHGSLKLKQSV 426
L G L+ SV
Sbjct: 195 LASGILRDPVSV 206
>gi|336465424|gb|EGO53664.1| hypothetical protein NEUTE1DRAFT_133987 [Neurospora tetrasperma
FGSC 2508]
gi|350295288|gb|EGZ76265.1| Pre-mRNA-splicing ATP-dependent RNA helicase prp-28 [Neurospora
tetrasperma FGSC 2509]
Length = 728
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 28/287 (9%)
Query: 120 EQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELR 179
EQ KNL +KK + K + + +E+ ++ I +W E
Sbjct: 250 EQRKNLGKHWSEKKLEDMKERDWRIFKENFGIA----------TKGGAIPNPMRSWEEST 299
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
L L+ + +G+ EPTPIQ+A IP A D+IG A TGSGKT AF LP++ + E
Sbjct: 300 LPRRLLDIVKNVGYDEPTPIQRAAIPIALQ--ARDLIGVAVTGSGKTAAFLLPLLVYISE 357
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
L E + P ALI+ PTREL Q+ K+ A + VV IVG
Sbjct: 358 --------LPPLTEYNKNDGPY----ALILAPTRELVQQIESEAKKFATPLGFTVVSIVG 405
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
G S E+Q L+ E++V TPGRL + + E+ L+ + ++DEADRMI+ G
Sbjct: 406 GHSLEEQAFALRNGAEIIVATPGRLVDCL---ERRLLVFSQCCYTIMDEADRMIDQGFEE 462
Query: 360 ELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
L I+D +P+TN + +E Q + + RQT++++AT+
Sbjct: 463 PLTKILDAMPVTNEKPDTDDAENPQLMSRYVDGKDRYRQTMMYTATM 509
>gi|227538144|ref|ZP_03968193.1| ATP-dependent RNA helicase [Sphingobacterium spiritivorum ATCC
33300]
gi|227241987|gb|EEI92002.1| ATP-dependent RNA helicase [Sphingobacterium spiritivorum ATCC
33300]
Length = 435
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 131/243 (53%), Gaps = 46/243 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L ++K++ G++ PTPIQ+ IP + D++ A+TG+GKT AF +PI+
Sbjct: 20 FKDLKLIAPILKALEASGYQNPTPIQEQAIPIIFQRK--DLLACAQTGTGKTAAFAIPIL 77
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L +EK + +R L++TPTRELA+Q+ ++ +K + +R
Sbjct: 78 QMLTYSKEKTAQ---------------KRIRTLVLTPTRELAIQIKENFDAYSKELPIRN 122
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG+ + Q L+ ++++ TPGRL +L + G ++L L +FVLDEADRM++
Sbjct: 123 LVIYGGVGQQPQRDALRKGIDILIATPGRLLDLYNQG---FIDLKQLEYFVLDEADRMLD 179
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 414
G +++ +I ++P KKRQTL+FSAT + A+ +K
Sbjct: 180 MGFIHDVKKVISIIP------------------------KKRQTLLFSAT--MPAEIQKL 213
Query: 415 LKH 417
H
Sbjct: 214 ASH 216
>gi|432866547|ref|XP_004070857.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Oryzias
latipes]
Length = 802
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 134/234 (57%), Gaps = 20/234 (8%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 375 WKEYALPAHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFLIPLL 432
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K ++ E P A+I+ PTRELA Q+ + + K + +R
Sbjct: 433 V-WITTLPKIDRI------EDSDQGPY----AVILAPTRELAQQIEEETIKFGKPLGIRT 481
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 482 VAVIGGISREDQGFKLRMGCEIVIATPGRLIDVLEN--RYLV-LGRCTYVVLDEADRMID 538
Query: 355 NGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++Q I++ +P+TN ++E + + T + S + K RQT++F+AT+
Sbjct: 539 MGFEPDVQKILEYIPVTNQKPDTDEAEDPEKMT-MNFESGKHKYRQTVMFTATM 591
>gi|268529640|ref|XP_002629946.1| Hypothetical protein CBG03667 [Caenorhabditis briggsae]
Length = 565
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 125/250 (50%), Gaps = 50/250 (20%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
+D + +SE ++T ++EL + + + + + K TP+Q ACIP DI
Sbjct: 78 NDPQPFQISEDNMTTR--KFSELGVSSWITQQLQTMHIKTATPVQAACIPRILDGS--DI 133
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 275
+G A TG+GKTLAF +PI+Q+L P G + ALI+TPTREL
Sbjct: 134 LGCARTGTGKTLAFAIPILQKL-------------------SIDPYG-IYALILTPTREL 173
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
A Q+ D V K I ++ IVGG S Q R L RP +VV TPGRL +L+ + +
Sbjct: 174 AFQIADQFTAVGKPITLKCSVIVGGRSLIHQARELSERPHIVVATPGRLTDLIESDPEVI 233
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
+ + FFVLDEADRM+E + +L+ I +P +K
Sbjct: 234 AK--KIQFFVLDEADRMLEGQYNDQLKPIFQSIP------------------------EK 267
Query: 396 RQTLVFSATI 405
RQTL+ SATI
Sbjct: 268 RQTLLLSATI 277
>gi|85113073|ref|XP_964459.1| hypothetical protein NCU02803 [Neurospora crassa OR74A]
gi|74654326|sp|Q7SEL0.1|PRP28_NEUCR RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp-28
gi|28926242|gb|EAA35223.1| hypothetical protein NCU02803 [Neurospora crassa OR74A]
Length = 728
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 28/287 (9%)
Query: 120 EQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELR 179
EQ KNL +KK + K + + +E+ ++ I +W E
Sbjct: 250 EQRKNLGKHWSEKKLEDMKERDWRIFKENFGIA----------TKGGAIPNPMRSWEEST 299
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
L L+ + +G+ EPTPIQ+A IP A D+IG A TGSGKT AF LP++ + E
Sbjct: 300 LPRRLLDIVKNVGYDEPTPIQRAAIPIALQ--ARDLIGVAVTGSGKTAAFLLPLLVYISE 357
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
L E + YA LI+ PTREL Q+ K+ A + VV IVG
Sbjct: 358 L-----PPLTEYNKNDGPYA-------LILAPTRELVQQIESEAKKFATPLGFTVVSIVG 405
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
G S E+Q L+ E++V TPGRL + + E+ L+ + ++DEADRMI+ G
Sbjct: 406 GHSLEEQAFALRNGAEIIVATPGRLVDCL---ERRLLVFSQCCYTIMDEADRMIDQGFEE 462
Query: 360 ELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
L I+D +P+TN + +E Q + + RQT++++AT+
Sbjct: 463 PLTKILDAMPVTNEKPDTDDAENPQLMSRYVDGKDRYRQTMMYTATM 509
>gi|161784285|sp|Q5BCU6.2|PRP28_EMENI RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|259486970|tpe|CBF85264.1| TPA: Pre-mRNA-splicing ATP-dependent RNA helicase prp28 (EC
3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BCU6]
[Aspergillus nidulans FGSC A4]
Length = 782
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 150/278 (53%), Gaps = 30/278 (10%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W+E L L++ + R+G+KEPTPIQ+A IP A D+IG A TGSGKT AF LP+
Sbjct: 347 SWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQS--RDLIGVAVTGSGKTAAFLLPL 404
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + E + +E E G A+++ PTRELA Q+ K+ + +
Sbjct: 405 LCYIAEL---------PRIDEFEWRKNDGPY-AIVLAPTRELAQQIEIEAKKFTEPLGFN 454
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI
Sbjct: 455 VVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCI---ERRMLVLSQCCYVIMDEADRMI 511
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR------KKRQTLVFSATIAL 407
+ G + I+D LP+TN + T+ S++ R + RQT++++AT+
Sbjct: 512 DLGFEEPVNKILDALPVTN-----EKPDTEEAEDSSAMSRHLGSKDRYRQTMMYTATMPT 566
Query: 408 SAD--FRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
+ + RK L+ ++ S +++T+ +R M A
Sbjct: 567 AVERIARKYLRRPAIVTIGSAG--EAVDTVEQRVEMIA 602
>gi|337752121|ref|YP_004646283.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus KNP414]
gi|336303310|gb|AEI46413.1| DEAD/DEAH box helicase domain protein [Paenibacillus mucilaginosus
KNP414]
Length = 422
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 129/233 (55%), Gaps = 47/233 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L P ++K++ + + +PTPIQ+ IP G+ D+ G A+TG+GKT AF LPI+
Sbjct: 3 FQQLELIPPIIKALAKENYTQPTPIQEQAIPPVL-AGR-DLFGCAQTGTGKTAAFLLPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGINV 292
Q L ++ + P G +R+LI+TPTRELA+Q++D+ K N+
Sbjct: 61 QLLSTQQGR----------------PNGKRVIRSLILTPTRELAIQISDNAKAYGCFTNL 104
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
R IVGG+S QE+LL+ ++++ TPGRL +LM+ G V+L + VLDEADRM
Sbjct: 105 RYGVIVGGVSQRPQEQLLEQGMDILIATPGRLIDLMNQG---FVDLSHVQILVLDEADRM 161
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
++ G +++ II LP+ KRQTL FSAT+
Sbjct: 162 LDMGFIHDMKRIIAKLPV------------------------KRQTLFFSATM 190
>gi|336469774|gb|EGO57936.1| hypothetical protein NEUTE1DRAFT_81992 [Neurospora tetrasperma FGSC
2508]
Length = 830
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 124/242 (51%), Gaps = 49/242 (20%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E ++ E+ L +++ + +GF +PTPIQ IP + GK D++G A TGSGKT AF
Sbjct: 292 EMASFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISL-MGK-DVVGGAVTGSGKTAAFV 349
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAK 288
+PI++RLL Y PK R +I+TPTRELA+Q ++A
Sbjct: 350 VPILERLL-------------------YRPKKVPTTRVVILTPTRELAIQCHAVAVKLAS 390
Query: 289 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
+++ VGG+S + QE L+ RP++V+ TPGR + M V+ T+ VLDE
Sbjct: 391 HTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD--TIEILVLDE 448
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 408
ADRM+E+G EL I+ LP K RQT++FSAT+ S
Sbjct: 449 ADRMLEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSS 484
Query: 409 AD 410
D
Sbjct: 485 VD 486
>gi|238484285|ref|XP_002373381.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|317140428|ref|XP_001818181.2| ATP-dependent RNA helicase drs1 [Aspergillus oryzae RIB40]
gi|91206589|sp|Q2UQI6.2|DRS1_ASPOR RecName: Full=ATP-dependent RNA helicase drs1
gi|220701431|gb|EED57769.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|391871961|gb|EIT81110.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 820
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 131/258 (50%), Gaps = 54/258 (20%)
Query: 158 AEEELVSE---AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
A EE SE AE+S + ++ E L +++ + + F PTPIQ+ IP A GK D
Sbjct: 286 APEEQTSEQSAAELSKK--SFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALL-GK-D 341
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPT 272
I+G+A TGSGKT AF +PI++RLL + P+ R I+ PT
Sbjct: 342 IVGSAVTGSGKTAAFVVPILERLL-------------------FRPRKVPTSRVAILMPT 382
Query: 273 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 332
RELA+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M
Sbjct: 383 RELAVQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSA 442
Query: 333 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 392
V+ TL VLDEADRM+E+G EL I+ +P
Sbjct: 443 SFTVD--TLEILVLDEADRMLEDGFADELNEILTTIP----------------------- 477
Query: 393 RKKRQTLVFSATIALSAD 410
K RQT++FSAT+ S D
Sbjct: 478 -KSRQTMLFSATMTDSVD 494
>gi|339007892|ref|ZP_08640466.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
gi|338775095|gb|EGP34624.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
Length = 506
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 126/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NEL L P +++SI +GF+E TPIQ IP A G+ D+IG A+TG+GKT+AFG+P++
Sbjct: 4 FNELGLSPSVLRSISNMGFEEATPIQALTIPVAL-TGR-DLIGQAQTGTGKTVAFGIPMI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ H++ +++ PTRELA+QV++ L ++ + ++
Sbjct: 62 EKI--------------------DTSSNHIQGIVLAPTRELAVQVSEELIKLGQYTGIKT 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK P ++V TPGRL + ++ + + L + VLDEAD M+
Sbjct: 102 LPIYGGQDIMRQIRALKKNPHVIVATPGRLIDHIN---RRTIRLQNIQTLVLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G E++SI++ +P +RQTL+FSAT+
Sbjct: 159 MGFIEEIESILEQIP------------------------DERQTLLFSATM 185
>gi|367006707|ref|XP_003688084.1| hypothetical protein TPHA_0M00750 [Tetrapisispora phaffii CBS 4417]
gi|357526391|emb|CCE65650.1| hypothetical protein TPHA_0M00750 [Tetrapisispora phaffii CBS 4417]
Length = 762
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 151/286 (52%), Gaps = 45/286 (15%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 250
L F +PT IQ IP A +G+ DI+G A TGSGKTLA+G+PI++ LL
Sbjct: 205 LAFTKPTEIQMKAIPHAL-KGE-DIMGKASTGSGKTLAYGIPILENLL------------ 250
Query: 251 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQ 306
+ + + P ALI TPTRELA QVT HL++++K I ++ + GG+S +KQ
Sbjct: 251 RTAKVDANKP----IALIFTPTRELAQQVTQHLQKISKLIIEKNPYSILSLTGGLSIQKQ 306
Query: 307 ERLLKARPE--LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 364
+RLLK + +VV TPGR EL+ + + VLDEADR++++GHF E ++I
Sbjct: 307 QRLLKYKGSGRVVVATPGRFLELLEKDNTLIDRFAKIDTLVLDEADRLLQDGHFDEFENI 366
Query: 365 IDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSL---K 421
+ L N EG + K QT++FSAT S D KL + K
Sbjct: 367 LKHLNNANKKMEGTA---------------KWQTMIFSAT--FSIDLFDKLASSNWKNKK 409
Query: 422 LKQSVNGLNSI-ETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 466
L ++ + +N + + L + ++ I+D ++ +++E+ IE
Sbjct: 410 LDENESEMNVVLKHLMNKIQFKSKPVIIDTNPEQKVSEQVKEALIE 455
>gi|196250549|ref|ZP_03149239.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. G11MC16]
gi|196209898|gb|EDY04667.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. G11MC16]
Length = 467
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 127/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L +MK+I R+GF+E TPIQ IP + Q K D+IG A+TG+GKT AFG+PI+
Sbjct: 4 FQELGLSKEVMKAIERMGFEETTPIQAKTIPLSL-QNK-DVIGQAQTGTGKTAAFGIPIV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ G ++AL++ PTRELA+QV++ L ++ VRV
Sbjct: 62 EKV--------------------DVKNGAIQALVVAPTRELAIQVSEELYKIGAVKRVRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG E+Q R LK P ++VGTPGR+ + ++ G L + T+ VLDEAD M+
Sbjct: 102 LPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVRTV---VLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P +RQTL+FSAT+
Sbjct: 159 MGFIEDIEAILRHVP------------------------TERQTLLFSATM 185
>gi|300772766|ref|ZP_07082636.1| ATP-dependent RNA helicase RhlE [Sphingobacterium spiritivorum ATCC
33861]
gi|300761069|gb|EFK57895.1| ATP-dependent RNA helicase RhlE [Sphingobacterium spiritivorum ATCC
33861]
Length = 435
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 126/231 (54%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L ++K++ G++ PTPIQ+ IP + D++ A+TG+GKT AF +PI+
Sbjct: 20 FKDLKLIAPILKALDASGYQNPTPIQEQAIPIIFQRK--DLLACAQTGTGKTAAFAIPIL 77
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L +EK + +R L++TPTRELA+Q+ ++ +K + +R
Sbjct: 78 QMLTYSKEKTAQ---------------KRIRTLVLTPTRELAIQIKENFDAYSKELPIRN 122
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG+ + Q L+ ++++ TPGRL +L + G ++L L +FVLDEADRM++
Sbjct: 123 LVIYGGVGQQPQRDALRKGIDILIATPGRLLDLYNQG---FIDLKQLEYFVLDEADRMLD 179
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ +I ++P KKRQTL+FSAT+
Sbjct: 180 MGFIHDVKKVISIIP------------------------KKRQTLLFSATM 206
>gi|116626579|ref|YP_828735.1| DEAD/DEAH box helicase [Candidatus Solibacter usitatus Ellin6076]
gi|116229741|gb|ABJ88450.1| DEAD/DEAH box helicase domain protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 422
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 124/232 (53%), Gaps = 49/232 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACI-PAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++EL L L ++ + F EPTPIQ I PA A GK DI+ A+TG+GKTLAF LP
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALA--GK-DIVATAQTGTGKTLAFLLPT 60
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q L E + G +RALI+TPTRELALQ+ + L ++A+G +R
Sbjct: 61 IQLLSTEPRQPG------------------VRALILTPTRELALQINEALLQIARGTGIR 102
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VGG++ Q R ++ +VV TPGRL++ MS G L+ L T+ +LDE+DRM+
Sbjct: 103 AAVAVGGLNERSQLRDIRGGANIVVATPGRLYDFMSRG---LINLTTVRMLILDESDRML 159
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G ++ II +P +RQTL+FSAT+
Sbjct: 160 DMGFLPTIKRIIAAMP------------------------AERQTLLFSATL 187
>gi|242801276|ref|XP_002483729.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218717074|gb|EED16495.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 803
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 147/269 (54%), Gaps = 21/269 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E L L+ + ++G+ +PTPIQ+A IP A D+IG A TGSGKT +F LP+
Sbjct: 364 SWEESGLPRRLLDLVKQVGYTDPTPIQRAAIPIALQSR--DLIGVAVTGSGKTASFLLPL 421
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ E + +E E G A+I+ PTRELA Q+ K+ +K +N
Sbjct: 422 FVYISEL---------PRLDEFEWRKNDGPY-AIILAPTRELAQQIEIEAKKFSKPLNFN 471
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI
Sbjct: 472 VVSIVGGHSLEEQAYSLRDGAEIIIATPGRLVDCL---ERRMLVLSQCCYVIMDEADRMI 528
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSATI--ALSA 409
+ G + I+D LP+TN + + + ++ V R+ RQT++++AT+ A+
Sbjct: 529 DLGFEEPVNKILDALPVTNEKPDTEEAEDAQAMSQHVGGRDRRYRQTMMYTATMPSAVER 588
Query: 410 DFRKKLKHGSLKLKQSVNGLNSIETLSER 438
RK L+ ++ +V +++T+ +R
Sbjct: 589 IARKYLRRPAIVTIGNVG--QAVDTVEQR 615
>gi|313900312|ref|ZP_07833806.1| ATP-dependent RNA helicase RhlE [Clostridium sp. HGF2]
gi|312954861|gb|EFR36535.1| ATP-dependent RNA helicase RhlE [Clostridium sp. HGF2]
Length = 437
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 127/231 (54%), Gaps = 48/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ L + ++K++ G+ +PTPIQ+ IP A QG+ DI+G A+TG+GKT AF +P +
Sbjct: 3 FQTLHITEPILKAVKEQGYVDPTPIQEQAIPYAL-QGR-DILGCAQTGTGKTAAFSIPTI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L K K +R+LI+TPTRELA+Q+ +++ A+ +R
Sbjct: 61 QLL-------------------KKHYKQSIRSLIVTPTRELAIQIQENITAYAQYTTIRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ + QER+LKA +++V TPGRL +L+ G ++++ + F+LDEADRM++
Sbjct: 102 AVIFGGVPQKPQERILKAGVDILVATPGRLNDLIQQG---IIDISHIEIFILDEADRMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II LP K++QTL FSAT+
Sbjct: 159 MGFLPDVKRIIAKLP------------------------KRKQTLFFSATM 185
>gi|428172478|gb|EKX41387.1| hypothetical protein GUITHDRAFT_96054 [Guillardia theta CCMP2712]
Length = 654
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 138/251 (54%), Gaps = 28/251 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L P ++++I +K P+PIQ CIP D++G A+TGSGKT AF LP++
Sbjct: 224 WEESGLPPEILEAIKEKKYKIPSPIQMQCIPLGLLNR--DVVGIAQTGSGKTAAFVLPML 281
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ ++ + AP+G L ALI+ PTRELA Q+ D K +N+R
Sbjct: 282 -----------VYISKQPPITQDTAPEGPL-ALILAPTRELANQIYDEAITFCKFMNIRC 329
Query: 295 VPIVGG---MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
P+VGG S E+Q ++ E++V TPGRL + + E+ LV L+ ++ VLDEADR
Sbjct: 330 FPLVGGGGVKSIEEQGFTVRQGVEILVATPGRLIDCL---ERRLVVLNQCNYVVLDEADR 386
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSA 409
MI+ G ++Q+I+D +P +N E + + + + + RQT +FSAT+ A+
Sbjct: 387 MIDMGFEPQVQAILDAMPSSNLKPEDDAAEE------GNQEFRYRQTFMFSATMPPAIER 440
Query: 410 DFRKKLKHGSL 420
RK L+ +
Sbjct: 441 ITRKYLRRPAF 451
>gi|404406153|ref|ZP_10997737.1| DNA/RNA helicase [Alistipes sp. JC136]
Length = 541
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 139/265 (52%), Gaps = 46/265 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L L+++I G+ +PTPIQ+ IP +G+ D+ G A+TG+GKT AF LPI+
Sbjct: 3 FQDLGLSEPLLRAIGEKGYTDPTPIQQQAIPPVL-EGR-DLQGCAQTGTGKTAAFTLPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L E G+ +RAL+ITPTRELA+Q+ + ++ A+ +++R
Sbjct: 61 QLLAAEPAARGRR---------------EIRALVITPTRELAIQIDECCRDYARYLSIRH 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG++ Q L+ +L+V TPGRL +L+ G + L + FFVLDEADRM++
Sbjct: 106 CVIFGGVNQRPQVDALQRGVDLLVATPGRLLDLIGQG---YISLDKIRFFVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS-ADFRK 413
G +++ I+ +LP +RQTL FSAT+ A
Sbjct: 163 MGFIHDIRRILPLLPA------------------------QRQTLFFSATMPPDIAQLAA 198
Query: 414 KLKHGSLKLKQSVNGLNSIETLSER 438
K+ H + L + +ET+S+R
Sbjct: 199 KILHDPV-LVTVTPPASVVETISQR 222
>gi|169598332|ref|XP_001792589.1| hypothetical protein SNOG_01967 [Phaeosphaeria nodorum SN15]
gi|118595361|sp|Q0V1Z7.1|DRS1_PHANO RecName: Full=ATP-dependent RNA helicase DRS1
gi|111069059|gb|EAT90179.1| hypothetical protein SNOG_01967 [Phaeosphaeria nodorum SN15]
Length = 808
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 120/239 (50%), Gaps = 49/239 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ + L + K + +GF EPTPIQ IP A QGK D++G AETGSGKT AF +PI
Sbjct: 286 SFHAMSLSRPIQKGLAAIGFTEPTPIQAKAIPIAM-QGK-DVVGGAETGSGKTAAFLIPI 343
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGIN 291
++RLL Y PK R I PTRELA+Q + ++A +
Sbjct: 344 LERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTD 384
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ + GG S+ +QE +LK RP++V+ TPGR + M VE L VLDEADR
Sbjct: 385 ITFALLAGGFSSREQEVMLKTRPDVVIATPGRFIDHMHNTAAFQVE--HLEILVLDEADR 442
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
M+E G +L I+ +P K RQT++FSAT+ + D
Sbjct: 443 MLEEGFETQLNEILTTIP------------------------KSRQTMLFSATMTSTVD 477
>gi|346317243|ref|ZP_08858729.1| hypothetical protein HMPREF9022_04386 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345900333|gb|EGX70155.1| hypothetical protein HMPREF9022_04386 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 437
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 129/231 (55%), Gaps = 48/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ L + ++K++ G+ +PTPIQ+ IP A QG+ DI+G A+TG+GKT AF +P +
Sbjct: 3 FQTLHITEPILKAVKEQGYVDPTPIQEQAIPYAL-QGR-DILGCAQTGTGKTAAFSIPTI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q LL++ K +R+LI+TPTRELA+Q+ +++ A+ +R
Sbjct: 61 Q-LLKKHYKQS------------------IRSLIVTPTRELAIQIQENITAYAQYTTIRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ + QER+LKA +++V TPGRL +L+ G ++++ + F+LDEADRM++
Sbjct: 102 AVIFGGVPQKPQERILKAGVDILVATPGRLNDLIQQG---IIDISHIEIFILDEADRMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II LP K++QTL FSAT+
Sbjct: 159 MGFLPDVKRIIAKLP------------------------KRKQTLFFSATM 185
>gi|425769163|gb|EKV07664.1| DEAD/DEAH box helicase, putative [Penicillium digitatum Pd1]
gi|425770721|gb|EKV09185.1| DEAD/DEAH box helicase, putative [Penicillium digitatum PHI26]
Length = 772
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 150/271 (55%), Gaps = 25/271 (9%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E L L++ + R+G+K+PT IQ+A IP A D+IG A TGSGKT AF LP+
Sbjct: 340 SWEESHLPKRLLELVDRVGYKDPTAIQRAAIPIAMQS--RDLIGVAVTGSGKTAAFLLPL 397
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + A L+E E + P A+++ PTRELA Q+ K+ + +
Sbjct: 398 LVYI-----SALPRLDEN-EWRKNDGPY----AIVLAPTRELAQQIEIEAKKFTQPLGFN 447
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI
Sbjct: 448 VVSIVGGHSLEEQAFSLRDGAEIIIATPGRLVDCI---ERRMLVLSQCCYVIMDEADRMI 504
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSADF 411
+ G + I+D LP+TN + + T ++ Q K RQT++++AT+ A+
Sbjct: 505 DLGFEEPVNKILDALPVTNEKPDTDEAENSTAMS----QHKYRQTMMYTATMPAAVERIA 560
Query: 412 RKKLKHGSLKLKQSVNGLN-SIETLSERAGM 441
RK L+ ++ ++ G+ +++T+ +R M
Sbjct: 561 RKYLRRPAII---TIGGVGEAVDTVEQRVEM 588
>gi|350290558|gb|EGZ71772.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 865
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 124/242 (51%), Gaps = 49/242 (20%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E ++ E+ L +++ + +GF +PTPIQ IP + GK D++G A TGSGKT AF
Sbjct: 292 EMASFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISL-MGK-DVVGGAVTGSGKTAAFV 349
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAK 288
+PI++RLL Y PK R +I+TPTRELA+Q ++A
Sbjct: 350 VPILERLL-------------------YRPKKVPTTRVVILTPTRELAIQCHAVAVKLAS 390
Query: 289 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
+++ VGG+S + QE L+ RP++V+ TPGR + M V+ T+ VLDE
Sbjct: 391 HTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD--TIEILVLDE 448
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 408
ADRM+E+G EL I+ LP K RQT++FSAT+ S
Sbjct: 449 ADRMLEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSS 484
Query: 409 AD 410
D
Sbjct: 485 VD 486
>gi|315043240|ref|XP_003170996.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
gi|311344785|gb|EFR03988.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
Length = 814
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 130/256 (50%), Gaps = 50/256 (19%)
Query: 158 AEEELVSEAEISTEFDA-WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
A EE V+E + ++ A + L L +++ + +GF PTPIQK IP A GK D++
Sbjct: 283 APEEQVAEPKSASGAPASFQNLSLSRPILRGLASVGFSAPTPIQKKTIPVALL-GK-DVV 340
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRE 274
G A TGSGKT AF +PI++RLL Y P+ R I+ PTRE
Sbjct: 341 GGAVTGSGKTGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTRE 381
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M
Sbjct: 382 LAVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASF 441
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 394
V+ TL VLDEADRM+E+G EL I+ +P K
Sbjct: 442 TVD--TLEILVLDEADRMLEDGFAEELNEILTTIP------------------------K 475
Query: 395 KRQTLVFSATIALSAD 410
RQT++FSAT+ S D
Sbjct: 476 SRQTMLFSATMTNSVD 491
>gi|395334307|gb|EJF66683.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 773
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 127/245 (51%), Gaps = 46/245 (18%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGK 225
+E T F + N L ++KS+ LGF PTPIQ A IP A GK D++G A TGSGK
Sbjct: 183 SEAHTSFLSMN---LSRPIIKSLTTLGFTTPTPIQAATIPVAL-LGK-DVVGNAVTGSGK 237
Query: 226 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
T AF +P+++RL M ++G++A R L++ PTREL +Q + +
Sbjct: 238 TAAFIIPMLERL---------MYRDRGKKA------AATRCLVLVPTRELGVQCFEVGTK 282
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+A ++R +VGG+S + QE L+ RP++V+ TPGRL + + L L V
Sbjct: 283 LAAHTDIRFALVVGGLSIKAQEANLRTRPDVVIATPGRLIDHIRNSP--TFTLDALDILV 340
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
LDEADRM+E+G EL II P + RQT++FSAT+
Sbjct: 341 LDEADRMLEDGFADELTEIIKSCPTS------------------------RQTMLFSATM 376
Query: 406 ALSAD 410
S D
Sbjct: 377 TDSVD 381
>gi|410900007|ref|XP_003963488.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Takifugu
rubripes]
Length = 802
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 131/233 (56%), Gaps = 18/233 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 374 WKEYSLPDHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFLIPLL 431
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K ++ E P A+I+ PTRELA Q+ + + K + +R
Sbjct: 432 V-WITTLPKIDRI------EDSDQGPY----AVILAPTRELAQQIEEETIKFGKPLGIRT 480
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 481 VAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLDN--RYLV-LSRCTYVVLDEADRMID 537
Query: 355 NGHFRELQSIIDMLPMTNG--SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++Q I++ +P+TN E + + + S + K RQT++F+AT+
Sbjct: 538 MGFEPDVQKILEFIPVTNQKPDTEEAEDPDKMMMNFESGKNKYRQTVMFTATM 590
>gi|294658755|ref|XP_461087.2| DEHA2F16720p [Debaryomyces hansenii CBS767]
gi|218512019|sp|Q6BL34.2|DBP10_DEBHA RecName: Full=ATP-dependent RNA helicase DBP10
gi|202953360|emb|CAG89469.2| DEHA2F16720p [Debaryomyces hansenii CBS767]
Length = 932
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 160/322 (49%), Gaps = 68/322 (21%)
Query: 107 DGDGDEDGNGVQKE--QEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVS 164
+ D + D VQ E +++ K KK+K +KGK +T S+ +S+ D+AE E
Sbjct: 23 ESDLNSDNEEVQDEIVSDEDDTKHKPNKKQKLEKGKSKQTFP-SLELSD--DEAENE--- 76
Query: 165 EAEISTEFDAWN------------ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
++++ F A N L+ +I + GFK+PTPIQ+ IP
Sbjct: 77 SKDMASYFVANNPQAKKAKNGSFPSFGFSKFLLTNISKKGFKQPTPIQRKTIPLIMENR- 135
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
D++G A TGSGKT AF LP++++L + ++P+ +RA+I++P+
Sbjct: 136 -DVVGMARTGSGKTAAFTLPLVEKL------------------KSHSPRVGVRAIILSPS 176
Query: 273 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 332
RELA Q +KE +KG ++R + ++GG S E+Q + P+++V TPGR L E
Sbjct: 177 RELASQTFKQVKEFSKGTDLRSIVLIGGDSLEEQFSSMMTNPDVIVATPGRFLHLKVEME 236
Query: 333 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 392
+EL T+ + V DEADR+ E G +L +I LP +
Sbjct: 237 ---LELKTVEYIVFDEADRLFEMGFAEQLNELIAALPSS--------------------- 272
Query: 393 RKKRQTLVFSATIALS-ADFRK 413
RQ+L+FSAT+ S DF K
Sbjct: 273 ---RQSLLFSATLPRSLIDFAK 291
>gi|389584149|dbj|GAB66882.1| pre-mRNA splicing factor RNA helicase PRP28 [Plasmodium cynomolgi
strain B]
Length = 1104
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 124/231 (53%), Gaps = 17/231 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L L+K+I + +++PTPIQ IP A D+IG AETGSGKT AF LP++
Sbjct: 678 WEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEM--RDLIGIAETGSGKTAAFVLPML 735
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K L E + P ALII P+RELA+Q+ D + A + R
Sbjct: 736 AYV--------KQLPPLTYETSQDGP----YALIIAPSRELAIQIFDETNKFASYCSCRT 783
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG + E Q L+ E+++GTPGR+ + + EK L+ ++ +LDEADRM++
Sbjct: 784 VAVVGGRNAEAQAFELRKGVEIIIGTPGRIQDCL---EKAYTVLNQCNYVILDEADRMMD 840
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G + I+D +P +N +E + Q + + R R T +FSAT+
Sbjct: 841 MGFEDSVHFILDKIPTSNLKSEDDALALQEEMMAKAGHRLYRLTQMFSATM 891
>gi|452209335|ref|YP_007489449.1| Cold-shock DEAD-box protein A [Methanosarcina mazei Tuc01]
gi|452099237|gb|AGF96177.1| Cold-shock DEAD-box protein A [Methanosarcina mazei Tuc01]
Length = 610
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 117/191 (61%), Gaps = 24/191 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ L L +K++ + GF+EPTPIQ+ IP +G+ DIIG A+TG+GKT AFG PI+
Sbjct: 7 FKALGLSDSTLKALKKKGFEEPTPIQEKVIPLFL-KGEADIIGQAQTGTGKTTAFGAPII 65
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ E+ GH++A+I+TPTRELA+QV++ L + + +
Sbjct: 66 EKIPEK--------------------SGHVQAIILTPTRELAIQVSEELNSIKGDKKLYI 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
VPI GG S +Q R+LK+ ++VVGTPGR+ + + E+ + L +++FVLDEAD M+
Sbjct: 106 VPIYGGQSMTQQLRVLKSGVDIVVGTPGRVIDHL---ERKSLNLEHIAYFVLDEADEMLN 162
Query: 355 NGHFRELQSII 365
G +++ I+
Sbjct: 163 MGFIDDIKEIL 173
>gi|212712156|ref|ZP_03320284.1| hypothetical protein PROVALCAL_03238 [Providencia alcalifaciens DSM
30120]
gi|422018909|ref|ZP_16365460.1| ATP-dependent RNA helicase with P-loop hydrolase domain
[Providencia alcalifaciens Dmel2]
gi|212685203|gb|EEB44731.1| hypothetical protein PROVALCAL_03238 [Providencia alcalifaciens DSM
30120]
gi|414104095|gb|EKT65667.1| ATP-dependent RNA helicase with P-loop hydrolase domain
[Providencia alcalifaciens Dmel2]
Length = 477
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 133/237 (56%), Gaps = 52/237 (21%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++++L L+ ++++I LG++ PTPIQ+ IPA GK D++ +A+TG+GKT F LPI
Sbjct: 31 SFSDLALNEEILRAINELGYESPTPIQQQAIPAVL-AGK-DLLASAQTGTGKTAGFTLPI 88
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGH----LRALIITPTRELALQVTDHLKEVAKG 289
+Q+L++ P+G+ +RALI+TPTRELA QV +++KE ++
Sbjct: 89 LQKLVDN-------------------PRGNNRRPIRALILTPTRELAAQVAENVKEYSRH 129
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
+ +R + GG+S Q L+ ++++ TPGRL +L ++ V+L + FVLDEA
Sbjct: 130 LKIRSFVVFGGVSINPQMMKLRGGVDVLIATPGRLLDL---EHQNAVDLSQVEVFVLDEA 186
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
DRM++ G +++ +I LP KKRQ L+FSAT +
Sbjct: 187 DRMLDMGFIHDIRRVITKLP------------------------KKRQNLLFSATFS 219
>gi|452986589|gb|EME86345.1| hypothetical protein MYCFIDRAFT_202484 [Pseudocercospora fijiensis
CIRAD86]
Length = 756
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 128/255 (50%), Gaps = 52/255 (20%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIG 217
A EE S +T F + N L ++K + +GF +PTPIQ IP A +GK D++G
Sbjct: 222 AAEETKSAKATATAFHSMN---LSRQILKGLAAVGFDKPTPIQAKTIPVAL-EGK-DLVG 276
Query: 218 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTREL 275
A TGSGKT AF +PI++RLL Y P+ R I+ PTREL
Sbjct: 277 GAVTGSGKTAAFLIPILERLL-------------------YRPRNAATTRVAILMPTREL 317
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
ALQ + K++A ++ +GG+++ +QE+ LK RP++V+ TPGR +L
Sbjct: 318 ALQCFNVAKKLAAHTDITFGQAIGGLNSREQEKQLKLRPDIVIATPGRFIDLERNSASFA 377
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
V +T+ VLDEADRM+E G EL I+ +P K
Sbjct: 378 V--NTIEILVLDEADRMLEEGFADELNEILTKIP------------------------KS 411
Query: 396 RQTLVFSATIALSAD 410
RQT++FSAT+ D
Sbjct: 412 RQTMLFSATMTSKVD 426
>gi|110680325|ref|YP_683332.1| ATP-dependent RNA helicase [Roseobacter denitrificans OCh 114]
gi|109456441|gb|ABG32646.1| putative ATP-dependent RNA helicase, putative [Roseobacter
denitrificans OCh 114]
Length = 433
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 131/236 (55%), Gaps = 47/236 (19%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
++F+ N L P L+ + R+G K+PTPIQK IP A + G+ D++G A+TG+GKT AF
Sbjct: 2 SDFEMMN---LPPELVARLGRMGLKDPTPIQKQAIPHAMN-GR-DVMGLAQTGTGKTAAF 56
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 289
G+P++ +MLE G A K +R L++ PTRELA Q++ +L+ A+
Sbjct: 57 GVPLV----------AQMLELDGRPAPK-----SVRGLVLAPTRELATQISVNLRSFAEN 101
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
V+V +VGG S Q + L+ +L+V TPGRL +LM ++ V L F VLDEA
Sbjct: 102 TKVKVAMVVGGQSINNQIKRLERGVDLLVATPGRLLDLM---DRRAVRLDEAVFLVLDEA 158
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
D+M++ G +L+ I ++P K+RQT++FSAT+
Sbjct: 159 DQMLDMGFIHDLRKIASVIP------------------------KERQTMLFSATM 190
>gi|335356475|ref|ZP_08548345.1| ATP-dependent RNA helicase [Lactobacillus animalis KCTC 3501]
Length = 503
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 126/232 (54%), Gaps = 51/232 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L L+K++ R GF+E TPIQ+A IP GK D+IG A+TG+GKT AFGLPI+
Sbjct: 3 FDELGLSEDLLKAVKRSGFEEATPIQEATIPLVL-AGK-DVIGQAQTGTGKTAAFGLPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
E PK H ++A+II+PTRELA+Q + L + K R
Sbjct: 61 ---------------------EHVDPKEHAIQAIIISPTRELAIQTQEELYRLGKDKRAR 99
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V + GG +Q +LLK P+++VGTPGRL + ++ + V+L + VLDEAD M+
Sbjct: 100 VQVVYGGADIRRQIKLLKNPPQILVGTPGRLLDHIN---RKTVDLSKVKMLVLDEADEML 156
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G +++ II +P GQ RQTL+FSAT+
Sbjct: 157 DMGFLDDIEKIISNVP-------GQ-----------------RQTLLFSATM 184
>gi|373124645|ref|ZP_09538486.1| hypothetical protein HMPREF0982_03415 [Erysipelotrichaceae
bacterium 21_3]
gi|422328761|ref|ZP_16409787.1| hypothetical protein HMPREF0981_03107 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371659039|gb|EHO24308.1| hypothetical protein HMPREF0981_03107 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371659613|gb|EHO24878.1| hypothetical protein HMPREF0982_03415 [Erysipelotrichaceae
bacterium 21_3]
Length = 437
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 127/231 (54%), Gaps = 48/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ L + ++K++ G+ +PTPIQ+ IP A QG+ DI+G A+TG+GKT AF +P +
Sbjct: 3 FQTLHITEPILKAVKEQGYVDPTPIQEQAIPYAL-QGR-DILGCAQTGTGKTAAFSIPTI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L K K +R+LI+TPTRELA+Q+ +++ A+ +R
Sbjct: 61 QLL-------------------KKHYKQSIRSLIVTPTRELAIQIQENITAYAQYTTIRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ + QER+LKA +++V TPGRL +L+ G ++++ + F+LDEADRM++
Sbjct: 102 AVIFGGVPQKPQERILKAGVDILVATPGRLNDLIQQG---IIDISHIEIFILDEADRMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II LP K++QTL FSAT+
Sbjct: 159 MGFLPDVKRIIAKLP------------------------KRKQTLFFSATM 185
>gi|119186507|ref|XP_001243860.1| hypothetical protein CIMG_03301 [Coccidioides immitis RS]
gi|118595360|sp|Q1E2B2.1|DRS1_COCIM RecName: Full=ATP-dependent RNA helicase DRS1
gi|392870577|gb|EAS32387.2| ATP-dependent RNA helicase DRS1 [Coccidioides immitis RS]
Length = 840
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 128/255 (50%), Gaps = 49/255 (19%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIG 217
A EE +++E ++ + L +++ + +GF PTPIQ+ IP GK D++G
Sbjct: 304 APEENPTKSEETSSNSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPVGL-LGK-DLVG 361
Query: 218 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTREL 275
A TGSGKT AF +PI++RLL Y P+ R I+ PTREL
Sbjct: 362 GAVTGSGKTAAFIIPILERLL-------------------YRPRKVPTSRVAILMPTREL 402
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
A+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M
Sbjct: 403 AVQCYNVATKLATYTDITFCQLVGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFT 462
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
V+ TL VLDEADRM+E+G EL I++ +P K
Sbjct: 463 VD--TLEILVLDEADRMLEDGFADELNEILNTIP------------------------KS 496
Query: 396 RQTLVFSATIALSAD 410
RQT++FSAT+ S D
Sbjct: 497 RQTMLFSATMTDSVD 511
>gi|421861510|ref|ZP_16293512.1| DNA and RNA helicase [Paenibacillus popilliae ATCC 14706]
gi|410828936|dbj|GAC43949.1| DNA and RNA helicase [Paenibacillus popilliae ATCC 14706]
Length = 517
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 54/255 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L+++I LGF+E TPIQ+ IP A G+ D+IG A+TG+GKT AFG+P++
Sbjct: 7 FVELGLEPKLLQAITELGFEEATPIQEIAIPVAM-MGR-DLIGQAQTGTGKTAAFGIPLI 64
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ E+ + AL++TPTRELA+QV + + ++ + VR
Sbjct: 65 SKIDPSEER--------------------VVALVMTPTRELAIQVAEEIGKLTRFKGVRS 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK P++++GTPGRL + ++ + + L+ + VLDEAD M++
Sbjct: 105 LPIYGGQDIGRQIRALKKHPQIIIGTPGRLLDHIN---RKTIRLNDVQTVVLDEADEMLD 161
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++ SI+ ++P ++RQT++FSAT+ L+
Sbjct: 162 MGFMEDITSILSLVP------------------------EERQTMLFSATMPPNIQKLAN 197
Query: 410 DFRKKLKHGSLKLKQ 424
F + +H S+ KQ
Sbjct: 198 QFLRDPEHVSVIPKQ 212
>gi|320589197|gb|EFX01659.1| dead deah box DNA helicase [Grosmannia clavigera kw1407]
Length = 734
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 127/232 (54%), Gaps = 18/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L P L+ + +G+ EPTPIQ+A IP A QG+ D+IG A TGSGKT AF LP++
Sbjct: 305 WRESPLPPRLLDVVEAVGYTEPTPIQRAAIPIAL-QGR-DLIGVAVTGSGKTAAFLLPLL 362
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ E L E ++ P ALI+ PTRELA Q+ ++ A V
Sbjct: 363 VYIKE--------LPPLDEISKNDGPY----ALILAPTRELAQQIESEARKFATPFGYTV 410
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V IVGG S E+Q L+ E+VV TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 411 VSIVGGHSLEEQAYALRNGAEIVVATPGRLVDCI---ERRLLVLSQCCYVIMDEADRMID 467
Query: 355 NGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G L I+D +P N + ++E + + + R+T++++AT+
Sbjct: 468 LGFEDPLNKILDAMPTANEKPDTDEAEDARAMTQYLGGKIRYRETMMYTATM 519
>gi|114567412|ref|YP_754566.1| ATP-dependent RNA helicase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114338347|gb|ABI69195.1| ATP-dependent RNA helicase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 530
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 128/234 (54%), Gaps = 50/234 (21%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
F+ + + L L++ I GF++PTPIQ IP A +D++G A+TG+GKT +FG+
Sbjct: 3 FENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIA--MAGLDLMGQAQTGTGKTASFGI 60
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
PI+ R++ KGE L+AL++ PTRELA+QVT+ + +++ +
Sbjct: 61 PILNRVI------------KGE---------GLQALVLCPTRELAVQVTEEISSLSRRMR 99
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
++V+ I GG S E Q R L+ PE++VGTPGRL + M+ G + L L + VLDEAD
Sbjct: 100 IQVLAIYGGQSIELQLRSLRRNPEIIVGTPGRLMDHMNRGT---ISLSPLKYVVLDEADE 156
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G ++Q I+ P ++RQT +FSAT+
Sbjct: 157 MLDMGFLPDIQKILSQCP------------------------RERQTFLFSATL 186
>gi|315648503|ref|ZP_07901602.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
gi|315276197|gb|EFU39543.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
Length = 536
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 139/251 (55%), Gaps = 54/251 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P ++++I LGF+E TPIQ IP A G+ D+IG A+TG+GKT AFGLP++
Sbjct: 4 FADFGLEPRVLQAITELGFEEATPIQSQSIPIAL-TGR-DMIGQAQTGTGKTAAFGLPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ +E E+ + +LI+TPTRELA+QV + + ++++ +R
Sbjct: 62 HKIAKEEER--------------------IVSLIMTPTRELAIQVAEEIGKLSRFKGIRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG +Q R LK +P++++GTPGRL + ++ + + L + VLDEAD M++
Sbjct: 102 LAIYGGQDIGRQIRALKKKPQIIIGTPGRLLDHIN---RKTIRLDDVQTVVLDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++QSI+ ++P ++RQTL+FSAT+ L++
Sbjct: 159 MGFMEDIQSILKLVP------------------------EERQTLLFSATMPANIQKLAS 194
Query: 410 DFRKKLKHGSL 420
F K +H S+
Sbjct: 195 QFLKDPEHVSV 205
>gi|261415437|ref|YP_003249120.1| DEAD/DEAH box helicase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371893|gb|ACX74638.1| DEAD/DEAH box helicase domain protein [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 486
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 130/231 (56%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L L +++ +G++ PTPIQ+ IP+ +GK D++G A+TG+GKT AF LPI+
Sbjct: 3 FEELPLANPLQRAVRAVGYETPTPIQERSIPSLL-EGK-DLLGIAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRLL+ +GK +PK RALI+ PTRELA+QV D +E A+ +
Sbjct: 61 QRLLD----SGKF----------RSPKT-CRALILLPTRELAIQVEDCFREYAQFTAIST 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG++ Q++ L +++V TPGRL +L+ G+K + L L FFVLDEADRM++
Sbjct: 106 ACIFGGVNDNPQKQKLIRGVDVLVATPGRLLDLI--GQK-AISLKKLEFFVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ ++ MLP + RQ L FSAT+
Sbjct: 163 MGFIHDIRKVVAMLP------------------------QDRQNLFFSATM 189
>gi|452990332|emb|CCQ98554.1| putative ATP-dependent RNA helicase [Clostridium ultunense Esp]
Length = 535
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 128/238 (53%), Gaps = 50/238 (21%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
++ ++ E ++ ++K+I +GF+EP+PIQ ACIP D+IG A+TG+GKT
Sbjct: 8 VTNSMSSFQEFKIDQAILKAIQEMGFEEPSPIQSACIPKILE--GFDVIGQAQTGTGKTA 65
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AFG+PI+ EK ++AL++TPTRELA+Q++ L++++
Sbjct: 66 AFGIPIV---------------------EKVTSSPEVQALVLTPTRELAIQISGELRKIS 104
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K ++ +PI GG S Q R LK ++V+GTPGR+ + ++ + ++L + VLD
Sbjct: 105 KFKRIKTLPIYGGQSIGHQIRALKQGVQVVIGTPGRIIDHLN---RKTLKLDHVRIVVLD 161
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EAD M++ G +++SI+ +P RQTL+FSAT+
Sbjct: 162 EADEMLDMGFIDDIESILRSVP------------------------ADRQTLLFSATM 195
>gi|451852848|gb|EMD66142.1| hypothetical protein COCSADRAFT_179496 [Cochliobolus sativus
ND90Pr]
Length = 814
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 120/237 (50%), Gaps = 45/237 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ + L +++ + +GF EPTPIQ +P A QGK D++G AETGSGKT AF +PI
Sbjct: 289 SFQAMSLSRPILRGLASVGFTEPTPIQSKAVPIAM-QGK-DVVGGAETGSGKTAAFLIPI 346
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
++RLL ++K R I PTRELA+Q + ++A ++
Sbjct: 347 LERLLYRQKKIPTT-----------------RVAIFMPTRELAVQCFNVATKLASFTDIT 389
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG S+ +QE +LK RP++V+ TPGR + M VE L VLDEADRM+
Sbjct: 390 FALMAGGFSSREQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--NLEILVLDEADRML 447
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
E G +L I+ +P K RQT++FSAT+ S D
Sbjct: 448 EEGFESQLNEILTTIP------------------------KSRQTMLFSATMTSSVD 480
>gi|195118551|ref|XP_002003800.1| GI21075 [Drosophila mojavensis]
gi|193914375|gb|EDW13242.1| GI21075 [Drosophila mojavensis]
Length = 515
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 141/286 (49%), Gaps = 54/286 (18%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
++ PD++EE +EA + W +L L+ L K+ L +K P+ IQK IP A QG
Sbjct: 41 TSDPDESEE---TEAPKCEQLQTWKDLGLNETLCKACEELKWKAPSKIQKEAIPVAL-QG 96
Query: 212 KVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 271
K DIIG AETGSGKT AF LPI+ LLE P+ + AL++TP
Sbjct: 97 K-DIIGLAETGSGKTGAFALPILHALLEN-------------------PQRYF-ALVLTP 135
Query: 272 TRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 331
TRELA Q+ + + + GI ++ +VGGM Q L +P +++ TPGRL + +
Sbjct: 136 TRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENL 195
Query: 332 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 391
+ L + + V+DEADR++ EL I+ +LP
Sbjct: 196 KG--FNLKAIKYLVMDEADRILNMDFEVELDKILKVLP---------------------- 231
Query: 392 QRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSE 437
++R+T +FSAT+ KKL+ SLK V N +T+ +
Sbjct: 232 --RERRTFLFSATMTKKV---KKLQRASLKDPVKVEVSNKYQTVDQ 272
>gi|320038882|gb|EFW20817.1| ATP-dependent RNA helicase DRS1 [Coccidioides posadasii str.
Silveira]
Length = 840
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 128/255 (50%), Gaps = 49/255 (19%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIG 217
A EE +++E ++ + L +++ + +GF PTPIQ+ IP GK D++G
Sbjct: 304 APEENPTKSEETSSNSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPIGLL-GK-DLVG 361
Query: 218 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTREL 275
A TGSGKT AF +PI++RLL Y P+ R I+ PTREL
Sbjct: 362 GAVTGSGKTAAFIIPILERLL-------------------YRPRKVPTSRVAILMPTREL 402
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
A+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M
Sbjct: 403 AVQCYNVATKLATYTDITFCQLVGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFT 462
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
V+ TL VLDEADRM+E+G EL I++ +P K
Sbjct: 463 VD--TLEILVLDEADRMLEDGFADELNEILNTIP------------------------KS 496
Query: 396 RQTLVFSATIALSAD 410
RQT++FSAT+ S D
Sbjct: 497 RQTMLFSATMTDSVD 511
>gi|261749520|ref|YP_003257206.1| ATP-dependent RNA helicase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497613|gb|ACX84063.1| ATP-dependent RNA helicase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 542
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 124/225 (55%), Gaps = 51/225 (22%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRL-LEERE 242
+++++ LG K PTPIQK IP GK D+I A+TG+GKT AFGLPI+Q++ LE R
Sbjct: 14 IIQALEDLGIKTPTPIQKKVIPYLLKSGK-DLIALAQTGTGKTAAFGLPIIQKINLEFR- 71
Query: 243 KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-VRVVPIVGGM 301
P+ ALI+ PTREL +Q+T L ++ I+ ++++P+ GG+
Sbjct: 72 ----------------FPQ----ALILCPTRELCIQITRDLSRFSRYISLIKIIPLYGGV 111
Query: 302 STEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 361
S E Q L+ R ++VGTPGR+ +L+ + HL + + + VLDEAD M+ G EL
Sbjct: 112 SIENQILSLQKRTHIIVGTPGRIIDLIERKKLHLSD---IKYLVLDEADEMLNMGFKEEL 168
Query: 362 QSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
SII LP KKRQ+L+FSAT++
Sbjct: 169 DSIIIKLP------------------------KKRQSLLFSATMS 189
>gi|296808427|ref|XP_002844552.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
gi|238844035|gb|EEQ33697.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
Length = 807
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 49/239 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ L L +++ + +GF PTPIQ+ IP A GK D++G A TGSGKT AF +PI
Sbjct: 294 SFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALL-GK-DVVGGAVTGSGKTAAFIVPI 351
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGIN 291
++RLL Y P+ R I+ PTRELA+Q + ++A +
Sbjct: 352 LERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNVATKLATFTD 392
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ +VGG S +QE +LK RP++++ TPGR + M V+ TL +LDEADR
Sbjct: 393 ITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILILDEADR 450
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
M+E+G EL I+ +P K RQT++FSAT+ S D
Sbjct: 451 MLEDGFAEELNEILTTIP------------------------KSRQTMLFSATMTSSVD 485
>gi|303317730|ref|XP_003068867.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108548|gb|EER26722.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 840
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 128/255 (50%), Gaps = 49/255 (19%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIG 217
A EE +++E ++ + L +++ + +GF PTPIQ+ IP GK D++G
Sbjct: 304 APEENPTKSEETSSNSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPIGLL-GK-DLVG 361
Query: 218 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTREL 275
A TGSGKT AF +PI++RLL Y P+ R I+ PTREL
Sbjct: 362 GAVTGSGKTAAFIIPILERLL-------------------YRPRKVPTSRVAILMPTREL 402
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
A+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M
Sbjct: 403 AVQCYNVATKLATYTDITFCQLVGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFT 462
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
V+ TL VLDEADRM+E+G EL I++ +P K
Sbjct: 463 VD--TLEILVLDEADRMLEDGFADELNEILNTIP------------------------KS 496
Query: 396 RQTLVFSATIALSAD 410
RQT++FSAT+ S D
Sbjct: 497 RQTMLFSATMTDSVD 511
>gi|83950175|ref|ZP_00958908.1| putative ATP-dependent RNA helicase protein [Roseovarius
nubinhibens ISM]
gi|83838074|gb|EAP77370.1| putative ATP-dependent RNA helicase protein [Roseovarius
nubinhibens ISM]
Length = 431
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 125/234 (53%), Gaps = 45/234 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
FD ++ L L P L +++ R GF EPTPIQ IP A +G DI+G A+TG+GKTLAFGL
Sbjct: 2 FD-FDMLGLAPALNEALTRAGFSEPTPIQNQAIPLAL-EGH-DILGLAQTGTGKTLAFGL 58
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P++ LL E G+ A K A +ALI+ PTREL Q+ D L+ + G
Sbjct: 59 PLINHLLAE----------PGKPAPKTA-----KALILAPTRELVNQIADSLRNLTDGTR 103
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+RV +VGG S +Q L +++V TPGRL +LM ++ V+L ++ VLDEAD+
Sbjct: 104 LRVATVVGGQSINRQITFLARGTDILVATPGRLIDLM---DRRAVDLGSVRHLVLDEADQ 160
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G L+ I L RQT++FSAT+
Sbjct: 161 MLDLGFIHALRKIAPRL------------------------GTPRQTMLFSATM 190
>gi|124506289|ref|XP_001351742.1| snrnp protein, putative [Plasmodium falciparum 3D7]
gi|23504671|emb|CAD51549.1| snrnp protein, putative [Plasmodium falciparum 3D7]
Length = 1123
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L L+K+I + +++PTPIQ IP A D+IG AETGSGKT AF LP++
Sbjct: 700 WEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMR--DLIGIAETGSGKTAAFVLPML 757
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K L E + P AL+I P+RELA+Q+ + + A + R
Sbjct: 758 SYV--------KQLPPLTYETSQDGP----YALVIAPSRELAIQIYEETNKFASYCSCRT 805
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG + E Q L+ E+V+GTPGRL + + EK L+ ++ +LDEADRM++
Sbjct: 806 VAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCL---EKAYTVLNQCNYVILDEADRMMD 862
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
G + I+D +P +N +E + Q + + R R T +FSAT+ S +
Sbjct: 863 MGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYRLTQMFSATMPPSVE 918
>gi|295397627|ref|ZP_06807702.1| ATP-dependent RNA helicase DeaD [Aerococcus viridans ATCC 11563]
gi|294974090|gb|EFG49842.1| ATP-dependent RNA helicase DeaD [Aerococcus viridans ATCC 11563]
Length = 509
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 50/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NE+ L L+++I +GF+E TPIQ IP A +GK D+ G A+TG+GKT AFGLP++
Sbjct: 3 FNEMNLSKPLLRAIEEMGFEEATPIQAQTIPMAL-EGK-DVFGQAQTGTGKTAAFGLPLL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ E G ++ALII PTRELA+Q + L + K +
Sbjct: 61 EKVHE---------------------TGGVQALIIEPTRELAVQTGEELYRLGKFKGIHT 99
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ GG S Q +LLK P +V+GTPGR+ +L+ G +++L+ + VLDEAD M++
Sbjct: 100 TTVYGGASIGHQIKLLKKNPPVVIGTPGRILDLIKRG---VLKLNNVETLVLDEADEMLK 156
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++SII LP +RQTL+FSAT+
Sbjct: 157 MGFVEDIESIIRELPT------------------------ERQTLLFSATV 183
>gi|242033243|ref|XP_002464016.1| hypothetical protein SORBIDRAFT_01g010590 [Sorghum bicolor]
gi|241917870|gb|EER91014.1| hypothetical protein SORBIDRAFT_01g010590 [Sorghum bicolor]
Length = 750
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 24/231 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E +L L+++I + G+++P+PIQ A IP Q D+IG AETGSGKT AF LP++
Sbjct: 331 WSESKLGTELLRAIDKAGYEKPSPIQMAAIPLGLQQR--DVIGIAETGSGKTAAFVLPML 388
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ L EE E P A+++ PTRELA Q+ + + A + ++V
Sbjct: 389 SYITR--------LPPISEENEAEGPY----AVVMAPTRELAQQIEEETVKFATYLGIKV 436
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VLDEADRMI+
Sbjct: 437 VSIVGGQSIEEQGFKIRQGCEIVIATPGRLLDCL---ERRYAVLNQCNYVVLDEADRMID 493
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++ ++D +P +N E + E+ +R R T +FSAT+
Sbjct: 494 MGFEPQVVGVLDAMPSSNLKPENEDEELDE-------KRIYRTTYMFSATM 537
>gi|303283946|ref|XP_003061264.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457615|gb|EEH54914.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 809
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 123/233 (52%), Gaps = 44/233 (18%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
+++N+L L L+++ LG+ PTPIQ A +P A G+ DI G A TGSGKT AF LP
Sbjct: 178 ESFNDLNLSRQLIRACTALGYDVPTPIQAAVVPLAL-TGR-DICGRAVTGSGKTAAFMLP 235
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
+++R+L +A A H+ L++ PTRELA+QV +A+ ++
Sbjct: 236 LLERMLHRGARA--------------AAATHV--LVLVPTRELAVQVHQMTMRLAQFTSI 279
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
R +VGG+S Q L+ RPE+VV TPGRL + + H V L L+ VLDEADR+
Sbjct: 280 RAALVVGGLSANTQAAELRTRPEIVVATPGRLIDHVRN--THSVGLEDLAALVLDEADRL 337
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+E G E++ I+ P +RQT++FSAT+
Sbjct: 338 LEMGFLEEIREIVRHCPT------------------------RRQTMLFSATL 366
>gi|170582680|ref|XP_001896237.1| CG10333-PA [Brugia malayi]
gi|158596582|gb|EDP34904.1| CG10333-PA, putative [Brugia malayi]
Length = 719
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 132/233 (56%), Gaps = 17/233 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L + I ++G+KEPTPIQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 314 WEEAGLPAEVFDVIMKIGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFLIPLL 371
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ + + G + + P A+I+ PTRELA Q+ + + + + +R
Sbjct: 372 VWITS-------IPKFHGNDDQDTGPY----AIIMAPTRELAQQIEEETVKFGQLLGIRT 420
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG S E+Q L+ E+V+ TPGRL +++ E + L ++ +LDEADRM++
Sbjct: 421 VSVIGGASREEQGLKLRLGVEVVIATPGRLLDVL---ENRYLSLDQCTYVILDEADRMLD 477
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIA 406
G E+Q +++ +P+TN + + + + + + +KK RQT++F+AT++
Sbjct: 478 MGFEPEVQKVLEYIPVTNLKPDTEEAEKEESIMENFYSKKKYRQTVMFTATMS 530
>gi|138893877|ref|YP_001124330.1| DEAD/DEAH box helicase [Geobacillus thermodenitrificans NG80-2]
gi|134265390|gb|ABO65585.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Geobacillus
thermodenitrificans NG80-2]
Length = 467
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 127/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L +MK+I R+GF+E TPIQ IP + Q K D+IG A+TG+GKT AFG+PI+
Sbjct: 4 FQELGLSKEVMKAIERMGFEETTPIQAKTIPLSL-QNK-DVIGQAQTGTGKTAAFGIPIV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ G ++AL++ PTRELA+QV++ L ++ VRV
Sbjct: 62 EKV--------------------DVKNGVIQALVVAPTRELAIQVSEELYKIGAVKRVRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG E+Q R LK P ++VGTPGR+ + ++ G L + T+ VLDEAD M+
Sbjct: 102 LPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVRTV---VLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P +RQTL+FSAT+
Sbjct: 159 MGFIEDIEAILRHVP------------------------TERQTLLFSATM 185
>gi|226490952|ref|NP_001152536.1| ATP-dependent RNA helicase DDX23 [Zea mays]
gi|195657271|gb|ACG48103.1| ATP-dependent RNA helicase DDX23 [Zea mays]
gi|224030151|gb|ACN34151.1| unknown [Zea mays]
gi|414872390|tpg|DAA50947.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
isoform 1 [Zea mays]
gi|414872391|tpg|DAA50948.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
isoform 2 [Zea mays]
Length = 758
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 24/231 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E +L L+++I + G+++P+PIQ A IP Q D+IG AETGSGKT AF LP++
Sbjct: 339 WSESKLGTELLRAIDKAGYEKPSPIQMAAIPLGLQQR--DVIGIAETGSGKTAAFVLPML 396
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ L EE E P A+++ PTRELA Q+ + + A + ++V
Sbjct: 397 SYITR--------LPPISEENEAEGPY----AVVMAPTRELAQQIEEETVKFATYLGIKV 444
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VLDEADRMI+
Sbjct: 445 VSIVGGQSIEEQGFKIRQGCEIVIATPGRLLDCL---ERRYAVLNQCNYVVLDEADRMID 501
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++ ++D +P +N E + E+ +R R T +FSAT+
Sbjct: 502 MGFEPQVVGVLDAMPSSNLKPENEDEELDE-------KRIYRTTYMFSATM 545
>gi|427400760|ref|ZP_18891998.1| hypothetical protein HMPREF9710_01594 [Massilia timonae CCUG 45783]
gi|425720273|gb|EKU83196.1| hypothetical protein HMPREF9710_01594 [Massilia timonae CCUG 45783]
Length = 523
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 43/233 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P + +++ G+ PTPIQ IP QG+ D++GAA+TG+GKT +F LPI+
Sbjct: 42 FADFGLAPEIQRALSDQGYVHPTPIQAQAIPVVL-QGR-DVMGAAQTGTGKTASFSLPIL 99
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
Q L+ + +P H +RAL++ PTRELA+QV D++K A+ +R
Sbjct: 100 QLLMPHANAS-------------MSPARHPVRALVLVPTRELAVQVADNVKAYARHTPLR 146
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GGM + Q +L+ E+V+ TPGRL + + E+ V L + V+DEADRM+
Sbjct: 147 ATVVFGGMDMKPQTEILRRGVEIVIATPGRLLDHI---EQKNVSLGQVQMLVMDEADRML 203
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G +LQ II++LP K+RQ L+FSAT +
Sbjct: 204 DMGFLPDLQRIINLLP------------------------KQRQNLMFSATFS 232
>gi|255544594|ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 502
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 129/264 (48%), Gaps = 46/264 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++ L L +++ LG K PTP+Q CIP +GK D++G A+TGSGKT F LPI+
Sbjct: 65 FSNLGLAEWAVRTCKELGMKRPTPVQAHCIPKIL-EGK-DVLGLAQTGSGKTATFALPIL 122
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
RL E+ P G + AL+ITPTRELA Q+ + + + +N+R
Sbjct: 123 HRLAED-------------------PYG-IFALVITPTRELAYQLAEQFRALGSCLNLRC 162
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+VGGM Q + L ARP +V+ TPGR+ L+ F VLDEADR+++
Sbjct: 163 AVVVGGMDKLTQAKTLMARPHVVIATPGRVKVLLEDNPDIPSVFSKTKFLVLDEADRVLD 222
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 414
G EL+ + LP K RQTL+FSAT+ + + +
Sbjct: 223 VGFEDELRVVFQCLP------------------------KNRQTLLFSATMTSNLESLLE 258
Query: 415 LKHGSLKLKQSVNGLNSIETLSER 438
+ ++ G +++TL ++
Sbjct: 259 VSANKAYFYEAYEGFKTVDTLKQQ 282
>gi|400596455|gb|EJP64229.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 895
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 152/325 (46%), Gaps = 76/325 (23%)
Query: 86 PGKKTNTKKRKRSSANEEDPGDG--DGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIK 143
PG TN K+ ++A+ + DG +G + GN E LK +K KG+ +K
Sbjct: 23 PGDDTNGKQNGAATADTDFDFDGLMNGHDQGNEDDDEAFIALKQAASFRKTSNLKGRTVK 82
Query: 144 TVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
+ + + ++ L+K+I R GF PTPIQ+
Sbjct: 83 ---------------------------KGGGFQAMGINATLLKAIARKGFSVPTPIQRKT 115
Query: 204 IPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH 263
IP + D++G A TGSGKT AF +P+++RL K G
Sbjct: 116 IPLVLD--RKDVVGMARTGSGKTAAFVIPMIERLRAHSAKFGS----------------- 156
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
RALI++P+RELA+Q +KE++KG +++ V +VGG S E+Q + A P++V+ TPGR
Sbjct: 157 -RALIMSPSRELAIQTLKVVKELSKGTDLKAVLLVGGDSLEEQFGFMAANPDIVIATPGR 215
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
L + +++ ++ + V DEADR+ E G +L I+ LP++
Sbjct: 216 FLHLKV---EMKLDISSIKYVVFDEADRLFEMGFAAQLTEILHALPLS------------ 260
Query: 384 TCVTVSSLQRKKRQTLVFSATIALS 408
RQTL+FSAT+ S
Sbjct: 261 ------------RQTLLFSATLPTS 273
>gi|334340716|ref|YP_004545696.1| DEAD/DEAH box helicase [Desulfotomaculum ruminis DSM 2154]
gi|334092070|gb|AEG60410.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum ruminis DSM
2154]
Length = 482
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 136/255 (53%), Gaps = 54/255 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L L++++ +GF+E TPIQ+ IP A Q D+IG A TG+GKT AFG+P
Sbjct: 4 FYELGLSESLLQALANMGFEEATPIQEKTIPVALQQR--DLIGQAHTGTGKTAAFGVP-- 59
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
M+E+ EEA++ ++ L+ITPTRELA+QV + L + + +R
Sbjct: 60 ------------MVEKFEEEADR------VQGLVITPTRELAVQVAEELNRIGQIKGIRT 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q + LK RP ++VGTPGRL + M ++ + L + VLDEAD M+
Sbjct: 102 LPIYGGQDINRQIKALKKRPHIIVGTPGRLMDHM---DRRTLRLQGIKMVVLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 409
G ++++I+ +P ++RQ+L+FSAT+ L+
Sbjct: 159 MGFIEDIEAILQEIP------------------------EERQSLLFSATMPKPIQVLAQ 194
Query: 410 DFRKKLKHGSLKLKQ 424
F K + S+K K+
Sbjct: 195 RFLKDPEFISIKAKE 209
>gi|294932199|ref|XP_002780153.1| ATP-dependent RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239890075|gb|EER11948.1| ATP-dependent RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 702
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 128/241 (53%), Gaps = 51/241 (21%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 250
LGF PT IQ+ IP A DI+ AAETGSGKTLA+G+P++ +L E + + ++
Sbjct: 149 LGFTIPTQIQRQSIPPALLPIGKDILAAAETGSGKTLAYGIPLLTNIL-YMESSSSLKDD 207
Query: 251 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERL 309
+ + + + L A+++ PTRELA+QV HL +V I ++ + PIVGGMS +KQ RL
Sbjct: 208 NDDNSNR---RRRLDAIVVVPTRELAMQVYTHLIKVGHYIPHLLIAPIVGGMSIQKQHRL 264
Query: 310 LKARPELVVGTPGRLWELMSGG-----------------------EKHLVELHTLSFFVL 346
+ P ++V TPGRL L+ +K + +L T+ VL
Sbjct: 265 MHKVPNIIVATPGRLAALLGCATIKVSGDVLDRADTEIQASDELRKKLIPQLRTI---VL 321
Query: 347 DEADRMI-ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
DEADR++ + GHF++L ++D++ T N K Q LVFSAT+
Sbjct: 322 DEADRLVADEGHFKDLTRVLDIIYTTTQVN-------------------KIQHLVFSATL 362
Query: 406 A 406
A
Sbjct: 363 A 363
>gi|452002395|gb|EMD94853.1| hypothetical protein COCHEDRAFT_1128751 [Cochliobolus
heterostrophus C5]
Length = 815
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 120/237 (50%), Gaps = 45/237 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ + L +++ + +GF EPTPIQ +P A QGK D++G AETGSGKT AF +PI
Sbjct: 290 SFQAMSLSRPILRGLASVGFTEPTPIQSKAVPIAM-QGK-DVVGGAETGSGKTAAFLIPI 347
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
++RLL ++K R I PTRELA+Q + ++A ++
Sbjct: 348 LERLLYRQKKIPTT-----------------RVAIFMPTRELAVQCFNVATKLASFTDIT 390
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG S+ +QE +LK RP++V+ TPGR + M VE L VLDEADRM+
Sbjct: 391 FALMAGGFSSREQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--NLEILVLDEADRML 448
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
E G +L I+ +P K RQT++FSAT+ S D
Sbjct: 449 EEGFESQLNEILTTIP------------------------KSRQTMLFSATMTSSVD 481
>gi|222149464|ref|YP_002550421.1| ATP-dependent RNA helicase [Agrobacterium vitis S4]
gi|221736447|gb|ACM37410.1| ATP-dependent RNA helicase [Agrobacterium vitis S4]
Length = 484
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 129/235 (54%), Gaps = 44/235 (18%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFG 230
E ++NEL L P ++ ++ +LGF+ PTPIQ IP G+ D+IG A+TG+GKT AFG
Sbjct: 16 ELTSFNELGLSPTVVATLTQLGFETPTPIQAQGIPVVM-AGR-DLIGLAQTGTGKTAAFG 73
Query: 231 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 290
LPI++ L+++ E+ R LI+ PTREL Q+ D+L+ +
Sbjct: 74 LPIIELLMKD---------------ERRPDNRTTRTLILAPTRELVNQIGDNLRSFIRKT 118
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+++ +VGG S KQ+ L+ +++V TPGRL +L+S ++ + L ++ VLDEAD
Sbjct: 119 PIKINQVVGGASINKQQLQLERGTDILVATPGRLLDLIS---RNAISLRAVTHLVLDEAD 175
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+M++ G +L+ I M+P KRQTL+FSAT+
Sbjct: 176 QMLDLGFIHDLRKIAKMVP------------------------AKRQTLLFSATM 206
>gi|352684524|ref|YP_004896509.1| DEAD/DEAH box helicase [Acidaminococcus intestini RyC-MR95]
gi|350279179|gb|AEQ22369.1| DEAD/DEAH helicase [Acidaminococcus intestini RyC-MR95]
Length = 537
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 134/245 (54%), Gaps = 53/245 (21%)
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAE 220
E ++E I+T + +L L ++ ++ +GF+EP+PIQK IP A +G DIIG A+
Sbjct: 4 EPMTEPTITT----FEDLNLDKKILSALKDMGFEEPSPIQKGAIPLAL-EGD-DIIGQAQ 57
Query: 221 TGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVT 280
TG+GKT AFG+PI+Q + E+ H++AL+++PTREL +QV
Sbjct: 58 TGTGKTAAFGIPIIQSIDEKNR--------------------HVQALVMSPTRELCIQVA 97
Query: 281 DHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 340
+ + ++ + V V+P+ GG E+Q R LK ++V+GTPGRL + + G L +H
Sbjct: 98 EEISKIGRLKRVHVLPVYGGQPIERQIRSLKHGVQVVIGTPGRLLDHLRRGTISLDHIH- 156
Query: 341 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
F VLDEAD M++ G ++++II +P +RQT++
Sbjct: 157 --FLVLDEADEMLDMGFIEDIETIIKEVP------------------------PERQTML 190
Query: 401 FSATI 405
FSAT+
Sbjct: 191 FSATM 195
>gi|219669142|ref|YP_002459577.1| DEAD/DEAH box helicase [Desulfitobacterium hafniense DCB-2]
gi|219539402|gb|ACL21141.1| DEAD/DEAH box helicase domain protein [Desulfitobacterium hafniense
DCB-2]
Length = 530
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 133/235 (56%), Gaps = 50/235 (21%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
++ E+ L +++++ +GF+EP+PIQKA IP A VD+IG A+TG+GKT AFG+
Sbjct: 6 LQSFGEISLSKQVLQALSEMGFEEPSPIQKAAIPVA--MDGVDLIGQAQTGTGKTAAFGI 63
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGI 290
PI EK PK ++ALI+TPTRELA+QV++ + ++ K
Sbjct: 64 PI---------------------CEKVNPKFQAVQALILTPTRELAVQVSEEISKIGKYR 102
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+++ +PI GG S ++Q R L+ ++VVGTPGR+ + ++ G ++L + VLDEAD
Sbjct: 103 HIKPLPIYGGQSIDRQIRALRFGSQVVVGTPGRILDHLNRGT---LKLQYVKMVVLDEAD 159
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G ++++I+ +P +++RQ ++FSAT+
Sbjct: 160 EMLDMGFVEDIETILKQVP-----------------------KEERQVMLFSATM 191
>gi|326473339|gb|EGD97348.1| ATP-dependent RNA helicase DRS1 [Trichophyton tonsurans CBS 112818]
Length = 700
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 50/256 (19%)
Query: 158 AEEELVSEAEISTEFDA-WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
A E+ V+E++ ++ A + L L +++ + +GF PTPIQ+ IP A GK D++
Sbjct: 280 APEDQVTESKSTSGAPASFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVAL-LGK-DVV 337
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRE 274
G A TGSGKT AF +PI++RLL Y P+ R I+ PTRE
Sbjct: 338 GGAVTGSGKTGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTRE 378
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M
Sbjct: 379 LAVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASF 438
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 394
V+ TL VLDEADRM+E+G EL I+ +P K
Sbjct: 439 TVD--TLEILVLDEADRMLEDGFAEELNEILTTIP------------------------K 472
Query: 395 KRQTLVFSATIALSAD 410
RQT++FSAT+ S D
Sbjct: 473 SRQTMLFSATMTNSVD 488
>gi|410458653|ref|ZP_11312411.1| DEAD/DEAH box helicase [Bacillus azotoformans LMG 9581]
gi|409931248|gb|EKN68234.1| DEAD/DEAH box helicase [Bacillus azotoformans LMG 9581]
Length = 501
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 124/231 (53%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL + +MKSI +GF+E TPIQ IP + QGK D+IG A+TG+GKT AFG+P++
Sbjct: 4 FHELGISEKIMKSIQAMGFEEATPIQSETIPVSL-QGK-DVIGQAQTGTGKTAAFGIPMI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ ++ +++ PTRELA+QV + L + + V+
Sbjct: 62 EKI--------------------DIKNTFIQGIVVAPTRELAIQVAEELNRIGQFKGVKA 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK RP+++VGTPGRL + M+ + + L + VLDEAD M+
Sbjct: 102 LPIYGGQDINRQIRALKNRPQIIVGTPGRLMDHMN---RKTIRLQNIQVVVLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P + RQTL+FSAT+
Sbjct: 159 MGFIEDIEAILKEVP------------------------EVRQTLLFSATM 185
>gi|433653854|ref|YP_007297562.1| DNA/RNA helicase, superfamily II [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292043|gb|AGB17865.1| DNA/RNA helicase, superfamily II [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 514
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L+ ++K+I +GF+EP+ IQ IP D+IG AETG+GKTLA+G PI+
Sbjct: 3 FKELNLNEKILKAIDDMGFEEPSKIQSEVIPVLLEGS--DVIGQAETGTGKTLAYGAPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
G + G + LI+TPTRELA+Q+ D L + K VR+
Sbjct: 61 NSF--------------G------SNDGKVFCLILTPTRELAIQINDELARIGKYSKVRL 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG+ ++Q + +K ++VVGTPGR+ +L+ ++++++L ++ + V+DEAD M++
Sbjct: 101 LPVYGGVQIDRQIKAIKRGVDIVVGTPGRVLDLI---KRNVLDLKSVKYLVIDEADEMLD 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II N +NE +RQT++FSAT+
Sbjct: 158 MGFIDDIKEII------NHTNE------------------ERQTMMFSATM 184
>gi|302414960|ref|XP_003005312.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Verticillium
albo-atrum VaMs.102]
gi|261356381|gb|EEY18809.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Verticillium
albo-atrum VaMs.102]
Length = 510
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 128/232 (55%), Gaps = 18/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E L L+ ++R+G+ +PTPIQ+A IP A D+IG A TGSGKT +F LP++
Sbjct: 219 WDESGLPGRLLDIVHRVGYNDPTPIQRAAIPIALQ--ARDLIGVAVTGSGKTASFLLPLL 276
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ + L GE + P G LI+ PTREL Q+ + A + RV
Sbjct: 277 VYISD--------LPPLGEMNKNDGPYG----LILAPTRELVQQIESEANKFATPLGFRV 324
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 325 VSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCI---ERRLLVLGQCCYVIMDEADRMID 381
Query: 355 NGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G + I+D LP++N + ++E Q + + RQT++++AT+
Sbjct: 382 LGFEEPVNKILDALPVSNEKPDTDEAENAQLMKRYLGGKDRYRQTMMYTATM 433
>gi|323143379|ref|ZP_08078066.1| cold-shock DEAD-box protein A [Succinatimonas hippei YIT 12066]
gi|322416845|gb|EFY07492.1| cold-shock DEAD-box protein A [Succinatimonas hippei YIT 12066]
Length = 683
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 136/242 (56%), Gaps = 38/242 (15%)
Query: 141 KIKTVE--ESVTVSNGPDDA----------EEELVSEAEISTEFDAWNELRLHPLLMKSI 188
+IK VE +SV VS G D++ E++ E E E +++ L+L PL++++I
Sbjct: 9 EIKEVESSDSVAVSVGADESLLLKENEEQNNEQVDVEEEKEPELISFDSLQLSPLVLQAI 68
Query: 189 YRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKML 248
LGF+ PTPIQ+ IP D+IG A+TG+GKT AF LPI+ +L E +
Sbjct: 69 KDLGFESPTPIQERAIPVMMSGD--DMIGQAQTGTGKTAAFALPILSKLEPENK------ 120
Query: 249 EEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQE 307
++ AL++ PTRELALQV + + A+ I + VVPI GG S + Q
Sbjct: 121 --------------NIFALVLEPTRELALQVAESFQAFARHIEDFHVVPIYGGASYDNQI 166
Query: 308 RLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 367
R ++ ++VV TPGRL +L+ G+ ++L ++S+ V+DEAD M+ G ++ I++
Sbjct: 167 RSIRHGAQVVVATPGRLIDLIERGK---IDLSSVSYMVIDEADEMLRMGFIDDVDWILNH 223
Query: 368 LP 369
P
Sbjct: 224 TP 225
>gi|20092752|ref|NP_618827.1| ATP-dependent RNA helicase [Methanosarcina acetivorans C2A]
gi|19918045|gb|AAM07307.1| ATP-dependent RNA helicase [Methanosarcina acetivorans C2A]
Length = 555
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 118/191 (61%), Gaps = 24/191 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ L L +K++ + GF+EPTPIQ+ IP +G+ DIIG A+TG+GKT AFG PI+
Sbjct: 7 FKALGLSDSTLKALKKKGFEEPTPIQEKVIPLFL-KGESDIIGQAQTGTGKTTAFGAPII 65
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ E+ G+++A+I+TPTRELA+QV++ L + + V
Sbjct: 66 EKIPEK--------------------SGYVQAIILTPTRELAIQVSEELNSIKGDKKLHV 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
VPI GG S +Q R+LK+ ++VVGTPGR+ + + E+ ++L +++FVLDEAD M+
Sbjct: 106 VPIYGGQSMTQQLRVLKSGVDIVVGTPGRIIDHL---ERKSLDLEHIAYFVLDEADEMLN 162
Query: 355 NGHFRELQSII 365
G +++ I+
Sbjct: 163 MGFIDDIKEIL 173
>gi|354605411|ref|ZP_09023399.1| hypothetical protein HMPREF9450_02314 [Alistipes indistinctus YIT
12060]
gi|353346953|gb|EHB91231.1| hypothetical protein HMPREF9450_02314 [Alistipes indistinctus YIT
12060]
Length = 400
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 128/247 (51%), Gaps = 50/247 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NEL + +++++ G+ EPTPIQ+ IP +GK DI G A+TG+GKT AF +PI+
Sbjct: 3 FNELNIAEPILRAVCEKGYNEPTPIQEQAIPVVL-RGK-DIFGIAQTGTGKTAAFAIPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPK---------GH-------LRALIITPTRELALQ 278
Q LL++ E+ E A P H +RALI+TPTRELALQ
Sbjct: 61 QHLLKKNEQ-----NIAAEPASTNEPGRARRNRRGRSHGKKEYRAIRALILTPTRELALQ 115
Query: 279 VTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 338
+ D + K +R I GG+ Q L+ ++++ TPGRL +L+ E V L
Sbjct: 116 INDCFTDYGKYTGLRHTAIFGGVKQHPQTEKLRQGVDILIATPGRLLDLIGQDE---VRL 172
Query: 339 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQT 398
+L+ FVLDEADRM++ G +++ ++ MLP +RQT
Sbjct: 173 ESLTHFVLDEADRMLDMGFIADIRRLLPMLP------------------------AERQT 208
Query: 399 LVFSATI 405
L FSAT+
Sbjct: 209 LFFSATM 215
>gi|227825056|ref|ZP_03989888.1| DEAD/DEAH helicase [Acidaminococcus sp. D21]
gi|226905555|gb|EEH91473.1| DEAD/DEAH helicase [Acidaminococcus sp. D21]
Length = 532
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 133/243 (54%), Gaps = 53/243 (21%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
++E I+T + +L L ++ ++ +GF+EP+PIQK IP A +G DIIG A+TG
Sbjct: 1 MTEPTITT----FEDLNLDKKILSALKDMGFEEPSPIQKGAIPLAL-EGD-DIIGQAQTG 54
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 282
+GKT AFG+PI+Q + E+ H++AL+++PTREL +QV +
Sbjct: 55 TGKTAAFGIPIIQSIDEKNR--------------------HVQALVMSPTRELCIQVAEE 94
Query: 283 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 342
+ ++ + V V+P+ GG E+Q R LK ++V+GTPGRL + + G L +H
Sbjct: 95 ISKIGRLKRVHVLPVYGGQPIERQIRSLKHGVQVVIGTPGRLLDHLRRGTISLDHIH--- 151
Query: 343 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 402
F VLDEAD M++ G ++++II +P +RQT++FS
Sbjct: 152 FLVLDEADEMLDMGFIEDIETIIKEVP------------------------PERQTMLFS 187
Query: 403 ATI 405
AT+
Sbjct: 188 ATM 190
>gi|384567061|ref|ZP_10014165.1| DNA/RNA helicase, superfamily II [Saccharomonospora glauca K62]
gi|384522915|gb|EIF00111.1| DNA/RNA helicase, superfamily II [Saccharomonospora glauca K62]
Length = 577
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 132/257 (51%), Gaps = 48/257 (18%)
Query: 149 VTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAA 208
V ++ DA E + A++ T A+ +L L P L+K++ LG++EPTPIQ+A IP
Sbjct: 2 VAITAESHDAPEGAIDTADLGTAV-AFGDLGLRPELLKALSDLGYEEPTPIQRAAIPPLL 60
Query: 209 HQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALI 268
D++G A TG+GKT AF LP++ R+ + ++G E AL+
Sbjct: 61 EGA--DVVGQAATGTGKTAAFSLPVLHRIADL---------DRGTEPS---------ALV 100
Query: 269 ITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELM 328
+ PTRELA QV + + + VRVVP+ GG +Q R L++ ++VV TPGR + +
Sbjct: 101 LVPTRELAAQVCEAMYRYGHHLGVRVVPVYGGQPMGRQLRSLESGVDVVVATPGRALDHL 160
Query: 329 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTV 388
S G ++L L VLDEAD M++ G ++ +I+D P
Sbjct: 161 SRGS---LDLSKLRMVVLDEADEMLDMGFAEDIDAILDRTP------------------- 198
Query: 389 SSLQRKKRQTLVFSATI 405
RQT++FSAT+
Sbjct: 199 -----DDRQTMLFSATM 210
>gi|381182260|ref|ZP_09891076.1| ATP-dependent RNA helicase DeaD [Listeriaceae bacterium TTU M1-001]
gi|380317854|gb|EIA21157.1| ATP-dependent RNA helicase DeaD [Listeriaceae bacterium TTU M1-001]
Length = 502
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++E L ++KS+ R+GF+E TPIQ+ IP GK D+IG A+TG+GKT AFGLP++
Sbjct: 4 FSEFGLDEKIVKSVERMGFEEATPIQEKTIPIGL-AGK-DLIGQAQTGTGKTAAFGLPMI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q++ ++ G ++ALII PTRELA+QV++ L +++ +VRV
Sbjct: 62 QKIDQK--------------------NGDVQALIIAPTRELAIQVSEELYKLSYDKHVRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GG +Q R LK +P++VVGTPGR+ + ++ + ++L + VLDEAD M+
Sbjct: 102 LAVYGGSDISRQIRSLKKKPQIVVGTPGRILDHIN---RRTLKLDNVQTLVLDEADEMLN 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++SI+ +P +RQTL+FSAT+
Sbjct: 159 MGFIDDIESILKEVP------------------------SERQTLLFSATM 185
>gi|300088260|ref|YP_003758782.1| DEAD/DEAH box helicase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527993|gb|ADJ26461.1| DEAD/DEAH box helicase domain protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 429
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 126/242 (52%), Gaps = 49/242 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ LHP + + G+ EPTPIQ IP A QG+ D+IG A+TG+GKT AF LP++
Sbjct: 3 FENFDLHPAVRDGVKSAGYTEPTPIQAQAIPPAL-QGR-DLIGLAQTGTGKTTAFVLPML 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRLL P+G LR LI++PTRELA Q+ D +K +++ +R
Sbjct: 61 QRLLR-------------------GPRGKLRGLIVSPTRELAEQIYDSVKTLSQHTGLRA 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG+ E Q+ L+A ++V+ PGRL + + G ++ + V+DEADRM +
Sbjct: 102 MAIYGGVGMEPQKAKLRAGTDIVIACPGRLLDHVWQGT---IDFDDVEMLVIDEADRMFD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 414
G +++ I+ L R +RQTL+FSAT + AD RK
Sbjct: 159 MGFLPDIRKIL-----------------------RCLVRPERQTLLFSAT--MPADVRKL 193
Query: 415 LK 416
++
Sbjct: 194 VQ 195
>gi|311280327|ref|YP_003942558.1| DEAD/DEAH box helicase [Enterobacter cloacae SCF1]
gi|308749522|gb|ADO49274.1| DEAD/DEAH box helicase domain protein [Enterobacter cloacae SCF1]
Length = 446
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 134/233 (57%), Gaps = 43/233 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L L+P +++++ G++EPTPIQK IPA +G+ D++ +A+TG+GKT F LP+
Sbjct: 2 SFDTLGLNPEILRAVAEQGYREPTPIQKQAIPAVL-EGR-DLMASAQTGTGKTAGFTLPL 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+QRL++ A KG +RALI+TPTRELA QV ++++E +K +N+R
Sbjct: 60 LQRLVQNEPHA------KGRRP--------IRALILTPTRELAAQVGENVREYSKYLNIR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ + GG+S Q L+ +++V TPGRL +L ++ ++L ++ VLDEADRM+
Sbjct: 106 SLVVFGGVSINPQMMKLRGGVDILVATPGRLLDLE---HQNALKLDSVEVLVLDEADRML 162
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G +++ ++ LP KRQ L+FSAT +
Sbjct: 163 DMGFIHDIRRVLAKLP------------------------AKRQNLLFSATFS 191
>gi|83766036|dbj|BAE56179.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 856
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 130/256 (50%), Gaps = 50/256 (19%)
Query: 158 AEEELVSE---AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVD 214
A EE SE AE+S + ++ E L +++ + + F PTPIQ+ IP A GK D
Sbjct: 322 APEEQTSEQSAAELSKK--SFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALL-GK-D 377
Query: 215 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 274
I+G+A TGSGKT AF +PI++RLL K P R I+ PTRE
Sbjct: 378 IVGSAVTGSGKTAAFVVPILERLLFRPRKV---------------PTS--RVAILMPTRE 420
Query: 275 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 334
LA+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M
Sbjct: 421 LAVQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASF 480
Query: 335 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 394
V+ TL VLDEADRM+E+G EL I+ +P K
Sbjct: 481 TVD--TLEILVLDEADRMLEDGFADELNEILTTIP------------------------K 514
Query: 395 KRQTLVFSATIALSAD 410
RQT++FSAT+ S D
Sbjct: 515 SRQTMLFSATMTDSVD 530
>gi|440288419|ref|YP_007341184.1| DNA/RNA helicase, superfamily II [Enterobacteriaceae bacterium
strain FGI 57]
gi|440047941|gb|AGB78999.1| DNA/RNA helicase, superfamily II [Enterobacteriaceae bacterium
strain FGI 57]
Length = 463
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 141/252 (55%), Gaps = 48/252 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L L P ++++I LG++EPTPIQ+ IPA QG+ D++ +A+TG+GKT F LP+
Sbjct: 2 SFDSLGLSPEILRAIVELGYREPTPIQQQAIPAVL-QGR-DLMASAQTGTGKTAGFTLPL 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q L+ + A KG +RALI+TPTRELA Q+ ++++E ++ +N+R
Sbjct: 60 LQHLITTQPHA------KGRRP--------VRALILTPTRELAAQIGENVREYSQYLNIR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ + GG+S Q L+ +++V TPGRL +L ++ V+L + VLDEADRM+
Sbjct: 106 SLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLE---HQNAVKLDGIEILVLDEADRML 162
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR- 412
+ G +++ ++ LP KRQ L+FSAT S D +
Sbjct: 163 DMGFIHDIRRVLAKLP------------------------AKRQNLLFSAT--FSDDIKA 196
Query: 413 --KKLKHGSLKL 422
+KL H L++
Sbjct: 197 LAEKLLHNPLEI 208
>gi|418575592|ref|ZP_13139742.1| putative ATP-dependent RNA helicase [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379325994|gb|EHY93122.1| putative ATP-dependent RNA helicase [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 487
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 123/210 (58%), Gaps = 36/210 (17%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 250
+GF E TPIQK IP A +GK D++G A+TG+GKT AFG+P++
Sbjct: 1 MGFNEATPIQKESIPLAL-EGK-DVLGQAQTGTGKTGAFGIPLI---------------- 42
Query: 251 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL 310
EK A + +++LI+ PTRELA+QV + LK AKG N++VV + GGM ++Q + L
Sbjct: 43 -----EKVADQEGVQSLILAPTRELAMQVAESLKAFAKGQNIQVVTVFGGMPIDRQIKAL 97
Query: 311 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 370
K P++VVGTPGR+ + ++ ++HTL +LDEAD M+ G +++ I+D +P
Sbjct: 98 KKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNMGFIDDMKFIMDKIP- 153
Query: 371 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 400
+EQ QT + S+ K QTLV
Sbjct: 154 --------AEQRQTML-FSATMPKAIQTLV 174
>gi|348026760|ref|YP_004766565.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
elsdenii DSM 20460]
gi|341822814|emb|CCC73738.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
elsdenii DSM 20460]
Length = 526
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 126/234 (53%), Gaps = 47/234 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+ + L + ++++++ +GF+EPTPIQ IP A D+IG A+TG+GKT A+G+
Sbjct: 2 LEQFQNLNISEVIIRALNEMGFEEPTPIQAESIPVAMSGS--DMIGQAQTGTGKTAAYGI 59
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P+++++L K P ++ ++++PTRELA+QV + L +A+ N
Sbjct: 60 PVLEKIL------------------KAEPSKDIQTVVLSPTRELAMQVAEELNHLAQFTN 101
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
++ +PI GG E+Q R L+ P+++V TPGRL + M G ++L ++ VLDEAD
Sbjct: 102 IQALPIYGGQDMERQLRRLRKCPQIIVATPGRLIDHMKRGT---IDLSHITTIVLDEADE 158
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
M++ G ++ I+ P T RQTL+FSAT+
Sbjct: 159 MLDMGFIDDINIIMAATPNT------------------------RQTLLFSATM 188
>gi|393220338|gb|EJD05824.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 740
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 138/258 (53%), Gaps = 25/258 (9%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+I +W E + P +++ + ++G+KEP+ IQ+ IP D+IG AETGSGKT
Sbjct: 309 QIPHPLRSWTESEIPPTILEVVEKVGYKEPSAIQRQAIPIGLQNR--DLIGIAETGSGKT 366
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
AF +P++ + L E+ P ALI+ PTRELA Q+ ++
Sbjct: 367 AAFVIPMLTYI--------SNLPPFTEDNRHLGPY----ALILAPTRELAQQIESETRKF 414
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
A + + V IVGG S E+Q+ L+ E+++ TPGRL +++ E+H++ L S+ V+
Sbjct: 415 ASPLGFKCVSIVGGRSVEEQQFNLREGAEIIIATPGRLKDVI---ERHVIVLSQCSYIVM 471
Query: 347 DEADRMIENGHFRELQSIIDMLP--MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
DEADRM+ G +L I+D LP M G +EG + V + + R T +FSAT
Sbjct: 472 DEADRMVNLGFEVDLTFILDKLPSEMLKGEDEGMMDVDGEMVR----RGRTRVTTLFSAT 527
Query: 405 I--ALSADFRKKLKHGSL 420
+ A+ RK LK ++
Sbjct: 528 MPPAVERLTRKYLKKPAI 545
>gi|333895980|ref|YP_004469854.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111245|gb|AEF16182.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 513
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L+ ++K+I +GF+EP+ IQ IP +D+IG AETG+GKTLA+G PI+
Sbjct: 3 FKELHLNEKILKAIDDMGFEEPSKIQSEVIPVLLEG--LDVIGQAETGTGKTLAYGAPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ G + L++TPTRELA+QV D L + K VR+
Sbjct: 61 NNF--------------------SSNDGKVFCLVLTPTRELAIQVNDELARIGKYSKVRL 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG+ ++Q + +K ++VVGTPGR+ +L+ ++++++L ++ + V+DEAD M++
Sbjct: 101 LPVYGGVQIDRQIKAIKRGVDIVVGTPGRVLDLI---KRNVLDLKSVRYLVIDEADEMMD 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II N +N K+RQT++FSAT+
Sbjct: 158 MGFIDDIKEII------NHTN------------------KERQTMMFSATM 184
>gi|209517599|ref|ZP_03266438.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
gi|209502012|gb|EEA02029.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
Length = 510
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 131/245 (53%), Gaps = 43/245 (17%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
+S+ ++ + +++ L P ++K+I G+ PTPIQ IP G+ D++GAA+TG
Sbjct: 23 MSDTAVTPSTETFDQFGLAPDILKAIKESGYTSPTPIQAKAIPVVL-AGR-DVMGAAQTG 80
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTD 281
+GKT +F LPI+QRLL + + +P H +RALI+TPTRELA QV
Sbjct: 81 TGKTASFSLPIIQRLLPQASTSA-------------SPARHPVRALILTPTRELADQVAA 127
Query: 282 HLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 341
+++ AK +R + GG+ Q L+ E+++ TPGRL + + ++ L +
Sbjct: 128 NVQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHV---QQKTANLGQV 184
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 401
VLDEADRM++ G +LQ I+++LP K+RQTL+F
Sbjct: 185 QMLVLDEADRMLDMGFLPDLQRILNLLP------------------------KERQTLLF 220
Query: 402 SATIA 406
SAT +
Sbjct: 221 SATFS 225
>gi|119578414|gb|EAW58010.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_a [Homo
sapiens]
Length = 634
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 200 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 257
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 258 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 306
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLD
Sbjct: 307 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLD 363
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 364 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 422
Query: 405 I 405
+
Sbjct: 423 M 423
>gi|358392056|gb|EHK41460.1| hypothetical protein TRIATDRAFT_162817, partial [Trichoderma
atroviride IMI 206040]
Length = 760
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 118/229 (51%), Gaps = 49/229 (21%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREK 243
+M+ I +GF +PTPIQ IP A GK D++G A TGSGKT AF LPI++RLL
Sbjct: 256 IMRGITAVGFTKPTPIQAKTIPIAL-MGK-DVVGGAVTGSGKTAAFVLPILERLL----- 308
Query: 244 AGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGM 301
Y PK R +I+TPTRELA+Q ++A +++ VGG+
Sbjct: 309 --------------YRPKKIPTTRVVILTPTRELAIQCHAVATKLAAHTDIKFTLAVGGL 354
Query: 302 STEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 361
S + QE L+ RP++++ TPGR + M V+ T+ VLDEADRM+E+G EL
Sbjct: 355 SLKAQETELRLRPDVIIATPGRFIDHMRNSASFSVD--TVEILVLDEADRMLEDGFADEL 412
Query: 362 QSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
I+ LP K RQT++FSAT+ + D
Sbjct: 413 NEILTTLP------------------------KSRQTMLFSATMTSTVD 437
>gi|149910407|ref|ZP_01899049.1| ATP-dependent RNA helicase, DEAD box family [Moritella sp. PE36]
gi|149806555|gb|EDM66524.1| ATP-dependent RNA helicase, DEAD box family [Moritella sp. PE36]
Length = 460
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 132/231 (57%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + + P L+ SI LGF++ T +Q+A IP G DI+ ++TGSGKT+A+GLPI+
Sbjct: 3 FQDFGIDPRLISSIEHLGFEQATEVQEAAIPLIL--GGCDIMATSQTGSGKTIAYGLPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QR+L++R E + +RA+I+ PTRELA+QV ++K + ++ ++
Sbjct: 61 QRMLKQRR-----FEHRA-----------VRAVILAPTRELAIQVHANMKHLGMSLDYQI 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I+G S + QE+LL+ PE+++ TPGRL + + EK + L L F VLDEADRM++
Sbjct: 105 QLIIGRESFQHQEKLLRKNPEVLIATPGRLLDHIR--EKS-ISLEHLEFLVLDEADRMLD 161
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G FR+ D+ ++N S KRQT++FSAT+
Sbjct: 162 MG-FRD-----DVSAISN-----------------SAPNVKRQTMLFSATL 189
>gi|398835789|ref|ZP_10593146.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
gi|398215227|gb|EJN01792.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
Length = 487
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 123/233 (52%), Gaps = 43/233 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L P +++++ G+ PTPIQ IP QG+ D++GAA+TG+GKT F LPI+
Sbjct: 18 FEDFGLSPDILRALTEQGYVHPTPIQAQAIPVVL-QGR-DVMGAAQTGTGKTAGFSLPII 75
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
Q LL + +P H +RALI+TPTRELA QV D++K ++ +R
Sbjct: 76 QLLL-------------AHASTSASPARHPVRALILTPTRELADQVADNVKAYSRFTPLR 122
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG+ Q L+A E+V+ TPGRL + + ++ V L V+DEADRM+
Sbjct: 123 STVVFGGVDMAPQTATLRAGVEIVIATPGRLLDHV---QQKTVNLSQTQILVMDEADRML 179
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G +LQ II++LP KKRQ L+FSAT +
Sbjct: 180 DMGFLPDLQRIINLLP------------------------KKRQNLMFSATFS 208
>gi|367014751|ref|XP_003681875.1| hypothetical protein TDEL_0E04210 [Torulaspora delbrueckii]
gi|359749536|emb|CCE92664.1| hypothetical protein TDEL_0E04210 [Torulaspora delbrueckii]
Length = 740
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 124/232 (53%), Gaps = 46/232 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+N L L ++K + LG+ P+PIQ A IP A GK DII A TGSGKT AF +PI+
Sbjct: 221 FNSLSLSRPVLKGLGDLGYTRPSPIQSATIPIAL-LGK-DIIAGAVTGSGKTAAFMIPII 278
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+RLL K A R +++TPTRELA+QV+D K++ K ++
Sbjct: 279 ERLLY-----------------KPAKIASTRVIVLTPTRELAIQVSDVAKKLGKYVSGLT 321
Query: 295 VPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ VGG++ +QE+ LKARP++VV TPGR + + V+ ++ V+DEADRM+
Sbjct: 322 FGLAVGGLNLRQQEQSLKARPDIVVATPGRFIDHIRNSASFNVD--SVEVLVIDEADRML 379
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
E G EL I+ +LP KRQTL+FSAT+
Sbjct: 380 EEGFQEELNEILSLLP------------------------SKRQTLLFSATM 407
>gi|354547460|emb|CCE44195.1| hypothetical protein CPAR2_504190 [Candida parapsilosis]
Length = 604
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 50/240 (20%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
E ST F EL+L ++KSI L F PTPIQ + IP A GK DI+ A+TGSGKT
Sbjct: 122 ETSTTF---QELQLSRPILKSIQSLSFTSPTPIQSSTIPIALL-GK-DIVAGAQTGSGKT 176
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
A+ +P+++RL+ + +A+I+TPTRELA+QV D K++
Sbjct: 177 AAYLIPLIERLI-------------------FKNATSTKAIILTPTRELAIQVYDVGKKL 217
Query: 287 AKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+ + N+ VGG++ +QE+ LK+RP++V+ TPGRL + + VE + V
Sbjct: 218 GQFVKNLSFGLAVGGLNLRQQEQQLKSRPDIVIATPGRLIDHIRNSPSFSVE--DVQVLV 275
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+DEADRM+E G EL I+ ++P ++KRQTL+FSAT+
Sbjct: 276 IDEADRMLEEGFQEELTEILSLIP-----------------------KQKRQTLLFSATM 312
>gi|398343323|ref|ZP_10528026.1| DEAD/DEAH box helicase [Leptospira inadai serovar Lyme str. 10]
Length = 554
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 126/233 (54%), Gaps = 48/233 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P L KSI + GF E TPIQ+ IP +GK DI G A+TG+GKT+AF +PI+
Sbjct: 3 FEELNLEPSLQKSIEKAGFVELTPIQEKAIPHGI-EGK-DITGLAQTGTGKTVAFLVPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+L + K + LI+ PTREL +Q+++ +++ K + RV
Sbjct: 61 HNILTKGIKG-------------------VSTLILAPTRELVIQISEEAEKLLKYTDYRV 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
VPI+GG + Q R L+A ++V TPGRL +L GG +L + FFVLDEADRM++
Sbjct: 102 VPIIGGTDYKSQNRDLQALNGIIVATPGRLIDLARGGT---ADLDKVEFFVLDEADRMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
G +++ ++ C R ++QTL+FSAT+++
Sbjct: 159 MGFINDIRWLL-----------------HKC-------RNRKQTLLFSATLSV 187
>gi|332023103|gb|EGI63364.1| Putative ATP-dependent RNA helicase DDX23 [Acromyrmex echinatior]
Length = 789
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 141/233 (60%), Gaps = 17/233 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E ++ I ++G+K+ TPIQ+ IP DIIG AETGSGKTLAF +P+
Sbjct: 362 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNR--DIIGVAETGSGKTLAFLIPL 419
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 420 LLWITS----LPKI--ERLEEADQ-GP----YSIILAPTRELAQQIEEETNKFGQPLGIR 468
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI
Sbjct: 469 TVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMI 525
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 526 DMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 578
>gi|409200280|ref|ZP_11228483.1| ATP-dependent RNA helicase [Pseudoalteromonas flavipulchra JG1]
Length = 411
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 45/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL+LHP L+ +I LGF PTPIQ+ IP D+I +A+TG+GKT AF LPI+
Sbjct: 3 FSELQLHPELLSAITELGFASPTPIQEKSIPLLL--SGCDLIASAQTGTGKTAAFMLPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+L + +GE++ ++ALI+TPTRELA QV +H +++ ++ V
Sbjct: 61 HSML--------IGATQGEKS--------VKALILTPTRELAQQVAEHTEKLVVNTSLNV 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GG + QE+ L+A ++VV TPGRL + + G + L + V DEADRM++
Sbjct: 105 VCLYGGANIGPQEKRLRAGVDVVVATPGRLLDHLIKGT---LTLKNIQHLVFDEADRMLD 161
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G E++ I+ +P+ KRQTL+FSAT+
Sbjct: 162 MGFMGEIKRIMRTMPL------------------------KRQTLLFSATV 188
>gi|152974078|ref|YP_001373595.1| DEAD/DEAH box helicase [Bacillus cytotoxicus NVH 391-98]
gi|152022830|gb|ABS20600.1| DEAD/DEAH box helicase domain protein [Bacillus cytotoxicus NVH
391-98]
Length = 511
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L L++S+ ++GF+E TPIQ IP A QGK DIIG A+TG+GKT AFGLP++
Sbjct: 16 FRELGLSDSLLQSVEKMGFEEATPIQAETIPHAL-QGK-DIIGQAQTGTGKTAAFGLPLL 73
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ +E ++ ++I PTRELA+QV + L ++ + VR+
Sbjct: 74 EKVDTNKE--------------------MVQGIVIAPTRELAIQVGEELYKIGQHKRVRI 113
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK RP ++VGTPGR+ + ++ + + L + VLDEAD M+
Sbjct: 114 LPIYGGQDINRQIRALKKRPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLN 170
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P T+ QTL+FSAT+
Sbjct: 171 MGFIEDIEAILTDVPETH------------------------QTLLFSATM 197
>gi|68074371|ref|XP_679100.1| snrnp protein [Plasmodium berghei strain ANKA]
gi|56499760|emb|CAH95922.1| snrnp protein, putative [Plasmodium berghei]
Length = 782
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L L+K+I + +++PTPIQ IP A D+IG AETGSGKT AF LP++
Sbjct: 360 WEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEMR--DLIGIAETGSGKTAAFVLPML 417
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K L E + P ALII P+RELA+Q+ + + A + R
Sbjct: 418 SYV--------KQLPPLTYETSQDGP----YALIIAPSRELAIQIYEETNKFASYCSCRT 465
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG + E Q L+ E+V+GTPGRL + + EK L+ ++ ++DEADRM++
Sbjct: 466 VAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCL---EKAYTVLNQCNYVIIDEADRMMD 522
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
G + I+D +P +N +E + Q + + R R T +FSAT+ S +
Sbjct: 523 MGFEDAVHFILDNIPTSNLKSEDDALALQEEMMAKAGHRLYRLTQMFSATMPPSVE 578
>gi|311104225|ref|YP_003977078.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
gi|310758914|gb|ADP14363.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
Length = 493
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 124/233 (53%), Gaps = 43/233 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + LHPLL++SI G+ PTPIQ IP +G+ D++GAA+TG+GKT AF LPI+
Sbjct: 19 FTDFGLHPLLLQSIAETGYTTPTPIQAQAIPVVV-EGR-DVMGAAQTGTGKTAAFTLPIL 76
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
RL+ + +P H +RALI+TPTRELA QV + +K +K +R
Sbjct: 77 HRLMPLANTSA-------------SPARHPVRALILTPTRELADQVYESVKRYSKQTPLR 123
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG+ Q+ L+ E++V TPGRL + + E+ V L + VLDEADRM+
Sbjct: 124 SAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHV---EQKNVNLSQVGILVLDEADRML 180
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G +L+ II +LP +RQ L+FSAT +
Sbjct: 181 DMGFLPDLERIIRLLP------------------------AQRQGLLFSATFS 209
>gi|281209095|gb|EFA83270.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1070
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 128/267 (47%), Gaps = 56/267 (20%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
+VS G ++ ++E + + + + LH L K+I R GFK PTPIQ+ IP
Sbjct: 234 SVSFGGEEDDDESGKKKKKKISGGGFQSMELHKTLFKAIVRKGFKVPTPIQRKTIPLIL- 292
Query: 210 QGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALII 269
D++ A TGSGKT AF +P++Q+L E K G RA+I+
Sbjct: 293 -AGSDVVAMARTGSGKTAAFVVPMIQKLGEHSIKVGA------------------RAIIL 333
Query: 270 TPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 329
+PTRELA+Q +K+ G N+R +VGG S E Q L P+++V TPGRL
Sbjct: 334 SPTRELAIQTYKVVKDFTYGSNLRSCLVVGGDSMEDQFAELARNPDIIVATPGRLVH--- 390
Query: 330 GGEKHLVE----LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTC 385
HL E L T+ + V DEADR+ E G ++L I+ L
Sbjct: 391 ----HLQEVGMGLSTVQYIVFDEADRLFEMGFQQQLNDIVSKLS---------------- 430
Query: 386 VTVSSLQRKKRQTLVFSATI-ALSADF 411
RQTL+FSAT+ ++ DF
Sbjct: 431 --------DNRQTLLFSATLPSMLVDF 449
>gi|304315659|ref|YP_003850804.1| DEAD/DEAH box helicase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302777161|gb|ADL67720.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 514
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 130/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L+ ++K+I +GF+EP+ IQ IP QG D+IG AETG+GKTLA+G PI+
Sbjct: 3 FKELNLNEKILKAIDDMGFEEPSKIQSEVIPVLL-QGS-DVIGQAETGTGKTLAYGAPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ + +G + L++TPTRELA+QV D L + K VR+
Sbjct: 61 NNI--------------------GSNEGKVFCLVLTPTRELAIQVNDELARIGKYSKVRL 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG+ ++Q + +K ++++GTPGR+ +L+ ++ ++ L+ + + VLDEAD M++
Sbjct: 101 LPVYGGVQIDRQIKAIKRGVDIIIGTPGRVLDLI---KRDILRLNDVKYLVLDEADEMLD 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II N +N K+RQT++FSAT+
Sbjct: 158 MGFIDDIKEII------NHTN------------------KERQTMMFSATM 184
>gi|449547452|gb|EMD38420.1| hypothetical protein CERSUDRAFT_105018 [Ceriporiopsis subvermispora
B]
Length = 758
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 127/239 (53%), Gaps = 17/239 (7%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKT 226
+I +W E + +++ I ++G+KEP+PIQ+ IP DIIG AETGSGKT
Sbjct: 325 QIPHPLRSWKESIIPSEILEVIDKIGYKEPSPIQRQAIPIGLQNR--DIIGIAETGSGKT 382
Query: 227 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
AF +P++ + + L +E P ALI+ PTRELA Q+ K+
Sbjct: 383 AAFVIPMLSFISK--------LPPFTDEIRHLGPY----ALIMAPTRELAQQIESETKKF 430
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
A + V IVGG S E+Q+ L++ E+++ TPGRL +++ E+H++ L + V+
Sbjct: 431 AGPLGFTCVSIVGGRSVEEQQFNLRSGAEIIIATPGRLKDVI---ERHVIVLSQCRYVVM 487
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
DEADRM+ G +L I+D LP E Q EQ + + R T +FSAT+
Sbjct: 488 DEADRMVNLGFEVDLTFILDKLPSDTMEGEDQGEQMDVDGETMIKKGRNRVTTLFSATM 546
>gi|427413381|ref|ZP_18903573.1| hypothetical protein HMPREF9282_00980 [Veillonella ratti
ACS-216-V-Col6b]
gi|425716197|gb|EKU79183.1| hypothetical protein HMPREF9282_00980 [Veillonella ratti
ACS-216-V-Col6b]
Length = 523
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 127/237 (53%), Gaps = 55/237 (23%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
+ + EL++ +++++ +GF+EPTPIQK IP A +D+IG A+TG+GKT AFG+
Sbjct: 2 LEKFEELQISEPILRALNDMGFEEPTPIQKEAIPVA--MSGLDMIGQAQTGTGKTAAFGI 59
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA---LIITPTRELALQVTDHLKEVAK 288
P ++++ E HLRA LI++PTRELA+QV + L ++A+
Sbjct: 60 PALEQVDE-----------------------HLRAVQVLILSPTRELAIQVAEELNKMAQ 96
Query: 289 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
+++ +PI GG ++Q R L+ P+++V TPGRL + M G + + VLDE
Sbjct: 97 HTHIQALPIYGGQDIQRQFRSLRKNPQIIVATPGRLMDHMERGS---INFDNVKVIVLDE 153
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
AD M+ G ++ I+ +P ++RQTL+FSAT+
Sbjct: 154 ADEMLNMGFIDDINKILAAVP------------------------EQRQTLLFSATM 186
>gi|357040015|ref|ZP_09101805.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum gibsoniae
DSM 7213]
gi|355356995|gb|EHG04774.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum gibsoniae
DSM 7213]
Length = 482
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 130/243 (53%), Gaps = 54/243 (22%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+N+ L ++K++ +GF+E TPIQ+ IP QG+ D+IG A TG+GKT AFG+P+
Sbjct: 3 VFNDFGLTEPVIKALNNMGFEEATPIQERAIPVGL-QGR-DLIGQAHTGTGKTAAFGIPL 60
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
M+ L RE +++ +++TPTRELA+QV + L ++ + +R
Sbjct: 61 MEILQVRRE--------------------YIQGVVLTPTRELAVQVAEELNKLGQYKGIR 100
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+PI GG +Q R LK RP ++VGTPGRL + M + + L+ +S VLDEAD M+
Sbjct: 101 TLPIYGGQDINRQIRALKKRPHIIVGTPGRLMDHM---RRKTIRLNQVSMVVLDEADEML 157
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALS 408
G ++++I+ +P +RQT++FSAT+ AL+
Sbjct: 158 NMGFIEDIENILKDIP------------------------AERQTMLFSATMPAPIRALA 193
Query: 409 ADF 411
F
Sbjct: 194 GRF 196
>gi|300121162|emb|CBK21543.2| unnamed protein product [Blastocystis hominis]
Length = 627
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 122/232 (52%), Gaps = 45/232 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++N+LRL L++++ +GF PTPIQ CIP A GK DI AA+TGSGKT A+ LPI
Sbjct: 171 SFNQLRLSRPLLRAVNEMGFTTPTPIQARCIPLAL-AGK-DICAAAKTGSGKTAAYLLPI 228
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
++RLL K + +R LI+ PTRELA QV ++ K ++
Sbjct: 229 LERLLY-----------------KNNAQNLIRVLIVAPTRELAQQVHTIATKLTKYTSIT 271
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+VGG+ + Q L+ RP++VV TPGR+ + + V+L + +LDEADR++
Sbjct: 272 CCLVVGGLPLQAQAVDLQRRPDIVVCTPGRMIDHVHNSMS--VDLDDVEVVILDEADRLL 329
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
E G EL ++ + P+ KRQTL+FSAT+
Sbjct: 330 ELGFTEELHELLRLCPV------------------------KRQTLLFSATM 357
>gi|380004252|gb|AFD28589.1| vasa protein, partial [Clytia hemisphaerica]
Length = 488
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 140/261 (53%), Gaps = 40/261 (15%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
D+ E+ E+ T ++ E L P ++++I + + +PTP+QK +PA K D+
Sbjct: 24 DNIPVEITGPGEMPTAVRSFEEAGLAPGVLENIKKAKYTKPTPVQKYALPAVL--AKRDL 81
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 275
+ A+TGSGKT AF LP++ +LE R++ L +E AP AL+I PTREL
Sbjct: 82 MACAQTGSGKTAAFLLPVLTGILEHRDEFTSQL------SEVQAPI----ALVIAPTREL 131
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
A Q+ + ++ + G ++R V + GG+S Q R ++A L++GTPGRL + M +
Sbjct: 132 ATQIFNEARKFSHGTSIRPVVVYGGVSVAHQLRQVEAGCHLLIGTPGRLKDFMG---RRK 188
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
+ L L + VLDEADRM++ G ++++I+ M ++++
Sbjct: 189 ITLENLKYLVLDEADRMLDMGFMPDVKTIVSDFNMP--------------------EKEE 228
Query: 396 RQTLVFSATIA-----LSADF 411
R TL+FSAT L++DF
Sbjct: 229 RHTLMFSATFPEQIQKLASDF 249
>gi|255534886|ref|YP_003095257.1| ATP-dependent RNA helicase RhlE [Flavobacteriaceae bacterium
3519-10]
gi|255341082|gb|ACU07195.1| ATP-dependent RNA helicase RhlE [Flavobacteriaceae bacterium
3519-10]
Length = 417
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 121/231 (52%), Gaps = 46/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L + K++ G+ +PTPIQ IP+ QG+ D++G A+TG+GKT AF +PI+
Sbjct: 3 FTDLQLIDPIAKALQEEGYTQPTPIQAKAIPSIL-QGR-DLLGTAQTGTGKTAAFAIPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L EK ++ALI+TPTRELA+Q+ + + + +R
Sbjct: 61 QNL-----------------TEKNIRNNQIKALILTPTRELAIQIEESFNAYGRHLRLRN 103
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ + GG+ QE LK +++V TPGRL + +S G ++ L L FVLDEADRM++
Sbjct: 104 LVVFGGVKQSGQEAALKKGVDILVATPGRLLDFISQG---IISLKNLEIFVLDEADRMLD 160
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II +LP KRQTL FSAT
Sbjct: 161 MGFVHDVKRIIKLLP------------------------PKRQTLFFSATF 187
>gi|213408188|ref|XP_002174865.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
gi|212002912|gb|EEB08572.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
Length = 730
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 125/239 (52%), Gaps = 49/239 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ +++L +++ + L F++PTPIQ IP A GK DI+GAA TGSGKT AF +PI
Sbjct: 232 SFQDMKLSRPILRGLSSLNFEDPTPIQSKTIPVAL-LGK-DIVGAAVTGSGKTAAFVVPI 289
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGIN 291
++RL+ Y PK R LII PTRELA+Q + K +A +
Sbjct: 290 LERLV-------------------YRPKKIPTSRVLIICPTRELAMQCHNVAKRIAAFTD 330
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ + VGG+S + QE+ L+ RP++++ TPGR + + + V+ + V+DEADR
Sbjct: 331 ITLCLCVGGLSLKVQEQELRKRPDIIIATPGRFIDHVRNSQGFSVD--NIEIMVIDEADR 388
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
M+E+G EL I+ + P K RQT++FSAT+ D
Sbjct: 389 MLEDGFADELNEIVKLCP------------------------KSRQTMLFSATMTEKVD 423
>gi|397662367|ref|YP_006503067.1| ATP-dependent rna helicase [Taylorella equigenitalis ATCC 35865]
gi|394350546|gb|AFN36460.1| ATP-dependent rna helicase [Taylorella equigenitalis ATCC 35865]
Length = 581
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 126/239 (52%), Gaps = 37/239 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L + L+KS+ R+ F+ PT +Q IP A +GK D+I +A+TGSGKT AF LP +
Sbjct: 6 FADLGIEQTLLKSLERIDFRNPTEVQVKSIPLAL-KGK-DLIVSAQTGSGKTAAFMLPSI 63
Query: 235 QRLLEEREK-------AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
Q+LL E E A K +++ +E PK ++ L++TPTRELA+QV+D KE
Sbjct: 64 QQLLHELETRPAPEQIASKSSKQRKRRSEANPPKYGVQILVLTPTRELAMQVSDATKEFI 123
Query: 288 KGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
G V + +VGGM+ Q L E+VV TPGRL + + G V L L +L
Sbjct: 124 YGFKGVHIATLVGGMAYGPQINSLSREVEIVVATPGRLLDHIKAGR---VNLRNLKILIL 180
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
DEADRM++ G ++ +++ P RQTL+FSAT
Sbjct: 181 DEADRMLDMGFIHDINNVVAETP------------------------DDRQTLLFSATF 215
>gi|390933807|ref|YP_006391312.1| DEAD/DEAH box helicase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569308|gb|AFK85713.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 513
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 129/231 (55%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L+ ++K+I +GF+EP+ IQ IP +D+IG AETG+GKTLA+G PI+
Sbjct: 3 FKELNLNEKILKAIDDMGFEEPSKIQSEVIPVLLEG--LDVIGQAETGTGKTLAYGAPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ G + LI+TPTRELA+QV D L + K VR+
Sbjct: 61 NNF--------------------SSNDGKVFCLILTPTRELAIQVNDELARIGKYSKVRL 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG+ ++Q + +K ++VVGTPGR+ +L+ ++++++L ++ + V+DEAD M++
Sbjct: 101 LPVYGGVQIDRQIKAIKRGVDIVVGTPGRVLDLI---KRNVLDLKSVRYLVIDEADEMLD 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ II N +N ++RQT++FSAT+
Sbjct: 158 MGFIDDIKEII------NHTN------------------RERQTMMFSATM 184
>gi|380021885|ref|XP_003694787.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Apis florea]
Length = 788
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 141/233 (60%), Gaps = 17/233 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E ++ I ++G+K+ TPIQ+ IP DIIG AETGSGKTLAF +P+
Sbjct: 361 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNR--DIIGVAETGSGKTLAFLIPL 418
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 419 LLWITS----LPKI--ERLEEADQ-GP----YSIILAPTRELAQQIEEETNKFGQPLGIR 467
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI
Sbjct: 468 TVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMI 524
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 525 DMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 577
>gi|339444851|ref|YP_004710855.1| hypothetical protein EGYY_12990 [Eggerthella sp. YY7918]
gi|338904603|dbj|BAK44454.1| hypothetical protein EGYY_12990 [Eggerthella sp. YY7918]
Length = 418
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 126/231 (54%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L L + ++ RLGF EPTP+Q+ IP G+ D++ AA+TG+GKT AF LP++
Sbjct: 5 FEDLGLSEATLSTVARLGFTEPTPVQQQAIPLVL-AGR-DVVAAAKTGTGKTAAFALPLI 62
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+RL G+EA++ G R L++TPTRELA Q+ ++ +G VRV
Sbjct: 63 ERL-------------AGDEAKRR--PGSPRVLVVTPTRELAQQIDAACSDMTRGSRVRV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ +VGGM + Q L ++++ TPGRL++LM G+ L + TL VLDEADRM++
Sbjct: 108 LSVVGGMPYKGQIARLNKGIDILIATPGRLFDLMQRGDVKLDRVETL---VLDEADRMLD 164
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G + ++ I+ P + RQTL+FSATI
Sbjct: 165 MGFWPTMKKIVAATPAS------------------------RQTLLFSATI 191
>gi|265754229|ref|ZP_06089418.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 3_1_33FAA]
gi|423241599|ref|ZP_17222711.1| hypothetical protein HMPREF1065_03334 [Bacteroides dorei
CL03T12C01]
gi|263234938|gb|EEZ20493.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 3_1_33FAA]
gi|392641052|gb|EIY34840.1| hypothetical protein HMPREF1065_03334 [Bacteroides dorei
CL03T12C01]
Length = 434
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 125/231 (54%), Gaps = 47/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K++ + G+ PTPIQ+ IP +GK D++G A+TG+GKT AF +P++
Sbjct: 3 FKELDLIEPILKALQQTGYTTPTPIQEQAIPVLL-KGK-DLLGCAQTGTGKTAAFAIPLI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRL + K G ++ALI+TPTRELA+Q+ ++ + AK V+
Sbjct: 61 QRLYQSDHKKG------------------IKALILTPTRELAIQIGENFDQYAKYTGVKH 102
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ + Q LK ++++ TPGRL +L S G + L L +FVLDEADRM++
Sbjct: 103 AVIFGGVPQKAQVDALKRGVQVLIATPGRLLDLQSQG---CISLKGLEYFVLDEADRMLD 159
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ ++ ++P +RQTL FSAT+
Sbjct: 160 MGFIHDIKKVLKLIPA------------------------RRQTLFFSATM 186
>gi|378728301|gb|EHY54760.1| adenosinetriphosphatase [Exophiala dermatitidis NIH/UT8656]
Length = 813
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 120/239 (50%), Gaps = 49/239 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ + L ++K++ L F PTPIQ IP A QG +D++G+A TGSGKT AF LPI
Sbjct: 287 SFQQFSLSRPILKALAALSFTAPTPIQARAIPVAL-QG-LDVVGSAVTGSGKTAAFLLPI 344
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGIN 291
++RLL Y P+ R I+ PTRELA+Q + +A+ +
Sbjct: 345 LERLL-------------------YRPRKVPTTRVAILMPTRELAVQCYNVATALARFTD 385
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
+ +VGG +QE +LK RP++V+ TPGR + M +VE + VLDEADR
Sbjct: 386 ITFAQVVGGFPLREQEAILKKRPDVVIATPGRFIDHMRNSASFVVE--NIEILVLDEADR 443
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
M+E G EL I+ +P K RQT++FSAT+ S D
Sbjct: 444 MLETGFEDELNEILKTIP------------------------KGRQTMLFSATMTDSVD 478
>gi|254578822|ref|XP_002495397.1| ZYRO0B10318p [Zygosaccharomyces rouxii]
gi|238938287|emb|CAR26464.1| ZYRO0B10318p [Zygosaccharomyces rouxii]
Length = 750
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 125/235 (53%), Gaps = 46/235 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGL 231
F+ +N L L ++K++ LG+ P+PIQ A IP A GK DII A TGSGKT AF +
Sbjct: 236 FNNFNSLSLSRPVLKALGDLGYATPSPIQGATIPIALL-GK-DIIAGAVTGSGKTAAFMI 293
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
PI++RL+ K A R +++ PTRELA+QV D K++ K +N
Sbjct: 294 PIIERLIY-----------------KPAKVASTRVIVLAPTRELAIQVADVGKKLGKYVN 336
Query: 292 VRVVPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
I VGG++ +QE++LK RP++V+ TPGR + + V+ ++ V+DEAD
Sbjct: 337 GLTFGIAVGGLNLRQQEQILKTRPDIVIATPGRFIDHIRNSSSFNVD--SVEVLVIDEAD 394
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
RM+E G E+ I+ +LP KRQT++FSAT+
Sbjct: 395 RMLEEGFQDEINEIMHLLP------------------------SKRQTMLFSATM 425
>gi|209543288|ref|YP_002275517.1| DEAD/DEAH box helicase [Gluconacetobacter diazotrophicus PAl 5]
gi|209530965|gb|ACI50902.1| DEAD/DEAH box helicase domain protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 596
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 145/282 (51%), Gaps = 60/282 (21%)
Query: 181 HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEE 240
HP L +++ G++EPTP+QKA + AA G+ D++ +A+TGSGKT+AFGL + LL
Sbjct: 7 HPALRRALDARGYEEPTPVQKAVLDVAA-DGR-DLLVSAQTGSGKTVAFGLAMADTLLGG 64
Query: 241 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGG 300
AE++ P G A+II PTRELA+QV L + R+V +GG
Sbjct: 65 --------------AERFGPAGAPLAVIIAPTRELAMQVQRELSWLYAPAGARIVSCIGG 110
Query: 301 MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 360
M ++ R L+ +VVGTPGRL + S G L EL + VLDEAD M++ G E
Sbjct: 111 MDARREARALEIGAHIVVGTPGRLCDHQSRGRLVLSELRVV---VLDEADEMLDLGFRDE 167
Query: 361 LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS-ADFRKKLKHGS 419
LQ ++D +P T R+TL+FSATIA A ++ + +
Sbjct: 168 LQQLLDAMPDT------------------------RRTLLFSATIAKDIATLARRYQRDA 203
Query: 420 LKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLE 461
L+ I+TLS G R + D+T +V+A+ E
Sbjct: 204 LR----------IDTLS---GARQH---ADITYRAVMADPRE 229
>gi|73667695|ref|YP_303710.1| ATP-dependent RNA helicase [Methanosarcina barkeri str. Fusaro]
gi|72394857|gb|AAZ69130.1| ATP-dependent RNA helicase [Methanosarcina barkeri str. Fusaro]
Length = 579
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 119/191 (62%), Gaps = 24/191 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ L L ++K++ + GF+EPTPIQ+ IP +G+ DIIG A+TG+GKT AFG PI+
Sbjct: 7 FKALGLSDSMLKALKKKGFEEPTPIQEKVIPLFL-KGECDIIGQAQTGTGKTTAFGAPII 65
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+++ EK+GK ++A+++TPTRELA+QV++ L + + +
Sbjct: 66 EKI---PEKSGK-----------------VQAIVLTPTRELAIQVSEELNSLKGDKKLHI 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
VPI GG S +Q R+LK+ ++VVGTPGR+ + + E+ + L +++FVLDEAD M+
Sbjct: 106 VPIYGGQSMTQQFRMLKSGVDIVVGTPGRVIDHL---ERKSLNLENIAYFVLDEADEMLN 162
Query: 355 NGHFRELQSII 365
G +++ I+
Sbjct: 163 MGFIDDIKEIL 173
>gi|121707307|ref|XP_001271794.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143359800|sp|A1CHL3.1|PRP28_ASPCL RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|119399942|gb|EAW10368.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 798
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 139/249 (55%), Gaps = 21/249 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E L L++ + R+G+KEPTPIQ+A IP A D+IG A TGSGKT +F LP+
Sbjct: 367 SWEESGLPKRLLELVDRVGYKEPTPIQRAAIPIALQSR--DLIGVAVTGSGKTASFLLPL 424
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + E + +E E G A+++ PTRELA Q+ K+ + +
Sbjct: 425 LVYIAEL---------PRIDEFEWRKNDGPY-AIVLAPTRELAQQIEIEAKKFTQPLGFN 474
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI
Sbjct: 475 VVSIVGGHSLEEQAYSLRNGAEIIIATPGRLVDCI---ERRILVLSQCCYIIMDEADRMI 531
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSADF 411
+ G + I+D LP+TN + S++ + + S + RQT++++AT+ A+
Sbjct: 532 DLGFEEPVNKILDALPVTN--EKPDSDEAENSAAMRS--HRYRQTMMYTATMPSAVERIA 587
Query: 412 RKKLKHGSL 420
RK L+ ++
Sbjct: 588 RKYLRRPAI 596
>gi|212692656|ref|ZP_03300784.1| hypothetical protein BACDOR_02153 [Bacteroides dorei DSM 17855]
gi|237709374|ref|ZP_04539855.1| ATP-dependent RNA helicase [Bacteroides sp. 9_1_42FAA]
gi|265754557|ref|ZP_06089609.1| ATP-dependent RNA helicase [Bacteroides sp. 3_1_33FAA]
gi|345514379|ref|ZP_08793890.1| ATP-dependent RNA helicase [Bacteroides dorei 5_1_36/D4]
gi|423230441|ref|ZP_17216845.1| hypothetical protein HMPREF1063_02665 [Bacteroides dorei
CL02T00C15]
gi|423240913|ref|ZP_17222027.1| hypothetical protein HMPREF1065_02650 [Bacteroides dorei
CL03T12C01]
gi|423244150|ref|ZP_17225225.1| hypothetical protein HMPREF1064_01431 [Bacteroides dorei
CL02T12C06]
gi|212664734|gb|EEB25306.1| DEAD/DEAH box helicase [Bacteroides dorei DSM 17855]
gi|229436798|gb|EEO46875.1| ATP-dependent RNA helicase [Bacteroides dorei 5_1_36/D4]
gi|229456430|gb|EEO62151.1| ATP-dependent RNA helicase [Bacteroides sp. 9_1_42FAA]
gi|263234671|gb|EEZ20239.1| ATP-dependent RNA helicase [Bacteroides sp. 3_1_33FAA]
gi|392630976|gb|EIY24955.1| hypothetical protein HMPREF1063_02665 [Bacteroides dorei
CL02T00C15]
gi|392642704|gb|EIY36467.1| hypothetical protein HMPREF1064_01431 [Bacteroides dorei
CL02T12C06]
gi|392642975|gb|EIY36733.1| hypothetical protein HMPREF1065_02650 [Bacteroides dorei
CL03T12C01]
Length = 624
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 128/233 (54%), Gaps = 49/233 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + P ++K+I +G++ P P+Q+ IP G D++ A+TG+GKT AFGLP++
Sbjct: 4 FEELGVSPEILKAIKEMGYENPMPVQEEVIPYLLGNGN-DVVALAQTGTGKTAAFGLPLI 62
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-VR 293
Q++ E +K P+ ALI+ PTREL LQ+ L + +K I+ ++
Sbjct: 63 QKI----------------EVKKRVPQ----ALILCPTRELCLQIAGDLNDYSKYIDGLK 102
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V+P+ GG S E Q R+LKA ++V TPGRL +LM E+ + +L T++ V+DEAD M+
Sbjct: 103 VLPVYGGSSIESQIRMLKAGVHIIVATPGRLIDLM---ERKVAKLETIADVVMDEADEML 159
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
G + +I++ +P + R TL+FSAT++
Sbjct: 160 NMGFTDSINAILEKVP------------------------EDRNTLMFSATMS 188
>gi|423229947|ref|ZP_17216352.1| hypothetical protein HMPREF1063_02172 [Bacteroides dorei
CL02T00C15]
gi|423247037|ref|ZP_17228088.1| hypothetical protein HMPREF1064_04294 [Bacteroides dorei
CL02T12C06]
gi|392632157|gb|EIY26120.1| hypothetical protein HMPREF1063_02172 [Bacteroides dorei
CL02T00C15]
gi|392633650|gb|EIY27591.1| hypothetical protein HMPREF1064_04294 [Bacteroides dorei
CL02T12C06]
Length = 434
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 125/231 (54%), Gaps = 47/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K++ + G+ PTPIQ+ IP +GK D++G A+TG+GKT AF +P++
Sbjct: 3 FKELDLIEPILKALQQTGYTTPTPIQEQAIPVLL-KGK-DLLGCAQTGTGKTAAFAIPLI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRL + K G ++ALI+TPTRELA+Q+ ++ + AK V+
Sbjct: 61 QRLYQSDHKKG------------------IKALILTPTRELAIQIGENFDQYAKYTGVKH 102
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ + Q LK ++++ TPGRL +L S G + L L +FVLDEADRM++
Sbjct: 103 AVIFGGVPQKAQVDALKRGVQVLIATPGRLLDLQSQG---CISLKGLEYFVLDEADRMLD 159
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ ++ ++P +RQTL FSAT+
Sbjct: 160 MGFIHDIKKVLKLIPA------------------------RRQTLFFSATM 186
>gi|190702284|gb|ACE75181.1| ATP-dependent RNA helicase [Glyptapanteles flavicoxis]
Length = 796
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 141/233 (60%), Gaps = 17/233 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E ++ I ++G+K+ TPIQ+ IP DIIG AETGSGKTLAF +P+
Sbjct: 369 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNR--DIIGVAETGSGKTLAFLIPL 426
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 427 LLWITS----LPKI--ERLEEADQ-GPY----SIILAPTRELAQQIEEETNKFGQPLGIR 475
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI
Sbjct: 476 TVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMI 532
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 533 DMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 585
>gi|167622911|ref|YP_001673205.1| DEAD/DEAH box helicase [Shewanella halifaxensis HAW-EB4]
gi|167352933|gb|ABZ75546.1| DEAD/DEAH box helicase domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 432
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 127/236 (53%), Gaps = 52/236 (22%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ P ++++I G+++ TPIQ+ IPA +G+ D++ +A+TG+GKT AF LPI+
Sbjct: 3 FESFSFAPEILRAISECGYEKMTPIQQQAIPAV-RRGQ-DVLASAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q++L+ G+ + RALI+TPTRELA Q+ D++ + AK ++++V
Sbjct: 61 QKMLDNPSTTGR---------------SNARALILTPTRELAAQIADNINDYAKYLDMKV 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV----ELHTLSFFVLDEAD 350
V ++GG+ + Q LK ++++ TPGRL E H+V L + F VLDEAD
Sbjct: 106 VTVLGGVKMDSQATKLKRGADIIIATPGRLLE-------HIVACNLSLSNVDFLVLDEAD 158
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
RM++ G ++Q I+ + KKRQ L+FSAT +
Sbjct: 159 RMLDMGFSADIQKILQAV------------------------NKKRQNLLFSATFS 190
>gi|399114783|emb|CCG17579.1| ATP-dependent rna helicase [Taylorella equigenitalis 14/56]
Length = 581
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 126/239 (52%), Gaps = 37/239 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L + L+KS+ R+ F+ PT +Q IP A +GK D+I +A+TGSGKT AF LP +
Sbjct: 6 FADLGIEQTLLKSLERIDFRNPTEVQVKSIPLAL-KGK-DLIVSAQTGSGKTAAFMLPSI 63
Query: 235 QRLLEEREK-------AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
Q+LL E E A K +++ +E PK ++ L++TPTRELA+QV+D KE
Sbjct: 64 QQLLHELETRPAPEQIASKSSKQRKRRSEANPPKYGVQILVLTPTRELAMQVSDATKEFI 123
Query: 288 KGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
G V + +VGGM+ Q L E+VV TPGRL + + G V L L +L
Sbjct: 124 YGFKGVHIATLVGGMAYGPQINSLSREVEIVVATPGRLLDHIKAGR---VNLRNLKILIL 180
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
DEADRM++ G ++ +++ P RQTL+FSAT
Sbjct: 181 DEADRMLDMGFIHDINNVVAETP------------------------DDRQTLLFSATF 215
>gi|255942831|ref|XP_002562184.1| Pc18g03460 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586917|emb|CAP94570.1| Pc18g03460 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 790
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 153/271 (56%), Gaps = 25/271 (9%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E L L++ + R+G+K+PT IQ+A IP A D+IG A TGSGKT AF LP+
Sbjct: 358 SWEESSLPKRLLELVERVGYKDPTAIQRAAIPIAMQS--RDLIGVAVTGSGKTAAFLLPL 415
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + A L+E E + P A+++ PTRELA Q+ K+ + +
Sbjct: 416 LVYI-----SALPRLDEN-EWRKNEGPY----AIVLAPTRELAQQIEIEAKKFTQPLGFN 465
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI
Sbjct: 466 VVSIVGGHSLEEQAFSLRNGAEIIIATPGRLVDCI---ERRMLVLSQCCYVIMDEADRMI 522
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD--F 411
+ G + I+D LP+TN + +E+ + + +S Q + RQT++++AT+ + +
Sbjct: 523 DLGFEEPVNKILDALPVTN--EKPDTEEAENSMAMS--QHQYRQTMMYTATMPAAVERIA 578
Query: 412 RKKLKHGSLKLKQSVNGLN-SIETLSERAGM 441
RK L+ ++ ++ G+ +++T+ +R M
Sbjct: 579 RKYLRRPAII---TIGGVGEAVDTVEQRVEM 606
>gi|329906289|ref|ZP_08274385.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
gi|327547309|gb|EGF32148.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
Length = 504
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 131/251 (52%), Gaps = 46/251 (18%)
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDII 216
D + + V ++E + F+ + L +++++ G+ PTPIQ A IP QG+ D++
Sbjct: 3 DIQTDAVPDSEPALRFEDFG---LSAEILRALADQGYDHPTPIQAAAIPVVL-QGR-DVM 57
Query: 217 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTREL 275
GAA+TG+GKT F LPI+Q LL + +P H +RALI+TPTREL
Sbjct: 58 GAAQTGTGKTAGFSLPIIQLLL-------------ANASNSASPARHPVRALILTPTREL 104
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
A QV +++K + +R + GGM Q L+A E+V+ TPGRL + + ++
Sbjct: 105 ADQVAENVKAYCRHTPLRSTVVFGGMDMAPQTAALRAGVEIVIATPGRLLDHV---QQKT 161
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
+ L V+DEADRM++ G +LQ II++LP KK
Sbjct: 162 LNLSQTQILVMDEADRMLDMGFLPDLQRIINLLP------------------------KK 197
Query: 396 RQTLVFSATIA 406
RQ L+FSAT +
Sbjct: 198 RQNLMFSATFS 208
>gi|223944961|gb|ACN26564.1| unknown [Zea mays]
gi|413933312|gb|AFW67863.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 734
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 24/231 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E +L L+++I + G+++P+PIQ A IP Q D+IG AETGSGKT AF LP++
Sbjct: 315 WSESKLGTELLRAIDKAGYEKPSPIQMAAIPLGLQQR--DVIGIAETGSGKTAAFVLPML 372
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ L EE E P A+++ PTRELA Q+ + + A + ++V
Sbjct: 373 SYITR--------LPPISEENEAEGPY----AVVMAPTRELAQQIEEETVKFATYLGLKV 420
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VLDEADRMI+
Sbjct: 421 VSIVGGQSIEEQGFKIRQGCEIVIATPGRLLDCL---ERRYAVLNQCNYVVLDEADRMID 477
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++ ++D +P +N E + E+ +R R T +FSAT+
Sbjct: 478 MGFEPQVVGVLDAMPSSNLKPENEDEELDE-------KRIYRTTYMFSATM 521
>gi|212690559|ref|ZP_03298687.1| hypothetical protein BACDOR_00044 [Bacteroides dorei DSM 17855]
gi|212666908|gb|EEB27480.1| DEAD/DEAH box helicase [Bacteroides dorei DSM 17855]
Length = 434
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 125/231 (54%), Gaps = 47/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K++ + G+ PTPIQ+ IP +GK D++G A+TG+GKT AF +P++
Sbjct: 3 FKELDLIEPILKALQQTGYTTPTPIQEQAIPVLL-KGK-DLLGCAQTGTGKTAAFAIPLI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRL + K G ++ALI+TPTRELA+Q+ ++ + AK V+
Sbjct: 61 QRLYQSDHKKG------------------IKALILTPTRELAIQIGENFDQYAKYTGVKH 102
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ + Q LK ++++ TPGRL +L S G + L L +FVLDEADRM++
Sbjct: 103 AVIFGGVPQKAQVDALKRGVQVLIATPGRLLDLQSQG---CISLKGLEYFVLDEADRMLD 159
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ ++ ++P +RQTL FSAT+
Sbjct: 160 MGFIHDIKKVLKLIPA------------------------RRQTLFFSATM 186
>gi|348502929|ref|XP_003439019.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Oreochromis
niloticus]
Length = 806
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 131/233 (56%), Gaps = 18/233 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L +++ I + G+K+PTPIQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 379 WKEYPLPAHILEVIDKCGYKDPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFLIPLL 436
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K ++ E P A+I+ PTRELA Q+ + + K + +R
Sbjct: 437 V-WITTLPKIDRI------EDSDQGPY----AVILAPTRELAQQIEEETIKFGKPLGIRT 485
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 486 VAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDEADRMID 542
Query: 355 NGHFRELQSIIDMLPMTNG--SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++Q I++ +P+TN E + + + S + K RQT++F+AT+
Sbjct: 543 MGFEPDVQKILEYIPVTNQKPDTEEAEDPEKMTMNFESGKHKYRQTVMFTATM 595
>gi|295696219|ref|YP_003589457.1| DEAD/DEAH box helicase [Kyrpidia tusciae DSM 2912]
gi|295411821|gb|ADG06313.1| DEAD/DEAH box helicase domain protein [Kyrpidia tusciae DSM 2912]
Length = 526
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 154/288 (53%), Gaps = 57/288 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + +L + ++I +GF+EP+PIQ ACIP QGK D+IG A+TG+GKT AFG+PI+
Sbjct: 4 FTDFQLSRRVQQAIDDMGFEEPSPIQAACIPLVL-QGK-DVIGQAQTGTGKTAAFGVPII 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ + R H++ALI+TPTRELA+QV L+++AK VR
Sbjct: 62 EMMGTGR---------------------HVQALILTPTRELAIQVAGELRKIAKYARVRT 100
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG S Q R L+ +V+GTPGR+ + + G L ++ T+ VLDEAD M++
Sbjct: 101 LPIYGGQSIGHQIRALQQGVGVVIGTPGRVLDHLRRGTLKLDKVRTV---VLDEADEMLD 157
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G ++++I+ P ++RQTL+FSAT L+
Sbjct: 158 MGFIEDIEAILKETP------------------------QERQTLLFSATFPHEVKQLAV 193
Query: 410 DFRKKLKHGSL-KLKQSVNGLNSIET-LSERAGMRANVAIVDLTNVSV 455
+ K +H ++ + + +V ++ I + ER + + I+D +VS+
Sbjct: 194 RYMKNPEHVTVNRGEMTVPLIDQIYYKVLERNKLESLCRIIDSEDVSL 241
>gi|330831232|ref|YP_004394184.1| DEAD box family ATP-dependent RNA helicase [Aeromonas veronii B565]
gi|423208115|ref|ZP_17194669.1| hypothetical protein HMPREF1169_00187 [Aeromonas veronii AER397]
gi|328806368|gb|AEB51567.1| ATP-dependent RNA helicase, DEAD box family [Aeromonas veronii
B565]
gi|404619162|gb|EKB16078.1| hypothetical protein HMPREF1169_00187 [Aeromonas veronii AER397]
Length = 406
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 143/261 (54%), Gaps = 57/261 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA-AHQGKVDIIGAAETGSGKTLAFGLPI 233
++EL LHP L+ S+ + + PT IQ+ IPAA A Q D++ A+TGSGKTLAFGLP+
Sbjct: 3 FSELALHPDLLASLP-VTLQTPTRIQQLAIPAALAGQ---DLLALAQTGSGKTLAFGLPL 58
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+QRL ++ L++ PTRELA+QVT LKE A+ + +R
Sbjct: 59 LQRL--------------------DPASSQVQGLVLVPTRELAIQVTAALKEGAEALGLR 98
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+V + GG++ E+Q+ L P+L+V TPGRL +L++ + ++ L L VLDEADR++
Sbjct: 99 IVTLCGGVAQERQQAELALGPQLLVATPGRLRDLLT---QQVLGLDGLQLLVLDEADRLL 155
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 413
E G ++++++ +P RQTL+FSAT L A+ +
Sbjct: 156 EMGFAPDIKALLGFIP------------------------ADRQTLLFSAT--LPAEL-E 188
Query: 414 KLKHGSLK--LKQSVNGLNSI 432
L +G L+ + N LNS+
Sbjct: 189 TLANGLLREPTRIEANPLNSV 209
>gi|422322840|ref|ZP_16403880.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
gi|317402151|gb|EFV82742.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
Length = 481
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 125/233 (53%), Gaps = 43/233 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++ LHPLL++SI G+ PTPIQ IP +G+ D++GAA+TG+GKT AF LPI+
Sbjct: 20 FSDFGLHPLLLQSIAETGYTTPTPIQAQAIPVVV-EGR-DVMGAAQTGTGKTAAFTLPIL 77
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
RL+ + +P H +RALI+TPTRELA QV + +K +K +R
Sbjct: 78 HRLMPLANTSA-------------SPARHPVRALILTPTRELADQVYESVKRYSKQTPLR 124
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG+ Q+ L+ E++V TPGRL + + E+ V L + VLDEADRM+
Sbjct: 125 SAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHV---EQKNVNLSQVGILVLDEADRML 181
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G +L+ II +LP +RQ L+FSAT +
Sbjct: 182 DMGFLPDLERIIRLLP------------------------AQRQGLLFSATFS 210
>gi|378823723|ref|ZP_09846322.1| putative ATP-dependent RNA helicase RhlE [Sutterella parvirubra YIT
11816]
gi|378597462|gb|EHY30751.1| putative ATP-dependent RNA helicase RhlE [Sutterella parvirubra YIT
11816]
Length = 639
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 126/238 (52%), Gaps = 46/238 (19%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
T F+++ L P ++ +I R+G+ EPTPIQ IP G D++GAA+TG+GKT F
Sbjct: 2 TSFESFG---LDPRILSAIARMGYSEPTPIQTQAIPVVLKGG--DVMGAAQTGTGKTAGF 56
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAK 288
GLP++ R+L + + +P H +RALI+TPTRELA QV+D+L A
Sbjct: 57 GLPLLARILPKANTS-------------MSPARHPVRALILTPTRELADQVSDNLTAYAA 103
Query: 289 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 348
+RV + GG+ Q +L+ E++ TPGRL + ++ + V L + VLDE
Sbjct: 104 DTPLRVGVVYGGVDIRPQADMLRRGIEVLTATPGRLLDHVA---QKSVNLSQVEIVVLDE 160
Query: 349 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
ADRM++ G ++ I+ +LP K RQ+L+FSAT +
Sbjct: 161 ADRMLDMGFLPDISRILQLLP------------------------KTRQSLMFSATFS 194
>gi|357128412|ref|XP_003565867.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
21-like [Brachypodium distachyon]
Length = 675
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 133/235 (56%), Gaps = 19/235 (8%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L L++++ G+ PTPIQ A +P + D+IG A+TGSGKT AF LP++
Sbjct: 225 WAESALGEPLLRAVAMAGYATPTPIQMAAVPLGLR--RRDLIGVAQTGSGKTAAFVLPML 282
Query: 235 QRLLEEREKAGKMLEEKGE-EAEKYAPKGHLRALIITPTRELALQV---TDHLKEVAKGI 290
++ M+ +GE + + + P+G A+++ PTRELA Q+ T L A
Sbjct: 283 AYIMNLMTSPPPMIMSRGEADDDVHDPQGPY-AVVMAPTRELAQQIERETTKLAAAACHG 341
Query: 291 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 350
+++VV +VGG E+Q ++ E++V TPGRL + + +HLV L+ S+ VLDEAD
Sbjct: 342 SIKVVSVVGGQPIEEQAFRIRQGCEVIVATPGRLLDCLE--RRHLV-LNRCSYVVLDEAD 398
Query: 351 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
RM++ G ++ S++D +P +N E ++E+ + R T +FSAT+
Sbjct: 399 RMVDMGFEPQVASVLDAMPTSNLKPENEAEEQKNVY---------RTTHMFSATM 444
>gi|307201507|gb|EFN81270.1| Probable ATP-dependent RNA helicase DDX23 [Harpegnathos saltator]
Length = 679
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 141/233 (60%), Gaps = 17/233 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E ++ I ++G+K+ TPIQ+ IP DIIG AETGSGKTLAF +P+
Sbjct: 252 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNR--DIIGVAETGSGKTLAFLIPL 309
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 310 LLWITS----LPKI--ERLEEADQ-GP----YSIILAPTRELAQQIEEETNKFGQPLGIR 358
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI
Sbjct: 359 TVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMI 415
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 416 DMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 468
>gi|345567391|gb|EGX50323.1| hypothetical protein AOL_s00076g87 [Arthrobotrys oligospora ATCC
24927]
Length = 791
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 141/258 (54%), Gaps = 24/258 (9%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W E L +L+ I+ +G+K+P+PIQ+A IP A D+IG A TGSGKT
Sbjct: 338 IPNPMRSWKESSLPQVLLDVIHSVGYKDPSPIQRAAIPIALRSR--DVIGVAVTGSGKTA 395
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
+F LP++ + K L+ + YA +I+ PTRELA Q+ + A
Sbjct: 396 SFILPLLVYI-----KDLPPLDNITKHDGPYA-------MILAPTRELAQQIEVEAAKFA 443
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+N R V IVGG S E+Q LK E+V+ TPGRL + + E+ ++ L + ++D
Sbjct: 444 DPLNFRCVSIVGGHSIEEQSYSLKDGAEIVIATPGRLLDCL---ERRVLVLSQCCYVIMD 500
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL---QRKKRQTLVFSAT 404
EADRMI+ G + I++ LP++N + +E + V +S + + + RQT++++AT
Sbjct: 501 EADRMIDLGFEDPVNRILESLPVSNVKPD--TEDAENPVEMSKIIGGKERYRQTMMYTAT 558
Query: 405 I--ALSADFRKKLKHGSL 420
+ A+ RK L+ ++
Sbjct: 559 MPPAIERIARKYLRRPAI 576
>gi|326920998|ref|XP_003206751.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Meleagris
gallopavo]
Length = 804
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 107/202 (52%), Gaps = 21/202 (10%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L L++TPTRELA+QV H+ VAK ++ +VGGM+ +KQER+L +PE+V+ TPGR
Sbjct: 345 LLGLVLTPTRELAVQVKHHIDAVAKFTGIKTAILVGGMAAQKQERVLNRKPEIVIATPGR 404
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
LWEL+ HL L L V+DEADRM+E GHF EL ++++L N+ Q
Sbjct: 405 LWELIKEKHPHLSNLRQLRCLVIDEADRMVERGHFLELSQLLEVL------NDSQ----- 453
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
KRQT VFSAT+ L ++ K +E L E+ G++
Sbjct: 454 --------YNPKRQTFVFSATLTLVHQIPTRILQKKNAKKIDKK--TKLEMLMEKVGIKG 503
Query: 444 NVAIVDLTNVSVLANKLEESFI 465
++DLT L E+ I
Sbjct: 504 KPKVIDLTRKEATVETLMETRI 525
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAA 219
E L + + + AW +L + ++K++ LGF PTPIQ +P+A + +DI+GAA
Sbjct: 185 EVLSTSTDHKADVSAWKDLFVPQPVLKALSSLGFSAPTPIQALTLPSAI-RDNMDILGAA 243
Query: 220 ETGSGKTLAFGLPIMQRLLE 239
ETGSGKTLAF +P++ +LE
Sbjct: 244 ETGSGKTLAFAIPMIHCVLE 263
>gi|226510036|ref|NP_001147911.1| ATP-dependent RNA helicase DDX23 [Zea mays]
gi|195614524|gb|ACG29092.1| ATP-dependent RNA helicase DDX23 [Zea mays]
Length = 736
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 24/231 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W+E +L L+++I + G+++P+PIQ A IP Q D+IG AETGSGKT AF LP++
Sbjct: 317 WSESKLGTELLRAIDKAGYEKPSPIQMAAIPLGLQQR--DVIGIAETGSGKTAAFVLPML 374
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ L EE E P A+++ PTRELA Q+ + + A + ++V
Sbjct: 375 SYITR--------LPPISEENEAEGPY----AVVMAPTRELAQQIEEETVKFATYLGLKV 422
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VLDEADRMI+
Sbjct: 423 VSIVGGQSIEEQGFKIRQGCEIVIATPGRLLDCL---ERRYAVLNQCNYVVLDEADRMID 479
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++ ++D +P +N E + E+ +R R T +FSAT+
Sbjct: 480 MGFEPQVVGVLDAMPSSNLKPENEDEELDE-------KRIYRTTYMFSATM 523
>gi|257056836|ref|YP_003134668.1| DNA/RNA helicase, superfamily II [Saccharomonospora viridis DSM
43017]
gi|256586708|gb|ACU97841.1| DNA/RNA helicase, superfamily II [Saccharomonospora viridis DSM
43017]
Length = 570
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 124/231 (53%), Gaps = 38/231 (16%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L P L++++ LG++EPTPIQ+A IP D++G A TG+GKT AF LP++
Sbjct: 18 FSELGLRPELLQALAELGYEEPTPIQRAAIPPLLD--GCDVVGQAATGTGKTAAFALPVL 75
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
R+ + E+GE + A+++ PTRELA QV + ++ + + VRV
Sbjct: 76 HRIRDG---------ERGERGARAQRGAAPSAVVLVPTRELAAQVCEAMRRYGRRLGVRV 126
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S +Q R L+ ++VV TPGR + +S G ++L L VLDEAD M++
Sbjct: 127 LPVYGGQSMSRQLRALEEGVDVVVATPGRALDHLSRGS---LDLSALRMVVLDEADEMLD 183
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++ +I++ P RQT++FSAT+
Sbjct: 184 MGFAEDIDTILERTP------------------------DDRQTMLFSATM 210
>gi|291225666|ref|XP_002732826.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23-like
[Saccoglossus kowalevskii]
Length = 768
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 131/233 (56%), Gaps = 17/233 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E L ++ I +G+KEPTPIQ+ IP D+IG AETGSGKT AF +P+
Sbjct: 340 SWTEAGLPDYIIDVIDSMGYKEPTPIQRQAIPIGLQNR--DVIGVAETGSGKTAAFLIPL 397
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + K+ ++ + YA +I+ PTRELA Q+ K + +R
Sbjct: 398 LVWI----SSLPKIARQEDVDQGPYA-------VILAPTRELAQQIEAETINFGKPLGIR 446
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V I+GG+S E Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI
Sbjct: 447 TVSIIGGISREDQGFKLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYVVLDEADRMI 503
Query: 354 ENGHFRELQSIIDMLPMTNGS-NEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G ++Q I++ LP++N + +E + + + K RQT++F+AT+
Sbjct: 504 DMGFEPDVQHILEYLPVSNQKPDTDDAEDHDKLLANFASKHKYRQTVMFTATM 556
>gi|337745879|ref|YP_004640041.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus KNP414]
gi|379719836|ref|YP_005311967.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus 3016]
gi|386722433|ref|YP_006188759.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
gi|336297068|gb|AEI40171.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus KNP414]
gi|378568508|gb|AFC28818.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus 3016]
gi|384089558|gb|AFH60994.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
Length = 537
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 152/283 (53%), Gaps = 56/283 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++E L P ++++I +GF+E TPIQ+ IP A +G+ D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSEFGLEPKVLRAITEMGFEESTPIQEKAIPVAL-EGR-DLIGQAQTGTGKTAAFGIPLV 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++ + EK + ALI+ PTRELA+QV + ++++ + +R
Sbjct: 62 NKIDVKEEK--------------------IVALIMCPTRELAIQVAEEIEKLGRFKGIRS 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG KQ R L+ +P++++GTPGRL + ++ + ++L + +LDEAD M++
Sbjct: 102 LPIYGGQDIVKQIRGLRKKPQIIIGTPGRLLDHIN---RKTIKLDDVQTVILDEADEMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 409
G +++SI+ ++P ++R T++FSAT+ L+
Sbjct: 159 MGFMDDIKSILSLVP------------------------EERNTMLFSATMPVNIQKLAQ 194
Query: 410 DFRKKLKHGSLKLKQSVNGL--NSIETLSERAGMRANVAIVDL 450
F K +H S+ KQ L + L ER A ++D+
Sbjct: 195 QFLKDPEHVSVIPKQVSAPLIDQAYIELHERQKFEALCRLIDM 237
>gi|197100123|ref|NP_001125347.1| probable ATP-dependent RNA helicase DDX23 [Pongo abelii]
gi|67460452|sp|Q5RC67.1|DDX23_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=DEAD box protein 23
gi|55727779|emb|CAH90640.1| hypothetical protein [Pongo abelii]
Length = 820
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 139/241 (57%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV ++ VLD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLVP-SRCTYVVLD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|46124943|ref|XP_387025.1| hypothetical protein FG06849.1 [Gibberella zeae PH-1]
gi|91207408|sp|Q4I7F9.1|PRP28_GIBZE RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
Length = 721
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 128/239 (53%), Gaps = 18/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W E L L+ + +G+K+P+PIQ+A IP A D+IG A TGSGKT
Sbjct: 283 IPNPMRSWQESNLPQRLLNIVDDVGYKDPSPIQRAAIPIALQ--ARDLIGVAVTGSGKTA 340
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF LP++ + + L+E + YA LI+ PTREL Q+ ++ A
Sbjct: 341 AFLLPLLVYISDL-----PPLDEINKHDGPYA-------LIMAPTRELVQQIETEARKFA 388
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ RVV IVGG E+Q L+ E+VV TPGRL + + E+ L+ L + ++D
Sbjct: 389 GPLGFRVVSIVGGHQIEEQAYNLRDGAEIVVATPGRLLDCI---ERRLLVLSQCCYVIMD 445
Query: 348 EADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EADRMI+ G + I+D LP+TN + ++E Q + + RQT++++AT+
Sbjct: 446 EADRMIDLGFEESVNKILDALPVTNEKPDTDEAENAQIMQRYLGGRDRYRQTMMYTATM 504
>gi|399116968|emb|CCG19780.1| ATP-dependent rna helicase [Taylorella asinigenitalis 14/45]
Length = 562
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 129/241 (53%), Gaps = 40/241 (16%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L + +L+KS+ R+ F+ PT +Q IP A +GK D+I +A+TGSGKT AF LP +
Sbjct: 6 FADLGIEQILLKSLERIDFRNPTEVQVKSIPLAL-EGK-DLIVSAQTGSGKTAAFMLPSI 63
Query: 235 QRLLEERE---------KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
QRLL E E KA +KG+ PK ++ L++TPTRELA+QV D KE
Sbjct: 64 QRLLHELETRPQTEEISKAKSSRRKKGKPTAN-PPKYGVQILVLTPTRELAMQVADATKE 122
Query: 286 VAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
G V + +VGGM+ Q L E++V TPGRL + + G V+LH L
Sbjct: 123 FIYGFKGVHIATLVGGMAYGPQINSLSREVEIIVATPGRLLDHIKAGR---VKLHNLKVL 179
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
+LDEADRM++ G ++++++ P ++QTL+FSAT
Sbjct: 180 ILDEADRMLDMGFIHDIKNVVAETP------------------------DEKQTLLFSAT 215
Query: 405 I 405
Sbjct: 216 F 216
>gi|423298414|ref|ZP_17276472.1| hypothetical protein HMPREF1070_05137 [Bacteroides ovatus
CL03T12C18]
gi|392663326|gb|EIY56877.1| hypothetical protein HMPREF1070_05137 [Bacteroides ovatus
CL03T12C18]
Length = 374
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 126/231 (54%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL + ++K+I G+ PTPIQ IPAA K DI+G A+TG+GKT +F +PI+
Sbjct: 3 FKELNITEPILKAIEEKGYAVPTPIQGEAIPAAL--AKRDILGCAQTGTGKTASFAIPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L +E A + +G ++ALI+ PTRELALQ+++ + + AK VR
Sbjct: 61 QHLQMNKEAA----KCRG-----------IKALILMPTRELALQISECINDYAKYTQVRH 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG++ Q +L +++V TPGRL +LM+ G H L + +FVLDEADRM++
Sbjct: 106 GVIFGGVNQRPQVDMLHKGIDILVATPGRLLDLMNQGHIH---LDKIQYFVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+ LP K++QTL FSAT+
Sbjct: 163 MGFIHDIKRILPKLP------------------------KEKQTLFFSATM 189
>gi|169773397|ref|XP_001821167.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Aspergillus
oryzae RIB40]
gi|91207407|sp|Q2UH00.1|PRP28_ASPOR RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|83769028|dbj|BAE59165.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391866029|gb|EIT75307.1| U5 snRNP-like RNA helicase subunit [Aspergillus oryzae 3.042]
Length = 803
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 142/252 (56%), Gaps = 22/252 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W+E L LM+ + ++G+KEPTPIQ+A IP A D+IG A TGSGKT +F LP+
Sbjct: 368 SWDESGLPKRLMELVNKVGYKEPTPIQRAAIPIAMQSR--DLIGVAVTGSGKTASFLLPL 425
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + E + +E E G A+++ PTRELA Q+ K+ + +
Sbjct: 426 LVYIAEL---------PRIDEFEWRKNDGPY-AIVLAPTRELAQQIEIEAKKFTEPLGFN 475
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI
Sbjct: 476 VVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCI---ERRMLVLSQCCYVIMDEADRMI 532
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS---LQRKKRQTLVFSATIALSAD 410
+ G + I+D LP++N + SE+ + + +S + + RQT++++AT+ + +
Sbjct: 533 DLGFEEPVNKILDALPVSN--EKPDSEEAENSMAMSQHIGTKDRYRQTMMYTATMPTAVE 590
Query: 411 --FRKKLKHGSL 420
RK L+ ++
Sbjct: 591 RIARKYLRRPAI 602
>gi|218132094|ref|ZP_03460898.1| hypothetical protein BACEGG_03721 [Bacteroides eggerthii DSM 20697]
gi|217985744|gb|EEC52085.1| DEAD/DEAH box helicase [Bacteroides eggerthii DSM 20697]
Length = 392
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 129/236 (54%), Gaps = 46/236 (19%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
T F + +L + ++K+I G+ PTPIQ IPA GK DI+G A+TG+GKT AF
Sbjct: 18 TTFMTFKDLNITESILKAIEEKGYVNPTPIQAKAIPALL-VGK-DILGCAQTGTGKTAAF 75
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 289
+PI+Q+L +A K L ++ALI+TPTRELALQ+++ + + AK
Sbjct: 76 AIPIIQQL-----QADKSLNNS------------IKALILTPTRELALQISECIDDYAKY 118
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
VR I GG++ Q +L +++V TPGRL +LM+ G V L+ + FVLDEA
Sbjct: 119 TQVRHGVIFGGVNQRTQVNMLHKGVDILVATPGRLLDLMNQG---YVRLNNIQHFVLDEA 175
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
DRM++ G +++ ++ LP K++QTL+FSAT+
Sbjct: 176 DRMLDMGFIHDIKRLLPKLP------------------------KEKQTLLFSATM 207
>gi|145539279|ref|XP_001455334.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423133|emb|CAK87937.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 132/266 (49%), Gaps = 58/266 (21%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDI 215
D EE+ +S + EL + L + +LG+K PTPIQ+ +P K DI
Sbjct: 2 DQQEEQQISSV-------TFKELGVCEELSSACEKLGYKIPTPIQQQSLPYTLQ--KKDI 52
Query: 216 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 275
IG AETGSGKTLAFGLPI+Q LL P+ + ALI++PTREL
Sbjct: 53 IGLAETGSGKTLAFGLPILQHLLAN-------------------PQPY-YALILSPTREL 92
Query: 276 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 335
+Q+ +H + + I ++ V I+GGM Q + L +P +++GTPG++ + +
Sbjct: 93 CVQIQEHFQAIGASIALKSVVILGGMDPLAQAKALAQKPHIIIGTPGKILYHLENTKGF- 151
Query: 336 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 395
L L F VLDEAD+++ RE+ +I+D++P K+
Sbjct: 152 -NLKQLKFLVLDEADKLLNMDFEREINAILDIIP------------------------KE 186
Query: 396 RQTLVFSATIALSADFRKKLKHGSLK 421
R T +FSAT+ KL+ SLK
Sbjct: 187 RNTYLFSATMTNKVS---KLQRASLK 209
>gi|378725910|gb|EHY52369.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28 [Exophiala
dermatitidis NIH/UT8656]
Length = 835
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 139/258 (53%), Gaps = 21/258 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W E L L++ + ++G+K+P+PIQ+A IP A D+IG A TGSGKT
Sbjct: 385 IPNPMRSWQESGLPRRLLQIVEQVGYKDPSPIQRAAIPIALQNR--DLIGVAVTGSGKTA 442
Query: 228 AFGLPIMQRLLE-EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 286
AF LP++ + E R +M G A+I+ PTRELA Q+ K+
Sbjct: 443 AFLLPLLVYISELPRLDEDEMRRNNGP-----------YAIILAPTRELAQQIEIEAKKF 491
Query: 287 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
A + VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++
Sbjct: 492 ATPLGFTVVSIVGGHSIEEQAYNLRNGAEIIIATPGRLVDCI---ERRIIVLEQCCYVIM 548
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSAT 404
DEADRMI+ G + I+D LP++N + ++ + ++ + + RQT++++AT
Sbjct: 549 DEADRMIDMGFEEPVNKILDALPVSNEKPDSEAAEDSRAMSSHIGGRDIRYRQTMMYTAT 608
Query: 405 I--ALSADFRKKLKHGSL 420
+ A+ RK L+ ++
Sbjct: 609 MPPAVERIARKYLRRPAI 626
>gi|384246378|gb|EIE19868.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 508
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 145/316 (45%), Gaps = 66/316 (20%)
Query: 109 DGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKI-----------KTVEESVTVSNGPDD 157
DG ED G+ K K +++K+K+ G K+VE++
Sbjct: 4 DGLEDTTGITLFA----KQTKKRRRKEKETGDAAQKPPPETENDSKSVEQNTAALGAETA 59
Query: 158 AEEELVSEAEISTEFD-----AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
A +E E ++ + L + L + LG PT +Q+ CIPA G
Sbjct: 60 ANDEATERQEPASTSGQEAPVTFRSLGISEWLDRVCKSLGMVRPTQVQRGCIPAIL--GG 117
Query: 213 VDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 272
D++G A TGSGKT AF LPI+QRL E P G + AL++TPT
Sbjct: 118 RDVLGTAHTGSGKTAAFALPILQRLARE-------------------PYG-IFALVLTPT 157
Query: 273 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 332
RELA+Q+ D + + G+++ ++GG+ + Q + L RP ++V TPGRL +L+S
Sbjct: 158 RELAMQLADQFRALGSGMSLTDAVVIGGLDMQSQAKALAQRPHIIVATPGRLRDLLSAHA 217
Query: 333 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 392
+ ++F VLDEADR++E EL+ I LP
Sbjct: 218 DLAEGFNRVAFLVLDEADRLLEPTFESELRVIASHLP----------------------- 254
Query: 393 RKKRQTLVFSATIALS 408
+RQTL+FSAT+ S
Sbjct: 255 -AQRQTLLFSATLTRS 269
>gi|350424960|ref|XP_003493968.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Bombus
impatiens]
Length = 784
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 141/233 (60%), Gaps = 17/233 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E ++ I ++G+K+ TPIQ+ IP DIIG AETGSGKTLAF +P+
Sbjct: 357 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNR--DIIGVAETGSGKTLAFLIPL 414
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 415 LLWITS----LPKI--ERLEEADQ-GPY----SIILAPTRELAQQIEEETNKFGQPLGIR 463
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI
Sbjct: 464 TVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMI 520
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 521 DMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 573
>gi|328870452|gb|EGG18826.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 507
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 164/324 (50%), Gaps = 63/324 (19%)
Query: 117 VQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWN 176
V K++E N N K K +++ I + EE +G D E + E +T FD
Sbjct: 38 VIKKEESN--NNKKKVLEREALDDVISSDEED----DGIDKVENSKLDE---NTTFD--- 85
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQR 236
+L +HP ++++ R+GFK+PT IQ+ IP A G+ DIIG A+TGSGKT AF +PI+Q+
Sbjct: 86 QLGMHPQIIEACVRMGFKKPTEIQRESIPHAI-AGR-DIIGLAQTGSGKTAAFAIPILQQ 143
Query: 237 LLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 296
LL+ + L ALI++PTRELA Q++ + + I V+
Sbjct: 144 LLQSPQP--------------------LFALILSPTRELAFQISQQFEALGAVIGVKCGV 183
Query: 297 IVGGMSTEKQERLLKARPELVVGTPGR-LWELMSGGEKHLVELHTLSFFVLDEADRMIEN 355
+VGGM +Q +L +P ++VGTPGR ++ L + H L L F V+DEADR++
Sbjct: 184 LVGGMDVMQQAMVLARKPHIIVGTPGRVMYHLENTKGFH---LKALKFLVMDEADRLLSM 240
Query: 356 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-ALSADFRKK 414
E+ I+ ++P K R T +FSAT+ + A +K
Sbjct: 241 DFEEEINKILKVIP------------------------KNRNTYLFSATMTSKVAKLQKA 276
Query: 415 LKHGSLKLKQSVNGLNSIETLSER 438
+K++ + ++++TL ++
Sbjct: 277 SLVNPIKVQVASTKYSTVDTLVQQ 300
>gi|345515892|ref|ZP_08795389.1| ATP-dependent RNA helicase DeaD [Bacteroides dorei 5_1_36/D4]
gi|229436523|gb|EEO46600.1| ATP-dependent RNA helicase DeaD [Bacteroides dorei 5_1_36/D4]
Length = 434
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 125/231 (54%), Gaps = 47/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K++ + G+ PTPIQ+ IP +GK D++G A+TG+GKT AF +P++
Sbjct: 3 FKELDLIEPILKALQQTGYTTPTPIQEQAIPVLL-KGK-DLLGCAQTGTGKTAAFAIPLI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRL + K G ++ALI+TPTRELA+Q+ ++ + AK V+
Sbjct: 61 QRLYQSDHKKG------------------IKALILTPTRELAIQIGENFDQYAKYAGVKH 102
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ + Q LK ++++ TPGRL +L S G + L L +FVLDEADRM++
Sbjct: 103 AVIFGGVPQKAQVDALKRGVQVLIATPGRLLDLQSQG---CISLKGLEYFVLDEADRMLD 159
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ ++ ++P +RQTL FSAT+
Sbjct: 160 MGFIHDIKKVLKLIPA------------------------RRQTLFFSATM 186
>gi|389722095|ref|ZP_10188778.1| ATP-dependent RNA helicase [Rhodanobacter sp. 115]
gi|388443987|gb|EIM00117.1| ATP-dependent RNA helicase [Rhodanobacter sp. 115]
Length = 437
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 136/263 (51%), Gaps = 54/263 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIP--AAAHQGKVDIIGAAETGSGKTLAFGL 231
++ L L P L++++ G+ EPTPIQ A IP A H D++ AA+TG+GKT AF L
Sbjct: 2 SFESLGLVPTLLRALAEQGYAEPTPIQAAAIPEVLAGH----DLLAAAQTGTGKTAAFAL 57
Query: 232 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 291
P++QRL++ A P+ R LI+TPTRELA Q+ D+L+ AK ++
Sbjct: 58 PLLQRLID---------------APAATPR-RPRVLILTPTRELAAQIDDNLRAYAKYLH 101
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
VR I GG+ Q L+ ++V+ TPGRL + M ++ +EL + VLDEADR
Sbjct: 102 VRSAVIFGGVGMGPQINALRRGVDVVIATPGRLIDHM---QQRNIELSGVDVLVLDEADR 158
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----A 406
M++ G L+ I+ +P K+RQTL+FSAT A
Sbjct: 159 MLDMGFLPALKRILTAVP------------------------KQRQTLLFSATFAAPIKA 194
Query: 407 LSADFRKKLKHGSLKLKQSVNGL 429
L+ F ++ + S+ +V L
Sbjct: 195 LAMQFMRQPREVSVSPPNTVTQL 217
>gi|339998715|ref|YP_004729598.1| ATP-dependent RNA helicase rhlE [Salmonella bongori NCTC 12419]
gi|339512076|emb|CCC29797.1| putative ATP-dependent RNA helicase rhlE [Salmonella bongori NCTC
12419]
Length = 451
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 142/252 (56%), Gaps = 48/252 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L LHP ++++I G++EPTPIQ+ IPA +G+ D++ +A+TG+GKT F LP+
Sbjct: 2 SFDSLGLHPDILRAIAGQGYREPTPIQQQAIPAVL-EGR-DLMASAQTGTGKTAGFSLPL 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q L+ ++ A KG +RALI+TPTRELA Q+ +++++ ++ +N+R
Sbjct: 60 LQHLITQQPHA------KGRRP--------VRALILTPTRELAAQIGENIRDYSQYLNIR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ + GG+S Q L+ +++V TPGRL +L ++ V+L + VLDEADRM+
Sbjct: 106 SLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRML 162
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR- 412
+ G +++ ++ LP KRQ L+FSAT S D +
Sbjct: 163 DMGFIHDIRRVLAKLP------------------------PKRQNLLFSAT--FSDDIKA 196
Query: 413 --KKLKHGSLKL 422
+KL H L++
Sbjct: 197 LAEKLLHNPLEI 208
>gi|353234580|emb|CCA66604.1| related to ATP-dependent helicase involved in rRNA processing
[Piriformospora indica DSM 11827]
Length = 571
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 153/303 (50%), Gaps = 50/303 (16%)
Query: 86 PGKK--------TNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKK 137
PGK+ T K+ R D D EDG + + ++ ++ +++ K
Sbjct: 2 PGKRKADPDTGATTASKKARFDQWLSDMEDSSDSEDGRA--EPENRSDDSESITEEQINK 59
Query: 138 KGKKIKTVEE----SVTVSNGPDDAEEELVSEAEIST---EFDAWN--ELRLHPLLMKSI 188
++ VEE S + + P A + +V++ I + E DA N EL +HP L+ S+
Sbjct: 60 VARQFSPVEEENEKSARLGSRPSKAGKGVVTQRAIPSAEKEEDAVNFAELGVHPDLVTSL 119
Query: 189 YRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKML 248
+ + PTP+Q ACIPA QG +D IG A+TGSGKT+AF +PI+Q+L+++
Sbjct: 120 ANMSIRRPTPVQAACIPALL-QG-LDCIGNAKTGSGKTVAFAIPILQQLMKD-------- 169
Query: 249 EEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQER 308
P G + ALI+TPTRELA Q+ D + NVR +VGGM Q
Sbjct: 170 -----------PYG-IYALILTPTRELAFQIADQFAILGGPFNVRTAIVVGGMDMIAQAI 217
Query: 309 LLKARPELVVGTPGRLWELM--SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
L+ RP +VV TPGRL + + + G +L VLDEADR++ EL ++
Sbjct: 218 ELENRPHVVVATPGRLVDHLNSTSGTWNLSR-------VLDEADRLLTPTFATELAALFQ 270
Query: 367 MLP 369
+LP
Sbjct: 271 VLP 273
>gi|451823382|ref|YP_007459656.1| superfamily II DNA and RNA helicase [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451776182|gb|AGF47223.1| superfamily II DNA and RNA helicase [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 480
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 124/233 (53%), Gaps = 46/233 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ L ++P ++ +I GF+ PTP+Q A IP A + D++ +A+TGSGKT AF LPI
Sbjct: 2 SFENLGINPNIISAIKATGFESPTPVQNATIPKAI--LRQDLVVSAQTGSGKTAAFILPI 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-V 292
+ L + + + ++ LI+TPTRELA+Q+T + +
Sbjct: 60 LNHLSQMPKSSNTAIQ----------------VLILTPTRELAMQITKAASSYGSNFHWL 103
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
R+ IVGGM + Q + L R +++V TPGRL + M G +L +HTL VLDEADRM
Sbjct: 104 RMATIVGGMPYQSQIKALSKRIDILVATPGRLIDQMQSGRVNLKSVHTL---VLDEADRM 160
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
++ G ++Q+I+ LP K+RQT++FSAT+
Sbjct: 161 LDMGFIEDIQNIVSHLP------------------------KERQTMLFSATL 189
>gi|405360716|ref|ZP_11025657.1| ATP-dependent RNA helicase RhlE [Chondromyces apiculatus DSM 436]
gi|397090405|gb|EJJ21269.1| ATP-dependent RNA helicase RhlE [Myxococcus sp. (contaminant ex DSM
436)]
Length = 503
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 123/233 (52%), Gaps = 48/233 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL+L L++++ G+ PTPIQ+ IP A GK D++G A+TG+GKT AF LPI+
Sbjct: 3 FDELQLQETLLRAVKAEGYTTPTPIQQKAIPHAL-AGK-DVLGVAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGINV 292
QRL + K P G +R L++TPTRELA QV + K + +
Sbjct: 61 QRL-----------------SAKAPPGGARPVRCLVLTPTRELAGQVGESFATYGKNLPL 103
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
R I GG+ Q + L+ +++V TPGRL +LM E+ V L +L FVLDEADRM
Sbjct: 104 RHTVIFGGVGQNPQVQALQRGVDVLVATPGRLLDLM---EQGCVSLRSLEVFVLDEADRM 160
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
++ G +++ +I LP KRQTL FSAT+
Sbjct: 161 LDMGFIHDVRRVIKALP------------------------SKRQTLFFSATL 189
>gi|319902651|ref|YP_004162379.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
gi|319417682|gb|ADV44793.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
Length = 422
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 147/294 (50%), Gaps = 74/294 (25%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ L+L ++K++ G+ PTPIQ+ IP QGK D++G A+TG+GKT AF +PI+
Sbjct: 3 FENLKLIEPILKALQEEGYSTPTPIQEKSIPILL-QGK-DLLGCAQTGTGKTAAFSIPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q+L + + G ++ALI+TPTRELA+Q+ + + K ++
Sbjct: 61 QKLYKTDNRKG------------------IKALILTPTRELAIQIGESFEAYGKYTGLKH 102
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ + Q LK ++++ TPGRL +L++ G + L TL FFVLDEADRM++
Sbjct: 103 TVIFGGVGQKPQTDDLKRGTQILIATPGRLQDLVNQG---FINLKTLDFFVLDEADRMLD 159
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 414
G +++ I+ MLP +RQTL FSAT+
Sbjct: 160 MGFIHDIRRILKMLPT------------------------QRQTLFFSATMP-------- 187
Query: 415 LKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES--FIE 466
+ IETL+ M +N A V++T VS + + +S F+E
Sbjct: 188 ---------------SEIETLAN--SMLSNPAKVEVTPVSSTVDTISQSVYFVE 224
>gi|295675961|ref|YP_003604485.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1002]
gi|295435804|gb|ADG14974.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1002]
Length = 484
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 131/245 (53%), Gaps = 43/245 (17%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETG 222
+S+ ++ + +++ L P ++K+I G+ PTPIQ IP G+ D++GAA+TG
Sbjct: 1 MSDTAVTPSTETFDQFGLAPDILKAIKESGYTSPTPIQAKAIPVVL-AGR-DVMGAAQTG 58
Query: 223 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTD 281
+GKT +F LPI+QRLL + + +P H +RALI+TPTRELA QV
Sbjct: 59 TGKTASFSLPIIQRLLPQANTSA-------------SPARHPVRALILTPTRELADQVAA 105
Query: 282 HLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 341
+++ AK +R + GG+ Q L+ E+++ TPGRL + + ++ L +
Sbjct: 106 NVQAYAKHTALRSAVVFGGVDMNPQSDQLRRGVEILIATPGRLLDHV---QQKTANLGQV 162
Query: 342 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 401
VLDEADRM++ G +LQ I+++LP K+RQTL+F
Sbjct: 163 QMLVLDEADRMLDMGFLPDLQRILNLLP------------------------KERQTLLF 198
Query: 402 SATIA 406
SAT +
Sbjct: 199 SATFS 203
>gi|282599579|ref|ZP_05971084.2| ATP-dependent RNA helicase RhlE [Providencia rustigianii DSM 4541]
gi|282568585|gb|EFB74120.1| ATP-dependent RNA helicase RhlE [Providencia rustigianii DSM 4541]
Length = 457
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 128/233 (54%), Gaps = 43/233 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++++L L+ ++++I LG+ PTPIQ+ IPA D++ +A+TG+GKT F LPI
Sbjct: 10 SFSDLALNEEILRAINELGYDSPTPIQQQAIPAVLAGN--DLLASAQTGTGKTAGFTLPI 67
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q+L++ + +RALI+TPTRELA QV +++KE ++ +N+R
Sbjct: 68 LQKLVDAPRSGNN--------------RRPIRALILTPTRELAAQVAENVKEYSRHLNIR 113
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG+S Q L++ ++++ TPGRL +L ++ V+L + VLDEADRM+
Sbjct: 114 SFVVFGGVSINPQMMKLRSGVDVLIATPGRLLDLE---HQNAVDLSQVEILVLDEADRML 170
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G +++ +I LP KKRQ L+FSAT +
Sbjct: 171 DMGFIHDIRRVITKLP------------------------KKRQNLLFSATFS 199
>gi|423302506|ref|ZP_17280528.1| hypothetical protein HMPREF1057_03669 [Bacteroides finegoldii
CL09T03C10]
gi|408470382|gb|EKJ88916.1| hypothetical protein HMPREF1057_03669 [Bacteroides finegoldii
CL09T03C10]
Length = 374
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 129/231 (55%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L + L++K+I G+ PT IQ+ IPAA K DI+G A+TG+GKT +F +PI+
Sbjct: 3 FRDLNIIELILKAIEEKGYTVPTSIQEKAIPAAL--AKRDILGCAQTGTGKTASFAIPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L + +E +K + ++ALI+TPTRELALQ+++ + + +K +VR
Sbjct: 61 QHL------------QANKETDK---RQGIKALILTPTRELALQISECIDDYSKYTHVRH 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG++ Q +L +++V TPGRL +LM+ G HL + +FVLDEADRM++
Sbjct: 106 GVIFGGVNQRPQIDMLHKGIDILVATPGRLLDLMNQGYIHLTN---IEYFVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ I+ LP K++QTL FSAT+
Sbjct: 163 MGFIHDIKRILPKLP------------------------KEKQTLFFSATM 189
>gi|348590699|ref|YP_004875161.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
gi|347974603|gb|AEP37138.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
Length = 562
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 129/241 (53%), Gaps = 40/241 (16%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L + +L+KS+ R+ F+ PT +Q IP A +GK D+I +A+TGSGKT AF LP +
Sbjct: 6 FADLGIEQILLKSLERIDFRNPTEVQVKSIPLAL-EGK-DLIVSAQTGSGKTAAFMLPSI 63
Query: 235 QRLLEERE---------KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 285
QRLL E E KA ++G+ PK ++ L++TPTRELA+QV D KE
Sbjct: 64 QRLLHELETRPQTEEISKAKSSRRKRGKSTAN-PPKYGVQILVLTPTRELAMQVADATKE 122
Query: 286 VAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 344
G V + +VGGM+ Q L E++V TPGRL + + G V+LH L
Sbjct: 123 FIYGFKGVHIATLVGGMAYGPQINSLSREVEIIVATPGRLLDHIKAGR---VKLHNLKVL 179
Query: 345 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
+LDEADRM++ G ++++++ P ++QTL+FSAT
Sbjct: 180 ILDEADRMLDMGFIHDIKNVVAETP------------------------DEKQTLLFSAT 215
Query: 405 I 405
Sbjct: 216 F 216
>gi|410078383|ref|XP_003956773.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
gi|372463357|emb|CCF57638.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
Length = 739
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 123/232 (53%), Gaps = 46/232 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+N L L ++K + LGF +P+PIQ A IP A GK DI+ A TGSGKT AF +PI+
Sbjct: 216 FNTLNLSRPVLKGLSSLGFTKPSPIQSATIPIAL-LGK-DIVAGAVTGSGKTAAFMIPII 273
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+RLL K A R +I+TPTRELA+Q++D K++ +N
Sbjct: 274 ERLLY-----------------KPAKVASTRVVILTPTRELAIQISDVAKKIGHFVNGLT 316
Query: 295 VPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ VGG++ +QE++LK+RP++V+ TPGR + + V+ + VLDEADRM+
Sbjct: 317 FGLAVGGLNLRQQEQILKSRPDIVIATPGRFIDHVRNSASFSVD--RVEILVLDEADRML 374
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
E G EL I+ +LP +RQ L+FSAT+
Sbjct: 375 EEGFQDELSEIMTLLPT------------------------RRQNLLFSATM 402
>gi|319778596|ref|YP_004129509.1| ATP-dependent RNA helicase [Taylorella equigenitalis MCE9]
gi|317108620|gb|ADU91366.1| ATP-dependent RNA helicase [Taylorella equigenitalis MCE9]
Length = 581
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 126/239 (52%), Gaps = 37/239 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L + L+KS+ R+ F+ PT +Q IP A +GK D+I +A+TGSGKT AF LP +
Sbjct: 6 FADLGIEQTLLKSLERIDFRNPTEVQVKSIPLAL-KGK-DLIVSAQTGSGKTAAFMLPSI 63
Query: 235 QRLLEEREK-------AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
Q+LL E E A K +++ +E PK ++ L++TPTRELA+QV+D KE
Sbjct: 64 QQLLHELETRPAPEQIASKSSKQRKRRSEANPPKYGVQILVLTPTRELAMQVSDATKEFI 123
Query: 288 KGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 346
G V + +VGGM+ Q L E+VV TPGRL + + G V L L +L
Sbjct: 124 YGFKGVHIATLVGGMAYGPQINSLSREVEIVVATPGRLLDHIKAGR---VNLRNLKILIL 180
Query: 347 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
DEADRM++ G ++ +++ P RQTL+FSAT
Sbjct: 181 DEADRMLDMGFIHDINNVVAETP------------------------DDRQTLLFSATF 215
>gi|301607357|ref|XP_002933278.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Xenopus
(Silurana) tropicalis]
Length = 817
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 108/202 (53%), Gaps = 21/202 (10%)
Query: 264 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 323
L L++TPTRELA+QV H+ VAK +R +VGGM+ +KQ+RLL RPE+V+ TPGR
Sbjct: 362 LLGLVVTPTRELAVQVKHHIDAVAKFTGIRTAIVVGGMAPQKQQRLLDRRPEIVIATPGR 421
Query: 324 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 383
LWEL+ HL L L V+DEADRM+E GH+ EL + ++L + ++
Sbjct: 422 LWELIRERHPHLRNLRQLRCLVIDEADRMVEKGHYAELSQLFELLSEVHYNS-------- 473
Query: 384 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 443
KRQT VFSAT+ L +L K + + + +L E+ GM+
Sbjct: 474 -----------KRQTFVFSATLTLIHQAPTRLLQKKKYKKIDKD--SKLVSLMEKIGMKD 520
Query: 444 NVAIVDLTNVSVLANKLEESFI 465
++DLT L E+ I
Sbjct: 521 KPKVIDLTRKQATVETLTETRI 542
>gi|365985163|ref|XP_003669414.1| hypothetical protein NDAI_0C05120 [Naumovozyma dairenensis CBS 421]
gi|343768182|emb|CCD24171.1| hypothetical protein NDAI_0C05120 [Naumovozyma dairenensis CBS 421]
Length = 628
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 119/214 (55%), Gaps = 21/214 (9%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIY--RLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGS 223
+ I + W+EL+L P ++ I +L FK+PTPIQ+ IP Q D IG A TGS
Sbjct: 197 SSIKSPLRNWDELKLLPPILDDILINKLNFKDPTPIQRITIPNILLQNDRDFIGVASTGS 256
Query: 224 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 283
GKTLAF LPI+ +LLE +K + + G +LI+ PTRELA Q+
Sbjct: 257 GKTLAFILPILIKLLETGDKPINLKKIDGP-----------MSLILVPTRELAQQIQSEA 305
Query: 284 KEVAKGI----NVRVVPIVGGMSTEKQERLLKARP-ELVVGTPGRLWELMSGGEKHLVEL 338
++ + N IVGG S E+ R L + +L++ TPG+L E + E H++ +
Sbjct: 306 DKIISFLRPSYNFNTCSIVGGYSLEEISRNLNEKACDLLIATPGKLIECL---ENHILTI 362
Query: 339 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 372
+SF VLDEAD+MI+ G +L+SI++ + + N
Sbjct: 363 QKISFLVLDEADKMIDLGFEDQLKSILNQIKIEN 396
>gi|340724474|ref|XP_003400607.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Bombus
terrestris]
Length = 784
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 141/233 (60%), Gaps = 17/233 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E ++ I ++G+K+ TPIQ+ IP DIIG AETGSGKTLAF +P+
Sbjct: 357 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNR--DIIGVAETGSGKTLAFLIPL 414
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 415 LLWITS----LPKI--ERLEEADQ-GP----YSIILAPTRELAQQIEEETNKFGQPLGIR 463
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI
Sbjct: 464 TVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMI 520
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 521 DMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 573
>gi|367019066|ref|XP_003658818.1| hypothetical protein MYCTH_2295090 [Myceliophthora thermophila ATCC
42464]
gi|347006085|gb|AEO53573.1| hypothetical protein MYCTH_2295090 [Myceliophthora thermophila ATCC
42464]
Length = 707
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 126/239 (52%), Gaps = 18/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W E L L+ ++ +G+ EPTPIQ+A IP A D+IG A TGSGKT
Sbjct: 266 IPNPMRSWEESNLPRRLLDIVHSVGYDEPTPIQRAAIPIALQA--RDLIGVAVTGSGKTA 323
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF LP++ + E L E + YA LI+ PTREL Q+ ++ A
Sbjct: 324 AFLLPLLVYISEL-----PPLTEYNKNDGPYA-------LILAPTRELVQQIESEARKFA 371
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ VV IVGG S E+Q L+ E++V TPGRL + + E+ L+ + ++D
Sbjct: 372 DPLGFTVVSIVGGHSLEEQAFSLRNGAEIIVATPGRLVDCL---ERRLLVFSQCCYIIMD 428
Query: 348 EADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EADRMI+ G L I+D LP+ N + ++E +Q + + RQT++++AT+
Sbjct: 429 EADRMIDQGFEEPLTKILDALPVANEKPDTEEAENSQLMSRYLGGKDRYRQTMMYTATM 487
>gi|296114606|ref|ZP_06833259.1| DEAD/DEAH box helicase domain protein [Gluconacetobacter hansenii
ATCC 23769]
gi|295978962|gb|EFG85687.1| DEAD/DEAH box helicase domain protein [Gluconacetobacter hansenii
ATCC 23769]
Length = 593
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 129/243 (53%), Gaps = 44/243 (18%)
Query: 181 HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEE 240
HP L +++ G++ PTP+Q A + AA G+ D++ +A+TGSGKT+AFGL + LL
Sbjct: 7 HPALQRALDEQGYENPTPVQTAVLDVAA-DGR-DLLVSAQTGSGKTVAFGLAMADTLLGG 64
Query: 241 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGG 300
E+ G P G A+II PTRELA+QVT L + R+V +GG
Sbjct: 65 DERLG--------------PAGAPLAVIIAPTRELAMQVTRELTWLYAAAGARIVSCIGG 110
Query: 301 MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 360
M ++ R L+ +VVGTPGRL + +S G + +L + VLDEAD M++ G E
Sbjct: 111 MDARREARALQIGAHIVVGTPGRLCDHLSRGRLVMTDLRVV---VLDEADEMLDLGFRDE 167
Query: 361 LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS-ADFRKKLKHGS 419
L+ ++D +P K R+TL+FSATIA A K+ +H +
Sbjct: 168 LEQLLDAMP------------------------KTRRTLLFSATIAREIASLAKRYQHDA 203
Query: 420 LKL 422
L++
Sbjct: 204 LRI 206
>gi|408388319|gb|EKJ68005.1| hypothetical protein FPSE_11816 [Fusarium pseudograminearum CS3096]
Length = 721
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 128/239 (53%), Gaps = 18/239 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W E L L+ + +G+K+P+PIQ+A IP A D+IG A TGSGKT
Sbjct: 283 IPNPMRSWQESNLPQRLLNIVDDVGYKDPSPIQRAAIPIALQ--ARDLIGVAVTGSGKTA 340
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF LP++ + + L+E + YA LI+ PTREL Q+ ++ A
Sbjct: 341 AFLLPLLVYISDL-----PPLDEINKHDGPYA-------LIMAPTRELVQQIETEARKFA 388
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
+ RVV IVGG E+Q L+ E+VV TPGRL + + E+ L+ L + ++D
Sbjct: 389 GPLGFRVVSIVGGHQIEEQAYNLRDGAEIVVATPGRLLDCI---ERRLLVLSQCCYVIMD 445
Query: 348 EADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
EADRMI+ G + I+D LP+TN + ++E Q + + RQT++++AT+
Sbjct: 446 EADRMIDLGFEESVNKILDALPVTNEKPDTDEAENAQIMQRYLGGRDRYRQTMMYTATM 504
>gi|74317119|ref|YP_314859.1| DEAD/DEAH box helicase [Thiobacillus denitrificans ATCC 25259]
gi|74056614|gb|AAZ97054.1| DEAD/DEAH box helicase [Thiobacillus denitrificans ATCC 25259]
Length = 460
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 118/196 (60%), Gaps = 19/196 (9%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L P +++++ +G+ PTPIQ IP A G DI+GAA+TG+GKT AF LP++
Sbjct: 4 FAELGLAPDILRALDEMGYVSPTPIQAQVIPRALQGG--DILGAAQTGTGKTAAFALPLI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
QRLL + +P H +RALI+TPTRELA+QV + ++ K + +R
Sbjct: 62 QRLLPFANTST-------------SPAKHPIRALILTPTRELAIQVEEAIQAYTKHVPLR 108
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ + GG++ Q +LK E++V TPGRL + + L +++TL VLDEADRM+
Sbjct: 109 SLVVYGGVNINTQIPILKTGVEILVATPGRLLDHVQNKTLMLTQVNTL---VLDEADRML 165
Query: 354 ENGHFRELQSIIDMLP 369
+ G +L+ I+ +LP
Sbjct: 166 DMGFMPDLRRIVALLP 181
>gi|383854652|ref|XP_003702834.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Megachile
rotundata]
Length = 784
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 141/233 (60%), Gaps = 17/233 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E ++ I ++G+K+ TPIQ+ IP DIIG AETGSGKTLAF +P+
Sbjct: 357 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNR--DIIGVAETGSGKTLAFLIPL 414
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 415 LLWITS----LPKI--ERLEEADQ-GPY----SIILAPTRELAQQIEEETNKFGQPLGIR 463
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI
Sbjct: 464 TVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMI 520
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 521 DMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 573
>gi|237707985|ref|ZP_04538466.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 9_1_42FAA]
gi|229457971|gb|EEO63692.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 9_1_42FAA]
Length = 434
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 125/231 (54%), Gaps = 47/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K++ + G+ PTPIQ+ IP +GK D++G A+TG+GKT AF +P++
Sbjct: 3 FKELDLIEPILKALQQTGYTTPTPIQEQAIPVLL-KGK-DLLGCAQTGTGKTAAFAIPLI 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
QRL + K G ++ALI+TPTRELA+Q+ ++ + AK V+
Sbjct: 61 QRLYQSDYKKG------------------IKALILTPTRELAIQIGENFDQYAKYTGVKH 102
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ + Q LK ++++ TPGRL +L S G + L L +FVLDEADRM++
Sbjct: 103 AVIFGGVPQKAQVDALKRGVQVLIATPGRLLDLQSQG---CISLKGLEYFVLDEADRMLD 159
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ ++ ++P +RQTL FSAT+
Sbjct: 160 MGFIHDIKKVLKLIPA------------------------RRQTLFFSATM 186
>gi|403238270|ref|ZP_10916856.1| DEAD/DEAH box helicase domain-containing protein [Bacillus sp.
10403023]
Length = 496
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 128/232 (55%), Gaps = 49/232 (21%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
A+NEL + LMKSI ++GF+E TPIQ IP A +G D+IG A+TG+GKT AFG+P+
Sbjct: 3 AFNELGISQDLMKSISKMGFEEATPIQSQTIPLAL-EGH-DVIGQAQTGTGKTAAFGIPL 60
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
++ + + E +++ ++I PTRELA+QV++ L ++ VR
Sbjct: 61 IENVDVKDE--------------------NIQGIVIAPTRELAIQVSEELHKIGHFNRVR 100
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
++PI GG +Q R LK P ++VGTPGR+ + ++ + ++L + VLDEAD M+
Sbjct: 101 ILPIYGGQDISRQIRSLKKHPHIIVGTPGRVIDHIN---RKTLKLQNVKTVVLDEADEML 157
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++++I+ +P +RQTL+FSAT+
Sbjct: 158 NMGFIEDIEAILKGVP------------------------DERQTLLFSATM 185
>gi|150401787|ref|YP_001325553.1| DEAD/DEAH box helicase [Methanococcus aeolicus Nankai-3]
gi|150014490|gb|ABR56941.1| DEAD/DEAH box helicase domain protein [Methanococcus aeolicus
Nankai-3]
Length = 529
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 117/198 (59%), Gaps = 27/198 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++++ + GFK PTPIQK IP G D++G A+TG+GKT AFGLPI+
Sbjct: 6 FLELGLCENTVEALEKKGFKHPTPIQKKAIPMLL-DGDYDVVGQAQTGTGKTAAFGLPII 64
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
++L E +K ++A+I+TPTRELALQV+D L + N+++
Sbjct: 65 EKL---------------ENTDK-----EVQAIILTPTRELALQVSDELNSLRGSKNLKI 104
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GG ++Q R LK +VVGTPGR+ + + G + LHT+ +FVLDEAD M++
Sbjct: 105 VAMYGGQPIQEQIRQLKKGVNVVVGTPGRIMDHLKRGT---LRLHTIKYFVLDEADEMLD 161
Query: 355 NGHFRELQSIIDMLPMTN 372
G +++ D+L TN
Sbjct: 162 MGFIDDIE---DILRYTN 176
>gi|408399032|gb|EKJ78157.1| hypothetical protein FPSE_01618 [Fusarium pseudograminearum CS3096]
Length = 793
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 122/239 (51%), Gaps = 49/239 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ + L +M+ + +GF +PTPIQ IP A GK D++G AETGSGKT AF LPI
Sbjct: 258 SFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIAL-MGK-DVVGGAETGSGKTGAFILPI 315
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGIN 291
++RLL Y PK R +++ PTRELA+Q ++A +
Sbjct: 316 LERLL-------------------YRPKKIPTTRVVVLLPTRELAIQCHAVATKLAAFTD 356
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
++ VGG+S + QE LK RP++++ TPGR + M V+ T+ VLDEADR
Sbjct: 357 IKFTLAVGGLSLKAQELELKLRPDVIIATPGRFIDHMRNSASFSVD--TVEILVLDEADR 414
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
M+E+G EL I+ LP K RQT++FSAT+ S D
Sbjct: 415 MLEDGFAEELNEILTTLP------------------------KSRQTMLFSATMTSSVD 449
>gi|422932838|ref|ZP_16965763.1| ATP-dependent RNA helicase DeaD [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|339892024|gb|EGQ80925.1| ATP-dependent RNA helicase DeaD [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 296
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 116/191 (60%), Gaps = 25/191 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ EL L ++K + + G++ PTPIQ+ IPA K DIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDK-DIIGQAQTGTGKTAAFSLPII 68
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
E + +++A+++TPTRELALQV + + ++ ++V
Sbjct: 69 ---------------------ETFEHLDYIQAIVLTPTRELALQVAEEMNSLSTSKKMKV 107
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 108 IPVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLN 164
Query: 355 NGHFRELQSII 365
G +++ I+
Sbjct: 165 MGFVEDIEKIL 175
>gi|260584701|ref|ZP_05852447.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Granulicatella
elegans ATCC 700633]
gi|260157724|gb|EEW92794.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Granulicatella
elegans ATCC 700633]
Length = 509
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 131/253 (51%), Gaps = 56/253 (22%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NEL L L++SI ++GF+E TPIQ IP A GK D+IG A+TG+GKT +FGLP++
Sbjct: 3 FNELGLDSALLESIEKMGFEEATPIQSQTIPLAL-AGK-DVIGQAQTGTGKTASFGLPML 60
Query: 235 QRL-LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
Q++ L R+ G L+I PTRELA+Q + L + K +
Sbjct: 61 QKINLRNRKVQG---------------------LVIAPTRELAIQTQEELYRLGKDKKIH 99
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V + GG +Q R LK +P +VVGTPGRL + +S + + L + VLDEAD M+
Sbjct: 100 VQAVYGGADIGRQIRQLKDQPHIVVGTPGRLLDHIS---RKTLRLDNIETLVLDEADEML 156
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LS 408
G +++SII ++P + RQTL+FSAT+ +
Sbjct: 157 NMGFLEDIESIIKLVP------------------------ENRQTLLFSATMPDDIKRIG 192
Query: 409 ADFRKKLKHGSLK 421
F K+ +H +K
Sbjct: 193 VQFMKEPEHVRIK 205
>gi|146292298|ref|YP_001182722.1| DEAD/DEAH box helicase [Shewanella putrefaciens CN-32]
gi|386312973|ref|YP_006009138.1| DEAD/DEAH box helicase [Shewanella putrefaciens 200]
gi|145563988|gb|ABP74923.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens
CN-32]
gi|319425598|gb|ADV53672.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens 200]
Length = 433
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 44/232 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ P ++++I G+++ TPIQ+ IPA +G+ D++ +A+TG+GKT AF LPI+
Sbjct: 3 FESFSFSPEILRAISDCGYQQMTPIQQQAIPAI-RRGQ-DVLASAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q KM+E+ E K + R LI+TPTRELA QV D++ K +N V
Sbjct: 61 Q----------KMVEKPSETL-----KSNARVLILTPTRELAAQVADNVTAYCKYLNFSV 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG+ E Q + LK +++V TPGRL E ++ V L + F VLDEADRM++
Sbjct: 106 LTIYGGVKIETQAQKLKRGADVIVATPGRLLEHLTACN---VSLSNVDFLVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
G ++Q I+ + KKRQ L+FSAT +
Sbjct: 163 MGFSADIQKILQAV------------------------NKKRQNLLFSATFS 190
>gi|19114126|ref|NP_593214.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351656|sp|Q09903.1|DRS1_SCHPO RecName: Full=ATP-dependent RNA helicase drs1
gi|1065890|emb|CAA91889.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe]
Length = 754
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 123/245 (50%), Gaps = 49/245 (20%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
++T ++ + L ++K + LGF+ PT IQ IP A GK DI+GAA TGSGKT
Sbjct: 254 MTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLAL-LGK-DIVGAAVTGSGKTA 311
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKE 285
AF +PI++RLL Y PK R LI+ PTRELA+Q +
Sbjct: 312 AFIVPILERLL-------------------YRPKKVPTTRVLILCPTRELAMQCHSVATK 352
Query: 286 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 345
+A ++ V +GG+S + QE+ L+ RP++V+ TPGR + M + VE + V
Sbjct: 353 IASFTDIMVCLCIGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVE--NIEIMV 410
Query: 346 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+DEADRM+E+G EL II P K RQT++FSAT+
Sbjct: 411 MDEADRMLEDGFADELNEIIQACP------------------------KSRQTMLFSATM 446
Query: 406 ALSAD 410
D
Sbjct: 447 TDKVD 451
>gi|120599766|ref|YP_964340.1| DEAD/DEAH box helicase [Shewanella sp. W3-18-1]
gi|120559859|gb|ABM25786.1| DEAD/DEAH box helicase domain protein [Shewanella sp. W3-18-1]
Length = 433
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 44/232 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ P ++++I G+++ TPIQ+ IPA +G+ D++ +A+TG+GKT AF LPI+
Sbjct: 3 FESFSFSPEILRAISDCGYQQMTPIQQQAIPAI-RRGQ-DVLASAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q KM+E+ E K + R LI+TPTRELA QV D++ K +N V
Sbjct: 61 Q----------KMVEKPSETL-----KSNTRVLILTPTRELAAQVADNVTAYCKYLNFSV 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG+ E Q + LK +++V TPGRL E ++ V L + F VLDEADRM++
Sbjct: 106 LTIYGGVKIETQAQKLKRGADVIVATPGRLLEHLTACN---VSLSNVDFLVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
G ++Q I+ + KKRQ L+FSAT +
Sbjct: 163 MGFSADIQKILQAV------------------------NKKRQNLLFSATFS 190
>gi|324505355|gb|ADY42303.1| ATP-dependent RNA helicase DDX23 [Ascaris suum]
Length = 515
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 134/233 (57%), Gaps = 17/233 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
W E L ++ I ++G+KEPTPIQ+ IP DIIG AETGSGKT AF +P++
Sbjct: 87 WAEAGLPSEVLDVIIKIGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTAAFLIPLL 144
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+ K+ + +++ YA +I+ PTRELA Q+ + + + + +R
Sbjct: 145 VWI----TSLPKIQSNEDQDSGPYA-------IIMAPTRELAQQIEEETVKFGQLLGIRT 193
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V ++GG S E+Q L+ E+V+ TPGRL +++ E + L ++ +LDEADRM++
Sbjct: 194 VSVIGGASREEQGLKLRLGVEVVIATPGRLLDVL---ENRYLSLDQCTYVILDEADRMLD 250
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIA 406
G E+Q +++ +P+TN + + + + + + +KK RQT++F+AT++
Sbjct: 251 MGFEPEVQKVLEYIPVTNLKPDTEEAEKEESIMENFYSKKKYRQTVMFTATMS 303
>gi|255080620|ref|XP_002503883.1| predicted protein [Micromonas sp. RCC299]
gi|226519150|gb|ACO65141.1| predicted protein [Micromonas sp. RCC299]
Length = 754
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 132/237 (55%), Gaps = 17/237 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+W E + + ++I ++G+ +P+PIQ A IP K D+IG AETGSGKT AF +P+
Sbjct: 323 SWEESTMPEQVKRAIQKVGYAKPSPIQMASIPIGLL--KRDVIGIAETGSGKTCAFVVPM 380
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+ + E L +E P AL++ PTRELA Q+ + + A+ +N R
Sbjct: 381 LAYIQE--------LPPMTDEVAALGPY----ALVMAPTRELAQQIEEETVKFAQFMNYR 428
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
V +VGG S E+Q L+ E+V+GTPGR+ +++ E+ L ++ VLDEADRMI
Sbjct: 429 VASVVGGQSIEEQGFKLRRGCEIVIGTPGRIIDVL---ERRYTVLQQCNYIVLDEADRMI 485
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
+ G ++ S++D + + E ++E+ +SL K R T +FSAT+ S +
Sbjct: 486 DMGFEPQVISVMDSMSAESLKPEEEAEKIDEQGLEASLGTKYRMTYMFSATMPPSVE 542
>gi|167041390|gb|ABZ06143.1| putative DEAD/DEAH box helicase [uncultured marine microorganism
HF4000_005K23]
Length = 427
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 125/232 (53%), Gaps = 51/232 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L+ L SI R+ FK PTPIQ IP A GK DI+G A+TG+GKTL +G+ +
Sbjct: 4 FSELNLNESLKHSIARMYFKIPTPIQAQAIPPAL-LGK-DILGTAQTGTGKTLCYGIACI 61
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG-INVR 293
+LL +R ALII PTRELA+QV D L + + +N++
Sbjct: 62 NKLLNDRGS---------------------NALIICPTRELAVQVGDVLNGLIENTMNIK 100
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
++GG S +KQ R L+ RP L++GTPGRL + + ++ ++LH F VLDE DRM+
Sbjct: 101 SAVLIGGESMQKQLRQLQKRPRLIIGTPGRLNDHL---KRKSLKLHQSYFLVLDETDRML 157
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G +++ I+ +P KK QTL+FSAT+
Sbjct: 158 DMGFIPQVEQILKFVP------------------------KKHQTLLFSATL 185
>gi|339503881|ref|YP_004691301.1| ATP-dependent RNA helicase RhlE [Roseobacter litoralis Och 149]
gi|338757874|gb|AEI94338.1| putative ATP-dependent RNA helicase RhlE [Roseobacter litoralis Och
149]
Length = 433
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 130/236 (55%), Gaps = 47/236 (19%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAF 229
++F+ N L P L+ + R+G +PTPIQK IP A + G+ D++G A+TG+GKT AF
Sbjct: 2 SDFEMMN---LPPELVARLGRMGLNDPTPIQKQAIPHAMN-GR-DVMGLAQTGTGKTAAF 56
Query: 230 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 289
G+P++ +MLE G A K +R L++ PTRELA Q++ +L+ A+
Sbjct: 57 GVPLV----------AQMLELDGRPAPK-----SVRGLVLAPTRELATQISVNLRSFAEN 101
Query: 290 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 349
V+V +VGG S Q + L+ +L+V TPGRL +LM ++ V L F VLDEA
Sbjct: 102 TKVKVAMVVGGQSINNQIKRLERGVDLLVATPGRLLDLM---DRRAVRLDETVFLVLDEA 158
Query: 350 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
D+M++ G +L+ I ++P K+RQT++FSAT+
Sbjct: 159 DQMLDMGFIHDLRKIASVIP------------------------KERQTMLFSATM 190
>gi|387792078|ref|YP_006257143.1| DNA/RNA helicase [Solitalea canadensis DSM 3403]
gi|379654911|gb|AFD07967.1| DNA/RNA helicase, superfamily II [Solitalea canadensis DSM 3403]
Length = 440
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NEL L ++K++ G+ +PTPIQ+ IP A +G+ D++G A+TG+GKT AF +PI+
Sbjct: 3 FNELNLIDPILKALQSEGYTQPTPIQEQSIPVAL-KGQ-DLLGCAQTGTGKTAAFTIPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q +L + P +RALI+TPTRELA+Q+ + + K + ++
Sbjct: 61 Q-----------LLHPIVRHEQGTTP---IRALILTPTRELAIQIGESIAAYGKNLKLKH 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG++ Q L +++V TPGRL +LM+ + + LH + FFVLDEADRM++
Sbjct: 107 LVIFGGVNQLNQTVALSKGVDILVATPGRLLDLMN---QKFIHLHKVQFFVLDEADRMLD 163
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ +I LP +KRQTL FSAT+
Sbjct: 164 MGFVNDVKRVIAKLP------------------------EKRQTLFFSATM 190
>gi|157960747|ref|YP_001500781.1| DEAD/DEAH box helicase [Shewanella pealeana ATCC 700345]
gi|157845747|gb|ABV86246.1| DEAD/DEAH box helicase domain protein [Shewanella pealeana ATCC
700345]
Length = 432
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 125/232 (53%), Gaps = 44/232 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ P ++++I G+++ TPIQ+ IPA +G+ D++ +A+TG+GKT AF LPI+
Sbjct: 3 FESFSFAPEILRAISECGYEKMTPIQQQAIPAV-RRGQ-DVLASAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q++L+ G+ + RALI+TPTRELA Q+ D++ + AK ++++V
Sbjct: 61 QKMLDNPSTTGR---------------SNARALILTPTRELAAQIADNINDYAKYLDLKV 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V + GG+ + Q LK ++++ TPGRL E + + L + F VLDEADRM++
Sbjct: 106 VTVYGGVKMDSQATKLKRGADIIIATPGRLLEHIIACN---LSLSNVDFLVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
G ++Q I+ + KKRQ L+FSAT +
Sbjct: 163 MGFSADIQKILQAV------------------------NKKRQNLLFSATFS 190
>gi|160880140|ref|YP_001559108.1| DEAD/DEAH box helicase [Clostridium phytofermentans ISDg]
gi|160428806|gb|ABX42369.1| DEAD/DEAH box helicase domain protein [Clostridium phytofermentans
ISDg]
Length = 514
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 125/231 (54%), Gaps = 48/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+NE+ L L+++I GF EP+PIQK IP +G+ DI+G A+TG+GKT AF LPI+
Sbjct: 3 FNEMNLIKPLLQAIKEEGFIEPSPIQKKTIPLVL-EGR-DILGCAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L KGE + +RALIITPTRELA+Q+ + + K +++
Sbjct: 61 QSL------------SKGEGS-------GVRALIITPTRELAIQIYESFECFGKYTSLKQ 101
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+ Q LKA ++++ TPGRL +L+ G + L + FVLDEAD+M++
Sbjct: 102 SVIYGGVGQSLQVNSLKAGIDILIATPGRLNDLIGQG---YITLDAIEMFVLDEADQMLD 158
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ +I +LP K RQTL+FSAT+
Sbjct: 159 MGFLNDIKKVIKLLP------------------------KTRQTLLFSATM 185
>gi|442755009|gb|JAA69664.1| Putative atp-dependent rna helicase [Ixodes ricinus]
Length = 291
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 109/186 (58%), Gaps = 25/186 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L+L ++ + LG K+P+P+Q+ CIP+ +GK D IG A+TGSGKTLAF LPI+
Sbjct: 16 FEDLQLKKWIIDQLNSLGIKKPSPVQQNCIPSIL-KGK-DCIGCAKTGSGKTLAFALPIL 73
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q+L E+ P G + AL++TPTRELA Q+++ K + K + ++
Sbjct: 74 QKLFED-------------------PYG-IFALVLTPTRELAFQISEQFKVIGKAVGLKD 113
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
IVGGM Q RLL P +VV TPGRL + + L + F VLDEADR++E
Sbjct: 114 CVIVGGMDMVTQGRLLAESPHVVVSTPGRLADHLESCNT--FTLGRIKFLVLDEADRLLE 171
Query: 355 NGHFRE 360
GHF E
Sbjct: 172 -GHFNE 176
>gi|392967075|ref|ZP_10332493.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
gi|387843872|emb|CCH54541.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
Length = 421
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 125/231 (54%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L ++ ++ G+ PTPIQ+ IP + D++G A+TG+GKT AF +PI+
Sbjct: 3 FSELPLISPILTALSEEGYTNPTPIQEQAIPPLL--SRRDLLGCAQTGTGKTAAFAIPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L E+R+ ++ P+ +RALI+TPTRELA+Q+ + + +NVR
Sbjct: 61 QLLHEDRK-------------QQQGPR-RIRALILTPTRELAIQIGESFAAYGRHLNVRH 106
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG+S Q LK+ ++++ TPGRL +LM+ G + L + FVLDEADRM++
Sbjct: 107 TVIFGGVSQHAQVNALKSGIDVLIATPGRLLDLMNQG---FISLRNIDLFVLDEADRMLD 163
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ +I LP +RQ+L FSAT+
Sbjct: 164 MGFIHDVKKVIVKLP------------------------TQRQSLFFSATM 190
>gi|46124501|ref|XP_386804.1| hypothetical protein FG06628.1 [Gibberella zeae PH-1]
gi|91206590|sp|Q4I830.1|DRS1_GIBZE RecName: Full=ATP-dependent RNA helicase DRS1
Length = 796
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 122/239 (51%), Gaps = 49/239 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ + L +M+ + +GF +PTPIQ IP A GK D++G AETGSGKT AF LPI
Sbjct: 257 SFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIAL-MGK-DVVGGAETGSGKTGAFILPI 314
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGIN 291
++RLL Y PK R +++ PTRELA+Q ++A +
Sbjct: 315 LERLL-------------------YRPKKIPTTRVVVLLPTRELAIQCHAVATKLAAFTD 355
Query: 292 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 351
++ VGG+S + QE LK RP++++ TPGR + M V+ T+ VLDEADR
Sbjct: 356 IKFTLAVGGLSLKAQELELKLRPDVIIATPGRFIDHMRNSASFSVD--TVEILVLDEADR 413
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
M+E+G EL I+ LP K RQT++FSAT+ S D
Sbjct: 414 MLEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSSVD 448
>gi|156083603|ref|XP_001609285.1| DEAD/DEAH box helicase [Babesia bovis T2Bo]
gi|154796536|gb|EDO05717.1| DEAD/DEAH box helicase, putative [Babesia bovis]
Length = 618
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 123/237 (51%), Gaps = 31/237 (13%)
Query: 131 KKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPL-LMKSIY 189
KK++K KK + T +ES ++ DD E + + FD W P+ + +++Y
Sbjct: 54 KKQRKSKKASE-GTAQESPSLPEVSDDQVNE-ATRGWNNILFDQWA----IPIGIRRNLY 107
Query: 190 RLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLE 249
PT IQ+ + G + I+ AETGSGKTLAF LPI L EK
Sbjct: 108 GANMTSPTVIQRLVFKPSLTAG-MHIVACAETGSGKTLAFSLPIALSLKCSDEKP----- 161
Query: 250 EKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERL 309
+ AL I PTRELALQV D + + KG V I+GGMS +KQER+
Sbjct: 162 --------------VSALAILPTRELALQVKDTMSMLIKGTQHSVFAIIGGMSIQKQERV 207
Query: 310 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 366
LK +PE++V TPGRLW++M L + VLDEADR++ F+EL +I+D
Sbjct: 208 LKHQPEVIVATPGRLWDIMQDVSITF----KLQYLVLDEADRLVSEQSFKELGNIVD 260
>gi|354557785|ref|ZP_08977043.1| DEAD/DEAH box helicase domain protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353550579|gb|EHC20016.1| DEAD/DEAH box helicase domain protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 530
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 136/245 (55%), Gaps = 52/245 (21%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ E+ L +++S+ +GF+EP+PIQK IP A VD+IG A+TG+GKT AFG+PI
Sbjct: 7 SFGEIALSKQVLQSLSEMGFEEPSPIQKEAIPLALE--GVDLIGQAQTGTGKTAAFGIPI 64
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINV 292
+ EK PK ++A+I++PTRELA+QV++ L ++ K +V
Sbjct: 65 I---------------------EKVNPKFQAVQAIILSPTRELAVQVSEELAKIGKYRHV 103
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
+++PI GG S ++Q R L+ ++VVGTPGR+ + + G ++L + VLDEAD M
Sbjct: 104 KILPIYGGQSIDRQIRALRFGSQVVVGTPGRILDHLKRGT---LKLQYVKMVVLDEADEM 160
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 412
++ G +++ I+ +P + RQ ++FSAT+ L+ R
Sbjct: 161 LDMGFVEDIEHILKEVPPED-----------------------RQVMLFSATMPLA--IR 195
Query: 413 KKLKH 417
K +H
Sbjct: 196 KLAQH 200
>gi|367045536|ref|XP_003653148.1| hypothetical protein THITE_2115255 [Thielavia terrestris NRRL 8126]
gi|347000410|gb|AEO66812.1| hypothetical protein THITE_2115255 [Thielavia terrestris NRRL 8126]
Length = 938
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 123/237 (51%), Gaps = 53/237 (22%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L+ L+++I R GF PTPIQ+ IP + D++G A TGSGKT AF +P++
Sbjct: 102 FQAMGLNANLLRAITRKGFSVPTPIQRKTIPLILE--RRDVVGMARTGSGKTAAFVIPMI 159
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+RL + G RALI++P+RELALQ +KE+ KG ++R
Sbjct: 160 ERLKAHSARVGA------------------RALILSPSRELALQTLKVVKELGKGTDLRT 201
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWEL---MSGGEKHLVELHTLSFFVLDEADR 351
V +VGG S E+Q L+ A P++V+ TPGR L MS ++L ++ + V DEADR
Sbjct: 202 VLLVGGDSLEEQFGLMAANPDIVIATPGRFLHLKVEMS------LDLSSIKYVVFDEADR 255
Query: 352 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 408
+ E G +L I+ LP + RQTL+FSAT+ S
Sbjct: 256 LFEMGFATQLTEILHALPPS------------------------RQTLLFSATLPSS 288
>gi|339009468|ref|ZP_08642040.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
gi|421872706|ref|ZP_16304323.1| DEAD-box ATP-dependent RNA helicase CshA domain protein
[Brevibacillus laterosporus GI-9]
gi|338773946|gb|EGP33477.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
gi|372458121|emb|CCF13872.1| DEAD-box ATP-dependent RNA helicase CshA domain protein
[Brevibacillus laterosporus GI-9]
Length = 529
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 132/253 (52%), Gaps = 54/253 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+++L LH ++++I+ +GF+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P+
Sbjct: 4 FSDLALHKNVLQAIHDMGFEEPSPIQAACIPKILEGG--DLIGQAQTGTGKTAAFGIPL- 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVR 293
AE P + ++A+++TPTRELA+QV L + K +R
Sbjct: 61 --------------------AEVLNPTNNRIQAIVLTPTRELAIQVAGELVRICKYKKIR 100
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+PI GG S Q R L+ +V+GTPGR+ + + H L + VLDEAD M+
Sbjct: 101 TLPIYGGQSISHQIRALRQGVHVVIGTPGRVLDHLRRKTLH---LENVKMLVLDEADEML 157
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 413
+ G ++++I+ S + +RQTL+FSAT+ K
Sbjct: 158 DMGFIEDIETIL------------------------SHMKAERQTLLFSATMPPEI---K 190
Query: 414 KLKHGSLKLKQSV 426
+L H +K ++V
Sbjct: 191 RLAHRYMKNPETV 203
>gi|288818118|ref|YP_003432466.1| ATP-dependent RNA helicase [Hydrogenobacter thermophilus TK-6]
gi|384128882|ref|YP_005511495.1| DEAD/DEAH box helicase [Hydrogenobacter thermophilus TK-6]
gi|288787518|dbj|BAI69265.1| ATP-dependent RNA helicase [Hydrogenobacter thermophilus TK-6]
gi|308751719|gb|ADO45202.1| DEAD/DEAH box helicase domain protein [Hydrogenobacter thermophilus
TK-6]
Length = 365
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 122/232 (52%), Gaps = 51/232 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+N +L +L K+I LG++EPTPIQK IP A DI+G A TG+GKT AFG+PI+
Sbjct: 3 FNFQQLSEILQKAIRDLGYEEPTPIQKEAIPLALK--GYDIMGQAATGTGKTAAFGIPIV 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
EK + L+AL++TPTRELALQV + L ++K ++V
Sbjct: 61 ---------------------EKISKDDGLKALVLTPTRELALQVKEQLYALSKYKALKV 99
Query: 295 VPIVGGMSTEKQERLL-KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
GG + LL K P +V+GTPGR+ +L+S G ++ L +SF VLDEAD M+
Sbjct: 100 FVFYGGTPVRRDLELLSKVVPNIVIGTPGRIKDLLSRG---VLNLGGVSFLVLDEADLML 156
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
+ G +++SII P K RQT +FSATI
Sbjct: 157 DMGFVEDIESIIAYTP------------------------KDRQTFLFSATI 184
>gi|319408783|emb|CBI82440.1| ATP-dependent RNA helicase [Bartonella schoenbuchensis R1]
Length = 454
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 129/233 (55%), Gaps = 44/233 (18%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
+A+ +L + LL ++++ G +P PIQK IP K DI+G A+TGSGKTLAFGLP
Sbjct: 6 NAFIKLGIPTLLTENLFIAGINKPKPIQKQAIPVMLK--KRDILGIAQTGSGKTLAFGLP 63
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
++ ++L +K PK RALI+ PTRELA+Q+ + ++ VAKG ++
Sbjct: 64 VLSQILAL--------------GDKRYPKTA-RALILVPTRELAVQIEESIRMVAKGSHL 108
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
I+GG+S Q + +K ++++ TPGRL +L+S + ++L F VLDEADRM
Sbjct: 109 STCLILGGVSRFAQIKRMKTGVDVLIATPGRLMDLVS---EKCIDLSQSRFLVLDEADRM 165
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
++ G R++Q I +L +KRQT +FSAT+
Sbjct: 166 LDMGFIRDVQRIAKLL------------------------HEKRQTALFSATM 194
>gi|223590189|sp|A5DLR3.2|DBP10_PICGU RecName: Full=ATP-dependent RNA helicase DBP10
gi|190347777|gb|EDK40116.2| hypothetical protein PGUG_04214 [Meyerozyma guilliermondii ATCC
6260]
Length = 914
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 124/235 (52%), Gaps = 48/235 (20%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIMQRLLE 239
L L+K+I + GFK+PTPIQ+ IP D++G A TGSGKT AF LP++++L
Sbjct: 106 LSKFLLKNIAKKGFKQPTPIQRKTIPLVMESR--DVVGMARTGSGKTAAFVLPVVEKL-- 161
Query: 240 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 299
+ ++PK +RA+I++P+RELALQ +KE KG ++R + ++G
Sbjct: 162 ----------------KSHSPKVGVRAVILSPSRELALQTFKQVKEFTKGTDLRSIVLIG 205
Query: 300 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 359
G S E Q + P+++V TPGR L E +L +L T+ + V DEADR+ E G
Sbjct: 206 GDSLEDQFSSMMTNPDILVATPGRFLHLKV--EMNL-DLKTVEYIVFDEADRLFEMGFAE 262
Query: 360 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS-ADFRK 413
+L ++ LP + RQ+L+FSAT+ S DF K
Sbjct: 263 QLNELLVALPPS------------------------RQSLLFSATLPRSLVDFAK 293
>gi|427710423|ref|YP_007052800.1| DEAD/DEAH box helicase [Nostoc sp. PCC 7107]
gi|427362928|gb|AFY45650.1| DEAD/DEAH box helicase domain protein [Nostoc sp. PCC 7107]
Length = 476
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 132/233 (56%), Gaps = 40/233 (17%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L L +++++ LG+ +PTPIQ IPA G+ D++ A+TG+GKT +F LP+
Sbjct: 42 SFSHLGLSNEIIRAVTELGYTKPTPIQMQAIPAVL-SGR-DLLAGAQTGTGKTASFTLPL 99
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q+L E+ K E + +RALI+TPTRELA QV +++E +K + +
Sbjct: 100 LQKLSSEKSL-------KSTSYECFP----IRALILTPTRELAAQVELNVREYSKYLKLN 148
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ + GG+S Q++LL+ R +++V TPGRL + + ++ V L + F VLDEADRM+
Sbjct: 149 TMAMFGGVSINPQKKLLRGRVDILVATPGRLLDHV---QQRTVNLSNVEFLVLDEADRML 205
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G R+++ I+ +LP K+RQ L+F AT +
Sbjct: 206 DMGFIRDIRRILSLLP------------------------KQRQNLLFFATFS 234
>gi|70996226|ref|XP_752868.1| ATP-dependent RNA helicase (Drs1) [Aspergillus fumigatus Af293]
gi|74672247|sp|Q4WRV2.1|DRS1_ASPFU RecName: Full=ATP-dependent RNA helicase drs1
gi|66850503|gb|EAL90830.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
Af293]
gi|159131623|gb|EDP56736.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
A1163]
Length = 830
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 123/243 (50%), Gaps = 45/243 (18%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
+ST ++ + L +++ + + F PTPIQ+ IP A GK DI+G+A TGSGKT
Sbjct: 305 VSTFNRSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVAL-LGK-DIVGSAVTGSGKTA 362
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +PI++RLL K P R I+ PTRELA+Q + ++A
Sbjct: 363 AFVVPILERLLFRPRKV---------------PTS--RVAILMPTRELAVQCYNVATKLA 405
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
++ +VGG S +QE +LK RP++++ TPGR + M V+ TL VLD
Sbjct: 406 THTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVD--TLEILVLD 463
Query: 348 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 407
EADRM+E+G EL I+ +P K RQT++FSAT+
Sbjct: 464 EADRMLEDGFADELNEILTTIP------------------------KSRQTMLFSATMTD 499
Query: 408 SAD 410
S D
Sbjct: 500 SVD 502
>gi|355564184|gb|EHH20684.1| Putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
Length = 820
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 138/241 (57%), Gaps = 20/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTL 227
I +W + L P +++ I + G+KEPTPIQ+ IP DIIG AETGSGKT
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR--DIIGVAETGSGKTA 443
Query: 228 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 287
AF +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + +
Sbjct: 444 AFLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFG 492
Query: 288 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 347
K + +R V ++GG+S E Q L+ E+V+ TPGRL +++ E + L ++ +LD
Sbjct: 493 KPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVL---ENCSLVLSRCTYVILD 549
Query: 348 EADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 404
EADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT
Sbjct: 550 EADRMIDMGFEPDVQKILEHMPVSNQKPDTDEADNPE-KMLANFESGKHKYRQTVMFTAT 608
Query: 405 I 405
+
Sbjct: 609 M 609
>gi|206579391|ref|YP_002239559.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae 342]
gi|290510541|ref|ZP_06549911.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. 1_1_55]
gi|206568449|gb|ACI10225.1| putative ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae
342]
gi|289777257|gb|EFD85255.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. 1_1_55]
Length = 451
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 133/233 (57%), Gaps = 43/233 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L L+P +++++ G+ EPTPIQ+ IPA QG+ D++ +A+TG+GKT F LP+
Sbjct: 2 SFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVM-QGR-DLMASAQTGTGKTAGFTLPL 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+QRL+++ A KG +RALI+TPTRELA QV +++++ +K +N+R
Sbjct: 60 LQRLIDKEPHA------KGRRP--------VRALILTPTRELAAQVGENVRDYSKYLNIR 105
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ + GG+S Q L+ +++V TPGRL +L ++ V L ++ VLDEADRM+
Sbjct: 106 SLVVFGGVSINPQMMKLRGGVDILVATPGRLLDLE---HQNAVSLDSVEILVLDEADRML 162
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
+ G +++ ++ LP +RQ L+FSAT +
Sbjct: 163 DMGFIHDIRRVLAKLP------------------------ARRQNLLFSATFS 191
>gi|329956784|ref|ZP_08297353.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
gi|328523823|gb|EGF50910.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
Length = 372
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 128/231 (55%), Gaps = 46/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L + ++K+I G+ PTPIQ IPAA GK DI+G A+TG+GKT AF +PI+
Sbjct: 3 FKDLNITEPILKAIEEKGYTSPTPIQVKAIPAAL-TGK-DILGCAQTGTGKTAAFAIPII 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L + G+E +K ++ALI+TPTRELALQ+++ + + AK VR
Sbjct: 61 QHL------------QAGKERDK-----SIKALILTPTRELALQISECIDDYAKYTQVRH 103
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
I GG++ Q +L +++V TPGRL +LM+ G + L ++ FVLDEADRM++
Sbjct: 104 GVIFGGVNQRAQVNMLHKGVDILVATPGRLLDLMNQG---YIRLDSVRHFVLDEADRMLD 160
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +++ ++ LP K++QTL FSAT+
Sbjct: 161 MGFIHDIKRLLPKLP------------------------KEKQTLFFSATM 187
>gi|86134655|ref|ZP_01053237.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
gi|85821518|gb|EAQ42665.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
Length = 438
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 129/248 (52%), Gaps = 48/248 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ L L +K++ G+ +P+PIQ+ IP +GK D++ +A+TG+GKT F LP+
Sbjct: 2 SFKSLGLSDAFVKAVEEKGYTKPSPIQEKAIPHIL-EGK-DVLASAQTGTGKTAGFTLPV 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+Q L E + KY P +RAL++TPTRELA QV D+++E +K +N++
Sbjct: 60 LQYLSETKH-------------PKYRP---IRALVLTPTRELAAQVHDNVREYSKYVNIK 103
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG+ Q LK +++V TPGRL +L ++ V + F+LDEADRM+
Sbjct: 104 SAVVFGGVKAASQIATLKRGVDILVATPGRLLDLH---DQKAVSFKRIDVFILDEADRML 160
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 413
+ G R++ II +P KRQ L+FSAT + K
Sbjct: 161 DMGFVRDINKIISYMPA------------------------KRQNLMFSATFSKEI---K 193
Query: 414 KLKHGSLK 421
KL G LK
Sbjct: 194 KLASGILK 201
>gi|358366421|dbj|GAA83042.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 934
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 119/231 (51%), Gaps = 47/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ + L+ L+K+I R GF PTPIQ+ IP D++G A TGSGKT AF +P++
Sbjct: 95 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMEDQ--DVVGMARTGSGKTAAFVIPMI 152
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q+L + G R LI++P+RELALQ +KE+ KG +++
Sbjct: 153 QKLKSHSTQVGA------------------RGLILSPSRELALQTLKVVKELGKGTDLKS 194
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
V +VGG S E+Q ++ P++V+ TPGR L E HL +L ++ + V DEADR+ E
Sbjct: 195 VLLVGGDSLEEQFSMMAGNPDIVIATPGRFLHLKV--EMHL-DLSSIRYVVFDEADRLFE 251
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G +L I+ LP T RQTL+FSAT+
Sbjct: 252 MGFAAQLTEILHGLPST------------------------RQTLLFSATL 278
>gi|356555223|ref|XP_003545934.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine
max]
Length = 591
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 137/286 (47%), Gaps = 48/286 (16%)
Query: 156 DDAEEELVSEAEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKV 213
+D +E + A+ T+ DA + +L L +K+ LG + P +Q+ CIP +G+
Sbjct: 50 EDHPDETATVADTDTDADAETFGDLGLAEWAVKTCRELGMRRPRGVQRRCIPRVL-EGR- 107
Query: 214 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 273
++G ETGSGKT AF LPI+ RL E P G + AL++TPTR
Sbjct: 108 HVLGVDETGSGKTAAFALPILHRLAEH-------------------PFG-VFALVVTPTR 147
Query: 274 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 333
ELA Q+ + + + +++R+ +VGGM +Q + L ARP LV+ TPGR+ L+
Sbjct: 148 ELAFQLAEQFRALGSAVHLRITVVVGGMDMLRQAKELAARPHLVIATPGRIHALLRNNPD 207
Query: 334 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 393
F VLDEADR+++ G EL+ I LP
Sbjct: 208 IPPVFSRTKFLVLDEADRVLDVGFQEELRFIFQCLP------------------------ 243
Query: 394 KKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERA 439
+ RQ L FSAT + + + + ++ G ++ETL ++A
Sbjct: 244 ENRQNLFFSATTTSNLQKLRGRYQDKMYVYEAYEGFKTVETLKQQA 289
>gi|134300131|ref|YP_001113627.1| DEAD/DEAH box helicase [Desulfotomaculum reducens MI-1]
gi|134052831|gb|ABO50802.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum reducens
MI-1]
Length = 482
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 125/233 (53%), Gaps = 49/233 (21%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
++ EL L + +SI +GF+E TPIQ+ IP A G D+IG A TG+GKT AFG+P+
Sbjct: 3 SFYELGLSKSVSESIKLMGFEEATPIQEKAIPIALSGG--DLIGQAHTGTGKTAAFGIPM 60
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
++R +++ ++ LIITPTRELA+QV + + + + +
Sbjct: 61 VERFSRQQDT--------------------IQGLIITPTRELAVQVAEEMNRIGQVKGIH 100
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+P+ GG +Q R LK +P ++VGTPGRL + M ++ + L+ L+ VLDEAD M+
Sbjct: 101 TLPVYGGQDINRQIRALKKKPHIIVGTPGRLMDHM---KRKTIRLNELTMVVLDEADEML 157
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
G +++ I+ +P ++RQTL+FSATI+
Sbjct: 158 NMGFIEDIEEILQQVP------------------------EERQTLLFSATIS 186
>gi|327403899|ref|YP_004344737.1| DEAD/DEAH box helicase domain-containing protein [Fluviicola
taffensis DSM 16823]
gi|327319407|gb|AEA43899.1| DEAD/DEAH box helicase domain protein [Fluviicola taffensis DSM
16823]
Length = 375
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 123/232 (53%), Gaps = 44/232 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
++EL L P L+ ++ L + PTPIQ+ IP+ QGK D+ G A+TG+GKT AF LPI+
Sbjct: 3 FDELNLLPHLLDALKELEYTTPTPIQEQSIPSLL-QGK-DLFGCAQTGTGKTAAFALPIL 60
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
Q L + + GK +R L++ PTRELA Q+ D K K +R
Sbjct: 61 QHLDPDGQVKGKR---------------PIRCLVLAPTRELANQINDSFKSYGKHSKLRS 105
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+ I GG++ KQ L A +++V TPGRL +LM+ G ++L ++ FVLDEADRM++
Sbjct: 106 MVIFGGVNQNKQVNQLNAGIDILVATPGRLLDLMNQGH---IQLSKITHFVLDEADRMLD 162
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 406
G +++ I+ LP K +Q + FSATI+
Sbjct: 163 MGFIHDIKKILPRLP------------------------KNKQNIFFSATIS 190
>gi|393240212|gb|EJD47739.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 778
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 123/238 (51%), Gaps = 43/238 (18%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLP 232
D++ + L ++K++ L F PTPIQ + IP A GK DI+G A TGSGKT AF +P
Sbjct: 173 DSFLSMNLSRPILKALTALNFHTPTPIQASTIPVAL-LGK-DIVGNAVTGSGKTAAFVIP 230
Query: 233 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 292
+++RLL +K + A R +I+ PTRELA+Q D ++A +V
Sbjct: 231 MLERLL---------YRDKSKNA------AATRCVILVPTRELAVQCFDVATKLAAHTDV 275
Query: 293 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 352
R IVGG+S + QE L+ RP++V+ TPGRL + + + L + VLDEADRM
Sbjct: 276 RFCLIVGGLSVKAQEASLRLRPDVVIATPGRLIDHLRNAPQ--FGLDAVDILVLDEADRM 333
Query: 353 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 410
+ +G EL I+ P + RQT++FSAT+ S D
Sbjct: 334 LSDGFADELAEIVQACP------------------------RGRQTMLFSATMTDSVD 367
>gi|343493741|ref|ZP_08732041.1| ATP-dependent RNA helicase RhlE [Vibrio nigripulchritudo ATCC
27043]
gi|342825883|gb|EGU60344.1| ATP-dependent RNA helicase RhlE [Vibrio nigripulchritudo ATCC
27043]
Length = 485
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 128/239 (53%), Gaps = 47/239 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPI 233
+++ L L P L+++I LG++ P+PIQ IP QG+ D++ AA+TG+GKT F LP+
Sbjct: 2 SFSSLGLSPELLRAIEELGYETPSPIQAQAIPPVI-QGR-DVMAAAQTGTGKTAGFTLPL 59
Query: 234 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 293
+QRL AG K A H+RAL++TPTRELA QV + + K +NV
Sbjct: 60 LQRL------AGG----------KSAKSNHVRALVLTPTRELAAQVNGSVVKYGKYLNVN 103
Query: 294 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 353
+ GG+ Q L+ +++V TPGRL +L +++ V+ L VLDEADRM+
Sbjct: 104 SNVVFGGVKINPQMMKLRKGSDVLVATPGRLLDLY---QQNAVKFSQLEVLVLDEADRML 160
Query: 354 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 412
+ G R+++ I+ +LP +KRQ L+FSAT S D R
Sbjct: 161 DMGFIRDIKKILALLP------------------------EKRQNLLFSAT--FSDDIR 193
>gi|269798436|ref|YP_003312336.1| DEAD/DEAH box helicase [Veillonella parvula DSM 2008]
gi|416998583|ref|ZP_11939344.1| DEAD-box ATP-dependent RNA helicase CshA [Veillonella parvula
ACS-068-V-Sch12]
gi|269095065|gb|ACZ25056.1| DEAD/DEAH box helicase domain protein [Veillonella parvula DSM
2008]
gi|333977481|gb|EGL78339.1| DEAD-box ATP-dependent RNA helicase CshA [Veillonella parvula
ACS-068-V-Sch12]
Length = 515
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 124/231 (53%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKVDIIGAAETGSGKTLAFGLPIM 234
+ +L + +++++ +GF+EPTPIQ+ IP A GK D+IG A+TG+GKT AFGLP++
Sbjct: 5 FEQLMISEPVLRALNDMGFEEPTPIQQEAIPVAM-SGK-DMIGQAQTGTGKTAAFGLPVL 62
Query: 235 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 294
+R+ G E H++ +I++PTRELA+QV + L ++A+ N+
Sbjct: 63 ERV-------------DGNER-------HVQVVILSPTRELAIQVAEELNKMAQYTNITA 102
Query: 295 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 354
+PI GG +Q R LK P+++V TPGRL + M G H + + VLDEAD M+
Sbjct: 103 LPIYGGQDINRQFRALKKNPQIIVATPGRLMDHMDRGSIHFDHVKVV---VLDEADEMLN 159
Query: 355 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 405
G ++ I+ +P + QTL+FSAT+
Sbjct: 160 MGFVDDINKILGAIP------------------------EDHQTLLFSATM 186
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.129 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,383,643,468
Number of Sequences: 23463169
Number of extensions: 329859812
Number of successful extensions: 2027027
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18129
Number of HSP's successfully gapped in prelim test: 15741
Number of HSP's that attempted gapping in prelim test: 1788074
Number of HSP's gapped (non-prelim): 118162
length of query: 466
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 320
effective length of database: 8,933,572,693
effective search space: 2858743261760
effective search space used: 2858743261760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 79 (35.0 bits)