Query 012321
Match_columns 466
No_of_seqs 454 out of 2917
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 01:24:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012321.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012321hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0626 MetC Cystathionine bet 100.0 1.4E-67 3.1E-72 541.8 33.8 311 152-464 7-319 (396)
2 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 3.4E-65 7.3E-70 528.1 34.0 308 154-464 1-311 (386)
3 COG2873 MET17 O-acetylhomoseri 100.0 8.9E-65 1.9E-69 503.5 29.5 309 152-464 7-349 (426)
4 PRK08114 cystathionine beta-ly 100.0 1E-63 2.2E-68 518.1 35.0 310 152-464 5-317 (395)
5 PRK05967 cystathionine beta-ly 100.0 1.3E-61 2.8E-66 502.7 34.3 306 152-464 12-317 (395)
6 PRK09028 cystathionine beta-ly 100.0 2.8E-61 6.1E-66 500.6 35.0 309 152-463 4-313 (394)
7 PRK08861 cystathionine gamma-s 100.0 1.1E-59 2.4E-64 488.3 33.9 302 152-464 5-307 (388)
8 PRK06702 O-acetylhomoserine am 100.0 4.5E-59 9.8E-64 488.5 33.8 308 153-464 7-348 (432)
9 KOG0053 Cystathionine beta-lya 100.0 2.8E-59 6.1E-64 475.7 28.8 313 148-464 17-331 (409)
10 PRK08249 cystathionine gamma-s 100.0 1E-57 2.2E-62 475.6 36.0 310 152-464 8-317 (398)
11 PRK07810 O-succinylhomoserine 100.0 4.1E-57 9E-62 471.7 35.7 309 152-464 15-324 (403)
12 TIGR01324 cysta_beta_ly_B cyst 100.0 6.7E-57 1.4E-61 466.3 35.1 303 155-464 1-303 (377)
13 PRK08045 cystathionine gamma-s 100.0 1.4E-56 3.1E-61 465.3 34.9 303 151-464 3-306 (386)
14 PRK08248 O-acetylhomoserine am 100.0 1.7E-56 3.8E-61 470.4 34.6 309 153-464 9-351 (431)
15 TIGR01328 met_gam_lyase methio 100.0 2.7E-56 5.9E-61 464.0 35.1 309 153-464 4-314 (391)
16 PRK07812 O-acetylhomoserine am 100.0 3.4E-56 7.4E-61 468.3 35.2 309 153-464 14-355 (436)
17 PRK05613 O-acetylhomoserine am 100.0 6.9E-56 1.5E-60 466.1 34.4 309 153-464 14-360 (437)
18 PRK06084 O-acetylhomoserine am 100.0 1.2E-55 2.6E-60 463.4 35.0 309 153-464 3-346 (425)
19 PRK05939 hypothetical protein; 100.0 1.5E-55 3.3E-60 459.0 33.8 294 169-464 6-321 (397)
20 PRK07503 methionine gamma-lyas 100.0 3.5E-55 7.6E-60 457.4 34.7 309 153-464 10-320 (403)
21 TIGR02080 O_succ_thio_ly O-suc 100.0 3.8E-55 8.2E-60 454.1 34.6 302 152-464 3-305 (382)
22 PRK08134 O-acetylhomoserine am 100.0 5.1E-55 1.1E-59 459.4 35.6 310 152-464 8-351 (433)
23 PRK07050 cystathionine beta-ly 100.0 5.7E-55 1.2E-59 454.5 35.4 311 151-464 8-319 (394)
24 PRK07049 methionine gamma-lyas 100.0 5.5E-55 1.2E-59 458.8 35.3 310 153-464 18-350 (427)
25 PRK08133 O-succinylhomoserine 100.0 1E-54 2.2E-59 452.1 35.6 308 153-464 7-314 (390)
26 PRK07504 O-succinylhomoserine 100.0 1.1E-54 2.4E-59 452.9 35.5 308 153-464 11-319 (398)
27 PRK06176 cystathionine gamma-s 100.0 1.5E-54 3.3E-59 449.3 34.2 300 153-464 3-303 (380)
28 TIGR01325 O_suc_HS_sulf O-succ 100.0 2.3E-54 5.1E-59 447.9 35.3 307 154-464 1-307 (380)
29 PRK08574 cystathionine gamma-s 100.0 2.2E-54 4.7E-59 448.8 34.0 303 153-464 3-308 (385)
30 PRK08776 cystathionine gamma-s 100.0 6.6E-54 1.4E-58 447.8 34.8 302 152-464 12-314 (405)
31 PRK07671 cystathionine beta-ly 100.0 1E-53 2.2E-58 442.7 35.3 300 153-464 3-303 (377)
32 PRK07811 cystathionine gamma-s 100.0 1.3E-53 2.8E-58 443.5 34.9 302 153-464 13-315 (388)
33 PRK06234 methionine gamma-lyas 100.0 1.7E-53 3.6E-58 444.3 35.5 309 153-464 9-321 (400)
34 PRK05994 O-acetylhomoserine am 100.0 1.8E-53 3.9E-58 447.4 35.1 310 152-464 7-350 (427)
35 PLN02509 cystathionine beta-ly 100.0 2.3E-53 5E-58 449.0 34.0 299 153-464 87-386 (464)
36 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 4.3E-53 9.2E-58 443.6 34.0 309 153-464 2-343 (418)
37 PRK06460 hypothetical protein; 100.0 7.1E-53 1.5E-57 436.3 34.4 297 152-464 2-298 (376)
38 cd00614 CGS_like CGS_like: Cys 100.0 7.5E-53 1.6E-57 434.8 34.0 293 171-464 1-294 (369)
39 PRK06767 methionine gamma-lyas 100.0 1.1E-52 2.4E-57 436.2 34.5 304 152-464 5-309 (386)
40 PRK06434 cystathionine gamma-l 100.0 1.3E-52 2.9E-57 434.5 32.2 302 151-464 7-309 (384)
41 PRK07582 cystathionine gamma-l 100.0 2.3E-52 5E-57 431.0 33.5 298 152-464 3-301 (366)
42 TIGR01329 cysta_beta_ly_E cyst 100.0 6.3E-52 1.4E-56 429.5 33.9 299 153-464 1-300 (378)
43 PLN02242 methionine gamma-lyas 100.0 6.7E-52 1.5E-56 434.2 34.0 307 152-464 17-335 (418)
44 PRK08064 cystathionine beta-ly 100.0 1.9E-51 4.2E-56 427.5 34.1 300 153-464 7-307 (390)
45 PRK05968 hypothetical protein; 100.0 1E-49 2.2E-54 414.5 33.3 300 155-464 11-311 (389)
46 PRK07269 cystathionine gamma-s 100.0 1E-49 2.2E-54 411.0 31.8 283 152-464 6-289 (364)
47 PRK08247 cystathionine gamma-s 100.0 8.6E-47 1.9E-51 389.4 32.7 285 152-464 4-289 (366)
48 TIGR00474 selA seryl-tRNA(sec) 99.9 1E-25 2.2E-30 238.2 23.2 212 210-427 122-371 (454)
49 PRK04311 selenocysteine syntha 99.9 1.7E-24 3.7E-29 229.4 21.1 213 210-428 127-377 (464)
50 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.2E-23 4.8E-28 216.6 25.3 251 176-432 25-304 (387)
51 COG0436 Aspartate/tyrosine/aro 99.9 7.2E-23 1.6E-27 213.4 27.9 220 211-436 70-321 (393)
52 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 5.5E-23 1.2E-27 211.1 25.9 223 204-432 38-285 (361)
53 PLN03227 serine palmitoyltrans 99.9 2.6E-22 5.6E-27 209.3 24.9 212 204-426 39-280 (392)
54 PRK06207 aspartate aminotransf 99.9 9.8E-22 2.1E-26 205.5 26.6 217 208-430 80-327 (405)
55 PRK07324 transaminase; Validat 99.9 1.6E-21 3.6E-26 201.6 26.5 224 202-433 56-301 (373)
56 PRK05957 aspartate aminotransf 99.9 1.3E-21 2.9E-26 203.2 25.9 217 208-430 67-309 (389)
57 PRK14807 histidinol-phosphate 99.9 1.3E-21 2.9E-26 200.4 25.4 221 204-431 53-286 (351)
58 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2E-21 4.4E-26 200.6 26.5 214 209-428 50-288 (370)
59 COG0079 HisC Histidinol-phosph 99.9 5.4E-22 1.2E-26 204.1 21.8 224 203-433 50-287 (356)
60 COG0520 csdA Selenocysteine ly 99.9 3.7E-21 8.1E-26 201.0 26.7 247 202-465 58-343 (405)
61 cd06454 KBL_like KBL_like; thi 99.9 3.4E-21 7.3E-26 195.4 25.0 213 207-427 43-273 (349)
62 PRK07681 aspartate aminotransf 99.9 3.5E-21 7.6E-26 200.6 25.6 218 201-427 63-312 (399)
63 PRK06290 aspartate aminotransf 99.9 3.7E-21 8.1E-26 201.6 24.9 212 210-427 81-323 (410)
64 PLN02721 threonine aldolase 99.9 1.1E-20 2.4E-25 192.1 27.3 220 208-431 38-281 (353)
65 KOG0257 Kynurenine aminotransf 99.9 2.2E-21 4.7E-26 197.0 21.1 220 202-427 63-326 (420)
66 PRK10874 cysteine sulfinate de 99.9 5.9E-21 1.3E-25 198.7 24.9 220 209-432 62-320 (401)
67 TIGR01822 2am3keto_CoA 2-amino 99.9 8.5E-21 1.8E-25 196.5 25.9 212 209-427 82-312 (393)
68 cd06453 SufS_like Cysteine des 99.9 7.4E-21 1.6E-25 195.4 24.5 220 210-433 43-300 (373)
69 cd06502 TA_like Low-specificit 99.9 7.7E-21 1.7E-25 192.2 23.7 218 208-429 30-269 (338)
70 PRK06108 aspartate aminotransf 99.9 1.6E-20 3.5E-25 193.5 26.5 216 209-430 64-308 (382)
71 TIGR03540 DapC_direct LL-diami 99.9 1.6E-20 3.5E-25 194.2 26.1 210 212-427 69-310 (383)
72 PRK01688 histidinol-phosphate 99.9 1.9E-21 4E-26 199.5 18.7 223 204-433 51-291 (351)
73 PRK12414 putative aminotransfe 99.9 2.8E-20 6.1E-25 193.0 27.2 213 209-427 69-307 (384)
74 PLN03026 histidinol-phosphate 99.9 7.5E-21 1.6E-25 197.2 22.8 217 205-430 81-313 (380)
75 PRK07179 hypothetical protein; 99.9 1E-20 2.2E-25 197.6 23.8 212 208-427 97-322 (407)
76 PRK09276 LL-diaminopimelate am 99.9 1.4E-20 2.9E-25 194.9 24.4 210 212-427 71-312 (385)
77 PRK04781 histidinol-phosphate 99.9 8.8E-21 1.9E-25 195.5 22.8 223 204-433 53-298 (364)
78 PRK05764 aspartate aminotransf 99.9 3.9E-20 8.4E-25 191.7 27.7 215 211-431 69-315 (393)
79 TIGR01437 selA_rel uncharacter 99.9 9.2E-21 2E-25 195.6 22.2 221 208-433 43-288 (363)
80 PRK08960 hypothetical protein; 99.9 5.7E-20 1.2E-24 190.6 28.1 212 211-428 70-309 (387)
81 PRK06348 aspartate aminotransf 99.9 4.9E-20 1.1E-24 191.0 27.4 212 213-430 69-310 (384)
82 PLN00175 aminotransferase fami 99.9 5.1E-20 1.1E-24 193.2 27.6 210 212-427 93-332 (413)
83 PRK04870 histidinol-phosphate 99.9 1.5E-20 3.3E-25 192.5 23.0 218 205-430 58-290 (356)
84 PRK09147 succinyldiaminopimela 99.9 5.3E-20 1.2E-24 191.4 27.4 211 211-427 70-317 (396)
85 PRK09295 bifunctional cysteine 99.9 3.3E-20 7.2E-25 193.5 25.1 220 209-432 66-325 (406)
86 TIGR01977 am_tr_V_EF2568 cyste 99.9 7.3E-20 1.6E-24 188.1 27.1 219 210-431 44-293 (376)
87 PRK08361 aspartate aminotransf 99.9 4.5E-20 9.7E-25 191.6 25.6 216 209-430 69-315 (391)
88 TIGR03537 DapC succinyldiamino 99.9 4.7E-20 1E-24 188.8 25.3 210 212-427 38-278 (350)
89 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3.2E-20 7E-25 192.6 24.4 211 208-429 31-276 (379)
90 TIGR01141 hisC histidinol-phos 99.9 2.5E-20 5.3E-25 189.8 23.0 219 205-431 49-284 (346)
91 TIGR03392 FeS_syn_CsdA cystein 99.9 5E-20 1.1E-24 191.5 25.7 168 210-381 60-240 (398)
92 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.4E-20 3E-25 191.4 20.9 215 203-430 40-267 (330)
93 PRK05942 aspartate aminotransf 99.9 4.1E-20 9E-25 192.2 24.9 209 213-427 76-316 (394)
94 PRK08068 transaminase; Reviewe 99.9 6.5E-20 1.4E-24 190.3 26.2 213 209-427 69-313 (389)
95 PRK15481 transcriptional regul 99.9 3.5E-20 7.6E-25 195.0 24.0 208 213-427 124-356 (431)
96 PRK07366 succinyldiaminopimela 99.9 5E-20 1.1E-24 191.0 24.5 210 212-427 70-312 (388)
97 PRK07337 aminotransferase; Val 99.9 1E-19 2.2E-24 188.7 26.8 210 212-427 69-306 (388)
98 TIGR01979 sufS cysteine desulf 99.9 5E-20 1.1E-24 191.5 24.6 218 210-431 62-318 (403)
99 PLN00145 tyrosine/nicotianamin 99.9 7.6E-20 1.7E-24 192.9 25.8 214 211-431 95-347 (430)
100 PRK06425 histidinol-phosphate 99.9 2.3E-20 5E-25 189.9 21.2 211 204-427 34-262 (332)
101 KOG1368 Threonine aldolase [Am 99.9 2.1E-20 4.5E-25 182.1 19.5 254 178-438 26-304 (384)
102 TIGR00858 bioF 8-amino-7-oxono 99.9 1.2E-19 2.6E-24 184.4 26.1 212 209-428 60-289 (360)
103 PLN02855 Bifunctional selenocy 99.9 9.4E-20 2E-24 191.3 25.9 168 210-381 76-256 (424)
104 PRK09082 methionine aminotrans 99.9 1.3E-19 2.9E-24 187.9 26.7 212 210-427 71-309 (386)
105 PRK04635 histidinol-phosphate 99.9 1.4E-20 3.1E-25 192.9 19.1 217 204-430 54-289 (354)
106 PRK03158 histidinol-phosphate 99.9 2.2E-20 4.9E-25 191.4 20.4 213 207-427 61-292 (359)
107 PRK07682 hypothetical protein; 99.9 9.1E-20 2E-24 188.3 25.0 212 210-427 57-299 (378)
108 PRK07550 hypothetical protein; 99.9 7.1E-20 1.5E-24 189.7 24.2 213 212-430 73-312 (386)
109 PLN02187 rooty/superroot1 99.9 1.7E-19 3.6E-24 192.0 27.5 215 210-430 108-360 (462)
110 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.3E-19 2.7E-24 188.0 25.8 169 209-382 59-239 (397)
111 COG1168 MalY Bifunctional PLP- 99.9 2.1E-19 4.5E-24 181.0 26.2 254 174-432 27-313 (388)
112 PLN02656 tyrosine transaminase 99.9 1.2E-19 2.6E-24 189.9 25.7 212 211-429 74-324 (409)
113 PLN02483 serine palmitoyltrans 99.9 1.4E-19 3E-24 193.9 26.2 211 209-427 145-388 (489)
114 PRK13392 5-aminolevulinate syn 99.9 6.3E-20 1.4E-24 191.8 23.1 210 210-427 91-319 (410)
115 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.3E-19 2.9E-24 187.6 25.2 212 209-431 28-282 (380)
116 PRK02610 histidinol-phosphate 99.9 6.1E-20 1.3E-24 189.8 22.5 219 206-431 62-308 (374)
117 PRK01533 histidinol-phosphate 99.9 1.6E-20 3.5E-25 193.9 18.1 213 206-427 60-292 (366)
118 PLN02368 alanine transaminase 99.9 1.4E-19 3E-24 189.7 25.2 214 213-432 110-382 (407)
119 TIGR03538 DapC_gpp succinyldia 99.9 2.4E-19 5.1E-24 186.4 26.7 210 212-427 66-316 (393)
120 TIGR01825 gly_Cac_T_rel pyrido 99.9 1.9E-19 4.1E-24 185.8 25.6 218 202-427 70-304 (385)
121 PTZ00433 tyrosine aminotransfe 99.9 2E-19 4.3E-24 188.4 26.0 218 206-430 70-331 (412)
122 PRK06225 aspartate aminotransf 99.8 3.2E-19 7E-24 184.4 27.1 219 205-430 60-300 (380)
123 PRK05664 threonine-phosphate d 99.8 8.6E-20 1.9E-24 185.7 22.4 205 207-427 47-262 (330)
124 PRK10534 L-threonine aldolase; 99.8 1.9E-19 4.2E-24 182.4 24.8 216 205-427 28-266 (333)
125 PRK09105 putative aminotransfe 99.8 7E-20 1.5E-24 189.4 21.8 212 206-427 74-302 (370)
126 PRK06939 2-amino-3-ketobutyrat 99.8 1.6E-19 3.4E-24 186.5 24.4 212 209-427 86-316 (397)
127 PRK13355 bifunctional HTH-doma 99.8 1.7E-19 3.7E-24 194.4 25.6 213 212-431 187-437 (517)
128 cd00616 AHBA_syn 3-amino-5-hyd 99.8 2.3E-19 4.9E-24 182.5 25.1 213 208-431 16-255 (352)
129 PRK00950 histidinol-phosphate 99.8 3.5E-20 7.7E-25 189.7 19.1 213 205-425 64-291 (361)
130 PRK07777 aminotransferase; Val 99.8 4.1E-19 8.9E-24 184.1 27.3 210 212-427 63-305 (387)
131 PRK07309 aromatic amino acid a 99.8 1.1E-18 2.4E-23 181.5 30.1 211 212-427 69-310 (391)
132 TIGR01264 tyr_amTase_E tyrosin 99.8 2.3E-19 5E-24 186.9 24.9 215 209-430 72-322 (401)
133 PRK03321 putative aminotransfe 99.8 3.6E-20 7.8E-25 189.4 18.4 215 205-427 52-286 (352)
134 PRK08153 histidinol-phosphate 99.8 7.9E-20 1.7E-24 188.7 21.0 215 207-428 64-294 (369)
135 PRK03317 histidinol-phosphate 99.8 6.1E-20 1.3E-24 189.0 20.1 218 204-428 59-299 (368)
136 PRK03967 histidinol-phosphate 99.8 1.4E-19 3E-24 184.7 22.5 213 203-427 48-274 (337)
137 PRK08912 hypothetical protein; 99.8 4.9E-19 1.1E-23 183.5 26.8 210 212-427 65-305 (387)
138 TIGR01265 tyr_nico_aTase tyros 99.8 3.9E-19 8.4E-24 185.6 26.1 215 210-431 73-325 (403)
139 PRK02731 histidinol-phosphate 99.8 6.4E-20 1.4E-24 188.4 19.7 216 204-427 61-295 (367)
140 TIGR02379 ECA_wecE TDP-4-keto- 99.8 8E-19 1.7E-23 182.1 27.9 210 209-428 30-272 (376)
141 PRK07683 aminotransferase A; V 99.8 9.2E-19 2E-23 181.8 28.4 212 210-427 65-306 (387)
142 PRK05387 histidinol-phosphate 99.8 1.2E-19 2.7E-24 185.2 21.5 214 205-428 55-284 (353)
143 PF00155 Aminotran_1_2: Aminot 99.8 1.7E-19 3.7E-24 184.3 22.6 216 205-427 38-295 (363)
144 COG1104 NifS Cysteine sulfinat 99.8 1.5E-19 3.3E-24 184.7 21.3 249 178-431 7-284 (386)
145 PRK05958 8-amino-7-oxononanoat 99.8 7.3E-19 1.6E-23 180.7 26.3 216 204-427 78-310 (385)
146 PRK06107 aspartate aminotransf 99.8 1E-18 2.3E-23 182.3 27.2 215 210-430 74-317 (402)
147 PRK08363 alanine aminotransfer 99.8 1.4E-18 3E-23 181.0 28.0 217 209-431 69-319 (398)
148 PLN00143 tyrosine/nicotianamin 99.8 7.3E-19 1.6E-23 184.1 25.9 211 212-429 76-325 (409)
149 cd00615 Orn_deC_like Ornithine 99.8 1.7E-19 3.7E-24 180.7 20.3 217 202-425 51-293 (294)
150 PRK08056 threonine-phosphate d 99.8 2.2E-19 4.8E-24 184.3 21.6 215 206-430 51-286 (356)
151 PRK09148 aminotransferase; Val 99.8 6.6E-19 1.4E-23 184.1 25.5 210 212-427 70-311 (405)
152 TIGR01821 5aminolev_synth 5-am 99.8 4.9E-19 1.1E-23 184.5 24.3 212 208-427 88-318 (402)
153 PTZ00377 alanine aminotransfer 99.8 7.6E-19 1.6E-23 187.8 25.9 214 212-431 117-389 (481)
154 PRK07865 N-succinyldiaminopime 99.8 5E-19 1.1E-23 182.0 23.6 206 211-427 67-295 (364)
155 COG2008 GLY1 Threonine aldolas 99.8 7.2E-19 1.6E-23 176.5 23.4 250 177-433 3-277 (342)
156 PRK08175 aminotransferase; Val 99.8 4.7E-19 1E-23 184.4 23.1 212 212-428 69-311 (395)
157 PRK07568 aspartate aminotransf 99.8 9.4E-19 2E-23 181.6 25.1 213 211-430 67-311 (397)
158 PRK05166 histidinol-phosphate 99.8 2.8E-19 6.2E-24 184.5 21.1 215 205-427 66-302 (371)
159 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 2.6E-18 5.7E-23 177.9 28.3 210 209-428 30-271 (375)
160 PF01041 DegT_DnrJ_EryC1: DegT 99.8 5.1E-19 1.1E-23 182.5 22.9 217 209-436 24-269 (363)
161 TIGR03539 DapC_actino succinyl 99.8 6.6E-19 1.4E-23 180.9 23.6 205 212-427 62-289 (357)
162 PRK09265 aminotransferase AlaT 99.8 1.2E-18 2.6E-23 181.8 25.7 212 212-430 74-323 (404)
163 PF00266 Aminotran_5: Aminotra 99.8 1.2E-18 2.5E-23 179.6 25.1 245 204-465 37-319 (371)
164 PLN02651 cysteine desulfurase 99.8 2.7E-19 5.8E-24 184.1 20.3 222 205-431 38-283 (364)
165 PRK13034 serine hydroxymethylt 99.8 7.9E-19 1.7E-23 184.5 24.2 221 200-427 58-305 (416)
166 PRK06959 putative threonine-ph 99.8 3.9E-19 8.5E-24 181.7 21.1 208 204-427 48-268 (339)
167 cd06451 AGAT_like Alanine-glyo 99.8 7E-19 1.5E-23 179.6 22.9 215 209-427 31-278 (356)
168 PRK02948 cysteine desulfurase; 99.8 3.1E-19 6.7E-24 184.4 19.6 216 208-428 41-277 (381)
169 TIGR03576 pyridox_MJ0158 pyrid 99.8 1.5E-18 3.3E-23 178.1 23.9 206 208-426 52-272 (346)
170 PLN02450 1-aminocyclopropane-1 99.8 1E-18 2.3E-23 186.2 22.9 210 212-427 88-347 (468)
171 TIGR03403 nifS_epsilon cystein 99.8 7.3E-19 1.6E-23 181.8 21.1 220 209-433 38-284 (382)
172 PRK08636 aspartate aminotransf 99.8 3E-18 6.6E-23 178.9 25.8 211 212-427 77-321 (403)
173 PRK09064 5-aminolevulinate syn 99.8 2.6E-18 5.7E-23 179.2 25.1 212 208-427 89-319 (407)
174 PRK07392 threonine-phosphate d 99.8 1E-18 2.2E-23 179.6 21.7 216 205-431 52-290 (360)
175 PLN02822 serine palmitoyltrans 99.8 3.1E-18 6.6E-23 183.1 26.1 214 208-429 152-389 (481)
176 PRK13393 5-aminolevulinate syn 99.8 3.1E-18 6.7E-23 179.0 25.5 211 209-427 89-318 (406)
177 TIGR03235 DNA_S_dndA cysteine 99.8 1.8E-18 3.9E-23 176.9 22.9 216 210-431 42-283 (353)
178 PRK06358 threonine-phosphate d 99.8 2.2E-18 4.9E-23 176.9 23.5 215 205-430 49-287 (354)
179 COG0399 WecE Predicted pyridox 99.8 3.5E-18 7.5E-23 175.6 24.2 210 209-429 33-270 (374)
180 PRK14809 histidinol-phosphate 99.8 1.5E-18 3.3E-23 178.0 21.2 210 208-426 63-291 (357)
181 PRK14808 histidinol-phosphate 99.8 1.3E-18 2.9E-23 177.5 20.6 210 204-427 50-272 (335)
182 PRK05839 hypothetical protein; 99.8 2.8E-18 6.2E-23 177.4 22.6 209 210-425 64-302 (374)
183 cd00609 AAT_like Aspartate ami 99.8 8.9E-18 1.9E-22 168.9 24.7 217 208-430 34-281 (350)
184 PLN02231 alanine transaminase 99.8 9.5E-18 2.1E-22 181.3 26.2 217 210-431 172-441 (534)
185 PLN02409 serine--glyoxylate am 99.8 3.9E-18 8.4E-23 178.2 22.4 170 209-382 41-224 (401)
186 PRK00011 glyA serine hydroxyme 99.8 4.9E-18 1.1E-22 177.7 23.1 214 209-428 66-303 (416)
187 PRK15407 lipopolysaccharide bi 99.8 1E-17 2.3E-22 177.1 25.5 209 209-429 62-330 (438)
188 PRK06855 aminotransferase; Val 99.8 1E-17 2.2E-22 176.8 24.9 214 211-430 78-328 (433)
189 PRK06836 aspartate aminotransf 99.8 1.2E-17 2.5E-22 174.0 24.8 211 210-427 73-319 (394)
190 cd00378 SHMT Serine-glycine hy 99.8 8.1E-18 1.8E-22 174.9 23.6 214 208-427 59-298 (402)
191 cd00613 GDC-P Glycine cleavage 99.8 1.5E-17 3.2E-22 172.5 24.9 219 210-430 64-330 (398)
192 COG1167 ARO8 Transcriptional r 99.8 1.3E-17 2.7E-22 177.5 24.7 221 209-436 135-383 (459)
193 PRK07590 L,L-diaminopimelate a 99.8 1.1E-17 2.5E-22 174.8 23.9 213 209-427 75-335 (409)
194 PLN02376 1-aminocyclopropane-1 99.8 1.2E-17 2.6E-22 179.3 24.2 211 211-427 99-354 (496)
195 PRK00854 rocD ornithine--oxo-a 99.8 2.2E-17 4.8E-22 172.0 25.5 217 207-428 80-328 (401)
196 PRK14012 cysteine desulfurase; 99.8 6.2E-18 1.3E-22 176.5 21.1 216 210-431 49-288 (404)
197 TIGR02006 IscS cysteine desulf 99.8 6.6E-18 1.4E-22 176.3 21.1 218 209-431 46-286 (402)
198 PRK13238 tnaA tryptophanase/L- 99.8 1.6E-17 3.6E-22 176.5 24.3 215 203-427 73-335 (460)
199 COG0156 BioF 7-keto-8-aminopel 99.8 2.2E-17 4.8E-22 170.7 24.2 212 208-427 82-313 (388)
200 PRK08354 putative aminotransfe 99.8 1.4E-17 2.9E-22 168.1 22.1 204 212-429 42-252 (311)
201 PTZ00376 aspartate aminotransf 99.8 1.4E-17 3.1E-22 173.9 22.8 212 212-428 74-338 (404)
202 PF01212 Beta_elim_lyase: Beta 99.8 8.2E-19 1.8E-23 175.9 12.6 239 186-430 7-273 (290)
203 TIGR03402 FeS_nifS cysteine de 99.8 9.2E-18 2E-22 173.3 20.7 217 209-432 41-280 (379)
204 PLN02607 1-aminocyclopropane-1 99.8 3.4E-17 7.4E-22 173.6 24.8 210 212-427 97-354 (447)
205 TIGR03542 DAPAT_plant LL-diami 99.8 2E-17 4.3E-22 172.7 22.2 213 209-427 74-328 (402)
206 cd01494 AAT_I Aspartate aminot 99.8 9.6E-18 2.1E-22 151.1 17.2 156 212-373 2-170 (170)
207 cd00617 Tnase_like Tryptophana 99.8 6.5E-17 1.4E-21 170.3 26.1 212 208-427 51-310 (431)
208 PRK13479 2-aminoethylphosphona 99.8 3.1E-17 6.6E-22 168.6 23.1 215 210-428 37-285 (368)
209 PRK09440 avtA valine--pyruvate 99.8 3.2E-17 6.9E-22 171.5 23.2 210 213-427 77-324 (416)
210 TIGR02326 transamin_PhnW 2-ami 99.8 3.8E-17 8.2E-22 167.7 23.0 214 210-427 35-283 (363)
211 cd06450 DOPA_deC_like DOPA dec 99.8 2.1E-17 4.6E-22 167.7 20.6 207 202-433 30-273 (345)
212 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 4.7E-17 1E-21 165.2 23.0 214 210-427 31-278 (355)
213 PRK09257 aromatic amino acid a 99.8 8.6E-17 1.9E-21 167.5 24.2 211 212-427 71-332 (396)
214 PRK00451 glycine dehydrogenase 99.8 5.5E-17 1.2E-21 171.5 21.4 214 212-431 114-375 (447)
215 PRK07908 hypothetical protein; 99.8 6.2E-17 1.3E-21 165.6 21.0 203 211-427 59-276 (349)
216 PLN02397 aspartate transaminas 99.7 1.5E-16 3.2E-21 167.5 23.5 212 211-427 92-355 (423)
217 PLN02672 methionine S-methyltr 99.7 2.5E-16 5.5E-21 179.3 26.0 212 211-427 735-989 (1082)
218 PRK13520 L-tyrosine decarboxyl 99.7 3.2E-16 7E-21 160.6 24.1 214 211-431 60-305 (371)
219 PLN02955 8-amino-7-oxononanoat 99.7 4.7E-16 1E-20 164.4 25.5 209 210-422 147-385 (476)
220 PRK05937 8-amino-7-oxononanoat 99.7 2.2E-16 4.7E-21 163.2 22.4 211 208-426 54-283 (370)
221 PRK09275 aspartate aminotransf 99.7 1.5E-16 3.3E-21 170.9 21.9 144 228-375 163-328 (527)
222 TIGR03812 tyr_de_CO2_Arch tyro 99.7 3.4E-16 7.4E-21 160.7 23.6 214 209-429 58-309 (373)
223 PRK03244 argD acetylornithine 99.7 5.7E-16 1.2E-20 161.2 24.4 218 204-426 79-321 (398)
224 TIGR03531 selenium_SpcS O-phos 99.7 6.8E-16 1.5E-20 162.8 24.5 212 210-427 105-344 (444)
225 TIGR03801 asp_4_decarbox aspar 99.7 5.3E-16 1.2E-20 166.5 24.1 144 228-375 157-327 (521)
226 PRK04073 rocD ornithine--oxo-a 99.7 7.7E-16 1.7E-20 160.5 23.8 217 207-427 79-326 (396)
227 PF06838 Met_gamma_lyase: Meth 99.7 1.5E-15 3.2E-20 152.9 22.3 223 200-428 47-297 (403)
228 PRK02769 histidine decarboxyla 99.7 1.5E-15 3.2E-20 157.9 23.2 234 201-438 56-321 (380)
229 PLN03032 serine decarboxylase; 99.7 9.7E-16 2.1E-20 158.7 21.6 234 197-437 53-323 (374)
230 cd00610 OAT_like Acetyl ornith 99.7 2.6E-15 5.6E-20 156.3 25.0 216 208-427 77-332 (413)
231 PTZ00094 serine hydroxymethylt 99.7 1.8E-15 4E-20 160.6 23.3 207 215-427 85-322 (452)
232 PRK04366 glycine dehydrogenase 99.7 1.3E-15 2.8E-20 163.0 21.9 212 210-427 113-368 (481)
233 TIGR01814 kynureninase kynuren 99.7 4.2E-15 9.1E-20 155.4 25.2 160 211-374 72-248 (406)
234 TIGR00707 argD acetylornithine 99.7 2.2E-15 4.7E-20 155.2 22.2 218 205-427 64-309 (379)
235 KOG1549 Cysteine desulfurase N 99.7 9.2E-16 2E-20 157.8 18.6 176 193-374 69-257 (428)
236 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 6.5E-16 1.4E-20 161.0 17.3 176 208-390 64-274 (417)
237 COG0075 Serine-pyruvate aminot 99.7 1.4E-14 3E-19 149.1 25.6 214 210-427 38-284 (383)
238 PTZ00125 ornithine aminotransf 99.7 1E-14 2.2E-19 151.7 25.0 216 208-426 71-317 (400)
239 TIGR02618 tyr_phenol_ly tyrosi 99.7 7.9E-15 1.7E-19 153.6 24.1 214 203-427 66-328 (450)
240 KOG0259 Tyrosine aminotransfer 99.7 1.5E-14 3.2E-19 145.6 24.6 217 209-431 102-356 (447)
241 PRK08637 hypothetical protein; 99.7 1.3E-14 2.9E-19 150.8 25.3 151 228-382 71-257 (388)
242 TIGR01788 Glu-decarb-GAD gluta 99.7 1.3E-14 2.8E-19 153.1 25.1 217 210-433 80-351 (431)
243 PRK02627 acetylornithine amino 99.7 4.1E-15 8.8E-20 154.2 20.8 217 204-425 75-319 (396)
244 PRK01278 argD acetylornithine 99.7 6.2E-15 1.3E-19 153.1 21.2 214 207-425 70-312 (389)
245 PLN02724 Molybdenum cofactor s 99.7 1.1E-14 2.4E-19 164.7 24.6 178 201-381 69-284 (805)
246 PLN03226 serine hydroxymethylt 99.7 4.5E-14 9.6E-19 150.8 27.1 214 208-427 74-333 (475)
247 PRK07505 hypothetical protein; 99.6 4E-14 8.6E-19 147.8 25.1 186 207-399 88-292 (402)
248 PRK13580 serine hydroxymethylt 99.6 1.4E-14 3.1E-19 153.5 20.4 206 216-428 101-359 (493)
249 PLN02414 glycine dehydrogenase 99.6 2.3E-14 4.9E-19 163.0 23.1 247 212-462 570-877 (993)
250 PLN02271 serine hydroxymethylt 99.6 4.2E-14 9.1E-19 151.0 22.6 222 201-428 179-455 (586)
251 PRK02936 argD acetylornithine 99.6 1E-13 2.2E-18 143.2 24.2 216 206-426 67-305 (377)
252 PRK15029 arginine decarboxylas 99.6 6.7E-14 1.4E-18 155.4 21.1 211 208-428 203-465 (755)
253 TIGR03246 arg_catab_astC succi 99.6 3.4E-13 7.3E-18 140.9 25.2 223 207-435 74-330 (397)
254 PRK05093 argD bifunctional N-s 99.6 1.3E-13 2.7E-18 144.2 21.9 216 208-427 80-323 (403)
255 TIGR01885 Orn_aminotrans ornit 99.6 5.1E-13 1.1E-17 139.5 25.5 216 208-427 77-326 (401)
256 PRK13237 tyrosine phenol-lyase 99.6 3.5E-13 7.7E-18 141.6 23.2 215 201-427 71-335 (460)
257 PF00464 SHMT: Serine hydroxym 99.6 8.3E-14 1.8E-18 144.6 17.6 208 215-428 71-320 (399)
258 KOG1360 5-aminolevulinate synt 99.6 1.3E-13 2.8E-18 139.2 17.4 212 208-427 214-446 (570)
259 PRK12381 bifunctional succinyl 99.6 8.9E-13 1.9E-17 138.1 24.3 216 206-427 77-322 (406)
260 COG0112 GlyA Glycine/serine hy 99.5 1.8E-13 4E-18 138.8 18.0 221 201-428 57-304 (413)
261 TIGR00713 hemL glutamate-1-sem 99.5 1.3E-12 2.9E-17 137.2 24.0 223 207-434 85-347 (423)
262 PRK13578 ornithine decarboxyla 99.5 2.9E-13 6.2E-18 149.2 19.5 175 209-390 173-395 (720)
263 TIGR00461 gcvP glycine dehydro 99.5 5.3E-13 1.1E-17 150.5 21.9 246 211-464 531-839 (939)
264 TIGR03799 NOD_PanD_pyr putativ 99.5 2.1E-12 4.6E-17 139.2 25.1 203 228-436 162-428 (522)
265 PLN02624 ornithine-delta-amino 99.5 2.4E-12 5.3E-17 137.6 24.4 199 205-406 112-341 (474)
266 PRK05367 glycine dehydrogenase 99.5 1.8E-12 4E-17 147.9 24.5 214 211-428 543-794 (954)
267 KOG0633 Histidinol phosphate a 99.5 2.5E-13 5.3E-18 130.9 14.5 223 208-437 67-307 (375)
268 PLN02263 serine decarboxylase 99.5 5.9E-12 1.3E-16 133.3 25.3 239 185-429 104-383 (470)
269 KOG0256 1-aminocyclopropane-1- 99.5 2.5E-12 5.4E-17 130.6 21.2 196 226-427 147-378 (471)
270 KOG2862 Alanine-glyoxylate ami 99.5 3.8E-12 8.2E-17 125.4 20.2 213 211-427 51-301 (385)
271 PLN02590 probable tyrosine dec 99.5 1.7E-11 3.7E-16 132.4 26.8 223 208-436 164-456 (539)
272 PLN02880 tyrosine decarboxylas 99.5 1E-11 2.2E-16 133.3 24.7 219 210-434 122-406 (490)
273 COG1103 Archaea-specific pyrid 99.5 4.5E-12 9.7E-17 122.9 19.5 217 209-431 60-302 (382)
274 PF03841 SelA: L-seryl-tRNA se 99.5 1.5E-13 3.2E-18 139.7 8.7 211 213-429 50-298 (367)
275 COG4992 ArgD Ornithine/acetylo 99.5 6.4E-12 1.4E-16 129.0 20.5 218 203-427 77-323 (404)
276 PLN00144 acetylornithine trans 99.5 2.5E-11 5.4E-16 126.4 25.4 225 207-435 54-318 (382)
277 PF00282 Pyridoxal_deC: Pyrido 99.4 4.6E-12 1E-16 131.6 19.3 225 208-438 73-365 (373)
278 PRK04612 argD acetylornithine 99.4 1.7E-11 3.6E-16 128.9 23.4 228 207-437 79-340 (408)
279 PRK03080 phosphoserine aminotr 99.4 3.6E-12 7.8E-17 132.4 18.1 158 210-381 48-216 (378)
280 KOG1359 Glycine C-acetyltransf 99.4 1.4E-12 2.9E-17 127.6 13.9 208 208-427 110-335 (417)
281 COG0076 GadB Glutamate decarbo 99.4 1.5E-11 3.3E-16 130.6 23.1 220 212-438 103-372 (460)
282 COG4100 Cystathionine beta-lya 99.4 2.9E-12 6.3E-17 125.7 16.0 178 199-380 57-256 (416)
283 PRK04260 acetylornithine amino 99.4 1.5E-11 3.2E-16 127.3 21.9 218 211-433 67-314 (375)
284 cd00611 PSAT_like Phosphoserin 99.4 1.2E-11 2.5E-16 127.5 19.9 205 210-430 44-281 (355)
285 PRK12566 glycine dehydrogenase 99.4 3.1E-11 6.7E-16 135.8 22.5 150 210-363 543-710 (954)
286 PRK03715 argD acetylornithine 99.4 5.9E-11 1.3E-15 124.2 22.8 213 206-426 74-316 (395)
287 PRK15399 lysine decarboxylase 99.4 2.1E-11 4.6E-16 134.4 20.2 172 209-390 194-399 (713)
288 TIGR01366 serC_3 phosphoserine 99.4 1.6E-11 3.4E-16 126.9 17.6 212 210-430 41-283 (361)
289 PRK15400 lysine decarboxylase 99.4 9.6E-12 2.1E-16 137.1 16.8 172 209-389 194-398 (714)
290 PRK00062 glutamate-1-semialdeh 99.4 6E-11 1.3E-15 125.3 21.9 223 207-433 87-348 (426)
291 PF00202 Aminotran_3: Aminotra 99.4 4.6E-11 1E-15 122.5 20.3 237 205-463 54-338 (339)
292 TIGR01364 serC_1 phosphoserine 99.4 5.6E-11 1.2E-15 122.4 20.7 213 201-429 25-272 (349)
293 TIGR03372 putres_am_tran putre 99.4 2.5E-10 5.4E-15 121.1 25.8 229 207-438 114-382 (442)
294 PRK04013 argD acetylornithine/ 99.3 9E-11 2E-15 121.5 21.4 194 205-407 61-274 (364)
295 PRK08360 4-aminobutyrate amino 99.3 4.3E-10 9.4E-15 119.4 26.4 226 208-437 82-357 (443)
296 PRK05964 adenosylmethionine--8 99.3 3.2E-10 6.9E-15 119.6 24.9 226 206-434 81-356 (423)
297 PRK08117 4-aminobutyrate amino 99.3 1.6E-10 3.5E-15 122.2 22.6 230 206-437 82-360 (433)
298 PRK05367 glycine dehydrogenase 99.3 6.7E-11 1.5E-15 135.2 20.6 159 212-380 123-292 (954)
299 PRK08593 4-aminobutyrate amino 99.3 4.8E-10 1E-14 119.1 25.7 228 207-438 82-361 (445)
300 PRK06777 4-aminobutyrate amino 99.3 4.9E-10 1.1E-14 118.2 25.4 226 204-433 77-347 (421)
301 PRK12403 putative aminotransfe 99.3 5.8E-10 1.3E-14 119.0 26.1 227 208-437 96-381 (460)
302 TIGR02617 tnaA_trp_ase tryptop 99.3 1.3E-10 2.9E-15 121.4 20.3 261 178-451 46-382 (467)
303 PRK09792 4-aminobutyrate trans 99.3 4.4E-10 9.6E-15 118.6 24.3 175 204-382 77-290 (421)
304 KOG1357 Serine palmitoyltransf 99.3 3.1E-11 6.7E-16 124.0 14.8 211 209-427 181-424 (519)
305 PRK11522 putrescine--2-oxoglut 99.3 5.3E-10 1.1E-14 119.2 24.3 228 207-437 121-388 (459)
306 PRK08088 4-aminobutyrate amino 99.3 3.7E-10 7.9E-15 119.2 22.6 229 207-437 81-352 (425)
307 PRK05355 3-phosphoserine/phosp 99.3 1.2E-10 2.5E-15 120.5 17.9 204 210-428 48-282 (360)
308 COG1921 SelA Selenocysteine sy 99.3 1.1E-10 2.5E-15 119.7 17.5 169 214-388 72-251 (395)
309 PRK07046 aminotransferase; Val 99.3 2.5E-09 5.5E-14 113.9 26.7 224 207-434 112-375 (453)
310 PRK06105 aminotransferase; Pro 99.3 1.9E-09 4E-14 115.1 25.6 231 204-437 86-378 (460)
311 COG1982 LdcC Arginine/lysine/o 99.2 2.1E-10 4.7E-15 122.4 17.9 156 211-373 71-246 (557)
312 PRK06058 4-aminobutyrate amino 99.2 2.4E-09 5.3E-14 113.7 25.6 227 207-437 96-372 (443)
313 KOG0634 Aromatic amino acid am 99.2 5E-10 1.1E-14 114.9 19.2 194 226-426 124-371 (472)
314 PRK06541 hypothetical protein; 99.2 1.6E-09 3.5E-14 115.5 23.9 226 206-434 91-375 (460)
315 TIGR00700 GABAtrnsam 4-aminobu 99.2 3.5E-09 7.6E-14 111.6 25.1 230 204-437 70-350 (420)
316 TIGR00709 dat 2,4-diaminobutyr 99.2 3.7E-09 8E-14 112.3 25.1 227 207-438 79-359 (442)
317 PRK12389 glutamate-1-semialdeh 99.2 6.7E-09 1.4E-13 109.9 26.5 223 207-433 90-351 (428)
318 PRK07495 4-aminobutyrate amino 99.2 1.8E-09 3.8E-14 114.2 21.9 231 206-438 79-352 (425)
319 PRK07986 adenosylmethionine--8 99.2 3.9E-09 8.5E-14 111.7 24.3 228 206-437 82-363 (428)
320 PLN02760 4-aminobutyrate:pyruv 99.2 6.7E-09 1.5E-13 112.0 26.2 228 207-437 130-420 (504)
321 PRK07482 hypothetical protein; 99.2 8.1E-09 1.8E-13 110.3 26.6 229 206-437 90-381 (461)
322 COG0403 GcvP Glycine cleavage 99.2 2.2E-09 4.9E-14 110.2 21.1 215 214-433 124-384 (450)
323 PRK09221 beta alanine--pyruvat 99.2 3.7E-09 7.9E-14 112.4 23.6 228 207-437 89-378 (445)
324 PRK05965 hypothetical protein; 99.2 7.3E-09 1.6E-13 110.6 25.9 229 207-438 87-376 (459)
325 PLN02414 glycine dehydrogenase 99.2 9.6E-10 2.1E-14 125.7 20.0 158 212-379 150-319 (993)
326 PRK06082 4-aminobutyrate amino 99.2 5.2E-09 1.1E-13 111.7 24.3 234 202-438 105-383 (459)
327 COG0001 HemL Glutamate-1-semia 99.2 2.7E-09 5.8E-14 110.9 21.1 222 200-426 84-341 (432)
328 COG3977 Alanine-alpha-ketoisov 99.2 8.2E-10 1.8E-14 108.7 16.2 181 202-387 70-277 (417)
329 PRK05769 4-aminobutyrate amino 99.2 1.1E-08 2.4E-13 108.7 25.5 224 206-435 93-370 (441)
330 PRK07678 aminotransferase; Val 99.2 8.8E-09 1.9E-13 109.7 24.8 228 207-437 86-373 (451)
331 PRK06173 adenosylmethionine--8 99.2 9.3E-09 2E-13 108.8 24.6 228 206-437 83-365 (429)
332 PF02347 GDC-P: Glycine cleava 99.1 1.4E-09 2.9E-14 114.0 17.5 209 212-427 112-364 (429)
333 PRK06943 adenosylmethionine--8 99.1 1.5E-08 3.2E-13 108.0 25.4 229 206-437 93-381 (453)
334 PRK06918 4-aminobutyrate amino 99.1 7.8E-09 1.7E-13 110.0 22.6 195 206-404 93-333 (451)
335 PRK05630 adenosylmethionine--8 99.1 1.5E-08 3.2E-13 107.1 24.4 226 207-437 80-360 (422)
336 PRK07480 putative aminotransfe 99.1 1.9E-08 4.2E-13 107.2 25.2 228 206-436 90-376 (456)
337 TIGR02407 ectoine_ectB diamino 99.1 1.5E-08 3.2E-13 106.8 24.0 166 208-376 76-281 (412)
338 PRK05639 4-aminobutyrate amino 99.1 2.8E-08 6.2E-13 106.0 26.2 225 208-437 94-374 (457)
339 PRK13360 omega amino acid--pyr 99.1 1.4E-08 3E-13 107.9 23.4 228 207-437 86-375 (442)
340 PRK07481 hypothetical protein; 99.1 2.9E-08 6.2E-13 105.7 25.8 228 207-437 83-374 (449)
341 PRK06149 hypothetical protein; 99.1 2.2E-08 4.9E-13 115.8 26.7 230 205-438 619-900 (972)
342 COG3844 Kynureninase [Amino ac 99.1 1.2E-09 2.5E-14 108.8 13.7 161 212-373 78-244 (407)
343 PRK09264 diaminobutyrate--2-ox 99.1 1E-08 2.2E-13 108.4 21.4 167 207-376 79-285 (425)
344 PRK06062 hypothetical protein; 99.1 2.6E-08 5.6E-13 106.2 24.5 234 202-438 87-372 (451)
345 TIGR00461 gcvP glycine dehydro 99.1 6.6E-09 1.4E-13 117.8 20.7 159 212-380 111-280 (939)
346 PRK07036 hypothetical protein; 99.1 4.9E-08 1.1E-12 104.5 25.9 227 207-436 92-380 (466)
347 PRK00615 glutamate-1-semialdeh 99.1 2E-08 4.4E-13 106.4 22.7 215 207-426 90-341 (433)
348 TIGR01365 serC_2 phosphoserine 99.1 4.6E-09 9.9E-14 109.2 17.4 205 210-428 39-283 (374)
349 TIGR00508 bioA adenosylmethion 99.1 2.8E-08 6.1E-13 105.1 23.2 217 207-427 85-353 (427)
350 PRK08742 adenosylmethionine--8 99.0 4.2E-08 9.2E-13 105.0 24.2 229 207-438 104-397 (472)
351 PLN02482 glutamate-1-semialdeh 99.0 3.8E-08 8.3E-13 105.4 23.2 214 208-426 137-386 (474)
352 PRK06938 diaminobutyrate--2-ox 99.0 7.4E-08 1.6E-12 103.0 24.7 226 206-438 102-384 (464)
353 PRK06916 adenosylmethionine--8 99.0 4.4E-08 9.5E-13 104.6 22.9 228 207-437 96-384 (460)
354 PRK06917 hypothetical protein; 99.0 1.4E-07 3E-12 100.5 25.3 229 206-437 70-358 (447)
355 PRK07030 adenosylmethionine--8 99.0 1.4E-07 3.1E-12 100.9 25.5 229 206-437 86-375 (466)
356 COG0161 BioA Adenosylmethionin 99.0 7.6E-08 1.6E-12 101.1 22.8 231 204-438 82-375 (449)
357 COG0160 GabT 4-aminobutyrate a 99.0 9.8E-08 2.1E-12 100.6 23.5 223 210-438 99-375 (447)
358 PRK07483 hypothetical protein; 99.0 1.3E-07 2.9E-12 100.5 24.5 229 207-438 70-359 (443)
359 TIGR03811 tyr_de_CO2_Ent tyros 99.0 2.7E-07 5.9E-12 101.2 27.1 220 202-427 115-475 (608)
360 PRK06931 diaminobutyrate--2-ox 98.9 3E-07 6.6E-12 98.2 25.4 225 207-438 98-378 (459)
361 PLN02974 adenosylmethionine-8- 98.9 1.8E-07 3.9E-12 105.8 24.5 230 206-438 405-750 (817)
362 KOG1358 Serine palmitoyltransf 98.9 6.7E-09 1.4E-13 105.4 10.9 209 211-427 140-375 (467)
363 PRK06209 glutamate-1-semialdeh 98.9 9.9E-08 2.1E-12 101.1 19.3 218 211-433 89-339 (431)
364 PRK12566 glycine dehydrogenase 98.9 8.9E-08 1.9E-12 108.3 19.6 212 212-436 126-383 (954)
365 PRK06148 hypothetical protein; 98.8 5.9E-07 1.3E-11 104.5 25.2 227 205-437 658-939 (1013)
366 COG1003 GcvP Glycine cleavage 98.8 8.6E-08 1.9E-12 98.8 16.0 212 210-427 109-364 (496)
367 TIGR03251 LAT_fam L-lysine 6-t 98.8 3.3E-07 7.1E-12 97.2 21.1 162 206-374 81-299 (431)
368 PLN02452 phosphoserine transam 98.8 1.3E-07 2.9E-12 98.0 17.5 205 210-430 52-288 (365)
369 KOG0258 Alanine aminotransfera 98.8 3.2E-07 7E-12 93.4 17.6 222 202-432 109-387 (475)
370 KOG1402 Ornithine aminotransfe 98.7 6.1E-07 1.3E-11 89.7 18.0 213 209-428 100-348 (427)
371 KOG1404 Alanine-glyoxylate ami 98.7 6.7E-07 1.5E-11 91.2 18.5 229 204-438 86-367 (442)
372 KOG1401 Acetylornithine aminot 98.7 1.5E-06 3.1E-11 89.3 20.1 224 202-429 90-354 (433)
373 PRK08297 L-lysine aminotransfe 98.7 1.6E-06 3.4E-11 92.3 21.1 223 207-437 89-380 (443)
374 KOG2467 Glycine/serine hydroxy 98.7 6.1E-07 1.3E-11 90.7 16.0 222 200-428 70-341 (477)
375 COG1448 TyrB Aspartate/tyrosin 98.7 4.2E-06 9E-11 85.5 22.2 236 185-426 46-331 (396)
376 TIGR00699 GABAtrns_euk 4-amino 98.7 1.4E-06 2.9E-11 93.2 19.1 153 207-361 98-326 (464)
377 PRK12462 phosphoserine aminotr 98.7 1.7E-06 3.7E-11 89.6 19.1 204 210-429 49-286 (364)
378 PF12897 Aminotran_MocR: Alani 98.6 6.4E-06 1.4E-10 84.5 21.5 198 210-415 69-314 (425)
379 PF05889 SLA_LP_auto_ag: Solub 98.3 9.9E-06 2.1E-10 83.7 14.3 153 226-384 75-249 (389)
380 KOG0628 Aromatic-L-amino-acid/ 98.3 4E-05 8.6E-10 79.9 17.4 240 191-435 90-401 (511)
381 KOG1383 Glutamate decarboxylas 98.2 3.6E-05 7.9E-10 80.3 14.3 239 210-456 116-408 (491)
382 KOG0629 Glutamate decarboxylas 98.1 4.9E-05 1.1E-09 78.6 14.4 206 218-429 149-415 (510)
383 PF04864 Alliinase_C: Allinase 98.0 6.5E-05 1.4E-09 76.2 11.5 173 210-394 43-231 (363)
384 KOG2040 Glycine dehydrogenase 97.9 0.0002 4.3E-09 77.3 13.3 250 211-465 583-891 (1001)
385 KOG2040 Glycine dehydrogenase 97.7 0.00015 3.3E-09 78.2 8.9 137 216-358 169-309 (1001)
386 KOG3846 L-kynurenine hydrolase 97.7 0.00014 3.1E-09 72.4 8.0 161 214-374 115-293 (465)
387 KOG1412 Aspartate aminotransfe 97.6 0.0046 1E-07 62.0 17.2 148 228-379 102-277 (410)
388 KOG1403 Predicted alanine-glyo 97.1 0.0022 4.7E-08 64.0 9.1 207 210-425 87-345 (452)
389 COG3033 TnaA Tryptophanase [Am 97.0 0.011 2.5E-07 60.4 13.1 226 189-427 63-346 (471)
390 KOG1411 Aspartate aminotransfe 97.0 0.032 6.9E-07 56.9 16.1 240 182-427 69-359 (427)
391 PLN02994 1-aminocyclopropane-1 96.5 0.0077 1.7E-07 55.1 6.9 54 208-261 94-153 (153)
392 COG1932 SerC Phosphoserine ami 95.8 0.21 4.5E-06 51.4 14.0 206 210-430 50-289 (365)
393 KOG3843 Predicted serine hydro 95.0 0.11 2.3E-06 51.5 8.2 99 284-385 142-252 (432)
394 KOG1405 4-aminobutyrate aminot 90.8 1.2 2.6E-05 45.9 8.7 74 285-360 255-345 (484)
395 PF02310 B12-binding: B12 bind 87.3 1.6 3.4E-05 37.3 5.9 89 263-353 17-110 (121)
396 cd02067 B12-binding B12 bindin 82.3 8.4 0.00018 32.9 8.2 91 263-355 16-110 (119)
397 PRK13396 3-deoxy-7-phosphohept 80.0 21 0.00045 37.2 11.4 43 297-339 237-284 (352)
398 PF05368 NmrA: NmrA-like famil 80.0 6.2 0.00014 37.6 7.3 92 233-331 7-99 (233)
399 TIGR01305 GMP_reduct_1 guanosi 76.8 72 0.0016 33.1 14.0 178 173-354 44-241 (343)
400 cd02068 radical_SAM_B12_BD B12 71.4 18 0.00039 31.3 7.3 83 267-352 9-95 (127)
401 TIGR02026 BchE magnesium-proto 70.5 17 0.00038 39.4 8.4 85 266-353 28-121 (497)
402 PF01596 Methyltransf_3: O-met 68.5 18 0.00039 34.6 7.1 125 208-338 29-160 (205)
403 PRK05096 guanosine 5'-monophos 68.0 1.5E+02 0.0033 30.8 13.9 124 228-352 98-240 (346)
404 COG1606 ATP-utilizing enzymes 67.9 21 0.00045 35.5 7.4 114 212-337 4-124 (269)
405 PLN02476 O-methyltransferase 64.8 43 0.00094 33.7 9.3 124 208-337 102-232 (278)
406 PRK13397 3-deoxy-7-phosphohept 63.8 92 0.002 30.9 11.2 43 297-339 151-197 (250)
407 PRK12595 bifunctional 3-deoxy- 62.4 74 0.0016 33.2 10.8 89 273-361 224-331 (360)
408 cd01078 NAD_bind_H4MPT_DH NADP 61.7 1E+02 0.0022 28.5 10.9 105 226-339 29-134 (194)
409 cd04736 MDH_FMN Mandelate dehy 61.6 37 0.0008 35.5 8.4 84 266-353 228-317 (361)
410 PLN02589 caffeoyl-CoA O-methyl 61.3 86 0.0019 30.9 10.6 124 209-338 64-195 (247)
411 COG0552 FtsY Signal recognitio 59.7 52 0.0011 34.0 8.8 131 236-372 154-305 (340)
412 cd02071 MM_CoA_mut_B12_BD meth 56.7 52 0.0011 28.4 7.4 93 263-357 16-112 (122)
413 CHL00200 trpA tryptophan synth 55.6 84 0.0018 31.3 9.5 89 242-332 112-208 (263)
414 PF13460 NAD_binding_10: NADH( 54.1 77 0.0017 28.5 8.5 84 233-327 7-90 (183)
415 PRK08091 ribulose-phosphate 3- 53.7 1.5E+02 0.0033 28.9 10.7 70 281-353 127-206 (228)
416 cd00532 MGS-like MGS-like doma 53.3 67 0.0015 27.3 7.4 84 241-333 17-106 (112)
417 cd00381 IMPDH IMPDH: The catal 53.1 2.7E+02 0.0059 28.5 15.0 175 173-353 33-225 (325)
418 TIGR00640 acid_CoA_mut_C methy 52.4 76 0.0016 28.1 7.8 73 257-331 13-89 (132)
419 PLN02781 Probable caffeoyl-CoA 51.7 2.3E+02 0.005 27.4 12.7 126 208-337 52-182 (234)
420 TIGR03573 WbuX N-acetyl sugar 51.7 91 0.002 32.2 9.4 116 212-334 42-168 (343)
421 PF00478 IMPDH: IMP dehydrogen 48.2 69 0.0015 33.4 7.7 110 243-353 114-239 (352)
422 cd04726 KGPDC_HPS 3-Keto-L-gul 47.6 1.7E+02 0.0036 27.1 9.8 108 243-352 71-184 (202)
423 cd05013 SIS_RpiR RpiR-like pro 47.2 1.7E+02 0.0036 24.6 9.1 22 309-330 70-91 (139)
424 PRK05567 inosine 5'-monophosph 46.8 78 0.0017 34.3 8.3 111 241-352 232-358 (486)
425 PLN02274 inosine-5'-monophosph 45.9 1.3E+02 0.0027 33.0 9.7 110 242-352 253-378 (505)
426 COG1648 CysG Siroheme synthase 44.6 2.9E+02 0.0064 26.5 15.9 93 226-334 13-106 (210)
427 COG0296 GlgB 1,4-alpha-glucan 44.3 21 0.00045 40.0 3.4 34 304-337 205-238 (628)
428 PRK13937 phosphoheptose isomer 43.8 2.6E+02 0.0055 26.0 10.4 41 309-353 116-156 (188)
429 PF14258 DUF4350: Domain of un 43.5 1E+02 0.0022 23.6 6.5 60 267-332 11-70 (70)
430 PRK08745 ribulose-phosphate 3- 43.1 2.4E+02 0.0053 27.3 10.3 81 270-353 106-198 (223)
431 PF03435 Saccharop_dh: Sacchar 42.3 1.5E+02 0.0032 30.7 9.4 93 229-332 2-96 (386)
432 COG2185 Sbm Methylmalonyl-CoA 41.9 1.2E+02 0.0027 27.4 7.4 74 251-327 14-92 (143)
433 PRK08883 ribulose-phosphate 3- 41.8 2.1E+02 0.0045 27.7 9.6 80 270-352 102-193 (220)
434 PTZ00314 inosine-5'-monophosph 41.1 1.3E+02 0.0029 32.7 9.0 112 240-352 244-371 (495)
435 cd04795 SIS SIS domain. SIS (S 41.1 1.3E+02 0.0027 23.4 6.8 22 309-330 57-78 (87)
436 KOG1371 UDP-glucose 4-epimeras 41.0 65 0.0014 33.3 6.1 105 228-332 4-125 (343)
437 cd02065 B12-binding_like B12 b 41.0 1.8E+02 0.004 24.3 8.3 85 264-353 17-104 (125)
438 PRK12724 flagellar biosynthesi 40.7 1.3E+02 0.0028 32.3 8.5 90 246-337 249-346 (432)
439 COG1748 LYS9 Saccharopine dehy 40.7 2.1E+02 0.0046 30.3 10.1 109 226-339 2-129 (389)
440 smart00642 Aamy Alpha-amylase 40.7 27 0.00059 32.1 3.1 29 308-336 65-93 (166)
441 COG1087 GalE UDP-glucose 4-epi 40.4 76 0.0016 32.5 6.4 100 228-331 2-114 (329)
442 PRK14057 epimerase; Provisiona 40.3 3E+02 0.0066 27.3 10.6 71 280-353 140-220 (254)
443 PRK13307 bifunctional formalde 39.2 3.1E+02 0.0067 29.1 11.0 109 242-352 243-356 (391)
444 PRK00414 gmhA phosphoheptose i 38.9 2E+02 0.0043 27.0 8.8 44 308-355 120-163 (192)
445 PRK11889 flhF flagellar biosyn 38.8 2.9E+02 0.0063 29.6 10.7 91 244-336 264-363 (436)
446 PRK08673 3-deoxy-7-phosphohept 38.2 3.4E+02 0.0074 28.1 11.0 53 297-349 229-292 (335)
447 PRK06843 inosine 5-monophospha 38.0 1.5E+02 0.0033 31.4 8.6 111 241-352 157-283 (404)
448 cd01121 Sms Sms (bacterial rad 38.0 2E+02 0.0043 30.2 9.4 53 279-331 141-205 (372)
449 PLN02672 methionine S-methyltr 37.5 1.2E+02 0.0026 36.4 8.4 124 204-334 419-565 (1082)
450 PF10087 DUF2325: Uncharacteri 37.3 98 0.0021 25.5 5.8 62 265-333 14-82 (97)
451 PRK05234 mgsA methylglyoxal sy 37.2 91 0.002 28.1 5.9 48 286-334 65-114 (142)
452 TIGR01182 eda Entner-Doudoroff 37.0 2.8E+02 0.006 26.6 9.5 101 240-351 24-125 (204)
453 TIGR00262 trpA tryptophan synt 36.9 2.9E+02 0.0063 27.3 10.0 91 241-333 107-205 (256)
454 cd02070 corrinoid_protein_B12- 36.7 3.1E+02 0.0067 25.7 9.8 103 249-355 82-192 (201)
455 COG1091 RfbD dTDP-4-dehydrorha 36.4 1.5E+02 0.0032 30.0 7.8 52 280-331 34-97 (281)
456 PF15608 PELOTA_1: PELOTA RNA 36.1 1.3E+02 0.0027 25.7 6.1 66 263-334 22-88 (100)
457 PRK11337 DNA-binding transcrip 35.7 3.2E+02 0.007 27.0 10.3 43 309-355 197-239 (292)
458 PRK07807 inosine 5-monophospha 35.4 2.2E+02 0.0047 31.0 9.5 113 239-352 229-357 (479)
459 PRK02705 murD UDP-N-acetylmura 35.1 2.3E+02 0.0051 29.9 9.7 97 228-333 3-99 (459)
460 COG1954 GlpP Glycerol-3-phosph 35.0 56 0.0012 30.6 4.2 45 284-334 12-58 (181)
461 PRK10886 DnaA initiator-associ 35.0 3.1E+02 0.0068 25.9 9.5 41 286-331 101-141 (196)
462 PF04309 G3P_antiterm: Glycero 34.4 23 0.00049 33.2 1.6 83 284-383 8-90 (175)
463 PF00128 Alpha-amylase: Alpha 34.1 30 0.00064 33.7 2.5 31 305-335 44-74 (316)
464 PRK02261 methylaspartate mutas 33.3 1.6E+02 0.0034 26.3 6.7 61 263-325 20-81 (137)
465 TIGR03649 ergot_EASG ergot alk 33.1 2.2E+02 0.0047 27.7 8.5 77 242-327 16-97 (285)
466 COG1066 Sms Predicted ATP-depe 33.1 3.7E+02 0.0081 28.9 10.3 84 245-331 117-215 (456)
467 PRK13398 3-deoxy-7-phosphohept 32.6 4E+02 0.0086 26.6 10.1 42 297-338 163-208 (266)
468 PF08423 Rad51: Rad51; InterP 32.2 1.3E+02 0.0029 29.5 6.7 40 294-333 131-185 (256)
469 cd03332 LMO_FMN L-Lactate 2-mo 32.1 2E+02 0.0044 30.3 8.3 84 266-353 245-336 (383)
470 PF07279 DUF1442: Protein of u 31.9 4.6E+02 0.0099 25.5 9.9 120 208-336 25-152 (218)
471 PF01408 GFO_IDH_MocA: Oxidore 31.8 89 0.0019 26.1 4.8 10 297-306 63-72 (120)
472 TIGR01303 IMP_DH_rel_1 IMP deh 31.7 2.6E+02 0.0057 30.3 9.4 113 239-352 227-355 (475)
473 PF01408 GFO_IDH_MocA: Oxidore 31.7 2.9E+02 0.0063 22.8 8.0 44 285-332 76-119 (120)
474 PRK10416 signal recognition pa 31.4 5.8E+02 0.013 26.0 13.5 90 246-336 139-245 (318)
475 TIGR00649 MG423 conserved hypo 31.4 3E+02 0.0064 29.1 9.6 76 247-327 317-401 (422)
476 COG0514 RecQ Superfamily II DN 31.0 1.9E+02 0.004 32.4 8.1 123 204-336 15-142 (590)
477 cd02072 Glm_B12_BD B12 binding 30.5 1.6E+02 0.0035 26.1 6.2 63 263-327 16-79 (128)
478 TIGR01302 IMP_dehydrog inosine 30.3 2.1E+02 0.0046 30.6 8.4 108 244-352 231-354 (450)
479 TIGR00511 ribulose_e2b2 ribose 30.2 5.4E+02 0.012 26.0 10.9 105 221-332 111-223 (301)
480 PRK09722 allulose-6-phosphate 30.0 4.8E+02 0.01 25.4 10.0 81 270-353 104-196 (229)
481 PRK04296 thymidine kinase; Pro 30.0 1.9E+02 0.004 27.0 7.0 90 242-334 23-114 (190)
482 PRK09441 cytoplasmic alpha-amy 29.9 47 0.001 35.8 3.3 30 306-335 74-103 (479)
483 COG0367 AsnB Asparagine syntha 29.8 2.3E+02 0.005 31.3 8.7 108 225-338 231-349 (542)
484 cd00150 PlantTI Plant trypsin 29.7 24 0.00052 22.6 0.6 15 8-30 1-15 (27)
485 cd07018 S49_SppA_67K_type Sign 29.7 2.2E+02 0.0048 27.2 7.6 81 286-375 36-121 (222)
486 PRK13125 trpA tryptophan synth 29.5 4.7E+02 0.01 25.4 10.0 109 242-352 94-212 (244)
487 TIGR01501 MthylAspMutase methy 29.2 1.7E+02 0.0037 26.1 6.2 68 258-327 13-81 (134)
488 COG1058 CinA Predicted nucleot 29.1 1.2E+02 0.0025 30.3 5.6 84 246-334 7-95 (255)
489 PRK14974 cell division protein 28.8 5.6E+02 0.012 26.4 10.8 99 237-336 156-265 (336)
490 TIGR02238 recomb_DMC1 meiotic 28.6 4E+02 0.0087 27.1 9.7 43 291-333 186-243 (313)
491 PLN00191 enolase 28.6 3.4E+02 0.0073 29.4 9.4 98 233-333 296-395 (457)
492 TIGR01470 cysG_Nterm siroheme 28.5 5.1E+02 0.011 24.5 10.8 93 226-334 10-103 (205)
493 PLN03187 meiotic recombination 28.4 3.5E+02 0.0077 28.0 9.3 43 291-333 216-273 (344)
494 cd01422 MGS Methylglyoxal synt 28.4 2E+02 0.0043 24.7 6.3 45 286-331 60-106 (115)
495 PRK12723 flagellar biosynthesi 28.3 2.4E+02 0.0052 29.8 8.2 86 249-336 206-298 (388)
496 TIGR03127 RuMP_HxlB 6-phospho 28.2 4.1E+02 0.0089 24.1 8.9 41 309-353 82-122 (179)
497 PRK06731 flhF flagellar biosyn 27.8 5.1E+02 0.011 25.9 10.0 74 261-336 117-197 (270)
498 KOG4589 Cell division protein 27.5 4.1E+02 0.0089 25.6 8.5 43 282-324 119-165 (232)
499 TIGR02402 trehalose_TreZ malto 27.4 52 0.0011 36.2 3.2 33 304-336 151-183 (542)
500 cd05008 SIS_GlmS_GlmD_1 SIS (S 27.2 1.2E+02 0.0025 25.7 4.7 39 309-353 56-96 (126)
No 1
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-67 Score=541.76 Aligned_cols=311 Identities=42% Similarity=0.710 Sum_probs=291.3
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
++.|+++|.|+..+ ..++++++|||++|||.|++.++..+.+.+...+|.|+|.+||++..||++++.++|++.++.+
T Consensus 7 ~~~T~~v~~g~~~~--~~~gav~~PI~~tStf~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~~~af 84 (396)
T COG0626 7 SLTTRLVHAGRRPD--DLTGAVNPPIYLTSTFVFDSAGEGLDAFAGEEGGYDYSRTGNPTRDALEEALAELEGGEDAFAF 84 (396)
T ss_pred ccceeeEEcccccc--cCCCcccCCeeeeeeecccChhhhhhhccccccCcccccCCCccHHHHHHHHHHhhCCCcEEEe
Confidence 58899999997653 4689999999999999999998877777677788999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+|||+||.+++.+++++||+||+++..|++++.++..+++++|++++++|..+.+++++++.+.+|++||+|+|+||+.+
T Consensus 85 sSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~ 164 (396)
T COG0626 85 SSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLE 164 (396)
T ss_pred cCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999988888888887434999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHH-HhCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHH-VLGG 389 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~-~~G~ 389 (466)
+.||++|+++||++|+++||||||++|++++|+++|+|||++|+|||++||+|+++|+++++. ++.+.+....+ .+|.
T Consensus 165 v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~ 244 (396)
T COG0626 165 VPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGA 244 (396)
T ss_pred cccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999888765 45556555555 5999
Q ss_pred CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
.++|++||+++||++||..||+++++||+++++||++||.|++|+||||++||+|++++|||+|+||||||+|++
T Consensus 245 ~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 245 VLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999986
No 2
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=3.4e-65 Score=528.07 Aligned_cols=308 Identities=44% Similarity=0.779 Sum_probs=277.8
Q ss_pred cccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeCC
Q 012321 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (466)
Q Consensus 154 ~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~S 233 (466)
+|++||+|+..+. ..+++++||||+|+||.|++.+++ +.+.+...+|.|+|++||++..||++|++++|++.+++++|
T Consensus 1 ~T~~vh~g~~~~~-~~~~~v~~pi~~sstf~~~~~~~~-~~~~~~~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~S 78 (386)
T PF01053_consen 1 ETLLVHAGRDPDE-DQTGAVNPPIYQSSTFVFDSAEEL-DAFAGEEKGYIYSRYGNPTVRALEQRLAALEGGEDALLFSS 78 (386)
T ss_dssp HHHHHHTTTTGGT-STTTBSS--B---SBBBBSSHHHH-HHHTTSSSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEESS
T ss_pred CcceEeCCCCCCC-CCCCCeeCCccccccCcccchHHH-HhhcCCCCCcceeccccccHHHHHHHHHHhhcccceeeccc
Confidence 4889999987632 357899999999999999999998 77888888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc
Q 012321 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (466)
Q Consensus 234 G~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~ 313 (466)
||+||.+++.+++++||+|++.+..|++++.+++..++.+|+++.++|..|+++|+++++++ |++||+|+|+||++.+.
T Consensus 79 GmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~~-t~~v~~EspsNP~l~v~ 157 (386)
T PF01053_consen 79 GMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRPN-TKLVFLESPSNPTLEVP 157 (386)
T ss_dssp HHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCTT-EEEEEEESSBTTTTB--
T ss_pred hHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhcccc-ceEEEEEcCCCcccccc
Confidence 99999999999999999999999999999999998899999999999999999999999984 99999999999999999
Q ss_pred cHHHHHHHHHhcC-CEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeCh--HHHHHHHHHHHHhCCC
Q 012321 314 DVKLVSDLCHKKG-AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHVLGGA 390 (466)
Q Consensus 314 dl~~I~ela~~~g-illIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~--eli~~l~~~~~~~G~~ 390 (466)
|+++|+++||++| ++++||+||++|++++|+.+|+|++++|+|||++||+|+++|+++.++ +++++++..+..+|..
T Consensus 158 Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~ 237 (386)
T PF01053_consen 158 DLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGAT 237 (386)
T ss_dssp -HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B
T ss_pred cHHHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCcc
Confidence 9999999999999 999999999999999999999999999999999999999999999764 7889999999999999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++|++||+++|+++|+..||+++++|+++|+++|++||.|++|+||+|++||+|+++++||.|+||||||+|++
T Consensus 238 ~~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~ 311 (386)
T PF01053_consen 238 LSPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG 311 (386)
T ss_dssp --HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS
T ss_pred chHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986
No 3
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.9e-65 Score=503.47 Aligned_cols=309 Identities=38% Similarity=0.626 Sum_probs=290.9
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+|+|+++|+|+. + ..+++..+|||+|++|.|++.+...+.|..+..+|.|+|..||+...||++|+.++|+-.++.+
T Consensus 7 ~f~T~~vHag~~-d--~~t~ara~PIyqtTsy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~ 83 (426)
T COG2873 7 GFETLAVHAGQE-D--PTTGARAVPIYQTTSYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAV 83 (426)
T ss_pred CcchhhhcCCCC-C--CCCCceecceeeeeeeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhhhhh
Confidence 599999999987 2 4688999999999999999999999999998889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
.|||+|+..++..++++||+|+.....|++++.++...++++||+++++|..|++.++++|+++ ||+||+|+..||-+.
T Consensus 84 aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~n-Tkavf~EtigNP~~~ 162 (426)
T COG2873 84 ASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDEN-TKAVFAETIGNPGLD 162 (426)
T ss_pred ccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCcc-cceEEEEeccCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999985 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeCh--H--------------
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--K-------------- 375 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~--e-------------- 375 (466)
+.|+++|+++||++|+++|||||+++|++.+|+++|+|||+||+|||++|||..+||+|+-.. +
T Consensus 163 v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~ 242 (426)
T COG2873 163 VLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPD 242 (426)
T ss_pred ccCHHHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999997210 0
Q ss_pred -------HHH---------HHH-HHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCC
Q 012321 376 -------LVT---------QIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 376 -------li~---------~l~-~~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL 438 (466)
+.+ +.| ...+.+|.+++|+++|+++.|++||.+||+||++|+.++++||++||+|.+|+||||
T Consensus 243 p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL 322 (426)
T COG2873 243 PSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGL 322 (426)
T ss_pred ccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCC
Confidence 111 222 345678999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHhhc-CCcceEEEEEece
Q 012321 439 KSHPEHHIATQQM-TGFGGVVSFEVCV 464 (466)
Q Consensus 439 ~s~p~~~l~~~~~-~g~Ggl~sfel~~ 464 (466)
++||.|++++|++ +|+|+||||++||
T Consensus 323 ~~~~~h~la~kyl~~g~g~vltF~~kg 349 (426)
T COG2873 323 ASHPYHALAKKYLPKGAGAVLTFGVKG 349 (426)
T ss_pred CCCcchhHHHhhccCCCceEEEEEecC
Confidence 9999999999999 8999999999987
No 4
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1e-63 Score=518.10 Aligned_cols=310 Identities=27% Similarity=0.457 Sum_probs=291.0
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhccc-CCCccCCCCchhHHHHHHHHHhhhCCCcEEE
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~-~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~ 230 (466)
+++|+++|.|... ...+++++||||+++||.|++.+++.+.+.++. .+|.|+|.+||+++.||++|++++|++.+++
T Consensus 5 ~~~t~~~~~~~~~--~~~~~~v~~pi~~sstf~f~~~~~~~~~~~~~~~~~~~YsR~~nPt~~~le~~la~LEg~~~a~~ 82 (395)
T PRK08114 5 KLDTQLVNAGRSK--KYTQGSVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQEAMCELEGGAGCAL 82 (395)
T ss_pred CcchheEeCCCCC--CCCCCCccCCeeCCCceecCCHHHHHHhhccCcCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Confidence 4779999999532 223479999999999999999998887775543 4699999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCc
Q 012321 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG 310 (466)
++|||+||.+++.+++++||+||+++..|++++.++...++++|+++++++..|.++++++++++ ||+|++|+|+||+|
T Consensus 83 ~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~~~l~~~-TrlV~~EtpsNp~~ 161 (395)
T PRK08114 83 YPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIAKLIQPN-TKVVFLESPGSITM 161 (395)
T ss_pred EhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCC
Confidence 99999999999999999999999999999999999988889999999999999999999999875 99999999999999
Q ss_pred ccccHHHHHHHHHhcC--CEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhC
Q 012321 311 RCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG 388 (466)
Q Consensus 311 ~v~dl~~I~ela~~~g--illIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G 388 (466)
.+.|+++|+++||++| ++++||+|+++++.++|+++|+|++++|+|||++||+|+++|+++.++++.++++..+..+|
T Consensus 162 ~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G 241 (395)
T PRK08114 162 EVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMG 241 (395)
T ss_pred EeecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhcc
Confidence 9999999999999984 99999999999999999999999999999999999999999999988888888888888899
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 389 ~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
..++|+++|+++|||+||..||+++++|+..++++|++||.|++|+||||++||+|+++++||+|+||||||++++
T Consensus 242 ~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK08114 242 QMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK 317 (395)
T ss_pred CCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986
No 5
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.3e-61 Score=502.71 Aligned_cols=306 Identities=32% Similarity=0.578 Sum_probs=286.4
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.. ...+|.|+|.+||+++.||++|+.+++++.++++
T Consensus 12 ~~~t~~~~~~~~~~--~~~~~~~~Pi~~sst~~~~~~~~~~~----~~~~y~YsR~gnPt~~~Le~~la~le~~~~~v~~ 85 (395)
T PRK05967 12 GINTRLAHDGNDPG--DYHGFVNPPVVHASTVLFPDAETMAT----RGQKYTYGTRGTPTTDALCKAIDALEGSAGTILV 85 (395)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCChHHhhc----ccCCCccCCCCChHHHHHHHHHHHHhCCCCEEEE
Confidence 36799999996532 34689999999999999999887643 2347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+|||+|+.+++.+++++||+||++++.|++++.++...++.+|+++++++..+.++++++++++ ||+|++|+|+||++.
T Consensus 86 sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~~-TklV~lesPsNP~l~ 164 (395)
T PRK05967 86 PSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRPN-TKVVHTEAPGSNTFE 164 (395)
T ss_pred CcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCcC-ceEEEEECCCCCCCc
Confidence 9999999999999999999999999999999888877888999999999887788899999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l 391 (466)
+.|+++|+++||++|+++|+|++|++++.++|+++|+|++++|+|||++||+|+++|++++++++.++++.....+|..+
T Consensus 165 v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~ 244 (395)
T PRK05967 165 MQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCA 244 (395)
T ss_pred HHHHHHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988888888887888899999
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+|++||+++||++||..||+++++|+..|+++|++||+|++|+||||++||+|+++++||+|+||||||+|++
T Consensus 245 ~p~da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK05967 245 GPDDTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAA 317 (395)
T ss_pred CHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999984
No 6
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.8e-61 Score=500.57 Aligned_cols=309 Identities=30% Similarity=0.554 Sum_probs=287.2
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhccc-CCCccCCCCchhHHHHHHHHHhhhCCCcEEE
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~-~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~ 230 (466)
+++|+++|.|... ...+++++||||+|+||.|++.+++.+.+.+.. .+|.|+|.++|+...||++|+++++++++++
T Consensus 4 ~~~t~~~~~~~~~--~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~ 81 (394)
T PRK09028 4 KKATKIVSAGRDK--KWTKGVINPPVFRASTVVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGGAGTAL 81 (394)
T ss_pred CccceeEEcCCCC--CCCCCCccCCeeCCCCcccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 3779999999433 223478999999999999999988776654432 4589999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCc
Q 012321 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG 310 (466)
++|||+|+.+++.+++++||+||++++.|+++..++...++.+|+++.+++..+.++++++++++ ||+|++|+|+||+|
T Consensus 82 ~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~~-TklV~lespsNPtg 160 (394)
T PRK09028 82 YPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRPN-TKVLFLESPGSITM 160 (394)
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCC
Confidence 99999999999999999999999999999999888877778899999999887888999999874 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCC
Q 012321 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 311 ~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ 390 (466)
.+.|+++|+++||++|+++++|++|++++.++|+++|+|++++|+|||++||+|+++|+++.++++.++++..+..+|.+
T Consensus 161 ~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~ 240 (394)
T PRK09028 161 EVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQC 240 (394)
T ss_pred cHHHHHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988888888888888889999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEec
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVC 463 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~ 463 (466)
++|+++|+++|||+||..||+++++|+..++++|++||.|++|+||||++||+|+++++||+|+||||||+++
T Consensus 241 ~~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 241 TSPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred CCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998
No 7
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.1e-59 Score=488.33 Aligned_cols=302 Identities=31% Similarity=0.534 Sum_probs=280.3
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|.|..++ ..+++++||||+|+||.|++.. ...+|.|+|++||+++.||++||+++|.+.++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~--------~~~~~~Y~R~~npt~~~Le~~lA~leg~e~ivvt 74 (388)
T PRK08861 5 KPATIAVRTGIESD--SQYHAVVPPIYLSTNYGFPAFG--------EVPKYDYTRSGNPNRGLLEQTLSELESGKGAVVT 74 (388)
T ss_pred CcccceeECCCCCC--CCCCCccCCcccCcceEeCCcC--------ccCCccccCCCCchHHHHHHHHHHHhCCCeEEEE
Confidence 47899999996543 2357999999999999999842 2347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
++|++|+.+++.+++++||+|+++++.|++++.++...+...|+++.+++..|+++++++++++ |++|++|+|+||||.
T Consensus 75 ~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~i~~~-tklV~lesP~NPtG~ 153 (388)
T PRK08861 75 NCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALDAALAKK-PKLILLETPSNPLVR 153 (388)
T ss_pred CCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999998877766666778999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++|+.++.++|+++|+|++++|+|||++||+|+++|+++++ +++.++++.++..+|..
T Consensus 154 v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~ 233 (388)
T PRK08861 154 VVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGAT 233 (388)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999988999999999999999999999999999999875 57778898888899999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++|+++|+++|||+||..||+++++|+.+|+++|++||.|++|+||||++||+|+++++||+|+||||||+|++
T Consensus 234 ~~p~~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~ 307 (388)
T PRK08861 234 GTPFDSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG 307 (388)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985
No 8
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=4.5e-59 Score=488.46 Aligned_cols=308 Identities=29% Similarity=0.516 Sum_probs=281.9
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|... .. +++++||||+++||.|++.+++...++....+|.|+|.++|++++||+.+++++|++.+++++
T Consensus 7 ~~t~~~~~g~~~--~~-~~~~~~PI~~sst~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg~~~av~~~ 83 (432)
T PRK06702 7 KGTICVQGGYTP--KN-GEPRVLPLYQSTTYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEGGVGAVATA 83 (432)
T ss_pred cchHheeCCCCC--CC-CCCccCCccCCcceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhCCCcEEEEC
Confidence 689999999643 22 579999999999999999988877766555689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
|||+||.+++.+++++||+||++.++|+++..++...+..+|++++++|. .|+++++++|+++ ||+|++|+|+||++.
T Consensus 84 SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~~-Tk~I~~e~pgnP~~~ 162 (432)
T PRK06702 84 SGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALANDK-TKLVYAESLGNPAMN 162 (432)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCcC-CeEEEEEcCCCcccc
Confidence 99999999999999999999999999999999887777889999999997 5899999999985 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeCh----------HH-----
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG----------KL----- 376 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~----------el----- 376 (466)
+.|+++|+++||++|+++|+|+||++|+.++|+++|+||+++|+|||++||+|+++|+++... ++
T Consensus 163 v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~ 242 (432)
T PRK06702 163 VLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDP 242 (432)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999998422 11
Q ss_pred ----------------HHHHH-HHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCC
Q 012321 377 ----------------VTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 439 (466)
Q Consensus 377 ----------------i~~l~-~~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~ 439 (466)
+.+.+ .....+|..++|+++|+++++|+|++.||+++++|+.+|+++|++||.|++|+||+|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~ 322 (432)
T PRK06702 243 SYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLD 322 (432)
T ss_pred cccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 11122 3455778999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHhhc-CCcceEEEEEece
Q 012321 440 SHPEHHIATQQM-TGFGGVVSFEVCV 464 (466)
Q Consensus 440 s~p~~~l~~~~~-~g~Ggl~sfel~~ 464 (466)
+||+|+++++|| .|+||||||+|++
T Consensus 323 ~~p~~~l~~~~~~~g~gg~~sf~l~~ 348 (432)
T PRK06702 323 SNENYSLAQKYLKKGASGVLTFGIKG 348 (432)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecC
Confidence 999999999999 7899999999975
No 9
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-59 Score=475.68 Aligned_cols=313 Identities=41% Similarity=0.657 Sum_probs=287.9
Q ss_pred ccCCCccccccccCCcCCCCCCCCCccCCccccCCCccCCh-HHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCC
Q 012321 148 SFLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKT-AELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAE 226 (466)
Q Consensus 148 ~~~~~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~-~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e 226 (466)
++..+++|.++|+|+..+.. .+++++|||+.+++++|... .+.....+. .+|.|+|.+||++..||+.+++++|++
T Consensus 17 ~~~~~~~t~~~~~g~~~~~~-~~~~v~~pI~~~~s~tfk~~~~~~~~~~~~--~~~~Ysr~~nPt~~~le~~iaal~ga~ 93 (409)
T KOG0053|consen 17 SRLSHLDTNLLHAGQDPEKA-IHNAVAPPIYATLSTTFKQDLNEGEHGGNL--DGYDYSRSGNPTRDVLESGIAALEGAA 93 (409)
T ss_pred hhccccchhhhhcccccchh-ccccccCceecccceeecccCccccccccc--cccccccCCCCchHHHHHHHHHHhCCc
Confidence 33357999999999886543 47899999997777776664 222221111 259999999999999999999999999
Q ss_pred cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCC
Q 012321 227 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 227 ~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPs 306 (466)
.+++++|||+|+..+++.++++|++|++...+|++|+.++...++++|++..++|..|++++++++++ +|++||+|+|+
T Consensus 94 ~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~~i~~-~t~~V~~ESPs 172 (409)
T KOG0053|consen 94 HALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILKAIKE-NTKAVFLESPS 172 (409)
T ss_pred eEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHHhhcc-CceEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 49999999999
Q ss_pred CCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHH
Q 012321 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHH 385 (466)
Q Consensus 307 NPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~ 385 (466)
||++++.||++|+++||++|+++||||||+++++++|+.+|+|||++|+|||++||+|+++|+++.+ +++.++++..+.
T Consensus 173 NPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~ 252 (409)
T KOG0053|consen 173 NPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQE 252 (409)
T ss_pred CCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999997 899999999999
Q ss_pred HhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 386 VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 386 ~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
.+|.+++|+++|+..|+++|+..|++++.+|+..++++|+++|+|++|+||||++||+|+++++|++|.+|+++|.+++
T Consensus 253 ~lg~~~~p~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~ 331 (409)
T KOG0053|consen 253 DLGWCEDPFDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFG 331 (409)
T ss_pred HhcCCCCHHHHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998877767777765
No 10
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1e-57 Score=475.63 Aligned_cols=310 Identities=42% Similarity=0.701 Sum_probs=289.9
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|+|...+ ..+++++||||+++||.|++.+++.+.+.+...+|.|+|+++|+++.||++|++++|.+.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~ 85 (398)
T PRK08249 8 GVGTKAVWAGEKEY--LPYGATQVPVVLSVAYGYDDIDEWYDVALGKKPGHIYSRNTNPTVQAFEEKVRILEGAEAATAF 85 (398)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCHHHHHHhhcCCcCCccccCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 47799999996542 3367999999999999999998777777665567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+||++|+..++.+++++||+|+++.+.|+++..++...++..|+++.+++..|+++++++++++ |++|++|+|+||+|.
T Consensus 86 ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~~-tklV~ie~p~NPtg~ 164 (398)
T PRK08249 86 STGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAKG-CDLLYLETPTNPTLK 164 (398)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCCC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999998877777778889999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l 391 (466)
+.|+++|.++||++|+++|+|++|+.++...++.+++|++++|+||+++||++.++|+++++++++++++.++...|..+
T Consensus 165 v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~ 244 (398)
T PRK08249 165 IVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATM 244 (398)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998888888888999999999999999999999999999999999998888899999
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+++.+|+++++++++..|++++++|++.++++|++||.|++|+||||++||+|+++++||+|+||||||+|++
T Consensus 245 s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~ 317 (398)
T PRK08249 245 DPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG 317 (398)
T ss_pred CHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975
No 11
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=4.1e-57 Score=471.73 Aligned_cols=309 Identities=37% Similarity=0.583 Sum_probs=287.7
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|+|... ..+++++||||+++||.|++.+++.+.+.+...+|.|+|+++|+++.||++|++++|.++++++
T Consensus 15 ~~~t~~~~~~~~~---~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~al~~ 91 (403)
T PRK07810 15 SQATIGVRGGLLR---SGFEETAEALYLTSGYVYESAAAAEAAFTGELDRFVYSRYGNPTVSMFEERLRLIEGAEACFAT 91 (403)
T ss_pred CcchhheeCCCCC---CCCCCccCCccCCCccccCCHHHHHHHhccCcCCcceeCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 4689999999643 2357899999999999999998887776665567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+|||+|+..++.+++++||+||+++..|++++..+...++..|+++.+++..|+++++++++++ |++|++|+|+||+|.
T Consensus 92 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~-tklV~~esp~Nptg~ 170 (403)
T PRK07810 92 ASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWEEALSVP-TQAVFFETPSNPMQS 170 (403)
T ss_pred CChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCCe
Confidence 9999999999999999999999999999999888877788899999999999999999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHH-HHHHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~-~l~~~~~~~G~~ 390 (466)
+.|+++|+++||++|+++|+|++|+.++.++++.+|+|++++|+||+++||||++||+++++++.+. +++.+....|..
T Consensus 171 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~ 250 (403)
T PRK07810 171 LVDIAAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 250 (403)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998889999999999999999999999999999999887665 577777788999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++.+|+++++|+++..|++++++|+.+++++|++||.|.+|+||||++||+|++++|||+|+|||+||+|++
T Consensus 251 ~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 324 (403)
T PRK07810 251 LSAFNAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDA 324 (403)
T ss_pred CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985
No 12
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=6.7e-57 Score=466.32 Aligned_cols=303 Identities=29% Similarity=0.529 Sum_probs=279.3
Q ss_pred ccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCH
Q 012321 155 SLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASG 234 (466)
Q Consensus 155 t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG 234 (466)
|+++|.|...+ ..+++++||||+|+||.|++.++.. ....+|.|+|.+||++..||++|++++|++++++++||
T Consensus 1 t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~----~~~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG 74 (377)
T TIGR01324 1 TRLIHSGRQPR--FSQGSVNPPLQRASTVLFDSHAAQR----RAKGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPSG 74 (377)
T ss_pred CeeEECCCCCC--CCCCCccCCeeCCCceeeCChhhhc----CCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECcH
Confidence 56789885532 2358999999999999999864332 23457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc
Q 012321 235 MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 314 (466)
Q Consensus 235 ~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d 314 (466)
++|+..++.+++++||+||++++.|+++..++...++.+|+++.+++..+.++++++++++ ||+|++|+|+||+|.+.|
T Consensus 75 ~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~~-tklV~lesp~Np~g~~~d 153 (377)
T TIGR01324 75 LAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQPN-TKVLFLEAPSSITFEIQD 153 (377)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCCcHHH
Confidence 9999999999999999999999999998877766677789999988876668999999875 999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHH
Q 012321 315 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (466)
Q Consensus 315 l~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~ 394 (466)
+++|+++|+++|+++|+|++|+.+..++|+++|+|++++|++||++||+|+++|+++++++.+++++.....+|..++|+
T Consensus 154 l~~I~~la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~ 233 (377)
T TIGR01324 154 IPAIAKAARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDAD 233 (377)
T ss_pred HHHHHHHHHHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888887788899999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 395 AAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 395 ~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++|+++++++++..||+++++|+.+++++|++||.|++|+||+|++||+|+++++||+|+||||||+|++
T Consensus 234 ~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~ 303 (377)
T TIGR01324 234 DAYTTLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQR 303 (377)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 13
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.4e-56 Score=465.26 Aligned_cols=303 Identities=32% Similarity=0.548 Sum_probs=279.8
Q ss_pred CCccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEE
Q 012321 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~ 230 (466)
++++|+++|.|...+ ..+++++||||+++||.|++.++ ..+|.|+|++||+++.|+++||+++|.+++++
T Consensus 3 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~--------~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~ 72 (386)
T PRK08045 3 RKQATIAVRSGLNDD--EQYGCVVPPIHLSSTYNFTGFNE--------PRAHDYSRRGNPTRDVVQRALAELEGGAGAVL 72 (386)
T ss_pred CCcccceeEcCCCCC--CCCCCccCCccCCcceecCCccc--------cCCceeeCCCCccHHHHHHHHHHHhCCCeEEE
Confidence 457899999996542 23689999999999999988532 24699999999999999999999999989999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCc
Q 012321 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG 310 (466)
++||++|+..++.+++++||+|+++++.|++++..+.......++++.+++..|+++++++++++ +++|++|+|+||||
T Consensus 73 ~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~l~~~-tklV~l~sP~NPtG 151 (386)
T PRK08045 73 TNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEK-PKLVLVESPSNPLL 151 (386)
T ss_pred ECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHhcccC-CeEEEEECCCCCCC
Confidence 99999999999999999999999999999998887777666677888888888999999999874 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCC
Q 012321 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG 389 (466)
Q Consensus 311 ~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~ 389 (466)
.+.|+++|.++|+++|+++|+|++|..+..+.|+.+|+|++++|+|||++||+++++|++++ +++++++++..+..+|.
T Consensus 152 ~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~ 231 (386)
T PRK08045 152 RVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGV 231 (386)
T ss_pred EecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999998889999999999999999999999999999877 57888999888889999
Q ss_pred CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+++++++|+++++|+++..|++++++|+.+|+++|++||.|++|+||||++||+|+++++||+|+||||||+|++
T Consensus 232 ~~~p~~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~ 306 (386)
T PRK08045 232 TGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG 306 (386)
T ss_pred CCCHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999986
No 14
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.7e-56 Score=470.42 Aligned_cols=309 Identities=36% Similarity=0.605 Sum_probs=283.0
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.....+|.|+|.++|+.+.||+.|++++|.+.+++++
T Consensus 9 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~leg~~~al~~~ 86 (431)
T PRK08248 9 LETLAIHAGQEID--PTTGSRAVPIYQTTSYGFRDSEHAANLFSLKEFGNIYTRIMNPTTDVFEKRIAALEGGIGALAVS 86 (431)
T ss_pred cchhheeCCcCCC--CCCCCccCCeeCCCccccCCHHHHHhhhccccCCceeECCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999996532 33679999999999999999998888776666689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
||++|+..++.+++++||+|+++++.|++++..+...++..|+++.+++..|+++++++++++ +++|++++|+||||.+
T Consensus 87 sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai~~~-tklV~l~sp~NPtG~v 165 (431)
T PRK08248 87 SGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAITDK-TKALFAETIGNPKGDV 165 (431)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCCcc
Confidence 999999999999999999999999999999888877788899999999999999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHH----------------
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL---------------- 376 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~el---------------- 376 (466)
.|+++|+++||++|+++|+|++++.+..+.|+++|+|++++|+||+++|||+++||+++.+.+.
T Consensus 166 ~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~ 245 (431)
T PRK08248 166 LDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDP 245 (431)
T ss_pred cCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCcc
Confidence 9999999999999999999999998888899999999999999999999999999998864321
Q ss_pred -----------------HHHHHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCC
Q 012321 377 -----------------VTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 439 (466)
Q Consensus 377 -----------------i~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~ 439 (466)
...++.....+|..++|++||++++||+||+.|++++++|+.+|+++|++||.|++|+||||+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~ 325 (431)
T PRK08248 246 SYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLP 325 (431)
T ss_pred ccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 122334566789999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHhhc-CCcceEEEEEece
Q 012321 440 SHPEHHIATQQM-TGFGGVVSFEVCV 464 (466)
Q Consensus 440 s~p~~~l~~~~~-~g~Ggl~sfel~~ 464 (466)
+||+|+++++|| .|+||||||+|++
T Consensus 326 s~p~~~~~~~~~~~g~gg~~sf~l~~ 351 (431)
T PRK08248 326 SHPSYELAKKYLPKGQGAILTFGIKG 351 (431)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecC
Confidence 999999999999 7899999999975
No 15
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=2.7e-56 Score=463.97 Aligned_cols=309 Identities=37% Similarity=0.623 Sum_probs=286.6
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|...+ ..+++++||||+++||.|++.+++.+.+.+...+|.|+|+++|+++.||++||+++|.+.+++++
T Consensus 4 ~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~av~~~ 81 (391)
T TIGR01328 4 FATRAIHAGYPPK--DQFGALTPPIYQTSTFVFDSCEQGGNRFAGQESGYIYSRLGNPTVSNLEGRIAFLEGTEAAVATS 81 (391)
T ss_pred cccceeeCCccCC--CCCCCccCCcccCcceecCChHHHHHhhcCCcCCCceeCCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999996542 23589999999999999999988887776666689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
||++|+.+++.+++++||+|+++.+.|++++..+...+..+|+++.++|..|+++++++++++ |++|++|+|+||+|.+
T Consensus 82 sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~~~i~~~-tklV~le~p~Np~G~v 160 (391)
T TIGR01328 82 SGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVKAHIKDN-TKIVYFETPANPTMKL 160 (391)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhhccC-CeEEEEECCCCCCCcc
Confidence 999999999999999999999999999998888877788899999999999999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH--HHhCCC
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA 390 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~--~~~G~~ 390 (466)
.|+++|.++|+++|+++|+|++|+.++..+++..|+|++++|+||+++|++++++|+++++++++++++... ...|..
T Consensus 161 ~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~ 240 (391)
T TIGR01328 161 IDMERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSV 240 (391)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999988888888999999999999999999988999999999999888643 245778
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++.+|+++++++++..|++++++|+++++++|+++|.|++|+||||++||+|+++++||+|+||||||++++
T Consensus 241 l~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~ 314 (391)
T TIGR01328 241 ISPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKG 314 (391)
T ss_pred CCcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985
No 16
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=3.4e-56 Score=468.27 Aligned_cols=309 Identities=36% Similarity=0.574 Sum_probs=281.1
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.++....+|.|+|+++|+++.||++|++++|.+.+++++
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~av~~s 91 (436)
T PRK07812 14 FETKQIHAGQTPD--PATNARALPIYQTTSYTFDDTDHAAALFGLAEPGNIYTRIMNPTQDVVEQRIAALEGGVAALLLA 91 (436)
T ss_pred cchhheeCCCCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhcCCcCCccccCCCCchHHHHHHHHHHHhCCCeEEEEc
Confidence 6799999996432 23579999999999999999988887776666679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-CCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd-~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
|||+|+.+++.+++++||+||++...|++++.++...+++.|+++.+++ ..|+++++++++++ |++|++|+|+||+|.
T Consensus 92 SG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~l~~ai~~~-tklV~ie~~sNp~G~ 170 (436)
T PRK07812 92 SGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDAWRAAVRPN-TKAFFAETISNPQID 170 (436)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHHHHHhCCCC-CeEEEEECCCCCCCe
Confidence 9999999999999999999999999999998887777788899999985 66899999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChH----------------
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~e---------------- 375 (466)
+.|+++|.++||++|+++|+|+++++++.++++++|+|++++|+||+++|||++++|+++.+..
T Consensus 171 v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~ 250 (436)
T PRK07812 171 VLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDP 250 (436)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCc
Confidence 9999999999999999999999999999999999999999999999999999999999986321
Q ss_pred --------------HHHHHH-HHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCC
Q 012321 376 --------------LVTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKS 440 (466)
Q Consensus 376 --------------li~~l~-~~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s 440 (466)
++.+++ ..+...|..++|++||++++||+||..||+++++|+.+|+++|++||+|++|+||||++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s 330 (436)
T PRK07812 251 SYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPS 330 (436)
T ss_pred ccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 111222 45567899999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHhhc-CCcceEEEEEece
Q 012321 441 HPEHHIATQQM-TGFGGVVSFEVCV 464 (466)
Q Consensus 441 ~p~~~l~~~~~-~g~Ggl~sfel~~ 464 (466)
||+|+++++|| .|+||||||+|+|
T Consensus 331 ~p~~~~~~~~~~~g~gg~~sf~l~~ 355 (436)
T PRK07812 331 SPWYERAKRLAPKGTGAVLSFELAG 355 (436)
T ss_pred CccHHHHHHhCcCCCceEEEEEecC
Confidence 99999999999 8899999999975
No 17
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=6.9e-56 Score=466.11 Aligned_cols=309 Identities=32% Similarity=0.479 Sum_probs=279.3
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.....+|.|+|.++|+++.+|+.+++++|++.+++++
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~Pi~~sstf~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~le~~la~l~g~~~~v~fs 91 (437)
T PRK05613 14 FETRSIHAGQSVD--SDTSARNLPIYQTTSYVFDSAEHAKQRFALEDLGPIYSRLTNPTVEALENRIASLEGGVHAVAFA 91 (437)
T ss_pred cchHheeCCCCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCceeeCccChHHHHHHHHHHHHhCCCeEEEeC
Confidence 6799999996542 23579999999999999999988777665445679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-CCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd-~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
|||+|+.+++.+++++||+||+++..|+++...+...+++.|+++.++| ..|+++++++++++ |++|++++++||+|.
T Consensus 92 SG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~~-tk~V~~e~~~Np~~~ 170 (437)
T PRK05613 92 SGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQPN-TKAFFGETFANPQAD 170 (437)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCcc-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999997777677788999999997 56899999999885 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChH----------------
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~e---------------- 375 (466)
+.|+++|+++||++|+++|+|++++.+..++++++|+|++++|+||+++||++++||+++.+++
T Consensus 171 v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~ 250 (437)
T PRK05613 171 VLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYF 250 (437)
T ss_pred ccCHHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCC
Confidence 9999999999999999999999999988899999999999999999999999999999986422
Q ss_pred -------------------HH-HHHHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeC
Q 012321 376 -------------------LV-TQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 435 (466)
Q Consensus 376 -------------------li-~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~ 435 (466)
++ +....+...+|..++|++||+++|||+||..||+++++|+.+|+++|++||+|++|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~y 330 (437)
T PRK05613 251 VTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNF 330 (437)
T ss_pred CCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEEC
Confidence 01 1122456678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcchHHHHhhc-CCcceEEEEEece
Q 012321 436 PGLKSHPEHHIATQQM-TGFGGVVSFEVCV 464 (466)
Q Consensus 436 PgL~s~p~~~l~~~~~-~g~Ggl~sfel~~ 464 (466)
|||++||+|+++++|| .|+||||||+|++
T Consensus 331 Pgl~~~p~~~~~~~~~~~g~gg~~sf~l~~ 360 (437)
T PRK05613 331 AGLKDSPWYATKEKLGLKYTGSVLSFDIKG 360 (437)
T ss_pred CCCCCCccHHHHHHhcCCCCceEEEEEecC
Confidence 9999999999999997 7899999999975
No 18
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.2e-55 Score=463.41 Aligned_cols=309 Identities=35% Similarity=0.565 Sum_probs=279.7
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|.++|+.++||++|++++|.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~s 80 (425)
T PRK06084 3 LETLAIHAGYSPD--PTTKAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVA 80 (425)
T ss_pred cchhheeCCcCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCccccCCCCchHHHHHHHHHHHhCCCceeEeh
Confidence 5789999996432 23578999999999999999988888776555679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
|||+|+.+++.+++++||+|+++.+.|++++..+...++..|+++.+++..|+++++++++++ +++|++|+|+||+|.+
T Consensus 81 sG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~~-tklV~lesp~NPtG~v 159 (425)
T PRK06084 81 SGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDER-TKAVFCESIGNPAGNI 159 (425)
T ss_pred hHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhccC-CcEEEEeCCCCCCCee
Confidence 999999999999999999999999999998887777677789999999988999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHH----------------
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL---------------- 376 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~el---------------- 376 (466)
.|+++|.++|+++|+++|+|++|+.+..++++.+|+|++++|+||+++||++++||+++.++..
T Consensus 160 ~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~ 239 (425)
T PRK06084 160 IDIQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPD 239 (425)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999864321
Q ss_pred -----------------HHH-HHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCC
Q 012321 377 -----------------VTQ-IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 377 -----------------i~~-l~~~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL 438 (466)
... .......+|..+++++||+++++|+||..|++++++|+.+++++|++||.|++|+||++
T Consensus 240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l 319 (425)
T PRK06084 240 PSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGL 319 (425)
T ss_pred cccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 001 11224567899999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHhhcCC-cceEEEEEece
Q 012321 439 KSHPEHHIATQQMTG-FGGVVSFEVCV 464 (466)
Q Consensus 439 ~s~p~~~l~~~~~~g-~Ggl~sfel~~ 464 (466)
++||+|+++++||.| +||||||+|++
T Consensus 320 ~~~p~~~~~~~~~~g~~gg~~s~~~~~ 346 (425)
T PRK06084 320 PDHPEHELARRYMGGKPASILSFGIKG 346 (425)
T ss_pred CCcccHHHHHHhCCCCcceEEEEEecC
Confidence 999999999999987 89999999975
No 19
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-55 Score=459.03 Aligned_cols=294 Identities=36% Similarity=0.628 Sum_probs=268.8
Q ss_pred CCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccC
Q 012321 169 VTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA 248 (466)
Q Consensus 169 ~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~p 248 (466)
.+++++||||+|+||.|++.+++.+.+.+...+|.|+|++||+++.||++|++++|++.+++++|||+|+..++.+++++
T Consensus 6 ~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~ 85 (397)
T PRK05939 6 EHGAVHKPIHTSVTYGYEDARDLIDVFQGKKPGFTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRA 85 (397)
T ss_pred CCCCccCCccCCCCeecCCHHHHHHhhcCCcCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCC
Confidence 45789999999999999999888887766666799999999999999999999999999999999999999999999999
Q ss_pred CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCE
Q 012321 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAI 328 (466)
Q Consensus 249 GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gil 328 (466)
||+||++++.|+++..++.. ++..|+++.+++..|+++++++++++ |++|++|+|+||+|.+.|+++|+++||++|++
T Consensus 86 Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v~~~d~e~l~~~l~~~-tklV~vesp~NptG~v~dl~~I~~la~~~gi~ 163 (397)
T PRK05939 86 GDHLVSSQFLFGNTNSLFGT-LRGLGVEVTMVDATDVQNVAAAIRPN-TRMVFVETIANPGTQVADLAGIGALCRERGLL 163 (397)
T ss_pred CCEEEECCCccccHHHHHHH-HHhcCCEEEEECCCCHHHHHHhCCCC-CeEEEEECCCCCCCCHHhHHHHHHHHHHcCCE
Confidence 99999999999998776644 56789999999999999999999874 99999999999999999999999999999999
Q ss_pred EEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChH--------H-------------HHHHH-HHHHH
Q 012321 329 VCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------L-------------VTQIR-NLHHV 386 (466)
Q Consensus 329 lIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~e--------l-------------i~~l~-~~~~~ 386 (466)
+|+|++|+.+..+++..+|+|++++|+||+++|||+++||+++.+.. + +.+++ .....
T Consensus 164 livD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (397)
T PRK05939 164 YVVDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRD 243 (397)
T ss_pred EEEECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHh
Confidence 99999999888888999999999999999999999999998875321 1 12222 23446
Q ss_pred hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 387 LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 387 ~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+|..++|+++|+++||++||..||+++++|+.+|++||++||+|++|+||+|++||+|+++++||.|+||||||+|++
T Consensus 244 ~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~ 321 (397)
T PRK05939 244 MGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELAD 321 (397)
T ss_pred cCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999975
No 20
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=3.5e-55 Score=457.35 Aligned_cols=309 Identities=37% Similarity=0.589 Sum_probs=287.3
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|+.+.||+++++++|++.+++++
T Consensus 10 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~~ 87 (403)
T PRK07503 10 FSTRAIHHGYDPL--DHGGALVPPVYLTATFAFPTAEYGAECFAGEEEGHFYSRISNPTLALLEQRMASLEGGEAAVALA 87 (403)
T ss_pred ccchheeCCCCCC--CCCCCccCCcccCcceecCChHHHHHhhccccCCceeeCCCCchHHHHHHHHHHHhCCCcEEEEc
Confidence 6799999996542 23689999999999999999999888887666689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
||++|+.+++.+++++||+||++.+.|+.++.++...+...|+++.++|..|+++++++++++ |++|++|+|+||+|.+
T Consensus 88 sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~-tklV~le~p~NPtG~~ 166 (403)
T PRK07503 88 SGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALKAAISDK-TRMVYFETPANPNMRL 166 (403)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHHHhcCcc-CcEEEEeCCCCCCCee
Confidence 999999999999999999999999999988877776778889999999998999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHH--HHHHhCCC
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHVLGGA 390 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~--~~~~~G~~ 390 (466)
.|+++|.++|+++|+++|+|++|+.++..+++.+|+|++++|+||+++||+++++|+++++++++++++. .+...|..
T Consensus 167 ~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~ 246 (403)
T PRK07503 167 VDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAV 246 (403)
T ss_pred eCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCC
Confidence 9999999999999999999999998888888888999999999999999999999999999999998874 35567889
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++.+|+++++|+++..|++++++|++.++++|++||.|++|+||++++||+|+++++||.|+||||||++++
T Consensus 247 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~ 320 (403)
T PRK07503 247 MSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKG 320 (403)
T ss_pred CCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999974
No 21
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=3.8e-55 Score=454.08 Aligned_cols=302 Identities=33% Similarity=0.585 Sum_probs=277.7
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
.++|+++|.|...+ ..+++++|||+++++|.|++.. +..+|.|+||+||+.+.|+++|++++|.++++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~ 72 (382)
T TIGR02080 3 KQATIAVRSGLNSD--TQYGCVVPPIYLSTTYNFTGFN--------EPRAYDYSRSGNPTRDLLQQALAELEGGAGAVVT 72 (382)
T ss_pred CcccceeecCCCCC--CCCCCccCCeeCCceeEeCCcC--------ccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 47899999996542 2358999999999999987632 1236899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
++|++||.+++.+++++||+|+++.++|++++..+...+...++++.+++..|+++++++++++ ||+|++|+|+||||.
T Consensus 73 ~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~~-tklV~l~~p~NPtG~ 151 (382)
T TIGR02080 73 NTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQK-PKLVLIETPSNPLLR 151 (382)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCCE
Confidence 9999999999999999999999999999998887766666678899888888999999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++++|++|+.+..+.++..|+|++++|+|||++|++++++|++++ +++++++++.++..+|..
T Consensus 152 ~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~ 231 (382)
T TIGR02080 152 VVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVT 231 (382)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999888888888899999999999999999999999876 578889999888888999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++++|++++++++|..|++++++|+..+++||++||.|++|+||+|++||+|+++++||.|+||||||+|++
T Consensus 232 ~sp~~a~l~lr~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 305 (382)
T TIGR02080 232 GGAFDSYLTLRGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG 305 (382)
T ss_pred CCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999975
No 22
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=5.1e-55 Score=459.40 Aligned_cols=310 Identities=34% Similarity=0.586 Sum_probs=280.5
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|++++||+++|+++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~y~R~~~p~~~~le~~lA~l~g~~~av~~ 85 (433)
T PRK08134 8 GFDTLALHAGAAPD--PATGARAVPIHLTTSFVFRDSDHAAALFNLERAGHVYSRISNPTVAVLEERVAALEGGVGAIAT 85 (433)
T ss_pred CcchhheeCCCCCC--CCCCCccCCccCCCccccCCHHHHHHhhcccccCceeecCcChHHHHHHHHHHHHhCCCcEEEe
Confidence 37799999996532 3367999999999999999999888777656668999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+|||+|+.+++.+++++||+||++...|+++..++...+++.|++++++|..|+++++++|+++ |++|++++|+||+|.
T Consensus 86 sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i~~~-TklV~~e~~~np~g~ 164 (433)
T PRK08134 86 ASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAIRPN-TRLLFGETLGNPGLE 164 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCcccCc
Confidence 9999999999999999999999999999998888776677889999999988999999999885 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChH----------------
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~e---------------- 375 (466)
+.|+++|+++||++|+++|+|+++++++.++|+++|+|++++|.|||++||++++||+++....
T Consensus 165 v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~ 244 (433)
T PRK08134 165 VLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPY 244 (433)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCc
Confidence 9999999999999999999999999999999999999999999999999999999998874210
Q ss_pred ----------------HHHHH-HHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCC
Q 012321 376 ----------------LVTQI-RNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 376 ----------------li~~l-~~~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL 438 (466)
+..+. ......+|..+++++||+++++|+|++.|++++++|+.+++++|++||.|++|+||++
T Consensus 245 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l 324 (433)
T PRK08134 245 AGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPEL 324 (433)
T ss_pred ccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 00111 1233567889999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHhhc-CCcceEEEEEece
Q 012321 439 KSHPEHHIATQQM-TGFGGVVSFEVCV 464 (466)
Q Consensus 439 ~s~p~~~l~~~~~-~g~Ggl~sfel~~ 464 (466)
++||+|+++++|| .|+||||||+|++
T Consensus 325 ~~~p~~~~~~~~~~~g~gg~~s~~l~~ 351 (433)
T PRK08134 325 ESHPDHALAKRLLPRGAGSVFSFDLKG 351 (433)
T ss_pred CCCccHHHHHHhCCCCCceEEEEEecC
Confidence 9999999999999 7899999999975
No 23
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=5.7e-55 Score=454.46 Aligned_cols=311 Identities=23% Similarity=0.427 Sum_probs=288.6
Q ss_pred CCccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEE
Q 012321 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~ 230 (466)
.+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|++||++++||+++++++|.+.+++
T Consensus 8 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~ 85 (394)
T PRK07050 8 RALQTRIVQPDDQIP--PGFRSFVTPVARASTVVFPDLATMRALDWRQDVQWRYGLHATPTSLALAQRLAEIEGGRHALL 85 (394)
T ss_pred CCccchheECCCCCC--CCCCCccCCeeCCcceecCCHHHHHhhcccccCCcccCCCCCHHHHHHHHHHHHHhCCCeEEE
Confidence 467899999996542 236899999999999999999888776655556899999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCc
Q 012321 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG 310 (466)
++||++|+.+++.+++++||+||++++.|+.+..++...+..+|+++.+++..+.++++++++++ ||+|++|+|+||+|
T Consensus 86 ~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~~-tklV~le~p~Np~~ 164 (394)
T PRK07050 86 QPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQPN-TRLIWLEAPGSVTM 164 (394)
T ss_pred eccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCc
Confidence 99999999999999999999999999999998877766677889999999877888999999875 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCC
Q 012321 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG 389 (466)
Q Consensus 311 ~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~ 389 (466)
.+.|+++|+++|+++|+++|+|++|+.+..++++.+|+|++++|+||+++||+++++|++++ +++++++++.++..+|.
T Consensus 165 ~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~ 244 (394)
T PRK07050 165 EVPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGI 244 (394)
T ss_pred cHhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999998997776 67888999988888899
Q ss_pred CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+++++++|+++++++++..|++++++|+.+|+++|++||.|.+|+||+|++||+|.++++||.++||||+|++++
T Consensus 245 ~~~~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~ 319 (394)
T PRK07050 245 GVSADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDE 319 (394)
T ss_pred CCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999975
No 24
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=5.5e-55 Score=458.80 Aligned_cols=310 Identities=31% Similarity=0.527 Sum_probs=280.5
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhc----------ccCCCccCCCCchhHHHHHHHHHhh
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEK----------RRASFEYGRYGNPTTVVVEEKMSAL 222 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~----------~~~~~~Y~R~~~p~~~~Lee~lA~l 222 (466)
+.|.++|.|.... ..+++++||||+++||.|++.+++.+.+.. ...+|.|+||+||+...||++||++
T Consensus 18 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~~lA~l 95 (427)
T PRK07049 18 PETQMLNYGYDPE--LSEGAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVEDRLAVY 95 (427)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHHHHHHH
Confidence 6789999996432 235899999999999999999887765532 1346999999999999999999999
Q ss_pred hCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE-EEEeCCCCHHHHHHhcc----CCCc
Q 012321 223 EGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-ATVIDPADMEGLEAALN----NNNV 297 (466)
Q Consensus 223 ~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~-v~~vd~~D~e~Le~ai~----~~~t 297 (466)
+|.+++++++||++||.+++.+++++||+|++++|.|+++..++...++.+|++ +.+.+..|.+++++++. ..++
T Consensus 96 eg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~t 175 (427)
T PRK07049 96 EGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRV 175 (427)
T ss_pred hCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCc
Confidence 999999999999999999999999999999999999999888776667788997 55556677888887664 2359
Q ss_pred eEEEEeCCCCCCcccccHHHHHHHHHh------cCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEE
Q 012321 298 SLFFTESPTNPFLRCVDVKLVSDLCHK------KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS 371 (466)
Q Consensus 298 klV~lesPsNPtG~v~dl~~I~ela~~------~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vv 371 (466)
++||+|+|+||||.+.|+++|.+++++ +++++|+||+|.+++.+.|+..|+|++++|+||+++|++++++|+++
T Consensus 176 klv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~vv 255 (427)
T PRK07049 176 SLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVL 255 (427)
T ss_pred eEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEEEE
Confidence 999999999999999999999999988 79999999999988888888889999999999999999999999999
Q ss_pred eChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCC--CCCcchHHHHh
Q 012321 372 GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL--KSHPEHHIATQ 449 (466)
Q Consensus 372 g~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL--~s~p~~~l~~~ 449 (466)
++++++++++..+..+|..++++.+|+++++++++..|++++++|++.++++|++||+|++|+|||+ ++||+|+++++
T Consensus 256 ~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~ 335 (427)
T PRK07049 256 GRKALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKR 335 (427)
T ss_pred CCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHh
Confidence 9999999999998889999999999999999999999999999999999999999999999999986 99999999999
Q ss_pred hcCCcceEEEEEece
Q 012321 450 QMTGFGGVVSFEVCV 464 (466)
Q Consensus 450 ~~~g~Ggl~sfel~~ 464 (466)
||.|+||||||+|++
T Consensus 336 ~~~g~g~~~s~~~~~ 350 (427)
T PRK07049 336 QCTGAGSTFSFDIKG 350 (427)
T ss_pred hCCCCccEEEEEEcC
Confidence 999999999999985
No 25
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=1e-54 Score=452.11 Aligned_cols=308 Identities=37% Similarity=0.637 Sum_probs=287.3
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|... ..++++.+|||+++||.+++.++....+.+...+|.|+|+++|+.++||+++++++|.+++++++
T Consensus 7 ~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~v~~s 83 (390)
T PRK08133 7 FDTLAVRAGQLR---SPFGEHSEALFLTSSFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALEGAEACVATA 83 (390)
T ss_pred cchhheeCCCCC---CCCCCccCCccCCCCcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 679999999643 23678999999999999999987776665555678999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
||++|+..++.+++++||+||++++.|++++..+...+...|+++.+++..|+++++++++++ |++|++|+|+||+|.+
T Consensus 84 sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~-tklV~ie~p~NptG~v 162 (390)
T PRK08133 84 SGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRPN-TKLFFLETPSNPLTEL 162 (390)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCCc
Confidence 999999999999999999999999999999888877778889999999998999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCch
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN 392 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls 392 (466)
.|+++|.++||++|+++|+|++|+.+..+.|+..|+|++++|+||+++|+++++||++++++++++++.......|..++
T Consensus 163 ~dl~~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~ 242 (390)
T PRK08133 163 ADIAALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLS 242 (390)
T ss_pred CCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999998888898899999999999999999999999999999988888888888899999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 393 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 393 ~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++.+|+++++++++..|++++++|+..++++|+++|.|++|+||+|++||+|+++++||.|+||||||+|+|
T Consensus 243 ~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 314 (390)
T PRK08133 243 PFNAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG 314 (390)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999985
No 26
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=1.1e-54 Score=452.93 Aligned_cols=308 Identities=36% Similarity=0.583 Sum_probs=284.0
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|... ..++++.+|||.+++|.|++.++..+.+.+...+|.|+||++|+...||+++++++|.+.+++++
T Consensus 11 ~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~~~~~ 87 (398)
T PRK07504 11 PATRLVHSGTLR---SQFGETSEALFLTQGFVYDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDARATA 87 (398)
T ss_pred cccceeeCCCCC---CCCCCCcCCeECCCCccCCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCeeeEec
Confidence 679999999632 23578899999999999999887776666556689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
+|++|+..++.+++++||+|+++++.|+++...+...++..|+++.+++..|+++++++++++ ||+|++|+|+||+|.+
T Consensus 88 sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~~-tklV~lesp~NptG~v 166 (398)
T PRK07504 88 SGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRPN-TKVFFLESPTNPTLEV 166 (398)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCcEe
Confidence 999999988888899999999999999998877766677889999999988999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHH-HHHHHHHHhCCCc
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~-~l~~~~~~~G~~l 391 (466)
.|+++|.++|+++|+++|+|++|+.++.+.+..+|+|++++|+||+++|||+.+||+++++++++. +++......|..+
T Consensus 167 ~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~ 246 (398)
T PRK07504 167 IDIAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSL 246 (398)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999888888889999999999999999999999999999888775 5666677889999
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+++.+|+++++|+++..|++++++|+++++++|++||.|.+|+||||++||+|+++++||+|+||||||+|++
T Consensus 247 s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 319 (398)
T PRK07504 247 SPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKG 319 (398)
T ss_pred CHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975
No 27
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=1.5e-54 Score=449.31 Aligned_cols=300 Identities=37% Similarity=0.668 Sum_probs=276.7
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|...+ ..+++++||||+|+||.|++.. ...+|.|+|+++|++..||+++++++|.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~~~ 72 (380)
T PRK06176 3 MQTKLIHGGISED--TTTGAVSVPIYQTSTYRQDAIG--------RPKGYEYSRSGNPTRFALEELIADLEGGVKGFAFA 72 (380)
T ss_pred ccceeeECCCCCC--CCCCCccCCcccCCceecCCCC--------CcCCCcccCCCChhHHHHHHHHHHHhCCCCEEEEC
Confidence 5788999996542 2367999999999999998731 23579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
|||+|+.+++ .++++||+|+++++.|++++..+...+...|++++++|..|+++++++++++ |++|++|+|+||+|.+
T Consensus 73 SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai~~~-t~lV~lesP~Nptg~~ 150 (380)
T PRK06176 73 SGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAIKPN-TKALYLETPSNPLLKI 150 (380)
T ss_pred CHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhcCcC-ceEEEEECCCCCCcee
Confidence 9999998665 6789999999999999999888877788899999999999999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCCCc
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~~l 391 (466)
.|+++|.++||++|+++|+|++|+.++..+|+.+|+|++++|++|+++||+++++|+++++ +++.++++.++...|..+
T Consensus 151 ~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~ 230 (380)
T PRK06176 151 TDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVL 230 (380)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999888889999999999999999999999999998875 577788888888889999
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+++++|+++++++++..||+++++|+.+++++|++||.|.+|+||+|++||+|+++++||+|+||||||+|++
T Consensus 231 ~~~~~~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 303 (380)
T PRK06176 231 GPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN 303 (380)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999974
No 28
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=2.3e-54 Score=447.86 Aligned_cols=307 Identities=38% Similarity=0.650 Sum_probs=285.5
Q ss_pred cccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeCC
Q 012321 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (466)
Q Consensus 154 ~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~S 233 (466)
.|+++|.|... ..++++++|||+++||.|++.++..+.+.+...+|.|+|+++|+..+||+++++++|.+.+++++|
T Consensus 1 ~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~s 77 (380)
T TIGR01325 1 ATLAIRGGKER---TEFREHAEALFLTSSFVYDSAAHAADRFAGEIPGFVYSRYANPTVAAFEERIAALEGAERAVATAT 77 (380)
T ss_pred CceeEECCCCC---CCCCCccCCeeCCcceecCCHHHHHHhhccccCCcceecCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 37789998632 236789999999999999998877766655556799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc
Q 012321 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (466)
Q Consensus 234 G~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~ 313 (466)
|++|+.+++.+++++||+||++.+.|++++..+...++.+|+++.+++..|+++++++++++ +++|++|+|+||+|.+.
T Consensus 78 G~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~-tklV~le~p~np~g~~~ 156 (380)
T TIGR01325 78 GMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKPN-TKLVFVETPSNPLGELV 156 (380)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCCeee
Confidence 99999999999999999999999999998888877788899999999988999999999874 99999999999999999
Q ss_pred cHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchH
Q 012321 314 DVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP 393 (466)
Q Consensus 314 dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~ 393 (466)
|+++|.++||++|+++|+|++|+.++.++++.+|+|++++|+||+++||++++||+++++++++++++......|..+++
T Consensus 157 dl~~I~~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p 236 (380)
T TIGR01325 157 DIAALAELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSP 236 (380)
T ss_pred CHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCH
Confidence 99999999999999999999999888888999999999999999999999999999999999999998888888999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 394 NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 394 ~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+.+|+++++++++..|++++++++++++++|++||.|++|+||++++||+|+++++||+|+||||||+|++
T Consensus 237 ~~a~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~ 307 (380)
T TIGR01325 237 FNAWVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVAD 307 (380)
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999974
No 29
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.2e-54 Score=448.85 Aligned_cols=303 Identities=35% Similarity=0.563 Sum_probs=273.5
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
.+|.++|.|... ..+++++||||+++||.+++.+. +.+...+|.|+|++||++++||+++++++|.+++++++
T Consensus 3 ~~t~~~~~~~~~---~~~~~~~~pi~~~st~~~~~~~~----~~~~~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~~~ 75 (385)
T PRK08574 3 RGTDAVRGYRGS---DPYGSLQPPIYLTALFRQEGEAY----PSDRGFDLKYSREENPTLRPLEEALAKLEGGVDALAFN 75 (385)
T ss_pred ccceeeecCCCC---CCCCCccCCccCCcceecCcchh----hcCCcCCceEECCCCccHHHHHHHHHHHhCCCcEEEeC
Confidence 568899987442 23689999999999999887532 22334579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
||++|+..++.+++++||+|+++.+.|+++...+... ...|+++.+++. |++++++++++.++++|++|+|+||+|.+
T Consensus 76 sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~-d~~~l~~~i~~~~tklV~ie~p~NPtG~v 153 (385)
T PRK08574 76 SGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYP-STEDIIEAIKEGRTKLVFIETMTNPTLKV 153 (385)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECC-CHHHHHHhcCccCceEEEEECCCCCCCEe
Confidence 9999999999999999999999999999988777553 677999887764 68999999987349999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEE-eChHHHHHHHHHHHHhCCCc
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vv-g~~eli~~l~~~~~~~G~~l 391 (466)
.|+++|+++||++|+++|+|++|+.++..+++.+|+|++++|+||+++||+|++||+++ .+++++++++.++..+|..+
T Consensus 154 ~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~ 233 (385)
T PRK08574 154 IDVPEVAKAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIM 233 (385)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999888899999999999999999999999899555 46788899988888889999
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcC--CcceEEEEEece
Q 012321 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT--GFGGVVSFEVCV 464 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~--g~Ggl~sfel~~ 464 (466)
+++.+|+++++++++..|++++++|+.+++++|+++|.|++|+||||++||+|+++++||+ |+||||||+|++
T Consensus 234 ~p~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~ 308 (385)
T PRK08574 234 QPFEAYLVLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKG 308 (385)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999996 799999999975
No 30
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=6.6e-54 Score=447.85 Aligned_cols=302 Identities=36% Similarity=0.593 Sum_probs=277.9
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|.|...+ ..+++++|||+++++|.|++.. ...+|.|+|+++|+.+.|+++|++++|.++++++
T Consensus 12 ~~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~~ 81 (405)
T PRK08776 12 SAATAAVRAGIDRD--TAYGAVTPPIVLSSNFSFDGFG--------NKRQYDYTRSGNPTRDLLGEALAELEGGAGGVIT 81 (405)
T ss_pred CccchheeCCCCCC--CCCCCccCCEeccceEEeCCCC--------cccCCcccCCCChHHHHHHHHHHHHhCCCceEEE
Confidence 47899999996542 3468999999999999998732 2236899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+|||+|+.+++.+++++||+|+++.+.|+++..++...++..|+++..++..|+++|++++++ +|++|++|+|+||+|.
T Consensus 82 ~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~-~tklV~l~~P~NPtG~ 160 (405)
T PRK08776 82 ATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQ-SPKLVLIETPSNPLLR 160 (405)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999887777777778999999998899999999987 4999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++|+.+..+.|+.+|+|++++|+||+++||+++++|++++ ++++.++++..+...|..
T Consensus 161 v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~ 240 (405)
T PRK08776 161 ITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLT 240 (405)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999888788888999999999999999999998998877 577888888878888888
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++++|++++++++++.|++++++|+..++++|+++|.|.+|+||++++||+|+++++||.|+||||||+|+|
T Consensus 241 ~s~~~a~l~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 314 (405)
T PRK08776 241 GSPFDAFLTLRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG 314 (405)
T ss_pred CCHHHHHHHHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999975
No 31
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1e-53 Score=442.70 Aligned_cols=300 Identities=38% Similarity=0.687 Sum_probs=275.4
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|+|...+ ..+++++||||+++||.+++.. ...+|.|+|+++|+...||+++++++|.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~~~~ 72 (377)
T PRK07671 3 AKTKLIHGGIIGD--PSTGAVSVPIYQVSTYKQEAVG--------KHQGYEYSRTGNPTRAALEELIAVLEGGHAGFAFG 72 (377)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCCC--------CcCCCCcCCCCChHHHHHHHHHHHHhCCCceEEeC
Confidence 5799999996542 2357899999999999988742 23469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
|||+|+..++ .++++||+||++++.|++++..+...++..|+++.+++..|+++++++++++ |++|++|+|+||+|.+
T Consensus 73 sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~-tklV~le~P~NPtg~~ 150 (377)
T PRK07671 73 SGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRPN-TKAIYVETPTNPLLKI 150 (377)
T ss_pred CHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCCcc
Confidence 9999887665 6789999999999999988877777778889999999988999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCc
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~l 391 (466)
.|+++|.++|+++|+++|+|++|+.++..+++.+|+|++++|+||+++||+++++|+++. +++++++++.++...|..+
T Consensus 151 ~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~ 230 (377)
T PRK07671 151 TDIKKISTIAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGIL 230 (377)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999888888899999999999999999999988998776 5678899999898889999
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+++.+|+++++++++..|++++++|++.|+++|+++|+|.+|+||+|++||+|+++++||.|+||||||++++
T Consensus 231 ~~~~a~l~~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 303 (377)
T PRK07671 231 GPQDSWLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGS 303 (377)
T ss_pred CHHHHHHHHcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999953
No 32
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.3e-53 Score=443.46 Aligned_cols=302 Identities=39% Similarity=0.656 Sum_probs=277.8
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|.++|.|...+ ..+++++||||+++||.+++.+. ...+|.|+|+++|+...||++|++++|.+.+++++
T Consensus 13 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~-------~~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~ 83 (388)
T PRK07811 13 FATRAIHAGYEPD--PATGAVNPPIYASSTFAQDGVGG-------LRGGYEYARTGNPTRTALEEQLAALEGGAYGRAFS 83 (388)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCccc-------ccCCCcccCCCCccHHHHHHHHHHHhCCCceEEeC
Confidence 6799999996542 33688999999999999887532 12468999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
||++|+.+++.+++++||+||++++.|++++..+...++.+|+++.+++..|+++|+++++++ ||+|++|+|+||+|.+
T Consensus 84 sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i~~~-tklV~ie~p~NPtg~~ 162 (388)
T PRK07811 84 SGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAITPR-TKLIWVETPTNPLLSI 162 (388)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhcCcC-CeEEEEECCCCCccee
Confidence 999999999999999999999999999998887777777889999999988999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCCCc
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~~l 391 (466)
.|+++|.++|+++|+++|+|++|+.+....++..|+|++++|++|+++||+++++|+++++ +++.++++..+...|..+
T Consensus 163 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~ 242 (388)
T PRK07811 163 TDIAALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVP 242 (388)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999888888889999999999999999999889988875 677788887777778889
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+++++|+++++|+++..|++++++|++.++++|++||.|++|+||+|++||+|+++++||.|+||||||+|++
T Consensus 243 s~~~a~l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 315 (388)
T PRK07811 243 GPFDAYLTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAG 315 (388)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975
No 33
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.7e-53 Score=444.32 Aligned_cols=309 Identities=36% Similarity=0.621 Sum_probs=285.2
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|.++|.|...+ ..++++++|||.+++|.+++.+++.+.+.....+|.|+||++|+...||++|++++|.+++++++
T Consensus 9 ~~t~~~~~~~~~~--~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~iA~~~g~~~~l~~~ 86 (400)
T PRK06234 9 FATKAIHGGHIGD--KQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVVAA 86 (400)
T ss_pred ccchheECCCCCC--CCCCCccCCcccccceecCChHHHHHhhccCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEEc
Confidence 5799999996532 23688999999999999999887777665545678999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
||++|+..++.+++++||+|+++.+.|+.++..+...++..|+++.+++..|+++++++++++ |++|++|+|+||+|.+
T Consensus 87 sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~~-tklI~iesP~NPtG~v 165 (400)
T PRK06234 87 SGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKAN-TKVVYLETPANPTLKV 165 (400)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhccC-CeEEEEECCCCCCCCc
Confidence 999999999999999999999999999998888777778899999999999999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhc--CCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH--HHHhC
Q 012321 313 VDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLG 388 (466)
Q Consensus 313 ~dl~~I~ela~~~--gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~--~~~~G 388 (466)
.|+++|.++|+++ |+++|+|++|+.++...++.+|+|++++|+||+++|++++++|+++++++++++++.. +..+|
T Consensus 166 ~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g 245 (400)
T PRK06234 166 TDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTG 245 (400)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcC
Confidence 9999999999997 9999999999998888888889999999999999999999999999999998888753 44678
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 389 ~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
..++++.+|++++++++++.|++++++|+++++++|++||.|.+|+||+|++||+|+++++||+|+||||||++++
T Consensus 246 ~~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~ 321 (400)
T PRK06234 246 SVIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG 321 (400)
T ss_pred CCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999985
No 34
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.8e-53 Score=447.45 Aligned_cols=310 Identities=31% Similarity=0.486 Sum_probs=278.9
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|.|...+ ..+++++||||+++||.|++.+++.+.+.....+|.|+|.++|+...||++|++++|.+.++++
T Consensus 7 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~~ 84 (427)
T PRK05994 7 GFATLAVHAGAQPD--PTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRITNPTNAVLEERVAALEGGTAALAV 84 (427)
T ss_pred CcchhheECCcCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhccccCCcceECCCCccHHHHHHHHHHHhCCCcEEEE
Confidence 47799999995432 2357899999999999999998777766544456899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+|||+|+.+++.+++++||+||++.+.|+++...+...+...|+++.++|..|+++++++++++ |++|++|+|+||+|.
T Consensus 85 ~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~-tklV~vesp~NptG~ 163 (427)
T PRK05994 85 ASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAITPR-TKAIFIESIANPGGT 163 (427)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCe
Confidence 9999999999999999999999999999998877777777889999999998999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeCh-----------------
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG----------------- 374 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~----------------- 374 (466)
+.|+++|.++|+++|+++|+|+++++++.++++++|+|++++|+||+++||++.+||+++...
T Consensus 164 v~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~ 243 (427)
T PRK05994 164 VTDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPR 243 (427)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCc
Confidence 999999999999999999999999999999999999999999999999999999999988522
Q ss_pred -H-----HHHH----------HHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCC
Q 012321 375 -K-----LVTQ----------IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 375 -e-----li~~----------l~~~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL 438 (466)
+ +.+. ........|..+++++||+++++|++|+.|++++++|+..++++|++||+|++|+||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l 323 (427)
T PRK05994 244 PEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGL 323 (427)
T ss_pred chhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 1 1111 11234567899999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHhhc-CCcceEEEEEece
Q 012321 439 KSHPEHHIATQQM-TGFGGVVSFEVCV 464 (466)
Q Consensus 439 ~s~p~~~l~~~~~-~g~Ggl~sfel~~ 464 (466)
++||+|+++++|+ +|+||||||+|+|
T Consensus 324 ~~~~~~~~~~~~~~~g~g~~~sf~l~~ 350 (427)
T PRK05994 324 PDDPYHALAQKYSPKGAGAVFTFGLKG 350 (427)
T ss_pred CCCccHHHHHHhcCCCceEEEEEEecC
Confidence 9999999999997 8999999999985
No 35
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=2.3e-53 Score=449.03 Aligned_cols=299 Identities=33% Similarity=0.601 Sum_probs=271.9
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|...+ .+++++||||+++||.+++.. ....|.|+|.++|++++||+++++++|.+.+++++
T Consensus 87 ~~t~~~~~~~~~~---~~~~~~~Pi~~sst~~~~~~~--------~~~~~~Y~r~gnpt~~aLE~~lA~leg~e~ai~~~ 155 (464)
T PLN02509 87 VSTLLVNLDNKFD---PFDAMSTPLYQTATFKQPSAI--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFT 155 (464)
T ss_pred cchHheeCCCCCC---CCCCccCCccccceecCcccc--------ccCCCccCCCCCHHHHHHHHHHHHHhCCCEEEEeC
Confidence 7899999995532 357899999999999987731 22469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
||++|+.+++ .++++||+||++++.|+++..++...+...|+++.+++..|+++++++++++ |++|++|+|+||+|.+
T Consensus 156 SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~~-TklV~lesPsNPtG~i 233 (464)
T PLN02509 156 SGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGPQ-TKLVWLESPTNPRQQI 233 (464)
T ss_pred cHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCcC-CeEEEEECCCCCCCCH
Confidence 9999986655 6789999999999999998887777777889999999988999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCCCc
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~~l 391 (466)
.|+++|+++|+++|+++|+|++++.++.++++.+|+|++++|++||++||+++++|+++++ +.+.++++.++...|..+
T Consensus 234 ~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l 313 (464)
T PLN02509 234 SDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGL 313 (464)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999988899999999999999999999999999999875 455667777777778889
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++||+++++|++|..|++++++++++++++|++||.|++|+||||++||+|+++++||+|+||||||++.+
T Consensus 314 ~p~~A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~ 386 (464)
T PLN02509 314 APFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS 386 (464)
T ss_pred CHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999943
No 36
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=4.3e-53 Score=443.61 Aligned_cols=309 Identities=38% Similarity=0.640 Sum_probs=277.3
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|.++|.|...+ ..+++++||||+++||.|++.+++.+.+.....+|.|+|+++|+.+.||++|++++|.+.+++++
T Consensus 2 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~~~ 79 (418)
T TIGR01326 2 FETLQLHAGQEPD--PTTGSRAVPIYQTTSYVFDSTEHAAALFGLQEAGNIYSRLMNPTTDVLEQRIAALEGGVAALAVA 79 (418)
T ss_pred ccceeEECCCCCC--CCCCCccCCccCCCCeecCCHHHHHHhhccCcCCceeECCCChhHHHHHHHHHHHhCCCeEEEEc
Confidence 5789999996532 23578999999999999999988776665444568999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
|||+|+..++.+++++||+||++++.|++++..+...++..|+++.+++..|+++++++++++ +++|++|+|+||+|.+
T Consensus 80 sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~-t~~V~le~p~NPtg~v 158 (418)
T TIGR01326 80 SGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFEKAIDEN-TKAVFAETIGNPAINV 158 (418)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCee
Confidence 999999999999999999999999999998888777778889999999988999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHH----------------
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL---------------- 376 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~el---------------- 376 (466)
.|+++|.++|+++|+++|+|++|+.+....++..|+|++++|+||+++|+|+++||+++.++++
T Consensus 159 ~dl~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~ 238 (418)
T TIGR01326 159 PDIEAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPS 238 (418)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCc
Confidence 9999999999999999999999998888888888999999999999999999988888854321
Q ss_pred ---------------HHHHH-HHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCC
Q 012321 377 ---------------VTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKS 440 (466)
Q Consensus 377 ---------------i~~l~-~~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s 440 (466)
+.+.+ ......|..++|+++|+++++++|+..|++++.+|+..++++|.+||+|.+|+||||++
T Consensus 239 q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~ 318 (418)
T TIGR01326 239 YHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLAS 318 (418)
T ss_pred cccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 11111 34456788899999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHhhc-CCcceEEEEEece
Q 012321 441 HPEHHIATQQM-TGFGGVVSFEVCV 464 (466)
Q Consensus 441 ~p~~~l~~~~~-~g~Ggl~sfel~~ 464 (466)
||+|+++++|| .|+||||||+|++
T Consensus 319 ~~~~~~~~~~~~~g~g~~~s~~l~~ 343 (418)
T TIGR01326 319 HPHHALAKKYLPKGFGAVLSFEIKG 343 (418)
T ss_pred CccHHHHHHhccCCCcceEEEEecC
Confidence 99999999999 7999999999975
No 37
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=7.1e-53 Score=436.25 Aligned_cols=297 Identities=41% Similarity=0.695 Sum_probs=273.6
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|.++|.|.+ ..+++++||||+++||.|++. .+|.|+|.++|+.++||+++++++|.+.++++
T Consensus 2 ~~~t~~~~~~~~----~~~~~~~~pi~~~~~~~~~~~-----------~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~~ 66 (376)
T PRK06460 2 KDATRTVREDID----EATGAITTPIYQTTAYHYPEG-----------EKYRYSREANPTVLELTKKIVELENAEMGVAF 66 (376)
T ss_pred CcceeeeecCCC----CCCCCccCCccCCcceeeCCC-----------CCcceeCCCCccHHHHHHHHHHHhCCCcEEEe
Confidence 478999999952 235789999999999999863 26999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
++|++|+..++.+++++||+|+++.+.|++++..+...++..|+++..++..+.+.+++.+++ ++++|++|+|+||+|.
T Consensus 67 ~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~-~tklV~l~sp~NPtG~ 145 (376)
T PRK06460 67 SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSK-RYDVVFVENITNPLLR 145 (376)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCc
Confidence 999999999999999999999999999999888887778888999998887666666666555 4999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l 391 (466)
+.|+++|.++|+++|+++|+|++|+.++...++..++|++++|+||+++|++|.++|+++++++++++++..+..+|..+
T Consensus 146 v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~ 225 (376)
T PRK06460 146 VVDITELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSL 225 (376)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998877777778899999999999999998899999999999999998888889889
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++..+|++++++++++.|++++++|+++|+++|++||.|++|+||+|++||+|+++++||+|+||||||++++
T Consensus 226 ~~~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~ 298 (376)
T PRK06460 226 DPHAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNG 298 (376)
T ss_pred CHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975
No 38
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=7.5e-53 Score=434.79 Aligned_cols=293 Identities=48% Similarity=0.827 Sum_probs=278.1
Q ss_pred CCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCC
Q 012321 171 DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG 250 (466)
Q Consensus 171 ~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD 250 (466)
++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|+.++||+++++++|.+++++++||++|+..++.+++++||
T Consensus 1 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd 80 (369)
T cd00614 1 GAVAPPIYQTSTFVFPSPAEAADLFALREGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGD 80 (369)
T ss_pred CCcCCCccCCCceecCCHHHHHHhhcCCcCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCC
Confidence 36899999999999999998888877767789999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEE
Q 012321 251 HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 251 ~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillI 330 (466)
+|+++.+.|++++..+...++..|+++.+++..|++++++++++ ++++|++|+|+||+|.+.|+++|+++||++|+++|
T Consensus 81 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~li 159 (369)
T cd00614 81 HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLV 159 (369)
T ss_pred EEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEE
Confidence 99999999999988877777788999999999899999999987 49999999999999999999999999999999999
Q ss_pred EeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHHH
Q 012321 331 IDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLR 409 (466)
Q Consensus 331 vD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~~R 409 (466)
+|++|+.++.++++.+|+|++++|+||+++||+++++|++++++ +++++++..+..+|..++++.+|+++++++++..|
T Consensus 160 vD~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r 239 (369)
T cd00614 160 VDNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPLR 239 (369)
T ss_pred EECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHHH
Confidence 99999999888899999999999999999999999999999987 89999998888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 410 ~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++++|+++++++|+++|.|.+|+||+|++||+|+++++|+.|+||||||++++
T Consensus 240 ~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~ 294 (369)
T cd00614 240 MERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG 294 (369)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999974
No 39
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.1e-52 Score=436.23 Aligned_cols=304 Identities=34% Similarity=0.559 Sum_probs=280.2
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+||++|+.++||+++++++|.++++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al~~ 82 (386)
T PRK06767 5 HMETALIHHGYTSE--EHKGSLTPPLFQTSTFTFETAQQGEASFAGVDPSYIYSRLGNPTVKLFEERMAVLEGGEEALAF 82 (386)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCccceecCCHHHHHHhhccCcCCccccCCCCcchHHHHHHHHHHhCCCcEEEE
Confidence 36799999996542 2357999999999999999998888888776678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+||++|+..++.+++++||+|+++.+.|+.++..+.......|+++.+++..|+++++++++++ |++|++|+|+||+|.
T Consensus 83 ~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~i~~~-tklV~lesp~NptG~ 161 (386)
T PRK06767 83 GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENKIRPN-TKLIFVETPINPTMK 161 (386)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhhCcC-ceEEEEeCCCCCCce
Confidence 9999999999999999999999999999999888877777789999888888999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHH-HHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI-RNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l-~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++|+.++.+.++..|+|++++|+||+++||+++++|++++++++++++ +..+..+|+.
T Consensus 162 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~ 241 (386)
T PRK06767 162 LIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGI 241 (386)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999988888888899999999999999999999899999999888775 4556668888
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++.+|+++++|+++..|++++++++++++++|+++|+|+.|+|| +|+++++||.++||||||++++
T Consensus 242 ~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~~~gg~vsf~l~~ 309 (386)
T PRK06767 242 MAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMKRGGGVISFSIKG 309 (386)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCCCCCceEEEEEcC
Confidence 9999999999999999999999999999999999999999999999 7899999999999999999975
No 40
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=1.3e-52 Score=434.54 Aligned_cols=302 Identities=36% Similarity=0.627 Sum_probs=271.6
Q ss_pred CCccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEE
Q 012321 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~ 230 (466)
++++|.++|.|...+ ..+++++||||+++||.|++.++..........+|.|+|+++|++++||+++++++|++.+++
T Consensus 7 ~~~~t~~~~~~~~~~--~~~~~~~~pI~~ss~~~~~~~~~~~~~~~~~~~~~~Y~r~~~P~~~~lE~~la~leg~~~av~ 84 (384)
T PRK06434 7 NGFNTRAVQSGELRD--PRFGNVTTPIFETSTFVYPNSEKEAYMDSTRGMPYIYTRWGNPTVQAFEEKYAVLENAEHALS 84 (384)
T ss_pred CCcccceeECCCCCC--CCCCCccCCeeCCcceecCChHHhhhccccccCCcceeCCCChhHHHHHHHHHHHhCCCcEEE
Confidence 457899999986532 346899999999999999998766533322235799999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCc
Q 012321 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG 310 (466)
++|||+||.+++.+++++||+||++...|++++.++...+..+|+++.++|..+.+.++ +++.++++|++|+|+||++
T Consensus 85 ~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~ 162 (384)
T PRK06434 85 FSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTL 162 (384)
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCc
Confidence 99999999999999999999999999999999988878888899999999987656655 5554599999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCC
Q 012321 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG 389 (466)
Q Consensus 311 ~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~ 389 (466)
.+.|+++|+++||+++ +++|+|+++++.++|+..|+|++++|.||+++||++++||++++ ++++.++++..+..+|.
T Consensus 163 ~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~ 240 (384)
T PRK06434 163 KVPDIKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGS 240 (384)
T ss_pred eeecHHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCC
Confidence 9999999999999998 56799999999999999999999999999999999999999987 45677888877778899
Q ss_pred CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
.+++++||+++++|++++.|++++++|+++++++|++||+|++|+||||+ ++++||+|+||||||+|++
T Consensus 241 ~~~~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~g~g~~~sf~l~~ 309 (384)
T PRK06434 241 NPDPIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLRGFGGMLSFELRS 309 (384)
T ss_pred CCCHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcCCCCceEEEEECC
Confidence 99999999999999999999999999999999999999999999999995 8999999999999999975
No 41
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=2.3e-52 Score=431.00 Aligned_cols=298 Identities=35% Similarity=0.566 Sum_probs=268.6
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
++.|+++|.|...+ ..+++++||||+++||.|++. .+..+|.|+||++|+..+|+++|++++ .++++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~--------~~~~~~~y~ry~~p~~~~Le~~lA~l~-~~~~v~~ 71 (366)
T PRK07582 3 GDGTRSVHAGGPEA--VPGEPVLPGPVFAAPYHLSPG--------EPTGPDTYGRASNPTWRALEAALGELE-GAEALVF 71 (366)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccccceEEccCc--------cccCCceeECCCCccHHHHHHHHHHHc-CCCEEEE
Confidence 47799999985432 235799999999999999853 123468899999999999999999999 7889999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+||++|+..++.+++++||+||++++.|+++..++...++.+|+++.+++..+... .+.+ ++++|++|+|+||+|.
T Consensus 72 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~---~~~~-~t~lV~le~p~NPtg~ 147 (366)
T PRK07582 72 PSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE---AALA-GADLVLAETPSNPGLD 147 (366)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH---Hhcc-CceEEEEECCCCCCCC
Confidence 99999999999999999999999999999988777666777899999998765432 2334 4999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|+++||++|+++++|++|+.+..+.++++|+|++++|+||+++||+++++|++++ +++++++++.++...|..
T Consensus 148 v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~ 227 (366)
T PRK07582 148 VCDLAALAAAAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAI 227 (366)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998887788888999999999999999999999999987 478889999888888999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++.+|++++++++++.|++++++|++.++++|++||.|.+|+||||++||+|+++++||+|+||||||++++
T Consensus 228 ~~~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~ 301 (366)
T PRK07582 228 PGPFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELAD 301 (366)
T ss_pred CCHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999974
No 42
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=6.3e-52 Score=429.48 Aligned_cols=299 Identities=34% Similarity=0.607 Sum_probs=273.4
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|... . .+++++||||+++||.+++.+ ...+|.|+|.++|++++||+++++++|.+++++++
T Consensus 1 ~~t~~~~~~~~~--~-~~~~~~~pi~~~~~~~~~~~~--------~~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~ 69 (378)
T TIGR01329 1 LSTLLVNTDNKN--D-PYDASSMPIYQTATFKQPLAI--------ENGPYDYTRSGNPTRTALESLLAKLDKADRAFAFS 69 (378)
T ss_pred CCceeEeCCCCC--C-CCCCcCCCeecCcceecCCcc--------ccCCCccCCCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 368899999542 2 267899999999999988642 22469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
||++|+.+++. ++++||+||++++.|+++..++...++..|+++.+++..|++++++++++ +|++|++|+|+||+|.+
T Consensus 70 sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~-~tklv~le~psnptg~v 147 (378)
T TIGR01329 70 SGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGP-KTKLVLLESPTNPLQKI 147 (378)
T ss_pred CHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCee
Confidence 99999988765 88999999999999999887777777788999999999999999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCCCc
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~~l 391 (466)
.|+++|+++||++|+++|+|++++.+..+.++.+|+|++++|++|+++||+++++|+++++ +++.++++..+...|..+
T Consensus 148 ~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~ 227 (378)
T TIGR01329 148 VDIRKISEMAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGL 227 (378)
T ss_pred ecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcC
Confidence 9999999999999999999999999988899999999999999999999999889999875 566688888877789899
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+++++|+++++++++..|++++++|+..++++|++||.|.+|+||+|++||+|+++++++.|+||||||++++
T Consensus 228 ~~~~a~l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~ 300 (378)
T TIGR01329 228 APFDCWLLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS 300 (378)
T ss_pred CHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999964
No 43
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=6.7e-52 Score=434.25 Aligned_cols=307 Identities=31% Similarity=0.557 Sum_probs=276.5
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhccc----CCCccCCCCchhHHHHHHHHHhhhCCCc
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR----ASFEYGRYGNPTTVVVEEKMSALEGAES 227 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~----~~~~Y~R~~~p~~~~Lee~lA~l~g~e~ 227 (466)
.+.++++|+|...+ .+++++||||+|+||.|++.+++.+.+.+.. .+|.|+|++||++++||+++++++|.+.
T Consensus 17 ~~~~~~~~~~~~~~---~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~~ 93 (418)
T PLN02242 17 DPAAALASARHEFG---EHGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTEA 93 (418)
T ss_pred ChHHHHhcCCCCCC---CCCCccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCCe
Confidence 36688999998753 2367899999999999999998888776542 3589999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcc-cCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCC
Q 012321 228 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 228 ~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~-~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPs 306 (466)
+++++||++|+.+++.+++++||+|+++.+.|+++...+...+. ..|+++++++..|+++++++++++++++|++|+|+
T Consensus 94 ~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~ 173 (418)
T PLN02242 94 AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESIS 173 (418)
T ss_pred EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCC
Confidence 99999999999999999999999999999999988776655543 47999999998899999999986349999999999
Q ss_pred CCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH-
Q 012321 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH- 385 (466)
Q Consensus 307 NPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~- 385 (466)
||||.+.|+++|+++|+++|++||+|++|. ++..++..+|+|++++|+||+++|++++++|+++++++++++++..+.
T Consensus 174 NPtG~v~dl~~I~~la~~~gi~livDea~~-~~~~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~ 252 (418)
T PLN02242 174 NPTLTVADIPELARIAHEKGVTVVVDNTFA-PMVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHG 252 (418)
T ss_pred CCCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCCCHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhh
Confidence 999999999999999999999999999996 555677888999999999999999999999999999999998887643
Q ss_pred ---HhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhc---CCcceEEE
Q 012321 386 ---VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM---TGFGGVVS 459 (466)
Q Consensus 386 ---~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~---~g~Ggl~s 459 (466)
..|..++++.||+++++++++..|++++++|+++++++|++++ .+|+||+|++||+|+++++|| .|+|||||
T Consensus 253 ~~~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~--~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~s 330 (418)
T PLN02242 253 ALMLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG--LKVIYPGLEDHPQHALLKSMANKGYGFGGLLC 330 (418)
T ss_pred hhhccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC--CEEECCCCCCCccHHHHHHhcccCCCceeEEE
Confidence 4677889999999999999999999999999999999999996 389999999999999999999 59999999
Q ss_pred EEece
Q 012321 460 FEVCV 464 (466)
Q Consensus 460 fel~~ 464 (466)
|++++
T Consensus 331 f~l~~ 335 (418)
T PLN02242 331 LDMDT 335 (418)
T ss_pred EEECC
Confidence 99974
No 44
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.9e-51 Score=427.47 Aligned_cols=300 Identities=36% Similarity=0.614 Sum_probs=277.0
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|.|...+ ..++++++|||+++||.+++.++ ..+|.|+|.++|+.+.||+++++++|.+.+++++
T Consensus 7 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~ 76 (390)
T PRK08064 7 IDTLLLHNQYKHD--KQTGAVNVPIYHASTFHQFDFDT--------FGKYDYSRSGNPTREALEDIIAELEGGTKGFAFA 76 (390)
T ss_pred cccceeeCCCCCC--CCCCCccCCcccCcceecCcccc--------cCCCcccCCCChhHHHHHHHHHHHhCCCCeEEEC
Confidence 6799999996542 23689999999999999887542 2468999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
|||.|+.+++. ++++||+||++++.|++++..+...++..|+++.+++..|+++++++++++ |++|++|+|+||+|.+
T Consensus 77 sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~-tklV~l~~p~NptG~~ 154 (390)
T PRK08064 77 SGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVAQNIKPN-TKLFYVETPSNPLLKV 154 (390)
T ss_pred CHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCcEe
Confidence 99999988886 789999999999999998887777778889999999988999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCCCc
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~~l 391 (466)
.|+++|.++||++|+++|+|++|+.+....++++|+|++++|+||+++||+++++|+++.+ ++++++++.++..+|..+
T Consensus 155 ~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~ 234 (390)
T PRK08064 155 TDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVL 234 (390)
T ss_pred ccHHHHHHHHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999887888889999999999999999999889988765 688999999998899999
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+++++|+++++++++..|++++++|+.+++++|+++|.|.+|+||+|++||+|+++++||+|+||||||++++
T Consensus 235 ~~~~a~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~ 307 (390)
T PRK08064 235 GVQDCWLVLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS 307 (390)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975
No 45
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=1e-49 Score=414.46 Aligned_cols=300 Identities=35% Similarity=0.575 Sum_probs=276.0
Q ss_pred ccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCH
Q 012321 155 SLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASG 234 (466)
Q Consensus 155 t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG 234 (466)
..++|++... ..+++++||||+++||.|++.+++.+.+.+...+|.|+|+++|+++.||+++++++|.+.+++++||
T Consensus 11 ~~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG 87 (389)
T PRK05968 11 AALITAHDEG---NAFDAVVPPIFQTSLFTFDSYDEMEDVYAGEKVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFASG 87 (389)
T ss_pred hheeecCCCc---cCCCCccCCccCCcceecCCHHHHHHhhcCCCCCccccCCCChhHHHHHHHHHHHhCCCcEEEECCH
Confidence 3478887653 3478999999999999999999888887766677999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc
Q 012321 235 MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 314 (466)
Q Consensus 235 ~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d 314 (466)
|+|+.+++.+++++||+||++.+.|++++..+...+...|+++.++|..|++++++++ + ++++|++|+|+|+++.+.|
T Consensus 88 ~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~d 165 (389)
T PRK05968 88 MAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKAL-P-GAKLLYLESPTSWVFELQD 165 (389)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhc-c-cCCEEEEECCCCCCCcHHH
Confidence 9999999999999999999999999999888877778889999999998999999998 4 4899999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH-HhCCCchH
Q 012321 315 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGALNP 393 (466)
Q Consensus 315 l~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~-~~G~~ls~ 393 (466)
+++|+++||++|+++|+|++|+.+...+++.+|+|++++|+||+++||+++++|+++++++++++++.... .+|..+++
T Consensus 166 l~~i~~la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~ 245 (389)
T PRK05968 166 VAALAALAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSP 245 (389)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCCh
Confidence 99999999999999999999999887888889999999999999999999889999999999988886554 57888999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 394 NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 394 ~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+.+|+++++|+++..|++++++++++++++|+++|.|++|+||++++|| ++++.|+||||+|++++
T Consensus 246 ~~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~-----~~~~~g~g~~~sf~~~~ 311 (389)
T PRK05968 246 FEAWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHP-----PAGLSGTSGLFSFIFRE 311 (389)
T ss_pred HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCh-----HHhCCCCceEEEEEECC
Confidence 9999999999999999999999999999999999999999999999998 56788999999999973
No 46
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=1e-49 Score=410.95 Aligned_cols=283 Identities=34% Similarity=0.556 Sum_probs=254.1
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|.++|.|...+ ..+++++||||+|+||.|++. +...+|.|+|++||++.+||++|++++|.+.++++
T Consensus 6 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~--------~~~~~~~Y~R~~~p~~~~le~~lA~leg~~~~v~~ 75 (364)
T PRK07269 6 HINTILAQAGIKSD--EATGALVTPLHFSTTYQHPEF--------GQSTGFDYTRTKNPTRAKLEETLAAIESADYALAT 75 (364)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCC--------CCcCCcceeCCCCccHHHHHHHHHHHhCCCeEEEe
Confidence 46799999996542 235789999999999998873 22347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+||++|+.+++ .++++||+||++.+.|+++..++....+..++++.+. .|+++++++++++ ||+|++|+|+||+|.
T Consensus 76 ~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~--~d~~~l~~~i~~~-TklV~lesP~NPtg~ 151 (364)
T PRK07269 76 SSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA--NTEEELIAAIEED-TDIVYIETPTNPLMV 151 (364)
T ss_pred CCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec--CCHHHHHHhcCcC-ceEEEEECCCCCCCe
Confidence 99999999888 5679999999999999998877766555556665543 5899999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|+++||++|+++|+|+||++++.++|+..|+|++++|+||+++||+|+++|++++ +++++++++..+...|..
T Consensus 152 ~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~ 231 (364)
T PRK07269 152 EFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAV 231 (364)
T ss_pred eeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998889999999999999999999999999999887 467888888877788999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++++|+++++|++|+.|++++++|+++++++|++||.|.+|+||++ ||||||++++
T Consensus 232 ~s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~----------------gg~~sf~~~~ 289 (364)
T PRK07269 232 LSPFDSYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGK----------------GGMISFKVAD 289 (364)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCc----------------CcEEEEEECC
Confidence 999999999999999999999999999999999999999999999973 8999999864
No 47
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=8.6e-47 Score=389.45 Aligned_cols=285 Identities=34% Similarity=0.595 Sum_probs=259.4
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|.++|.|...+ ..+++++||||+|+||.+++.+ ...+|.|+|++||+.+.||++|++++|.+.++++
T Consensus 4 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~pt~~~le~~la~l~g~~~~~~~ 73 (366)
T PRK08247 4 TIETKLAQIGNRSD--ERTGTVNPPVYFSTAYRHEGIG--------ESTGFDYSRTGNPTRGVLEQAIADLEGGDQGFAC 73 (366)
T ss_pred CcchhheeCCCCCC--CCCCCccCCcccCcccccCCCC--------CcCCccccCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 47899999996542 2368999999999999988732 2347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+||++|+.+++ .++++||+||++++.|++++..+...++.+|+++.+++..|+++++++++++ |++|++|+|+||+|.
T Consensus 74 ~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~-tklv~le~P~NP~~~ 151 (366)
T PRK08247 74 SSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITPN-TKAIFIETPTNPLMQ 151 (366)
T ss_pred cCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhcccC-ceEEEEECCCCCCCc
Confidence 99999998765 6889999999999999999888877788899999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|+++|+++|+++|+|++|+.++.+.|+..|+|++++|+||+++||+++++|+++++ ++++++++..+...|..
T Consensus 152 ~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~ 231 (366)
T PRK08247 152 ETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAV 231 (366)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999988888888999999999999999999999999986 67888888888888888
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++.+|+++++++++..|++++++|++.++++|+++|+|..|+||+. |||++|++++
T Consensus 232 ~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~----------------gg~~sf~~~~ 289 (366)
T PRK08247 232 LSPFDSWLLIRGMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGR----------------GGMLSFRLQD 289 (366)
T ss_pred CChHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCc----------------CcEEEEEECC
Confidence 999999999999999999999999999999999999999999999973 8899998863
No 48
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.94 E-value=1e-25 Score=238.16 Aligned_cols=212 Identities=24% Similarity=0.310 Sum_probs=180.5
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCC---ccchHHHHHhhcccCCcEEEEeCC---C
Q 012321 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC---YRKTRIFIETVLPKMGITATVIDP---A 283 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~---y~~t~~~~~~~l~~~gi~v~~vd~---~ 283 (466)
+..+.+|+.+++++|++.+++++||++|+.+++ ..+.+||+||+++.. |++++.+ ...++..|+++.+++. .
T Consensus 122 ~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l-~~l~~GdeVIvs~~e~v~~ggs~~i-~~~~~~~G~~~~~v~~~~~~ 199 (454)
T TIGR00474 122 SRYSHVEGLLCELTGAEDALVVNNNAAAVLLAL-NTLAKGKEVIVSRGELVEIGGSFRI-PDVMEQSGAKLVEVGTTNRT 199 (454)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHH-HHhCCcCEEEECCChhhhhcchhhH-HHHHHHcCCEEEEeCCCCCC
Confidence 457899999999999999999999999998888 457899999999877 5566555 3456778999998875 5
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCC--c--ccccHHHHHHHHHhcCCEEEEeCCCC------------CCCccchhccC
Q 012321 284 DMEGLEAALNNNNVSLFFTESPTNPF--L--RCVDVKLVSDLCHKKGAIVCIDGTFA------------TPLNQKALSLG 347 (466)
Q Consensus 284 D~e~Le~ai~~~~tklV~lesPsNPt--G--~v~dl~~I~ela~~~gillIvD~t~a------------~~~~~~pl~~g 347 (466)
++++++++++++ |++|++++++|++ | .+.|+++|+++||++|+++++|++.+ .+..+++.++|
T Consensus 200 ~l~dle~aI~~~-T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~G 278 (454)
T TIGR00474 200 HLKDYEDAITEN-TALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAG 278 (454)
T ss_pred CHHHHHHhcCcC-CEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcC
Confidence 789999999885 9999999999995 5 58899999999999999999999732 23345778899
Q ss_pred CcEEEeccccccccccCceEEEEEeChHHHHHH---------H-------HHHHHhCCCchHHHHHHHHHhhHHHHHHHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI---------R-------NLHHVLGGALNPNAAYLIIRGMKTLHLRVQ 411 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l---------~-------~~~~~~G~~ls~~~A~l~lrgL~tl~~R~e 411 (466)
+|++++|.+|+++|| .+|++++++++++++ + .+...+|..++++.+|+.++++++|..|++
T Consensus 279 aDiv~fSg~K~LgGp---~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~ 355 (454)
T TIGR00474 279 VDLVTFSGDKLLGGP---QAGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPE 355 (454)
T ss_pred CCEEEecCccccCCC---eEEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHH
Confidence 999999999999998 389999998887543 2 233456777889999999999999999999
Q ss_pred HHHHHHHHHHHHHHcC
Q 012321 412 QQNSTALRMAKILEAH 427 (466)
Q Consensus 412 ~~~~na~~La~~L~~~ 427 (466)
++++++++++++|++.
T Consensus 356 ~~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 356 ELRARAERLAKRLKAA 371 (454)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999875
No 49
>PRK04311 selenocysteine synthase; Provisional
Probab=99.93 E-value=1.7e-24 Score=229.37 Aligned_cols=213 Identities=23% Similarity=0.321 Sum_probs=172.3
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCc---cchHHHHHhhcccCCcEEEEeCC---C
Q 012321 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCY---RKTRIFIETVLPKMGITATVIDP---A 283 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y---~~t~~~~~~~l~~~gi~v~~vd~---~ 283 (466)
+..+.+|+.+++++|++++++++||++|+.+++.+ +.+||+||+++..| ++++.+ ...++..|+++.+++. .
T Consensus 127 ~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e~~~~ggs~~i-~~~~~~~G~~l~~v~~~~~t 204 (464)
T PRK04311 127 SRDRALAALLCALTGAEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGELVEIGGAFRI-PDVMRQAGARLVEVGTTNRT 204 (464)
T ss_pred hHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchhhhhcCcchhh-HHHHHHCCcEEEEECCCCCC
Confidence 45679999999999999999999999999888854 68999999998644 334443 3445678999888874 4
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCC----cccccHHHHHHHHHhcCCEEEEeCC---------C---CCCCccchhccC
Q 012321 284 DMEGLEAALNNNNVSLFFTESPTNPF----LRCVDVKLVSDLCHKKGAIVCIDGT---------F---ATPLNQKALSLG 347 (466)
Q Consensus 284 D~e~Le~ai~~~~tklV~lesPsNPt----G~v~dl~~I~ela~~~gillIvD~t---------~---a~~~~~~pl~~g 347 (466)
++++++++|+++ |++|++++++|++ +...|+++|+++||++|+++++|+. | ..+..++++++|
T Consensus 205 ~~~dle~aI~~~-TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~G 283 (464)
T PRK04311 205 HLRDYEQAINEN-TALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAG 283 (464)
T ss_pred CHHHHHHhcCcc-CeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcC
Confidence 789999999875 9999999999983 4678999999999999999999994 3 234446778899
Q ss_pred CcEEEeccccccccccCceEEEEEeChHHHHHHHH--HHHHh---CCCchH-----------HHHHHHHHhhHHHHHHHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHVL---GGALNP-----------NAAYLIIRGMKTLHLRVQ 411 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~--~~~~~---G~~ls~-----------~~A~l~lrgL~tl~~R~e 411 (466)
+|++++|.+|+++||. +|++++++++++++++ +.+.+ +.++.+ ..+|..++++++|..|++
T Consensus 284 aDiv~fSg~K~LgGp~---~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~ 360 (464)
T PRK04311 284 VDLVTFSGDKLLGGPQ---AGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPE 360 (464)
T ss_pred CcEEEecCcccccCCc---eEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHH
Confidence 9999999999999994 8999999999988773 11111 333344 444555667788999999
Q ss_pred HHHHHHHHHHHHHHcCC
Q 012321 412 QQNSTALRMAKILEAHP 428 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p 428 (466)
++++++++++++|++++
T Consensus 361 ~~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 361 ELRARAERLAAALKAAL 377 (464)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999986
No 50
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=2.2e-23 Score=216.57 Aligned_cols=251 Identities=13% Similarity=0.180 Sum_probs=188.9
Q ss_pred CccccCCCccCChHHHHHHHhccc---C-CCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCE
Q 012321 176 PVVNTSAYFFKKTAELIDFKEKRR---A-SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGH 251 (466)
Q Consensus 176 Pi~~sst~~~~~~~~~~~~~~~~~---~-~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~ 251 (466)
||.+.+.....-.+.+.++..... . .|.+.+...|..+++|+.+|+++|.++++++++|++++.+++.+++++||+
T Consensus 25 ~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~~gd~ 104 (387)
T PRK09331 25 PIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCKKGDY 104 (387)
T ss_pred hhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcCCCCE
Confidence 555555554444445555443211 1 445666678899999999999999999998888889999999999999999
Q ss_pred EEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccCC------CceEEEEeCCCCCCcccccHHHH
Q 012321 252 IVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNN------NVSLFFTESPTNPFLRCVDVKLV 318 (466)
Q Consensus 252 VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-------~D~e~Le~ai~~~------~tklV~lesPsNPtG~v~dl~~I 318 (466)
|+++.+.|.+.+.. +...|+++.+++. .|++++++++++. ++++|++++|+|++|.+.|+++|
T Consensus 105 Vlv~~~~h~s~~~~----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I 180 (387)
T PRK09331 105 VVLDGLAHYTSYVA----AERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKV 180 (387)
T ss_pred EEECCCchHHHHHH----HHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHH
Confidence 99999999886643 3456888877754 4789999988631 48999999999999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCCCC-ccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH--------HhCC
Q 012321 319 SDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGG 389 (466)
Q Consensus 319 ~ela~~~gillIvD~t~a~~~-~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--------~~G~ 389 (466)
.++||++|+++++|++++.+. ......+|+|+++.|++|++++++ .+|+++++++++++++.... .+|.
T Consensus 181 ~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~--~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (387)
T PRK09331 181 AKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASA--PSGVLATTEEYADKVFRTSRKFGVKEVELLGC 258 (387)
T ss_pred HHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCC--CEEEEEECHHHHhhcccccCCCcccceeeece
Confidence 999999999999999998764 344556789999999999998765 47899999998887765432 1333
Q ss_pred CchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEE
Q 012321 390 ALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 390 ~ls~~~A~l~---lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~ 432 (466)
++.+..++.+ +..+.....+++++.++++++.+.|+++++++.
T Consensus 259 ~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~ 304 (387)
T PRK09331 259 TLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQ 304 (387)
T ss_pred ecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 3322222222 222333334567778899999999999977643
No 51
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=7.2e-23 Score=213.42 Aligned_cols=220 Identities=20% Similarity=0.276 Sum_probs=162.9
Q ss_pred hHHHHHHHHHhhhCC----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 211 TTVVVEEKMSALEGA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~----e~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
.++++.+++.+.+|. ++.+++++| ++|+..++++++.+||+||+++|.|......+ ...|.++..++.
T Consensus 70 LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~----~~~gg~~v~v~l~~~ 145 (393)
T COG0436 70 LREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAV----KLAGGKPVPVPLDEE 145 (393)
T ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHH----HhcCCEEEEEeCCcC
Confidence 344455555555552 343555555 59999999999999999999999999866443 334555555442
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----chhccC--
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSLG-- 347 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~pl~~g-- 347 (466)
.|+++|++++++ +||+|++++||||||.+++ +++|+++|++||+++|.||+|...... ..+...
T Consensus 146 ~~~f~~d~~~l~~~i~~-ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~ 224 (393)
T COG0436 146 ENGFKPDLEDLEAAITP-KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGA 224 (393)
T ss_pred ccCCcCCHHHHHhhcCc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCC
Confidence 369999999998 5999999999999999986 788999999999999999998654332 122221
Q ss_pred --CcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCCCchHHHHHH---HHHhh---HHHHHHHHHHHHHHH
Q 012321 348 --ADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYL---IIRGM---KTLHLRVQQQNSTAL 418 (466)
Q Consensus 348 --aDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~~ls~~~A~l---~lrgL---~tl~~R~e~~~~na~ 418 (466)
.-|+++|+||.++.+|++ .||++++ +++++.+.+++.....+.+....+. ++.+- +.+....+...++++
T Consensus 225 ~~~~i~i~s~SK~~~mtGwR-vG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd 303 (393)
T COG0436 225 RDRTITINSFSKTYGMTGWR-IGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRD 303 (393)
T ss_pred cceEEEEecccccccccccc-eeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHH
Confidence 248999999999999975 7899988 8888888877776665555444443 34433 234444467889999
Q ss_pred HHHHHHHcCCCcEEEeCC
Q 012321 419 RMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 419 ~La~~L~~~p~V~~V~~P 436 (466)
.+.+.|.+.+.+..+..|
T Consensus 304 ~l~~~l~~~~g~~~~~~p 321 (393)
T COG0436 304 LLVEALNEIGGLSVVKPP 321 (393)
T ss_pred HHHHHHHhcCCeeeccCC
Confidence 999999999877665545
No 52
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.92 E-value=5.5e-23 Score=211.10 Aligned_cols=223 Identities=13% Similarity=0.224 Sum_probs=171.0
Q ss_pred cCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC--
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-- 281 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd-- 281 (466)
.....+|...++++++++++|.++++++++|++++..++.+++++||+|+++.+.|.+.+.. +...|+++..++
T Consensus 38 ~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~ 113 (361)
T cd06452 38 LDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYVA----AERAGLNVREVPNT 113 (361)
T ss_pred cccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHHH----HHhcCCEEEEEecC
Confidence 34445789999999999999998777777777999999999999999999999988876532 455677777764
Q ss_pred -----CCCHHHHHHhccC------CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCc
Q 012321 282 -----PADMEGLEAALNN------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGAD 349 (466)
Q Consensus 282 -----~~D~e~Le~ai~~------~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaD 349 (466)
..|++++++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+.. .....+|+|
T Consensus 114 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d 193 (361)
T cd06452 114 GHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGAD 193 (361)
T ss_pred CCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCC
Confidence 2478999988862 2489999999999999999999999999999999999999986543 455567899
Q ss_pred EEEeccccccccccCceEEEEEeChHHHHHHHHHHHH--------hCCCchHHHHHHHHHhhHHHH---HHHHHHHHHHH
Q 012321 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTAL 418 (466)
Q Consensus 350 ivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~--------~G~~ls~~~A~l~lrgL~tl~---~R~e~~~~na~ 418 (466)
+++.|+||++++++ .+|++++++++++++++.+.. .+.+.....++.++..++.+. .++++..++++
T Consensus 194 ~~~~s~~K~l~~~~--~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 271 (361)
T cd06452 194 FIVGSGHKSMAASA--PIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKAR 271 (361)
T ss_pred EEEecCCccccCCC--CeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998765 578999999999888665432 122222222333333443332 33445556778
Q ss_pred HHHHHHHcCCCcEE
Q 012321 419 RMAKILEAHPKVKR 432 (466)
Q Consensus 419 ~La~~L~~~p~V~~ 432 (466)
++.+.|+++|+++.
T Consensus 272 ~l~~~L~~l~g~~v 285 (361)
T cd06452 272 WFVAELEKIEGIKQ 285 (361)
T ss_pred HHHHHHhcCCCeEE
Confidence 99999999987643
No 53
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.90 E-value=2.6e-22 Score=209.25 Aligned_cols=212 Identities=16% Similarity=0.175 Sum_probs=165.0
Q ss_pred cCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~ 283 (466)
|+|.. +..+||+++|+++|.+++++++||+.|+..++.+++++||+|+++++.|+++...+ .+. +.++.+++..
T Consensus 39 yg~~~--~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~--~l~--~~~~~~~~~~ 112 (392)
T PLN03227 39 YGTID--AHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLVGV--SLS--RANVRWFRHN 112 (392)
T ss_pred cCChH--HHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH--HHc--CCeEEEeCCC
Confidence 66654 79999999999999999999999999988999999999999999999999876543 122 3466666666
Q ss_pred CHHHHHH---hccC----------CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---------
Q 012321 284 DMEGLEA---ALNN----------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--------- 341 (466)
Q Consensus 284 D~e~Le~---ai~~----------~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~--------- 341 (466)
|.+++++ .+.+ .++++|++|+|.|++|.+.|+++|.++|+++|+++|+||+++.+...
T Consensus 113 d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~ 192 (392)
T PLN03227 113 DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEH 192 (392)
T ss_pred CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHH
Confidence 6555544 4421 24899999999999999999999999999999999999998754332
Q ss_pred ---chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH--HHHhCCCchHHHHHHHHHhhHH---HHHHHHHH
Q 012321 342 ---KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLGGALNPNAAYLIIRGMKT---LHLRVQQQ 413 (466)
Q Consensus 342 ---~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~--~~~~G~~ls~~~A~l~lrgL~t---l~~R~e~~ 413 (466)
.| ..++|+++.|++|+++. ++|++++++++++.++.. ...+++.++|..++.++..++. .+.++++.
T Consensus 193 ~g~~p-~~~~Div~~slsk~~g~----~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l 267 (392)
T PLN03227 193 AGLKP-MVHAEIVTFSLENAFGS----VGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRL 267 (392)
T ss_pred cCCCC-CCCceEEEeechhhhhc----cCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 12 23679999999999874 468889999888776543 2345666677766665544433 34677888
Q ss_pred HHHHHHHHHHHHc
Q 012321 414 NSTALRMAKILEA 426 (466)
Q Consensus 414 ~~na~~La~~L~~ 426 (466)
.++.+++.+.|++
T Consensus 268 ~~~~~~l~~~L~~ 280 (392)
T PLN03227 268 HDSIANLYSTLTN 280 (392)
T ss_pred HHHHHHHHHHHHh
Confidence 8999999999974
No 54
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.90 E-value=9.8e-22 Score=205.49 Aligned_cols=217 Identities=17% Similarity=0.249 Sum_probs=159.9
Q ss_pred CchhHHHHHHHHHhhhCC---C-cEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-
Q 012321 208 GNPTTVVVEEKMSALEGA---E-STVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~---e-~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd- 281 (466)
..+.++.+.+++++.+|. + +.|++++| ++++..++.+++++||+|++++|+|+.....+ +..|.++..++
T Consensus 80 ~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~----~~~g~~v~~v~~ 155 (405)
T PRK06207 80 DADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLV----EFFEGEMVPVQL 155 (405)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHH----HHcCCEEEEEec
Confidence 345566777777777774 2 45555555 59999999999999999999999998865433 34555554443
Q ss_pred ---------CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chh-
Q 012321 282 ---------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL- 344 (466)
Q Consensus 282 ---------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl- 344 (466)
..|+++|+++++++ +++|++++|+||||.+++ +++|+++|+++|+++|+||+|....+. .++
T Consensus 156 ~~~~~~~~~~~d~~~l~~~~~~~-~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~ 234 (405)
T PRK06207 156 DYLSADKRAGLDLDQLEEAFKAG-VRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLR 234 (405)
T ss_pred cccCcccCCCcCHHHHHHhhhhc-CeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchh
Confidence 23789999998774 899999999999999996 678889999999999999998764321 111
Q ss_pred cc----CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHH
Q 012321 345 SL----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (466)
Q Consensus 345 ~~----gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~n 416 (466)
.+ ..-+++.|+||.++.+| .+.||++++++++++++..........+.+....+...+ ..+..+++++.++
T Consensus 235 ~~~~~~~~vi~i~SfSK~~~lpG-lRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 313 (405)
T PRK06207 235 ALPIDPENVITIMGPSKTESLSG-YRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAI 313 (405)
T ss_pred cCCCCcCcEEEEecchhhccCcc-cceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 11 22389999999999776 468999999999999988776655444443333333222 3466777888888
Q ss_pred HHHHHHHHHcCCCc
Q 012321 417 ALRMAKILEAHPKV 430 (466)
Q Consensus 417 a~~La~~L~~~p~V 430 (466)
++.+.+.|++++.+
T Consensus 314 r~~l~~~L~~~~~~ 327 (405)
T PRK06207 314 RDDLLRVLRGVEGV 327 (405)
T ss_pred HHHHHHHHhcCCCc
Confidence 88899999887654
No 55
>PRK07324 transaminase; Validated
Probab=99.89 E-value=1.6e-21 Score=201.60 Aligned_cols=224 Identities=16% Similarity=0.197 Sum_probs=162.8
Q ss_pred CccCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEE
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~ 278 (466)
+.|+.. .....|++.++++++. ++.++++++++|+.+++.+++.+||+|+++.|.|..... .++..|.++.
T Consensus 56 ~~Y~~~--~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~~g~~v~ 129 (373)
T PRK07324 56 LTYGWI--EGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYD----IPESLGAEVD 129 (373)
T ss_pred ccCCCC--CCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH----HHHHcCCEEE
Confidence 445532 2345899999998753 445555555699999999999999999999999987543 3445677776
Q ss_pred EeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----hh
Q 012321 279 VIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL 344 (466)
Q Consensus 279 ~vd~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~----pl 344 (466)
.++. .|++++++.+++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|....... ..
T Consensus 130 ~v~~~~~~~~~~d~~~l~~~~~~-~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~ 208 (373)
T PRK07324 130 YWQLKEENGWLPDLDELRRLVRP-NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIA 208 (373)
T ss_pred EEecccccCCCCCHHHHHHhCCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChh
Confidence 6642 378999998877 4999999999999999998 8899999999999999999986532211 11
Q ss_pred cc-CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH----HHHHHHHHHHHHHH
Q 012321 345 SL-GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALR 419 (466)
Q Consensus 345 ~~-gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t----l~~R~e~~~~na~~ 419 (466)
.. ...|++.|+||.++.+|. +.||+++++++++++++.+.....+.+.+..+++...++. +....+...++.+.
T Consensus 209 ~~~~~~I~~~s~SK~~~~~G~-RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~ 287 (373)
T PRK07324 209 DLYEKGISTNSMSKTYSLPGI-RVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAI 287 (373)
T ss_pred hccCCEEEEecchhhcCCccc-eeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 11 234889999999998774 5799999999999998877654444444444444444432 23333445667888
Q ss_pred HHHHHHcCCCcEEE
Q 012321 420 MAKILEAHPKVKRV 433 (466)
Q Consensus 420 La~~L~~~p~V~~V 433 (466)
+.++|++++.+..+
T Consensus 288 l~~~l~~~~~~~~~ 301 (373)
T PRK07324 288 LDEWVAKEPRVSYV 301 (373)
T ss_pred HHHHHhcCCCceEE
Confidence 89999988766543
No 56
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.3e-21 Score=203.18 Aligned_cols=217 Identities=17% Similarity=0.188 Sum_probs=164.6
Q ss_pred CchhHHHHHHHHHhhhCC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 208 GNPTTVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~----e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
..+.++.+++.+++..|. ++.+++++|+ +++..++.+++.+||+|++++|+|...... ++..|+++..++.
T Consensus 67 ~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 142 (389)
T PRK05957 67 IPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMA----ITMAGCQPILVPT 142 (389)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHH----HHhcCCEEEEeec
Confidence 346688889999888874 4556666665 899888888999999999999999875432 3456777776642
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----chhc----
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS---- 345 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~pl~---- 345 (466)
.|+++++++++++ +++|++.+|+||||.+++ +++|+++|+++|+++|+|++|...... .+..
T Consensus 143 ~~~~~~d~~~l~~~i~~~-~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~ 221 (389)
T PRK05957 143 DDNYQLQPEAIEQAITPK-TRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGS 221 (389)
T ss_pred CCCCCcCHHHHHHhcCcC-ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCc
Confidence 4789999999874 999999999999999997 888999999999999999998643321 1111
Q ss_pred cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHH
Q 012321 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 346 ~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~~La 421 (466)
....|++.|+||.++.+|. +.||+++++++++++.......+.+.+......+...+ ..+...++++.++++.+.
T Consensus 222 ~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~ 300 (389)
T PRK05957 222 GNHTISLYSLSKAYGFASW-RIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILL 300 (389)
T ss_pred cCcEEEEecchhhccCccc-eeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 1234889999999988874 58999999999999988776555554544444443333 235556667788888899
Q ss_pred HHHHcCCCc
Q 012321 422 KILEAHPKV 430 (466)
Q Consensus 422 ~~L~~~p~V 430 (466)
+.|++++.+
T Consensus 301 ~~L~~~~~~ 309 (389)
T PRK05957 301 KSLGQLQDR 309 (389)
T ss_pred HHHHhcCCC
Confidence 999887653
No 57
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.3e-21 Score=200.38 Aligned_cols=221 Identities=15% Similarity=0.250 Sum_probs=165.4
Q ss_pred cCCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
+.+|+++....|++.++++++. ++.+++++|+ +++..++.+++++||+|++++|.|..... .++..|.++..++
T Consensus 53 ~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~ 128 (351)
T PRK14807 53 VNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSV----YSKIAGAVEIPVK 128 (351)
T ss_pred ccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH----HHHHcCCeEEEee
Confidence 4556666778999999999986 4566777776 88999999999999999999999986432 3344566665554
Q ss_pred -----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccch---h-ccCCcEEE
Q 012321 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---L-SLGADLVL 352 (466)
Q Consensus 282 -----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~p---l-~~gaDivv 352 (466)
..|++++++++++.++++|++++|+||||.+.+.+++.+++++++.++|+|++|........ + .....+++
T Consensus 129 ~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~ 208 (351)
T PRK14807 129 LKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVL 208 (351)
T ss_pred cCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEE
Confidence 24789999999754599999999999999999999999999998889999999865321111 1 12345999
Q ss_pred eccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012321 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL--~tl~~R~e~~~~na~~La~~L~~~p~V 430 (466)
.|+||.++.+| ++.||+++++++++.++..+... ..+.+..+.+...+ ..+..+++...++++.+.+.|++.+++
T Consensus 209 ~S~SK~~~~~G-lRiG~~v~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~ 285 (351)
T PRK14807 209 RTLSKAFGLAG-LRVGYAVANENILKYLNLVKSPY--NINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGI 285 (351)
T ss_pred ecchHhcccch-hceeeeecCHHHHHHHHHccCCC--CcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999998777 46799999999999887655432 23444444333333 245556667777888899999877765
Q ss_pred E
Q 012321 431 K 431 (466)
Q Consensus 431 ~ 431 (466)
.
T Consensus 286 ~ 286 (351)
T PRK14807 286 K 286 (351)
T ss_pred E
Confidence 3
No 58
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.89 E-value=2e-21 Score=200.62 Aligned_cols=214 Identities=13% Similarity=0.142 Sum_probs=163.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~----- 283 (466)
+|....+++.+|+++|.+.++++++|++++..++.+++++||+|+++.+.|.+.+. .++..|+++..++..
T Consensus 50 ~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~----~~~~~g~~~~~~~~~~~~~~ 125 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYV----AAERAGLNVKEVPHTGHPEY 125 (370)
T ss_pred chHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHH----HHHHcCCEEEEEecCCcccC
Confidence 45788889999999999999999999999999999999999999999999877653 245568887777643
Q ss_pred --CHHHHHHhccC------CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEec
Q 012321 284 --DMEGLEAALNN------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (466)
Q Consensus 284 --D~e~Le~ai~~------~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S 354 (466)
|+++|++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+.. ......+.|+++.|
T Consensus 126 ~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s 205 (370)
T TIGR02539 126 KVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGS 205 (370)
T ss_pred CcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEee
Confidence 89999998863 2489999999999999999999999999999999999999987642 34445678999999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHHHHHhC--------CCc---hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--------GAL---NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G--------~~l---s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~ 423 (466)
++|++++++ ..|++++++++++.++.....+. ... ....++.++..+...-.++.+..++++++.+.
T Consensus 206 ~sK~~~~~g--~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~ 283 (370)
T TIGR02539 206 GHKSMAASG--PCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAE 283 (370)
T ss_pred CcccccCCC--CEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998755 36899999999998876554221 111 12222222222112112334445667789999
Q ss_pred HHcCC
Q 012321 424 LEAHP 428 (466)
Q Consensus 424 L~~~p 428 (466)
|++.+
T Consensus 284 L~~~g 288 (370)
T TIGR02539 284 LEDIG 288 (370)
T ss_pred HHhCC
Confidence 98875
No 59
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.89 E-value=5.4e-22 Score=204.10 Aligned_cols=224 Identities=17% Similarity=0.241 Sum_probs=180.0
Q ss_pred ccCCCCchhHHHHHHHHHhhhC-C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 203 EYGRYGNPTTVVVEEKMSALEG-A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 203 ~Y~R~~~p~~~~Lee~lA~l~g-~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
.+.||+++...+|++++++++| . .+.|+.++|+ +.|..++++++.+||.|++..|+|.... ..++..|+++..
T Consensus 50 ~~~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~----~~a~~~g~~~~~ 125 (356)
T COG0079 50 KLNRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYE----IAAQLAGAEVVK 125 (356)
T ss_pred hhccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHH----HHHHhcCCeEEE
Confidence 5889999999999999999999 4 4788888888 8999999999999999999999998744 334556877777
Q ss_pred eCC----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCccchhc----cCCc
Q 012321 280 IDP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALS----LGAD 349 (466)
Q Consensus 280 vd~----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~--gillIvD~t~a~~~~~~pl~----~gaD 349 (466)
++. .|++.+.+++++ ++++||++|||||||...+.++|.+++... +.+||+||+|..+....... ...-
T Consensus 126 v~~~~~~~d~~~~~~~~~~-~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nl 204 (356)
T COG0079 126 VPLKEFRLDLDAILAAIRD-KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNL 204 (356)
T ss_pred ecccccccCHHHHHHhhhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCE
Confidence 764 678999999987 499999999999999999888888877653 88999999987655422222 2224
Q ss_pred EEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN-AAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 350 ivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~-~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p 428 (466)
+|+.|+||.||-.| ++.|++++++++++.+++.+..+..+.... .+..+++.-+.+..+.++..+.++++.+.|++++
T Consensus 205 ivlRTfSKa~gLAG-lRlGy~ia~~~~i~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~ 283 (356)
T COG0079 205 IVLRTFSKAFGLAG-LRVGYAIANPELIAALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG 283 (356)
T ss_pred EEEEecHHhhhcch-hceeeccCCHHHHHHHHHhcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 89999999999888 568999999999999999998776443332 3333344446778888899999999999999987
Q ss_pred CcEEE
Q 012321 429 KVKRV 433 (466)
Q Consensus 429 ~V~~V 433 (466)
+..|
T Consensus 284 -~~~v 287 (356)
T COG0079 284 -LFGV 287 (356)
T ss_pred -CCee
Confidence 4433
No 60
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=3.7e-21 Score=200.99 Aligned_cols=247 Identities=19% Similarity=0.221 Sum_probs=184.2
Q ss_pred CccCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHh---ccCCCEEEEcCCCccchHHHHHhhcccCCc
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g~e--~~v~~~SG~-aAi~~al~al---l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi 275 (466)
|..+.......++.|++++++.|++ +.|+++.|+ ++++++..++ +++||+||+++..|++....+..+.++.|+
T Consensus 58 ~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga 137 (405)
T COG0520 58 HTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGA 137 (405)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCc
Confidence 3344344456788899999999974 567666666 9999999988 699999999999999988777777778899
Q ss_pred EEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCc
Q 012321 276 TATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGAD 349 (466)
Q Consensus 276 ~v~~vd~~-----D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaD 349 (466)
++++++.. +.++++..++++ ||+|.+...+|.||.+.|+++|+++||++|++++||.+++.+.. .+.-++|+|
T Consensus 138 ~v~~i~~~~~g~~~~~~~~~~i~~~-Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~D 216 (405)
T COG0520 138 KVRVIPLDDDGLLDLDALEKLITPK-TKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCD 216 (405)
T ss_pred EEEEEecCCCCCcCHHHHHHhcCCC-ceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCC
Confidence 88887632 589999988875 99999999999999999999999999999999999999887754 455578999
Q ss_pred EEEeccccccccccCceEEEEEeChHHHHHHHHHHH----------------------HhCCCchHHHHHHHHHhhHHH-
Q 012321 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH----------------------VLGGALNPNAAYLIIRGMKTL- 406 (466)
Q Consensus 350 ivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~----------------------~~G~~ls~~~A~l~lrgL~tl- 406 (466)
++++|.|||+.||. ..|++++++++++.+.-... .-.++.+....+.+-..++.+
T Consensus 217 f~afsgHKwl~gP~--GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~ 294 (405)
T COG0520 217 FLAFSGHKWLLGPT--GIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLL 294 (405)
T ss_pred EEEEcccccccCCC--ceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHH
Confidence 99999999888885 36999999999888732110 001122222222222222222
Q ss_pred ----HHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEecee
Q 012321 407 ----HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCVF 465 (466)
Q Consensus 407 ----~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~~ 465 (466)
....+..++..+++.+.|+++|.|+. +.|.. . ..+++++|.+++.
T Consensus 295 ~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i-~g~~~-~------------~r~~~vsF~v~~~ 343 (405)
T COG0520 295 EIGMEAIEAHERELTEYLLEGLSELPGVEI-YGPPD-A------------DRGGIVSFNVKGI 343 (405)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecCCc-c------------cCceEEEEEeCCC
Confidence 22334456678888999999999854 44432 1 1468888888764
No 61
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.89 E-value=3.4e-21 Score=195.42 Aligned_cols=213 Identities=21% Similarity=0.255 Sum_probs=167.5
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHH
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e 286 (466)
..++..+.+++.+++++|.++.+++++|++++..++.+++++||+|+++++.|+..... +...|+++..++..|.+
T Consensus 43 ~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~ 118 (349)
T cd06454 43 GTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDG----IRLSGAKKRIFKHNDME 118 (349)
T ss_pred CCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHH----HHHcCCceEEecCCCHH
Confidence 35788999999999999998899999999999988888899999999999999875533 34468888777777888
Q ss_pred HHHHhccC----CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---------chhccCCcEEEe
Q 012321 287 GLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLH 353 (466)
Q Consensus 287 ~Le~ai~~----~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~---------~pl~~gaDivv~ 353 (466)
++++.+++ .++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+... .....+.|+++.
T Consensus 119 ~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~ 198 (349)
T cd06454 119 DLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMG 198 (349)
T ss_pred HHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEe
Confidence 88888864 34799999999999999999999999999999999999998643221 112357899999
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHHH--hCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~--~G~~ls~~~A~l~lrgL~tl---~~R~e~~~~na~~La~~L~~~ 427 (466)
|++|++++. +|+++++++++++++..... .+...++.....+...++.+ ..+.++..++++.+.+.|+++
T Consensus 199 s~sK~~~~~----gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 273 (349)
T cd06454 199 TLGKAFGAV----GGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL 273 (349)
T ss_pred echhhhccc----CCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Confidence 999999874 48888999888887654432 23345555444444444443 456677888888998988875
No 62
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.89 E-value=3.5e-21 Score=200.57 Aligned_cols=218 Identities=13% Similarity=0.124 Sum_probs=156.8
Q ss_pred CCccCCCCchhHHHHHHHHHhhh----CC---C-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcc
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALE----GA---E-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP 271 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~----g~---e-~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~ 271 (466)
.|.|.. +....|++.|++++ |. + +.|++++|+ +++..++.+++++||+|++++|+|+..... +.
T Consensus 63 ~~~y~~---~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~----~~ 135 (399)
T PRK07681 63 SYGYTL---SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETG----IQ 135 (399)
T ss_pred cCCCCC---CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHH----HH
Confidence 355542 23445556655554 32 2 566666666 899999999999999999999999886533 44
Q ss_pred cCCcEEEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc
Q 012321 272 KMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ 341 (466)
Q Consensus 272 ~~gi~v~~vd~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~ 341 (466)
..|+++..++. .|++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 136 ~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~ 214 (399)
T PRK07681 136 MAGATSYYMPLKKENDFLPDLELIPEEIAD-KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFD 214 (399)
T ss_pred hcCCEEEEEecCCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeC
Confidence 56777766542 268899888876 4999999999999999997 678888999999999999998753321
Q ss_pred c----h-hc----cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHH
Q 012321 342 K----A-LS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHL 408 (466)
Q Consensus 342 ~----p-l~----~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~ 408 (466)
. + .. ....|++.|+||.++.+| .+.||++++++++++++..+...+...+....+.+...+ +.+..
T Consensus 215 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 293 (399)
T PRK07681 215 GNKPISFLSVPGAKEVGVEINSLSKSYSLAG-SRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEK 293 (399)
T ss_pred CCCCCChhhCCCCcccEEEEeecccccCCcc-ceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHH
Confidence 1 1 11 123588999999998777 468999999999999988776544444444333333322 34455
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q 012321 409 RVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 409 R~e~~~~na~~La~~L~~~ 427 (466)
+.+...++.+.+.+.|+++
T Consensus 294 ~~~~~~~~~~~l~~~L~~~ 312 (399)
T PRK07681 294 NRGIYQERRDTLVDGFRTF 312 (399)
T ss_pred HHHHHHHHHHHHHHHHHHC
Confidence 5566677888888999876
No 63
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.88 E-value=3.7e-21 Score=201.63 Aligned_cols=212 Identities=15% Similarity=0.145 Sum_probs=155.8
Q ss_pred hhHHHHHHHHHhhh----CC-----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 210 PTTVVVEEKMSALE----GA-----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 210 p~~~~Lee~lA~l~----g~-----e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
.....|++.+++++ |. ++.|++++|+ +++..++.+++++||+|++++|.|+..... ++..|.++..
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~----~~~~g~~v~~ 156 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTH----TKYYGGEVYN 156 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHH----HHHcCCEEEE
Confidence 44566777777664 42 2368788887 899999999999999999999999886543 3446777666
Q ss_pred eCC-------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-c--hh--
Q 012321 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-K--AL-- 344 (466)
Q Consensus 280 vd~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-~--pl-- 344 (466)
++. .|++++++++.+ ++++|++++|+||||.+++ +++|.++|+++|++||+||+|...... . +.
T Consensus 157 v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~ 235 (410)
T PRK06290 157 LPLLEENNFLPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLS 235 (410)
T ss_pred EecCCCcCCcCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhc
Confidence 542 278889888876 4999999999999999997 578888899999999999998754221 1 11
Q ss_pred ---ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHH
Q 012321 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTAL 418 (466)
Q Consensus 345 ---~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~---lrgL~tl~~R~e~~~~na~ 418 (466)
..+.+|++.|+||.++.+| .+.||+++++++++.+...+.....+.+......+ +...+.+....++..++++
T Consensus 236 ~~~~~~~~I~i~SfSK~~g~~G-lRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~ 314 (410)
T PRK06290 236 VPGAKEVGVEIHSLSKAYNMTG-WRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLD 314 (410)
T ss_pred CCCccccEEEEeechhhcCCch-hheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Confidence 1235699999999998777 46899999999999988776655444332222222 3332345555666778888
Q ss_pred HHHHHHHcC
Q 012321 419 RMAKILEAH 427 (466)
Q Consensus 419 ~La~~L~~~ 427 (466)
.+.+.|+++
T Consensus 315 ~l~~~L~~~ 323 (410)
T PRK06290 315 KLVKILNEV 323 (410)
T ss_pred HHHHHHHhC
Confidence 899999876
No 64
>PLN02721 threonine aldolase
Probab=99.88 E-value=1.1e-20 Score=192.09 Aligned_cols=220 Identities=20% Similarity=0.279 Sum_probs=165.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc-CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~-pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
.+|...+||+.+++++|.+..+++++|++++..++.+++. +||+|++++++|...+... ..+...|+++..++.
T Consensus 38 ~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 116 (353)
T PLN02721 38 YDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENG-GISTLGGVHPRTVKNNEDG 116 (353)
T ss_pred CCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhccc-chhhhcCceeEecCCCcCC
Confidence 4677899999999999998899999999888778877777 9999999999986544210 123456787776652
Q ss_pred -CCHHHHHHhccC------CCceEEEEeCC-CCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCC------ccchhc
Q 012321 283 -ADMEGLEAALNN------NNVSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL------NQKALS 345 (466)
Q Consensus 283 -~D~e~Le~ai~~------~~tklV~lesP-sNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~------~~~pl~ 345 (466)
.|++++++++++ .++++|+++++ +||+|.+.| +++|.++|+++|+++|+|+++.... ....+.
T Consensus 117 ~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~ 196 (353)
T PLN02721 117 TMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLV 196 (353)
T ss_pred CcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHh
Confidence 489999999972 24899999885 678999887 6899999999999999999864321 112223
Q ss_pred cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchH--HHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 012321 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP--NAAYLIIRGMKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 346 ~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~--~~A~l~lrgL~tl~~R~e~~~~na~~La~~ 423 (466)
.++|.++.|+||+++++ +||++++++++++.+...+...+..+.. ..+...+.+++....++++..++++.+.+.
T Consensus 197 ~~~d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 273 (353)
T PLN02721 197 KAADSVSVCLSKGLGAP---VGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEG 273 (353)
T ss_pred hhCCEEEEecccccCCc---eeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999975 3566788999998887776655544322 233344456666555677777888899999
Q ss_pred HHcCCCcE
Q 012321 424 LEAHPKVK 431 (466)
Q Consensus 424 L~~~p~V~ 431 (466)
|++++++.
T Consensus 274 L~~~~~~~ 281 (353)
T PLN02721 274 LNQIKGLR 281 (353)
T ss_pred HHhCCCcE
Confidence 99887764
No 65
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.88 E-value=2.2e-21 Score=196.96 Aligned_cols=220 Identities=19% Similarity=0.215 Sum_probs=164.3
Q ss_pred CccCCC-C-chhHHHHHHHHHhhhCC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCC
Q 012321 202 FEYGRY-G-NPTTVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 202 ~~Y~R~-~-~p~~~~Lee~lA~l~g~----e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~g 274 (466)
..|+|. | -+.++.|.+++++++|. ++.|++|.|. ++|..++++++.+||+|++.+|.|.+....+ ...|
T Consensus 63 ~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~----~maG 138 (420)
T KOG0257|consen 63 NQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQV----VMAG 138 (420)
T ss_pred ccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHH----hhcC
Confidence 345543 4 35688999999998874 5667777777 9999999999999999999999998865443 2234
Q ss_pred cEEEEeC-------------CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCC
Q 012321 275 ITATVID-------------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 275 i~v~~vd-------------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~ 338 (466)
.+..++. ..|.++++.+++++ ||+|++++||||||.+.. +++|+++|++||+++|.||+|...
T Consensus 139 ~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~k-Tk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~ 217 (420)
T KOG0257|consen 139 GTPVFVPLKPKEGNVSSSDWTLDPEELESKITEK-TKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWL 217 (420)
T ss_pred CcceeeccccccccccCccccCChHHHHhhccCC-ccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHH
Confidence 3333332 24899999999985 999999999999999985 889999999999999999997543
Q ss_pred Ccc---------chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCC-chHH-HHHHH-H-Hh---
Q 012321 339 LNQ---------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA-LNPN-AAYLI-I-RG--- 402 (466)
Q Consensus 339 ~~~---------~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~-ls~~-~A~l~-l-rg--- 402 (466)
+.. .|..+...+-+.|++|+++..||. .||+++++.++..++.++...... ..++ .|-.. . .+
T Consensus 218 v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWr-lGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~ 296 (420)
T KOG0257|consen 218 VYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWR-LGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELAC 296 (420)
T ss_pred hhCCCcceeeecCCchhheEEEeccccceeeeeeee-eeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhc
Confidence 221 122333568999999999999985 689999888888888777655422 2222 11111 1 11
Q ss_pred -----hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 403 -----MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 403 -----L~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
......+.+.++++++.|++.|.+.
T Consensus 297 ~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 297 LQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2444557788899999999999986
No 66
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.88 E-value=5.9e-21 Score=198.66 Aligned_cols=220 Identities=15% Similarity=0.187 Sum_probs=160.6
Q ss_pred chhHHHHHHHHHhhhCC--CcEEE-eCCHHHHHHHHHHHh----ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 209 NPTTVVVEEKMSALEGA--ESTVI-MASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~--e~~v~-~~SG~aAi~~al~al----l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
....+.+++.+++++|. ++.|+ ++++++++.+++.++ +++||+||++++.|++.+..+....+..|++++.++
T Consensus 62 ~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 141 (401)
T PRK10874 62 TARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLP 141 (401)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEe
Confidence 44577889999999997 34455 455569999998887 479999999999999866555556677788888775
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEecc
Q 012321 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSA 355 (466)
Q Consensus 282 ~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~ 355 (466)
. .|+++++++++++ |++|++++|+||||.+.|+++|.++|+++|+++++|++++.+.. .+...+++|+++.|+
T Consensus 142 ~~~~~~~d~~~l~~~i~~~-t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~ 220 (401)
T PRK10874 142 LGADRLPDVDLLPELITPR-TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSG 220 (401)
T ss_pred cCCCCcCCHHHHHHhcCcC-cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEec
Confidence 3 4789999999874 99999999999999999999999999999999999999864322 333356899999999
Q ss_pred ccccccccCceEEEEEeChHHHHHHHHHHH--------------------Hh-CCCchHHHHHHHHHhhHHHH-----HH
Q 012321 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------------------VL-GGALNPNAAYLIIRGMKTLH-----LR 409 (466)
Q Consensus 356 sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--------------------~~-G~~ls~~~A~l~lrgL~tl~-----~R 409 (466)
+|+++.+| .|+++.++++++++..+.. .+ .++.+......+..+++.+. ..
T Consensus 221 ~K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~ 297 (401)
T PRK10874 221 HKLYGPTG---IGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQA 297 (401)
T ss_pred ccccCCCc---cEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHH
Confidence 99877655 4899999988876542210 00 01222222222223333322 22
Q ss_pred HHHHHHHHHHHHHHHHcCCCcEE
Q 012321 410 VQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 410 ~e~~~~na~~La~~L~~~p~V~~ 432 (466)
.+++.+.++++.+.|+++|.++.
T Consensus 298 ~~~~~~l~~~l~~~l~~~~g~~~ 320 (401)
T PRK10874 298 ESWSRSLATLAEDALAKLPGFRS 320 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEE
Confidence 34555678888889988887653
No 67
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.88 E-value=8.5e-21 Score=196.49 Aligned_cols=212 Identities=19% Similarity=0.165 Sum_probs=160.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~L 288 (466)
.+...+||+.+++++|.+++++++||++|+..++.+++++||+|+++++.|++....+ ..+. .+...+...|++++
T Consensus 82 ~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~-~~~~---~~~~~~~~~d~~~l 157 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGV-RLCK---AKRYRYANNDMADL 157 (393)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH-HhcC---CceEEeCCCCHHHH
Confidence 5778999999999999999999999999999999999999999999999999866544 2222 22233446788999
Q ss_pred HHhccC---C--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc-------hh--ccCCcEEEec
Q 012321 289 EAALNN---N--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------AL--SLGADLVLHS 354 (466)
Q Consensus 289 e~ai~~---~--~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~-------pl--~~gaDivv~S 354 (466)
++++++ . ++++|++++++||+|.+.|+++|.++|++||+++|+|++|+.+.... .. ..+.|+++.|
T Consensus 158 ~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s 237 (393)
T TIGR01822 158 EAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGT 237 (393)
T ss_pred HHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEE
Confidence 988864 1 48999999999999999999999999999999999999986543211 11 2257899999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHHHHcC
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~t---l~~R~e~~~~na~~La~~L~~~ 427 (466)
+||+++|. ++|++++++++++.++.... .++++..+.....++..++. .+.+.++..++++.+.+.|++.
T Consensus 238 ~sK~l~g~---r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (393)
T TIGR01822 238 LGKALGGA---SGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA 312 (393)
T ss_pred ChHHhhCC---CcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999864 47999999999988876432 23333344332223333333 3445566778888888888764
No 68
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.88 E-value=7.4e-21 Score=195.42 Aligned_cols=220 Identities=18% Similarity=0.223 Sum_probs=164.6
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhcc---CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~~~SG~aAi~~al~all~---pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
....++++.+++++|.+ +.++++++++++..++.++.. +||+|+++++.|++.+..+....+..|+++.+++.
T Consensus 43 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (373)
T cd06453 43 DAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD 122 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC
Confidence 44667889999999975 555666677999999999887 89999999999998665554555567888887753
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-chhccCCcEEEecccc
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATK 357 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~-~pl~~gaDivv~S~sK 357 (466)
.|++++++.+++ ++++|++++|+||||.+.|+++|.++|+++|+++++|++++.+... .....|+|+++.|++|
T Consensus 123 ~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 201 (373)
T cd06453 123 DDGQLDLEALEKLLTE-RTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHK 201 (373)
T ss_pred CCCCcCHHHHHHHhcC-CceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEecccc
Confidence 389999999987 4999999999999999999999999999999999999998765442 2335689999999999
Q ss_pred ccccccCceEEEEEeChHHHHHHHHHHHH--------------------h-CCCchHHH---HHHHHHhhH--HHHHHHH
Q 012321 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHV--------------------L-GGALNPNA---AYLIIRGMK--TLHLRVQ 411 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~~eli~~l~~~~~~--------------------~-G~~ls~~~---A~l~lrgL~--tl~~R~e 411 (466)
++++++ +|+++++++++++++..... + .++.+... .+.++..++ .++.+.+
T Consensus 202 ~~~~~g---~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~ 278 (373)
T cd06453 202 MLGPTG---IGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAA 278 (373)
T ss_pred ccCCCC---cEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 999854 68999999888776543210 0 01121111 122222222 2344566
Q ss_pred HHHHHHHHHHHHHHcCCCcEEE
Q 012321 412 QQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~~V 433 (466)
++.+.++++.+.|+++|.++.+
T Consensus 279 ~~~~~~~~l~~~l~~~~~~~~~ 300 (373)
T cd06453 279 HEHELTAYALERLSEIPGVRVY 300 (373)
T ss_pred HHHHHHHHHHHHHhcCCCeEEe
Confidence 6778888899999998876544
No 69
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.88 E-value=7.7e-21 Score=192.18 Aligned_cols=218 Identities=22% Similarity=0.228 Sum_probs=165.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----C
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 283 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----~ 283 (466)
..+..+++++.+++++|.++.+++++|++++..++.+++++||+|+++++.|...+... ......|+++..++. .
T Consensus 30 ~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 108 (338)
T cd06502 30 EDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAG-APEFLSGVKLLPVPGENGKL 108 (338)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCC-cHHHHcCceEEeecCCCCcC
Confidence 57889999999999999778889999999999999999999999999999987644211 112225777777754 5
Q ss_pred CHHHHHHhccC------CCceEEEEeCCCCCCcc--cccHHHHHHHHHhcCCEEEEeCCCCCC------CccchhccCCc
Q 012321 284 DMEGLEAALNN------NNVSLFFTESPTNPFLR--CVDVKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLGAD 349 (466)
Q Consensus 284 D~e~Le~ai~~------~~tklV~lesPsNPtG~--v~dl~~I~ela~~~gillIvD~t~a~~------~~~~pl~~gaD 349 (466)
|+++|++++++ .++++|++++|+||.+. ..|+++|+++|+++|+++|+|++|..+ ........++|
T Consensus 109 d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d 188 (338)
T cd06502 109 TPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVD 188 (338)
T ss_pred CHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCC
Confidence 79999999874 14899999999998442 346788999999999999999986321 11122335789
Q ss_pred EEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCC--chHHHHHHHHHhhHH--HHHHHHHHHHHHHHHHHHHH
Q 012321 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKT--LHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 350 ivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~--ls~~~A~l~lrgL~t--l~~R~e~~~~na~~La~~L~ 425 (466)
+++.|+||++++++ |++++++++++++++.....++.. .++..++.++..|+. ...++++..++++++.+.|+
T Consensus 189 ~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~ 265 (338)
T cd06502 189 SVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALE 265 (338)
T ss_pred EEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999875 556778899999988776555432 344555555555554 45566788888999999998
Q ss_pred cCCC
Q 012321 426 AHPK 429 (466)
Q Consensus 426 ~~p~ 429 (466)
+++.
T Consensus 266 ~~~~ 269 (338)
T cd06502 266 ELGG 269 (338)
T ss_pred hcCC
Confidence 8653
No 70
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1.6e-20 Score=193.48 Aligned_cols=216 Identities=17% Similarity=0.190 Sum_probs=155.6
Q ss_pred chhHHHHHHHHHhhhC--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--
Q 012321 209 NPTTVVVEEKMSALEG--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g--~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-- 282 (466)
.+.++.+.+.+.+.+| . ++.+++++|++++..++.+++++||+|++++|+|..... .++..|+++..++.
T Consensus 64 ~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~ 139 (382)
T PRK06108 64 PELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVA----APKILGARVVCVPLDF 139 (382)
T ss_pred HHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHH----HHHHCCCEEEEeeCCC
Confidence 3455566666665556 2 445555556699999999999999999999999987553 34456777766542
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc------chhc--
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ------KALS-- 345 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~------~pl~-- 345 (466)
.|++++++.+++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... ....
T Consensus 140 ~~~~~~~d~~~l~~~~~~-~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 218 (382)
T PRK06108 140 GGGGWTLDLDRLLAAITP-RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIA 218 (382)
T ss_pred CCCCccCCHHHHHHhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcC
Confidence 478999999876 4999999999999999885 678999999999999999997654321 0011
Q ss_pred --cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh----hHHHHHHHHHHHHHHHH
Q 012321 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG----MKTLHLRVQQQNSTALR 419 (466)
Q Consensus 346 --~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg----L~tl~~R~e~~~~na~~ 419 (466)
....+++.|+||.++.+| .+.|++++++++++++...........+...+..+... .+.++...++..++.+.
T Consensus 219 ~~~~~~i~~~S~SK~~g~~G-~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~ 297 (382)
T PRK06108 219 EPDDRIIFVNSFSKNWAMTG-WRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDH 297 (382)
T ss_pred CCcCCEEEEeechhhccCcc-cceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 124588999999998776 46799999999999888765443333444433333222 23345556667778888
Q ss_pred HHHHHHcCCCc
Q 012321 420 MAKILEAHPKV 430 (466)
Q Consensus 420 La~~L~~~p~V 430 (466)
+.+.|++++.+
T Consensus 298 l~~~L~~~~~~ 308 (382)
T PRK06108 298 LVDALRALPGV 308 (382)
T ss_pred HHHHHHhCCCC
Confidence 99999887654
No 71
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.88 E-value=1.6e-20 Score=194.17 Aligned_cols=210 Identities=15% Similarity=0.200 Sum_probs=151.7
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~----e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...|++.+++++ |. ++.+++++|+ +++..++..++++||+|++++|+|+..... ++..|+++..++.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~----~~~~G~~v~~v~~ 144 (383)
T TIGR03540 69 MLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIG----TLFAGGEPYEMPL 144 (383)
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHH----HHhcCCEEEEEec
Confidence 345556655543 43 3356666665 999999999999999999999999985533 3446766665532
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----c--hhc
Q 012321 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----K--ALS 345 (466)
Q Consensus 283 -------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~--pl~ 345 (466)
.|++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... . .+.
T Consensus 145 ~~~~g~~~d~~~l~~~~~~-~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~ 223 (383)
T TIGR03540 145 KEENGFLPDFDAIPEDIAK-KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVD 223 (383)
T ss_pred CcccCCccCHHHHHhhccc-cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCC
Confidence 278899888876 4999999999999999998 688899999999999999998643211 1 111
Q ss_pred --cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh----hHHHHHHHHHHHHHHHH
Q 012321 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG----MKTLHLRVQQQNSTALR 419 (466)
Q Consensus 346 --~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg----L~tl~~R~e~~~~na~~ 419 (466)
....+++.|+||.++.+| ++.||+++++++++++.......+...+......+... .+.++...+...++++.
T Consensus 224 ~~~~~~i~~~SfSK~~g~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (383)
T TIGR03540 224 GAKDVGIEFHSLSKTYNMTG-WRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDL 302 (383)
T ss_pred CcccCEEEEEecccccCCcc-ceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 123588899999998777 56899999999999988776655444333333332222 34455556667788888
Q ss_pred HHHHHHcC
Q 012321 420 MAKILEAH 427 (466)
Q Consensus 420 La~~L~~~ 427 (466)
+.+.|+++
T Consensus 303 ~~~~L~~~ 310 (383)
T TIGR03540 303 LLEALKKI 310 (383)
T ss_pred HHHHHHhC
Confidence 99999886
No 72
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.9e-21 Score=199.54 Aligned_cols=223 Identities=17% Similarity=0.239 Sum_probs=164.6
Q ss_pred cCCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
++||+++...+|++++++.+|. .+.|++++|+ +++..++.+++++| |+|+++.|+|+... ..++..|+++..+
T Consensus 51 ~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~----~~~~~~G~~~~~v 126 (351)
T PRK01688 51 LNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS----VSAETIGVEIRTV 126 (351)
T ss_pred cccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH----HHHHHcCCEEEEe
Confidence 6778888889999999999996 4556666766 99999999999997 99999999998643 3344567777666
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCccc----hh-ccCC
Q 012321 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK----AL-SLGA 348 (466)
Q Consensus 281 d~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~--~gillIvD~t~a~~~~~~----pl-~~ga 348 (466)
+. .|++++++++ + ++++|++++|+||||.+.+.++|.++++. .++++|+||+|....... .. ..+.
T Consensus 127 ~~~~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n 204 (351)
T PRK01688 127 PTLDNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPH 204 (351)
T ss_pred ecCCCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCC
Confidence 42 4789999888 3 48999999999999999987777776653 268999999987543211 11 1234
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc-hHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-NPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l-s~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~L~ 425 (466)
-+++.|+||.+|.+| ++.|++++++++++.+++.+..++... ....+..++. +.+.+..++++..++++++.+.|+
T Consensus 205 ~iv~rSfSK~~glaG-lRiGy~i~~~~~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~ 283 (351)
T PRK01688 205 LVILRTLSKAFALAG-LRCGFTLANEEVINLLLKVIAPYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALK 283 (351)
T ss_pred EEEEecchHhhcCHH-HHHhHHhCCHHHHHHHHhccCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999998776 457899999999999887655443221 1112222222 234566677778888999999999
Q ss_pred cCCCcEEE
Q 012321 426 AHPKVKRV 433 (466)
Q Consensus 426 ~~p~V~~V 433 (466)
+++.+..+
T Consensus 284 ~~~~~~~~ 291 (351)
T PRK01688 284 EIPCVEQV 291 (351)
T ss_pred hCCCCCeE
Confidence 88766444
No 73
>PRK12414 putative aminotransferase; Provisional
Probab=99.87 E-value=2.8e-20 Score=192.95 Aligned_cols=213 Identities=15% Similarity=0.186 Sum_probs=154.2
Q ss_pred chhHHHHHHHHHhhhCC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 209 NPTTVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~-----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
.+.++.+++++++++|. ++.+++++|++++..++.+++.+||+|++++|+|......+ +..|.++..++.
T Consensus 69 ~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~ 144 (384)
T PRK12414 69 AALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIV----RLQGATPVAIKLS 144 (384)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHH----HHcCCEEEEEecC
Confidence 35567777777777775 24666666669999999999999999999999998755433 334665555432
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCcc----chhc-----
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS----- 345 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~---dl~~I~ela~~~gillIvD~t~a~~~~~----~pl~----- 345 (466)
.|+++|++++++ ++++|++++|+||||.++ ++++|+++|+++|+++|+|++|...... .++.
T Consensus 145 ~~~~~~d~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~ 223 (384)
T PRK12414 145 PEDFRVNWDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHREL 223 (384)
T ss_pred ccccccCHHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCc
Confidence 478999999976 499999999999999987 5788899999999999999998653221 1111
Q ss_pred cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHH
Q 012321 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 346 ~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~---tl~~R~e~~~~na~~La~ 422 (466)
.+..+++.|+||.++.+| .+.||+++++++++.+++.........+...++.+...++ ......+.++++++.+.+
T Consensus 224 ~~~~i~~~SfSK~~~~pG-lRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~ 302 (384)
T PRK12414 224 AERSVIVSSFGKSYHVTG-WRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLAR 302 (384)
T ss_pred cCcEEEEecccccccCcc-ceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 123499999999998777 4689999999999998887654433333433333333332 222334556778888889
Q ss_pred HHHcC
Q 012321 423 ILEAH 427 (466)
Q Consensus 423 ~L~~~ 427 (466)
.|+++
T Consensus 303 ~L~~~ 307 (384)
T PRK12414 303 ELAGS 307 (384)
T ss_pred HHHhC
Confidence 99886
No 74
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=7.5e-21 Score=197.24 Aligned_cols=217 Identities=14% Similarity=0.157 Sum_probs=162.9
Q ss_pred CCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
.+|+++....|++++++++|. ++.|++++|+ +++..++.+++++||+|++++|.|+... ..++..|+++..++.
T Consensus 81 ~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~~ 156 (380)
T PLN03026 81 YVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYV----FDAAVNGAEVIKVPR 156 (380)
T ss_pred ccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeec
Confidence 456677788999999999986 4566777776 8999999899999999999999997533 233456777766642
Q ss_pred -----CCHHHHHHhc-cCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc----chh-ccCCcEE
Q 012321 283 -----ADMEGLEAAL-NNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SLGADLV 351 (466)
Q Consensus 283 -----~D~e~Le~ai-~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~----~pl-~~gaDiv 351 (466)
.|+++|++++ ++ ++++|++++|+||||.+.+.+++.++++.. +++|+||+|...... ... .....++
T Consensus 157 ~~~~~~d~~~l~~~~~~~-~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv 234 (380)
T PLN03026 157 TPDFSLDVPRIVEAVETH-KPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIV 234 (380)
T ss_pred CCCCCcCHHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEE
Confidence 4789999988 44 599999999999999999999999999765 899999998643221 111 2234689
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L~~~p 428 (466)
+.|+||.++.+| .+.||+++++++++.+++.+..++ ++......+...| +.+....++..++++.+.+.|++++
T Consensus 235 ~~SfSK~~glaG-lRiGy~~~~~~~i~~l~~~~~~~~--~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 311 (380)
T PLN03026 235 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVP 311 (380)
T ss_pred EecchHhhcCcc-ccceeeecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999998777 467999999999998887665433 3333333333333 4445555666778888999999876
Q ss_pred Cc
Q 012321 429 KV 430 (466)
Q Consensus 429 ~V 430 (466)
.+
T Consensus 312 ~~ 313 (380)
T PLN03026 312 FL 313 (380)
T ss_pred CC
Confidence 54
No 75
>PRK07179 hypothetical protein; Provisional
Probab=99.87 E-value=1e-20 Score=197.56 Aligned_cols=212 Identities=15% Similarity=0.175 Sum_probs=165.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~ 287 (466)
+.+...+||++|++++|.+.++++++|++|+..++.++..+||+|+++...|.+.... +...|+++..++..|+++
T Consensus 97 ~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~~~ 172 (407)
T PRK07179 97 DDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEG----VRAAGAQAHPFRHNDVDH 172 (407)
T ss_pred CchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHH----HHHCCCeEEEecCCCHHH
Confidence 3468899999999999999999999999999999999999999999998888775433 234577777777789999
Q ss_pred HHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-------cchh--ccCCcEEEeccccc
Q 012321 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------QKAL--SLGADLVLHSATKF 358 (466)
Q Consensus 288 Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-------~~pl--~~gaDivv~S~sK~ 358 (466)
|+++++++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. ...+ ..++|+++.|++|+
T Consensus 173 l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~ 252 (407)
T PRK07179 173 LRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKA 252 (407)
T ss_pred HHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHh
Confidence 99999763479999999999999999999999999999999999999865322 1111 12469999999999
Q ss_pred cccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 359 IGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 359 lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~---lrgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
+++. +|++++++++++.++.... .++++..+.....+ ++.++....+.++..++++++.+.|++.
T Consensus 253 ~g~~----~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~ 322 (407)
T PRK07179 253 FAGR----AGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL 322 (407)
T ss_pred hhcc----CeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 9863 6899999988887764432 23444444433322 3334444556788888999999999876
No 76
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.87 E-value=1.4e-20 Score=194.91 Aligned_cols=210 Identities=17% Similarity=0.199 Sum_probs=150.7
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~----e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...|++++++++ |. ++.+++++|+ +++..++..++++||+|++++|+|+..... ++..|+++..++.
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~----~~~~g~~~~~v~~ 146 (385)
T PRK09276 71 MLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIG----TIFAGGEPYFMPL 146 (385)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHH----HHHcCCEEEEEec
Confidence 345666666654 42 3346666665 999999999999999999999999875433 3345666655431
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ch-hc--
Q 012321 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-LS-- 345 (466)
Q Consensus 283 -------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~p-l~-- 345 (466)
.|++++++.+.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .+ ..
T Consensus 147 ~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 225 (385)
T PRK09276 147 KEENGFLPDLDAIPEDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVP 225 (385)
T ss_pred CCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccC
Confidence 368888888876 4999999999999999997 578888899999999999998743221 11 11
Q ss_pred --cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHH
Q 012321 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALR 419 (466)
Q Consensus 346 --~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~~ 419 (466)
.+..|++.|+||.++.+| .+.||+++++++++++++.+.......+...+..+...+ +.++...++..++++.
T Consensus 226 ~~~~~~i~~~S~SK~~g~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 304 (385)
T PRK09276 226 GAKDVGIEFHSLSKTYNMTG-WRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDI 304 (385)
T ss_pred CCcCCEEEEecchhhcCCcc-hhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 134588999999998887 457899999999999988766555444443333333222 3344445566777888
Q ss_pred HHHHHHcC
Q 012321 420 MAKILEAH 427 (466)
Q Consensus 420 La~~L~~~ 427 (466)
+.+.|+++
T Consensus 305 l~~~L~~~ 312 (385)
T PRK09276 305 LVEGLRKL 312 (385)
T ss_pred HHHHHHhC
Confidence 88999875
No 77
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=8.8e-21 Score=195.53 Aligned_cols=223 Identities=20% Similarity=0.257 Sum_probs=161.9
Q ss_pred cCCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
..+|+++....|++.+++++|. ++.|++++|+ +++.+++.+++.+| |+|++++|.|+.... .++..|+++..+
T Consensus 53 ~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~----~~~~~g~~~~~v 128 (364)
T PRK04781 53 TRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAV----CARLQNAPLVEV 128 (364)
T ss_pred hccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHH----HHHHcCCEEEEE
Confidence 5667777788999999999986 3456666665 99999999999999 799999998875332 234457776665
Q ss_pred CC--------CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCccc-h---hc-
Q 012321 281 DP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK-A---LS- 345 (466)
Q Consensus 281 d~--------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~--~gillIvD~t~a~~~~~~-p---l~- 345 (466)
+. .|++++++.+...++++|++++|+||||.+++.+++.++++. +++++|+||+|....... + ..
T Consensus 129 ~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~ 208 (364)
T PRK04781 129 PLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLAR 208 (364)
T ss_pred ecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhh
Confidence 42 256777655433359999999999999999998888888764 478999999987543211 1 11
Q ss_pred cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh-----hHHHHHHHHHHHHHHHHH
Q 012321 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG-----MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 346 ~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg-----L~tl~~R~e~~~~na~~L 420 (466)
...-+++.|+||.++.+| ++.||+++++++++.+++.+..++. +.....++... ...+..++++..++++.+
T Consensus 209 ~~~vi~~~SfSK~~gl~G-lRvGy~v~~~~l~~~l~~~~~~~~~--~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l 285 (364)
T PRK04781 209 YDNLAVLRTLSKAHALAA-ARIGSLIANAELIAVLRRCQAPYPV--PTPCAALAEQALSAPALAVTARRVAEVRAERERL 285 (364)
T ss_pred CCCEEEEecChhhccccc-ceeeeeeCCHHHHHHHHhccCCCCC--CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 123489999999999777 4689999999999999887665543 23222222222 244555667778889999
Q ss_pred HHHHHcCCCcEEE
Q 012321 421 AKILEAHPKVKRV 433 (466)
Q Consensus 421 a~~L~~~p~V~~V 433 (466)
.+.|+++|.+..+
T Consensus 286 ~~~L~~~~~~~~~ 298 (364)
T PRK04781 286 HAALAQLPGVRRV 298 (364)
T ss_pred HHHHHhCCCCCeE
Confidence 9999988766444
No 78
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.87 E-value=3.9e-20 Score=191.71 Aligned_cols=215 Identities=14% Similarity=0.170 Sum_probs=161.3
Q ss_pred hHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~----g~----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
....|++.+++++ |. ++.++++++++|+..++.+++++||+|++++|+|...... ++..|+++..++.
T Consensus 69 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~~~~ 144 (393)
T PRK05764 69 GIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEM----VKLAGGVPVFVPT 144 (393)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCCEEEEEec
Confidence 3567777777765 32 3455555566999999999999999999999999875433 3456777766653
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----h-----
Q 012321 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A----- 343 (466)
Q Consensus 283 -------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~----p----- 343 (466)
.|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++++|++|....... +
T Consensus 145 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 223 (393)
T PRK05764 145 GEENGFKLTVEQLEAAITP-KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLS 223 (393)
T ss_pred CcccCCcCCHHHHHHhhCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcC
Confidence 257899999876 4899999999999999975 7889999999999999999987543211 1
Q ss_pred -hccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHH
Q 012321 344 -LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTAL 418 (466)
Q Consensus 344 -l~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~ 418 (466)
...+.++++.|+||.++.+|. +.|+++++++++++++......+...++..++.+.+.+ +.+....++..+++.
T Consensus 224 ~~~~~~~i~~~s~SK~~~~~G~-RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 302 (393)
T PRK05764 224 PELRDRTITVNGFSKAYAMTGW-RLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRD 302 (393)
T ss_pred CCCcCCEEEEecCcccccCccc-eeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 112467999999999987774 57999999999999888776655566666666555544 334444556677888
Q ss_pred HHHHHHHcCCCcE
Q 012321 419 RMAKILEAHPKVK 431 (466)
Q Consensus 419 ~La~~L~~~p~V~ 431 (466)
.+.+.|++++.+.
T Consensus 303 ~l~~~L~~~~g~~ 315 (393)
T PRK05764 303 LMVDGLNEIPGLE 315 (393)
T ss_pred HHHHHHhhCCCCc
Confidence 8999999886553
No 79
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.87 E-value=9.2e-21 Score=195.63 Aligned_cols=221 Identities=19% Similarity=0.186 Sum_probs=161.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCC---------------EEEEcCCCccchHHHHHhhccc
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG---------------HIVTTTDCYRKTRIFIETVLPK 272 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD---------------~VLv~~~~y~~t~~~~~~~l~~ 272 (466)
..+..+++++++++++|.++++++++|++|+.+++.+++++|| +||++.+.|......+...+..
T Consensus 43 ~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~ 122 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRL 122 (363)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHh
Confidence 4577899999999999999999999999999999999999998 8888875554321011233444
Q ss_pred CCcEEEEeC---CCCHHHHHHhccCCCceEEE-EeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCC
Q 012321 273 MGITATVID---PADMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA 348 (466)
Q Consensus 273 ~gi~v~~vd---~~D~e~Le~ai~~~~tklV~-lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~ga 348 (466)
.|.++.+++ ..|+++++++|+++ |++|+ +++|+||+|.+.|+++|.++||++|+++++|+++...+ .....+|+
T Consensus 123 ~g~~~v~v~~~~~~d~~~le~ai~~~-t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-~~~~~~g~ 200 (363)
T TIGR01437 123 GGGKVVEAGYANECSAEQLEAAITEK-TAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-QKYYRLGA 200 (363)
T ss_pred cCCeEEEEcCCCCCCHHHHHHhcChh-ceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-HHHHHcCC
Confidence 577766665 35899999999875 88655 68899999999999999999999999999999997332 33456789
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc-----hHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-----NPNAAYLIIRGM-KTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l-----s~~~A~l~lrgL-~tl~~R~e~~~~na~~La~ 422 (466)
|++++|+||++.|+. +|++++++++++.++......+..+ +......++..+ +....+++++.+++..+.+
T Consensus 201 D~~~~S~~K~l~gp~---~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~ 277 (363)
T TIGR01437 201 DLVIYSGAKAIEGPT---SGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIE 277 (363)
T ss_pred CEEEEeCCcccCCCc---eEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHH
Confidence 999999999998773 7999999888887654332221111 101111112111 1122345556667888999
Q ss_pred HHHcCCCcEEE
Q 012321 423 ILEAHPKVKRV 433 (466)
Q Consensus 423 ~L~~~p~V~~V 433 (466)
.|++.|++...
T Consensus 278 ~L~~i~g~~~~ 288 (363)
T TIGR01437 278 ALNTLKGVSAS 288 (363)
T ss_pred HHhcCCCeEEE
Confidence 99999887554
No 80
>PRK08960 hypothetical protein; Provisional
Probab=99.87 E-value=5.7e-20 Score=190.63 Aligned_cols=212 Identities=17% Similarity=0.175 Sum_probs=151.8
Q ss_pred hHHHHHHHHHhhh----C--C-CcEEEeC-CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-
Q 012321 211 TTVVVEEKMSALE----G--A-ESTVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (466)
Q Consensus 211 ~~~~Lee~lA~l~----g--~-e~~v~~~-SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd- 281 (466)
....|++.+++++ | . ++.++++ ++++++..++.+++.+||+|++++|+|+.....+. ..|.++..++
T Consensus 70 g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~----~~g~~~~~v~~ 145 (387)
T PRK08960 70 GLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLR----LVEGAAQLVPV 145 (387)
T ss_pred CCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hcCCeEEEEec
Confidence 3456667676664 3 1 3444455 55599999999999999999999999998765443 2344544432
Q ss_pred ------CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chhccC-
Q 012321 282 ------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLG- 347 (466)
Q Consensus 282 ------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl~~g- 347 (466)
..|++++++.++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... ......
T Consensus 146 ~~~~~~~~d~~~l~~~~~~~-~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~ 224 (387)
T PRK08960 146 GPDSRYQLTPALVERHWNAD-TVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDD 224 (387)
T ss_pred CcccCCCCCHHHHHHHhCcc-ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccC
Confidence 24689999988875 899999999999999987 556777899999999999998653221 112222
Q ss_pred CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL-----~tl~~R~e~~~~na~~La~ 422 (466)
..+++.|+||.++.+| .+.||++++++++++++........+.+.+.+..+...+ +.+....++..++++.+.+
T Consensus 225 ~vi~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~ 303 (387)
T PRK08960 225 DAFVLNSFSKYFGMTG-WRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLP 303 (387)
T ss_pred CEEEEeecccccCCcc-cEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 2378999999999877 468999999999999888776555444544433332222 3444555667778888999
Q ss_pred HHHcCC
Q 012321 423 ILEAHP 428 (466)
Q Consensus 423 ~L~~~p 428 (466)
.|++++
T Consensus 304 ~L~~~~ 309 (387)
T PRK08960 304 ALRELG 309 (387)
T ss_pred HHHhcC
Confidence 998864
No 81
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.87 E-value=4.9e-20 Score=191.02 Aligned_cols=212 Identities=12% Similarity=0.150 Sum_probs=151.7
Q ss_pred HHHHHHHHhhh----CC---CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC---
Q 012321 213 VVVEEKMSALE----GA---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (466)
Q Consensus 213 ~~Lee~lA~l~----g~---e~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd--- 281 (466)
..|++.+++++ |. ++.+++++| ++|+..++.+++++||+|++++|+|+.....+. ..|.++..++
T Consensus 69 ~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~----~~g~~~~~~~~~~ 144 (384)
T PRK06348 69 VELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIE----MVGGKPIILETYE 144 (384)
T ss_pred HHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHH----HcCCEEEEecCCc
Confidence 45666666655 32 344555555 599999999999999999999999998664443 3455554443
Q ss_pred --C--CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc---h---hc--c
Q 012321 282 --P--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A---LS--L 346 (466)
Q Consensus 282 --~--~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~---p---l~--~ 346 (466)
. .|+++|+++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....... + +. .
T Consensus 145 ~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 223 (384)
T PRK06348 145 EDGFQINVKKLEALITSK-TKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMP 223 (384)
T ss_pred CcCCcCCHHHHHHhhCcC-ccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCc
Confidence 1 4789999988764 899999999999999986 6788888999999999999987643211 1 11 2
Q ss_pred CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---H-HHHHHHHHHHHHHHHHHH
Q 012321 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---K-TLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 347 gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~-tl~~R~e~~~~na~~La~ 422 (466)
+..+++.|+||.++.+| ++.||++++++++++++........+.+......+...+ + .+....+...++++.+.+
T Consensus 224 ~~vi~~~SfSK~~~l~G-lRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~ 302 (384)
T PRK06348 224 ERTITFGSFSKDFAMTG-WRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYK 302 (384)
T ss_pred CcEEEEecchhccCCcc-ccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 34589999999998777 568999999999998887776544444454433333332 2 233344555677788888
Q ss_pred HHHcCCCc
Q 012321 423 ILEAHPKV 430 (466)
Q Consensus 423 ~L~~~p~V 430 (466)
.|++++.+
T Consensus 303 ~L~~~~~~ 310 (384)
T PRK06348 303 RIESIPNL 310 (384)
T ss_pred HHhcCCCc
Confidence 89877553
No 82
>PLN00175 aminotransferase family protein; Provisional
Probab=99.87 E-value=5.1e-20 Score=193.16 Aligned_cols=210 Identities=15% Similarity=0.202 Sum_probs=154.8
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSALE----GA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~----e~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...|++.+++++ |. ++.+++++| ++|+..++.+++++||+|++++|.|...... ++..|.++..++.
T Consensus 93 ~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 168 (413)
T PLN00175 93 VPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LSMAGAKIKTVTL 168 (413)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHH----HHHcCCEEEEEEC
Confidence 344555555543 42 234555555 5999999999999999999999999875433 3446777666642
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc---h-hc----
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LS---- 345 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~---p-l~---- 345 (466)
.|+++|++.+.++ +++|++++|+||||.+++ +++|+++|+++++++|+|++|....... + ..
T Consensus 169 ~~~~~~~~~~~l~~~~~~~-~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~ 247 (413)
T PLN00175 169 RPPDFAVPEDELKAAFTSK-TRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGM 247 (413)
T ss_pred CcccCCCCHHHHHHhcCcC-ceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCC
Confidence 4689999999774 999999999999999985 6788999999999999999987543211 1 11
Q ss_pred cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHH
Q 012321 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMA 421 (466)
Q Consensus 346 ~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~----tl~~R~e~~~~na~~La 421 (466)
.+..|++.|+||.++.+|. +.||+++++++++.++........+.+....+.+...++ .+....+++.++++.+.
T Consensus 248 ~~~vi~i~SfSK~~~~~G~-RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~ 326 (413)
T PLN00175 248 YERTVTMNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILV 326 (413)
T ss_pred cCcEEEEecchhhccCcch-heeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 1345899999999997774 579999999999999887765555555555554444442 34555667778888999
Q ss_pred HHHHcC
Q 012321 422 KILEAH 427 (466)
Q Consensus 422 ~~L~~~ 427 (466)
+.|+++
T Consensus 327 ~~L~~~ 332 (413)
T PLN00175 327 EGLKEV 332 (413)
T ss_pred HHHHHC
Confidence 999886
No 83
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.5e-20 Score=192.54 Aligned_cols=218 Identities=18% Similarity=0.289 Sum_probs=163.1
Q ss_pred CCCCchhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 205 GRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~e--~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
.+|+++...+|++.+++++|.. +.+++++|+ +++..++.+++++||+|++++|.|.... ..++..|+++..++
T Consensus 58 ~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~i~ 133 (356)
T PRK04870 58 NRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYR----MSAKLAGLEFVGVP 133 (356)
T ss_pred ccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHH----HHHHHcCCEEEEec
Confidence 3444556789999999999863 367777777 8888888888999999999999998644 33455677777764
Q ss_pred -----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---hh-ccCCcEEE
Q 012321 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---AL-SLGADLVL 352 (466)
Q Consensus 282 -----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~---pl-~~gaDivv 352 (466)
..|++++++++.+.++++|++++|+||||.+++.+++.++++..++++|+|++|....... .+ .....+++
T Consensus 134 ~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~ 213 (356)
T PRK04870 134 LTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVM 213 (356)
T ss_pred CCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEE
Confidence 3478999999865459999999999999999999888888877789999999986432211 11 22345899
Q ss_pred eccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012321 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL---IIRGMKTLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l---~lrgL~tl~~R~e~~~~na~~La~~L~~~p~ 429 (466)
.|+|| ++.+| .+.|+++++++++++++..+..+ ..+.+..+. ++...+.+...+++..++++.+.+.|++.|+
T Consensus 214 ~S~SK-~~~~G-lRiG~~i~~~~~i~~~~~~~~~~--~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 289 (356)
T PRK04870 214 RTVSK-LGLAG-LRLGYLAGHPAWIAELDKVRPPY--NVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPG 289 (356)
T ss_pred ecchh-hhhHH-HhhhhhhCCHHHHHHHHHccCCC--cCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999 77666 45799999999999888765323 233333332 3333445666677788889999999998877
Q ss_pred c
Q 012321 430 V 430 (466)
Q Consensus 430 V 430 (466)
+
T Consensus 290 ~ 290 (356)
T PRK04870 290 V 290 (356)
T ss_pred c
Confidence 6
No 84
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.87 E-value=5.3e-20 Score=191.41 Aligned_cols=211 Identities=17% Similarity=0.181 Sum_probs=150.2
Q ss_pred hHHHHHHHHHhhhCC-----CcEEEeCCHH-HHHHHHHHHhccC---CCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 211 TTVVVEEKMSALEGA-----ESTVIMASGM-SASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~-----e~~v~~~SG~-aAi~~al~all~p---GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
.++.+.+.+.+.+|. ++.+++++|+ +++..++.+++++ ||.|+++.|.|..... .+...|+++..++
T Consensus 70 lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~vp 145 (396)
T PRK09147 70 LREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG----AALLAGAEPYFLN 145 (396)
T ss_pred HHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH----HHHhcCCEEEEec
Confidence 344444444444463 2367776665 9999999999999 9999999999987543 3345577776664
Q ss_pred C-------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc---h---h-
Q 012321 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A---L- 344 (466)
Q Consensus 282 ~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~---p---l- 344 (466)
. .|++++++.+.+ ++++|++++|+||||.+++ +++|+++|++++++||+||+|....... + +
T Consensus 146 ~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 224 (396)
T PRK09147 146 CDPANNFAPDFDAVPAEVWA-RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLE 224 (396)
T ss_pred cCccccCccCHHHHHHHHhh-ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhh
Confidence 2 468899887766 4999999999999999985 6788888999999999999987643211 1 1
Q ss_pred ---cc-----CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHH
Q 012321 345 ---SL-----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQ 413 (466)
Q Consensus 345 ---~~-----gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~ 413 (466)
.. ...+++.|+||.++.+| .+.||+++++++++++.+.....+...+......+...+ +.+....++.
T Consensus 225 ~~~~~~~~~~~~vi~~~S~SK~~~~~G-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~ 303 (396)
T PRK09147 225 AAAELGRDDFKRLVVFHSLSKRSNVPG-LRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALY 303 (396)
T ss_pred hccccCccccccEEEEeccccccCCcc-ceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHH
Confidence 11 12399999999998887 568999999999999887766555455554433332222 3344555666
Q ss_pred HHHHHHHHHHHHcC
Q 012321 414 NSTALRMAKILEAH 427 (466)
Q Consensus 414 ~~na~~La~~L~~~ 427 (466)
.++++.+.+.|+++
T Consensus 304 ~~~~~~~~~~L~~~ 317 (396)
T PRK09147 304 REKFDAVTPILAPV 317 (396)
T ss_pred HHHHHHHHHHHHHh
Confidence 77777788887763
No 85
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.87 E-value=3.3e-20 Score=193.54 Aligned_cols=220 Identities=16% Similarity=0.175 Sum_probs=159.0
Q ss_pred chhHHHHHHHHHhhhCC--CcEEEeCCH-HHHHHHHHHH----hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 209 NPTTVVVEEKMSALEGA--ESTVIMASG-MSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~--e~~v~~~SG-~aAi~~al~a----ll~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
....+.+++.+++++|. ++.+++++| ++++..++.+ ++++||+||++++.|++....+....+..|+++..++
T Consensus 66 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 145 (406)
T PRK09295 66 TEKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIP 145 (406)
T ss_pred HHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEe
Confidence 45577889999999986 345555555 5899888876 4689999999999999876555555667788888775
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEecc
Q 012321 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSA 355 (466)
Q Consensus 282 ~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~ 355 (466)
. .|+++|+++++++ |++|++++|+||||.+.|+++|.++||++|+++++|++++.+.. .+...+++|+++.|+
T Consensus 146 ~~~~~~~d~~~l~~~i~~~-t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~ 224 (406)
T PRK09295 146 LNPDGTLQLETLPALFDER-TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSG 224 (406)
T ss_pred cCCCCCCCHHHHHHhcCCC-cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeeh
Confidence 3 4789999999874 99999999999999999999999999999999999999876543 233356899999999
Q ss_pred ccccccccCceEEEEEeChHHHHHHHHHHH----------------------HhCCCchHHHHHHHHHhhHHH-----HH
Q 012321 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH----------------------VLGGALNPNAAYLIIRGMKTL-----HL 408 (466)
Q Consensus 356 sK~lgG~gdv~gG~vvg~~eli~~l~~~~~----------------------~~G~~ls~~~A~l~lrgL~tl-----~~ 408 (466)
+|.++++| .|+++.++++++.+..... .-.++.+....+.+..+++.+ +.
T Consensus 225 ~K~~gp~G---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~ 301 (406)
T PRK09295 225 HKLYGPTG---IGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNN 301 (406)
T ss_pred hhccCCCC---cEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHH
Confidence 99777655 5888888887765431100 011122222222222233322 22
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcEE
Q 012321 409 RVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 409 R~e~~~~na~~La~~L~~~p~V~~ 432 (466)
..++..+.++++.+.|++.+.++.
T Consensus 302 i~~~~~~l~~~l~~~l~~~~~~~~ 325 (406)
T PRK09295 302 IAEYEQNLMHYALSQLESVPDLTL 325 (406)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEE
Confidence 334555677888888888887643
No 86
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.86 E-value=7.3e-20 Score=188.08 Aligned_cols=219 Identities=16% Similarity=0.202 Sum_probs=158.0
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
+..+++++.+++++|.+ +.+++++|++++..++.+++++||+|++..+.|+++...+....+..|+++..++.
T Consensus 44 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 123 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEG 123 (376)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCC
Confidence 66889999999999963 34555677799999999999999999999999988766555556666888877653
Q ss_pred -CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEeccccccc
Q 012321 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIG 360 (466)
Q Consensus 283 -~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK~lg 360 (466)
.|+++++++++++ +++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......|+|+++.|++|+++
T Consensus 124 ~~d~~~l~~~~~~~-~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~ 202 (376)
T TIGR01977 124 LISPERIKRAIKTN-TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLL 202 (376)
T ss_pred CcCHHHHHHhcCCC-CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEeccccccc
Confidence 3799999999774 99999999999999999999999999999999999999876543 23345689999999999998
Q ss_pred cccCceEEEEEeChHHHHHHHHH-----------------HHHhCCCchHHHHHHHHHhhHHH-----HHHHHHHHHHHH
Q 012321 361 GHNDVLAGSISGSGKLVTQIRNL-----------------HHVLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTAL 418 (466)
Q Consensus 361 G~gdv~gG~vvg~~eli~~l~~~-----------------~~~~G~~ls~~~A~l~lrgL~tl-----~~R~e~~~~na~ 418 (466)
++.+ .|++++.++..+..+... +...| +.+....+.+...++.+ +...+++.+.++
T Consensus 203 ~p~g-~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~-t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~ 280 (376)
T TIGR01977 203 GPQG-TGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESG-TLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTE 280 (376)
T ss_pred CCCC-ceEEEEcCCcCcCceecCCCccccccccccccchhhccCC-CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 8753 245555554322221100 00111 12221112222233332 334566778888
Q ss_pred HHHHHHHcCCCcE
Q 012321 419 RMAKILEAHPKVK 431 (466)
Q Consensus 419 ~La~~L~~~p~V~ 431 (466)
++.+.|++.+.++
T Consensus 281 ~~~~~l~~~~~~~ 293 (376)
T TIGR01977 281 KLLNGLREINKVK 293 (376)
T ss_pred HHHHHHhcCCCeE
Confidence 8999998887653
No 87
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.86 E-value=4.5e-20 Score=191.65 Aligned_cols=216 Identities=14% Similarity=0.185 Sum_probs=158.1
Q ss_pred chhHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 209 NPTTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~----g~----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
.+....|++.+++++ |. ++.++++++++++..++.+++++||+|++++|+|...... +...|+++..+
T Consensus 69 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~----~~~~g~~~~~v 144 (391)
T PRK08361 69 NAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVED----AKIAEAKPIRI 144 (391)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHH----HHHcCCEEEEE
Confidence 344567777777765 32 4455555566999999999999999999999999886543 33456666555
Q ss_pred CC-------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ch-h-
Q 012321 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-L- 344 (466)
Q Consensus 281 d~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~p-l- 344 (466)
+. .|++++++.++++ +++|++++|+||||.++| +++|+++|+++++++|+|++|...... .+ .
T Consensus 145 ~~~~~~~~~~d~~~l~~~i~~~-~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 223 (391)
T PRK08361 145 PLREENEFQPDPDELLELITKR-TRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIK 223 (391)
T ss_pred ecCCccCCCCCHHHHHHhcccc-cEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhh
Confidence 32 5789999999875 999999999999999998 788999999999999999998654321 11 1
Q ss_pred -ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh------HHHHHHHHHHHHHH
Q 012321 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM------KTLHLRVQQQNSTA 417 (466)
Q Consensus 345 -~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL------~tl~~R~e~~~~na 417 (466)
....++++.|+||.++.+| .+.||+++++++++++...........+.+....+...+ +.+....++..++.
T Consensus 224 ~~~~~~i~~~s~SK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (391)
T PRK08361 224 YAPDNTILANSFSKTFAMTG-WRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERR 302 (391)
T ss_pred cCCCCEEEEecCchhcCCcH-hhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHH
Confidence 1235689999999998776 457999999999998877665444444544444333333 23444555667778
Q ss_pred HHHHHHHHcCCCc
Q 012321 418 LRMAKILEAHPKV 430 (466)
Q Consensus 418 ~~La~~L~~~p~V 430 (466)
+.+.+.|++.+.+
T Consensus 303 ~~~~~~L~~~~~~ 315 (391)
T PRK08361 303 KLVLKRLKEMPHI 315 (391)
T ss_pred HHHHHHHHhCCCC
Confidence 8888999887654
No 88
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.86 E-value=4.7e-20 Score=188.76 Aligned_cols=210 Identities=18% Similarity=0.210 Sum_probs=153.7
Q ss_pred HHHHHHHHHhhh----CC---Cc-EEEeCCHH-HHHHHHHHHhccCC---CEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 212 TVVVEEKMSALE----GA---ES-TVIMASGM-SASTVMLLALVPAG---GHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~---e~-~v~~~SG~-aAi~~al~all~pG---D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
...|++.+++++ |. .+ .|++++|+ +++..++.+++++| |+|++++|+|...... ++..|+++..
T Consensus 38 ~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~----~~~~g~~~~~ 113 (350)
T TIGR03537 38 TKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERG----ALFAGGEPTA 113 (350)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHH----HHhcCCEEEE
Confidence 345566666553 52 23 67777776 89999999999887 6999999999986543 3456777766
Q ss_pred eCC-------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccch----hc
Q 012321 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA----LS 345 (466)
Q Consensus 280 vd~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~p----l~ 345 (466)
++. .|+++++++++++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++|.......+ ..
T Consensus 114 v~~~~~~~~~~d~~~l~~~~~~~-~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 192 (350)
T TIGR03537 114 VKLKKEDGFLLRLEKVEKSILEE-TKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALE 192 (350)
T ss_pred cccCcccCCccCHHHHHHhhhhc-cEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhh
Confidence 542 2789999988774 999999999999999998 88899999999999999999875432211 11
Q ss_pred --cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh---hHHHHHHHHHHHHHHHHH
Q 012321 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 346 --~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg---L~tl~~R~e~~~~na~~L 420 (466)
....+++.|+||.++.+| .+.|+++++++++++++.....++...+......+... .+.+..+.+++.++...+
T Consensus 193 ~~~~~~i~~~s~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~ 271 (350)
T TIGR03537 193 VGIENVLAFHSLSKRSGMTG-YRSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLF 271 (350)
T ss_pred cCcCCEEEEeecccccCCcc-ccceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 223488999999998877 46789999999999998877666655444333322222 234455556677778888
Q ss_pred HHHHHcC
Q 012321 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 272 ~~~l~~~ 278 (350)
T TIGR03537 272 IEFFNKV 278 (350)
T ss_pred HHHHHHC
Confidence 8888775
No 89
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.86 E-value=3.2e-20 Score=192.57 Aligned_cols=211 Identities=20% Similarity=0.249 Sum_probs=168.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
.+|.+.+||+++++++|.+.+++++||++|+.+++.++ +++||+||+++++|.++...+ ...|+++.++|.
T Consensus 31 ~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~----~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 31 TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMI----VLLGATPVMVDVDRDT 106 (379)
T ss_pred CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHH----HHcCCEEEEEecCCCc
Confidence 46889999999999999999999999999999999998 899999999999999876443 346888877753
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---hhccCCcEEEecccc
Q 012321 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---ALSLGADLVLHSATK 357 (466)
Q Consensus 283 --~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~---pl~~gaDivv~S~sK 357 (466)
.|+++++++++++ |++|+ |+|++|.+.|+++|.++|+++|+++|+|++++.+.... ....|.++..++.+|
T Consensus 107 ~~~d~~~l~~~i~~~-tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K 182 (379)
T PRK11658 107 LMVTPEAIEAAITPR-TKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIK 182 (379)
T ss_pred CCcCHHHHHHhcccC-CeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCC
Confidence 3789999999874 99987 67789999999999999999999999999987654332 234455555566668
Q ss_pred ccccccCceEEEEEeC-hHHHHHHHHHHHH----------------------hC--CCchHHHHHHHHHhhHHHHHHHHH
Q 012321 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV----------------------LG--GALNPNAAYLIIRGMKTLHLRVQQ 412 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~-~eli~~l~~~~~~----------------------~G--~~ls~~~A~l~lrgL~tl~~R~e~ 412 (466)
.+.++ .||+++++ ++++++++.++.. .| ..++.+.|.+.+..++.++..+++
T Consensus 183 ~l~~g---~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~ 259 (379)
T PRK11658 183 NITCA---EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNAR 259 (379)
T ss_pred cCccc---CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 77654 47888875 7888887764421 11 224556777778888889999999
Q ss_pred HHHHHHHHHHHHHcCCC
Q 012321 413 QNSTALRMAKILEAHPK 429 (466)
Q Consensus 413 ~~~na~~La~~L~~~p~ 429 (466)
.+++++.+.+.|++.|.
T Consensus 260 r~~~a~~~~~~L~~~~~ 276 (379)
T PRK11658 260 RREIAARYLQALADLPF 276 (379)
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 99999999999988763
No 90
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.86 E-value=2.5e-20 Score=189.83 Aligned_cols=219 Identities=16% Similarity=0.275 Sum_probs=160.8
Q ss_pred CCCCchhHHHHHHHHHhhhCC-CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
.+|+++...+|++.++++++. .+.+++++| ++++..++.+++++||+|++++|+|+... ..+...|+++..++.
T Consensus 49 ~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~ 124 (346)
T TIGR01141 49 HRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYE----ISAKIHGAEVVKVPL 124 (346)
T ss_pred hcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEecc
Confidence 345566678999999999985 344445555 58998888899999999999999997533 234456777777653
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCcc-ch---hc-cCCcE
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-KA---LS-LGADL 350 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~--gillIvD~t~a~~~~~-~p---l~-~gaDi 350 (466)
.|+++++++++++ +++|++++|+||||.+.+++++.++++.+ |+++|+|++|...... .+ .. ...++
T Consensus 125 ~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 125 DEDGQLDLEDILVAIDDK-PKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCCCCCHHHHHHhcCCC-CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEE
Confidence 5789999988764 99999999999999999999999999887 9999999998742211 11 11 22358
Q ss_pred EEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII---RGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 351 vv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~l---rgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
++.|+||+++.+| .+.|+++++++++++++.....++ .++.....+. +....+..+.++..++++.+.+.|+++
T Consensus 204 ~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 280 (346)
T TIGR01141 204 VLRTLSKAFGLAG-LRIGYAIANAEIIDALNKVRAPFN--LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL 280 (346)
T ss_pred EEehhhHhhhchh-hhceeeecCHHHHHHHHhccCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8899999998776 457999999999988877654433 2333322222 222335556677788889999999988
Q ss_pred CCcE
Q 012321 428 PKVK 431 (466)
Q Consensus 428 p~V~ 431 (466)
|++.
T Consensus 281 ~g~~ 284 (346)
T TIGR01141 281 PGLE 284 (346)
T ss_pred CCCE
Confidence 7654
No 91
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.86 E-value=5e-20 Score=191.49 Aligned_cols=168 Identities=16% Similarity=0.224 Sum_probs=136.2
Q ss_pred hhHHHHHHHHHhhhCCC--cEE-EeCCHHHHHHHHHHHh----ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 210 PTTVVVEEKMSALEGAE--STV-IMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e--~~v-~~~SG~aAi~~al~al----l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...+.+++.+++++|.+ +.+ +++++++++.+++.++ +++||+||++++.|++.+..+...++..|+++..++.
T Consensus 60 ~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 139 (398)
T TIGR03392 60 ARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPI 139 (398)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEec
Confidence 44677899999999973 345 4555569999999887 4789999999999998655555556777888887753
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEeccc
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~s 356 (466)
.|+++++++++++ |++|++++|+||||.+.|+++|.++||++|+++++|++++.+.. .+...+++|+++.|++
T Consensus 140 ~~~~~~~~~~l~~~i~~~-t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~ 218 (398)
T TIGR03392 140 GADLLPDIRQLPELLTPR-TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGH 218 (398)
T ss_pred CCCCCcCHHHHHHHhccC-ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecc
Confidence 3789999999875 99999999999999999999999999999999999999865432 2333467999999999
Q ss_pred cccccccCceEEEEEeChHHHHHHH
Q 012321 357 KFIGGHNDVLAGSISGSGKLVTQIR 381 (466)
Q Consensus 357 K~lgG~gdv~gG~vvg~~eli~~l~ 381 (466)
|.++++| .|+++.++++++++.
T Consensus 219 K~~gp~G---~G~l~~~~~~~~~~~ 240 (398)
T TIGR03392 219 KLYGPTG---IGVLYGKTELLEAMP 240 (398)
T ss_pred cccCCCc---eEEEEEcHHHHhhCC
Confidence 9887654 589999988887664
No 92
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.86 E-value=1.4e-20 Score=191.44 Aligned_cols=215 Identities=18% Similarity=0.244 Sum_probs=161.9
Q ss_pred ccCCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 203 EYGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 203 ~Y~R~~~p~~~~Lee~lA~l~g~e-~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
.|.+|+++....|++.+++++|.+ +.+++++|+ +++..++ .++.+| .|++.+|+|..... .++..|+++..+
T Consensus 40 ~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~-~~l~~g-~vl~~~p~y~~~~~----~~~~~g~~~~~~ 113 (330)
T TIGR01140 40 AWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLP-RLLAPG-RVLVLAPTYSEYAR----AWRAAGHEVVEL 113 (330)
T ss_pred HHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHH-HHhCCC-eEEEeCCCcHHHHH----HHHHcCCEEEEe
Confidence 467778777899999999999973 677777777 6777654 446777 69999999987543 345678888887
Q ss_pred CCCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccch-h----ccCCcEEE
Q 012321 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA-L----SLGADLVL 352 (466)
Q Consensus 281 d~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~p-l----~~gaDivv 352 (466)
+ |++++++.+++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|........ . ..+.++++
T Consensus 114 ~--d~~~l~~~~~~--~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~ 189 (330)
T TIGR01140 114 P--DLDRLPAALEE--LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVL 189 (330)
T ss_pred C--CHHHHHhhccc--CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEE
Confidence 7 89999999843 789999999999999998 66678888999999999999875443211 1 12456999
Q ss_pred eccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHcCCC
Q 012321 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~---tl~~R~e~~~~na~~La~~L~~~p~ 429 (466)
.|+||+++.+| .+.|++++++++++++......+ ..+...+..+.+.++ ......++.+++.+.+.+.|++++.
T Consensus 190 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 266 (330)
T TIGR01140 190 RSLTKFFGLAG-LRLGFVVAHPALLARLREALGPW--TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGG 266 (330)
T ss_pred EecchhhcCch-hhhhheeCCHHHHHHHHhcCCCC--CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999776 56799999999998887665433 234444444333333 3344556777888899999999876
Q ss_pred c
Q 012321 430 V 430 (466)
Q Consensus 430 V 430 (466)
+
T Consensus 267 ~ 267 (330)
T TIGR01140 267 L 267 (330)
T ss_pred c
Confidence 5
No 93
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.86 E-value=4.1e-20 Score=192.21 Aligned_cols=209 Identities=13% Similarity=0.140 Sum_probs=148.9
Q ss_pred HHHHHHHHhhh----CC----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 213 VVVEEKMSALE----GA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 213 ~~Lee~lA~l~----g~----e~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
..|++.+++++ |. ++.+++++| ++++..++.+++++||+|++++|+|+.....+ ...|+++..++.
T Consensus 76 ~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~~ 151 (394)
T PRK05942 76 ASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGP----LIAGAQIYPIILK 151 (394)
T ss_pred HHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCEEEEeecC
Confidence 45666666654 42 334666555 49999999999999999999999999865433 345676665532
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ch---hc-
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA---LS- 345 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~p---l~- 345 (466)
.|++++++.+++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .+ +.
T Consensus 152 ~~~~~~~d~~~l~~~~~~-~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~ 230 (394)
T PRK05942 152 PENDWLIDLSSIPEEVAQ-QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPG 230 (394)
T ss_pred CccCCccCHHHHHHhccc-cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCC
Confidence 478999998876 4999999999999999997 778899999999999999998643221 11 11
Q ss_pred -cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHH
Q 012321 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRM 420 (466)
Q Consensus 346 -~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~----tl~~R~e~~~~na~~L 420 (466)
.+..+++.|+||.|+.+| .+.||++++++++++++......+...+...+..+...++ .+....++..++.+.+
T Consensus 231 ~~~~~i~~~SfSK~~~~~G-lRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 309 (394)
T PRK05942 231 AKDIGVEFHTLSKTYNMAG-WRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFL 309 (394)
T ss_pred ccccEEEEecchhccCChh-hheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 123588899999998776 4679999999999999887764443344433333333332 2333445556677778
Q ss_pred HHHHHcC
Q 012321 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|++.
T Consensus 310 ~~~L~~~ 316 (394)
T PRK05942 310 IQGLGEL 316 (394)
T ss_pred HHHHHHC
Confidence 8888765
No 94
>PRK08068 transaminase; Reviewed
Probab=99.86 E-value=6.5e-20 Score=190.31 Aligned_cols=213 Identities=13% Similarity=0.068 Sum_probs=152.9
Q ss_pred chhHHHHHHHHHhhh----CC---Cc-EEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 209 NPTTVVVEEKMSALE----GA---ES-TVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~----g~---e~-~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
.+....|++++++++ |. ++ .+++++| ++++..++.+++.+||+|++++|+|+..... ++..|+++..
T Consensus 69 ~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~----~~~~g~~~~~ 144 (389)
T PRK08068 69 FRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSG----VALARAQFET 144 (389)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHhcCCEEEE
Confidence 344667777777765 42 22 4545554 5899999999999999999999999876533 3446666655
Q ss_pred eCC-------CCHHHHHHhccCCCceEEEEeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCcc--c--h-h
Q 012321 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ--K--A-L 344 (466)
Q Consensus 280 vd~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl---~~I~ela~~~gillIvD~t~a~~~~~--~--p-l 344 (466)
++. .|++++++.+++ ++++|++++|+||||.+++. ++|.++|+++++++|+|++|...... . + .
T Consensus 145 i~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~ 223 (389)
T PRK08068 145 MPLIAENNFLPDYTKIPEEVAE-KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFL 223 (389)
T ss_pred eecccccCCCCCHHHHHHhccc-cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChh
Confidence 542 267889988876 48999999999999999975 57788899999999999998542211 1 1 1
Q ss_pred c----cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHH----HhhHHHHHHHHHHHHH
Q 012321 345 S----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII----RGMKTLHLRVQQQNST 416 (466)
Q Consensus 345 ~----~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~l----rgL~tl~~R~e~~~~n 416 (466)
. ....+++.|+||.|+.+| .+.||+++++++++.++.....+..+..+..+..+. .+-+.++...++..++
T Consensus 224 ~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 302 (389)
T PRK08068 224 QTPGAKDVGIELYTLSKTFNMAG-WRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESR 302 (389)
T ss_pred hCCCccCCEEEEecchhccCCcc-ceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 1 123489999999998777 568999999999999988776555443332222222 2234455666777788
Q ss_pred HHHHHHHHHcC
Q 012321 417 ALRMAKILEAH 427 (466)
Q Consensus 417 a~~La~~L~~~ 427 (466)
++.+.+.|+++
T Consensus 303 r~~~~~~L~~~ 313 (389)
T PRK08068 303 RNAFISACREI 313 (389)
T ss_pred HHHHHHHHHHC
Confidence 88888888875
No 95
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.86 E-value=3.5e-20 Score=195.03 Aligned_cols=208 Identities=15% Similarity=0.150 Sum_probs=152.9
Q ss_pred HHHHHHHHhhhC----CCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC----CC
Q 012321 213 VVVEEKMSALEG----AESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID----PA 283 (466)
Q Consensus 213 ~~Lee~lA~l~g----~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd----~~ 283 (466)
..|++.++++++ .++.|++++|+ +++..++.+++++||.|++++|+|+..... ++..|+++..++ ..
T Consensus 124 ~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~~~~g~ 199 (431)
T PRK15481 124 PELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINM----LRYAGFSASPVSVDAEGM 199 (431)
T ss_pred HHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH----HHHcCCeEEeeccCCCCC
Confidence 456677777654 24456666665 999999999999999999999999986543 445566666654 35
Q ss_pred CHHHHHHhccCCCceEEEEe-CCCCCCcccccHH---HHHHHHHhc-CCEEEEeCCCCCCCc---cchhc--cCCcEEEe
Q 012321 284 DMEGLEAALNNNNVSLFFTE-SPTNPFLRCVDVK---LVSDLCHKK-GAIVCIDGTFATPLN---QKALS--LGADLVLH 353 (466)
Q Consensus 284 D~e~Le~ai~~~~tklV~le-sPsNPtG~v~dl~---~I~ela~~~-gillIvD~t~a~~~~---~~pl~--~gaDivv~ 353 (466)
|+++|++++++ ++++|+++ +|+||||.+++.+ +|.++|+++ ++++|+||+|..... ..++. ....+++.
T Consensus 200 ~~~~l~~~~~~-~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~ 278 (431)
T PRK15481 200 QPEKLERALAQ-GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIR 278 (431)
T ss_pred CHHHHHHHHhc-CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEe
Confidence 78999999876 48999987 9999999999865 899999999 999999999864321 11121 12348999
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH------HHHHHHHHHHHHHHHHHHHHHcC
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~------tl~~R~e~~~~na~~La~~L~~~ 427 (466)
|+||.++ +| .+.||+++++++++++...........+...++++...++ .+....+...++.+.+.+.|+++
T Consensus 279 SfSK~~~-~G-lRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~ 356 (431)
T PRK15481 279 SVSKALG-PD-LRLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY 356 (431)
T ss_pred eeccccC-CC-ceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999 76 5678999999999988765554433445554444433332 24445566778888888988875
No 96
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.86 E-value=5e-20 Score=190.96 Aligned_cols=210 Identities=13% Similarity=0.120 Sum_probs=149.3
Q ss_pred HHHHHHHHHhhh----CC---Cc-EEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSALE----GA---ES-TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~---e~-~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...|++.+++++ |. ++ .|++++|+ +++..++.+++.+||+|++++|+|...... +...|+++..++.
T Consensus 70 ~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 145 (388)
T PRK07366 70 TLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGG----VYLAGGQIYPMPL 145 (388)
T ss_pred CHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHhcCCEEEEEEC
Confidence 445666666654 42 33 57777776 899999999999999999999999986543 3445766665532
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc------hhcc
Q 012321 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK------ALSL 346 (466)
Q Consensus 283 -------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~------pl~~ 346 (466)
.|++++++.+.++ +++|++++|+||||.+++ +++|+++|+++|++||+||+|....... ....
T Consensus 146 ~~~~~~~~d~~~l~~~~~~~-~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~ 224 (388)
T PRK07366 146 RAENDFLPVFADIPTEVLAQ-ARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQA 224 (388)
T ss_pred CCccCCCCCHHHHHHhhccc-ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhC
Confidence 3567887777654 899999999999999986 5677788999999999999987543211 1111
Q ss_pred ----CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc-hHH--HHHHHHH-hhHHHHHHHHHHHHHHH
Q 012321 347 ----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-NPN--AAYLIIR-GMKTLHLRVQQQNSTAL 418 (466)
Q Consensus 347 ----gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l-s~~--~A~l~lr-gL~tl~~R~e~~~~na~ 418 (466)
...|++.|+||.++.+| .+.||+++++++++++++.+...+.+. +.. .+...+. .-+.++...+...++++
T Consensus 225 ~~~~~~vi~~~SfSK~~g~~G-lRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~ 303 (388)
T PRK07366 225 DPEKSVSIEFFTLSKSYNMGG-FRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRD 303 (388)
T ss_pred CCCcccEEEEeecccccCCcc-hhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 12378899999998887 468999999999999988776554333 221 1212222 12345555666777888
Q ss_pred HHHHHHHcC
Q 012321 419 RMAKILEAH 427 (466)
Q Consensus 419 ~La~~L~~~ 427 (466)
.+.+.|+++
T Consensus 304 ~l~~~L~~~ 312 (388)
T PRK07366 304 AFINALHQI 312 (388)
T ss_pred HHHHHHHHC
Confidence 888889876
No 97
>PRK07337 aminotransferase; Validated
Probab=99.86 E-value=1e-19 Score=188.66 Aligned_cols=210 Identities=20% Similarity=0.220 Sum_probs=152.3
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC--
Q 012321 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-- 281 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd-- 281 (466)
...|++.+++++ |. ++.++++++++|+..++.+++++||+|++++|+|+.....+ ...|.++..++
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~ 144 (388)
T PRK07337 69 LAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFV----AAAEGRPVLVPSG 144 (388)
T ss_pred CHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEeecC
Confidence 556777777664 42 34455555569999999999999999999999999866443 33455555443
Q ss_pred -----CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chhccCCc
Q 012321 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLGAD 349 (466)
Q Consensus 282 -----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl~~gaD 349 (466)
..|++++++.++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... ....++.+
T Consensus 145 ~~~~~~~~~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 223 (388)
T PRK07337 145 PAERFQLTAADVEAAWGER-TRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDD 223 (388)
T ss_pred CccCCcCCHHHHHhhcCcc-ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCC
Confidence 24789999999874 899999999999999986 678889999999999999998743221 12223333
Q ss_pred -EEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHH
Q 012321 350 -LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 350 -ivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL-----~tl~~R~e~~~~na~~La~~ 423 (466)
+++.|+||.++.+|. +.||++++++++++++......+.+.+....+++...+ +.+....+++.++++.+.+.
T Consensus 224 vi~~~S~SK~~~~~G~-RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~ 302 (388)
T PRK07337 224 VITINSFSKYFNMTGW-RLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPA 302 (388)
T ss_pred EEEEEechhhcCCchh-heeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHH
Confidence 568999999988774 58999999999999988776655444444443333322 33444455667778888888
Q ss_pred HHcC
Q 012321 424 LEAH 427 (466)
Q Consensus 424 L~~~ 427 (466)
|+++
T Consensus 303 L~~~ 306 (388)
T PRK07337 303 LESL 306 (388)
T ss_pred HHhc
Confidence 8875
No 98
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.86 E-value=5e-20 Score=191.52 Aligned_cols=218 Identities=19% Similarity=0.229 Sum_probs=159.1
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~~~SG~aAi~~al~al----l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...+++++.+++++|.+ +.++++++++++.+++.++ +++||+|+++++.|++....+.......|++++.++.
T Consensus 62 ~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~ 141 (403)
T TIGR01979 62 EAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPL 141 (403)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEec
Confidence 45778899999999974 3555555568988888764 5789999999999998765565556667888877753
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEeccc
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~s 356 (466)
.|+++++++++++ +++|++++|+||||.+.|+++|.++||++|+++++|++++.+.. .+...+++|+++.|++
T Consensus 142 ~~~~~~~~~~l~~~i~~~-~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~ 220 (403)
T TIGR01979 142 DDDGTLDLDDLEKLLTEK-TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGH 220 (403)
T ss_pred CCCCCCCHHHHHHHhccC-CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEecc
Confidence 4789999999874 99999999999999999999999999999999999999876543 3334568999999999
Q ss_pred cccccccCceEEEEEeChHHHHHHHHHHH--------------------Hh-CCCchHHHHHHHHHhhH---H--HHHHH
Q 012321 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH--------------------VL-GGALNPNAAYLIIRGMK---T--LHLRV 410 (466)
Q Consensus 357 K~lgG~gdv~gG~vvg~~eli~~l~~~~~--------------------~~-G~~ls~~~A~l~lrgL~---t--l~~R~ 410 (466)
|++|+.| .|+++.++++++++..... .+ .++.+....+.+...++ . ++...
T Consensus 221 K~~gp~G---~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~ 297 (403)
T TIGR01979 221 KMYGPTG---IGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIE 297 (403)
T ss_pred cccCCCC---ceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHH
Confidence 9887554 5888888887776532110 00 01222222222222222 2 23345
Q ss_pred HHHHHHHHHHHHHHHcCCCcE
Q 012321 411 QQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 411 e~~~~na~~La~~L~~~p~V~ 431 (466)
++..+.++.+.+.|++++.++
T Consensus 298 ~~~~~l~~~l~~~l~~~~g~~ 318 (403)
T TIGR01979 298 AHEHELTAYALERLGEIPGLR 318 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCEE
Confidence 666777888888888887764
No 99
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.86 E-value=7.6e-20 Score=192.87 Aligned_cols=214 Identities=15% Similarity=0.135 Sum_probs=149.8
Q ss_pred hHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 211 TTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~--------e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
....|++.++++++. ++.++++++++|+.+++.+++++||+|++++|.|+..... ....|+++..++.
T Consensus 95 G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~~~~~~~ 170 (430)
T PLN00145 95 GLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEAR----AVFSGLEVRHFDL 170 (430)
T ss_pred cCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHH----HHHcCCEEEEeeC
Confidence 356677777776532 4455555556999999999999999999999999984432 2334666666542
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chh-cc-
Q 012321 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SL- 346 (466)
Q Consensus 283 -------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl-~~- 346 (466)
.|++++++.++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|....+. .++ ..
T Consensus 171 ~~~~~~~~d~~~l~~~~~~~-~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~ 249 (430)
T PLN00145 171 LPERGWEVDLEGVEALADEN-TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFG 249 (430)
T ss_pred CcccCCcCCHHHHHHHhCcC-ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhc
Confidence 4789999988875 999999999999999997 778889999999999999998754321 111 11
Q ss_pred --CCcEEEeccccccccccCceEEEEEe--ChHHHH------HHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHH
Q 012321 347 --GADLVLHSATKFIGGHNDVLAGSISG--SGKLVT------QIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQ 411 (466)
Q Consensus 347 --gaDivv~S~sK~lgG~gdv~gG~vvg--~~eli~------~l~~~~~~~G~~ls~~~A~l~lrgL-----~tl~~R~e 411 (466)
..-|++.|+||.++.+|+ +.||+++ ++.+++ .++.... .....+.+.++.+...+ +.+...++
T Consensus 250 ~~~~vi~~~S~SK~~~~pG~-RlG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~ 327 (430)
T PLN00145 250 EVAPVLTLGSISKRWVVPGW-RLGWIATCDPNGILKETKVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEFFTKTLG 327 (430)
T ss_pred ccCcEEEEeccccccCCCCe-eEEEEEEecchhhhhhhHHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 234899999999999986 4688875 344443 2333322 22222333333332222 34566677
Q ss_pred HHHHHHHHHHHHHHcCCCcE
Q 012321 412 QQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~ 431 (466)
+.+++++.+.+.|++++.+.
T Consensus 328 ~~~~~~~~~~~~L~~~~g~~ 347 (430)
T PLN00145 328 LLKETADICYEKIKEIKCIT 347 (430)
T ss_pred HHHHHHHHHHHHHhcCCCCC
Confidence 78888999999999887654
No 100
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=2.3e-20 Score=189.93 Aligned_cols=211 Identities=20% Similarity=0.278 Sum_probs=149.7
Q ss_pred cCCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
+.||++|....|++++++++|. +..|++++|+ +++..++. ++.+|+ |++.+|+|+.... .++..|+++..++
T Consensus 34 ~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~~----~~~~~G~~v~~vp 107 (332)
T PRK06425 34 ISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYKG----YAFTHGIRISALP 107 (332)
T ss_pred cccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHHH----HHHHcCCeEEEEe
Confidence 6788999999999999999996 4567777777 88888876 567764 6667999987553 3455688877765
Q ss_pred CC----CHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc--h-h----ccC
Q 012321 282 PA----DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK--A-L----SLG 347 (466)
Q Consensus 282 ~~----D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~--p-l----~~g 347 (466)
.. |.+.++ ..++++|++++|+||||.+++ +++|.++|+++|+++|+||+|....... + . ..+
T Consensus 108 ~~~~~~~~~~l~----~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~ 183 (332)
T PRK06425 108 FNLINNNPEILN----NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYG 183 (332)
T ss_pred CCcccCcHHHHh----hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCC
Confidence 42 333333 225899999999999999987 5667777899999999999987543211 1 1 112
Q ss_pred CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHH-hhHH-HHHHHHHHHHHHHHHHHHHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR-GMKT-LHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lr-gL~t-l~~R~e~~~~na~~La~~L~ 425 (466)
.-|++.|+||.++.+| ++.||+++++++++++++....+. .+...+..+.. ..+. ++...+...++++.+.+.|+
T Consensus 184 ~vi~~~SfSK~~~l~G-lRiGy~v~~~~li~~l~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 260 (332)
T PRK06425 184 NVIIGRSLTKILGIPS-LRIGYIATDDYNMKISRKITEPWS--VCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLE 260 (332)
T ss_pred CEEEEeecHHhcCCch-hhheeeecCHHHHHHHHHcCCCCc--cCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588999999999777 457999999999998887544332 22222222211 1222 23445666778888999998
Q ss_pred cC
Q 012321 426 AH 427 (466)
Q Consensus 426 ~~ 427 (466)
++
T Consensus 261 ~~ 262 (332)
T PRK06425 261 AM 262 (332)
T ss_pred HC
Confidence 76
No 101
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=2.1e-20 Score=182.07 Aligned_cols=254 Identities=19% Similarity=0.282 Sum_probs=199.6
Q ss_pred cccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc-cCCCEEEEcC
Q 012321 178 VNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-PAGGHIVTTT 256 (466)
Q Consensus 178 ~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all-~pGD~VLv~~ 256 (466)
++|+|++.|+.++...+.+...++-.|+ .+|++.+||+.+|+++|.|.++|++||+..+.++++..+ ++|.+||+.+
T Consensus 26 LRSDTvT~PTdeMr~am~eA~vgDdVyG--eD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd 103 (384)
T KOG1368|consen 26 LRSDTVTVPTDEMRRAMAEASVGDDVYG--EDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGD 103 (384)
T ss_pred cccccccCChHHHHHHHhhcccCccccc--CCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEecc
Confidence 7899999999998888888877888888 679999999999999999999999999999989888877 4899999998
Q ss_pred CCccchHHHHHhhcccCCcEEEEeC-----CCCHHHHHHhccCC-------CceEEEEeCCCCCCc-ccccH---HHHHH
Q 012321 257 DCYRKTRIFIETVLPKMGITATVID-----PADMEGLEAALNNN-------NVSLFFTESPTNPFL-RCVDV---KLVSD 320 (466)
Q Consensus 257 ~~y~~t~~~~~~~l~~~gi~v~~vd-----~~D~e~Le~ai~~~-------~tklV~lesPsNPtG-~v~dl---~~I~e 320 (466)
..|--.++.- .+..-.|+.++.+. ..|+++|++++... .|++|.+|+.+|.+| .++++ ++|.+
T Consensus 104 ~~HI~~~E~g-g~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~ 182 (384)
T KOG1368|consen 104 RAHIHRYEQG-GISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKA 182 (384)
T ss_pred chheeehhcc-ChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHH
Confidence 8876544321 11122355555443 24799999999733 389999999999887 88875 56788
Q ss_pred HHHhcCCEEEEeCC--C----CCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchH-
Q 012321 321 LCHKKGAIVCIDGT--F----ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP- 393 (466)
Q Consensus 321 la~~~gillIvD~t--~----a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~- 393 (466)
+|+++|+.|++|.+ | +.++..+-+..-+|-|-..+||.+|.| +|.+++|+++++++.+..++.+|+.+-+
T Consensus 183 lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQs 259 (384)
T KOG1368|consen 183 LAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQS 259 (384)
T ss_pred HHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHH
Confidence 89999999999998 2 334444444445788999999999998 5889999999999999999999988755
Q ss_pred -HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCC
Q 012321 394 -NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 394 -~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL 438 (466)
..|..++-.|......+++-.+.+..|+++++..+.+ +|.-|..
T Consensus 260 GvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i-~v~v~a~ 304 (384)
T KOG1368|consen 260 GVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEI-RVEVPAV 304 (384)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhccccce-eeecchh
Confidence 3445555566655556777788999999999977655 4555543
No 102
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.86 E-value=1.2e-19 Score=184.43 Aligned_cols=212 Identities=21% Similarity=0.210 Sum_probs=163.3
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~L 288 (466)
.+....+++.++++++.++.+++++|++++..++.+++++||+|++.++.|+..... +...|+++..++..|++++
T Consensus 60 ~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l 135 (360)
T TIGR00858 60 SPLHEELEEELAEWKGTEAALLFSSGYLANVGVISALVGKGDLILSDALNHASLIDG----CRLSGARVRRYRHNDVEHL 135 (360)
T ss_pred cHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHhCCCCCEEEEEccccHHHHHH----HHhcCCceEEecCCCHHHH
Confidence 467889999999999988999999999888778888899999999999999876533 3445777777777889999
Q ss_pred HHhccCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-c--h------h-ccCCcEEEecc
Q 012321 289 EAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K--A------L-SLGADLVLHSA 355 (466)
Q Consensus 289 e~ai~~~---~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~-~--p------l-~~gaDivv~S~ 355 (466)
++.+++. ++++|++++++|++|.+.|+++|.++|+++|+++|+|++|..+... . + . ..+.||++.|+
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 215 (360)
T TIGR00858 136 ERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTL 215 (360)
T ss_pred HHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEec
Confidence 9988642 3799999999999999999999999999999999999998654221 1 0 1 13678999999
Q ss_pred ccccccccCceEEEEEeChHHHHHHHHHHHH--hCCCchHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYL---IIRGMKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 356 sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~--~G~~ls~~~A~l---~lrgL~tl~~R~e~~~~na~~La~~L~~~p 428 (466)
||++++. ||+++++++++++++..... .+...++..... +++.++....+.++..++++.+.+.|++++
T Consensus 216 sK~~~~~----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 289 (360)
T TIGR00858 216 SKALGSY----GAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG 289 (360)
T ss_pred hhhhhcc----CcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999875 48999999998887654332 222333443322 233333344566778889999999998764
No 103
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.86 E-value=9.4e-20 Score=191.30 Aligned_cols=168 Identities=20% Similarity=0.259 Sum_probs=135.8
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHH----hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~~~SG~aAi~~al~a----ll~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...+.+++.+++++|.+ +.++++++++++..++.+ .+++||+|+++++.|++.+..+....+..|+++..++.
T Consensus 76 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~ 155 (424)
T PLN02855 76 DAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGL 155 (424)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEec
Confidence 34678899999999972 344555556899888875 36899999999999998776666666777888877753
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEeccc
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~s 356 (466)
.|++++++.+++ ++++|++++|+||||.+.|+++|.++|+++|+++++|++++.+.. .+..++++|+++.|+|
T Consensus 156 ~~~~~~~~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 234 (424)
T PLN02855 156 TPDEVLDVEQLKELLSE-KTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSH 234 (424)
T ss_pred CCCCCcCHHHHHHHhcc-CceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecc
Confidence 378999999987 499999999999999999999999999999999999999876532 3334568999999999
Q ss_pred cccccccCceEEEEEeChHHHHHHH
Q 012321 357 KFIGGHNDVLAGSISGSGKLVTQIR 381 (466)
Q Consensus 357 K~lgG~gdv~gG~vvg~~eli~~l~ 381 (466)
|+++++| .|+++.++++++++.
T Consensus 235 K~~gp~G---~G~l~~~~~~~~~~~ 256 (424)
T PLN02855 235 KMCGPTG---IGFLWGKSDLLESMP 256 (424)
T ss_pred cccCCCc---cEEEEEchhhhhcCC
Confidence 9766554 588888888877653
No 104
>PRK09082 methionine aminotransferase; Validated
Probab=99.86 E-value=1.3e-19 Score=187.92 Aligned_cols=212 Identities=17% Similarity=0.158 Sum_probs=154.3
Q ss_pred hhHHHHHHHHHhhhCC----CcEEEeCC-HHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--
Q 012321 210 PTTVVVEEKMSALEGA----ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~----e~~v~~~S-G~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-- 282 (466)
+.++.+.+.+.+++|. +..+++++ |++|+..++.+++.+||+|++++|.|+.....+ +..|.++..++.
T Consensus 71 ~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~----~~~g~~~~~~~~~~ 146 (386)
T PRK09082 71 ALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAI----ELAGGRAVRVALQP 146 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEEecCc
Confidence 4567777777777775 22455554 569999999999999999999999999865444 335666666543
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCc-----cchhc----c
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALS----L 346 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~---dl~~I~ela~~~gillIvD~t~a~~~~-----~~pl~----~ 346 (466)
.|++++++.++++ +++|++++|+||||.++ ++++|.++|+++|+++|+|++|..... ..... .
T Consensus 147 ~~~~~d~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~ 225 (386)
T PRK09082 147 PDFRVDWQRFAAAISPR-TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELR 225 (386)
T ss_pred ccccCCHHHHHHhcCcc-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCcc
Confidence 3789999999774 99999999999999885 578899999999999999999864322 11111 2
Q ss_pred CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHH
Q 012321 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR----GMKTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 347 gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lr----gL~tl~~R~e~~~~na~~La~ 422 (466)
+..+++.|+||.++.+| .+.||+++++++++.+++.........+...++.+.. .-+.+....+...++.+.+.+
T Consensus 226 ~~~i~~~S~SK~~~~~G-~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 304 (386)
T PRK09082 226 ERAFVVSSFGKTYHVTG-WKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRA 304 (386)
T ss_pred CcEEEEeechhhccchh-hhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 34589999999998777 4679999999999998887654444444443332222 223344445566788888888
Q ss_pred HHHcC
Q 012321 423 ILEAH 427 (466)
Q Consensus 423 ~L~~~ 427 (466)
.|+++
T Consensus 305 ~L~~~ 309 (386)
T PRK09082 305 ALANS 309 (386)
T ss_pred HHHhC
Confidence 88874
No 105
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=1.4e-20 Score=192.94 Aligned_cols=217 Identities=16% Similarity=0.212 Sum_probs=159.6
Q ss_pred cCCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
+.+|+++....|++++++++|. ++.|++++|+ +++..++.+++++| |+|++++|.|.... ..++..|+++..+
T Consensus 54 ~~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~----~~~~~~g~~v~~v 129 (354)
T PRK04635 54 LNRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA----ISAETFNVGVKAL 129 (354)
T ss_pred hccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEE
Confidence 5677777789999999999986 4566666666 99999999999999 89999999998643 2345567777766
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh-cCCEEEEeCCCCCCCccch----hc-cCCc
Q 012321 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKA----LS-LGAD 349 (466)
Q Consensus 281 d~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~-~gillIvD~t~a~~~~~~p----l~-~gaD 349 (466)
+. .|++.++ .+ + ++++|++++|+||||.+++.+++.++++. .++++|+||+|........ .. ...-
T Consensus 130 ~~~~~~~~~~~~l~-~~-~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~ 206 (354)
T PRK04635 130 PLTADYQLPLDYIE-QL-D-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNL 206 (354)
T ss_pred ecCCCCCCCHHHHH-hc-c-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCE
Confidence 53 3567776 34 3 48999999999999999999999999876 3799999999865432111 11 1223
Q ss_pred EEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHH---H--HhhHHHHHHHHHHHHHHHHHHHHH
Q 012321 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---I--RGMKTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 350 ivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~---l--rgL~tl~~R~e~~~~na~~La~~L 424 (466)
+++.|+||+++.+| .+.|++++++++++.+......++. +......+ + .+.+.+..++++..++++.+.+.|
T Consensus 207 iv~~S~SK~~~l~G-lRlG~~i~~~~~~~~l~~~~~~~~~--~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 283 (354)
T PRK04635 207 VVLRTLSKAFALAG-ARCGFTLANEELIEILMRVIAPYPV--PLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAAL 283 (354)
T ss_pred EEEechHHHhhhhH-HHHhhhhCCHHHHHHHHhhcCCCCC--CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999998776 4579999999999888765443332 22222222 2 234556666777788889999999
Q ss_pred HcCCCc
Q 012321 425 EAHPKV 430 (466)
Q Consensus 425 ~~~p~V 430 (466)
++++.+
T Consensus 284 ~~~~~~ 289 (354)
T PRK04635 284 SMYGGA 289 (354)
T ss_pred HhCCCc
Confidence 988755
No 106
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=2.2e-20 Score=191.36 Aligned_cols=213 Identities=15% Similarity=0.202 Sum_probs=157.1
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC---
Q 012321 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd--- 281 (466)
++.+....|++.++++++. ++.+++++|+ +++..++.+++++||+|++++|.|+..... +...|.++..++
T Consensus 61 ~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~----~~~~g~~~~~~~~~~ 136 (359)
T PRK03158 61 YPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHN----AIIEGAEVREVPLKD 136 (359)
T ss_pred CCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHH----HHHcCCeEEEEecCC
Confidence 4555678899999999986 3456666665 899988889999999999999999875432 334566666654
Q ss_pred -CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcc----chh----ccCCcE
Q 012321 282 -PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----SLGADL 350 (466)
Q Consensus 282 -~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~--~gillIvD~t~a~~~~~----~pl----~~gaDi 350 (466)
..|++++++++++ ++++|++++|+||||.+.+.++|.++++. +|+++|+||+|...... ..+ ..+..+
T Consensus 137 ~~~d~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi 215 (359)
T PRK03158 137 GGHDLEAMLKAIDE-QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLI 215 (359)
T ss_pred CCcCHHHHHHhcCC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEE
Confidence 3478999988876 48999999999999999999999998877 59999999998653321 111 224568
Q ss_pred EEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 351 vv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
++.|+||.++.+| ++.||++++++++++++..+..++ .+......+...+ +.++...+...++.+.+.+.|+++
T Consensus 216 ~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 292 (359)
T PRK03158 216 VLRTFSKAYGLAA-LRVGYGIASEELIEKLNIARPPFN--TTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY 292 (359)
T ss_pred EEEechHhhcCcc-hhhehhcCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999777 467999999999998887665433 3444433333333 334444455566777788888876
No 107
>PRK07682 hypothetical protein; Validated
Probab=99.86 E-value=9.1e-20 Score=188.28 Aligned_cols=212 Identities=11% Similarity=0.133 Sum_probs=152.5
Q ss_pred hhHHHHHHHHHhhh----CC----CcEEEeCC-HHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 210 PTTVVVEEKMSALE----GA----ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~lA~l~----g~----e~~v~~~S-G~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
+....|++.+++++ |. ++.+++++ |++|+.+++.+++++||+|++++|+|+.....+ +..|.++..+
T Consensus 57 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~~ 132 (378)
T PRK07682 57 AGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLV----TLAGGVPVPV 132 (378)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHH----HHcCCEEEEe
Confidence 44556666666655 32 33455555 469999999999999999999999998754433 3345554444
Q ss_pred C-------CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc---h-hc-
Q 012321 281 D-------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LS- 345 (466)
Q Consensus 281 d-------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~---p-l~- 345 (466)
+ ..|++++++++.++ +++|++++|+||||.+++ +++|.++|+++++++|+|++|....... + ..
T Consensus 133 ~~~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 211 (378)
T PRK07682 133 ATTLENEFKVQPAQIEAAITAK-TKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASI 211 (378)
T ss_pred ecCCccCCCCCHHHHHhhcCcc-cEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhc
Confidence 2 34789999998774 999999999999999985 7889999999999999999987543211 1 11
Q ss_pred ---cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHH
Q 012321 346 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTAL 418 (466)
Q Consensus 346 ---~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~ 418 (466)
....+++.|+||.|+.+| .+.||+++++++++++...........+...+..+.+.+ ..+....+++.++++
T Consensus 212 ~~~~~~~i~~~S~SK~~~~~G-lR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~ 290 (378)
T PRK07682 212 KGMRERTILISGFSKGFAMTG-WRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRN 290 (378)
T ss_pred ccccCCEEEEecCcccccChh-hhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 134689999999998776 457999999999999887665443344444444333333 334555666778888
Q ss_pred HHHHHHHcC
Q 012321 419 RMAKILEAH 427 (466)
Q Consensus 419 ~La~~L~~~ 427 (466)
.+.+.|+++
T Consensus 291 ~~~~~L~~~ 299 (378)
T PRK07682 291 FFVTSFNEI 299 (378)
T ss_pred HHHHHHHHC
Confidence 899999876
No 108
>PRK07550 hypothetical protein; Provisional
Probab=99.86 E-value=7.1e-20 Score=189.73 Aligned_cols=213 Identities=16% Similarity=0.179 Sum_probs=153.2
Q ss_pred HHHHHHHHHhhhCC---CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 212 TVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 212 ~~~Lee~lA~l~g~---e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
++.+.+.+.+..|. ++.+++++|+ +|+..++.+++++||+|+++.|+|...... ++..|+++..++.
T Consensus 73 r~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~ 148 (386)
T PRK07550 73 REAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMW----LDMLGIRPVYLPCDEGPG 148 (386)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhcCCEEEEEecCCCcC
Confidence 34444444444442 3566666665 899999999999999999999999876533 3456777766653
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----chhc---c-CC
Q 012321 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS---L-GA 348 (466)
Q Consensus 283 --~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~pl~---~-ga 348 (466)
.|+++++++++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .... . ..
T Consensus 149 ~~~~~~~l~~~~~~~-~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~ 227 (386)
T PRK07550 149 LLPDPAAAEALITPR-TRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDT 227 (386)
T ss_pred CCCCHHHHHHHhccc-CcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCcccc
Confidence 2688899999874 899999999999999986 788999999999999999998643211 1111 1 12
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH----HHHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL----HLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl----~~R~e~~~~na~~La~~L 424 (466)
.+++.|+||.++.+| .+.|+++++++++++++......+.+.+...++.+...++.+ ....++..++++.+.+.|
T Consensus 228 ~i~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 306 (386)
T PRK07550 228 LVHLYSFSKSYALTG-HRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVF 306 (386)
T ss_pred EEEEecchhhccCcc-cceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478999999998666 468999999999998888776655555555555444444332 222345567778888999
Q ss_pred HcCCCc
Q 012321 425 EAHPKV 430 (466)
Q Consensus 425 ~~~p~V 430 (466)
++++.+
T Consensus 307 ~~~~~~ 312 (386)
T PRK07550 307 ARLPGW 312 (386)
T ss_pred HhCCCc
Confidence 886543
No 109
>PLN02187 rooty/superroot1
Probab=99.86 E-value=1.7e-19 Score=191.97 Aligned_cols=215 Identities=13% Similarity=0.146 Sum_probs=152.4
Q ss_pred hhHHHHHHHHHhhhC-------CCcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 210 PTTVVVEEKMSALEG-------AESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g-------~e~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
+....|++.+|++++ .++.|++++| +++|..++.+++++||+|++++|+|+.... .+...|+++..++
T Consensus 108 ~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~----~~~~~g~~~~~~~ 183 (462)
T PLN02187 108 AGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDA----RAAYSGLEVRKFD 183 (462)
T ss_pred CChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHH----HHHHcCCEEEEEe
Confidence 345667777777763 1344555555 599999999999999999999999998543 2344577766553
Q ss_pred -------CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chh-cc
Q 012321 282 -------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SL 346 (466)
Q Consensus 282 -------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl-~~ 346 (466)
..|+++|+++++++ +++|++++|+||||.+++ +++|+++|+++|+++|+||+|....+. .++ .+
T Consensus 184 l~~~~~~~~d~~~l~~~~~~~-~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~ 262 (462)
T PLN02187 184 LLPEKEWEIDLEGIEAIADEN-TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKF 262 (462)
T ss_pred CccccCCccCHHHHHHhcCCC-cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHh
Confidence 23789999998774 899999999999999986 778899999999999999998764321 111 11
Q ss_pred C---CcEEEeccccccccccCceEEEEEe-ChH----HHHHHHHHHHHhCC--CchHHHHHHHHHhh-----HHHHHHHH
Q 012321 347 G---ADLVLHSATKFIGGHNDVLAGSISG-SGK----LVTQIRNLHHVLGG--ALNPNAAYLIIRGM-----KTLHLRVQ 411 (466)
Q Consensus 347 g---aDivv~S~sK~lgG~gdv~gG~vvg-~~e----li~~l~~~~~~~G~--~ls~~~A~l~lrgL-----~tl~~R~e 411 (466)
. .-+++.|+||.|+.+|. +.||+++ +++ +++.+...+..++. ..+.+..+.+...+ +.+....+
T Consensus 263 ~~~~~vi~l~SfSK~f~~pGl-RiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~ 341 (462)
T PLN02187 263 ASIVPVLTLAGISKGWVVPGW-KIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNK 341 (462)
T ss_pred ccCCcEEEEecchhhcCCccc-eeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 1 24888999999999985 5788887 333 33456555554433 22343333332222 34566667
Q ss_pred HHHHHHHHHHHHHHcCCCc
Q 012321 412 QQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V 430 (466)
...++++.+.+.|+++|.+
T Consensus 342 ~l~~~r~~l~~~L~~~~~~ 360 (462)
T PLN02187 342 ILKHNVDLVCDRLKDIPCV 360 (462)
T ss_pred HHHHHHHHHHHHHhhCCCC
Confidence 7788899999999987654
No 110
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.86 E-value=1.3e-19 Score=188.01 Aligned_cols=169 Identities=20% Similarity=0.254 Sum_probs=134.7
Q ss_pred chhHHHHHHHHHhhhCCC-cEEEe-CCHHHHHHHHHHHh---ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 209 NPTTVVVEEKMSALEGAE-STVIM-ASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e-~~v~~-~SG~aAi~~al~al---l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
.+..+.+++.+++++|.+ ..+++ +++++++..++.++ +++||+|++.++.|.+.+..+...++..|+++.+++.
T Consensus 59 ~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~ 138 (397)
T TIGR01976 59 DQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVD 138 (397)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecc
Confidence 355789999999999963 33444 55557777766665 6899999999999988765555556667888877643
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEeccc
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~s 356 (466)
.|+++++++++++ +++|++++|+||||.+.|+++|.++||++|+++++|+++..+.. .+..++++|+++.|++
T Consensus 139 ~~~~~~~~~~l~~~i~~~-~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~ 217 (397)
T TIGR01976 139 EATGELHPDDLASLLSPR-TRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAY 217 (397)
T ss_pred ccCCCcCHHHHHHhcCCC-ceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEech
Confidence 3689999999874 99999999999999999999999999999999999999764422 3344578999999999
Q ss_pred cccccccCceEEEEEeChHHHHHHHH
Q 012321 357 KFIGGHNDVLAGSISGSGKLVTQIRN 382 (466)
Q Consensus 357 K~lgG~gdv~gG~vvg~~eli~~l~~ 382 (466)
|++|. ..|++++++++++.+..
T Consensus 218 K~~g~----~~G~l~~~~~~~~~l~~ 239 (397)
T TIGR01976 218 KFFGP----HMGILWGRPELLMNLPP 239 (397)
T ss_pred hhcCC----ceEEEEEcHHHHhhCCC
Confidence 99853 26889999888877653
No 111
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.85 E-value=2.1e-19 Score=181.03 Aligned_cols=254 Identities=20% Similarity=0.209 Sum_probs=182.1
Q ss_pred cCCccccCCCccCChHHHHHHHhcc--cCCCccCCCCchhHHHHHHHHHhhhCC---CcEEEeCCH-HHHHHHHHHHhcc
Q 012321 174 TTPVVNTSAYFFKKTAELIDFKEKR--RASFEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASG-MSASTVMLLALVP 247 (466)
Q Consensus 174 ~~Pi~~sst~~~~~~~~~~~~~~~~--~~~~~Y~R~~~p~~~~Lee~lA~l~g~---e~~v~~~SG-~aAi~~al~all~ 247 (466)
.-|+..+. ..|+.+.++.+.+..+ .+-|.|+-..+...+++.++.++.++. ++.++++.| +-++..+++.+.+
T Consensus 27 vlPmWVAD-MDf~~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~ 105 (388)
T COG1168 27 VLPMWVAD-MDFPTPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTK 105 (388)
T ss_pred cceeeeec-ccCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCc
Confidence 33555443 5566665444433221 244788844455889999999998875 455666555 4999999999999
Q ss_pred CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC--------CCCHHHHHHhccCCCceEEEEeCCCCCCcccc---cHH
Q 012321 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--------PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVK 316 (466)
Q Consensus 248 pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd--------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~---dl~ 316 (466)
+||.|++..|.|++.+..++. .|-++...+ ..|.++||+++...+++++++||||||+|++. +++
T Consensus 106 ~gd~Vvi~tPvY~PF~~~i~~----n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~ 181 (388)
T COG1168 106 PGDGVVIQTPVYPPFYNAIKL----NGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELR 181 (388)
T ss_pred CCCeeEecCCCchHHHHHHhh----cCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHH
Confidence 999999999999998766543 344443332 23899999999876689999999999999997 588
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCCccc----hh---c-c--CCcEEEeccccccccccCceEEEEEeChHHHHHH-HHHHH
Q 012321 317 LVSDLCHKKGAIVCIDGTFATPLNQK----AL---S-L--GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI-RNLHH 385 (466)
Q Consensus 317 ~I~ela~~~gillIvD~t~a~~~~~~----pl---~-~--gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l-~~~~~ 385 (466)
+|.++|.+||++||.||.++..++.. +. . . ..-|++.|.||+|+-.|...+-+|+.++++.++. +++..
T Consensus 182 ~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~ 261 (388)
T COG1168 182 KIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKR 261 (388)
T ss_pred HHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHH
Confidence 99999999999999999987643311 11 1 1 1238888999999988866666778888875554 34443
Q ss_pred HhCCCchHHH--HH-HH-HHhhHHHHHHHHHHHHHHHHHHHHHHcC-CCcEE
Q 012321 386 VLGGALNPNA--AY-LI-IRGMKTLHLRVQQQNSTALRMAKILEAH-PKVKR 432 (466)
Q Consensus 386 ~~G~~ls~~~--A~-l~-lrgL~tl~~R~e~~~~na~~La~~L~~~-p~V~~ 432 (466)
......+.+. |. .+ ..|-.+|+..++-...|.+.+++.|+++ |+|+.
T Consensus 262 ~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v 313 (388)
T COG1168 262 NGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKV 313 (388)
T ss_pred hcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 4444444432 22 12 4577888888889999999999999986 77753
No 112
>PLN02656 tyrosine transaminase
Probab=99.85 E-value=1.2e-19 Score=189.88 Aligned_cols=212 Identities=14% Similarity=0.131 Sum_probs=150.4
Q ss_pred hHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 211 TTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~g--------~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
....|+++++++++ .++.++++++++|+..++.+++++||+|++++|.|+..... ....|+++..++.
T Consensus 74 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~i~~ 149 (409)
T PLN02656 74 GLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELC----AAFRHLEVRYVDL 149 (409)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHH----HHHcCCEEEEEeC
Confidence 34566677766653 14455555556999999999999999999999999864322 2335776666542
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCcc----chh-c--
Q 012321 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-S-- 345 (466)
Q Consensus 283 -------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~---dl~~I~ela~~~gillIvD~t~a~~~~~----~pl-~-- 345 (466)
.|+++++++++++ +++|++++|+||||.++ ++++|+++|+++|+++|+|++|...... .++ .
T Consensus 150 ~~~~~~~~d~~~l~~~~~~~-~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 228 (409)
T PLN02656 150 LPEKGWEVDLDAVEALADQN-TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFG 228 (409)
T ss_pred CCcCCCCCCHHHHHHHhccC-ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhc
Confidence 3789999988774 89999999999999997 5788999999999999999998754321 111 1
Q ss_pred -cCCcEEEeccccccccccCceEEEEEeC--------hHHHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHH
Q 012321 346 -LGADLVLHSATKFIGGHNDVLAGSISGS--------GKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQ 411 (466)
Q Consensus 346 -~gaDivv~S~sK~lgG~gdv~gG~vvg~--------~eli~~l~~~~~~~G~~ls~~~A~l~lrgL-----~tl~~R~e 411 (466)
...-|++.|+||.|+.+| .+.||++++ +++++++.......+ ..+...++.+...+ +.+....+
T Consensus 229 ~~~~vi~~~SfSK~f~~pG-lRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~~~~~~ 306 (409)
T PLN02656 229 SIVPVLTLGSLSKRWIVPG-WRLGWFVTTDPSGSFRDPKIVERIKKYFDILG-GPATFIQAAVPTILEQTDESFFKKTIN 306 (409)
T ss_pred ccCcEEEEcccchhccCcc-eeEEEEEEeCcccccccHHHHHHHHHHHhhhc-CCCHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 123488999999999888 467888873 578888877655433 23343333333333 23555566
Q ss_pred HHHHHHHHHHHHHHcCCC
Q 012321 412 QQNSTALRMAKILEAHPK 429 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~ 429 (466)
+..++++.+.+.|++++.
T Consensus 307 ~~~~~r~~~~~~L~~~~~ 324 (409)
T PLN02656 307 ILKQSSDICCDRIKEIPC 324 (409)
T ss_pred HHHHHHHHHHHHHhhCCC
Confidence 677788888899988754
No 113
>PLN02483 serine palmitoyltransferase
Probab=99.85 E-value=1.4e-19 Score=193.87 Aligned_cols=211 Identities=17% Similarity=0.228 Sum_probs=163.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~L 288 (466)
.+..++||+++|+++|.++++++++|+.++..++.+++++||+|+++++.|.+... .++..|+++..++..|.+++
T Consensus 145 ~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~----~~~~~Ga~v~~~~~~d~~~l 220 (489)
T PLN02483 145 TKLHRELEELVARFVGKPAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHH----HHHHcCCeEEEEeCCCHHHH
Confidence 67899999999999999999999999988888889999999999999999998653 34557888888887788877
Q ss_pred HHhccC------CCc-----e-EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-------c--hh-cc
Q 012321 289 EAALNN------NNV-----S-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------K--AL-SL 346 (466)
Q Consensus 289 e~ai~~------~~t-----k-lV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~-------~--pl-~~ 346 (466)
++.+++ .++ + +|+++...|++|.+.++++|.++|+++|+++++||+++.+... . .. ..
T Consensus 221 e~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~ 300 (489)
T PLN02483 221 EEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPA 300 (489)
T ss_pred HHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcc
Confidence 776541 112 4 6677777799999999999999999999999999998643221 0 11 13
Q ss_pred CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHH---------HHHHHHHHHH
Q 012321 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKT---------LHLRVQQQNS 415 (466)
Q Consensus 347 gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~t---------l~~R~e~~~~ 415 (466)
+.||++.|+||++++. ||++++++++++.++.... .++..+++..+..++..++. ...++++..+
T Consensus 301 ~~dI~~~SfSKs~g~~----GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~ 376 (489)
T PLN02483 301 DVDIMMGTFTKSFGSC----GGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRE 376 (489)
T ss_pred cCcEEEEecchhcccC----ceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHH
Confidence 5789999999999875 5999999999999886543 23434444433333334432 2346678889
Q ss_pred HHHHHHHHHHcC
Q 012321 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+++.+.+.|+++
T Consensus 377 ~~~~l~~~L~~~ 388 (489)
T PLN02483 377 NSNFFRSELQKM 388 (489)
T ss_pred HHHHHHHHHHHC
Confidence 999999999986
No 114
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.85 E-value=6.3e-20 Score=191.82 Aligned_cols=210 Identities=22% Similarity=0.252 Sum_probs=157.9
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHH
Q 012321 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~--pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~ 287 (466)
+...+||++|++++|.+++++++||++|+..++..+.. +||.|+++...|...+. .+...|.++..+...|.+.
T Consensus 91 ~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~----~~~~~g~~~~~~~~~d~~~ 166 (410)
T PRK13392 91 HPHVLLERELADLHGKESALLFTSGYVSNDAALSTLGKLLPGCVILSDALNHASMIE----GIRRSGAEKQVFRHNDLAD 166 (410)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHH----HHHHcCCeEEEEeCCCHHH
Confidence 46789999999999999999999999998888876653 89988887777766543 2344577766666566666
Q ss_pred HHHhcc---CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---------hhccCCcEEEecc
Q 012321 288 LEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHSA 355 (466)
Q Consensus 288 Le~ai~---~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~---------pl~~gaDivv~S~ 355 (466)
+++.++ ..++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+.... .+....|+++.|+
T Consensus 167 l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tl 246 (410)
T PRK13392 167 LEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTL 246 (410)
T ss_pred HHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEC
Confidence 666553 2258999999999999999999999999999999999999987543211 1112468999999
Q ss_pred ccccccccCceEEEEEeChHHHHHHHHHHHH--hCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 356 sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~--~G~~ls~~~A~l~---lrgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
+|++++. ||++++++++++.+++.... ++...++..++.+ ++.++....+.+++.++++++.+.|++.
T Consensus 247 sK~~g~~----GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (410)
T PRK13392 247 AKAFGCL----GGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN 319 (410)
T ss_pred hHhhhcc----cchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999875 48999999999988876543 2344444444433 4444444455677788899999999874
No 115
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.85 E-value=1.3e-19 Score=187.56 Aligned_cols=212 Identities=24% Similarity=0.265 Sum_probs=169.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
.+....||+.+++++|.+.+++++||++|+.+++.++ +++||+|+++.+.|..+... +...|+++.++|.
T Consensus 28 g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~----~~~~G~~~~~~~~~~~~~ 103 (380)
T TIGR03588 28 GPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANC----ALYCGAKVDFVDIDPDTG 103 (380)
T ss_pred ChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHH----HHHcCCEEEEEecCCCcC
Confidence 5778999999999999999999999999999999998 89999999999999886533 3456888887764
Q ss_pred -CCHHHHHHhcc----CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCC----cEEEe
Q 012321 283 -ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA----DLVLH 353 (466)
Q Consensus 283 -~D~e~Le~ai~----~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~ga----Divv~ 353 (466)
.|+++++++++ + +|++|++ +|++|...|+++|.++|+++|++||+|++++.+...+....|. |+++.
T Consensus 104 ~~d~~~l~~~i~~~~~~-~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 104 NIDEDALEKKLAAAKGK-LPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVF 179 (380)
T ss_pred CcCHHHHHHHhhcccCC-CceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEE
Confidence 37899999998 4 4899885 5678999999999999999999999999988764333333344 99999
Q ss_pred ccc--cccccccCceEEEEEe-ChHHHHHHHHHHHH-----------------------h--CCCchHHHHHHHHHhhHH
Q 012321 354 SAT--KFIGGHNDVLAGSISG-SGKLVTQIRNLHHV-----------------------L--GGALNPNAAYLIIRGMKT 405 (466)
Q Consensus 354 S~s--K~lgG~gdv~gG~vvg-~~eli~~l~~~~~~-----------------------~--G~~ls~~~A~l~lrgL~t 405 (466)
|++ |+++.+ .||+++. ++++.++++..+.. . +..++.+.+.+.+..|+.
T Consensus 180 S~~~~K~~~~~---~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~ 256 (380)
T TIGR03588 180 SFHPVKIITTA---EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKK 256 (380)
T ss_pred ecCCCCccccc---CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHH
Confidence 987 889764 3677766 46777777654320 1 123456677777778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcE
Q 012321 406 LHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 406 l~~R~e~~~~na~~La~~L~~~p~V~ 431 (466)
++.++++.+++++++.+.|.+.|.+.
T Consensus 257 l~~~~~~r~~~~~~~~~~L~~~~~~~ 282 (380)
T TIGR03588 257 LDRFVAKRREIAARYDRLLKDLPYFT 282 (380)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 99999999999999999999987653
No 116
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=6.1e-20 Score=189.80 Aligned_cols=219 Identities=15% Similarity=0.210 Sum_probs=154.3
Q ss_pred CCCchhHHHHHHHHHhhhC--------C-CcEEEeCCHH-HHHHHHHHHhccCCC-EEEEcCCCccchHHHHHhhcccCC
Q 012321 206 RYGNPTTVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGG-HIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g--------~-e~~v~~~SG~-aAi~~al~all~pGD-~VLv~~~~y~~t~~~~~~~l~~~g 274 (466)
+|+++....|++.|+++++ . ++.|++++|+ +++..++.+++.+|| +|++++|+|..... .++..|
T Consensus 62 ~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~----~~~~~g 137 (374)
T PRK02610 62 RYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGI----LAQTLG 137 (374)
T ss_pred CCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHH----HHHHcC
Confidence 4445566788899998876 2 3456677776 888888888888886 89999999987553 345567
Q ss_pred cEEEEeC------CCCHHHHHHhccC---CCceEEEEeCCCCCCcccccHHHHHHHHHh-cCCEEEEeCCCCCCCccch-
Q 012321 275 ITATVID------PADMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKA- 343 (466)
Q Consensus 275 i~v~~vd------~~D~e~Le~ai~~---~~tklV~lesPsNPtG~v~dl~~I~ela~~-~gillIvD~t~a~~~~~~p- 343 (466)
+++..++ ..|+++|++++++ .++++|++++|+||||.+++.+++.++++- +++++|+||+|........
T Consensus 138 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~ 217 (374)
T PRK02610 138 IPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLV 217 (374)
T ss_pred CEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchH
Confidence 7776654 3478999988864 359999999999999999987766666532 4899999999875422111
Q ss_pred --hc-cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHH---HHHHhhHHHHHHHHHHHHHH
Q 012321 344 --LS-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAY---LIIRGMKTLHLRVQQQNSTA 417 (466)
Q Consensus 344 --l~-~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~---l~lrgL~tl~~R~e~~~~na 417 (466)
+. ...-|++.|+||.++.+| ++.||+++++++++++.+.+..++ .+.+... .++...+.+..++++..+.+
T Consensus 218 ~~~~~~~~~ivi~SfSK~~g~~G-lRiG~~v~~~~l~~~l~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r 294 (374)
T PRK02610 218 GELAQHPNWVILRTFSKAFRLAA-HRVGYAIGHPELIAVLEKVRLPYN--LPSFSQLAAQLALEHRQELLAAIPEILQER 294 (374)
T ss_pred HHHhcCCCEEEEEecchhccCcc-cceeeeecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 11 112488999999999888 568999999999999887664333 3333333 33333334444555556667
Q ss_pred HHHHHHHHcCCCcE
Q 012321 418 LRMAKILEAHPKVK 431 (466)
Q Consensus 418 ~~La~~L~~~p~V~ 431 (466)
..+.+.|++++.+.
T Consensus 295 ~~l~~~L~~~~~~~ 308 (374)
T PRK02610 295 DRLYQALQELPQLR 308 (374)
T ss_pred HHHHHHHHhCCCcE
Confidence 77888888876653
No 117
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.85 E-value=1.6e-20 Score=193.91 Aligned_cols=213 Identities=15% Similarity=0.200 Sum_probs=155.7
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
+|+++....|++.|+++++. .+.|++++|+ +++..++.+++++||+|++++|+|..... .+...|+++..++.
T Consensus 60 ~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~----~~~~~g~~v~~v~~~ 135 (366)
T PRK01533 60 LYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRH----HAIIEGCEVKEVALN 135 (366)
T ss_pred cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHH----HHHHcCCEEEEeecC
Confidence 35556677899999999986 4567777776 89999999999999999999999987553 34456777776643
Q ss_pred ---CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHH---hcCCEEEEeCCCCCCCcc----chh----ccCC
Q 012321 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH---KKGAIVCIDGTFATPLNQ----KAL----SLGA 348 (466)
Q Consensus 283 ---~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~---~~gillIvD~t~a~~~~~----~pl----~~ga 348 (466)
.|+++|+++++++ +++|++++|+||||.+++.+++.++++ +++ ++|+||+|...... ..+ ..+.
T Consensus 136 ~~~~d~~~l~~~~~~~-~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~ 213 (366)
T PRK01533 136 NGVYDLDEISSVVDND-TKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKN 213 (366)
T ss_pred CCCcCHHHHHHHhCcC-CcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCC
Confidence 4799999998764 899999999999999998766666554 444 67889998643211 111 1234
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L~ 425 (466)
.|++.|+||.++.+|. +.||+++++++++++++.+.. ...+.+....+...+ +.+....+...++++++.+.|+
T Consensus 214 vi~~~SfSK~~~l~Gl-RiG~~i~~~~~~~~l~~~~~~--~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~ 290 (366)
T PRK01533 214 ILVLRTFSKAYGLASF-RVGYAVGHEELIEKLNVVRLP--FNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCK 290 (366)
T ss_pred EEEEeCchHHhcChHH-HHhHHhCCHHHHHHHHHhcCC--CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999998884 578999999999998876533 345555544444443 3344444555667777888887
Q ss_pred cC
Q 012321 426 AH 427 (466)
Q Consensus 426 ~~ 427 (466)
.+
T Consensus 291 ~~ 292 (366)
T PRK01533 291 EN 292 (366)
T ss_pred hC
Confidence 65
No 118
>PLN02368 alanine transaminase
Probab=99.85 E-value=1.4e-19 Score=189.69 Aligned_cols=214 Identities=14% Similarity=0.152 Sum_probs=148.8
Q ss_pred HHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHhc-cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC--
Q 012321 213 VVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-- 281 (466)
Q Consensus 213 ~~Lee~lA~l~----g~---e~~v~~~SG~-aAi~~al~all-~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd-- 281 (466)
..|++.+++++ |. ++.|++++|. +++..++.+++ ++||+|++++|+|+.....+ ...|.++..++
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~----~~~g~~~v~v~~~ 185 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATI----SLLGGTLVPYYLE 185 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHH----HHcCCEEEEEecc
Confidence 34555555543 53 3456666665 89999999888 79999999999999866443 34455555442
Q ss_pred -----CCCHHHHHHhccC-----CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----ch
Q 012321 282 -----PADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KA 343 (466)
Q Consensus 282 -----~~D~e~Le~ai~~-----~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~p 343 (466)
..|+++|++++++ .++|+|++++|+||||.+++ +++|+++|+++|+++|+||+|...... .+
T Consensus 186 ~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s 265 (407)
T PLN02368 186 ESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFIS 265 (407)
T ss_pred cccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccc
Confidence 3578999998863 14899999999999999986 567888899999999999998664321 11
Q ss_pred -h----c-------cCCcEEEecccccc-ccccCceEEEEE---eChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---
Q 012321 344 -L----S-------LGADLVLHSATKFI-GGHNDVLAGSIS---GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK--- 404 (466)
Q Consensus 344 -l----~-------~gaDivv~S~sK~l-gG~gdv~gG~vv---g~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~--- 404 (466)
. . .+.-|+++|+||.| +.+|+ +.||++ +++++++++.+.... ..+.+.+..+.+...++
T Consensus 266 ~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~Gl-RiGy~i~~~~~~~li~~~~~~~~~-~~~~~~~~Q~aa~~~l~~~~ 343 (407)
T PLN02368 266 AKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQ-RGGYFEMTNIPPKTVEEIYKVASI-ALSPNVSGQIFMGLMVNPPK 343 (407)
T ss_pred HHHHHhhhcccccccceEEEEecCCcccccCCcc-ceEEEEEeCCCHHHHHHHHHHhcc-cCCCCcHHHHHHHHHhCCCC
Confidence 1 1 11348889999998 67775 578887 488899988876432 22333333333333222
Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHcCCCcEE
Q 012321 405 -----------TLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 405 -----------tl~~R~e~~~~na~~La~~L~~~p~V~~ 432 (466)
.+...++...++++.+.+.|+++|++..
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~ 382 (407)
T PLN02368 344 PGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVC 382 (407)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEe
Confidence 1233456778888999999999887643
No 119
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.85 E-value=2.4e-19 Score=186.37 Aligned_cols=210 Identities=17% Similarity=0.209 Sum_probs=151.2
Q ss_pred HHHHHHHHHhhh----C----C--CcEEEeCCHH-HHHHHHHHHhccCCCE--EEEcCCCccchHHHHHhhcccCCcEEE
Q 012321 212 TVVVEEKMSALE----G----A--ESTVIMASGM-SASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 212 ~~~Lee~lA~l~----g----~--e~~v~~~SG~-aAi~~al~all~pGD~--VLv~~~~y~~t~~~~~~~l~~~gi~v~ 278 (466)
...|++++++++ | . ++.+++++|+ +++..++.+++++||+ |++++|+|...... +...|+++.
T Consensus 66 ~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~----~~~~g~~~~ 141 (393)
T TIGR03538 66 LPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGA----ALLAGAEPY 141 (393)
T ss_pred CHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHH----HHhcCCeEE
Confidence 345666666654 3 2 2457777776 9999999999999986 99999999875533 344566666
Q ss_pred EeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc---ch--
Q 012321 279 VIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---KA-- 343 (466)
Q Consensus 279 ~vd~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~---~p-- 343 (466)
.++. .|++++++++.+ ++|+|++++|+||||.+++ +++|+++|++++++||+||+|...... .+
T Consensus 142 ~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~ 220 (393)
T TIGR03538 142 FLNCTAENGFLPDFDAVPESVWR-RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAG 220 (393)
T ss_pred EeeccccCCCCCCHHHHHHHHhh-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcC
Confidence 6542 367889888866 4899999999999999997 678888899999999999998754321 11
Q ss_pred -h----ccC-----CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHH
Q 012321 344 -L----SLG-----ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRV 410 (466)
Q Consensus 344 -l----~~g-----aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~ 410 (466)
. ..+ .-|++.|+||.++.+| .+.||+++++++++++.+.....+...+...++.+...+ +.+....
T Consensus 221 ~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G-lRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 299 (393)
T TIGR03538 221 LLQAAAQLGRDDFRRCLVFHSLSKRSNLPG-LRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENR 299 (393)
T ss_pred HHHhcccccccccccEEEEecchhhcCCcc-cceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHH
Confidence 1 112 2389999999988887 467999999999999887776555555554444433333 2344455
Q ss_pred HHHHHHHHHHHHHHHcC
Q 012321 411 QQQNSTALRMAKILEAH 427 (466)
Q Consensus 411 e~~~~na~~La~~L~~~ 427 (466)
+...++...+.+.|+++
T Consensus 300 ~~~~~~~~~~~~~L~~~ 316 (393)
T TIGR03538 300 ALYREKFAAVLEILGQV 316 (393)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 56677777788888764
No 120
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.85 E-value=1.9e-19 Score=185.78 Aligned_cols=218 Identities=17% Similarity=0.168 Sum_probs=164.0
Q ss_pred CccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
|.+.+...+.++++++++++++|.+..+++++|++++..++.+++++||.|++.++.|+.....+ ...|+++..++
T Consensus 70 ~~~~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~----~~~g~~~~~~~ 145 (385)
T TIGR01825 70 VRTIAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGL----RLTKATKKIYK 145 (385)
T ss_pred cCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHH----HhcCCceEEeC
Confidence 44445556789999999999999888999999999988888899999999999999998764332 23466666677
Q ss_pred CCCHHHHHHhccCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---------chhccCCc
Q 012321 282 PADMEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGAD 349 (466)
Q Consensus 282 ~~D~e~Le~ai~~~---~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~---------~pl~~gaD 349 (466)
..|++++++.+.+. ++++|+++++.||+|.+.|+++|.++|++||+++|+|++|..+... .....+.|
T Consensus 146 ~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (385)
T TIGR01825 146 HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVD 225 (385)
T ss_pred CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCc
Confidence 77888888877531 4899999999999999999999999999999999999998654321 11234578
Q ss_pred EEEeccccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHH
Q 012321 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 350 ivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~tl---~~R~e~~~~na~~La~~L 424 (466)
+++.|+||++++. +|++++++++++.+..... .++....+...+.+...++.+ ....++..++++.+.+.|
T Consensus 226 i~~~s~sK~~~~~----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L 301 (385)
T TIGR01825 226 IQVGTLSKAIGVV----GGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGL 301 (385)
T ss_pred EEEEeccHHhhcC----CCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999764 4899999999988876532 223333444333333344332 234566677888888888
Q ss_pred HcC
Q 012321 425 EAH 427 (466)
Q Consensus 425 ~~~ 427 (466)
++.
T Consensus 302 ~~~ 304 (385)
T TIGR01825 302 GKL 304 (385)
T ss_pred HHc
Confidence 774
No 121
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.85 E-value=2e-19 Score=188.38 Aligned_cols=218 Identities=15% Similarity=0.189 Sum_probs=152.0
Q ss_pred CCCch-hHHHHHHHHHhhhC------------C-CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhc
Q 012321 206 RYGNP-TTVVVEEKMSALEG------------A-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVL 270 (466)
Q Consensus 206 R~~~p-~~~~Lee~lA~l~g------------~-e~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l 270 (466)
+|+++ ....|++.++++++ . ++.+++++| ++++..++.+++++||+|+++.|+|..... .+
T Consensus 70 ~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~----~~ 145 (412)
T PTZ00433 70 GYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET----VC 145 (412)
T ss_pred CCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH----HH
Confidence 34444 35678888887764 1 344555555 599999999999999999999999988553 34
Q ss_pred ccCCcEEEEeC-------CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc
Q 012321 271 PKMGITATVID-------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN 340 (466)
Q Consensus 271 ~~~gi~v~~vd-------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~ 340 (466)
+..|+++..++ ..|+++|+++++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|.....
T Consensus 146 ~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~-~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~ 224 (412)
T PTZ00433 146 KAYGIEMRFYNCRPEKDWEADLDEIRRLVDDR-TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVF 224 (412)
T ss_pred HHcCCEEEEEecCccccCcCCHHHHHHHhccC-ceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccccccc
Confidence 45677766654 34689999988774 999999999999999875 67789999999999999999875432
Q ss_pred cc----h-hcc---CCcEEEeccccccccccCceEEEEEe------ChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---
Q 012321 341 QK----A-LSL---GADLVLHSATKFIGGHNDVLAGSISG------SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM--- 403 (466)
Q Consensus 341 ~~----p-l~~---gaDivv~S~sK~lgG~gdv~gG~vvg------~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL--- 403 (466)
.. + ..+ ..-+++.|+||.++.+| .+.||+++ .+++++.++...... ...+...+..+...+
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG-lRlG~~i~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~q~a~~~~l~~~ 302 (412)
T PTZ00433 225 NGATFTSVADFDTTVPRVILGGTAKNLVVPG-WRLGWLLLVDPHGNGGDFLDGMKRLGMLV-CGPCSVVQAALGEALLNT 302 (412)
T ss_pred CCCCccchhhccCCCceEEEccchhhcCCCC-eeEEEEEEeCCcccHHHHHHHHHHHhhcc-CCCChHHHHHHHHHHhcC
Confidence 11 1 111 12378899999998887 46788886 245777776654322 233444333322222
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012321 404 --KTLHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 404 --~tl~~R~e~~~~na~~La~~L~~~p~V 430 (466)
+.+....++..++.+.+.+.|+++..+
T Consensus 303 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 331 (412)
T PTZ00433 303 PQEHLEQIVAKLEEGAMVLYNHIGECIGL 331 (412)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 334555566778888899999876443
No 122
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.85 E-value=3.2e-19 Score=184.42 Aligned_cols=219 Identities=16% Similarity=0.195 Sum_probs=153.5
Q ss_pred CCCCch-hHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 205 GRYGNP-TTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 205 ~R~~~p-~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
..|+.+ ...+|++++++++|. ++.++++++++++..++.+++.+||+|++++|.|..... .++..|.++..++
T Consensus 60 ~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~v~ 135 (380)
T PRK06225 60 CKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDN----FASRFGAEVIEVP 135 (380)
T ss_pred CCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHHhCceEEeec
Confidence 344444 368899999999986 456666777799999999999999999999999986443 3344566665553
Q ss_pred C--------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----hhcc
Q 012321 282 P--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----ALSL 346 (466)
Q Consensus 282 ~--------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~----pl~~ 346 (466)
. .|++++++.++++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... ....
T Consensus 136 ~~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 214 (380)
T PRK06225 136 IYSEECNYKLTPELVKENMDEN-TRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAP 214 (380)
T ss_pred cccccCCccCCHHHHHhhcCCC-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCC
Confidence 1 4789999999875 999999999999999875 8899999999999999999974321111 1112
Q ss_pred CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---HHHHHH-HHHHHHHHHHHH
Q 012321 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRV-QQQNSTALRMAK 422 (466)
Q Consensus 347 gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~---tl~~R~-e~~~~na~~La~ 422 (466)
...+++.|+||+++.+| .+.|+++++++++++++..... ....+...+..+...++ .+..++ +..+++...+.+
T Consensus 215 ~~~i~~~s~SK~~g~~G-~RiG~i~~~~~l~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~ 292 (380)
T PRK06225 215 EHTVTSYSFSKIFGMAG-LRIGAVVATPDLIEVVKSIVIN-DLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKE 292 (380)
T ss_pred CCEEEEeechhhcCCcc-ceeEEEecCHHHHHHHHHHHhc-ccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 34588999999997666 5689999999999888765431 12223333333222222 222222 233455666778
Q ss_pred HHHcCCCc
Q 012321 423 ILEAHPKV 430 (466)
Q Consensus 423 ~L~~~p~V 430 (466)
.|++++.+
T Consensus 293 ~L~~~~~~ 300 (380)
T PRK06225 293 AVDEIEGV 300 (380)
T ss_pred HHHhCcCC
Confidence 88876553
No 123
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.85 E-value=8.6e-20 Score=185.68 Aligned_cols=205 Identities=19% Similarity=0.239 Sum_probs=147.0
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCH
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~ 285 (466)
|+++. ..|++.|++.+|.++ |++++|+ ++|.+++ .+.+||+|++++|+|+.... .++..|+++..++.
T Consensus 47 yp~~~-~~Lr~~ia~~~~~~~-I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~~----~~~~~g~~~~~v~~--- 115 (330)
T PRK05664 47 LPETD-DGLEAAARAYYGAPQ-LLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHAH----AWRRAGHQVRELDE--- 115 (330)
T ss_pred CCCCh-HHHHHHHHHHhCCCC-EEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHHH----HHHHcCCeEEEech---
Confidence 44444 799999999999865 5555555 8888775 45799999999999998653 44567888887764
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCccch---hc-cCCcEEEeccccc
Q 012321 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQKA---LS-LGADLVLHSATKF 358 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesPsNPtG~v~dl---~~I~ela~~~gillIvD~t~a~~~~~~p---l~-~gaDivv~S~sK~ 358 (466)
++++++++ +++++++++|+||||.+++. ++|+++|+++|+++|+||+|.......+ +. ...-+++.|+||.
T Consensus 116 ~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~ 193 (330)
T PRK05664 116 AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKF 193 (330)
T ss_pred hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeecccc
Confidence 45666664 37899999999999999975 5566667889999999999865432111 11 1223899999999
Q ss_pred cccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 359 IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 359 lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
++.+| .+.||+++++++++.+......++ .+....+.+...| .......++..++++.+.+.|+++
T Consensus 194 ~gl~G-lRiG~~v~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 262 (330)
T PRK05664 194 FGLAG-ARLGFVLAEPALLRALAELLGPWT--VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH 262 (330)
T ss_pred ccCCC-cceEEEEeCHHHHHHHHHhcCCCC--CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99887 467999999999999887654332 2333333333333 334444566677888899999886
No 124
>PRK10534 L-threonine aldolase; Provisional
Probab=99.85 E-value=1.9e-19 Score=182.45 Aligned_cols=216 Identities=17% Similarity=0.224 Sum_probs=154.9
Q ss_pred CCC-CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccC-CcEEEEeC-
Q 012321 205 GRY-GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM-GITATVID- 281 (466)
Q Consensus 205 ~R~-~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~-gi~v~~vd- 281 (466)
.+| ++|...+|++.|++++|.+..+++++|++++...+.+++.+||+|+++.+.|...+... ..... ++++..++
T Consensus 28 ~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 105 (333)
T PRK10534 28 DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEAG--GAAVLGSIQPQPIDA 105 (333)
T ss_pred cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcCC--chHHhcCceEEeecC
Confidence 455 78999999999999999988899999999998888888999999999887775322110 01111 24444442
Q ss_pred ----CCCHHHHHHhccCC-----CceEEEEeCCCCCCcccccHH---HHHHHHHhcCCEEEEeCCCCCCC------ccch
Q 012321 282 ----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPL------NQKA 343 (466)
Q Consensus 282 ----~~D~e~Le~ai~~~-----~tklV~lesPsNPtG~v~dl~---~I~ela~~~gillIvD~t~a~~~------~~~p 343 (466)
..|+++|+++++++ ++++|++++|+| |.+.+.+ +|.++|+++|++|++||+|.... ....
T Consensus 106 ~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~--G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~ 183 (333)
T PRK10534 106 AADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHN--GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKE 183 (333)
T ss_pred CCCCCCCHHHHHHhhcccCcCcccceEEEEecCCC--CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHH
Confidence 23799999998652 489999998774 9998765 55678899999999999865210 0111
Q ss_pred hccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCch--HHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 012321 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN--PNAAYLIIRGMKTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 344 l~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls--~~~A~l~lrgL~tl~~R~e~~~~na~~La 421 (466)
.....|.++.|+||.++.. +||++++++++++++++++..++..++ ...+..+...++....++++..++++++.
T Consensus 184 ~~~~~~~~~~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~ 260 (333)
T PRK10534 184 ITQYCDSFTICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLA 260 (333)
T ss_pred HHhcCCEEEEEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 1223576677999988864 466889999999999988876664433 23344444455554566677777888999
Q ss_pred HHHHcC
Q 012321 422 KILEAH 427 (466)
Q Consensus 422 ~~L~~~ 427 (466)
+.|+++
T Consensus 261 ~~L~~~ 266 (333)
T PRK10534 261 EQLREA 266 (333)
T ss_pred HHHHhC
Confidence 999986
No 125
>PRK09105 putative aminotransferase; Provisional
Probab=99.85 E-value=7e-20 Score=189.39 Aligned_cols=212 Identities=17% Similarity=0.194 Sum_probs=153.3
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
+|+.+...+|++.+++.+|. ++.|++++|+ +++..++.+++++||+|++++|.|+.... .++..|+++..++.
T Consensus 74 ~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~----~~~~~g~~~~~v~~~ 149 (370)
T PRK09105 74 RYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWR----AADAQGAPVAKVPLR 149 (370)
T ss_pred CCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHH----HHHHcCCeEEEecCC
Confidence 45555688999999999985 4455555555 99999999999999999999999988653 34456777766642
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcc-chh---ccCC-cEE
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ-KAL---SLGA-DLV 351 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~--~gillIvD~t~a~~~~~-~pl---~~ga-Div 351 (466)
.|++++++. .+ ++++|++++|+||||.+.+.++|.++++. +++++|+||+|...... ... ..+. -++
T Consensus 150 ~~~~~d~~~l~~~-~~-~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~ 227 (370)
T PRK09105 150 ADGAHDVKAMLAA-DP-NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIV 227 (370)
T ss_pred CCCCCCHHHHHhc-CC-CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEE
Confidence 467888876 34 48999999999999999998888887754 48999999998532211 111 1222 378
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~---lrgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
+.|+||.+|.+|. +.||++++++++++++.. . ....+......+ +...+.+..+.++..++++.+.+.|+++
T Consensus 228 ~~SfSK~~g~~Gl-RiG~~v~~~~~i~~l~~~-~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 302 (370)
T PRK09105 228 LRTFSKLYGMAGM-RLGLAAARPDLLAKLARF-G--HNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK 302 (370)
T ss_pred EecccHhhcCCcc-ceeeeecCHHHHHHHHhc-C--CCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8999999998884 579999999999888765 1 122333322222 3333445555667778888899999875
No 126
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.85 E-value=1.6e-19 Score=186.54 Aligned_cols=212 Identities=17% Similarity=0.174 Sum_probs=160.2
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~L 288 (466)
.+.++++++.+++++|.++.+++++|++++..++.+++++||+|+++++.|+.....+ ...+.++..++..|++++
T Consensus 86 ~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~l 161 (397)
T PRK06939 86 QDLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGV----RLCKAKRYRYANNDMADL 161 (397)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHH----HhcCCceEEeCCCCHHHH
Confidence 4678899999999999888999999999999999999999999999999998865433 233555555666788888
Q ss_pred HHhccC---C--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc----h-----hccCCcEEEec
Q 012321 289 EAALNN---N--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK----A-----LSLGADLVLHS 354 (466)
Q Consensus 289 e~ai~~---~--~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~----p-----l~~gaDivv~S 354 (466)
++.+++ . ++++|++++..|++|.+.++++|.++|+++|+++|+|++|..+.... . +..+.|+++.|
T Consensus 162 ~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S 241 (397)
T PRK06939 162 EAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGT 241 (397)
T ss_pred HHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEE
Confidence 888753 1 48899988889999999999999999999999999999996433211 1 11246899999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~tl---~~R~e~~~~na~~La~~L~~~ 427 (466)
+||+++|+ ++||+++++++++.++.... .++....+..++.+...++.+ ..+.++..++++.+.+.|+++
T Consensus 242 ~sK~~~g~---r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 316 (397)
T PRK06939 242 LGKALGGA---SGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA 316 (397)
T ss_pred CHHHhCcc---CceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999654 47999999999988876432 123333343333333333333 345566778888888888875
No 127
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.85 E-value=1.7e-19 Score=194.44 Aligned_cols=213 Identities=13% Similarity=0.157 Sum_probs=144.2
Q ss_pred HHHHHHHHHhhh------CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 212 TVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~lA~l~------g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
...|++.|++++ +. ++.|++++|+ +++.+++.+++++||+|++++|.|...... +...|.++..++.
T Consensus 187 ~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~----~~~~g~~~v~~~~~ 262 (517)
T PRK13355 187 LFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTAC----VNLAGGTAVHYRCD 262 (517)
T ss_pred hHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHH----HHHCCCEEEEeecC
Confidence 667777777776 22 3456666665 899999999999999999999999875533 3345666555431
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----chhccCC
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSLGA 348 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~pl~~ga 348 (466)
.|+++++++++++ +++|++++|+||||.+++ +++|+++|++|+++||+||+|...... ....+..
T Consensus 263 ~~~~~~~d~~~l~~~~~~~-~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~ 341 (517)
T PRK13355 263 EQSEWYPDIDDIRSKITSR-TKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAP 341 (517)
T ss_pred cccCCCCCHHHHHHhcCcC-ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCC
Confidence 4789999999874 999999999999999997 788999999999999999998753321 1122222
Q ss_pred c---EEEeccccccccccCceEEEEE--eChHH----HHHHHHHHHHhCCCchHHHHHHHHHhhH---HHHH---HHHHH
Q 012321 349 D---LVLHSATKFIGGHNDVLAGSIS--GSGKL----VTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHL---RVQQQ 413 (466)
Q Consensus 349 D---ivv~S~sK~lgG~gdv~gG~vv--g~~el----i~~l~~~~~~~G~~ls~~~A~l~lrgL~---tl~~---R~e~~ 413 (466)
| +++.|+||.++.+|+. .||++ +++++ ++.+..... ...+.+....+++...|+ .+.. ..++.
T Consensus 342 ~~~vi~~~S~SK~~~~~G~R-iG~~i~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~ 419 (517)
T PRK13355 342 DLFCVTFSGLSKSHMIAGYR-IGWMILSGNKRIAKDYIEGLNMLAN-MRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRV 419 (517)
T ss_pred CCeEEEEecchhhccCcccc-eEEEEeeCchhhHHHHHHHHHHHhc-CcCCcChHHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 2 4469999999988854 67877 44544 333332222 222233333333333322 1111 22345
Q ss_pred HHHHHHHHHHHHcCCCcE
Q 012321 414 NSTALRMAKILEAHPKVK 431 (466)
Q Consensus 414 ~~na~~La~~L~~~p~V~ 431 (466)
.++++.+.+.|++.|++.
T Consensus 420 ~~~r~~l~~~L~~~~g~~ 437 (517)
T PRK13355 420 YEQRELVYNALNAIPGIS 437 (517)
T ss_pred HHHHHHHHHHHhcCCCcc
Confidence 566788899998876653
No 128
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.85 E-value=2.3e-19 Score=182.46 Aligned_cols=213 Identities=19% Similarity=0.209 Sum_probs=168.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
.+|...++|+.+++++|.+++++++||++|+..++.++ +++||+|+++.+.|.++...+ ...|+++.+++.
T Consensus 16 ~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~ 91 (352)
T cd00616 16 LGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAI----LLLGATPVFVDIDPDT 91 (352)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHH----HHcCCeEEEEecCCCc
Confidence 46889999999999999999999999999999999988 689999999999998865433 345777777642
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc--hhccCCcEEEeccc--
Q 012321 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--ALSLGADLVLHSAT-- 356 (466)
Q Consensus 283 --~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~--pl~~gaDivv~S~s-- 356 (466)
.|++++++.+++ ++++|+++ |++|.+.|+++|.++|+++|+++|+|++++.+.... +.....|+.+.|++
T Consensus 92 ~~~d~~~l~~~i~~-~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~ 167 (352)
T cd00616 92 YNIDPELIEAAITP-RTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPT 167 (352)
T ss_pred CCcCHHHHHHhcCc-CCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCCC
Confidence 368999999976 49999985 568999999999999999999999999987654322 22223588999976
Q ss_pred cccccccCceEEEEEeC-hHHHHHHHHHHHH---------------hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 012321 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHV---------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 357 K~lgG~gdv~gG~vvg~-~eli~~l~~~~~~---------------~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~L 420 (466)
|+++++ .||+++.+ ++++++++.+... +...+++..+.+.+..++.++.+.++..++++++
T Consensus 168 K~~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~ 244 (352)
T cd00616 168 KNLTTG---EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERY 244 (352)
T ss_pred CCCccc---CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999644 36777765 5787777654321 1123566777777778888888889999999999
Q ss_pred HHHHHcCCCcE
Q 012321 421 AKILEAHPKVK 431 (466)
Q Consensus 421 a~~L~~~p~V~ 431 (466)
.+.|++.|+++
T Consensus 245 ~~~L~~~~g~~ 255 (352)
T cd00616 245 KELLADLPGIR 255 (352)
T ss_pred HHHhcCCCCcc
Confidence 99999988764
No 129
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.85 E-value=3.5e-20 Score=189.72 Aligned_cols=213 Identities=14% Similarity=0.214 Sum_probs=155.1
Q ss_pred CCCCchhHHHHHHHHHhhhCC-CcEEEe-CCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 205 GRYGNPTTVVVEEKMSALEGA-ESTVIM-ASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~-e~~v~~-~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
.+|+++...+|++.+++++|. ++.+++ ++|+ +++..++.+++++||+|++++|.|..... .++..|+++..++
T Consensus 64 ~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~----~~~~~g~~~~~~~ 139 (361)
T PRK00950 64 HRYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEI----SAKAHGAKPVYAK 139 (361)
T ss_pred cCCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHH----HHHHcCCEEEEee
Confidence 345556679999999999986 334444 7887 77888888888999999999999876432 3445677776664
Q ss_pred -----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc--chh--ccCCcEEE
Q 012321 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KAL--SLGADLVL 352 (466)
Q Consensus 282 -----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~--~pl--~~gaDivv 352 (466)
..|++++++.+++ ++++|++++|+||||.+.+.++|.++|+++|+++|+|++|...... .++ .....+++
T Consensus 140 ~~~~~~~~~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~ 218 (361)
T PRK00950 140 REEDFSLDVDSVLNAITE-KTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIG 218 (361)
T ss_pred cCCCCCcCHHHHHHHhcc-CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEE
Confidence 3478999998876 4899999999999999999999999999999999999998643311 111 12234888
Q ss_pred eccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHH
Q 012321 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L~ 425 (466)
.|+||.++.+| .+.||+++++++++.+++....++ .+....+.+...+ +.++...++..++++.+.+.|.
T Consensus 219 ~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~ 291 (361)
T PRK00950 219 RTFSKVFGLAG-LRIGYGFVPEWLIDYYMRAKTPFS--LTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP 291 (361)
T ss_pred EeehHhhcCch-hhcchhcCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999777 467999999999988887665443 3344333333333 3344444455556666666664
No 130
>PRK07777 aminotransferase; Validated
Probab=99.85 E-value=4.1e-19 Score=184.11 Aligned_cols=210 Identities=16% Similarity=0.190 Sum_probs=148.0
Q ss_pred HHHHHHHHHhh----hCC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-
Q 012321 212 TVVVEEKMSAL----EGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (466)
Q Consensus 212 ~~~Lee~lA~l----~g~----e-~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd- 281 (466)
...|++.++++ +|. + +.+++++|++|+.+++.+++.+||+|++..|.|+.....+ ...|.++..++
T Consensus 63 ~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~----~~~g~~~~~~~~ 138 (387)
T PRK07777 63 IPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVI----AMAGAHRVPVPL 138 (387)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHCCCEEEEeec
Confidence 45566666554 553 2 3555555569999999999999999999999998755333 33455544432
Q ss_pred --C-----CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chh---
Q 012321 282 --P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL--- 344 (466)
Q Consensus 282 --~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl--- 344 (466)
. .|++++++.++++ +++|++++|+||||.+++ +++|.++|+++++++|+|++|...... .++
T Consensus 139 ~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 217 (387)
T PRK07777 139 VPDGRGFALDLDALRAAVTPR-TRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATL 217 (387)
T ss_pred CCccCCCcCCHHHHHHhcCcc-cEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhC
Confidence 1 5789999988764 999999999999999975 788999999999999999998643211 111
Q ss_pred --ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHH---HHHHHHH-hhHHHHHHHHHHHHHHH
Q 012321 345 --SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN---AAYLIIR-GMKTLHLRVQQQNSTAL 418 (466)
Q Consensus 345 --~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~---~A~l~lr-gL~tl~~R~e~~~~na~ 418 (466)
..+.++++.|+||.|+.+| .+.|++++++++++.++..........+.. .+..++. +.+.+....+...++++
T Consensus 218 ~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 296 (387)
T PRK07777 218 PGMRERTVTISSAAKTFNVTG-WKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRD 296 (387)
T ss_pred CCCcCcEEEEeechhhccCcC-ceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 1246799999999998776 467899999999988887665333222221 1222222 23344445566778888
Q ss_pred HHHHHHHcC
Q 012321 419 RMAKILEAH 427 (466)
Q Consensus 419 ~La~~L~~~ 427 (466)
.+.+.|+++
T Consensus 297 ~l~~~L~~~ 305 (387)
T PRK07777 297 RLAAGLAEA 305 (387)
T ss_pred HHHHHHHhC
Confidence 898999875
No 131
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.85 E-value=1.1e-18 Score=181.48 Aligned_cols=211 Identities=14% Similarity=0.156 Sum_probs=149.5
Q ss_pred HHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~----e-~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...|++.+++++ |. + +.++++++++|+.+++.+++.+||+|++++|+|++.... ++..|+++..++.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~~~~ 144 (391)
T PRK07309 69 LLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPI----VNLVGAEIVEIDT 144 (391)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHH----HHHcCCEEEEEec
Confidence 456666666654 32 2 344455556999999999999999999999999986543 3345777666642
Q ss_pred ------CCHHHHHHhccC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ch-hcc
Q 012321 283 ------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-LSL 346 (466)
Q Consensus 283 ------~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~p-l~~ 346 (466)
.|++++++++++ .++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .+ ...
T Consensus 145 ~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~ 224 (391)
T PRK07309 145 TENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY 224 (391)
T ss_pred CCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh
Confidence 478999988864 24899999999999999886 788899999999999999998754321 11 111
Q ss_pred --CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH----HHHHHHHHHHHHHHH
Q 012321 347 --GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 420 (466)
Q Consensus 347 --gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t----l~~R~e~~~~na~~L 420 (466)
...+++.|+||.++.+| .+.||++++++++++++..........+......+...++. .....+++.++++.+
T Consensus 225 ~~~~~i~~~S~SK~~g~~G-lRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 303 (391)
T PRK07309 225 LPDQTILINGLSKSHAMTG-WRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYI 303 (391)
T ss_pred ccCCEEEEecChhhccCcc-ceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHH
Confidence 23489999999998776 56899999999999988765433333344433333333332 222334556677788
Q ss_pred HHHHHcC
Q 012321 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 304 ~~~l~~~ 310 (391)
T PRK07309 304 IEKMTDL 310 (391)
T ss_pred HHHHHHC
Confidence 8888875
No 132
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.85 E-value=2.3e-19 Score=186.92 Aligned_cols=215 Identities=15% Similarity=0.125 Sum_probs=149.5
Q ss_pred chhHHHHHHHHHhhhC-----C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 209 NPTTVVVEEKMSALEG-----A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g-----~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
.+....|++.++++++ . ++.++++++++++.+++.+++++||+|++++|+|.... ..++..|+++..++
T Consensus 72 ~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~----~~~~~~g~~v~~~~ 147 (401)
T TIGR01264 72 TVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE----TLAESMGIEVKLYN 147 (401)
T ss_pred CCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH----HHHHHcCCEEEEee
Confidence 3445678888888775 1 34455555559999999999999999999999998754 33455677766653
Q ss_pred -------CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chh-cc
Q 012321 282 -------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SL 346 (466)
Q Consensus 282 -------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl-~~ 346 (466)
..|++.+++.++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .++ .+
T Consensus 148 ~~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 226 (401)
T TIGR01264 148 LLPDKSWEIDLKQLESLIDEK-TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASL 226 (401)
T ss_pred cCCccCCCCCHHHHHHHhccC-ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHc
Confidence 24789999988764 899999999999999985 778899999999999999998753321 111 11
Q ss_pred ---CCcEEEeccccccccccCceEEEEEeCh------HHHHHHHHHHHHhCCCchHHHHHHHHHh-----hHHHHHHHHH
Q 012321 347 ---GADLVLHSATKFIGGHNDVLAGSISGSG------KLVTQIRNLHHVLGGALNPNAAYLIIRG-----MKTLHLRVQQ 412 (466)
Q Consensus 347 ---gaDivv~S~sK~lgG~gdv~gG~vvg~~------eli~~l~~~~~~~G~~ls~~~A~l~lrg-----L~tl~~R~e~ 412 (466)
..-|++.|+||.++.+| .+.||+++++ ++++.++..... ....+......+... -+.+....++
T Consensus 227 ~~~~~vi~~~SfSK~~~~~G-lRiG~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~ 304 (401)
T TIGR01264 227 SSTVPILSCGGLAKRWLVPG-WRLGWIIIHDRRGILRDIRDGLVKLSQR-ILGPCTIVQGALPSILLRTPQEYFDGTLSV 304 (401)
T ss_pred CCCCcEEEEccCcccCCCcc-ceEEEEEecCcchhHHHHHHHHHHHhhc-cCCCCcHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 11378999999998887 4678888763 344444444321 112222222222222 2345555667
Q ss_pred HHHHHHHHHHHHHcCCCc
Q 012321 413 QNSTALRMAKILEAHPKV 430 (466)
Q Consensus 413 ~~~na~~La~~L~~~p~V 430 (466)
..++++.+.+.|+++|++
T Consensus 305 ~~~~r~~l~~~L~~~~~~ 322 (401)
T TIGR01264 305 LESNAMLCYGALAAVPGL 322 (401)
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 778888899999988654
No 133
>PRK03321 putative aminotransferase; Provisional
Probab=99.84 E-value=3.6e-20 Score=189.36 Aligned_cols=215 Identities=18% Similarity=0.247 Sum_probs=159.1
Q ss_pred CCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
.+|+.+....|++.++++++. ++.+++++|+ +++..++..++++||+|+++.|.|..... .++..|+++..++.
T Consensus 52 ~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~----~~~~~g~~~~~v~~ 127 (352)
T PRK03321 52 NRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPI----LVQVAGATPVQVPL 127 (352)
T ss_pred CcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHH----HHHHcCCEEEEccC
Confidence 334556789999999999986 3467777887 77788888889999999999999876432 23446777766653
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcc----chh---c-cC
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL---S-LG 347 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~--~gillIvD~t~a~~~~~----~pl---~-~g 347 (466)
.|++++++++++ ++++|++++|+||||.+.+.++|.++|++ +++++|+|++|...... .++ . ..
T Consensus 128 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 206 (352)
T PRK03321 128 TPDHTHDLDAMAAAITD-RTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHP 206 (352)
T ss_pred CCCCCCCHHHHHHhhcc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCC
Confidence 378999999977 49999999999999999999999999987 59999999998643321 111 1 12
Q ss_pred CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~---lrgL~tl~~R~e~~~~na~~La~~L 424 (466)
.-+++.|+||.++.+| ++.|++++++++++.+++... ....+....+.+ +...+.+..++++..++...+.+.|
T Consensus 207 ~vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~~~--~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L 283 (352)
T PRK03321 207 NVVVLRTFSKAYGLAG-LRVGYAVGHPEVIAALRKVAV--PFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAAL 283 (352)
T ss_pred CEEEEecchHHhhhHH-HhhhhhcCCHHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3488899999998766 568999999999999887543 233344443333 3333455556666667777788888
Q ss_pred HcC
Q 012321 425 EAH 427 (466)
Q Consensus 425 ~~~ 427 (466)
++.
T Consensus 284 ~~~ 286 (352)
T PRK03321 284 RAA 286 (352)
T ss_pred HHC
Confidence 875
No 134
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=7.9e-20 Score=188.69 Aligned_cols=215 Identities=16% Similarity=0.261 Sum_probs=155.0
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC---
Q 012321 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd--- 281 (466)
|+.+....|+++|+++++. ++.|++++|. +++..++..++++||.|++++|+|+.....+ ...|.++..++
T Consensus 64 Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~~~~~vp~~~ 139 (369)
T PRK08153 64 YGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHV----AGFGGRLVTVPYRD 139 (369)
T ss_pred CCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHH----HHcCCeEEEeeCCC
Confidence 4445578999999999986 4567777777 8888888888999999999999998755333 23455555443
Q ss_pred -CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcc---chhc--cCCcEEEe
Q 012321 282 -PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ---KALS--LGADLVLH 353 (466)
Q Consensus 282 -~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~--~gillIvD~t~a~~~~~---~pl~--~gaDivv~ 353 (466)
..|++++++.+...++++|++++|+||||.+.+.+++.++++. ++++||+||+|...... .++. ....+++.
T Consensus 140 ~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~ 219 (369)
T PRK08153 140 DREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMR 219 (369)
T ss_pred CCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEe
Confidence 3468888777654458999999999999999998877777654 38999999998653321 1111 12348899
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L~~~p 428 (466)
|+||.++.+| ++.||+++++++++.+.+....++ .++..++.+...+ +.+....+...++++.+.+.|++++
T Consensus 220 SfSK~~g~~G-lRiG~~v~~~~~~~~l~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g 294 (369)
T PRK08153 220 TFSKAYGLAG-ARVGYAIGAPGTIKAFDKVRNHFG--MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANG 294 (369)
T ss_pred cchHhccCcc-hheeeeecCHHHHHHHHHhhcCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999999777 467999999999998887665443 4455444443333 3344445556677778888887653
No 135
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=6.1e-20 Score=189.02 Aligned_cols=218 Identities=17% Similarity=0.160 Sum_probs=159.3
Q ss_pred cCCCCchhHHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc
Q 012321 204 YGRYGNPTTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~----g~---e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi 275 (466)
+.+|+++....|++.+++++ |. .+.|++++|+ +++..++.+++++||.|+++.|+|...... ....|+
T Consensus 59 ~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~----~~~~g~ 134 (368)
T PRK03317 59 LNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPII----ARGTHT 134 (368)
T ss_pred hccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHH----HHhcCC
Confidence 34455556678888888887 32 4567777776 899999999999999999999999875533 334566
Q ss_pred EEEEeC-----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---chh---
Q 012321 276 TATVID-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KAL--- 344 (466)
Q Consensus 276 ~v~~vd-----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~---~pl--- 344 (466)
++..++ ..|+++++++++++++++|++++|+||||.+.+.+++.++++..++++|+||+|...... ...
T Consensus 135 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~ 214 (368)
T PRK03317 135 EWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLL 214 (368)
T ss_pred eeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHH
Confidence 655443 347899999987545899999999999999999999999999999999999998743211 111
Q ss_pred c-cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh---hHHHHHHHHHHHHHHHHH
Q 012321 345 S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 345 ~-~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg---L~tl~~R~e~~~~na~~L 420 (466)
. ....+++.|+||.++.+| ++.|++++++++++.++..+..+ ..++..+..+... .+.+..++++..++.+.+
T Consensus 215 ~~~~~~i~~~SfSK~~g~~G-lRiG~~~~~~~~~~~l~~~~~~~--~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 291 (368)
T PRK03317 215 PEYPRLVVSRTMSKAFAFAG-GRLGYLAAAPAVVDALRLVRLPY--HLSAVTQAAARAALRHADELLASVAALRAERDRV 291 (368)
T ss_pred HhCCCEEEEEechhhhccch-hhhhhhhCCHHHHHHHHhcCCCC--CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 1 122478899999999776 46799999999999888655333 3444444433333 344445556667778888
Q ss_pred HHHHHcCC
Q 012321 421 AKILEAHP 428 (466)
Q Consensus 421 a~~L~~~p 428 (466)
.+.|+++.
T Consensus 292 ~~~L~~~g 299 (368)
T PRK03317 292 VAWLRELG 299 (368)
T ss_pred HHHHHHCC
Confidence 88898763
No 136
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.4e-19 Score=184.71 Aligned_cols=213 Identities=17% Similarity=0.214 Sum_probs=154.8
Q ss_pred ccCCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 203 EYGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 203 ~Y~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
.+.+|+.+....|+++++++++. ++.|++++|+ +++..++..+ +||+|+++.|.|+... ...+..|+++..+
T Consensus 48 ~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~----~~~~~~g~~~~~v 121 (337)
T PRK03967 48 PFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGKHIVITPPTFGMYS----FYAKLNGIPVIDV 121 (337)
T ss_pred ccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCCeEEEeCCChHHHH----HHHHHcCCeEEEe
Confidence 35666666788999999999985 4566677776 8887776655 7999999999998533 2334567777666
Q ss_pred C-----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccch---hc-cCCcEE
Q 012321 281 D-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---LS-LGADLV 351 (466)
Q Consensus 281 d-----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~p---l~-~gaDiv 351 (466)
+ ..|++.+++.+. ++++|++++|+||||.+.+.++|.++++ +++++|+|++|........ .. ...-++
T Consensus 122 ~~~~~~~~d~~~l~~~~~--~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~ 198 (337)
T PRK03967 122 PLKEDFTIDGERIAEKAK--NASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLIL 198 (337)
T ss_pred ecCCCCCcCHHHHHHhcc--CCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEE
Confidence 4 246788887653 3889999999999999999999999995 7999999999875322111 11 123488
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII---RGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~l---rgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
+.|+||.++.+| ++.||+++++++++++++....++ .+......+. ...+.+..++++..+++..+.+.|.++
T Consensus 199 l~S~SK~~~l~G-lRiG~iv~~~~~i~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 274 (337)
T PRK03967 199 LRTFSKAFGLAG-IRAGYAIANEEIIDALYRIKPPFS--LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY 274 (337)
T ss_pred EecchHhhcchh-hhheeeecCHHHHHHHHhhcCCCC--CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999777 568999999999998887664433 3344333333 333445555666677788888888764
No 137
>PRK08912 hypothetical protein; Provisional
Probab=99.84 E-value=4.9e-19 Score=183.54 Aligned_cols=210 Identities=18% Similarity=0.216 Sum_probs=149.6
Q ss_pred HHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-
Q 012321 212 TVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~----e-~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd- 281 (466)
..+|++.+++++ |. + +.++++++++++.+++.+++++||+|++++|+|+.... .++..|+++..++
T Consensus 65 ~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~~ 140 (387)
T PRK08912 65 LPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP----LIRRAGGVPRLVRL 140 (387)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH----HHHHcCCEEEEEec
Confidence 346666666553 42 3 34444455699999999999999999999999987553 3455677766553
Q ss_pred -----CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chh-c---
Q 012321 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-S--- 345 (466)
Q Consensus 282 -----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl-~--- 345 (466)
..|++++++.+.++ +++|++++|+||||.+.+ +++|.++|+++++++|+|++|...... .++ .
T Consensus 141 ~~~~~~~~~~~l~~~~~~~-~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 219 (387)
T PRK08912 141 EPPHWRLPRAALAAAFSPR-TKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPG 219 (387)
T ss_pred CcccCcCCHHHHHHHhCcc-ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCC
Confidence 23689999988764 899999999999999987 667899999999999999998543211 111 1
Q ss_pred -cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh----hHHHHHHHHHHHHHHHHH
Q 012321 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG----MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 346 -~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg----L~tl~~R~e~~~~na~~L 420 (466)
.+.++++.|+||.++.+| .+.|++++++++++.+.......+...++.....+... .+.+....++..++++.+
T Consensus 220 ~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l 298 (387)
T PRK08912 220 MRERTVKIGSAGKIFSLTG-WKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRL 298 (387)
T ss_pred ccCceEEEeechhhccCcC-ceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 235799999999998777 46799999999999888766554333333222222222 233444456677788888
Q ss_pred HHHHHcC
Q 012321 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 299 ~~~L~~~ 305 (387)
T PRK08912 299 AAGLRRI 305 (387)
T ss_pred HHHHHhC
Confidence 8999876
No 138
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.84 E-value=3.9e-19 Score=185.55 Aligned_cols=215 Identities=15% Similarity=0.136 Sum_probs=151.5
Q ss_pred hhHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 210 PTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~--------e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
.....+++.++++++. ++.+++++|++|+..++.+++.+||+|+++.|.|..... .+...|+++..++
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~ 148 (403)
T TIGR01265 73 VGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDT----RAAFSGLEVRLYD 148 (403)
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH----HHHHcCCEEEEec
Confidence 4456778888887762 345566666799999999999999999999999986443 3345677766653
Q ss_pred C-------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----h-hcc
Q 012321 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-LSL 346 (466)
Q Consensus 282 ~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~----p-l~~ 346 (466)
. .|+++++++++++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... + ..+
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~~-~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 227 (403)
T TIGR01265 149 LLPEKDWEIDLDGLEALADEK-TVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASF 227 (403)
T ss_pred CCcccCCccCHHHHHHHhCcC-ccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhh
Confidence 2 4789999988764 899999999999999986 7889999999999999999987543211 1 111
Q ss_pred C---CcEEEeccccccccccCceEEEEEeC-h-H-----HHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHH
Q 012321 347 G---ADLVLHSATKFIGGHNDVLAGSISGS-G-K-----LVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQ 411 (466)
Q Consensus 347 g---aDivv~S~sK~lgG~gdv~gG~vvg~-~-e-----li~~l~~~~~~~G~~ls~~~A~l~lrgL-----~tl~~R~e 411 (466)
. .-|++.|+||.++.+| .+.||+++. + + +++.+...... ....+.+.+..+...+ +.+....+
T Consensus 228 ~~~~~vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 305 (403)
T TIGR01265 228 ASIVPVLSLGGISKRWVVPG-WRLGWIIIHDPHGIFRDTVLQGLKNLLQR-ILGPATIVQGALPDILENTPQEFFDGKIS 305 (403)
T ss_pred ccCCcEEEEeecccccCCCc-ceEEEEEEeCchhhhHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHhChHHHHHHHHH
Confidence 1 2378899999998887 457888763 2 3 33444443321 1223344333332222 34555667
Q ss_pred HHHHHHHHHHHHHHcCCCcE
Q 012321 412 QQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~ 431 (466)
+..+++..+.+.|+.+|++.
T Consensus 306 ~~~~~~~~l~~~L~~~~~~~ 325 (403)
T TIGR01265 306 VLKSNAELCYEELKDIPGLV 325 (403)
T ss_pred HHHHHHHHHHHHHhcCCCce
Confidence 77888899999999887664
No 139
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.84 E-value=6.4e-20 Score=188.39 Aligned_cols=216 Identities=13% Similarity=0.207 Sum_probs=158.1
Q ss_pred cCCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
+.+|+++....|++.++++++. .+.|++++|+ +++..++.+++++||+|++++|.|..... .....|+++..++
T Consensus 61 ~~~y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~~~ 136 (367)
T PRK02731 61 LHRYPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPI----AAQAVGAKPVEVP 136 (367)
T ss_pred hcCCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHH----HHHHcCCeEEEec
Confidence 3455555667999999999987 3567777776 77888888889999999999999965432 2344677777665
Q ss_pred ----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCcc-------chhcc-C
Q 012321 282 ----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-------KALSL-G 347 (466)
Q Consensus 282 ----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~--gillIvD~t~a~~~~~-------~pl~~-g 347 (466)
..|++++++.+++ ++++|++++|+||||.+++.++|.++++.. |+++|+|++|...... ..... .
T Consensus 137 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 215 (367)
T PRK02731 137 AKDYGHDLDAMLAAVTP-RTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFP 215 (367)
T ss_pred ccCCCCCHHHHHHHhCC-CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcC
Confidence 3478999999976 489999999999999999999999998874 8999999997643321 11111 2
Q ss_pred CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L 424 (466)
..+++.|+||.++.+| .+.||++++++++++++.....++ .+....+.+...+ +.++...+...++.+.+.+.|
T Consensus 216 ~~i~~~S~SK~~g~~G-~RiG~l~~~~~~~~~l~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L 292 (367)
T PRK02731 216 NVVVTRTFSKAYGLAG-LRVGYGIAPPEIIDALNRVRQPFN--VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFL 292 (367)
T ss_pred CEEEEeeehHhhcCcc-cceeeeeCCHHHHHHHHHccCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3488899999998666 467999999999998887654333 2344444443333 334444455566777788888
Q ss_pred HcC
Q 012321 425 EAH 427 (466)
Q Consensus 425 ~~~ 427 (466)
+++
T Consensus 293 ~~~ 295 (367)
T PRK02731 293 AEL 295 (367)
T ss_pred HHC
Confidence 876
No 140
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.84 E-value=8e-19 Score=182.11 Aligned_cols=210 Identities=15% Similarity=0.114 Sum_probs=165.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
.+.++++|+.++++.|.+.+++++||++|+.+++.++ +++||+||++.++|..+...+ ...|+++.++|.
T Consensus 30 g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~----~~~G~~~v~vd~d~~~~ 105 (376)
T TIGR02379 30 GPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTM 105 (376)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcC
Confidence 5789999999999999999999999999999998887 899999999999999876443 345788877763
Q ss_pred -CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc--cchhccCCcEEEeccc--c
Q 012321 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKALSLGADLVLHSAT--K 357 (466)
Q Consensus 283 -~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~--~~pl~~gaDivv~S~s--K 357 (466)
.|+++++++++++ |++|+ |+||+|...|+++|.++|+++|+++|+|++++.+.. .++...-.|+.++|++ |
T Consensus 106 ~~d~~~le~~i~~~-tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K 181 (376)
T TIGR02379 106 NIDETLIESAITHR-TKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETK 181 (376)
T ss_pred CCCHHHHHHhcCcC-ceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCC
Confidence 3788999999874 99986 688899999999999999999999999999876532 2233222478888875 5
Q ss_pred ccccccCceEEEEEeC-hHHHHHHHHHHHH-------------------hC--CCchHHHHHHHHHhhHHHHHHHHHHHH
Q 012321 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV-------------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNS 415 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~-~eli~~l~~~~~~-------------------~G--~~ls~~~A~l~lrgL~tl~~R~e~~~~ 415 (466)
.+...+ .||+++.+ +++.++++.++.. .| ..++.+.|.+++..|+.++..+++.++
T Consensus 182 ~l~~g~--~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~ 259 (376)
T TIGR02379 182 NYTSGG--EGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLA 259 (376)
T ss_pred cCcccC--CceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHH
Confidence 554332 36776654 7888888866541 11 124556677778889999999999999
Q ss_pred HHHHHHHHHHcCC
Q 012321 416 TALRMAKILEAHP 428 (466)
Q Consensus 416 na~~La~~L~~~p 428 (466)
+++...+.|.+.+
T Consensus 260 ~~~~y~~~L~~~~ 272 (376)
T TIGR02379 260 TWQLYQDALKPLE 272 (376)
T ss_pred HHHHHHHHhccCC
Confidence 9999999987765
No 141
>PRK07683 aminotransferase A; Validated
Probab=99.84 E-value=9.2e-19 Score=181.82 Aligned_cols=212 Identities=13% Similarity=0.175 Sum_probs=151.6
Q ss_pred hhHHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 210 PTTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~lA~l~----g~----e-~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
+....|++.+++++ |. + +.++++++++|+.+++.+++++||+|++++|+|......+ ...|+++.++
T Consensus 65 ~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~ 140 (387)
T PRK07683 65 AGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPII----RLCGAKPVFI 140 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHH----HHcCCEEEEe
Confidence 34566777777665 32 3 3444444569999999999999999999999999865443 3457777776
Q ss_pred CCC------CHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc---h-hcc-
Q 012321 281 DPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LSL- 346 (466)
Q Consensus 281 d~~------D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~---p-l~~- 346 (466)
+.. |.+++++.++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|....... + ..+
T Consensus 141 ~~~~~~~~~~~~~l~~~~~~~-~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 219 (387)
T PRK07683 141 DTRSTGFRLTAEALENAITEK-TRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFP 219 (387)
T ss_pred ecCcccCCCCHHHHHHhcCcC-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhcc
Confidence 532 568899988764 899999999999999976 7888999999999999999987543211 1 111
Q ss_pred ---CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHH
Q 012321 347 ---GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALR 419 (466)
Q Consensus 347 ---gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~~ 419 (466)
+..+++.|+||.++.+| ++.||+++++++++++...........+...+..+...+ ..+....+++.+++..
T Consensus 220 ~~~~~vi~~~s~SK~~~~pG-lRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (387)
T PRK07683 220 EMREKTIVINGLSKSHSMTG-WRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDY 298 (387)
T ss_pred CCcCCeEEEeeccccccCcc-ceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 24589999999999776 568999999999999887654333333333333332222 3344444556677888
Q ss_pred HHHHHHcC
Q 012321 420 MAKILEAH 427 (466)
Q Consensus 420 La~~L~~~ 427 (466)
+.+.|+++
T Consensus 299 ~~~~l~~~ 306 (387)
T PRK07683 299 VYNRLISM 306 (387)
T ss_pred HHHHHHHc
Confidence 88888764
No 142
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.2e-19 Score=185.17 Aligned_cols=214 Identities=16% Similarity=0.166 Sum_probs=155.2
Q ss_pred CCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
.+|+++....|++.++++++. ++.|++++|+ +++.+++.+++++||+|++++|.|+..... .+..|+++..++.
T Consensus 55 ~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 130 (353)
T PRK05387 55 RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVY----AGLYGIPYEEIPL 130 (353)
T ss_pred hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHH----HHHcCCEEEEeec
Confidence 345555668999999999986 3445555555 999999999999999999999999664432 3445777666542
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc-CCEEEEeCCCCCCCccch--h--ccCCcEEE
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKA--L--SLGADLVL 352 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~-gillIvD~t~a~~~~~~p--l--~~gaDivv 352 (466)
.|++++++ ++++|++++|+||||.+.+.+++.++++.+ ++++|+|++|........ + .....+++
T Consensus 131 ~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~ 205 (353)
T PRK05387 131 DDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVV 205 (353)
T ss_pred CCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEE
Confidence 36676652 257899999999999999999999999875 999999999864321111 1 12346999
Q ss_pred eccccccccccCceEEEEEeChHHHHHHHHHHHHhC-CCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G-~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L~~~p 428 (466)
.|+||.++.+| ++.|+++++++++++++......+ .+.+....+.+...+ +.++...++..++++.+.+.|++++
T Consensus 206 ~S~SK~~~~~G-lR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g 284 (353)
T PRK05387 206 QTFSKSRSLAG-LRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALG 284 (353)
T ss_pred EehhHhhcchh-hhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999998776 357999999999999887765432 234444444333333 3455556667788888999998863
No 143
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.84 E-value=1.7e-19 Score=184.31 Aligned_cols=216 Identities=18% Similarity=0.229 Sum_probs=158.3
Q ss_pred CCCCchh-HHHHHHHHHhhhC--------CCcEEEeCCHH-HHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccC
Q 012321 205 GRYGNPT-TVVVEEKMSALEG--------AESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 205 ~R~~~p~-~~~Lee~lA~l~g--------~e~~v~~~SG~-aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~ 273 (466)
..|+.+. ...|++.++++++ .+..+++++|+ +++..++..+ ..+||.|++++|+|+.....+ +..
T Consensus 38 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~----~~~ 113 (363)
T PF00155_consen 38 LGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAA----RLL 113 (363)
T ss_dssp TSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHH----HHT
T ss_pred ccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccccceecCCccccccccc----ccc
Confidence 3444444 7899999999887 34378888888 6666666666 679999999999999876544 345
Q ss_pred CcEEEEeC-------CCCHHHHHHhccCC-----CceEEEEeCCCCCCcccccHH---HHHHHHHhcCCEEEEeCCCCCC
Q 012321 274 GITATVID-------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 274 gi~v~~vd-------~~D~e~Le~ai~~~-----~tklV~lesPsNPtG~v~dl~---~I~ela~~~gillIvD~t~a~~ 338 (466)
|+++..++ ..|+++|++.+++. ++++|++++|+||||.+++.+ +|+++|+++|+++|+|++|...
T Consensus 114 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~ 193 (363)
T PF00155_consen 114 GAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDL 193 (363)
T ss_dssp TSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTG
T ss_pred Cceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceecc
Confidence 66666665 45899999988762 378999999999999998654 5555599999999999998765
Q ss_pred Cccch--------hccCC-cEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHH-----HHhh-
Q 012321 339 LNQKA--------LSLGA-DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI-----IRGM- 403 (466)
Q Consensus 339 ~~~~p--------l~~ga-Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~-----lrgL- 403 (466)
..... ...+. .+++.|+||.++.+|. +.|++++++++++.++........ +...+.++ ....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RvG~i~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~ 270 (363)
T PF00155_consen 194 IFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGL-RVGYIVAPPELIERLRRFQRSGLS--SSPMQAAAAAALSDPELV 270 (363)
T ss_dssp BSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGG-TEEEEEEEHHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHH
T ss_pred ccCCCccCcccccccccccceeeeecccccccccc-ccccccchhhhhhhhhhccccccc--cchhhHHHHHhhhccccc
Confidence 44321 12233 4999999999988874 578998899999999988776554 22222221 1121
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 404 -KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 404 -~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
+.+..+.++..++++.+.+.|+++
T Consensus 271 ~~~~~~~~~~l~~~~~~l~~~L~~~ 295 (363)
T PF00155_consen 271 EKWLEELRERLRENRDLLREALEEI 295 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccchhhHHHHHHHHHHHHHHh
Confidence 266777888889999999999887
No 144
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.84 E-value=1.5e-19 Score=184.65 Aligned_cols=249 Identities=16% Similarity=0.186 Sum_probs=182.6
Q ss_pred cccCCCccCChH-----HHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCC-C-cEEEeCCHHHHHHHHHHHh--c--
Q 012321 178 VNTSAYFFKKTA-----ELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGA-E-STVIMASGMSASTVMLLAL--V-- 246 (466)
Q Consensus 178 ~~sst~~~~~~~-----~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~-e-~~v~~~SG~aAi~~al~al--l-- 246 (466)
|.+||...+..- .+...|+++.+-|.|+|......+..|+.+|++.|+ + +.+++++|++++++++... .
T Consensus 7 ~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~ 86 (386)
T COG1104 7 NAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYR 86 (386)
T ss_pred ccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhh
Confidence 345555555442 123356788888999999999999999999999997 3 4445555569999888863 2
Q ss_pred --cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHH
Q 012321 247 --PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (466)
Q Consensus 247 --~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~-----D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ 319 (466)
+.|.|||++.-.|+.....+..+ +..|++|++++.+ |+++|+++|+++ |.+|.+...||.+|.++|+++|.
T Consensus 87 ~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vtyl~V~~~G~v~~e~L~~al~~~-T~LVSim~aNnE~G~IQpI~ei~ 164 (386)
T COG1104 87 NAQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRPD-TILVSIMHANNETGTIQPIAEIG 164 (386)
T ss_pred cccCCCeEEEcccccHHHHHHHHHH-HhcCCeEEEeCCCCCCeEcHHHHHHhcCCC-ceEEEEEecccCeeecccHHHHH
Confidence 25789999999999988877665 7779999998754 899999999986 99999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCCCCC-CccchhccCCcEEEeccccccccccCceEEEEEeChHH-HHHH-HHHHH---HhCCC--c
Q 012321 320 DLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQI-RNLHH---VLGGA--L 391 (466)
Q Consensus 320 ela~~~gillIvD~t~a~~-~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~el-i~~l-~~~~~---~~G~~--l 391 (466)
++|+++|+++++|.+++.+ +..+...+++|++..|.||+.|+.| .|+++.++.. +..+ ..-.+ .-.++ +
T Consensus 165 ~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkG---iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv 241 (386)
T COG1104 165 EICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKG---IGALYVRPGVRLEPLIHGGGQERGLRSGTENV 241 (386)
T ss_pred HHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCc---eEEEEECCCCccCceeccCcCCCCCCCCCccH
Confidence 9999999999999998875 4455666689999999999988876 4666655432 1111 10000 00111 1
Q ss_pred hHHH--HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcC-CCcE
Q 012321 392 NPNA--AYLIIRGMKTLHLRVQQQNSTALRMAKILEAH-PKVK 431 (466)
Q Consensus 392 s~~~--A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~-p~V~ 431 (466)
.... +..+....+.++...++....+++|.+.|.+. |.+.
T Consensus 242 ~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~ 284 (386)
T COG1104 242 PGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVY 284 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 1111 12223355667777778888888899988875 5543
No 145
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.84 E-value=7.3e-19 Score=180.66 Aligned_cols=216 Identities=21% Similarity=0.196 Sum_probs=163.0
Q ss_pred cCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~ 283 (466)
+.++..+..+.++++++++++.++.+++++|++++..++..++++||+|++.++.|+.+... +...|.++..++..
T Consensus 78 ~~~g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~----~~~~g~~~~~~~~~ 153 (385)
T PRK05958 78 LVTGNSPAHEALEEELAEWFGAERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDG----ARLSRARVRRYPHN 153 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHH----HHhcCCceEEeCCC
Confidence 33445678999999999999988899999999888888888899999999999999876543 33457777777777
Q ss_pred CHHHHHHhccCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---c------hhc-cCCcEE
Q 012321 284 DMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---K------ALS-LGADLV 351 (466)
Q Consensus 284 D~e~Le~ai~~~--~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~---~------pl~-~gaDiv 351 (466)
|++++++.+++. ++++|+++++.|++|.+.++++|.++|+++|+++|+|++|+.+... . .+. ...+++
T Consensus 154 d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~ 233 (385)
T PRK05958 154 DVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVIL 233 (385)
T ss_pred CHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEE
Confidence 899999988652 3678888899999999999999999999999999999998654321 0 111 223488
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHc
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~tl---~~R~e~~~~na~~La~~L~~ 426 (466)
+.|++|++++. ||++++++++++.++.... ..+...++..+..+...++.+ ..+.++..++++++.+.|++
T Consensus 234 ~~s~sK~~~~~----Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~ 309 (385)
T PRK05958 234 VGTLGKALGSS----GAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRA 309 (385)
T ss_pred EEechhhcccC----CcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999865 4888899888887754322 122334444444343444433 34567778888899999987
Q ss_pred C
Q 012321 427 H 427 (466)
Q Consensus 427 ~ 427 (466)
.
T Consensus 310 ~ 310 (385)
T PRK05958 310 L 310 (385)
T ss_pred c
Confidence 5
No 146
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1e-18 Score=182.29 Aligned_cols=215 Identities=15% Similarity=0.188 Sum_probs=154.4
Q ss_pred hhHHHHHHHHHhhhCC---CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC----
Q 012321 210 PTTVVVEEKMSALEGA---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID---- 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~---e~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd---- 281 (466)
+.++++.+.+++..|. ++.+++++| ++|+..++.+++++||+|++++|+|......+. ..+.....++
T Consensus 74 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~----~~~~~~~~v~~~~~ 149 (402)
T PRK06107 74 ALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVL----ANDGTPVIVACPEE 149 (402)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHH----HcCCEEEEecCCcc
Confidence 4566777777766664 344556665 599999999999999999999998887554332 1233332232
Q ss_pred ---CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhc-CCEEEEeCCCCCCCcc-----chhcc---
Q 012321 282 ---PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK-GAIVCIDGTFATPLNQ-----KALSL--- 346 (466)
Q Consensus 282 ---~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~-gillIvD~t~a~~~~~-----~pl~~--- 346 (466)
..|++++++.+++ ++++|++++|+||||.+++ +++|+++|+++ |+++|+|++|....+. .....
T Consensus 150 ~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~ 228 (402)
T PRK06107 150 QGFKLTPEALEAAITP-RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPE 228 (402)
T ss_pred cCCCCCHHHHHhhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcC
Confidence 1467899998876 4899999999999999986 56778889998 9999999998642211 11111
Q ss_pred --CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHH
Q 012321 347 --GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRM 420 (466)
Q Consensus 347 --gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~~L 420 (466)
+..+++.|+||.|+.+| .+.||++++++++++++......+...+....+++...+ +.+....++..++++.+
T Consensus 229 ~~~~vi~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 307 (402)
T PRK06107 229 LRDRVLVTNGVSKTYAMTG-WRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYA 307 (402)
T ss_pred ccCCEEEEeccchhhcCcc-cceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 23588999999998777 468999999999999988877655555555554444333 34555566778888889
Q ss_pred HHHHHcCCCc
Q 012321 421 AKILEAHPKV 430 (466)
Q Consensus 421 a~~L~~~p~V 430 (466)
.+.|++++.+
T Consensus 308 ~~~L~~~~g~ 317 (402)
T PRK06107 308 LALLNAIPGL 317 (402)
T ss_pred HHHHhcCCCC
Confidence 9999887543
No 147
>PRK08363 alanine aminotransferase; Validated
Probab=99.84 E-value=1.4e-18 Score=180.97 Aligned_cols=217 Identities=16% Similarity=0.155 Sum_probs=150.0
Q ss_pred chhHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 209 NPTTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~----g~----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
.+....|++.+++++ |. ++.++++++++|+.+++.+++++||+|++++|+|......+ ...|..+..+
T Consensus 69 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~v~~ 144 (398)
T PRK08363 69 SEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLV----KFYGGVPVEY 144 (398)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCEEEEe
Confidence 344667777777775 31 34444555569999999999999999999999999866443 3345444333
Q ss_pred -C------CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----hhcc
Q 012321 281 -D------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----ALSL 346 (466)
Q Consensus 281 -d------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~----pl~~ 346 (466)
+ ..|+++++++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....... ...+
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~ 223 (398)
T PRK08363 145 RTIEEEGWQPDIDDIRKKITEK-TKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSL 223 (398)
T ss_pred ccccccCCcCCHHHHHhhCCcc-eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHc
Confidence 1 14688999988764 899999999999999987 8889999999999999999986532211 1111
Q ss_pred ---CCcEEEeccccccccccCceEEEEEe--ChHHHHHHHHHHHHh---CCCchHHHHHH---HHHh-hHHHHHHHHHHH
Q 012321 347 ---GADLVLHSATKFIGGHNDVLAGSISG--SGKLVTQIRNLHHVL---GGALNPNAAYL---IIRG-MKTLHLRVQQQN 414 (466)
Q Consensus 347 ---gaDivv~S~sK~lgG~gdv~gG~vvg--~~eli~~l~~~~~~~---G~~ls~~~A~l---~lrg-L~tl~~R~e~~~ 414 (466)
..-+++.|+||.++.+| .+.||+++ ++++++.++...... ....+...... ++.. .+.+....++..
T Consensus 224 ~~~~~vi~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~ 302 (398)
T PRK08363 224 TKDVPVIVMNGLSKVYFATG-WRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLK 302 (398)
T ss_pred CcCCcEEEEecchhccCCcc-ceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 12477899999998887 45788886 677777766543321 11223333222 2322 344555566777
Q ss_pred HHHHHHHHHHHcCCCcE
Q 012321 415 STALRMAKILEAHPKVK 431 (466)
Q Consensus 415 ~na~~La~~L~~~p~V~ 431 (466)
++...+.+.|+++|.+.
T Consensus 303 ~~~~~l~~~L~~~~~~~ 319 (398)
T PRK08363 303 ERRDYIYKRLNEIPGIS 319 (398)
T ss_pred HHHHHHHHHHhcCCCCE
Confidence 88888999998886643
No 148
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.84 E-value=7.3e-19 Score=184.09 Aligned_cols=211 Identities=12% Similarity=0.096 Sum_probs=143.8
Q ss_pred HHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 212 TVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~---e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
...|++.+++++ |. ++.|++++|+ +++.+++.+++.+||+|++++|+|+..... +...|+++..++.
T Consensus 76 ~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~----~~~~g~~~~~~~~~ 151 (409)
T PLN00143 76 ILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETY----AIFHHLEIRHFDLL 151 (409)
T ss_pred CHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHH----HHHcCCEEEEEecc
Confidence 445666666665 32 3445555555 999999999999999999999999886533 3345666655532
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chhc-c--
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS-L-- 346 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl~-~-- 346 (466)
.|+++|+++++++ ++++++++|+||||.+++ +++|+++|+++++++|+|++|...... .++. .
T Consensus 152 ~~~~~~~d~~~l~~~~~~~-~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~ 230 (409)
T PLN00143 152 PEKGWEVDLDAVEAIADEN-TIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFAS 230 (409)
T ss_pred CCCCCcCCHHHHHHhcccC-CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcc
Confidence 3789999988764 899999999999999997 677888899999999999998754321 1111 1
Q ss_pred -CCcEEEeccccccccccCceEEEEEe-Ch-HHH------HHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHHH
Q 012321 347 -GADLVLHSATKFIGGHNDVLAGSISG-SG-KLV------TQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQ 412 (466)
Q Consensus 347 -gaDivv~S~sK~lgG~gdv~gG~vvg-~~-eli------~~l~~~~~~~G~~ls~~~A~l~lrgL-----~tl~~R~e~ 412 (466)
..-|++.|+||.++.+|. +.||+++ ++ .++ +.++..... ....+......+...+ ..++..+++
T Consensus 231 ~~~vi~~~SfSK~f~~pGl-RvG~~v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~ 308 (409)
T PLN00143 231 IVPVITLGSISKRWMIPGW-GLGWLVTCDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEKTTEDFFSKTINI 308 (409)
T ss_pred cCcEEEEccchhhcCCCcc-ceEEEEeeCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcChHHHHHHHHHH
Confidence 123899999999999884 5788887 33 343 333333221 1111223323222222 356666777
Q ss_pred HHHHHHHHHHHHHcCCC
Q 012321 413 QNSTALRMAKILEAHPK 429 (466)
Q Consensus 413 ~~~na~~La~~L~~~p~ 429 (466)
..++.+.+.+.|++++.
T Consensus 309 ~~~~~~~~~~~L~~~~~ 325 (409)
T PLN00143 309 LRAALAFCYDKLKEIPC 325 (409)
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 77888888888887653
No 149
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.84 E-value=1.7e-19 Score=180.75 Aligned_cols=217 Identities=16% Similarity=0.172 Sum_probs=150.7
Q ss_pred CccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
.+--.++....+++|+.+|+++|+++++++++|+ +++..++.+++++||+|++++++|.+....+. ..|+++.++
T Consensus 51 ~d~l~~~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~----~~g~~~~~v 126 (294)
T cd00615 51 LDDLLDPTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLV----LSGAVPVYL 126 (294)
T ss_pred CCCCCCCChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHH----HCCCEEEEe
Confidence 3333345667899999999999998888766665 89999999999999999999999988765442 346666555
Q ss_pred C-----------CCCHHHHHHhccC-CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC------ccc
Q 012321 281 D-----------PADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------NQK 342 (466)
Q Consensus 281 d-----------~~D~e~Le~ai~~-~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~------~~~ 342 (466)
+ ..|++++++++++ .++++|++++| |++|.+.|+++|.++||++|+++++|++++..+ ...
T Consensus 127 ~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~ 205 (294)
T cd00615 127 KPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSS 205 (294)
T ss_pred cCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcc
Confidence 3 2478999999864 24899999999 699999999999999999999999999987532 123
Q ss_pred hhccCCcEEEeccccccccccCceEEEEEeChHH--HHHHHHHHHHhCCCchHHHH-HHHHHhhHH----HHHHHHHHHH
Q 012321 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL--VTQIRNLHHVLGGALNPNAA-YLIIRGMKT----LHLRVQQQNS 415 (466)
Q Consensus 343 pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~el--i~~l~~~~~~~G~~ls~~~A-~l~lrgL~t----l~~R~e~~~~ 415 (466)
....|+|+++.|+||+++|+. .+|++..+.+. .+++......+..+...... ..+...++. -..++++..+
T Consensus 206 ~~~~~~div~~S~hK~l~g~~--~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~ 283 (294)
T cd00615 206 AAMAGADIVVQSTHKTLPALT--QGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIE 283 (294)
T ss_pred hhhcCCcEEEEchhcccchHh--HHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 345689999999999998764 35666554432 23444433333322221111 111111111 2334566666
Q ss_pred HHHHHHHHHH
Q 012321 416 TALRMAKILE 425 (466)
Q Consensus 416 na~~La~~L~ 425 (466)
+++.+.++|+
T Consensus 284 ~~~~~r~~l~ 293 (294)
T cd00615 284 LALYARQEIN 293 (294)
T ss_pred HHHHHHHHHh
Confidence 6666666654
No 150
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.84 E-value=2.2e-19 Score=184.29 Aligned_cols=215 Identities=17% Similarity=0.175 Sum_probs=150.2
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC
Q 012321 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~ 283 (466)
+|+.+....|++.++++++. ++.+++++|+ +++..++.++ .+|| +++..|.|..... .++..|+++..++..
T Consensus 51 ~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~~----~~~~~g~~~~~v~~~ 124 (356)
T PRK08056 51 RYPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYRR----ALQQVGCEIRRYSLR 124 (356)
T ss_pred cCcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHHH----HHHHcCCeEEEEecc
Confidence 34555578999999999986 3456666665 8888888775 6776 6777888876443 345567777666421
Q ss_pred -----CH-HHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc-----hh-ccCC
Q 012321 284 -----DM-EGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----AL-SLGA 348 (466)
Q Consensus 284 -----D~-e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~-----pl-~~ga 348 (466)
++ +++++.+++ ++++|++++|+||||.+.+ +++|+++|+++++++|+|++|....... .+ ....
T Consensus 125 ~~~~~~~~~~~~~~~~~-~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 203 (356)
T PRK08056 125 EADGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPH 203 (356)
T ss_pred cccCCCccHHHHHhccC-CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCC
Confidence 22 355566665 4999999999999999998 7789999999999999999986543221 11 2245
Q ss_pred cEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L 424 (466)
++++.|+||+++.+|. +.||+++ ++++++.+++.... ...+.+.++.+...+ ..+....++..++++.+.+.|
T Consensus 204 ~i~~~S~SK~~~~~G~-RiG~~v~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L 280 (356)
T PRK08056 204 LWVLRSLTKFYAIPGL-RLGYLVNSDDAAVARMRRQQMP--WSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQAL 280 (356)
T ss_pred EEEEEechhhccCcch-hheeeecCCHHHHHHHHHhCCC--CchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999998874 5788887 56777777654322 233444444333222 334444566778888899999
Q ss_pred HcCCCc
Q 012321 425 EAHPKV 430 (466)
Q Consensus 425 ~~~p~V 430 (466)
++++.+
T Consensus 281 ~~~~~~ 286 (356)
T PRK08056 281 CALPLL 286 (356)
T ss_pred hcCCCc
Confidence 888765
No 151
>PRK09148 aminotransferase; Validated
Probab=99.84 E-value=6.6e-19 Score=184.13 Aligned_cols=210 Identities=14% Similarity=0.125 Sum_probs=146.5
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~----e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...|++.+++++ |. ++.|++++|+ +++..++.+++.+||+|++++|+|......+ ...|+++..++.
T Consensus 70 ~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~g~~v~~v~~ 145 (405)
T PRK09148 70 IPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGF----IMAGGVIRSVPA 145 (405)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHH----HhcCCEEEEEeC
Confidence 445666666554 42 3256666665 9999999999999999999999999865333 345777766643
Q ss_pred C----CHHHHHHhc---cCCCceEEEEeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCcc-----chhcc-
Q 012321 283 A----DMEGLEAAL---NNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSL- 346 (466)
Q Consensus 283 ~----D~e~Le~ai---~~~~tklV~lesPsNPtG~v~dl---~~I~ela~~~gillIvD~t~a~~~~~-----~pl~~- 346 (466)
. +++++++.+ .+ ++++|++++|+||||.+++. ++|.++|+++|+++|+|++|...... .....
T Consensus 146 ~~~~~~~~~l~~~~~~~~~-~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~ 224 (405)
T PRK09148 146 EPDEEFFPALERAVRHSIP-KPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVP 224 (405)
T ss_pred CCCCCCccCHHHHHhhccc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCC
Confidence 1 234444444 34 48999999999999999985 67888999999999999998653211 11111
Q ss_pred ---CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHH
Q 012321 347 ---GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALR 419 (466)
Q Consensus 347 ---gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~~ 419 (466)
+..+++.|+||.++.+| .+.||+++++++++.+++.+.....+.+......+...+ +.++...+++.+++..
T Consensus 225 ~~~~~~i~~~SfSK~~~~pG-lR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~ 303 (405)
T PRK09148 225 GAKDVTVEFTSMSKTFSMAG-WRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDV 303 (405)
T ss_pred CccCcEEEEeccccccCCcc-hheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 23467899999999887 568999999999999988776544333333333222222 3344455667778888
Q ss_pred HHHHHHcC
Q 012321 420 MAKILEAH 427 (466)
Q Consensus 420 La~~L~~~ 427 (466)
+.+.|+++
T Consensus 304 l~~~L~~~ 311 (405)
T PRK09148 304 LVESFGRA 311 (405)
T ss_pred HHHHHHHc
Confidence 88888875
No 152
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.83 E-value=4.9e-19 Score=184.53 Aligned_cols=212 Identities=23% Similarity=0.243 Sum_probs=158.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~--pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~ 285 (466)
.++...+||+++++++|.+.+++++||++|+..++..+.. +|+.|+.....|...... +...|+++..++..|.
T Consensus 88 ~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~ 163 (402)
T TIGR01821 88 TNIPHVELEAELADLHGKESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEG----IRHSGAEKFIFRHNDV 163 (402)
T ss_pred CcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHH----HHHcCCeEEEECCCCH
Confidence 3678899999999999999999999999999998887765 677777665556544322 2345667666666788
Q ss_pred HHHHHhcc---CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---------hhccCCcEEEe
Q 012321 286 EGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLH 353 (466)
Q Consensus 286 e~Le~ai~---~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~---------pl~~gaDivv~ 353 (466)
+++++.++ +.++++|++|+|+||+|.+.|+++|.++|+++|+++|+|++++.+.... .+....|+++.
T Consensus 164 ~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~ 243 (402)
T TIGR01821 164 AHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEG 243 (402)
T ss_pred HHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEE
Confidence 88887775 2248999999999999999999999999999999999999987443211 11123689999
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHHH--hCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~--~G~~ls~~~A~l~lrgL~tl---~~R~e~~~~na~~La~~L~~~ 427 (466)
+++|.+++. ||++++++++++.++..... +....++..+..++..++.+ ..+.+++.++++++.+.|+++
T Consensus 244 t~sKa~g~~----GG~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (402)
T TIGR01821 244 TLAKAFGVV----GGYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL 318 (402)
T ss_pred echhhhccC----CceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999975 48999999999888754432 23345665555544444443 334556668888999999875
No 153
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.83 E-value=7.6e-19 Score=187.76 Aligned_cols=214 Identities=17% Similarity=0.184 Sum_probs=145.7
Q ss_pred HHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHhc-cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-
Q 012321 212 TVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~---e~~v~~~SG~-aAi~~al~all-~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd- 281 (466)
...|++.+++++ |. ++.|++++|+ +++..++.+++ ++||+|++++|.|+.....+ +..|.++..++
T Consensus 117 ~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~----~~~g~~~v~v~~ 192 (481)
T PTZ00377 117 YPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAI----TLLGGKQVPYYL 192 (481)
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHH----HHcCCEEEEEEe
Confidence 445666666554 32 3456566665 99999999998 79999999999999865443 33455554442
Q ss_pred ------CCCHHHHHHhccC-----CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----c
Q 012321 282 ------PADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----K 342 (466)
Q Consensus 282 ------~~D~e~Le~ai~~-----~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~ 342 (466)
..|+++|++++++ .++|+|++++|+||||.+++ +++|+++|+++|+++|+||+|....+. .
T Consensus 193 ~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~ 272 (481)
T PTZ00377 193 DEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFI 272 (481)
T ss_pred ccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcc
Confidence 2478999998864 14899999999999999997 788999999999999999998653221 0
Q ss_pred hh-----ccC-------CcEEEecccccc-ccccCceEEEEEe---ChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---
Q 012321 343 AL-----SLG-------ADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM--- 403 (466)
Q Consensus 343 pl-----~~g-------aDivv~S~sK~l-gG~gdv~gG~vvg---~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL--- 403 (466)
++ .+. .-|+++|+||.+ +.+|+ +.||+++ ++++++++.+.+... .+.+....+++...+
T Consensus 273 s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~Gl-RiG~~~~~~~p~~li~~l~~~~~~~-~~~~~~~Q~a~~~~l~~~ 350 (481)
T PTZ00377 273 SFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGR-RGGYFELTNIPPEVREQIYKLASIN-LCSNVVGQLMTGLMCNPP 350 (481)
T ss_pred cHHHHHHhhcccccCCeEEEEEecCCcccccCCcC-ceEEEEEeCCCHHHHHHHHHHhhee-cCCChHHHHHHHHHhCCC
Confidence 11 111 137889999975 65664 5788875 889999888766432 223333333332222
Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHcCCCcE
Q 012321 404 -----------KTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 404 -----------~tl~~R~e~~~~na~~La~~L~~~p~V~ 431 (466)
+.+....++..++++.+.+.|+++|.+.
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~ 389 (481)
T PTZ00377 351 REGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS 389 (481)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 1122222335677888999999887654
No 154
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.83 E-value=5e-19 Score=181.98 Aligned_cols=206 Identities=17% Similarity=0.203 Sum_probs=145.4
Q ss_pred hHHHHHHHHHhhhC---C-CcEEEeCCHH-HHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCC
Q 012321 211 TTVVVEEKMSALEG---A-ESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD 284 (466)
Q Consensus 211 ~~~~Lee~lA~l~g---~-e~~v~~~SG~-aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D 284 (466)
.++.+.+.+.+..| . ++.|++++|+ +++..++..+ +++||+|++++|+|+..... ....|+++..++ +
T Consensus 67 lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~--~ 140 (364)
T PRK07865 67 LREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVG----ARLAGATVVRAD--S 140 (364)
T ss_pred HHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHH----HHhcCCEEEecC--C
Confidence 34444444444434 2 4567777776 8888877777 79999999999999875433 345688877664 3
Q ss_pred HHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc-h---h-------ccCCcE
Q 012321 285 MEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-A---L-------SLGADL 350 (466)
Q Consensus 285 ~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~-p---l-------~~gaDi 350 (466)
+++++. . ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|....... + + .....+
T Consensus 141 ~~~l~~---~-~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i 216 (364)
T PRK07865 141 LTELGP---Q-RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLL 216 (364)
T ss_pred hhhCCc---c-cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEE
Confidence 444332 3 4899999999999999986 5678888999999999999987532211 1 1 112349
Q ss_pred EEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 351 vv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
++.|+||.++.+| .+.||++++++++++++..+...+...+......+...+ +.+....+...++++.+.+.|+++
T Consensus 217 ~~~S~SK~~~~~G-lRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 295 (364)
T PRK07865 217 AVHSLSKQSNLAG-YRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA 295 (364)
T ss_pred EEeechhccCCCc-eeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999998777 568999999999999988776666555555444443333 334444556677788888888875
No 155
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.83 E-value=7.2e-19 Score=176.45 Aligned_cols=250 Identities=20% Similarity=0.211 Sum_probs=187.5
Q ss_pred ccccCCCccCChHHHHHHHhcc-cCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEc
Q 012321 177 VVNTSAYFFKKTAELIDFKEKR-RASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTT 255 (466)
Q Consensus 177 i~~sst~~~~~~~~~~~~~~~~-~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~ 255 (466)
-++|+++.-++.++++.....+ .+.-.|+ .+|.+.++|+++++++|.+.++|++||++|+.++|.+.++||+.|++.
T Consensus 3 ~f~SDn~~g~~~~m~eam~~a~~~~~~~YG--~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~ 80 (342)
T COG2008 3 DFRSDNVAGPTPEMREALAAANAVGDDVYG--EDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVICH 80 (342)
T ss_pred ccccCccCCCCHHHHHHHHhccccCCCCCC--CCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEEEe
Confidence 3678888888888877766655 4445677 689999999999999999999999999999999999999999999998
Q ss_pred CCCccchHHHHHhhcccC--CcEEEEeC----CCCHHHHHHhccCC-----CceEEEEeCCCCCCccccc---HHHHHHH
Q 012321 256 TDCYRKTRIFIETVLPKM--GITATVID----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDL 321 (466)
Q Consensus 256 ~~~y~~t~~~~~~~l~~~--gi~v~~vd----~~D~e~Le~ai~~~-----~tklV~lesPsNPtG~v~d---l~~I~el 321 (466)
...|-.++..= ..+-+ +.++..++ ..++|+|++.|..+ .+.++++++.+|-.|++++ +++|.++
T Consensus 81 ~~aHi~~~E~G--a~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~ 158 (342)
T COG2008 81 ETAHIYTDECG--APEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAV 158 (342)
T ss_pred ccccceecccC--cHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHH
Confidence 88775543210 01111 23333333 24799999977632 3667777788778899986 5678888
Q ss_pred HHhcCCEEEEeCCC------CCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHH-
Q 012321 322 CHKKGAIVCIDGTF------ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN- 394 (466)
Q Consensus 322 a~~~gillIvD~t~------a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~- 394 (466)
||++|+.|++|.+- +.+........++|++..++||.++.+. +.+++++.+++++++.+++..|+.++..
T Consensus 159 ~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r 235 (342)
T COG2008 159 CKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKAR 235 (342)
T ss_pred HHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhh
Confidence 99999999999982 1123334445689999999999988774 6778899999999999999998876553
Q ss_pred -HHHHHHHhhHHHHHHHHHHHHH--HHHHHHHHHcCCCcEEE
Q 012321 395 -AAYLIIRGMKTLHLRVQQQNST--ALRMAKILEAHPKVKRV 433 (466)
Q Consensus 395 -~A~l~lrgL~tl~~R~e~~~~n--a~~La~~L~~~p~V~~V 433 (466)
-+...+..|++--.++....+| |++|++.|++.|+++..
T Consensus 236 ~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~ 277 (342)
T COG2008 236 FLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLA 277 (342)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceec
Confidence 2333334455444455555677 99999999988887543
No 156
>PRK08175 aminotransferase; Validated
Probab=99.83 E-value=4.7e-19 Score=184.40 Aligned_cols=212 Identities=16% Similarity=0.174 Sum_probs=147.4
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~----e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...|++.+++++ |. ++.+++++|+ +++..++..++++||+|++++|+|+.....+ ...|+++..++.
T Consensus 69 ~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~ 144 (395)
T PRK08175 69 IPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGA----VIAGAQVRSVPL 144 (395)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCeEEEEec
Confidence 345555555543 42 3356666766 8999988899999999999999999854333 345777666643
Q ss_pred ----CCHHHHHHhccC--CCceEEEEeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCcc----ch-hc---
Q 012321 283 ----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ----KA-LS--- 345 (466)
Q Consensus 283 ----~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~dl---~~I~ela~~~gillIvD~t~a~~~~~----~p-l~--- 345 (466)
.+.++++++++. .++++|++++|+||||.+.+. ++|.++|+++|+++|+|++|...... .+ ..
T Consensus 145 ~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~ 224 (395)
T PRK08175 145 VEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPG 224 (395)
T ss_pred ccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCC
Confidence 247788887763 248999999999999999986 68899999999999999998643211 11 11
Q ss_pred -cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHH---HHHHHHh-hHHHHHHHHHHHHHHHHH
Q 012321 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNA---AYLIIRG-MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 346 -~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~---A~l~lrg-L~tl~~R~e~~~~na~~L 420 (466)
.+..+++.|+||.++.+| .+.||+++++++++++.+.+.....+.+... +..++.. -+.+....+.+.++++.+
T Consensus 225 ~~~~~i~~~S~SK~~g~pG-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 303 (395)
T PRK08175 225 AKDVAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVL 303 (395)
T ss_pred cccCEEEEeeccccccCcc-hhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 123477899999998777 4578999999999998877654443322222 2222322 123444455667778888
Q ss_pred HHHHHcCC
Q 012321 421 AKILEAHP 428 (466)
Q Consensus 421 a~~L~~~p 428 (466)
.+.|++++
T Consensus 304 ~~~L~~~~ 311 (395)
T PRK08175 304 VKGLHEAG 311 (395)
T ss_pred HHHHHHcC
Confidence 88888763
No 157
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.83 E-value=9.4e-19 Score=181.62 Aligned_cols=213 Identities=14% Similarity=0.178 Sum_probs=149.9
Q ss_pred hHHHHHHHHHhhhC-------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 211 TTVVVEEKMSALEG-------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~g-------~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
....|++.++++++ .++.+++++|++|+..++.+++++||+|++++|.|...... ++..|+++..++.
T Consensus 67 g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~ 142 (397)
T PRK07568 67 GIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGF----ATSAGVKIVPVTTK 142 (397)
T ss_pred CCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHH----HHHcCCEEEEeecC
Confidence 35677777777752 24555556666999999999999999999999999875432 3445777666542
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----chhcc-
Q 012321 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSL- 346 (466)
Q Consensus 283 -------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~pl~~- 346 (466)
.++++++++++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .....
T Consensus 143 ~~~g~~~~~~~~l~~~~~~~-~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~ 221 (397)
T PRK07568 143 IEEGFHLPSKEEIEKLITPK-TKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLE 221 (397)
T ss_pred cccCCCCCCHHHHHHhcCcc-ceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcC
Confidence 2468899988774 999999999999999984 788999999999999999998643211 11111
Q ss_pred ---CCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHH
Q 012321 347 ---GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTAL 418 (466)
Q Consensus 347 ---gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~ 418 (466)
...+++.|+||.++++|. +.|++++ ++++++.+...... ....+......+...+ +.+....+...+++.
T Consensus 222 ~~~~~~i~~~S~SK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (397)
T PRK07568 222 GLEDRVIIIDSVSKRYSACGA-RIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRD 299 (397)
T ss_pred CCcCCEEEEecchhhccCCCc-ceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 224899999999998774 5788887 46788777654432 1223333333222222 334455566778888
Q ss_pred HHHHHHHcCCCc
Q 012321 419 RMAKILEAHPKV 430 (466)
Q Consensus 419 ~La~~L~~~p~V 430 (466)
.+.+.|++++.+
T Consensus 300 ~l~~~L~~~~~~ 311 (397)
T PRK07568 300 ILYEELNKIPGV 311 (397)
T ss_pred HHHHHHhcCCCc
Confidence 899999887654
No 158
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=2.8e-19 Score=184.50 Aligned_cols=215 Identities=18% Similarity=0.223 Sum_probs=155.5
Q ss_pred CCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
.+|+++.-..|++.+++++|. ++.|++++|+ +++..++.+++++||+|++..|.|+.... .++..|+++..++.
T Consensus 66 ~~Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~----~~~~~g~~~~~v~~ 141 (371)
T PRK05166 66 RLYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHED----YPTMMGARVERVTV 141 (371)
T ss_pred hcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHH----HHHHcCCeEEEeec
Confidence 345555556899999999986 4567777776 89999999999999999999999987543 34456777776643
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcc----ch---hc-c-
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KA---LS-L- 346 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~--~gillIvD~t~a~~~~~----~p---l~-~- 346 (466)
.|+++++++++++ +++|++++|+||||.+++.+++.++++. +++++|+|++|...... .. +. .
T Consensus 142 ~~~~~~~~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 220 (371)
T PRK05166 142 TPDLGFDLDALCAAVARA-PRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARG 220 (371)
T ss_pred CCCCCCCHHHHHHhhhcC-CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcC
Confidence 3789999998774 8999999999999999998777777654 47899999998643321 11 11 1
Q ss_pred CCcEEEeccccccccccCceEEEEE-eChHHHHHHHHHHHHhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHH
Q 012321 347 GADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 347 gaDivv~S~sK~lgG~gdv~gG~vv-g~~eli~~l~~~~~~~G~~ls~~~A~l~---lrgL~tl~~R~e~~~~na~~La~ 422 (466)
...|++.|+||.++.+| ++.||++ +++++++.+++.+..++ .+.+....+ +..-+.++..++...++.+.+.+
T Consensus 221 ~~vi~i~SfSK~~~l~G-lRiG~~i~~~~~l~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 297 (371)
T PRK05166 221 LPWIVLRTFSKAYGLAG-LRVGYGLVSDPELVGLLDRVRTPFN--VNGAAQAAALAALDDEEHLAKGVALALAERERLKK 297 (371)
T ss_pred CCEEEEeechHhhhcch-hheeeeecCCHHHHHHHHHhccCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 12488999999999777 4578866 47888888876554333 333333222 22234555556677778888999
Q ss_pred HHHcC
Q 012321 423 ILEAH 427 (466)
Q Consensus 423 ~L~~~ 427 (466)
.|+++
T Consensus 298 ~L~~~ 302 (371)
T PRK05166 298 ELAEM 302 (371)
T ss_pred HHHHC
Confidence 99887
No 159
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.83 E-value=2.6e-18 Score=177.93 Aligned_cols=210 Identities=13% Similarity=0.079 Sum_probs=165.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
.+.++++++++++++|.+++++++||++|+.+++.++ +++||+|+++.++|..+...+ ...|+++.++|.
T Consensus 30 ~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~----~~~G~~~v~~d~d~~~~ 105 (375)
T PRK11706 30 GGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTM 105 (375)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcC
Confidence 4778999999999999999999999999998887766 689999999999999876443 346888877753
Q ss_pred -CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc--cchhccCCcEEEeccc--c
Q 012321 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKALSLGADLVLHSAT--K 357 (466)
Q Consensus 283 -~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~--~~pl~~gaDivv~S~s--K 357 (466)
.|+++++++++++ +++|++. |++|...|+++|.++|+++|+++|+|++++.+.. .++.....|+.++|++ |
T Consensus 106 ~~d~~~le~~i~~~-tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K 181 (375)
T PRK11706 106 NIDETLIEAAITPK-TRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181 (375)
T ss_pred CcCHHHHHHhcCCC-CeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCc
Confidence 4789999999874 9999974 5789999999999999999999999999876542 2333333588888877 9
Q ss_pred ccccccCceEEEEEeChHHHHHHHHHHHH-------------------hCC--CchHHHHHHHHHhhHHHHHHHHHHHHH
Q 012321 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHV-------------------LGG--ALNPNAAYLIIRGMKTLHLRVQQQNST 416 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~~eli~~l~~~~~~-------------------~G~--~ls~~~A~l~lrgL~tl~~R~e~~~~n 416 (466)
.++.+. .|++++.++++.++++.++.. .|. .++.+.+.+++..++.++...++..++
T Consensus 182 ~l~~g~--gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~ 259 (375)
T PRK11706 182 NYTAGE--GGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLAL 259 (375)
T ss_pred cccccC--CeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 997532 245666677888877766531 122 235566777788888899888899999
Q ss_pred HHHHHHHHHcCC
Q 012321 417 ALRMAKILEAHP 428 (466)
Q Consensus 417 a~~La~~L~~~p 428 (466)
++.+.+.|.+.+
T Consensus 260 ~~~~~~~L~~~~ 271 (375)
T PRK11706 260 WQRYYDALAPLA 271 (375)
T ss_pred HHHHHHHhcCCC
Confidence 999999998876
No 160
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.83 E-value=5.1e-19 Score=182.46 Aligned_cols=217 Identities=21% Similarity=0.255 Sum_probs=167.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
.+.+++||+++++++|.+.++.++||+.|+.+++.++ +++||+|+++..+|..+...+ ...|.++.++|.
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai----~~~G~~pv~~Di~~~~~ 99 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAI----LWAGAEPVFVDIDPETL 99 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHH----HHTT-EEEEE-BETTTS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHH----HHhccEEEEEeccCCcC
Confidence 5899999999999999999999999999999999988 689999999999999876443 346888888874
Q ss_pred -CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc--hhccCCcEEEecc--cc
Q 012321 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--ALSLGADLVLHSA--TK 357 (466)
Q Consensus 283 -~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~--pl~~gaDivv~S~--sK 357 (466)
.|++.++++++++ |++|++ .+..|...|+++|.++|+++|++||.|.+++.+...+ +...-.|+.++|+ +|
T Consensus 100 ~id~~~~~~~i~~~-t~ai~~---~h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K 175 (363)
T PF01041_consen 100 NIDPEALEKAITPK-TKAILV---VHLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPTK 175 (363)
T ss_dssp SB-HHHHHHHHHTT-EEEEEE---E-GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTTS
T ss_pred CcCHHHHHHHhccC-ccEEEE---ecCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCCCC
Confidence 3899999999985 999987 5667999999999999999999999999987764433 2222249999998 59
Q ss_pred ccccccCceEEEEEeC-hHHHHHHHHHHHH-----------------hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 012321 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV-----------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALR 419 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~-~eli~~l~~~~~~-----------------~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~ 419 (466)
.+.... ||+++.+ +++.++++.++.. +...++.+.|.+++..|+.++.++++.++++..
T Consensus 176 ~i~~ge---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~ 252 (363)
T PF01041_consen 176 IITTGE---GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQR 252 (363)
T ss_dssp SS-SSS----EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCcCCC---CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 886553 7888886 5677777765431 123477889999999999999999999999999
Q ss_pred HHHHHHcCCCcEEEeCC
Q 012321 420 MAKILEAHPKVKRVHYP 436 (466)
Q Consensus 420 La~~L~~~p~V~~V~~P 436 (466)
+.+.|.+.+.+.....+
T Consensus 253 y~~~L~~~~~~~~~~~~ 269 (363)
T PF01041_consen 253 YREALAGIPGIKPPPIP 269 (363)
T ss_dssp HHHHHTTGTTEEEEGCG
T ss_pred HHHHHhcCCCccccccc
Confidence 99999999987655443
No 161
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.83 E-value=6.6e-19 Score=180.89 Aligned_cols=205 Identities=17% Similarity=0.213 Sum_probs=141.9
Q ss_pred HHHHHHHHHhhhCC----CcEEEeCCHH-HHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCH
Q 012321 212 TVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 212 ~~~Lee~lA~l~g~----e~~v~~~SG~-aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~ 285 (466)
++++.+.+.+.+|. ++.+++++|+ +++..++..+ +++||+|++++|+|+..... +...|.++..++ ++
T Consensus 62 r~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~--~~ 135 (357)
T TIGR03539 62 REAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVG----ALLAGATPVAAD--DP 135 (357)
T ss_pred HHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHH----HHhcCCEEeccC--Ch
Confidence 34444444443342 3566666665 8988888877 79999999999999875433 344677776654 44
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-ch---h-------ccCCcEE
Q 012321 286 EGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-KA---L-------SLGADLV 351 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-~p---l-------~~gaDiv 351 (466)
++++ ..++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... .+ + .....++
T Consensus 136 ~~l~----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~ 211 (357)
T TIGR03539 136 TELD----PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLA 211 (357)
T ss_pred hhcC----ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEE
Confidence 4332 235899999999999999986 567889999999999999998642211 11 1 1112489
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
+.|+||.++.+| .++||+++++++++++++.+...+...+......+...+ +.+....+++.++++.+.+.|+++
T Consensus 212 ~~S~SK~~~~~G-~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ 289 (357)
T TIGR03539 212 VHSLSKRSNLAG-YRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA 289 (357)
T ss_pred EeccccccCCCc-eeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999998777 568999999999999888776655555555444443333 223334455667777888888875
No 162
>PRK09265 aminotransferase AlaT; Validated
Probab=99.83 E-value=1.2e-18 Score=181.83 Aligned_cols=212 Identities=13% Similarity=0.144 Sum_probs=140.9
Q ss_pred HHHHHHHHHhhh------CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe--C
Q 012321 212 TVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI--D 281 (466)
Q Consensus 212 ~~~Lee~lA~l~------g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v--d 281 (466)
...|++.+++++ +. .+.|++++|+ +++..++.+++++||+|++++|+|......+ ...|..+..+ +
T Consensus 74 ~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~v~~~~~ 149 (404)
T PRK09265 74 LFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAV----SLSGGKPVHYLCD 149 (404)
T ss_pred cHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHH----HHcCCEEEEEecc
Confidence 457888888776 32 3456666666 8889999999999999999999999755433 2345444333 2
Q ss_pred -----CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----chhcc--
Q 012321 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSL-- 346 (466)
Q Consensus 282 -----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~pl~~-- 346 (466)
..|+++++++++++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... ....+
T Consensus 150 ~~~~~~~d~~~l~~~~~~~-~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 228 (404)
T PRK09265 150 EEAGWFPDLDDIRSKITPR-TKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAP 228 (404)
T ss_pred cccCCCCCHHHHHHhcccc-ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCC
Confidence 14789999988764 999999999999999998 888999999999999999998643211 11111
Q ss_pred C-CcEEEeccccccccccCceEEEEEe--ChHH----HHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHH---HHHHH
Q 012321 347 G-ADLVLHSATKFIGGHNDVLAGSISG--SGKL----VTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHL---RVQQQ 413 (466)
Q Consensus 347 g-aDivv~S~sK~lgG~gdv~gG~vvg--~~el----i~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~---R~e~~ 413 (466)
. .-+++.|+||.++.+|. +.||++. ++++ ++.++... ......+....+++...+ +.+.. ..++.
T Consensus 229 ~~~vi~~~S~SK~~~~pGl-RiG~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 306 (404)
T PRK09265 229 DLLCVTFNGLSKAYRVAGF-RVGWMVLSGPKKHAKGYIEGLDMLA-SMRLCANVPAQHAIQTALGGYQSINELILPGGRL 306 (404)
T ss_pred CceEEEEecchhhccCccc-ceEEEEEeCchHHHHHHHHHHHHHh-ccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 1 23678999999988874 5677774 4443 33333221 112223333333322222 22222 22355
Q ss_pred HHHHHHHHHHHHcCCCc
Q 012321 414 NSTALRMAKILEAHPKV 430 (466)
Q Consensus 414 ~~na~~La~~L~~~p~V 430 (466)
.++++.+.+.|+++|.+
T Consensus 307 ~~~r~~~~~~L~~~~~~ 323 (404)
T PRK09265 307 YEQRDRAWELLNAIPGV 323 (404)
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 67778888999887654
No 163
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.83 E-value=1.2e-18 Score=179.60 Aligned_cols=245 Identities=22% Similarity=0.256 Sum_probs=178.3
Q ss_pred cCCCCchhHHHHHHHHHhhhCCCc---EEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCccchHHHHHhhcccCCcEE
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAES---TVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e~---~v~~~SG~aAi~~al~al---l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v 277 (466)
+++......+++++.++++.|++. .+++++++.++..++.++ +++||+|++....|++....+....++.|+++
T Consensus 37 ~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v 116 (371)
T PF00266_consen 37 RSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEV 116 (371)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEE
T ss_pred hhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhh
Confidence 343346678899999999999744 556677779999999998 79999999999999998877777677788888
Q ss_pred EEeC-----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEE
Q 012321 278 TVID-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLV 351 (466)
Q Consensus 278 ~~vd-----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDiv 351 (466)
+.++ ..|+++++++++++ +++|++...+|.+|...|+++|.++||++|+++++|.+++.+.. .+..++|+|++
T Consensus 117 ~~i~~~~~~~~~~~~~~~~l~~~-~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~ 195 (371)
T PF00266_consen 117 RVIPADPGGSLDLEDLEEALNPD-TRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFL 195 (371)
T ss_dssp EEEEEGTTSSCSHHHHHHHHHTT-ESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEE
T ss_pred ccccccccchhhhhhhhhhhccc-cceEEeecccccccEEeeeceehhhhhccCCceeEechhcccccccccccccccee
Confidence 7764 34799999999874 99999999999999999999999999999999999999877644 45556789999
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHH-----------H----------hCCCchHHHHHHHHHhhHHH----
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-----------V----------LGGALNPNAAYLIIRGMKTL---- 406 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~-----------~----------~G~~ls~~~A~l~lrgL~tl---- 406 (466)
+.|.+| ++|+.+ .|+++.+++++++++.... . .+++.+....+.+...++.+
T Consensus 196 ~~s~~K-l~gp~G--~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g 272 (371)
T PF00266_consen 196 VFSSHK-LGGPPG--LGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIG 272 (371)
T ss_dssp EEESTS-TTSSST--EEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHH
T ss_pred eecccc-cCCCCc--hhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccc
Confidence 999999 555542 5899999988888742111 0 11233332222222233322
Q ss_pred -HHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEecee
Q 012321 407 -HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCVF 465 (466)
Q Consensus 407 -~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~~ 465 (466)
+...++..+.++++.+.|++.|.+.. +.|.-. ...+++++|.++++
T Consensus 273 ~~~i~~~~~~l~~~~~~~l~~~~~~~~-~~~~~~------------~~~~~i~~~~~~~~ 319 (371)
T PF00266_consen 273 IERIRERIRELAEYLREALEELPGIEV-LGPDDE------------PRRPSIVSFNLPGS 319 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEE-SSSSCG------------GBGTTEEEEEETTS
T ss_pred cccchhhhhhHHHHHHhhhhcCCceeE-eeeccc------------ccccceEEEeecCC
Confidence 33445667788889999999988743 222111 12467888877653
No 164
>PLN02651 cysteine desulfurase
Probab=99.83 E-value=2.7e-19 Score=184.14 Aligned_cols=222 Identities=17% Similarity=0.185 Sum_probs=154.9
Q ss_pred CCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCccchHHHHHhhcccCCcEEE
Q 012321 205 GRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~al----l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~ 278 (466)
++......+++++.+++++|.+ +.+++++|++++.+++..+ .++||+|++....|++....+.. +...|++++
T Consensus 38 ~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~-~~~~g~~v~ 116 (364)
T PLN02651 38 GWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRH-LQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHH-HHhcCCEEE
Confidence 3333556888999999999973 4555566668877776554 47899999999999886655533 345688887
Q ss_pred EeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccchhccCCcEEE
Q 012321 279 VIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 352 (466)
Q Consensus 279 ~vd~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-~~~pl~~gaDivv 352 (466)
.++. .|+++++++++++ +++|++++++|+||.+.|+++|.++||++|+++++|++++.+. ..+..++|+|+++
T Consensus 117 ~v~~~~~~~~d~~~l~~~i~~~-t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~ 195 (364)
T PLN02651 117 YLPVKSDGLVDLDELAAAIRPD-TALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMS 195 (364)
T ss_pred EEccCCCCcCCHHHHHHhcCCC-cEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEE
Confidence 7753 4799999999875 9999999999999999999999999999999999999988763 3556678999999
Q ss_pred eccccccccccCceEEEEEeChHHHHHHHHHHH-------HhCCCchHHHHHHHHHhhHHH----HHHHHHHHHHHHHHH
Q 012321 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMKTL----HLRVQQQNSTALRMA 421 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~-------~~G~~ls~~~A~l~lrgL~tl----~~R~e~~~~na~~La 421 (466)
.|.+||++++| .|+++.+++...++..... ...++.+....+.+...++.+ +...+++.+.++++.
T Consensus 196 ~s~hK~~gp~G---~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~ 272 (364)
T PLN02651 196 ISGHKIYGPKG---VGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLL 272 (364)
T ss_pred echhhhCCCCc---eEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999855444 5777766654443321111 112223322222222333333 223345556677777
Q ss_pred HHHHc-CCCcE
Q 012321 422 KILEA-HPKVK 431 (466)
Q Consensus 422 ~~L~~-~p~V~ 431 (466)
+.|++ .|+++
T Consensus 273 ~~l~~~~~~~~ 283 (364)
T PLN02651 273 NGLRAKLGGVR 283 (364)
T ss_pred HHHHhhCCCEE
Confidence 77765 46663
No 165
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.83 E-value=7.9e-19 Score=184.45 Aligned_cols=221 Identities=18% Similarity=0.195 Sum_probs=154.9
Q ss_pred CCCccCCC--CchhHHHHHH----HHHhhhCCCcEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhccc
Q 012321 200 ASFEYGRY--GNPTTVVVEE----KMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK 272 (466)
Q Consensus 200 ~~~~Y~R~--~~p~~~~Lee----~lA~l~g~e~~v~-~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~ 272 (466)
.++.++|+ ++|+.+.||+ ++++++|.+.+++ ++||+.|+..++.+++++||+|++++..|++....- .....
T Consensus 58 ~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g-~~~~~ 136 (416)
T PRK13034 58 EGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHG-AKVSL 136 (416)
T ss_pred CCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecC-Cccee
Confidence 35667777 6899999999 9999999999966 589999999999999999999999999998732100 00000
Q ss_pred CCcEE--EEeC------CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc----
Q 012321 273 MGITA--TVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (466)
Q Consensus 273 ~gi~v--~~vd------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~---- 340 (466)
.+... ..++ ..|++++++.++..++++|+++.+. +|...|+++|.++|+++|++|++|++++.+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~ 214 (416)
T PRK13034 137 SGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELDFARFREIADEVGALLMVDMAHIAGLVAAGE 214 (416)
T ss_pred ccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccCHHHHHHHHHHcCCEEEEeCcccccCcccCC
Confidence 11111 1222 2688999988855458999987665 47888999999999999999999999655433
Q ss_pred -cchhccCCcEEEeccccccccccCceEEEEEeChHH-HHHHHHHHHH--hCCCchHHHHHHHHHhhHH----HHHHHHH
Q 012321 341 -QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHV--LGGALNPNAAYLIIRGMKT----LHLRVQQ 412 (466)
Q Consensus 341 -~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~el-i~~l~~~~~~--~G~~ls~~~A~l~lrgL~t----l~~R~e~ 412 (466)
..++. ++|++++|++|+++|+. ||+++++++. .++++..... .+....+..+.+++..++. ...+.++
T Consensus 215 ~~~~~~-~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~ 290 (416)
T PRK13034 215 HPNPFP-HAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQ 290 (416)
T ss_pred CCCCCC-CceEEEEeCcccCCCCC---CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHH
Confidence 33333 58999999999998774 6888776544 4444443211 1112233333333222222 2344688
Q ss_pred HHHHHHHHHHHHHcC
Q 012321 413 QNSTALRMAKILEAH 427 (466)
Q Consensus 413 ~~~na~~La~~L~~~ 427 (466)
..+++++|.+.|++.
T Consensus 291 l~~~a~~l~~~L~~~ 305 (416)
T PRK13034 291 VIANAQALAEVLKER 305 (416)
T ss_pred HHHHHHHHHHHHHHc
Confidence 889999999999876
No 166
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=3.9e-19 Score=181.75 Aligned_cols=208 Identities=20% Similarity=0.252 Sum_probs=148.7
Q ss_pred cCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e--~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
+.||+++. ..|++++++++|.. +.|++++|+ ++|..+ ..++++|| |+++.|+|+..... ++..|+++..+
T Consensus 48 ~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~~~----~~~~g~~~~~v 120 (339)
T PRK06959 48 WRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYAPA----FARHGHRVVPL 120 (339)
T ss_pred HHhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHHHH----HHHCCCEEEee
Confidence 45677887 99999999999973 578888887 787755 45678877 88899999886543 34567887776
Q ss_pred CCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHH---HHhcCCEEEEeCCCCCCCccchh----ccCCcEEEe
Q 012321 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDL---CHKKGAIVCIDGTFATPLNQKAL----SLGADLVLH 353 (466)
Q Consensus 281 d~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~el---a~~~gillIvD~t~a~~~~~~pl----~~gaDivv~ 353 (466)
+..+ + .+.+ .++++++++||||||.+.+.+++.++ |++++.++|+||+|.......++ ....-+++.
T Consensus 121 ~~~~-~----~~~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~ 194 (339)
T PRK06959 121 DEAA-D----TLPA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLR 194 (339)
T ss_pred cccc-h----hccc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEe
Confidence 6533 2 2333 36799999999999999987666555 56789999999998764322211 112238999
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~---lrgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
|+||.++.+| ++.||+++++++++++++.+..++ .+......+ +..-.......++..++++.+.+.|+++
T Consensus 195 SfSK~~gl~G-lRiGy~v~~~~li~~l~~~~~~~~--vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 268 (339)
T PRK06959 195 SVGKFFGLAG-VRAGFVLAAPALLAALRDALGAWT--VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH 268 (339)
T ss_pred cChhhcCCcc-hheEEEecCHHHHHHHHHhcCCCC--CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999777 467999999999999988765443 233333333 2222334445567777888999999886
No 167
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.83 E-value=7e-19 Score=179.64 Aligned_cols=215 Identities=16% Similarity=0.156 Sum_probs=157.1
Q ss_pred chhHHHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC----
Q 012321 209 NPTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID---- 281 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e--~-~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd---- 281 (466)
....+++++.+++++|.+ + .+++++|++|+..++.+++++||+|++..+.|.+.. +...++..|.++.+++
T Consensus 31 ~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 108 (356)
T cd06451 31 LALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDR--WADMAERYGADVDVVEKPWG 108 (356)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHH--HHHHHHHhCCCeEEeecCCC
Confidence 345789999999999972 3 456677789999999999999999999988877632 1233455677777664
Q ss_pred -CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccchhccCCcEEEecccccc
Q 012321 282 -PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFI 359 (466)
Q Consensus 282 -~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-~~~pl~~gaDivv~S~sK~l 359 (466)
..|++++++.++++++++|++++|+||+|.+.|+++|.++|+++|+++++|++++.+. ..+....++|+++.|++|++
T Consensus 109 ~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l 188 (356)
T cd06451 109 EAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKAL 188 (356)
T ss_pred CCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhc
Confidence 3478999999976359999999999999999999999999999999999999976432 23444568899999999999
Q ss_pred ccccCceEEEEEeChHHHHHHHH---HH----------H------HhCCCchHHHHHHHHHhhH-----HHHHHHHHHHH
Q 012321 360 GGHNDVLAGSISGSGKLVTQIRN---LH----------H------VLGGALNPNAAYLIIRGMK-----TLHLRVQQQNS 415 (466)
Q Consensus 360 gG~gdv~gG~vvg~~eli~~l~~---~~----------~------~~G~~ls~~~A~l~lrgL~-----tl~~R~e~~~~ 415 (466)
+++. ..|+++.++++++++.. .. . ..+++.+....+.+...++ .+....++..+
T Consensus 189 ~~p~--g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~ 266 (356)
T cd06451 189 GAPP--GLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRR 266 (356)
T ss_pred cCCC--CcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9875 25899999988877653 00 0 0112222222121112222 23444566677
Q ss_pred HHHHHHHHHHcC
Q 012321 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+++.+.+.|++.
T Consensus 267 ~~~~l~~~L~~~ 278 (356)
T cd06451 267 LAKALREGLEAL 278 (356)
T ss_pred HHHHHHHHHHHc
Confidence 888898988875
No 168
>PRK02948 cysteine desulfurase; Provisional
Probab=99.82 E-value=3.1e-19 Score=184.38 Aligned_cols=216 Identities=15% Similarity=0.170 Sum_probs=154.6
Q ss_pred CchhHHHHHHHHHhhhCC-CcEEEeCCH-HHHHHHHHHHhc----cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 208 GNPTTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~-e~~v~~~SG-~aAi~~al~all----~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
.....+.+++.+++++|. ++.+++++| ++++..++.+++ ++||+|+++...|++...... .++..|+++..++
T Consensus 41 ~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~-~~~~~g~~v~~v~ 119 (381)
T PRK02948 41 ASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQ-SLESQGYTVTEIP 119 (381)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHH-HHHhCCCEEEEEe
Confidence 345678899999999985 456666555 688888887775 578999999988887665543 4566788777764
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccchhccCCcEEEecc
Q 012321 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSA 355 (466)
Q Consensus 282 ~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-~~~pl~~gaDivv~S~ 355 (466)
. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++++|+++..+. ..+..++++|+++.|+
T Consensus 120 ~~~~~~~d~~~l~~~l~~~-~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~ 198 (381)
T PRK02948 120 VDKSGLIRLVDLERAITPD-TVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSA 198 (381)
T ss_pred eCCCCCCCHHHHHHhcCCC-CEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecH
Confidence 2 4789999999774 8999999999999999999999999999999999998765432 2334456899999999
Q ss_pred ccccccccCceEEEEEeChHH-HHHHHH----HHHHhCCCchHHHH---HHHHHh-hHHHHHHHHHHHHHHHHHHHHHHc
Q 012321 356 TKFIGGHNDVLAGSISGSGKL-VTQIRN----LHHVLGGALNPNAA---YLIIRG-MKTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 356 sK~lgG~gdv~gG~vvg~~el-i~~l~~----~~~~~G~~ls~~~A---~l~lrg-L~tl~~R~e~~~~na~~La~~L~~ 426 (466)
||+++.+| .|+++.++++ +..+.. ......++.+.... ..+++. ++.++.+.+++.++++++.+.|++
T Consensus 199 ~K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 275 (381)
T PRK02948 199 HKIYGPKG---VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQT 275 (381)
T ss_pred HhcCCCCc---EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99988766 4677666653 111110 00001122233222 222222 245566677888889999999988
Q ss_pred CC
Q 012321 427 HP 428 (466)
Q Consensus 427 ~p 428 (466)
.+
T Consensus 276 ~~ 277 (381)
T PRK02948 276 LP 277 (381)
T ss_pred CC
Confidence 75
No 169
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.82 E-value=1.5e-18 Score=178.10 Aligned_cols=206 Identities=21% Similarity=0.267 Sum_probs=152.4
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcC---CCccchHHHHHhhcccCCcEEEEeCC
Q 012321 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~---~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
..+..++||+++|+++|. ++++++++|.+|+..++.+++++||+|+++. +.|.... ..++..|.++. ..
T Consensus 52 ~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~----~~~~l~ga~~~--~~ 125 (346)
T TIGR03576 52 PAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIP----RSCKLAGAEYF--ES 125 (346)
T ss_pred CHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHH----HHHHHcCCEEe--cc
Confidence 447899999999999998 8888899999999999999999999999753 4555533 33444566543 33
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCccc---ccHHHHHHHHHhcCCEEEEeCCCCCCCc----c-chhccCCcEEEec
Q 012321 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----Q-KALSLGADLVLHS 354 (466)
Q Consensus 283 ~D~e~Le~ai~~~~tklV~lesPsNPtG~v---~dl~~I~ela~~~gillIvD~t~a~~~~----~-~pl~~gaDivv~S 354 (466)
.++++++. . + ++++|++ +++|++|.+ .|+++|+++|+++|++|++||+|+.++. . .....+.|+++.|
T Consensus 126 ~~l~~l~~-~-~-~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s 201 (346)
T TIGR03576 126 DELSELKK-I-D-GTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTS 201 (346)
T ss_pred CCHHHHhh-C-c-CceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEec
Confidence 45666543 2 3 3788888 557899998 5799999999999999999999987542 1 1234568999999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHc
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl--~~R~e~~~~na~~La~~L~~ 426 (466)
+||+++|. ++|++++++++++.+++....++.+.++..++.++..|+.+ ..+.+...++...+.+.|++
T Consensus 202 ~SKalaG~---r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~ 272 (346)
T TIGR03576 202 TDKLMDGP---RGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK 272 (346)
T ss_pred cchhcccc---ceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh
Confidence 99987665 58999999999999998887766555666666666666553 22334455555555566653
No 170
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.82 E-value=1e-18 Score=186.17 Aligned_cols=210 Identities=16% Similarity=0.236 Sum_probs=144.5
Q ss_pred HHHHHHHHHhhhC---------CCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 212 TVVVEEKMSALEG---------AESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 212 ~~~Lee~lA~l~g---------~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
...|++.|+++++ .++.|++++|+ +++..++.+++.+||.|++++|.|+.....+. ...|+++..++
T Consensus 88 ~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~---~~~g~~~v~v~ 164 (468)
T PLN02450 88 LPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLK---WRTGVEIVPIH 164 (468)
T ss_pred hHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHh---hcCCcEEEEEe
Confidence 3456676766653 13456677776 89999999999999999999999998654332 13566666554
Q ss_pred C-------CCHHHHHHhccC-----CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----
Q 012321 282 P-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (466)
Q Consensus 282 ~-------~D~e~Le~ai~~-----~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----- 341 (466)
. .|++++++++++ .++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+...+.
T Consensus 165 ~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~ 244 (468)
T PLN02450 165 CSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFV 244 (468)
T ss_pred cCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcc
Confidence 2 256888887753 24899999999999999996 567888899999999999998743221
Q ss_pred chhc------------cCCcEEEeccccccccccCceEEEEEeChH-HHHHHHHHHHHhCCCchHHHHHHHHHhhH----
Q 012321 342 KALS------------LGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHVLGGALNPNAAYLIIRGMK---- 404 (466)
Q Consensus 342 ~pl~------------~gaDivv~S~sK~lgG~gdv~gG~vvg~~e-li~~l~~~~~~~G~~ls~~~A~l~lrgL~---- 404 (466)
..+. ...-+++.|+||.++.+| .+.|+++++++ +++.+.+... ++. .+....+++...|+
T Consensus 245 s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~G-lRiG~li~~~~~l~~~~~~~~~-~~~-~s~~~Q~a~~~~L~~~~~ 321 (468)
T PLN02450 245 SVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPG-FRVGAIYSNDEMVVSAATKMSS-FGL-VSSQTQYLLSALLSDKKF 321 (468)
T ss_pred cHHHHhhhcccccCCCCCcEEEEEeccccCCCCC-ccEEEEEECCHHHHHHHHHHhh-cCC-CCHHHHHHHHHHhCCchh
Confidence 1111 123488999999998777 46789998754 5665555432 222 33333333333222
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHcC
Q 012321 405 ---TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 ---tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+....++..++.+.+.+.|+++
T Consensus 322 ~~~~l~~~~~~l~~rr~~l~~~L~~~ 347 (468)
T PLN02450 322 TKNYLEENQKRLKQRQKKLVSGLEAA 347 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 24445666777888888999876
No 171
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.82 E-value=7.3e-19 Score=181.80 Aligned_cols=220 Identities=19% Similarity=0.228 Sum_probs=147.3
Q ss_pred chhHHHHHHHHHhh---hCC--CcEEE-eCCHHHHHHHHHHHhc-----cC-CCEEEEcCCCccchHHHHHhhcccCCcE
Q 012321 209 NPTTVVVEEKMSAL---EGA--ESTVI-MASGMSASTVMLLALV-----PA-GGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 209 ~p~~~~Lee~lA~l---~g~--e~~v~-~~SG~aAi~~al~all-----~p-GD~VLv~~~~y~~t~~~~~~~l~~~gi~ 276 (466)
.+....+++.++++ .++ ++.++ ++++++++..++.++. ++ +|+|+++...|++..... ..++..|++
T Consensus 38 ~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~-~~~~~~G~~ 116 (382)
T TIGR03403 38 TATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATC-AFLESLGVE 116 (382)
T ss_pred HHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHH-HHHHHCCCE
Confidence 44455555555444 443 34454 5555589998888752 45 478999999998866554 345667888
Q ss_pred EEEeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC-CccchhccCCcE
Q 012321 277 ATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADL 350 (466)
Q Consensus 277 v~~vd~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~-~~~~pl~~gaDi 350 (466)
+..++. .|+++++++++++ +++|++++|+||||.+.|+++|.++|+++|+++++|++++.+ ...+..++|+|+
T Consensus 117 v~~v~~~~~g~~d~~~l~~~i~~~-t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~ 195 (382)
T TIGR03403 117 VTYLPINEQGTITAEQVREAITEK-TALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDF 195 (382)
T ss_pred EEEEecCCCCCCCHHHHHHhcccC-CeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccccCCCE
Confidence 887753 3789999999875 899999999999999999999999999999999999998765 334555678999
Q ss_pred EEeccccccccccCceEEEEEeChHHH-HH-HHH---HHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHH
Q 012321 351 VLHSATKFIGGHNDVLAGSISGSGKLV-TQ-IRN---LHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMA 421 (466)
Q Consensus 351 vv~S~sK~lgG~gdv~gG~vvg~~eli-~~-l~~---~~~~~G~~ls~~~A~l~lrgL~----tl~~R~e~~~~na~~La 421 (466)
++.|++|+++++| .|+++.++++. .. +.. ......++.+....+.+...++ .++...++..+.++++.
T Consensus 196 ~~~s~~K~~gp~G---~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~ 272 (382)
T TIGR03403 196 LSFSAHKFHGPKG---VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLE 272 (382)
T ss_pred EEEcchhhCCCCc---eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999987666 35555443321 01 000 0000012222222222222222 24445566777888899
Q ss_pred HHHHcCCCcEEE
Q 012321 422 KILEAHPKVKRV 433 (466)
Q Consensus 422 ~~L~~~p~V~~V 433 (466)
+.|++.|.+..+
T Consensus 273 ~~L~~~~~~~~~ 284 (382)
T TIGR03403 273 DALLELPDVFVV 284 (382)
T ss_pred HHHhcCCCEEEE
Confidence 999888877443
No 172
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.82 E-value=3e-18 Score=178.86 Aligned_cols=211 Identities=14% Similarity=0.132 Sum_probs=143.7
Q ss_pred HHHHHHHHHhhhCC---Cc-EEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-----
Q 012321 212 TVVVEEKMSALEGA---ES-TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID----- 281 (466)
Q Consensus 212 ~~~Lee~lA~l~g~---e~-~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd----- 281 (466)
++.+.+.+.+.+|. .+ .|++++|+ +++..++.+++.+||.|++++|+|+..... +...|+++..++
T Consensus 77 R~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~~~~~ 152 (403)
T PRK08636 77 RLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQA----FILAGGNVHKMPLEYNE 152 (403)
T ss_pred HHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHhcCCEEEEEeccccc
Confidence 44444444444453 23 57677776 999999999999999999999999986543 334566665542
Q ss_pred --CCCHH----HHHHhccC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ch-hc
Q 012321 282 --PADME----GLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-LS 345 (466)
Q Consensus 282 --~~D~e----~Le~ai~~--~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~p-l~ 345 (466)
..|++ .+++++++ .++++|++++|+||||.+++ +++|.++|++|++++|+|++|...... .+ ..
T Consensus 153 ~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~ 232 (403)
T PRK08636 153 DFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILE 232 (403)
T ss_pred cCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhc
Confidence 23444 45666642 25899999999999999986 577888899999999999998754321 11 11
Q ss_pred c----CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc---hHHHHHHHHHh-hHHHHHHHHHHHHHH
Q 012321 346 L----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL---NPNAAYLIIRG-MKTLHLRVQQQNSTA 417 (466)
Q Consensus 346 ~----gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l---s~~~A~l~lrg-L~tl~~R~e~~~~na 417 (466)
. ...+++.|+||.++.+| .+.||+++++++++.+++.....+... ....+..++.+ .+.+....+.+.++.
T Consensus 233 ~~~~~~~~i~~~S~SK~~~~~G-lRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (403)
T PRK08636 233 VEGAKDVAVESYTLSKSYNMAG-WRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRR 311 (403)
T ss_pred CCCccccEEEEEecccccCCcc-ceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 1 12355789999998777 568999999999998887665432222 22222223332 233444455667778
Q ss_pred HHHHHHHHcC
Q 012321 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+.+.+.|+++
T Consensus 312 ~~l~~~L~~~ 321 (403)
T PRK08636 312 DVLIESFANA 321 (403)
T ss_pred HHHHHHHHHC
Confidence 8888888875
No 173
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.82 E-value=2.6e-18 Score=179.25 Aligned_cols=212 Identities=20% Similarity=0.224 Sum_probs=158.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~--pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~ 285 (466)
.++...+|+++|++++|.+.+++++||++|+..++..+.. +++.|+.....|......+ ...++++..+...|+
T Consensus 89 ~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~----~~~~~~~~~~~~~d~ 164 (407)
T PRK09064 89 TNHYHVELERELADLHGKEAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGI----RRSRCEKHIFRHNDV 164 (407)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHH----HHcCCcEEEECCCCH
Confidence 4788999999999999998999999999998888877654 7777776655565543222 234566666666788
Q ss_pred HHHHHhccC---CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---------hhccCCcEEEe
Q 012321 286 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLH 353 (466)
Q Consensus 286 e~Le~ai~~---~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~---------pl~~gaDivv~ 353 (466)
+++++.++. .++++|++|+|+|++|.+.|+++|.++|+++|++||+||+|+.+.+.. .+....|+++.
T Consensus 165 ~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~ 244 (407)
T PRK09064 165 AHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEG 244 (407)
T ss_pred HHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEE
Confidence 888887752 348999999999999999999999999999999999999987443210 11123589999
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHHH--hCCCchHHHHHHHHHhhHHHH---HHHHHHHHHHHHHHHHHHcC
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~--~G~~ls~~~A~l~lrgL~tl~---~R~e~~~~na~~La~~L~~~ 427 (466)
|++|.|++. ||++++++++++.++..... +....++..+..++..++.+. .+.++..++++++.+.|++.
T Consensus 245 t~sKa~g~~----GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (407)
T PRK09064 245 TLAKAFGVM----GGYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA 319 (407)
T ss_pred ecchhhhcc----CceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999875 48999999999888765432 233455655555555555543 33567788889999999875
No 174
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.82 E-value=1e-18 Score=179.57 Aligned_cols=216 Identities=15% Similarity=0.104 Sum_probs=151.5
Q ss_pred CCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
.+|+++....|++.|+++++. ++.|++++|+ ++|..++.++. +||.|++++|+|...... ++..|+++..++.
T Consensus 52 ~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 126 (360)
T PRK07392 52 RHYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRRA----LRAFGATVKELPL 126 (360)
T ss_pred hcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHHH----HHHcCCeEEEEec
Confidence 334455567899999999975 4456666666 89988888754 689999999999886543 3445666655532
Q ss_pred ----------CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc----chh---c
Q 012321 283 ----------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL---S 345 (466)
Q Consensus 283 ----------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~----~pl---~ 345 (466)
.+++++++... +++++++++|+||||.+++.++|.++++++++ +|+||+|...... ... .
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~ 203 (360)
T PRK07392 127 PLDQPSPGLTLRLQTLPPQLT--PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLA 203 (360)
T ss_pred ccccCCcccccCHHHHHHhcc--CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhh
Confidence 23555555442 47999999999999999999999999999985 6779998654321 111 1
Q ss_pred -cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---HHHHHHHHHHHHHHHHH
Q 012321 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMA 421 (466)
Q Consensus 346 -~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~---tl~~R~e~~~~na~~La 421 (466)
...-+++.|+||.++.+| ++.||+++++++++++...+.. ...+....+++...++ ......+...++++.+.
T Consensus 204 ~~~~vi~i~S~SK~~~l~G-lRiG~~v~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 280 (360)
T PRK07392 204 EYPNLIILRSLTKFYSLPG-LRLGYAIAHPDRLQRWQQWRDP--WPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALF 280 (360)
T ss_pred cCCCEEEEEechhhhcCCc-hheeeeeCCHHHHHHHHhhCCC--CCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 123488999999999777 4689999999998888765432 3345555444444333 22323345667788899
Q ss_pred HHHHcCCCcE
Q 012321 422 KILEAHPKVK 431 (466)
Q Consensus 422 ~~L~~~p~V~ 431 (466)
+.|+.++++.
T Consensus 281 ~~L~~~~~~~ 290 (360)
T PRK07392 281 QGLASLPGLT 290 (360)
T ss_pred HHHHhCCCcE
Confidence 9998877653
No 175
>PLN02822 serine palmitoyltransferase
Probab=99.82 E-value=3.1e-18 Score=183.15 Aligned_cols=214 Identities=17% Similarity=0.162 Sum_probs=163.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~ 287 (466)
..+...+||++|+++++.++++++++|..++..++.+++++||.|++....|...... +...+.++.+++..|.+.
T Consensus 152 ~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~----~~ls~~~~~~~~~nd~~~ 227 (481)
T PLN02822 152 TIDVHLDCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNG----LYLSRSTIVYFKHNDMES 227 (481)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHHH----HHHcCCeEEEECCCCHHH
Confidence 4567899999999999999999999999889999999999999999887777654332 223356777788777777
Q ss_pred HHHhccC--------CCc-eEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc-------hhc---cCC
Q 012321 288 LEAALNN--------NNV-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------ALS---LGA 348 (466)
Q Consensus 288 Le~ai~~--------~~t-klV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~-------pl~---~ga 348 (466)
++..+++ .++ ++|++|.++|++|.+.|+++|.++|++||++||+||+|+.+.+.+ -.. ...
T Consensus 228 l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~ 307 (481)
T PLN02822 228 LRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKI 307 (481)
T ss_pred HHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCC
Confidence 6665531 124 799999999999999999999999999999999999987554321 011 146
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKI 423 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~tl---~~R~e~~~~na~~La~~ 423 (466)
||++.|++|.++.. ||++++++++++.++.... .++..+++..+..++..++.+ ...+++.+++.+.+.+.
T Consensus 308 dii~~s~sKalg~~----GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~ 383 (481)
T PLN02822 308 DIITAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKG 383 (481)
T ss_pred eEEEecchhhhhhC----CeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 89999999999865 4899999999988774332 334445566555444444333 45677888999999999
Q ss_pred HHcCCC
Q 012321 424 LEAHPK 429 (466)
Q Consensus 424 L~~~p~ 429 (466)
|++.++
T Consensus 384 L~~~~g 389 (481)
T PLN02822 384 LSDIPG 389 (481)
T ss_pred HHhcCC
Confidence 988644
No 176
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.82 E-value=3.1e-18 Score=178.97 Aligned_cols=211 Identities=20% Similarity=0.221 Sum_probs=157.9
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~--pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e 286 (466)
.+...+||++|++++|.+.+++++||++|+..++..+.. +||.|++....|+.+...+ ...|.++..++..|++
T Consensus 89 ~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~----~~~g~~~~~~~~~d~~ 164 (406)
T PRK13393 89 NHYHVLLEAELADLHGKEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGI----RHSRAEKRIFRHNDPA 164 (406)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHH----HHcCCeEEEeCCCCHH
Confidence 457899999999999999999999999999998887765 7888877777777655433 2346666667777888
Q ss_pred HHHHhcc---CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---------hhccCCcEEEec
Q 012321 287 GLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHS 354 (466)
Q Consensus 287 ~Le~ai~---~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~---------pl~~gaDivv~S 354 (466)
++++.++ +.++++|++|+++|++|.+.|+++|.++|+++|+++|+|++++.+++.. ......|+++.|
T Consensus 165 ~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~t 244 (406)
T PRK13393 165 DLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGT 244 (406)
T ss_pred HHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEe
Confidence 8877764 2247999999999999999999999999999999999999987443211 111235888999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHHHHH--hCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~--~G~~ls~~~A~l~lrgL~tl---~~R~e~~~~na~~La~~L~~~ 427 (466)
++|.+++. ||++++++++++.++..... ++...++..+..++..++.+ ..+.++..++.+++.+.|++.
T Consensus 245 lsKa~g~~----GG~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (406)
T PRK13393 245 LAKAFGVM----GGYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA 318 (406)
T ss_pred Cchhhccc----CceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999975 48999999998888765433 24445555444444444433 333455667888899988864
No 177
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.82 E-value=1.8e-18 Score=176.91 Aligned_cols=216 Identities=16% Similarity=0.160 Sum_probs=151.6
Q ss_pred hhHHHHHHHHHhhhCCC-cEEEeCC-HHHHHHHHHHHhcc----CC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 210 PTTVVVEEKMSALEGAE-STVIMAS-GMSASTVMLLALVP----AG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e-~~v~~~S-G~aAi~~al~all~----pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...+++++++++++|.+ +.+++++ +++++..++.++.. +| ++|++....|++....+. .++..|+++..++.
T Consensus 42 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-~~~~~G~~v~~v~~ 120 (353)
T TIGR03235 42 KAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIR-ALERNGFTVTYLPV 120 (353)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHH-HHHhcCCEEEEEcc
Confidence 45678999999999973 4455555 56899888887753 56 789998888887665543 34556888887753
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEeccc
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~s 356 (466)
.|+++++++++++ +++|++++|+||||.+.|+++|.++|+++|+++++|++++.+.. .+...+++|+++.|++
T Consensus 121 ~~~~~~d~~~l~~~l~~~-~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~ 199 (353)
T TIGR03235 121 DESGRIDVDELADAIRPD-TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGH 199 (353)
T ss_pred CCCCcCCHHHHHHhCCCC-CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehh
Confidence 4799999999874 89999999999999999999999999999999999999776543 3333568999999999
Q ss_pred cccccccCceEEEEEeChHHHHH--HHHHHH-------HhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHH
Q 012321 357 KFIGGHNDVLAGSISGSGKLVTQ--IRNLHH-------VLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 357 K~lgG~gdv~gG~vvg~~eli~~--l~~~~~-------~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~~La~~ 423 (466)
|+++.+| .|+++.+++.... ++.... ...++.+....+.+...+ +.++.+.+++.+.+..+.+.
T Consensus 200 K~~gp~g---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~ 276 (353)
T TIGR03235 200 KIYGPKG---IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDA 276 (353)
T ss_pred hcCCCCc---eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9976554 5777777654322 111000 011222221111111122 23455667788888888888
Q ss_pred HHcCCCcE
Q 012321 424 LEAHPKVK 431 (466)
Q Consensus 424 L~~~p~V~ 431 (466)
|++ ++++
T Consensus 277 l~~-~g~~ 283 (353)
T TIGR03235 277 LQT-LGVK 283 (353)
T ss_pred hcc-CCeE
Confidence 876 5554
No 178
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.81 E-value=2.2e-18 Score=176.93 Aligned_cols=215 Identities=14% Similarity=0.204 Sum_probs=152.3
Q ss_pred CCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
.+|+++....|+++++++++. .+.|++++|+ +++..++.++ .+ +.|++++|+|+..... +...|+++..++.
T Consensus 49 ~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~~----~~~~g~~~~~~~~ 122 (354)
T PRK06358 49 VEYPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT-KP-KKVLILAPTFAEYERA----LKAFDAEIEYAEL 122 (354)
T ss_pred hcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-CC-CcEEEecCChHHHHHH----HHHcCCeeEEEeC
Confidence 345566678999999999986 4566666666 8998888775 44 6899999999875433 3445666655532
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----hhc---
Q 012321 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----ALS--- 345 (466)
Q Consensus 283 -------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~----pl~--- 345 (466)
.| +++.+.+.+ ++++|++++|+||||.+++ +++|.++|+++++++|+|++|....... ++.
T Consensus 123 ~~~~~~~~d-~~~~~~~~~-~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~ 200 (354)
T PRK06358 123 TEETNFAAN-EIVLEEIKE-EIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLE 200 (354)
T ss_pred ccccCCCcc-HHHHHhhcc-CCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhcc
Confidence 34 455555655 4899999999999999996 6788888999999999999986543221 111
Q ss_pred -cCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHH
Q 012321 346 -LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRM 420 (466)
Q Consensus 346 -~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~L 420 (466)
...-|++.|+||.++.+| ++.||+++ ++++++.++.....+ ..+....+++...+ +.+...++...++++.+
T Consensus 201 ~~~~vi~~~S~SK~~gl~G-~RiG~lv~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l 277 (354)
T PRK06358 201 NFKNLIIIRAFTKFFAIPG-LRLGYGLTSNKNLAEKLLQMREPW--SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFL 277 (354)
T ss_pred CCCCEEEEEechhhccCcc-hhheeeecCCHHHHHHHHHhCCCC--cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 123488999999999777 45788887 567888887765432 33444444443333 33455666778888899
Q ss_pred HHHHHcCCCc
Q 012321 421 AKILEAHPKV 430 (466)
Q Consensus 421 a~~L~~~p~V 430 (466)
.+.|++++++
T Consensus 278 ~~~L~~~~~~ 287 (354)
T PRK06358 278 YNGLSEFKGI 287 (354)
T ss_pred HHHHhcCCCc
Confidence 9999887664
No 179
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.81 E-value=3.5e-18 Score=175.59 Aligned_cols=210 Identities=21% Similarity=0.248 Sum_probs=172.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~---- 283 (466)
.|.+.++|++++++.|.+.++.++||+.|+.++++++ +.|||+||++..+|..+...+ -..|.+..++|.+
T Consensus 33 G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i----~~~Ga~PVFvDid~~T~ 108 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAV----LLVGAKPVFVDIDPDTL 108 (374)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHH----HHcCCeEEEEecCCccc
Confidence 5889999999999999999999999999999999966 699999999999999877544 2357788887743
Q ss_pred --CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccC--CcEEEecc--cc
Q 012321 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSA--TK 357 (466)
Q Consensus 284 --D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~g--aDivv~S~--sK 357 (466)
|++.||++|+++ ||+|+. .+-.|...|+++|.++|++||++||.|.+++.+...+....| .|+.++|| +|
T Consensus 109 nid~~~ie~aIt~~-tKAIip---Vhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K 184 (374)
T COG0399 109 NIDPDLIEAAITPR-TKAIIP---VHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATK 184 (374)
T ss_pred CCCHHHHHHHcccC-CeEEEE---ehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCC
Confidence 899999999986 999985 567799999999999999999999999998776544433333 48888887 58
Q ss_pred ccccccCceEEEEEeC-hHHHHHHHHHHHH--------------hC--CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 012321 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV--------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~-~eli~~l~~~~~~--------------~G--~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~L 420 (466)
.+.... ||+++++ +++.++++.++.. .| ..++.+.|.+.+..|+.++.++++.+++++.+
T Consensus 185 ~ittgE---GGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y 261 (374)
T COG0399 185 NLTTGE---GGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIY 261 (374)
T ss_pred CccccC---ceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887653 7888886 4677777655431 12 23566788888999999999999999999999
Q ss_pred HHHHHcCCC
Q 012321 421 AKILEAHPK 429 (466)
Q Consensus 421 a~~L~~~p~ 429 (466)
.+.|++.+.
T Consensus 262 ~~~l~~~~~ 270 (374)
T COG0399 262 AEALKGLPG 270 (374)
T ss_pred HHHhhcCCC
Confidence 999998764
No 180
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=1.5e-18 Score=177.96 Aligned_cols=210 Identities=12% Similarity=0.108 Sum_probs=145.7
Q ss_pred CchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 208 GNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
+++....|++.++++++. .+.|++++|+ +++..++.+++++||+|++++|+|...... ....|..+..++.
T Consensus 63 ~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~----~~~~g~~~~~~~l~~~ 138 (357)
T PRK14809 63 PKASHADLTAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMS----ARYHHGEVREYPVSKA 138 (357)
T ss_pred CCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHH----HHHcCCeEEEEecccC
Confidence 344567899999999985 4566666666 899999999999999999999999753322 2233444443321
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCccch----hc-cCCcEE
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKA----LS-LGADLV 351 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~--gillIvD~t~a~~~~~~p----l~-~gaDiv 351 (466)
.+.+++++.+. ++++|++++|+||||.+++.+++.++++.. ++++|+||+|........ .. ...-++
T Consensus 139 ~~~~~~~~~~~~~~~--~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~ 216 (357)
T PRK14809 139 DDFEQTADTVLDAYD--GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAV 216 (357)
T ss_pred cCCCcCHHHHHHhhc--CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEE
Confidence 24566666553 379999999999999999987777776653 789999999875432111 11 123488
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHc
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L~~ 426 (466)
+.|+||.++.+| ++.||+++++++++++++....+ ..+...++.++..+ +.++...+...++.+.+.+.|..
T Consensus 217 ~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 291 (357)
T PRK14809 217 LRTFSKAYGLAG-LRLGYAVVPEEWADAYARVNTPF--AASELACRAGLAALDDDEHVERTVETARWAREYIREELDA 291 (357)
T ss_pred EecchhHhcCcc-hhheeeecCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 899999999777 46799999999999888765433 33444444443333 33444455566666777777754
No 181
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=1.3e-18 Score=177.52 Aligned_cols=210 Identities=16% Similarity=0.174 Sum_probs=149.4
Q ss_pred cCCCCchhHHHHHHHHHhhhC---C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEE
Q 012321 204 YGRYGNPTTVVVEEKMSALEG---A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g---~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~ 278 (466)
+++|+.+....|+++++++++ . ++.|++++|+ ++|..++.++ |+|++.+|+|..... .++..|+++.
T Consensus 50 ~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~----~~~~~g~~~~ 121 (335)
T PRK14808 50 LRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRI----FAKAVGAKFL 121 (335)
T ss_pred hhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh----CcEEECCCCHHHHHH----HHHHcCCeEE
Confidence 455666678899999999987 2 4567777776 8998888776 789999999987553 3445677777
Q ss_pred EeCCCC---HHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc--h-hc-cCCcEE
Q 012321 279 VIDPAD---MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--A-LS-LGADLV 351 (466)
Q Consensus 279 ~vd~~D---~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~--p-l~-~gaDiv 351 (466)
.++..+ ++.. .+. ++++|++++|+||||.+++.+++.+++ ++++++|+||+|....... + +. ...-++
T Consensus 122 ~v~~~~~~~~~~~--~~~--~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~ 196 (335)
T PRK14808 122 EVPLTKDLRIPEV--NVG--EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAV 196 (335)
T ss_pred EecCCCcCCCChh--Hcc--CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEE
Confidence 665421 1111 232 378999999999999999999999998 5799999999987532111 1 11 223488
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA-LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~-ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
+.|+||.++.+| .+.||+++++++++++++.+..++.. +....+..++...+.+..++++..++.+.+.+.|+++
T Consensus 197 ~~S~SK~~~l~G-lRvG~~v~~~~~~~~l~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 272 (335)
T PRK14808 197 IRTFSKAFSLAA-QRIGYVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_pred EEechhhccCcc-cceEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999777 46799999999999988766433322 2222333334444455566667777788888999876
No 182
>PRK05839 hypothetical protein; Provisional
Probab=99.81 E-value=2.8e-18 Score=177.45 Aligned_cols=209 Identities=15% Similarity=0.080 Sum_probs=140.0
Q ss_pred hhHHHHHHHHHhhhCC---CcEEEeCCHH-HHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC
Q 012321 210 PTTVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~---e~~v~~~SG~-aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~ 283 (466)
..++++.+.+++.+|. ++.|++++|+ +++..++..++ ++||.|+++.|+|+..... +...|+++..++..
T Consensus 64 ~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~----~~~~g~~v~~v~~~ 139 (374)
T PRK05839 64 SLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGA----AIASRAKVLLMPLT 139 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHH----HHhcCCEEEEeecc
Confidence 3445555555665562 5667777776 78888877764 5799999999999885543 34567877776532
Q ss_pred -----CHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc---h-h-------
Q 012321 284 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-L------- 344 (466)
Q Consensus 284 -----D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~---p-l------- 344 (466)
+++..+..+ + ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|....... . .
T Consensus 140 ~~~~~~~d~~~~~~-~-~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~ 217 (374)
T PRK05839 140 KENDFTPSLNEKEL-Q-EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVG 217 (374)
T ss_pred cccCCcCCcchhhh-c-cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccC
Confidence 122222223 3 4899999999999999986 5677888999999999999987532111 1 1
Q ss_pred --ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHH
Q 012321 345 --SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALR 419 (466)
Q Consensus 345 --~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~---lrgL~tl~~R~e~~~~na~~ 419 (466)
..+.-|++.|+||.++.+| .+.||++++++++++++......+.+.+......+ +..-+.++...++..++.+.
T Consensus 218 ~~~~~~vi~~~SfSK~~~~~G-lRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 296 (374)
T PRK05839 218 NESFKNVLVINSISKRSSAPG-LRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKL 296 (374)
T ss_pred ccccCcEEEEeccccccCCcc-ceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 1123488999999998887 56899999999999988776554444333322222 22223344445556666666
Q ss_pred HHHHHH
Q 012321 420 MAKILE 425 (466)
Q Consensus 420 La~~L~ 425 (466)
+.+.|.
T Consensus 297 ~~~~l~ 302 (374)
T PRK05839 297 AREILG 302 (374)
T ss_pred HHHhcC
Confidence 766663
No 183
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.80 E-value=8.9e-18 Score=168.90 Aligned_cols=217 Identities=17% Similarity=0.203 Sum_probs=154.8
Q ss_pred CchhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 208 GNPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g--------~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
..+...++++.++++++ .++.+++++|++++..++.++.++||+|+++.+.|.+....+ +..|+++..
T Consensus 34 ~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~----~~~~~~~~~ 109 (350)
T cd00609 34 PDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAA----RLAGAEVVP 109 (350)
T ss_pred CCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHCCCEEEE
Confidence 34445556666666554 345677777789999999999999999999999999866443 445666666
Q ss_pred eCCC-----CH--HHHHHhccCCCceEEEEeCCCCCCcccccHHH---HHHHHHhcCCEEEEeCCCCCCCc--------c
Q 012321 280 IDPA-----DM--EGLEAALNNNNVSLFFTESPTNPFLRCVDVKL---VSDLCHKKGAIVCIDGTFATPLN--------Q 341 (466)
Q Consensus 280 vd~~-----D~--e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~---I~ela~~~gillIvD~t~a~~~~--------~ 341 (466)
++.. +. +.++..+++ ++++|++++|+||+|.+.|+++ |.++|+++|+++|+|++++.+.. .
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~-~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~ 188 (350)
T cd00609 110 VPLDEEGGFLLDLELLEAAKTP-KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALA 188 (350)
T ss_pred EecccccCCccCHHHHHhhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccccccc
Confidence 6532 22 556666655 4999999999999999998654 55899999999999999865322 1
Q ss_pred chhccCCcEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHH
Q 012321 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (466)
Q Consensus 342 ~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~n 416 (466)
.....+.|+++.|++|+++.++ ..+|++++++ ++++.++..........+...+..+...+ +.++...+++.++
T Consensus 189 ~~~~~~~~~~~~s~~K~~~~~g-~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 267 (350)
T cd00609 189 LLDAYERVIVLRSFSKTFGLPG-LRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRR 267 (350)
T ss_pred CcCccCcEEEEeecccccCCcc-cceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 2334567899999999998333 3579999988 78888887766543444443333333222 3445556677888
Q ss_pred HHHHHHHHHcCCCc
Q 012321 417 ALRMAKILEAHPKV 430 (466)
Q Consensus 417 a~~La~~L~~~p~V 430 (466)
++++.+.|++++..
T Consensus 268 ~~~l~~~L~~~~~~ 281 (350)
T cd00609 268 RDALLEALKELGPL 281 (350)
T ss_pred HHHHHHHHHhcCCc
Confidence 99999999987654
No 184
>PLN02231 alanine transaminase
Probab=99.80 E-value=9.5e-18 Score=181.34 Aligned_cols=217 Identities=16% Similarity=0.203 Sum_probs=144.0
Q ss_pred hhHHHHHHHHHhhhCC---CcEEEeCCHH-HHHHHHHHHhc-cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC---
Q 012321 210 PTTVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~---e~~v~~~SG~-aAi~~al~all-~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd--- 281 (466)
+.++.+.+.+.+..|. ++.|++++|. +|+..++..++ .+||.|+++.|.|+.....+ ...|.++..++
T Consensus 172 ~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~----~~~g~~~v~~~l~~ 247 (534)
T PLN02231 172 GLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASI----ALHGGTLVPYYLDE 247 (534)
T ss_pred HHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHH----HHcCCEEEEEecCc
Confidence 3344444444443342 3455555555 99999999988 48999999999999865433 34455554442
Q ss_pred ----CCCHHHHHHhccCC-----CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc--c---hh
Q 012321 282 ----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--K---AL 344 (466)
Q Consensus 282 ----~~D~e~Le~ai~~~-----~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~--~---pl 344 (466)
..|+++|++++++. ++|+|++++|+||||.+++ +++|+++|+++|++||+||+|...... . ++
T Consensus 248 ~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~ 327 (534)
T PLN02231 248 ATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSF 327 (534)
T ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccH
Confidence 34789999888641 4899999999999999985 678899999999999999998754321 1 11
Q ss_pred -c----cC------CcEEEecccccc-ccccCceEEEEEe---ChHHHHHHHHHHHHhC-CC-chHHHHHHHHHh-----
Q 012321 345 -S----LG------ADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLG-GA-LNPNAAYLIIRG----- 402 (466)
Q Consensus 345 -~----~g------aDivv~S~sK~l-gG~gdv~gG~vvg---~~eli~~l~~~~~~~G-~~-ls~~~A~l~lrg----- 402 (466)
. .| .-++++|+||.+ +.+| .++||++. ++++++.+.+...... .. .....+..++..
T Consensus 328 ~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pG-lRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~ 406 (534)
T PLN02231 328 KKVARSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGD 406 (534)
T ss_pred HHHHhhhccccCCceEEEEeccCcccccCCc-cceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCc
Confidence 1 11 137789999976 5455 46888875 6788888877654221 11 122222223321
Q ss_pred ------hHHHHHHHHHHHHHHHHHHHHHHcCCCcE
Q 012321 403 ------MKTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 403 ------L~tl~~R~e~~~~na~~La~~L~~~p~V~ 431 (466)
++......+.+.++++.+.+.|++++++.
T Consensus 407 ~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~ 441 (534)
T PLN02231 407 ESYESYMAEKDGILSSLARRAKTLEDALNSLEGVT 441 (534)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 11222234567788899999999887665
No 185
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.80 E-value=3.9e-18 Score=178.23 Aligned_cols=170 Identities=15% Similarity=0.164 Sum_probs=138.8
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e---~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
....+++++.+++++|.+ ..++.++|+.++..++..++++||+||+.++.|.+.. +...++..|++++.++.
T Consensus 41 ~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~ 118 (401)
T PLN02409 41 PALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWG 118 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCC
Confidence 456788899999999863 3566677789999999999999999999998887643 23456677888777642
Q ss_pred --CCHHHHHHhccC---CCceEEEEeCCCCCCcccccHHHHHHH--HHhcCCEEEEeCCCCCCCc-cchhccCCcEEEec
Q 012321 283 --ADMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDL--CHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (466)
Q Consensus 283 --~D~e~Le~ai~~---~~tklV~lesPsNPtG~v~dl~~I~el--a~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S 354 (466)
.|+++|++++++ +++++|++.+++||||.+.|+++|.++ ||++|+++|+|++++.+.. .+..++|+|+++.|
T Consensus 119 ~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s 198 (401)
T PLN02409 119 QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTG 198 (401)
T ss_pred CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEc
Confidence 478999999975 258999999999999999999999999 9999999999999875433 34446789999999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHH
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRN 382 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~ 382 (466)
.+|+++++. ..|+++.++++++++..
T Consensus 199 ~~K~l~~P~--G~G~l~~~~~~~~~~~~ 224 (401)
T PLN02409 199 SQKALSLPT--GLGIVCASPKALEASKT 224 (401)
T ss_pred CccccCcCC--CcceeEECHHHHHHHhc
Confidence 999998865 36899999988887653
No 186
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.80 E-value=4.9e-18 Score=177.70 Aligned_cols=214 Identities=20% Similarity=0.186 Sum_probs=151.1
Q ss_pred chhHHHHHH----HHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHh-hcccCCcEEEEeC-
Q 012321 209 NPTTVVVEE----KMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVID- 281 (466)
Q Consensus 209 ~p~~~~Lee----~lA~l~g~e~~-v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~-~l~~~gi~v~~vd- 281 (466)
.+..+.+++ .+++++|.+.. ++++||++|+..++.+++++||+|+++.++|++....... .+...|.++..++
T Consensus 66 ~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (416)
T PRK00011 66 CEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGV 145 (416)
T ss_pred chHHHHHHHHHHHHHHHHhCCCceeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCc
Confidence 445666665 88999998655 6668999999999999999999999999999764321111 1223345555543
Q ss_pred -----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----cchhccCCcEE
Q 012321 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLV 351 (466)
Q Consensus 282 -----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-----~~pl~~gaDiv 351 (466)
..|++++++++++.++++|+++.++ +|...|+++|.++|+++|+++|+|+++..+.. ..++. ++|++
T Consensus 146 ~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~--~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~ 222 (416)
T PRK00011 146 DEETGLIDYDEVEKLALEHKPKLIIAGASA--YSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVV 222 (416)
T ss_pred CcccCCcCHHHHHHHHHhcCCCEEEECCCc--CCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEE
Confidence 3579999999975458999986554 45668999999999999999999999754432 22344 68999
Q ss_pred EeccccccccccCceEEEEEeC-hHHHHHHHHHHHHh--CCCchHHHHHH--H-HHhh-HHHHHHHHHHHHHHHHHHHHH
Q 012321 352 LHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--GGALNPNAAYL--I-IRGM-KTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~--G~~ls~~~A~l--~-lrgL-~tl~~R~e~~~~na~~La~~L 424 (466)
+.|++|+++|+ .||+++++ ++++++++...... +.......+.+ + +..+ +.++.+++++.++++.+.+.|
T Consensus 223 ~~S~~K~l~g~---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L 299 (416)
T PRK00011 223 TTTTHKTLRGP---RGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEAL 299 (416)
T ss_pred EecCCcCCCCC---CceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999765 47888885 68888887654322 11112221111 1 1212 235778889999999999999
Q ss_pred HcCC
Q 012321 425 EAHP 428 (466)
Q Consensus 425 ~~~p 428 (466)
++.+
T Consensus 300 ~~~g 303 (416)
T PRK00011 300 AERG 303 (416)
T ss_pred HhCC
Confidence 8753
No 187
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.80 E-value=1e-17 Score=177.08 Aligned_cols=209 Identities=18% Similarity=0.203 Sum_probs=163.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh---------ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al---------l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
.+...+||+.+++++|.+.+++++||++|+.+++.++ +++||+||++.++|..+...+. ..|.++.+
T Consensus 62 G~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~----~~G~~pv~ 137 (438)
T PRK15407 62 GRFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPII----QNGLVPVF 137 (438)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHH----HcCCEEEE
Confidence 4678999999999999999999999999999988875 4889999999999988764442 35676666
Q ss_pred eCC------CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccch---hccCCcE
Q 012321 280 IDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---LSLGADL 350 (466)
Q Consensus 280 vd~------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~p---l~~gaDi 350 (466)
+|. .|+++++++++++ |++|++++ ++|...|+++|.++|+++|++||+|++++.+...+. ..+| |+
T Consensus 138 vdvd~~~~~id~~~le~~i~~~-tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~ 212 (438)
T PRK15407 138 VDVELPTYNIDASLLEAAVSPK-TKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DI 212 (438)
T ss_pred EecCCCcCCcCHHHHHHHcCcC-CeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-ce
Confidence 543 3799999999874 99999865 468888999999999999999999999876643332 2333 89
Q ss_pred EEeccc--cccccccCceEEEEEeCh-HHHHHHHHHHHH-------------------------------------hC--
Q 012321 351 VLHSAT--KFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-------------------------------------LG-- 388 (466)
Q Consensus 351 vv~S~s--K~lgG~gdv~gG~vvg~~-eli~~l~~~~~~-------------------------------------~G-- 388 (466)
.++|++ |.+.... ||+++.++ ++.++++.++.. .|
T Consensus 213 ~~fSf~~~k~~~~ge---GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n 289 (438)
T PRK15407 213 ATLSFYPAHHITMGE---GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYN 289 (438)
T ss_pred EEEeCCCCCCccccC---ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccc
Confidence 999985 5565432 68888765 455555443220 12
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012321 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 389 ~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~ 429 (466)
..++.+.|.+++..|+.++.++++.+++++++.+.|.+.|.
T Consensus 290 ~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 290 LKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 23667788999999999999999999999999999988764
No 188
>PRK06855 aminotransferase; Validated
Probab=99.80 E-value=1e-17 Score=176.82 Aligned_cols=214 Identities=16% Similarity=0.185 Sum_probs=136.7
Q ss_pred hHHHHHHHHHhhhCC---CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-----
Q 012321 211 TTVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID----- 281 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~---e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd----- 281 (466)
.++++.+.+.+..|. .+.|++++|+ +++..++. ++.+||.|++++|+|+... .... ...|+++..++
T Consensus 78 LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~-~~~~--~~~g~~~v~v~~~~~~ 153 (433)
T PRK06855 78 TREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHS-SAEA--AHAGYPPVTYRLDPEN 153 (433)
T ss_pred HHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHH-HHHH--HhcCCeEEEEeccccc
Confidence 344444444443342 3345555555 89988874 8899999999999999743 2111 12244433332
Q ss_pred --CCCHHHHHHhccC-CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----hh-cc---C
Q 012321 282 --PADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL-SL---G 347 (466)
Q Consensus 282 --~~D~e~Le~ai~~-~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~----pl-~~---g 347 (466)
..|+++|+++++. .+++++++++|+||||.+++ +++|+++|+++|+++|+||+|....... ++ .. +
T Consensus 154 ~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~ 233 (433)
T PRK06855 154 NWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDV 233 (433)
T ss_pred CCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcC
Confidence 2478999999863 24799999999999999997 5678888999999999999987543211 11 11 1
Q ss_pred CcEEEeccccccccccCceEEEEEeC-----h---HHHHHHHHHHHHhCCCchHHHHHHHHHhh------HHHHHHHHHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSISGS-----G---KLVTQIRNLHHVLGGALNPNAAYLIIRGM------KTLHLRVQQQ 413 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vvg~-----~---eli~~l~~~~~~~G~~ls~~~A~l~lrgL------~tl~~R~e~~ 413 (466)
..|++.|+||.++.+|. +.||++++ + ++++.+...... ..+.+.+..+.+.+.+ +.++...+.+
T Consensus 234 ~~I~~~S~SK~~~~pGl-RiG~ii~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~ 311 (433)
T PRK06855 234 PGIALKGISKELPWPGS-RCGWIEVYNADKDEVFKKYINSILNAKMI-EVCSTTLPQMAIPRIMSHPEYKNYLKERNKRY 311 (433)
T ss_pred CeEEEecCccccCCCcc-eEEEEEEeCCchhhHHHHHHHHHHHhhcc-ccCCChHHHHHHHHhhcCCcHHHHHHHHHHHH
Confidence 34899999999998884 57888862 2 223333322221 1223334434333333 2344555667
Q ss_pred HHHHHHHHHHHHcCCCc
Q 012321 414 NSTALRMAKILEAHPKV 430 (466)
Q Consensus 414 ~~na~~La~~L~~~p~V 430 (466)
.++.+.+.+.|++++.+
T Consensus 312 ~~r~~~~~~~L~~~~~~ 328 (433)
T PRK06855 312 EKRSNIAYEKLKDVPGL 328 (433)
T ss_pred HHHHHHHHHHHhcCCCe
Confidence 77888888999876543
No 189
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.80 E-value=1.2e-17 Score=174.00 Aligned_cols=211 Identities=16% Similarity=0.188 Sum_probs=146.3
Q ss_pred hhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 210 PTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g--------~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
.....+++.++++++ .++.++++++++++..++.+++.+||.|++++|+|...... ++..|+++..++
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~----~~~~g~~v~~v~ 148 (394)
T PRK06836 73 AGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFY----VDNHGGKLVVVP 148 (394)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHH----HHHcCCEEEEEe
Confidence 345566666666653 23455555556999999999999999999999999985533 345688877764
Q ss_pred C------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHh------cCCEEEEeCCCCCCCcc----c
Q 012321 282 P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK------KGAIVCIDGTFATPLNQ----K 342 (466)
Q Consensus 282 ~------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~------~gillIvD~t~a~~~~~----~ 342 (466)
. .|+++++++++++ +++|++++|+||||.+++ +++|+++|++ ||+++|+|++|...... .
T Consensus 149 ~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~ 227 (394)
T PRK06836 149 TDTDTFQPDLDALEAAITPK-TKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVP 227 (394)
T ss_pred cCCccCcCCHHHHHhhcCcC-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCC
Confidence 3 4789999999774 999999999999999987 6678888888 89999999998743221 0
Q ss_pred h-h-ccCCcEEEeccccccccccCceEEEEEeChHHHHH------HHHHHHHhC-CCchHHHHHHHHHhhHHHHHHHHHH
Q 012321 343 A-L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ------IRNLHHVLG-GALNPNAAYLIIRGMKTLHLRVQQQ 413 (466)
Q Consensus 343 p-l-~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~------l~~~~~~~G-~~ls~~~A~l~lrgL~tl~~R~e~~ 413 (466)
. . ..+..+++.|+||.++.+| .+.||+++++++.+. +.......+ ...+......+.+.++.- .+.+++
T Consensus 228 ~~~~~~~~~i~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~ 305 (394)
T PRK06836 228 YIFKYYDNSIVVYSFSKSLSLPG-ERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-VDVSIY 305 (394)
T ss_pred ChHHccCcEEEEecchhhccCcc-eeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-HHHHHH
Confidence 1 1 1234699999999999777 467999988765432 111122222 233444444444444331 234556
Q ss_pred HHHHHHHHHHHHcC
Q 012321 414 NSTALRMAKILEAH 427 (466)
Q Consensus 414 ~~na~~La~~L~~~ 427 (466)
.++...+.+.|+++
T Consensus 306 ~~~r~~l~~~L~~~ 319 (394)
T PRK06836 306 KRNRDLLYDGLTEL 319 (394)
T ss_pred HHHHHHHHHHHHhC
Confidence 67788888888876
No 190
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.80 E-value=8.1e-18 Score=174.89 Aligned_cols=214 Identities=22% Similarity=0.236 Sum_probs=148.7
Q ss_pred CchhHHHHH----HHHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHH-hhcccCCcEEEEe-
Q 012321 208 GNPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-TVLPKMGITATVI- 280 (466)
Q Consensus 208 ~~p~~~~Le----e~lA~l~g~e~~-v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~-~~l~~~gi~v~~v- 280 (466)
+.+....++ +.+++++|.+.. ++++||++|+..++.+++++||+|+++++.|++...... ..+...|.++..+
T Consensus 59 ~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 138 (402)
T cd00378 59 GCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVP 138 (402)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEec
Confidence 344444444 457788998654 555789999999999999999999999999987532211 1134456544333
Q ss_pred -C------CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----cchhccCC
Q 012321 281 -D------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGA 348 (466)
Q Consensus 281 -d------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-----~~pl~~ga 348 (466)
+ ..|++++++++.+.++++|++++|+|| ...|+++|.++|+++|+++|+|+++..+.. ..++. ++
T Consensus 139 ~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~ 215 (402)
T cd00378 139 YGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GA 215 (402)
T ss_pred CCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CC
Confidence 2 238999999986445899999888775 567999999999999999999999643321 23334 68
Q ss_pred cEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHHH--hCCCchHHH-H-HH-HHHhhH-HHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV--LGGALNPNA-A-YL-IIRGMK-TLHLRVQQQNSTALRMA 421 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~~--~G~~ls~~~-A-~l-~lrgL~-tl~~R~e~~~~na~~La 421 (466)
|+++.|+||+++|+ .+|++++++ +++++++..... .+....+.. + .. +...++ ....+++++.++++.+.
T Consensus 216 dv~~~s~sK~l~G~---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 292 (402)
T cd00378 216 DVVTTTTHKTLRGP---RGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALA 292 (402)
T ss_pred cEEEeccccCCCCC---CceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999665 378888876 888888765432 121111111 1 11 122222 45667788899999999
Q ss_pred HHHHcC
Q 012321 422 KILEAH 427 (466)
Q Consensus 422 ~~L~~~ 427 (466)
+.|+++
T Consensus 293 ~~L~~~ 298 (402)
T cd00378 293 EALKER 298 (402)
T ss_pred HHHHhC
Confidence 999886
No 191
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.79 E-value=1.5e-17 Score=172.48 Aligned_cols=219 Identities=20% Similarity=0.216 Sum_probs=154.3
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHhccC--CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--
Q 012321 210 PTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e--~~v~~~SG~-aAi~~al~all~p--GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-- 282 (466)
+..+++++++++++|.+ +.+++++|+ ++...++.+++.+ ||+|+++++.|+.+...+....+..|+++..++.
T Consensus 64 ~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~ 143 (398)
T cd00613 64 QALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE 143 (398)
T ss_pred HHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC
Confidence 46789999999999975 666777676 4545555556666 9999999999999876665444455677777653
Q ss_pred ---CCHHHHHHhccCCCceEEEEeCCCCCCcccccH-HHHHHHHHhcCCEEEEeCCCCCC-CccchhccCCcEEEecccc
Q 012321 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV-KLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 357 (466)
Q Consensus 283 ---~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl-~~I~ela~~~gillIvD~t~a~~-~~~~pl~~gaDivv~S~sK 357 (466)
.|+++++++++++ |++|++++|+ ++|.+.|+ ++|.++|+++|+++|+|+++..+ ...++..+++|+++.|++|
T Consensus 144 ~~~~d~~~l~~~i~~~-t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K 221 (398)
T cd00613 144 GGTVDLEALKEEVSEE-VAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQK 221 (398)
T ss_pred CCCcCHHHHHHhcCCC-eEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccc
Confidence 3689999999875 9999999985 89999985 99999999999999999987543 3345556789999999999
Q ss_pred ccccc--cCceEEEEEeChHHHHHHHHH-------------------------HHHhC------CC-chHHHHHHHHH--
Q 012321 358 FIGGH--NDVLAGSISGSGKLVTQIRNL-------------------------HHVLG------GA-LNPNAAYLIIR-- 401 (466)
Q Consensus 358 ~lgG~--gdv~gG~vvg~~eli~~l~~~-------------------------~~~~G------~~-ls~~~A~l~lr-- 401 (466)
++.+. |.-++|+++.++++++.+... +...+ .. +....++..+.
T Consensus 222 ~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~ 301 (398)
T cd00613 222 TGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYL 301 (398)
T ss_pred cCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHh
Confidence 98321 112478999988877654110 00001 00 11122332222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012321 402 GMKTLHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 402 gL~tl~~R~e~~~~na~~La~~L~~~p~V 430 (466)
+...+....+++.++++++.+.|++.+..
T Consensus 302 ~~~g~~~~~~~~~~~~~~l~~~L~~~~~~ 330 (398)
T cd00613 302 GPEGLKEIAERAHLNANYLAKRLKEVGGV 330 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 22334555677888899999999887643
No 192
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.79 E-value=1.3e-17 Score=177.47 Aligned_cols=221 Identities=17% Similarity=0.213 Sum_probs=159.0
Q ss_pred chhHHHHHHHHHhhhCC---CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC---
Q 012321 209 NPTTVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~---e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd--- 281 (466)
.+.++.+.+.+....|. ++.|++|+|+ +|+.+++..+++|||.|++.+|+|.+....+ +..|+++..++
T Consensus 135 ~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~----~~~g~~~~~vp~d~ 210 (459)
T COG1167 135 PELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQAL----EALGARVIPVPVDE 210 (459)
T ss_pred HHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHH----HHcCCcEEecCCCC
Confidence 34455666666544453 4567777777 9999999999999999999999999977554 44566665553
Q ss_pred -CCCHHHHHHhccCCCceEEEEeCCC--CCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCcc-------chh-ccC
Q 012321 282 -PADMEGLEAALNNNNVSLFFTESPT--NPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-------KAL-SLG 347 (466)
Q Consensus 282 -~~D~e~Le~ai~~~~tklV~lesPs--NPtG~v~dl---~~I~ela~~~gillIvD~t~a~~~~~-------~pl-~~g 347 (466)
..|+|+|++.+++.++|++|+ +|+ ||||.++++ ++|.++|++|++++|.|+.|+..... ..+ ..+
T Consensus 211 ~G~~~e~le~~~~~~~~k~~y~-~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~ 289 (459)
T COG1167 211 DGIDPEALEEALAQWKPKAVYV-TPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPG 289 (459)
T ss_pred CCCCHHHHHHHHhhcCCcEEEE-CCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCC
Confidence 558999999998767899998 664 999999986 57999999999999999998653221 111 224
Q ss_pred CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHH----Hh-h-HHHHHHHHHHHHHHHHHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII----RG-M-KTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~l----rg-L-~tl~~R~e~~~~na~~La 421 (466)
.-|++.||||.+... ++.||+++++++++++...+.......+.+....+. .| . +.+....+.+.+..+.+.
T Consensus 290 rViy~gSFSK~l~Pg--lRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~ 367 (459)
T COG1167 290 RVIYLGSFSKTLAPG--LRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALL 367 (459)
T ss_pred CEEEEeeehhhcccc--cceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 569999999999866 478999999999999988887776665555422221 32 2 223333344566777788
Q ss_pred HHHHcCC-CcEEEeCC
Q 012321 422 KILEAHP-KVKRVHYP 436 (466)
Q Consensus 422 ~~L~~~p-~V~~V~~P 436 (466)
+.|+++. ....+..|
T Consensus 368 ~~L~~~~~~~~~~~~p 383 (459)
T COG1167 368 EALAEYLPELATWTRP 383 (459)
T ss_pred HHHHHhCCCCeeeecC
Confidence 8888873 24344444
No 193
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.79 E-value=1.1e-17 Score=174.83 Aligned_cols=213 Identities=13% Similarity=0.156 Sum_probs=136.6
Q ss_pred chhHHHHHHHHHhhh----C--C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE----
Q 012321 209 NPTTVVVEEKMSALE----G--A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT---- 276 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~----g--~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~---- 276 (466)
.+....|++++++++ | . ++.|++++|+ +++..+ ..++.+||+|++++|+|......+. ..|.+
T Consensus 75 ~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~~~~----~~g~~~~~~ 149 (409)
T PRK07590 75 EQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVDTNV----MAGRTGEAN 149 (409)
T ss_pred CCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHHH----HcCCccccc
Confidence 344556777777654 3 2 4567777776 788765 4667899999999999998664443 33443
Q ss_pred -------EEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----c
Q 012321 277 -------ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K 342 (466)
Q Consensus 277 -------v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~ 342 (466)
+..++...-+.+...+...++|+|++++|+||||.+++ +++|+++|+++|+++|+||+|...... .
T Consensus 150 ~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~ 229 (409)
T PRK07590 150 EDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPH 229 (409)
T ss_pred ccccccceeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCc
Confidence 44444321111222222235899999999999999986 567888899999999999998753221 1
Q ss_pred hh-cc-C---CcEEEeccccccccccCceEEEEEeChHHHHHH------------HHHHHHhCCCchHHHHHHH---HH-
Q 012321 343 AL-SL-G---ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI------------RNLHHVLGGALNPNAAYLI---IR- 401 (466)
Q Consensus 343 pl-~~-g---aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l------------~~~~~~~G~~ls~~~A~l~---lr- 401 (466)
++ .. + .-|++.|+||.++.+| .+.||+++++++++++ ...........+......+ +.
T Consensus 230 ~~~~~~~~~~~vi~~~SfSK~~~~pG-lRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 308 (409)
T PRK07590 230 SIYEIEGARECAIEFRSFSKTAGFTG-TRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSP 308 (409)
T ss_pred chhhCCCcccceEEEecCccccCCcC-ceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcC
Confidence 11 11 1 2477899999998777 4689999999888732 1111111122333333322 21
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 402 -GMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 402 -gL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
+.+.+....+...++++.+.+.|+++
T Consensus 309 ~~~~~~~~~~~~~~~~r~~l~~~L~~~ 335 (409)
T PRK07590 309 EGKAQIKELIDYYMENAKIIREGLESA 335 (409)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 23345555666778888899999886
No 194
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.79 E-value=1.2e-17 Score=179.25 Aligned_cols=211 Identities=13% Similarity=0.213 Sum_probs=136.9
Q ss_pred hHHHHHHHHHhhhC----C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--
Q 012321 211 TTVVVEEKMSALEG----A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~g----~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-- 282 (466)
.++++.+.+.+..| . ++.|++++|+ +|+..++.+++.|||.|++++|.|++....+. ...|+++..++.
T Consensus 99 LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~---~~~G~~vv~v~~~~ 175 (496)
T PLN02376 99 FRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLR---WRTGVEIIPVPCSS 175 (496)
T ss_pred HHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHH---hhCCCEEEEEeCCC
Confidence 34444444444434 2 3456666665 99999999999999999999999998654332 135777666643
Q ss_pred -----CCHHHHHHhcc-----CCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----h-h
Q 012321 283 -----ADMEGLEAALN-----NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-L 344 (466)
Q Consensus 283 -----~D~e~Le~ai~-----~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~----p-l 344 (466)
.|++++++++. ..++|+|++++|+||||.+++ +++|+++|++++++||+||+|+...+.. + .
T Consensus 176 ~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~ 255 (496)
T PLN02376 176 SDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVA 255 (496)
T ss_pred CccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHH
Confidence 35777765532 125899999999999999997 5678888999999999999987543211 1 1
Q ss_pred cc---------CCc--EEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---HHH--
Q 012321 345 SL---------GAD--LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLH-- 407 (466)
Q Consensus 345 ~~---------gaD--ivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~---tl~-- 407 (466)
.. ..+ +++.|+||.|+.+| .+.|++++. +.+.+.++... .++ ..+...++++...++ .++
T Consensus 256 ~l~~~~~~~~~~~~~v~vv~S~SK~~glpG-lRvG~li~~~~~l~~~~~~~~-~~~-~vs~~~Q~a~~~~L~d~~~~~~~ 332 (496)
T PLN02376 256 EVVNDVDISEVNVDLIHIVYSLSKDMGLPG-FRVGIVYSFNDSVVSCARKMS-SFG-LVSSQTQLMLASMLSDDQFVDNF 332 (496)
T ss_pred HhhccccccccCCCeEEEEEeccccCCCCc-ceEEEEEECCHHHHHHHHHHh-hcC-CCCHHHHHHHHHHhCChhHHHHH
Confidence 11 112 45799999998887 457898884 55555554433 233 234444443333222 112
Q ss_pred --HHHHHHHHHHHHHHHHHHcC
Q 012321 408 --LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 408 --~R~e~~~~na~~La~~L~~~ 427 (466)
...++..++.+.+.+.|+++
T Consensus 333 l~~~r~~l~~r~~~l~~~L~~~ 354 (496)
T PLN02376 333 LMESSRRLGIRHKVFTTGIKKA 354 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC
Confidence 22344556667777888764
No 195
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.79 E-value=2.2e-17 Score=171.95 Aligned_cols=217 Identities=18% Similarity=0.213 Sum_probs=160.2
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc---------CC-CEEEEcCCCccchH-HHHHhh------
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKTR-IFIETV------ 269 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~---------pG-D~VLv~~~~y~~t~-~~~~~~------ 269 (466)
...+...+|+++|+++.+.+.+++++||++|+..++..+.. +| ++||+....|.+.. ..+...
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~ 159 (401)
T PRK00854 80 FRNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDAR 159 (401)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcccc
Confidence 44678899999999999989999999999999999987743 23 67888877776643 222100
Q ss_pred --cccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCccc-
Q 012321 270 --LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQK- 342 (466)
Q Consensus 270 --l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~~~~- 342 (466)
+......+..++..|+++|++.+.+ ++++|++|+|+||+|.+.+ +++|.++|++||+++|+||++. ++...
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~le~~i~~-~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g 237 (401)
T PRK00854 160 GGFGPFTPGFRVVPFGDAEALEAAITP-NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTG 237 (401)
T ss_pred ccCCCCCCCeEEeCCCCHHHHHHHhCC-CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCc
Confidence 1122234566777899999999987 4999999999999999986 9999999999999999999986 22221
Q ss_pred ------hhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHH--HHHHHH
Q 012321 343 ------ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQN 414 (466)
Q Consensus 343 ------pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~~--R~e~~~ 414 (466)
......|+++. +|++++.. ..+|++++++++++.++..........++..++.++..|+.+.. ..++.+
T Consensus 238 ~~~~~~~~g~~~D~~~~--~K~l~gg~-~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~ 314 (401)
T PRK00854 238 KLLAEEHEGIEADVTLI--GKALSGGF-YPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAA 314 (401)
T ss_pred hHhHHhhcCCCCCEEEe--cccccCCc-cCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 12234688875 59998754 34789999999888775332221223477777777777777654 556677
Q ss_pred HHHHHHHHHHHcCC
Q 012321 415 STALRMAKILEAHP 428 (466)
Q Consensus 415 ~na~~La~~L~~~p 428 (466)
++.+.+.+.|++..
T Consensus 315 ~~~~~l~~~L~~~~ 328 (401)
T PRK00854 315 EMGAYFLEGLRSIR 328 (401)
T ss_pred HHHHHHHHHHHhhc
Confidence 77888888887753
No 196
>PRK14012 cysteine desulfurase; Provisional
Probab=99.79 E-value=6.2e-18 Score=176.48 Aligned_cols=216 Identities=18% Similarity=0.232 Sum_probs=151.7
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all----~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
+..+++|+.+++++|.+ +.+++++|++++.+++.++. ++||+|++++..|++....+.. ++..|+++.+++.
T Consensus 49 ~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~-~~~~g~~~~~v~~~ 127 (404)
T PRK14012 49 EAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQ-LEREGFEVTYLDPQ 127 (404)
T ss_pred HHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHH-HHhCCCEEEEEccC
Confidence 56788899999999974 46677777799988887663 7899999999999886554433 3446888877753
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEecccc
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK 357 (466)
.|+++|+++++++ +++|++++++||||.+.|+++|.++||++|+++++|++++.+.. .+....++|+++.|++|
T Consensus 128 ~~g~~d~~~l~~~i~~~-t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K 206 (404)
T PRK14012 128 SNGIIDLEKLEAAMRDD-TILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHK 206 (404)
T ss_pred CCCcCCHHHHHHhcCCC-CEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhh
Confidence 3899999999875 99999999999999999999999999999999999999876543 23445689999999999
Q ss_pred ccccccCceEEEEEeChHHHHHHHHHHH--------HhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHH
Q 012321 358 FIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~~eli~~l~~~~~--------~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~~La~~L~ 425 (466)
.+++++ .|++++.++.. .++..... ..| +.+....+.+-..+ ..+..+.+++.+.++++.+.|+
T Consensus 207 ~~gp~g--~G~l~~~~~~~-~~~~~~~~g~~~~~~~~~g-t~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~ 282 (404)
T PRK14012 207 IYGPKG--IGALYVRRKPR-VRLEAQMHGGGHERGMRSG-TLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIK 282 (404)
T ss_pred ccCCCc--eEEEEEecCCC-CCCCceecCCCccCCccCC-CcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 876544 34444444322 22211100 011 11111111111111 1233455667778888888888
Q ss_pred cCCCcE
Q 012321 426 AHPKVK 431 (466)
Q Consensus 426 ~~p~V~ 431 (466)
++|.+.
T Consensus 283 ~~~~i~ 288 (404)
T PRK14012 283 DIEEVY 288 (404)
T ss_pred cCCCEE
Confidence 887664
No 197
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.79 E-value=6.6e-18 Score=176.26 Aligned_cols=218 Identities=17% Similarity=0.231 Sum_probs=153.0
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all----~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
....+.+++.+++++|.+ +.+++++|++++.+++.++. ++||+|+++.+.|+.....+. .++..|+++..++.
T Consensus 46 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~-~~~~~g~~v~~v~~ 124 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCR-YLEREGFEVTYLPP 124 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHH-HHHhcCCEEEEEcc
Confidence 456788899999999973 45555566689888876653 689999999999988665543 34456888887753
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEeccc
Q 012321 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (466)
Q Consensus 283 -----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~s 356 (466)
.|+++++++++++ +++|++++++||||.+.|+++|.++|+++|+++++|++++.+.. .+....++|+++.|++
T Consensus 125 ~~~~~~d~~~l~~~l~~~-~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~ 203 (402)
T TIGR02006 125 KSNGLIDLEELKAAIRDD-TILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGH 203 (402)
T ss_pred CCCCcCCHHHHHHhcCCC-CEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehh
Confidence 4799999999875 99999999999999999999999999999999999999877643 2344578999999999
Q ss_pred cccccccCceEEEEEeChHHHHHHHHHHH-------HhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHH
Q 012321 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 357 K~lgG~gdv~gG~vvg~~eli~~l~~~~~-------~~G~~ls~~~A~l~lrgL~----tl~~R~e~~~~na~~La~~L~ 425 (466)
|+++++| .|+++.+++...++..... ...++.+......+...++ .++.+.+++.+.++.+.+.|+
T Consensus 204 K~~gp~G---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~ 280 (402)
T TIGR02006 204 KIYGPKG---IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIK 280 (402)
T ss_pred hhcCCCc---eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Confidence 9887555 4555554433222221110 0111222211111112222 334445566777888888888
Q ss_pred cCCCcE
Q 012321 426 AHPKVK 431 (466)
Q Consensus 426 ~~p~V~ 431 (466)
+.|.+.
T Consensus 281 ~~~~v~ 286 (402)
T TIGR02006 281 SIEEVY 286 (402)
T ss_pred cCCCEE
Confidence 888764
No 198
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.79 E-value=1.6e-17 Score=176.51 Aligned_cols=215 Identities=22% Similarity=0.225 Sum_probs=153.3
Q ss_pred ccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 203 ~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
.|+ +.+...+|+++++++++.+.++++.+|++|+.+++.++++||| |+++++.|..+...+. ..|.++..++.
T Consensus 73 ~Y~--~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~----~~G~~~v~v~~ 145 (460)
T PRK13238 73 AYA--GSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIE----LNGATAVDLVI 145 (460)
T ss_pred ccC--CCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHH----HcCCEEEEEec
Confidence 455 4567899999999999999999999999999999999999999 9999998877654332 34555444321
Q ss_pred ---------------CCHHHHHHhccC---CCceEEEEeCCCCCCc-cccc---HHHHHHHHHhcCCEEEEeCCCCC---
Q 012321 283 ---------------ADMEGLEAALNN---NNVSLFFTESPTNPFL-RCVD---VKLVSDLCHKKGAIVCIDGTFAT--- 337 (466)
Q Consensus 283 ---------------~D~e~Le~ai~~---~~tklV~lesPsNPtG-~v~d---l~~I~ela~~~gillIvD~t~a~--- 337 (466)
.|+++|++.+++ .+|++|++++|+||+| .+++ +++|.++|++||++||+|+++..
T Consensus 146 ~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a 225 (460)
T PRK13238 146 DEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENA 225 (460)
T ss_pred cccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhh
Confidence 578999999974 2499999999999997 7765 67999999999999999997522
Q ss_pred --------CCccchh-------ccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHH-----hCCCchHHHH
Q 012321 338 --------PLNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHV-----LGGALNPNAA 396 (466)
Q Consensus 338 --------~~~~~pl-------~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~-----~G~~ls~~~A 396 (466)
++....+ ....|+++.|..|.+.++ .||+++++ ++++++++..... .-+.++....
T Consensus 226 ~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~ 302 (460)
T PRK13238 226 YFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDM 302 (460)
T ss_pred hhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHH
Confidence 1111111 124799999999987665 37999887 5888888766421 1122233323
Q ss_pred HHHHHhhHH--HHHHHHHHHHHHHHHHHHHHcC
Q 012321 397 YLIIRGMKT--LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 397 ~l~lrgL~t--l~~R~e~~~~na~~La~~L~~~ 427 (466)
..+..+++. -...++...++++.|++.|++.
T Consensus 303 ~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~ 335 (460)
T PRK13238 303 EALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA 335 (460)
T ss_pred HHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC
Confidence 333333433 1233444555688999999875
No 199
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.79 E-value=2.2e-17 Score=170.72 Aligned_cols=212 Identities=23% Similarity=0.255 Sum_probs=171.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~ 287 (466)
..+...+||++||+++|.|.+++++||-.|+..++.++++++|.|+.....|.+...- .+..+.++..+...|++.
T Consensus 82 ~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG----~rls~a~~~~f~HnD~~~ 157 (388)
T COG0156 82 TSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDG----IRLSRAEVRRFKHNDLDH 157 (388)
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHH----HHhCCCcEEEecCCCHHH
Confidence 4688999999999999999999999999999999999999999999998888874433 334566777788899999
Q ss_pred HHHhccCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccch---------hc-cCCcEEE
Q 012321 288 LEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---------LS-LGADLVL 352 (466)
Q Consensus 288 Le~ai~~~-----~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~p---------l~-~gaDivv 352 (466)
||+.+++. +.++|++|..-+..|.+.|+++|++++++||++|+|||+++.++...- +. ...||++
T Consensus 158 Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~ 237 (388)
T COG0156 158 LEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIV 237 (388)
T ss_pred HHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEE
Confidence 99999662 158999999999999999999999999999999999999988765321 11 2248999
Q ss_pred eccccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLII---RGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~l---rgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+++|.||.. ||++.++..+++.++...+ .+...++|..+..++ +-++....|.++..++...+.+.++..
T Consensus 238 gTlsKAlGs~----Gg~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~ 313 (388)
T COG0156 238 GTLGKALGSS----GGYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL 313 (388)
T ss_pred EEchhhhccc----CceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999964 6999999999999886533 456778887654444 445555577888888888877655553
No 200
>PRK08354 putative aminotransferase; Provisional
Probab=99.79 E-value=1.4e-17 Score=168.11 Aligned_cols=204 Identities=19% Similarity=0.208 Sum_probs=138.6
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHH
Q 012321 212 TVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEA 290 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ 290 (466)
...|++++++++|. + +++++|+ +++..++. ++.+||+|++++|+|+.... .++..|+++..+ ..|++.+++
T Consensus 42 ~~~l~~~ia~~~~~-~-I~vt~G~~~al~~~~~-~~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~~-~~d~~~l~~ 113 (311)
T PRK08354 42 YEWLEEEFSKLFGE-P-IVITAGITEALYLIGI-LALRDRKVIIPRHTYGEYER----VARFFAARIIKG-PNDPEKLEE 113 (311)
T ss_pred hHHHHHHHHHHHCC-C-EEECCCHHHHHHHHHH-hhCCCCeEEEeCCCcHHHHH----HHHHcCCEEeec-CCCHHHHHH
Confidence 56799999999984 4 5566665 88887774 44589999999999998654 344567777655 357899998
Q ss_pred hccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-chhccCCcEEEeccccccccccCce
Q 012321 291 ALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATKFIGGHNDVL 366 (466)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-~pl~~gaDivv~S~sK~lgG~gdv~ 366 (466)
.+++ ++++++++|+||||.+.+ +++|.++|+++|+++|+||+|...... ........+++.|+||.++.+|. +
T Consensus 114 ~~~~--~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~Gl-R 190 (311)
T PRK08354 114 LVER--NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPGI-R 190 (311)
T ss_pred hhcC--CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCccc-e
Confidence 8863 678999999999999986 566777788999999999998765432 11123345899999999998874 5
Q ss_pred EEEEEeChHHHHHHHHHHHHhCCCchHHH-HHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012321 367 AGSISGSGKLVTQIRNLHHVLGGALNPNA-AYLIIRG-MKTLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 367 gG~vvg~~eli~~l~~~~~~~G~~ls~~~-A~l~lrg-L~tl~~R~e~~~~na~~La~~L~~~p~ 429 (466)
.||+++ +.+.++..+..+..+..... +..++++ .+.+..+++...+..+.+.+.|...|.
T Consensus 191 iG~~v~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 252 (311)
T PRK08354 191 VGYVKG---FEEAFRSVRMPWSIGSTGYAFLEFLIEDDFEHLRKTMPLIWREKERFEKALYVKSD 252 (311)
T ss_pred eeeeee---hHHHHHHcCCCccCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 788888 55556554433322221111 1111222 334444455555556666666654443
No 201
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.78 E-value=1.4e-17 Score=173.94 Aligned_cols=212 Identities=17% Similarity=0.147 Sum_probs=139.1
Q ss_pred HHHHHHHHHhhhC-------CCcEEE---eCCHHHHHHHHHH---HhccCCCEEEEcCCCccchHHHHHhhcccCCcEEE
Q 012321 212 TVVVEEKMSALEG-------AESTVI---MASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 212 ~~~Lee~lA~l~g-------~e~~v~---~~SG~aAi~~al~---all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~ 278 (466)
..+|++.+++++. .++.++ +.+|+.|+..++. +++++||+|++++|+|+..... ++..|.++.
T Consensus 74 ~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~----~~~~G~~~~ 149 (404)
T PTZ00376 74 LQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNI----FKSAGLNVK 149 (404)
T ss_pred CHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCcee
Confidence 4566666666531 123344 4444477766654 6789999999999999986543 445566665
Q ss_pred EeCC-------CCHHHHHHhccC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----
Q 012321 279 VIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---- 342 (466)
Q Consensus 279 ~vd~-------~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~---- 342 (466)
.++. .|++.+++++++ .+++++++++|+||||.+++ +++|+++|++||+++|+|++|.......
T Consensus 150 ~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~ 229 (404)
T PTZ00376 150 EYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKD 229 (404)
T ss_pred eccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHH
Confidence 5543 278889888852 23678888999999999986 5678888999999999999987544321
Q ss_pred --hh---c-cC-CcEEEeccccccccccCceEEEE---EeChHHHHHHH----HHHHHhCCCchHHHHHHHHHhhH----
Q 012321 343 --AL---S-LG-ADLVLHSATKFIGGHNDVLAGSI---SGSGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMK---- 404 (466)
Q Consensus 343 --pl---~-~g-aDivv~S~sK~lgG~gdv~gG~v---vg~~eli~~l~----~~~~~~G~~ls~~~A~l~lrgL~---- 404 (466)
+. . .+ .-+++.|+||.++.+|. +.||+ ++++++++++. +.......+.+.+.++.+...++
T Consensus 230 ~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl-RvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 308 (404)
T PTZ00376 230 AYAIRLFAERGVEFLVAQSFSKNMGLYGE-RIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPEL 308 (404)
T ss_pred HHHHHHHHhcCCcEEEEEeCCCccccccc-ccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHH
Confidence 11 1 11 24899999999998885 46776 57877665543 32222223334444443333222
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 405 ------TLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 405 ------tl~~R~e~~~~na~~La~~L~~~p 428 (466)
.+....+++.++++.+.+.|+++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 338 (404)
T PTZ00376 309 RAEWLSELKEMSGRIQNMRQLLYDELKALG 338 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 233334566788888999998863
No 202
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.78 E-value=8.2e-19 Score=175.85 Aligned_cols=239 Identities=23% Similarity=0.300 Sum_probs=170.7
Q ss_pred CChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHH
Q 012321 186 KKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF 265 (466)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~ 265 (466)
++.+++........+.-.|+ .++.+.+|++++++++|.+.++++.+|+.|+.++++++++|++.||+..+.|......
T Consensus 7 ~~~~m~~a~~~a~~gd~~Yg--~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ 84 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDDAYG--EDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDET 84 (290)
T ss_dssp S-HHEEHHHHHTTSB-CCTT--SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSST
T ss_pred CCHHHHHHHHccccCCcccC--CChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeecc
Confidence 45554444433333333465 6899999999999999999999999999999999999999999999988866532211
Q ss_pred HHhhcccCCcEEEEeCC-----CCHHHHHHhccC-----CCceEEEEeCCCCCC-cccc---cHHHHHHHHHhcCCEEEE
Q 012321 266 IETVLPKMGITATVIDP-----ADMEGLEAALNN-----NNVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 266 ~~~~l~~~gi~v~~vd~-----~D~e~Le~ai~~-----~~tklV~lesPsNPt-G~v~---dl~~I~ela~~~gillIv 331 (466)
- ......|.++..+.. .|+++|++.+.. .++++|++|+|+|.. |.++ ++++|.++||++|+.|++
T Consensus 85 g-a~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhm 163 (290)
T PF01212_consen 85 G-AIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHM 163 (290)
T ss_dssp T-HHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEE
T ss_pred c-hhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEE
Confidence 0 001124666665532 479999998865 348999999999874 7776 477889999999999999
Q ss_pred eCCCC---C---CCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchH---HHH---H--
Q 012321 332 DGTFA---T---PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP---NAA---Y-- 397 (466)
Q Consensus 332 D~t~a---~---~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~---~~A---~-- 397 (466)
|.+-. . ......+..++|++..|++|.++.+. |++++++++++++.+.+++.+|+.+.. ..+ |
T Consensus 164 DGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~ 240 (290)
T PF01212_consen 164 DGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPG---GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQF 240 (290)
T ss_dssp EETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSS---EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHH
T ss_pred ehhhHHHhhhcccccHHHHhhhCCEEEEEEEccccccc---ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhH
Confidence 99931 1 11123344689999999999999875 899999999988877777777765432 222 1
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012321 398 LIIRGMKTLHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 398 l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V 430 (466)
..++.++....++.+..+++++|++.|+..+.+
T Consensus 241 ~~l~~l~~~~~~~~~~~~~A~~La~~l~~~~~~ 273 (290)
T PF01212_consen 241 AALRALELWLERARHANAMAKRLAAGLEALGGV 273 (290)
T ss_dssp HHHCHEECSHHHHHCHHHHHHCHHHCHHEECEE
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 233344444567778889999999999998765
No 203
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.78 E-value=9.2e-18 Score=173.28 Aligned_cols=217 Identities=18% Similarity=0.194 Sum_probs=150.7
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc---cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all---~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
....+++++.+++++|.+ +.+++++|++++.+++.+++ ++||+|++....|++....+. .++..|+++..++.
T Consensus 41 ~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~-~~~~~G~~v~~v~~~ 119 (379)
T TIGR03402 41 GKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQ-HLEKQGYKVTYLPVD 119 (379)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHH-HHHHcCCEEEEEccC
Confidence 345678889999999973 45666677799998887764 467899999999987655443 34457888887753
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEecccc
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK 357 (466)
.|+++++++++++ +++|++++++||||.+.|+++|.++|+++|+++++|++++.+.. .+..++++|+++.|.+|
T Consensus 120 ~~g~~~~~~l~~~i~~~-~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K 198 (379)
T TIGR03402 120 EEGRLDLEELRAAITDD-TALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHK 198 (379)
T ss_pred CCCcCCHHHHHHhcCCC-cEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHH
Confidence 4799999999874 99999999999999999999999999999999999999876533 33445789999999999
Q ss_pred ccccccCceEEEEEeChHHHHHHHHHH-------HHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHHc
Q 012321 358 FIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~~eli~~l~~~~-------~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~~La~~L~~ 426 (466)
+++++| .|+++.+++.. +.... ....++.+....+.+...+ +.++...+++.+.++.+.+.|++
T Consensus 199 ~~gp~G---~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 273 (379)
T TIGR03402 199 LHGPKG---VGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA 273 (379)
T ss_pred cCCCCc---eEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 665554 56776665431 11000 0011222222222122222 23344445566677788888875
Q ss_pred -CCCcEE
Q 012321 427 -HPKVKR 432 (466)
Q Consensus 427 -~p~V~~ 432 (466)
.|.++.
T Consensus 274 ~~~~~~~ 280 (379)
T TIGR03402 274 RIPDARL 280 (379)
T ss_pred hCCCEEE
Confidence 666543
No 204
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.78 E-value=3.4e-17 Score=173.63 Aligned_cols=210 Identities=16% Similarity=0.215 Sum_probs=142.1
Q ss_pred HHHHHHHHHhhh----CC-----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 212 TVVVEEKMSALE----GA-----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~-----e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
...|++.+|+++ |. ++.|++++|. +|+.+++.+++.|||.|+++.|.|++....+. ...|+++..++
T Consensus 97 ~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~---~~~g~~vv~v~ 173 (447)
T PLN02607 97 LKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRTGVKIVPIH 173 (447)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH---hcCCcEEEEEe
Confidence 345555555554 31 3456666665 89999999999999999999999998654332 13466665553
Q ss_pred C-------CCHHHHHHhccC-----CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----
Q 012321 282 P-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (466)
Q Consensus 282 ~-------~D~e~Le~ai~~-----~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----- 341 (466)
. .|++++++++++ .++|+|++++|+||||.+++ +++|.++|+++++++|+||+|+...+.
T Consensus 174 ~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~ 253 (447)
T PLN02607 174 CDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFV 253 (447)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcc
Confidence 2 478889888763 25899999999999999997 678888999999999999998753321
Q ss_pred chhc----c------CCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH------
Q 012321 342 KALS----L------GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------ 404 (466)
Q Consensus 342 ~pl~----~------gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~------ 404 (466)
..+. . ..-+++.|+||.|+.+| .+.|++++ ++++++.++..... + ..+.....++...|+
T Consensus 254 S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~G-lRvG~ivs~n~~l~~~~~~~~~~-~-~~s~~~q~~~~~~L~d~~~~~ 330 (447)
T PLN02607 254 SVAEIVEARGYKGVAERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSSF-T-LVSSQTQHLLASMLSDEEFTE 330 (447)
T ss_pred cHHHHHhhcCCCCCcCcEEEEEcchhcCCCCc-ceEEEEEEcCHHHHHHHHHHhhc-C-CCCHHHHHHHHHHhCCchhHH
Confidence 1111 1 12378899999998887 56789887 66777776655332 2 123333332222221
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHcC
Q 012321 405 -TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 -tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+....++..++.+.+.+.|+++
T Consensus 331 ~~l~~~r~~l~~~~~~~~~~L~~~ 354 (447)
T PLN02607 331 NYIRTNRERLRKRYEMIVQGLRRA 354 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 22333445566777888888875
No 205
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.78 E-value=2e-17 Score=172.68 Aligned_cols=213 Identities=12% Similarity=0.139 Sum_probs=136.9
Q ss_pred chhHHHHHHHHHhhh---CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc--------
Q 012321 209 NPTTVVVEEKMSALE---GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI-------- 275 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~---g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi-------- 275 (466)
.+....|++++++++ +. ++.|++++|+ +++..+ ..++.+||+|++++|+|......+ +..|+
T Consensus 74 ~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~~~~~ 148 (402)
T TIGR03542 74 EQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVDSN----VMAGRAGVLDDDG 148 (402)
T ss_pred CCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHH----HHcCCcccccccc
Confidence 455678888888864 32 4556666776 788764 567789999999999999865433 33455
Q ss_pred ---EEEEeCCCCHHHHHHhcc-CCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chh
Q 012321 276 ---TATVIDPADMEGLEAALN-NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL 344 (466)
Q Consensus 276 ---~v~~vd~~D~e~Le~ai~-~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl 344 (466)
++..++..+.+.+...+. ..++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .++
T Consensus 149 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~ 228 (402)
T TIGR03542 149 RYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSI 228 (402)
T ss_pred ccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcch
Confidence 665554321111111111 124899999999999999997 778999999999999999998753321 111
Q ss_pred -cc----CCcEEEeccccccccccCceEEEEEeChHHH--------HHHHHHHHHhCCCchHHHHHHHHHh-----hHHH
Q 012321 345 -SL----GADLVLHSATKFIGGHNDVLAGSISGSGKLV--------TQIRNLHHVLGGALNPNAAYLIIRG-----MKTL 406 (466)
Q Consensus 345 -~~----gaDivv~S~sK~lgG~gdv~gG~vvg~~eli--------~~l~~~~~~~G~~ls~~~A~l~lrg-----L~tl 406 (466)
.. ...|++.|+||.++.+| ++.||++++++++ +.+...........+.....++... .+.+
T Consensus 229 ~~~~~~~~~vi~~~SfSK~~g~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~ 307 (402)
T TIGR03542 229 FEIPGAKECAIEFRSFSKTAGFTG-VRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPI 307 (402)
T ss_pred hhCCCCcccEEEEecCccccCCCC-cceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHH
Confidence 11 12477899999999887 4679999998876 2221111111222333333222222 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 012321 407 HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 407 ~~R~e~~~~na~~La~~L~~~ 427 (466)
....+...++.+.+.+.|+++
T Consensus 308 ~~~~~~~~~~~~~~~~~L~~~ 328 (402)
T TIGR03542 308 LEAISYYMENARILRKALEAA 328 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 444456677788888888875
No 206
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.78 E-value=9.6e-18 Score=151.08 Aligned_cols=156 Identities=23% Similarity=0.271 Sum_probs=127.4
Q ss_pred HHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCC-----
Q 012321 212 TVVVEEKMSALE--GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD----- 284 (466)
Q Consensus 212 ~~~Lee~lA~l~--g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D----- 284 (466)
.+++++.+++++ +.+..+++++|++|+.+++.++.++|++|++.++.|++... ..+...|.++..++..+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ 78 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCCCCccc
Confidence 468999999999 78889999999999999999998889999999999998763 23455677777765321
Q ss_pred H--HHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc----chhccCCcEEEeccccc
Q 012321 285 M--EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLGADLVLHSATKF 358 (466)
Q Consensus 285 ~--e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~----~pl~~gaDivv~S~sK~ 358 (466)
. +.+++.....++++|++++|+|++|...|+++|.++|+++|+++|+|+++..+... .+...++|+++.|++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~ 158 (170)
T cd01494 79 LDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKN 158 (170)
T ss_pred hhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcccc
Confidence 1 24544443345999999999999999999999999999999999999998765543 35566899999999999
Q ss_pred cccccCceEEEEEeC
Q 012321 359 IGGHNDVLAGSISGS 373 (466)
Q Consensus 359 lgG~gdv~gG~vvg~ 373 (466)
+++++ +|+++.+
T Consensus 159 ~~~~~---~G~l~~~ 170 (170)
T cd01494 159 LGGEG---GGVVIVK 170 (170)
T ss_pred cCCCc---eEEEEeC
Confidence 99854 7888764
No 207
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.78 E-value=6.5e-17 Score=170.34 Aligned_cols=212 Identities=18% Similarity=0.195 Sum_probs=150.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
+.+...+||+.+++++|.+.++++.+|++|+..+++++++|||.| ++++.|..+...+. ..|.+..+++.
T Consensus 51 ~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~----~~Ga~pv~v~i~~~~~ 125 (431)
T cd00617 51 GSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIE----ANGAVPVDLVIDEAHD 125 (431)
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHH----hCCCEeEEEecccccc
Confidence 556788999999999999999999999999999999999999987 57777877654332 23433333321
Q ss_pred ----------CCHHHHHHhccCC---CceEEEEeCCCCCC-ccccc---HHHHHHHHHhcCCEEEEeCCCCC--------
Q 012321 283 ----------ADMEGLEAALNNN---NVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT-------- 337 (466)
Q Consensus 283 ----------~D~e~Le~ai~~~---~tklV~lesPsNPt-G~v~d---l~~I~ela~~~gillIvD~t~a~-------- 337 (466)
.|+++|+++|+++ ++++|++++|+||+ |.+.+ +++|.++|++||++||.|++...
T Consensus 126 ~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~ 205 (431)
T cd00617 126 AQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKE 205 (431)
T ss_pred cccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhc
Confidence 5799999999853 38899999999998 88885 56789999999999999999431
Q ss_pred ---CCccchh-c------cCCcEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHHH-----hCCCchHHHHHHHHH
Q 012321 338 ---PLNQKAL-S------LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----LGGALNPNAAYLIIR 401 (466)
Q Consensus 338 ---~~~~~pl-~------~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~~-----~G~~ls~~~A~l~lr 401 (466)
++...++ + ...|.+..|++|.+..+ +||++++++ +++++++..... ..+.++......+..
T Consensus 206 r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~---~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~ 282 (431)
T cd00617 206 REEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN---IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQ 282 (431)
T ss_pred ccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc---cceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHH
Confidence 1222221 1 14788888888877765 489999986 688888754321 112233332222222
Q ss_pred hhHHH--HHHHHHHHHHHHHHHHHHHcC
Q 012321 402 GMKTL--HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 402 gL~tl--~~R~e~~~~na~~La~~L~~~ 427 (466)
+|+.. ...+++..+++++|++.|++.
T Consensus 283 gL~e~~~~~~l~~~~~~r~~l~~~L~~~ 310 (431)
T cd00617 283 GLREAVEEDYLRHRVEQVRYLGDRLDEA 310 (431)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 44331 344566666778899999976
No 208
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.78 E-value=3.1e-17 Score=168.61 Aligned_cols=215 Identities=17% Similarity=0.193 Sum_probs=155.6
Q ss_pred hhHHHHHHHHHhhhCCC---c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 210 PTTVVVEEKMSALEGAE---S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~-~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
...+++++.+++++|.+ + .+++++|+.++..++.++..+||+|++..+.|.+.. +...++..|+++..++.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~~~~~g~~~~~i~~~~~ 114 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGAR--IAQIAEYLGIAHVVLDTGED 114 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHH--HHHHHHHcCCcEEEEECCCC
Confidence 36889999999999973 3 446678899999999999999999999887776643 22445667887777643
Q ss_pred --CCHHHHHHhccCC-CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccchhccCCcEEEeccccc
Q 012321 283 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (466)
Q Consensus 283 --~D~e~Le~ai~~~-~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-~~~pl~~gaDivv~S~sK~ 358 (466)
.|+++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++++|+++..+. ..+...+++|+++.|++|+
T Consensus 115 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~ 194 (368)
T PRK13479 115 EPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKC 194 (368)
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccc
Confidence 4789999988642 36789999999999999999999999999999999998765432 2233356899999999999
Q ss_pred cccccCceEEEEEeChHHHHHHHHHHHHh--------------C---CCchHHHHH---HHHHhh-H--HHHHHHHHHHH
Q 012321 359 IGGHNDVLAGSISGSGKLVTQIRNLHHVL--------------G---GALNPNAAY---LIIRGM-K--TLHLRVQQQNS 415 (466)
Q Consensus 359 lgG~gdv~gG~vvg~~eli~~l~~~~~~~--------------G---~~ls~~~A~---l~lrgL-~--tl~~R~e~~~~ 415 (466)
+.|+.+ .|+++.++++++++......+ + .+.+....+ .++..+ + .++.+.+++.+
T Consensus 195 l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~ 272 (368)
T PRK13479 195 IEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYAN 272 (368)
T ss_pred cccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 866542 499999998887765422110 0 012211111 122222 1 24556677888
Q ss_pred HHHHHHHHHHcCC
Q 012321 416 TALRMAKILEAHP 428 (466)
Q Consensus 416 na~~La~~L~~~p 428 (466)
.++.+.+.|++++
T Consensus 273 ~~~~l~~~L~~~g 285 (368)
T PRK13479 273 NQRTLVAGMRALG 285 (368)
T ss_pred HHHHHHHHHHHcC
Confidence 8888989988863
No 209
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.77 E-value=3.2e-17 Score=171.55 Aligned_cols=210 Identities=14% Similarity=0.152 Sum_probs=136.9
Q ss_pred HHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHhcc-----CCCEEEE-cCCCccchHHHHHh--hcccCCcE
Q 012321 213 VVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVP-----AGGHIVT-TTDCYRKTRIFIET--VLPKMGIT 276 (466)
Q Consensus 213 ~~Lee~lA~l~----g~---e~~v~~~SG~-aAi~~al~all~-----pGD~VLv-~~~~y~~t~~~~~~--~l~~~gi~ 276 (466)
..|++.|++++ |. ++.|++++|+ +++.+++.+++. +||.|++ .+|+|+........ .+...+..
T Consensus 77 ~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~ 156 (416)
T PRK09440 77 DELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPN 156 (416)
T ss_pred HHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccc
Confidence 45555555544 42 4566677776 899999988885 6899999 69999985542210 11222222
Q ss_pred EEEeC------CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----c-
Q 012321 277 ATVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K- 342 (466)
Q Consensus 277 v~~vd------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~- 342 (466)
+..++ ..|+++|+ +.+ ++++|++++|+||||.+++ +++|+++|+++++++|+||+|..+... .
T Consensus 157 ~~~~~~~~~~~~~d~~~l~--~~~-~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~ 233 (416)
T PRK09440 157 IELLPEGQFKYHVDFEHLH--IDE-DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEA 233 (416)
T ss_pred cccccccccccCCCHHHcc--cCC-CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhc
Confidence 22221 24677776 344 4899999999999999997 667888899999999999999753211 1
Q ss_pred -hhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH--H----HH-HHHHHH
Q 012321 343 -ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT--L----HL-RVQQQN 414 (466)
Q Consensus 343 -pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t--l----~~-R~e~~~ 414 (466)
+...+.-|++.|+||+ +.+| .+.||+++++++++++...........+.+...++...++. + .. ..+...
T Consensus 234 ~~~~~~~vI~~~SfSK~-~~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 311 (416)
T PRK09440 234 TPLWNPNIILCMSLSKL-GLPG-VRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYR 311 (416)
T ss_pred CccccCCeEEEeccccc-CCCc-ceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 1112234889999996 6666 56899999999999998877666555555555544444322 1 11 122234
Q ss_pred HHHHHHHHHHHcC
Q 012321 415 STALRMAKILEAH 427 (466)
Q Consensus 415 ~na~~La~~L~~~ 427 (466)
++.+.+.+.|+++
T Consensus 312 ~r~~~~~~~L~~~ 324 (416)
T PRK09440 312 QKVQLAIALLRRY 324 (416)
T ss_pred HHHHHHHHHHHHh
Confidence 4555566666543
No 210
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.77 E-value=3.8e-17 Score=167.75 Aligned_cols=214 Identities=18% Similarity=0.194 Sum_probs=151.5
Q ss_pred hhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e----~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
...+.+++.+++++|++ ..++++||++++..++.+++.+||++++..+.+.+.. +...++..|+++..++.
T Consensus 35 ~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~~~v~~~~~ 112 (363)
T TIGR02326 35 IVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGAR--IVQIAEYLGIPHHVVDTGEV 112 (363)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCC
Confidence 45778899999999974 2456678889999999999889988777655554432 22445667877776643
Q ss_pred --CCHHHHHHhccCC-CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccchhccCCcEEEeccccc
Q 012321 283 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (466)
Q Consensus 283 --~D~e~Le~ai~~~-~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-~~~pl~~gaDivv~S~sK~ 358 (466)
.|+++++++++++ ++++|.+.+++||||.+.|+++|.++||++|+++++|++++.+. ..+...+++|+++.|++|+
T Consensus 113 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~ 192 (363)
T TIGR02326 113 EPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKC 192 (363)
T ss_pred CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccc
Confidence 4789999998753 36788888999999999999999999999999999999876543 2334456899999999999
Q ss_pred cccccCceEEEEEeChHHHHHHHHHH------------HH---hC---CCchHHHHHHHHHhhHH------HHHHHHHHH
Q 012321 359 IGGHNDVLAGSISGSGKLVTQIRNLH------------HV---LG---GALNPNAAYLIIRGMKT------LHLRVQQQN 414 (466)
Q Consensus 359 lgG~gdv~gG~vvg~~eli~~l~~~~------------~~---~G---~~ls~~~A~l~lrgL~t------l~~R~e~~~ 414 (466)
++|+.+ .|+++.+++.++++.... .. .+ .+.+....+.+...++. ++.+.+++.
T Consensus 193 l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~ 270 (363)
T TIGR02326 193 IQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQ 270 (363)
T ss_pred cccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 976642 489999888776643100 00 01 01222222222222222 345667788
Q ss_pred HHHHHHHHHHHcC
Q 012321 415 STALRMAKILEAH 427 (466)
Q Consensus 415 ~na~~La~~L~~~ 427 (466)
+++.++.+.|+++
T Consensus 271 ~~~~~l~~~L~~~ 283 (363)
T TIGR02326 271 QNQKTLVAGMRAL 283 (363)
T ss_pred HHHHHHHHHHHHc
Confidence 8888899988876
No 211
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.77 E-value=2.1e-17 Score=167.68 Aligned_cols=207 Identities=14% Similarity=0.115 Sum_probs=146.8
Q ss_pred CccCCCCchhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhcc------------CC--CEEEEcCCCccchH
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP------------AG--GHIVTTTDCYRKTR 263 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g~e----~~v~~~SG~aAi~~al~all~------------pG--D~VLv~~~~y~~t~ 263 (466)
|..+.......+++.+++++++|.+ +.+++++|++|+..++.++.. +| +.|+++++.|....
T Consensus 30 y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~ 109 (345)
T cd06450 30 WDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE 109 (345)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH
Confidence 3444333444555666677777864 688888888999998887743 33 47888888888754
Q ss_pred HHHHhhcccCCcEEEEeC-----CCCHHHHHHhccCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeC
Q 012321 264 IFIETVLPKMGITATVID-----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 264 ~~~~~~l~~~gi~v~~vd-----~~D~e~Le~ai~~~-----~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~ 333 (466)
... ...|+++..++ ..|+++|++++++. ++++|+++.|+||+|.+.|+++|+++|+++|+++++|+
T Consensus 110 ~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~ 185 (345)
T cd06450 110 KAA----AYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDA 185 (345)
T ss_pred HHH----HHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEec
Confidence 433 22356665554 34899999998750 38899999999999999999999999999999999999
Q ss_pred CCCCCCcc-c---h--h-ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh--hH
Q 012321 334 TFATPLNQ-K---A--L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG--MK 404 (466)
Q Consensus 334 t~a~~~~~-~---p--l-~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg--L~ 404 (466)
+|+.+... . . . ..++|++..|+||+++++. ..|+++.+ ....|.+++. ..
T Consensus 186 a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~--g~g~~~~~-------------------~~~~~~~l~~l~~~ 244 (345)
T cd06450 186 AYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL--GCSAVLVR-------------------ALKLWATLRRFGRD 244 (345)
T ss_pred hhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCc--chHHHHHH-------------------HHHHHHHHHHHhHH
Confidence 98765421 1 1 0 1268999999999987764 24555433 2223333322 24
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcEEE
Q 012321 405 TLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 405 tl~~R~e~~~~na~~La~~L~~~p~V~~V 433 (466)
.++.++++..+.++++.+.|++.+.+..+
T Consensus 245 g~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 273 (345)
T cd06450 245 GYGEHIDRIVDLAKYLAELIRADPGFELL 273 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 46677888888999999999998876443
No 212
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.77 E-value=4.7e-17 Score=165.23 Aligned_cols=214 Identities=17% Similarity=0.239 Sum_probs=152.4
Q ss_pred hhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC----
Q 012321 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID---- 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e----~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd---- 281 (466)
+..+.+++.+++++|.+ ..+++++|++++..++.+++.+||++++..+.+.+.. +...++..|.++..++
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~~~ 108 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFSEY 108 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecCCC
Confidence 67889999999999974 2446789999999999999988888776655544321 2233455677766654
Q ss_pred -CCCHHHHHHhccCC-CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccchhccCCcEEEeccccc
Q 012321 282 -PADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (466)
Q Consensus 282 -~~D~e~Le~ai~~~-~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-~~~pl~~gaDivv~S~sK~ 358 (466)
..|+++++++++++ ++++|++.+++|++|.+.|+++|.++|+++|+++|+|++++.+. ......+++|+++.|++|+
T Consensus 109 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~ 188 (355)
T TIGR03301 109 EPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKC 188 (355)
T ss_pred CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcc
Confidence 23789999998642 36788888999999999999999999999999999999876443 2333456899999999999
Q ss_pred cccccCceEEEEEeChHHHHHHHHHH---------------HH--hCCCchHHHHHHHHHhhHH------HHHHHHHHHH
Q 012321 359 IGGHNDVLAGSISGSGKLVTQIRNLH---------------HV--LGGALNPNAAYLIIRGMKT------LHLRVQQQNS 415 (466)
Q Consensus 359 lgG~gdv~gG~vvg~~eli~~l~~~~---------------~~--~G~~ls~~~A~l~lrgL~t------l~~R~e~~~~ 415 (466)
++|+.. .|++++++++++.++... .. ...+.+....+.+...++. ++.++++.++
T Consensus 189 l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 266 (355)
T TIGR03301 189 LEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRR 266 (355)
T ss_pred cccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 865542 489999999887765210 00 0112233322222222322 4556677788
Q ss_pred HHHHHHHHHHcC
Q 012321 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+++.+.+.|+++
T Consensus 267 ~~~~~~~~L~~~ 278 (355)
T TIGR03301 267 NRELLVDGLRAL 278 (355)
T ss_pred HHHHHHHHHHHc
Confidence 889999999876
No 213
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.76 E-value=8.6e-17 Score=167.47 Aligned_cols=211 Identities=14% Similarity=0.125 Sum_probs=136.5
Q ss_pred HHHHHHHHHhhh----C---CCcE--EEeCCHH-HHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 212 TVVVEEKMSALE----G---AEST--VIMASGM-SASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 212 ~~~Lee~lA~l~----g---~e~~--v~~~SG~-aAi~~al~al--l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
...|++++++++ + .++. +++|+|. +|+.+++..+ +.+||+|++++|+|+.....+ +..|+++..
T Consensus 71 ~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~----~~~g~~~v~ 146 (396)
T PRK09257 71 LAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIF----EAAGLEVKT 146 (396)
T ss_pred CHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHH----HHcCCcEEE
Confidence 445556655553 2 1333 3666665 9999988655 589999999999999866444 345666554
Q ss_pred eC-------CCCHHHHHHhccC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----c
Q 012321 280 ID-------PADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----K 342 (466)
Q Consensus 280 vd-------~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~ 342 (466)
++ ..|+++++++++. .+++++++++|+||||.+++ +++|+++|+++++++|+|++|...... .
T Consensus 147 v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~ 226 (396)
T PRK09257 147 YPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAY 226 (396)
T ss_pred EeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHH
Confidence 43 2478899888752 22567777999999999986 577888999999999999998754321 1
Q ss_pred hh---c-c-CCcEEEeccccccccccCceEEEEE--e-ChHHH----HHHHHHHHHhCCCchHHHHHHHHHhh-------
Q 012321 343 AL---S-L-GADLVLHSATKFIGGHNDVLAGSIS--G-SGKLV----TQIRNLHHVLGGALNPNAAYLIIRGM------- 403 (466)
Q Consensus 343 pl---~-~-gaDivv~S~sK~lgG~gdv~gG~vv--g-~~eli----~~l~~~~~~~G~~ls~~~A~l~lrgL------- 403 (466)
++ . . ..-|++.|+||.++.+|. +.||++ . +++.+ .+++..........+.+.+.++.+.+
T Consensus 227 ~~~~~~~~~~~vi~i~SfSK~~~~~Gl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 305 (396)
T PRK09257 227 GLRAFAAAGLELLVASSFSKNFGLYGE-RVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRA 305 (396)
T ss_pred HHHHHHhcCCcEEEEEEcCCcCccccc-cceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHH
Confidence 11 1 1 134889999999998775 567776 2 44433 33333332222223343333222221
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 404 ---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 404 ---~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
+.+....+++.++++.+.+.|+++
T Consensus 306 ~~~~~~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 306 EWEAELEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 223334556677888888888876
No 214
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.76 E-value=5.5e-17 Score=171.53 Aligned_cols=214 Identities=21% Similarity=0.270 Sum_probs=154.3
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc-cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC----C
Q 012321 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----D 284 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all-~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~----D 284 (466)
..++++.+++++|.+ +.+++++|++++..+++++. .+||+|+++++.|+.....+.......|+++..++.. |
T Consensus 114 ~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d 193 (447)
T PRK00451 114 IFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTD 193 (447)
T ss_pred HHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCC
Confidence 444557789999974 34456666688888888874 7999999999999987766655555678888877643 8
Q ss_pred HHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE--eCCCCCCCccchhccCCcEEEeccccc----
Q 012321 285 MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLHSATKF---- 358 (466)
Q Consensus 285 ~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIv--D~t~a~~~~~~pl~~gaDivv~S~sK~---- 358 (466)
+++++++++++ |++|++++| |+||.+.|+++|.++||++|+++++ |.. ..+....+.++|+|+++.|.+|+
T Consensus 194 ~~~l~~~i~~~-t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~~~~~~D~~~~s~~k~~~~~ 270 (447)
T PRK00451 194 LEALEAAVDDD-TAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKPPGEYGADIVVGEGQPLGIPL 270 (447)
T ss_pred HHHHHHhcCCC-eEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCCcccCCCCEEEECCCcCCCCC
Confidence 99999999875 999999999 8999999999999999999999998 544 23333445678999999977775
Q ss_pred -cccccCceEEEEEeChHHHHHHH----------------------------HHHHHhCCC-chH---HHHHHHHH--hh
Q 012321 359 -IGGHNDVLAGSISGSGKLVTQIR----------------------------NLHHVLGGA-LNP---NAAYLIIR--GM 403 (466)
Q Consensus 359 -lgG~gdv~gG~vvg~~eli~~l~----------------------------~~~~~~G~~-ls~---~~A~l~lr--gL 403 (466)
++|++ +|+++.++++++.+. ..+...... ..+ ..++..++ +-
T Consensus 271 ~~~Gpg---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~ 347 (447)
T PRK00451 271 SFGGPY---LGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGP 347 (447)
T ss_pred CCCCCC---chHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCH
Confidence 55553 788888888877631 111011111 111 22322222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcE
Q 012321 404 KTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 404 ~tl~~R~e~~~~na~~La~~L~~~p~V~ 431 (466)
+.++.+.+++.++++.+.+.|++++.++
T Consensus 348 ~g~~~~~~~~~~~~~~l~~~L~~~~g~~ 375 (447)
T PRK00451 348 EGLRELAEQNHQKAHYLAERLAEIGGVE 375 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 3466677888899999999999988664
No 215
>PRK07908 hypothetical protein; Provisional
Probab=99.75 E-value=6.2e-17 Score=165.57 Aligned_cols=203 Identities=16% Similarity=0.169 Sum_probs=139.6
Q ss_pred hHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----
Q 012321 211 TTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~----- 283 (466)
....|++.+++++|. ++.|++++|+ +++..++. +.+| .+++..|+|.... ..++..|+++..++..
T Consensus 59 g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~-~viv~~P~y~~~~----~~~~~~G~~i~~v~~~~~~~~ 131 (349)
T PRK07908 59 DERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR-RAAVVHPSFTEPE----AALRAAGIPVHRVVLDPPFRL 131 (349)
T ss_pred chHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-eEEEeCCCChHHH----HHHHHcCCEEEeeccCcccCc
Confidence 567899999999985 4566666665 89888776 5665 5667789987744 3345567777666432
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc--hh---ccCCcEEEeccccc
Q 012321 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--AL---SLGADLVLHSATKF 358 (466)
Q Consensus 284 D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~--pl---~~gaDivv~S~sK~ 358 (466)
|++. +++ ++++|++++|+||||.+++.++|.++|++ +.++|+|++|...+... ++ .....+++.|+||.
T Consensus 132 d~~~----l~~-~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~ 205 (349)
T PRK07908 132 DPAA----VPD-DADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKT 205 (349)
T ss_pred ChhH----hcc-CCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEeecccc
Confidence 3443 344 48999999999999999999999999964 78899999986432111 11 22234788899999
Q ss_pred cccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHH-HH--hhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 359 IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI-IR--GMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 359 lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~-lr--gL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
++.+| ++.||+++++++++.++.....+........+... +. ..+.+....++..++++.+.+.|+++
T Consensus 206 ~~l~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 276 (349)
T PRK07908 206 WSLAG-LRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV 276 (349)
T ss_pred cCCcc-ceeeeeecCHHHHHHHHhcCCCCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 98676 45899999999999887655433222222222111 11 23445555666778888888999886
No 216
>PLN02397 aspartate transaminase
Probab=99.75 E-value=1.5e-16 Score=167.52 Aligned_cols=212 Identities=16% Similarity=0.167 Sum_probs=136.5
Q ss_pred hHHHHHHHHHhhhCC-------CcE-----EEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEE
Q 012321 211 TTVVVEEKMSALEGA-------EST-----VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~-------e~~-----v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~ 278 (466)
...+|++.+++++.. ++. ++.++|..++...+..++.|||+|++++|.|+.....+ +..|.++.
T Consensus 92 G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~----~~~g~~~~ 167 (423)
T PLN02397 92 GLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIF----RDAGVPVR 167 (423)
T ss_pred CCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHH----HHcCCeEE
Confidence 345666666665421 122 23344554555666666679999999999999865433 34566655
Q ss_pred EeC-------CCCHHHHHHhccC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----
Q 012321 279 VID-------PADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---- 342 (466)
Q Consensus 279 ~vd-------~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~---- 342 (466)
.++ ..|++.+++.+.. .+++++++++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 168 ~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~ 247 (423)
T PLN02397 168 TYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDAD 247 (423)
T ss_pred EeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhh
Confidence 542 2478877777642 34889999999999999986 5678888999999999999987654311
Q ss_pred --h---hc-cC-CcEEEeccccccccccCceEEEEE---eChHHHHHHH----HHHHHhCCCchHHHHHHHHHhhH----
Q 012321 343 --A---LS-LG-ADLVLHSATKFIGGHNDVLAGSIS---GSGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMK---- 404 (466)
Q Consensus 343 --p---l~-~g-aDivv~S~sK~lgG~gdv~gG~vv---g~~eli~~l~----~~~~~~G~~ls~~~A~l~lrgL~---- 404 (466)
+ +. .+ .-|++.|+||.++.+|++ .||++ +++++++++. ........+.+...++++...|+
T Consensus 248 ~~~~~~~~~~~~~vI~~~SfSK~~~~~G~R-vG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~ 326 (423)
T PLN02397 248 AQSVRMFVEDGHEILVAQSYAKNMGLYGER-VGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPEL 326 (423)
T ss_pred hHHHHHHHhcCCcEEEEEECcccCCCcccc-ceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHH
Confidence 1 11 12 248899999999988865 57763 4566555433 33322222333444443332222
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHcC
Q 012321 405 ------TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 ------tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+....++..++++.+.+.|+++
T Consensus 327 ~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 327 FSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 13344556778888899999886
No 217
>PLN02672 methionine S-methyltransferase
Probab=99.74 E-value=2.5e-16 Score=179.30 Aligned_cols=212 Identities=16% Similarity=0.121 Sum_probs=150.7
Q ss_pred hHHHHHHHHHhhhCCC----cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 211 TTVVVEEKMSALEGAE----STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~e----~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
.++++.+++++.+|.+ +.|++++|+ +++..++.+++++||+|+++.|+|+.....+ +..|.++..++.
T Consensus 735 lr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a----~~~Ga~vv~Vpl~~e 810 (1082)
T PLN02672 735 PRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAA----KFLKANFRRIPTKSS 810 (1082)
T ss_pred HHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHH----HHcCCEEEEEecccc
Confidence 4789999999988752 367777787 7788888999999999999999999866443 345666665542
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCC-CCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc---------ch-h
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---------KA-L 344 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPs-NPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~---------~p-l 344 (466)
.|.+++++++++.+.++|++++|+ ||||.+++ +++|+++|++||++||+||+|....+. .+ .
T Consensus 811 ~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l 890 (1082)
T PLN02672 811 DGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSIL 890 (1082)
T ss_pred cCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHH
Confidence 257889999865335689999997 99999985 678888899999999999998632221 00 1
Q ss_pred -cc------CCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCCC-chHHHHHHHHHh--------hHHHH
Q 012321 345 -SL------GADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA-LNPNAAYLIIRG--------MKTLH 407 (466)
Q Consensus 345 -~~------gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~~-ls~~~A~l~lrg--------L~tl~ 407 (466)
.. ..-+++.|+||.++.+|. +.||++++ +++++.++......+.. .+.+.+..++.. .+.+.
T Consensus 891 ~~~~~~sks~nVIvL~SfSKkf~lpGL-RIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~ 969 (1082)
T PLN02672 891 SRLKSSNPSFAVALLGGLSTELLSGGH-EFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVA 969 (1082)
T ss_pred HHhccccCCceEEEEeCcHHhhccHHH-HheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 11 123788899999999885 57888886 45888887754433322 223332222211 12344
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 012321 408 LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 408 ~R~e~~~~na~~La~~L~~~ 427 (466)
...+...++++.+.+.|+++
T Consensus 970 e~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 970 EQKKILKSRAERLKETLEAC 989 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHC
Confidence 44556778889999999886
No 218
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.74 E-value=3.2e-16 Score=160.60 Aligned_cols=214 Identities=13% Similarity=0.096 Sum_probs=150.6
Q ss_pred hHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhcc----CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--
Q 012321 211 TTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all~----pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-- 282 (466)
..+++++++++++|.+ ..+++++|++++..++.++.. +||+|++.++.|.... ..++..|+++..++.
T Consensus 60 ~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~~~ 135 (371)
T PRK13520 60 LEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD----KAADMLGVELRRAPLDD 135 (371)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH----HHHHHcCceEEEecCCC
Confidence 3478999999999974 457777888998888776643 5799999999887643 334556778777653
Q ss_pred ---CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc---cc-----hhccCCcEE
Q 012321 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QK-----ALSLGADLV 351 (466)
Q Consensus 283 ---~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~---~~-----pl~~gaDiv 351 (466)
.|+++|+++++++ +++|++.+++|++|.+.|+++|.++|+++|+++++|++|+.+.. .. ....++|.+
T Consensus 136 ~~~~d~~~l~~~i~~~-~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~ 214 (371)
T PRK13520 136 DYRVDVKAVEDLIDDN-TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSI 214 (371)
T ss_pred CCcCCHHHHHHHHhhC-CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceE
Confidence 4899999999875 77777788999999999999999999999999999999875421 11 112478999
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHHHhC--------CC---chHHHHHHHHHhh--HHHHHHHHHHHHHHH
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--------GA---LNPNAAYLIIRGM--KTLHLRVQQQNSTAL 418 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G--------~~---ls~~~A~l~lrgL--~tl~~R~e~~~~na~ 418 (466)
..|.+|+..++. ..|++++.++++++.+......+. ++ .....++.++..+ +.++.+.++..++++
T Consensus 215 ~~s~~K~~~a~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~ 293 (371)
T PRK13520 215 TIDPHKMGLAPI-PAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTR 293 (371)
T ss_pred EECCccccCccC-CceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHH
Confidence 999999876443 235566667777776642211110 11 1122233333332 234557788888999
Q ss_pred HHHHHHHcCCCcE
Q 012321 419 RMAKILEAHPKVK 431 (466)
Q Consensus 419 ~La~~L~~~p~V~ 431 (466)
++.+.|++. ++.
T Consensus 294 ~l~~~L~~~-g~~ 305 (371)
T PRK13520 294 WLAEELKER-GFE 305 (371)
T ss_pred HHHHHHHhC-CCE
Confidence 999999876 443
No 219
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.74 E-value=4.7e-16 Score=164.44 Aligned_cols=209 Identities=16% Similarity=0.124 Sum_probs=154.7
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--------------cCCCEEEEcCCCccchHHHHHhhcccCCc
Q 012321 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------------PAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all--------------~pGD~VLv~~~~y~~t~~~~~~~l~~~gi 275 (466)
...++||++||+++|.+++++++||..|+..++.++. ..+|.|++....|.+...-+...-.+.+.
T Consensus 147 ~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a 226 (476)
T PLN02955 147 TYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNV 226 (476)
T ss_pred HHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCc
Confidence 5678899999999999999999999999988888772 45678888888888866554322122257
Q ss_pred EEEEeCCCCHHHHHHhccCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---------hh
Q 012321 276 TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------AL 344 (466)
Q Consensus 276 ~v~~vd~~D~e~Le~ai~~~--~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~---------pl 344 (466)
++..++..|+++|++.++.. +.++|++|...++.|.+.|+++|.++|++||++||+||+++.+.... .+
T Consensus 227 ~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~ 306 (476)
T PLN02955 227 EVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNC 306 (476)
T ss_pred eEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCC
Confidence 77778899999999888532 35799999999999999999999999999999999999987654322 11
Q ss_pred ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhH---HHHHHHHHHHHHHHH
Q 012321 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALR 419 (466)
Q Consensus 345 ~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~---tl~~R~e~~~~na~~ 419 (466)
....||++.|++|.+|.. ||++++++++++.++.... .+++.+++..+..++..++ +-+.|.++..+|.++
T Consensus 307 ~~di~ii~~TLsKA~G~~----GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~ 382 (476)
T PLN02955 307 EADVDLCVGTLSKAAGCH----GGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKE 382 (476)
T ss_pred CCCCcEEEEeCccchhcc----CceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 124689999999999865 5999999998888875443 2344445443333333332 233455666666655
Q ss_pred HHH
Q 012321 420 MAK 422 (466)
Q Consensus 420 La~ 422 (466)
+.+
T Consensus 383 fr~ 385 (476)
T PLN02955 383 FKA 385 (476)
T ss_pred HHH
Confidence 554
No 220
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.74 E-value=2.2e-16 Score=163.20 Aligned_cols=211 Identities=18% Similarity=0.134 Sum_probs=147.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~ 287 (466)
.++..+++|++||+++|.+.++++++|+.|+..++..+.++||.|++....|+++...+.. +. +..+. +...|+++
T Consensus 54 ~~~~~~~~e~~la~~~~~~~~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~-~~--~~~~~-~~~~d~~~ 129 (370)
T PRK05937 54 PSSLLDDLEHKIAHFHGAPEAFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSV-IS--GWHQS-FRHNDLDH 129 (370)
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHH-cC--CceEE-ecCCCHHH
Confidence 5678999999999999999999999999888776666667889999888889887665533 22 33343 45678999
Q ss_pred HHHhccC-----CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccch-----hccC---CcEEEec
Q 012321 288 LEAALNN-----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-----LSLG---ADLVLHS 354 (466)
Q Consensus 288 Le~ai~~-----~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~p-----l~~g---aDivv~S 354 (466)
|++.+++ .++.+|++++++|++|.+.|+++|.++|+++|+++++|++++.+..... ..++ .++++.|
T Consensus 130 l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~t 209 (370)
T PRK05937 130 LESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVT 209 (370)
T ss_pred HHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEe
Confidence 9998863 2367888999999999999999999999999999999999986533211 1223 2477899
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHHH----HHHHHHHHHHHHHHHHHHc
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTLH----LRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~tl~----~R~e~~~~na~~La~~L~~ 426 (466)
++|.+|+.| +| +++.+++.+.+..... .+....++.....+...++.+. .+.++..++.+++.+.|..
T Consensus 210 lsK~~g~~G---~~-vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~ 283 (370)
T PRK05937 210 YSKALGSMG---AA-LLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS 283 (370)
T ss_pred chhhhhcCc---eE-EEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC
Confidence 999998765 34 4566666555442211 1223344444333333444332 2334555666667666654
No 221
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.74 E-value=1.5e-16 Score=170.92 Aligned_cols=144 Identities=17% Similarity=0.286 Sum_probs=107.5
Q ss_pred EEEeCCH-HHHHHHHHHH-----hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-------CCCHHHHHHhccC
Q 012321 228 TVIMASG-MSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-------PADMEGLEAALNN 294 (466)
Q Consensus 228 ~v~~~SG-~aAi~~al~a-----ll~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd-------~~D~e~Le~ai~~ 294 (466)
.|++++| ++|+..++.+ +++|||+|++++|.|........ +...++.+..++ ..|.++|++++++
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~--l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~ 240 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE--LPRYDLEVVHINADEENEWQYPDSELEKLRDP 240 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHH--HcCCCeEEEEeecCcccCCCCCHHHHHhhcCC
Confidence 5555555 5899888876 68999999999999998654332 223345544443 2467899998877
Q ss_pred CCceEEEEeCCCCCCccccc---HHHHHHHHHh--cCCEEEEeCCCCCCCc--cchhcc--CCcEEEeccccccccccCc
Q 012321 295 NNVSLFFTESPTNPFLRCVD---VKLVSDLCHK--KGAIVCIDGTFATPLN--QKALSL--GADLVLHSATKFIGGHNDV 365 (466)
Q Consensus 295 ~~tklV~lesPsNPtG~v~d---l~~I~ela~~--~gillIvD~t~a~~~~--~~pl~~--gaDivv~S~sK~lgG~gdv 365 (466)
++|+|++++|+||||.+++ +++|+++|++ ++++||+||+|..... ...... ...|++.|+||+++.+|+.
T Consensus 241 -~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~R 319 (527)
T PRK09275 241 -SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWR 319 (527)
T ss_pred -CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhH
Confidence 4999999999999999997 6778888854 5999999999976432 111111 2459999999999999865
Q ss_pred eEEEEEeChH
Q 012321 366 LAGSISGSGK 375 (466)
Q Consensus 366 ~gG~vvg~~e 375 (466)
.||++++++
T Consensus 320 -lG~i~~~~~ 328 (527)
T PRK09275 320 -LGVIALHED 328 (527)
T ss_pred -HhhhhcCch
Confidence 688888775
No 222
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.74 E-value=3.4e-16 Score=160.71 Aligned_cols=214 Identities=13% Similarity=0.083 Sum_probs=149.5
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc------cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV------PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all------~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
....+.+++++++++|.+ ..+++++|++++..++.++. ++||+|+++++.|.+.. ..++..|+++..+
T Consensus 58 ~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~----~~~~~~G~~~~~v 133 (373)
T TIGR03812 58 KKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFE----KAAEMLGLELRYA 133 (373)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHH----HHHHHcCCeEEEE
Confidence 355688999999999974 45778888888877766553 46799999999887643 3345568887777
Q ss_pred CC-----CCHHHHHHhccCCCce-EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc--------cchh--
Q 012321 281 DP-----ADMEGLEAALNNNNVS-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--------QKAL-- 344 (466)
Q Consensus 281 d~-----~D~e~Le~ai~~~~tk-lV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~--------~~pl-- 344 (466)
+. .|+++++++++++ +. ++++ +|+||+|.+.|+++|.++||++|+++|+|++|+.+.. ....
T Consensus 134 ~~~~~~~~d~~~l~~~l~~~-~~~vv~~-~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~ 211 (373)
T TIGR03812 134 PLDEDYTVDVKDVEDLIDDN-TIGIVGI-AGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDF 211 (373)
T ss_pred eeCCCCCcCHHHHHHHHhhC-cEEEEEE-CCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccc
Confidence 53 4899999999775 54 5555 5899999999999999999999999999999864321 0111
Q ss_pred -ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCC--------CchHH---HHHHHHHhh--HHHHHHH
Q 012321 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--------ALNPN---AAYLIIRGM--KTLHLRV 410 (466)
Q Consensus 345 -~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~--------~ls~~---~A~l~lrgL--~tl~~R~ 410 (466)
..|+|.+..|.+|+..++. ..||+++.++++++.++........ +.+.. .++.+++.+ +.++.+.
T Consensus 212 ~~~~~d~~~~s~~K~~~~~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~ 290 (373)
T TIGR03812 212 SLPGVQSITIDPHKMGLSPI-PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIV 290 (373)
T ss_pred cCCCCCEEEECccccCCCcC-CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHH
Confidence 2378999999999754443 2356777888888776422111111 11122 222333322 3345677
Q ss_pred HHHHHHHHHHHHHHHcCCC
Q 012321 411 QQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 411 e~~~~na~~La~~L~~~p~ 429 (466)
++..++++++.+.|++.+.
T Consensus 291 ~~~~~~~~~l~~~L~~~g~ 309 (373)
T TIGR03812 291 AECMENTRYLVEELKKIGF 309 (373)
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 8888999999999998753
No 223
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.73 E-value=5.7e-16 Score=161.19 Aligned_cols=218 Identities=15% Similarity=0.168 Sum_probs=150.9
Q ss_pred cCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhh---------c
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETV---------L 270 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all~pG-D~VLv~~~~y~~t~~~~~~~---------l 270 (466)
..+|.++...+|+++|+++.+. +.+++++||++|+..++.....+| ++|+..++.|++........ +
T Consensus 79 ~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 158 (398)
T PRK03244 79 SNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPF 158 (398)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCC
Confidence 4567778889999999999874 467778899999999998766666 56777777887743221111 1
Q ss_pred ccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCC------c
Q 012321 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL------N 340 (466)
Q Consensus 271 ~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~------~ 340 (466)
...+.++..++..|++++++.+++ ++++|++|.++||+|.+.+ +++|.++|+++|+++|+||++...- .
T Consensus 159 ~~~~~~~~~~~~~d~~~l~~~~~~-~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~ 237 (398)
T PRK03244 159 EPLPGGVEHVPYGDVDALAAAVDD-DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFA 237 (398)
T ss_pred CCCCCCceEeCCCCHHHHHHhhcC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHh
Confidence 112234455566689999999865 4999999999999999987 8899999999999999999985310 1
Q ss_pred cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHHH
Q 012321 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTAL 418 (466)
Q Consensus 341 ~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~na~ 418 (466)
........|++ +++|.+++ | ...|++++++++++.+...........++..+..++..|+.+. ...++..+..+
T Consensus 238 ~~~~~~~pDi~--t~sK~l~~-G-~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~ 313 (398)
T PRK03244 238 HQHDGVTPDVV--TLAKGLGG-G-LPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGE 313 (398)
T ss_pred hhhhCCCCCEE--EEchhhhC-C-cccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 11112235765 67899985 3 4578888888888877542222222345555555555554332 34456666777
Q ss_pred HHHHHHHc
Q 012321 419 RMAKILEA 426 (466)
Q Consensus 419 ~La~~L~~ 426 (466)
++.+.|++
T Consensus 314 ~l~~~L~~ 321 (398)
T PRK03244 314 QLRAGIEA 321 (398)
T ss_pred HHHHHHHh
Confidence 78888877
No 224
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.73 E-value=6.8e-16 Score=162.76 Aligned_cols=212 Identities=15% Similarity=0.151 Sum_probs=157.4
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHH-HHHHHHHHHhcc---CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 210 PTTVVVEEKMSALEGAE---STVIMASGM-SASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~~~SG~-aAi~~al~all~---pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
..+..|++.++++.|.+ .++++++|+ .++.+++.++-. +||+||++...|.++... +...|++..++|.
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kA----i~~~G~~pv~Vd~ 180 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKA----ISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHH----HHHcCCeEEEeee
Confidence 45778899999999987 799999999 688877776542 689999999988876643 3445666666652
Q ss_pred --------CCHHHHHHhccCC--CceEEEEeCCC-CCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc------chhc
Q 012321 283 --------ADMEGLEAALNNN--NVSLFFTESPT-NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALS 345 (466)
Q Consensus 283 --------~D~e~Le~ai~~~--~tklV~lesPs-NPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~------~pl~ 345 (466)
.|+++|+++|++. ++.++++.+|+ .+.|.+.|+++|.++|++||+++|+|++|+..... ....
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~ 260 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIK 260 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcccc
Confidence 3899999999752 35677776775 45568899999999999999999999999854321 2233
Q ss_pred cC-CcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHHHHHHHH--HhhHHHHHHHHHHHHHHHHHH
Q 012321 346 LG-ADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLII--RGMKTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 346 ~g-aDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~~A~l~l--rgL~tl~~R~e~~~~na~~La 421 (466)
.| +|++++|++|++..+++ ||+++. +++++++++............+.+|+.+ .|.+.+...++++.++++.+.
T Consensus 261 ~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~ 338 (444)
T TIGR03531 261 VGRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLK 338 (444)
T ss_pred ccCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 44 69999999999998764 677766 6788887776432221222334455443 466888888999999999999
Q ss_pred HHHHcC
Q 012321 422 KILEAH 427 (466)
Q Consensus 422 ~~L~~~ 427 (466)
+.|++.
T Consensus 339 ~~L~~l 344 (444)
T TIGR03531 339 ELLQKL 344 (444)
T ss_pred HHHHHH
Confidence 988875
No 225
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.73 E-value=5.3e-16 Score=166.52 Aligned_cols=144 Identities=17% Similarity=0.255 Sum_probs=107.0
Q ss_pred EEEeCC-HHHHHHHHHHH-----hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------------CCHHHHH
Q 012321 228 TVIMAS-GMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------------ADMEGLE 289 (466)
Q Consensus 228 ~v~~~S-G~aAi~~al~a-----ll~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~------------~D~e~Le 289 (466)
.|++++ |++|+..++.+ ++.|||+|++++|.|+....... +...|+++..++. .|.++++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~--l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~ 234 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPE--LPRYDFEVVRIKADEMTEDGTHTWQYPDKELE 234 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHH--HhcCCcEEEEeecccccccccccCCCCHHHHH
Confidence 455555 55999888876 68999999999999998654332 2334555544432 3678899
Q ss_pred HhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhc--CCEEEEeCCCCCCCc--cchhcc--CCcEEEeccccccc
Q 012321 290 AALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK--GAIVCIDGTFATPLN--QKALSL--GADLVLHSATKFIG 360 (466)
Q Consensus 290 ~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~--gillIvD~t~a~~~~--~~pl~~--gaDivv~S~sK~lg 360 (466)
+++++ ++|+|++++|+||||.+++ +++|+++|+++ ++++|+||+|..... ...... ...|++.|+||+++
T Consensus 235 ~~~~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 235 KLRDP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFG 313 (521)
T ss_pred HhcCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhcc
Confidence 88876 4999999999999999997 67788889886 899999999876432 111121 23489999999999
Q ss_pred cccCceEEEEEeChH
Q 012321 361 GHNDVLAGSISGSGK 375 (466)
Q Consensus 361 G~gdv~gG~vvg~~e 375 (466)
.+|+. .||++++++
T Consensus 314 ~~G~R-lG~i~~~~~ 327 (521)
T TIGR03801 314 ATGWR-LGTIALHKD 327 (521)
T ss_pred Cchhh-hhhhhcCch
Confidence 98865 688888754
No 226
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.72 E-value=7.7e-16 Score=160.50 Aligned_cols=217 Identities=16% Similarity=0.147 Sum_probs=150.1
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc---------CC-CEEEEcCCCccchH-HHHHhhc-----
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKTR-IFIETVL----- 270 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~---------pG-D~VLv~~~~y~~t~-~~~~~~l----- 270 (466)
..++...+|+++|+++.+.+.+++++||++|+..++..... +| ++||..+..|++.. ..+...-
T Consensus 79 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~ 158 (396)
T PRK04073 79 FHSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYK 158 (396)
T ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccc
Confidence 45677889999999999888999999999999988876531 34 67888877776633 2221100
Q ss_pred ccCC---cEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc-c-
Q 012321 271 PKMG---ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-Q- 341 (466)
Q Consensus 271 ~~~g---i~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~~-~- 341 (466)
..++ ..+..++..|++++++.++++ +++|++|.|+||+|.+.+ +++|.++|+++|+++|+||+|..... .
T Consensus 159 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~-~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~ 237 (396)
T PRK04073 159 RGFGPMLPGIKKIPYGDLEALKAAITPN-TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK 237 (396)
T ss_pred cCCCCCCCCceEeCCCCHHHHHHhcccC-eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH
Confidence 0011 123445666899999999764 999999999999999876 88999999999999999999864211 1
Q ss_pred ----chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHH
Q 012321 342 ----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (466)
Q Consensus 342 ----~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~ 415 (466)
.......|+++ ++|.+++++. ..|++++++++++.+...........++..+..++..|+.+. ...++..+
T Consensus 238 ~~~~~~~~~~pdi~~--~sK~lg~gg~-~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~ 314 (396)
T PRK04073 238 LFACDWDNVTPDMYI--LGKALGGGVF-PISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLE 314 (396)
T ss_pred HHHhhhcCCCCCEEE--ecccccCCCC-cceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 11222356664 6899998653 468889999998877542221112245666655555555432 23455566
Q ss_pred HHHHHHHHHHcC
Q 012321 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
..+++.+.|++.
T Consensus 315 ~~~~l~~~L~~l 326 (396)
T PRK04073 315 LGEYFKEQLKEI 326 (396)
T ss_pred HHHHHHHHHHhh
Confidence 777888888764
No 227
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.71 E-value=1.5e-15 Score=152.89 Aligned_cols=223 Identities=22% Similarity=0.319 Sum_probs=151.8
Q ss_pred CCCccCCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCccchHHHHH------hh
Q 012321 200 ASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------TV 269 (466)
Q Consensus 200 ~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~---~~SG~aAi~~al~all~pGD~VLv~~-~~y~~t~~~~~------~~ 269 (466)
.+|.|+ +.-++.||+..|+.+|+|++++ +.||+.||.++|..+++|||+++... .-|......+. ..
T Consensus 47 TGYGY~---D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GS 123 (403)
T PF06838_consen 47 TGYGYD---DIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGS 123 (403)
T ss_dssp -TT-TT----HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSS
T ss_pred CcCCCC---CccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCC
Confidence 466666 6679999999999999999998 68999999999999999999998644 44655444441 23
Q ss_pred cccCCcEEEEeCC-----CCHHHHHHhccCCCceEEEEeCCC----CCCcccccHHHHHHHHHh--cCCEEEEeCCCCCC
Q 012321 270 LPKMGITATVIDP-----ADMEGLEAALNNNNVSLFFTESPT----NPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATP 338 (466)
Q Consensus 270 l~~~gi~v~~vd~-----~D~e~Le~ai~~~~tklV~lesPs----NPtG~v~dl~~I~ela~~--~gillIvD~t~a~~ 338 (466)
++.+||..+.++. .|.+.++++++++ ||+|++.-.. -|...+.+|+++++++|+ .+++++|||+|+.+
T Consensus 124 L~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~-tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEF 202 (403)
T PF06838_consen 124 LKEFGIKYREVPLTEDGTIDWEAIKKALKPN-TKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEF 202 (403)
T ss_dssp TGGGT-EEEE--B-TTSSB-HHHHHHHHHTT-EEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTT
T ss_pred hHHhCceeEEEeecCCCCcCHHHHHHhhccC-ceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCccee
Confidence 5678999988873 3799999999974 9999997653 345666688888888887 47999999999987
Q ss_pred Cc-cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHH------hCCCchHHHHHHHHHhhHHHHHHHH
Q 012321 339 LN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV------LGGALNPNAAYLIIRGMKTLHLRVQ 411 (466)
Q Consensus 339 ~~-~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~------~G~~ls~~~A~l~lrgL~tl~~R~e 411 (466)
.- ..|.+.|+|++..|+-|-.||.--..||+++|+++++++....... .|.++.. ..+.++||=--+..+.
T Consensus 203 vE~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~--~R~~~QGlFlAP~vV~ 280 (403)
T PF06838_consen 203 VETQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGT--NRLMFQGLFLAPHVVG 280 (403)
T ss_dssp TSSS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTT--HHHHHHHHHHHHHHHH
T ss_pred ccccCccccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcch--HHHHHhHHhhchHHHH
Confidence 65 6788999999999999999987666799999999999987643332 2333322 2334556655555566
Q ss_pred HHHHHHHHHHHHHHcCC
Q 012321 412 QQNSTALRMAKILEAHP 428 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p 428 (466)
+..+.+...+..+++..
T Consensus 281 eAlKgaif~A~~fe~lG 297 (403)
T PF06838_consen 281 EALKGAIFAAALFEKLG 297 (403)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 66677777777777653
No 228
>PRK02769 histidine decarboxylase; Provisional
Probab=99.71 E-value=1.5e-15 Score=157.92 Aligned_cols=234 Identities=18% Similarity=0.158 Sum_probs=162.7
Q ss_pred CCccCCCCchhHHHHHHHHHhhhCCC--c--EEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhcccCC
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g~e--~--~v~~~SG~aAi~~al~al--l~pGD~VLv~~~~y~~t~~~~~~~l~~~g 274 (466)
.+.|++......+++.+.+++++|.+ + .+++++|++++..++... ..++++|++++..|.+...... .+...+
T Consensus 56 ~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~-~lg~~~ 134 (380)
T PRK02769 56 KSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIAR-LLRIKS 134 (380)
T ss_pred cCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHH-HcCCCC
Confidence 34455555566677788889999963 3 466677788887665543 3578999999999999765543 232222
Q ss_pred cEEEEeC--CCCHHHHHHhccCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcC---CEEEEeCCCCCCCcc---c--
Q 012321 275 ITATVID--PADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCIDGTFATPLNQ---K-- 342 (466)
Q Consensus 275 i~v~~vd--~~D~e~Le~ai~~~--~tklV~lesPsNPtG~v~dl~~I~ela~~~g---illIvD~t~a~~~~~---~-- 342 (466)
..+...+ ..|+++|+++++++ +|.+|.+..++|++|.+.|+++|+++|+++| +++++|.+++.+... .
T Consensus 135 ~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~ 214 (380)
T PRK02769 135 RVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPP 214 (380)
T ss_pred ceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccc
Confidence 3333222 25899999999763 3889999999999999999999999999998 699999998875431 1
Q ss_pred hh--ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH--------HhCCC--chHHHHHHHHH--hhHHHHH
Q 012321 343 AL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGA--LNPNAAYLIIR--GMKTLHL 408 (466)
Q Consensus 343 pl--~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--------~~G~~--ls~~~A~l~lr--gL~tl~~ 408 (466)
++ ..++|.+..|.||++++|-+ .|+++.+++..+.+..... ..|+. ......|.+++ +...+..
T Consensus 215 ~~d~~~~vDsis~s~HK~~~~P~g--~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~ 292 (380)
T PRK02769 215 PFSFADGIDSIAISGHKFIGSPMP--CGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQ 292 (380)
T ss_pred cCCccCCCCEEEECCcccCCCCCC--cEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHH
Confidence 12 23899999999999986653 5788777776655421111 11221 23455666554 3445677
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcEEEeCCCC
Q 012321 409 RVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 409 R~e~~~~na~~La~~L~~~p~V~~V~~PgL 438 (466)
++++..+.++++.+.|++. ++..+..|.+
T Consensus 293 ~~~~~~~la~~l~~~L~~~-g~~~~~~p~~ 321 (380)
T PRK02769 293 RVQHCLDMAQYAVDRLQAN-GIPAWRNPNS 321 (380)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCEEEcCCCc
Confidence 7888899999999999874 5555555543
No 229
>PLN03032 serine decarboxylase; Provisional
Probab=99.71 E-value=9.7e-16 Score=158.73 Aligned_cols=234 Identities=16% Similarity=0.106 Sum_probs=168.4
Q ss_pred cccCCCccCCCCchhHHHHHHHHHhhhCCC--c--EEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc
Q 012321 197 KRRASFEYGRYGNPTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL 270 (466)
Q Consensus 197 ~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e--~--~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l 270 (466)
++...+.|++......+++.+.+++++|.+ + .+++++|++|+..++.... .++++|+++...|.+......
T Consensus 53 nP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~--- 129 (374)
T PLN03032 53 DPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR--- 129 (374)
T ss_pred CCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHH---
Confidence 444456777777788888999999999973 3 4788888999988776543 345689999999998765442
Q ss_pred ccCCcEEEEe--C---CCCHHHHHHhccCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcC-----CEEEEeCCCCCC
Q 012321 271 PKMGITATVI--D---PADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-----AIVCIDGTFATP 338 (466)
Q Consensus 271 ~~~gi~v~~v--d---~~D~e~Le~ai~~~--~tklV~lesPsNPtG~v~dl~~I~ela~~~g-----illIvD~t~a~~ 338 (466)
.+|+.++.+ + ..|+++|+++|+++ +|.+|++...+|++|.+.|+++|+++|+++| +++++|.+++.+
T Consensus 130 -~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~ 208 (374)
T PLN03032 130 -MYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGL 208 (374)
T ss_pred -HcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhh
Confidence 233333333 3 35899999999763 3778888889999999999999999999996 589999998764
Q ss_pred Ccc-------chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH--------HhCCC--chHHHHHHHHH
Q 012321 339 LNQ-------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGA--LNPNAAYLIIR 401 (466)
Q Consensus 339 ~~~-------~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--------~~G~~--ls~~~A~l~lr 401 (466)
... -.+..++|.+..|.||+++.|- ..|+++.++++++.+..... ..|+- ...+..|..++
T Consensus 209 ~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~--g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~ 286 (374)
T PLN03032 209 MMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPM--PCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLR 286 (374)
T ss_pred hhhccCCCcccCCCcCCcEEEECcccccCCCc--CeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHH
Confidence 321 0123468999999999998554 35888887766655432111 12222 23566776654
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCC
Q 012321 402 --GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPG 437 (466)
Q Consensus 402 --gL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~Pg 437 (466)
|.+.+..++++..++++++.+.|++++ +..+.-|.
T Consensus 287 ~~G~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~p~ 323 (374)
T PLN03032 287 RKGYRGIKRDVQHCMRNAHYLKDRLTEAG-LTCRLNEL 323 (374)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEECCC
Confidence 667888999999999999999999863 33334443
No 230
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.71 E-value=2.6e-15 Score=156.28 Aligned_cols=216 Identities=18% Similarity=0.168 Sum_probs=147.5
Q ss_pred CchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcc---------cCC
Q 012321 208 GNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP---------KMG 274 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l~---------~~g 274 (466)
..+...+|+++++++.+ .+.+++++||++|+..++..+. .++|+|++.++.|++.......... ...
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL 156 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 46789999999999998 6788889999999999988763 6789999999999885433222111 112
Q ss_pred cEEEEeCCC-----------CHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCC
Q 012321 275 ITATVIDPA-----------DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 275 i~v~~vd~~-----------D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~ 337 (466)
.++..++.. |+++|++.+++ +++++|+++..+|++|.+.+ +++|.++|+++|+++|+||++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g 236 (413)
T cd00610 157 PGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTG 236 (413)
T ss_pred CCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 234445544 78899998875 34788888777778898887 99999999999999999999864
Q ss_pred CC-c-----cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHH--HHHHHHhCCCchHHHHHHHHHhhHHHH--
Q 012321 338 PL-N-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI--RNLHHVLGGALNPNAAYLIIRGMKTLH-- 407 (466)
Q Consensus 338 ~~-~-----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l--~~~~~~~G~~ls~~~A~l~lrgL~tl~-- 407 (466)
.. . ........|++ |++|++++ | ...|++++++++++.+ ...........++..+..+...++.+.
T Consensus 237 ~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-g-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~ 312 (413)
T cd00610 237 FGRTGKMFAFEHFGVEPDIV--TLGKGLGG-G-LPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEE 312 (413)
T ss_pred CCcCcchhhHhhcCCCCCeE--EEcccccC-c-cccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 21 1 11112234554 77899998 4 4578888999988886 222211122334554444444444432
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 012321 408 LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 408 ~R~e~~~~na~~La~~L~~~ 427 (466)
...++..++.+++.+.|++.
T Consensus 313 ~~~~~~~~~~~~l~~~l~~~ 332 (413)
T cd00610 313 GLLENAAELGEYLRERLREL 332 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 34556666777777766653
No 231
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.70 E-value=1.8e-15 Score=160.61 Aligned_cols=207 Identities=18% Similarity=0.150 Sum_probs=138.9
Q ss_pred HHHHHHhhhCCC-cEE-Ee---CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhc-c-----cCCcEEEEeC--
Q 012321 215 VEEKMSALEGAE-STV-IM---ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVL-P-----KMGITATVID-- 281 (466)
Q Consensus 215 Lee~lA~l~g~e-~~v-~~---~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l-~-----~~gi~v~~vd-- 281 (466)
.++++++++|++ +.+ +. +||++|+.+++.+++++||+|++.+..|++......... . ..++++..+.
T Consensus 85 ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~ 164 (452)
T PTZ00094 85 CQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN 164 (452)
T ss_pred HHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC
Confidence 346899999974 222 22 689999999999999999999999989987543221110 0 1112333322
Q ss_pred ---CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----cchhccCCcEEEe
Q 012321 282 ---PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLH 353 (466)
Q Consensus 282 ---~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-----~~pl~~gaDivv~ 353 (466)
..|+++|++.+++.++++|++. ++.+|...|+++|.++||++|+++++|++++.+.. ..++. ++|+++.
T Consensus 165 ~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-~~D~l~~ 241 (452)
T PTZ00094 165 EKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-YADVVTT 241 (452)
T ss_pred CCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-CCcEEEc
Confidence 3489999999965447888763 33589999999999999999999999999877654 22333 7999999
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHH-----HhCCCchHHHHHHHHHhhHHH-----HHHHHHHHHHHHHHHHH
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-----VLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKI 423 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~-----~~G~~ls~~~A~l~lrgL~tl-----~~R~e~~~~na~~La~~ 423 (466)
|+|||+.|+. ||+++.++++.+.+..... .+.++.++.....+...++.+ +.+.++..++++++.+.
T Consensus 242 S~hK~l~GP~---Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~ 318 (452)
T PTZ00094 242 TTHKSLRGPR---SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAA 318 (452)
T ss_pred CCccCCCCCC---ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 9999998875 5777766655443322111 111223333222222233332 34556778899999999
Q ss_pred HHcC
Q 012321 424 LEAH 427 (466)
Q Consensus 424 L~~~ 427 (466)
|++.
T Consensus 319 L~~~ 322 (452)
T PTZ00094 319 LEKR 322 (452)
T ss_pred HHhC
Confidence 9775
No 232
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.70 E-value=1.3e-15 Score=162.99 Aligned_cols=212 Identities=14% Similarity=0.185 Sum_probs=148.2
Q ss_pred hhHHHHHHHHHhhhCCCcEEEe-CCHHHHHHHH---HH-HhccCCC----EEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 210 PTTVVVEEKMSALEGAESTVIM-ASGMSASTVM---LL-ALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~v~~-~SG~aAi~~a---l~-all~pGD----~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
....++++++++++|.+.+.++ ++|+.+.... +. .++++|| +|+++++.|+.+... +...|+++..+
T Consensus 113 el~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~----~~~~G~~vv~v 188 (481)
T PRK04366 113 ELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPAS----AAMAGFKVVEI 188 (481)
T ss_pred HHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHH----HHHcCCEEEEe
Confidence 4567788999999998665555 5666443322 22 3456776 999999999886643 34568887776
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCccc-ccHHHHHHHHHhcCCEEEEeCCCCCCC--ccchhccCCcEEE
Q 012321 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVL 352 (466)
Q Consensus 281 d~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v-~dl~~I~ela~~~gillIvD~t~a~~~--~~~pl~~gaDivv 352 (466)
+. .|+++|+++++++ |++|++++|+ |+|.+ .|+++|+++||++|+++++|+++.... ...+.++|+|+++
T Consensus 189 ~~~~~~~~D~e~L~~~i~~~-t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~ 266 (481)
T PRK04366 189 PSNEDGLVDLEALKAAVGED-TAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVH 266 (481)
T ss_pred ecCCCCCcCHHHHHhhcccC-CeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEE
Confidence 43 4799999999875 9999999998 99977 489999999999999999999975331 1367788999999
Q ss_pred eccccccccccC---ceEEEEEeChHHHHHHHHH----------------------HHHhCCCchHHHHH--HHHHhhHH
Q 012321 353 HSATKFIGGHND---VLAGSISGSGKLVTQIRNL----------------------HHVLGGALNPNAAY--LIIRGMKT 405 (466)
Q Consensus 353 ~S~sK~lgG~gd---v~gG~vvg~~eli~~l~~~----------------------~~~~G~~ls~~~A~--l~lrgL~t 405 (466)
.+.||+|+++-+ --+|++..++++.+.+... +...+..+....+| +...|.+.
T Consensus 267 ~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~G 346 (481)
T PRK04366 267 LNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEG 346 (481)
T ss_pred EechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHH
Confidence 999999875521 1357888877766655210 00000111112333 33335555
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC
Q 012321 406 LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 406 l~~R~e~~~~na~~La~~L~~~ 427 (466)
+....+++.++++++.+.|++.
T Consensus 347 l~~~a~~~~~~a~~l~~~L~~~ 368 (481)
T PRK04366 347 LREVSEDAVLNANYLKARLKDI 368 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhHhh
Confidence 6666677788899999999876
No 233
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.70 E-value=4.2e-15 Score=155.37 Aligned_cols=160 Identities=18% Similarity=0.252 Sum_probs=118.0
Q ss_pred hHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCC---CEEEEcCCCccchHHHHHhhcccCCcEE----EEeC
Q 012321 211 TTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAG---GHIVTTTDCYRKTRIFIETVLPKMGITA----TVID 281 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~pG---D~VLv~~~~y~~t~~~~~~~l~~~gi~v----~~vd 281 (466)
..+.+++ + +++|+ ++.++++|+++++..++.+++++| ++|++.+..|++....+...+++.|+++ ..++
T Consensus 72 ~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~ 149 (406)
T TIGR01814 72 LDESLLK-L-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIE 149 (406)
T ss_pred hhhhhcc-c-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEec
Confidence 3444444 4 78886 356666667799999988887664 3688888999986655544455667665 3333
Q ss_pred C-----CCHHHHHHhcc--CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEe
Q 012321 282 P-----ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLH 353 (466)
Q Consensus 282 ~-----~D~e~Le~ai~--~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~ 353 (466)
. .|++++++.++ ..+|++|++++++|.+|.+.|+++|.++||++|+++++|++++.+.. .+..++|+|+++.
T Consensus 150 ~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~ 229 (406)
T TIGR01814 150 PREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACW 229 (406)
T ss_pred cCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEE
Confidence 2 26788888774 12499999999999999999999999999999999999999887643 3444679999999
Q ss_pred ccccccccccCceEEEEEeCh
Q 012321 354 SATKFIGGHNDVLAGSISGSG 374 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~ 374 (466)
|.+||++|+.. +|+++.++
T Consensus 230 s~hK~l~g~pG--~~l~v~~~ 248 (406)
T TIGR01814 230 CTYKYLNAGPG--AGAFVHEK 248 (406)
T ss_pred cCccccCCCCC--eEEEEehh
Confidence 99999965431 45444444
No 234
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.69 E-value=2.2e-15 Score=155.21 Aligned_cols=218 Identities=15% Similarity=0.133 Sum_probs=147.6
Q ss_pred CCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc---c----CCCEEEEcCCCccchHHHHHhh-c------
Q 012321 205 GRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---P----AGGHIVTTTDCYRKTRIFIETV-L------ 270 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all---~----pGD~VLv~~~~y~~t~~~~~~~-l------ 270 (466)
.++.++...+|++++++++|.++++++.||++|+..++..+. . +||+|++.++.|++........ .
T Consensus 64 ~~~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~ 143 (379)
T TIGR00707 64 NLYYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQK 143 (379)
T ss_pred cccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhc
Confidence 456788999999999999999999999999999998887542 2 3799999999997643222111 0
Q ss_pred --ccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc-c---cHHHHHHHHHhcCCEEEEeCCCCCCCc-cc-
Q 012321 271 --PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC-V---DVKLVSDLCHKKGAIVCIDGTFATPLN-QK- 342 (466)
Q Consensus 271 --~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v-~---dl~~I~ela~~~gillIvD~t~a~~~~-~~- 342 (466)
.....++.+++..|++++++.++++ +++|+++.++|++|.. . ++++|.++|+++|+++|+||+|..... ..
T Consensus 144 ~~~~~~~~~~~~~~~d~~~l~~~~~~~-~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~ 222 (379)
T TIGR00707 144 GFEPLVPGFSYAPYNDIESLKKAIDDE-TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF 222 (379)
T ss_pred cCCCCCCCceeeCCCCHHHHHHHhhhC-eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh
Confidence 0111223344455899999999774 8999997776777754 3 388999999999999999999863211 11
Q ss_pred -h---hccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHH
Q 012321 343 -A---LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 416 (466)
Q Consensus 343 -p---l~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~n 416 (466)
+ .....|++ +++|.++ +| .+.|++++++++++.++..........++..+..+...|+.+. ...++..++
T Consensus 223 ~~~~~~~~~~d~~--t~sK~~~-~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~ 298 (379)
T TIGR00707 223 FAYEHYGIEPDII--TLAKGLG-GG-VPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEK 298 (379)
T ss_pred hhHHhcCCCCCEE--EEccccc-CC-cccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 1 11234554 6899999 45 4578999999998887653322222345555555444444322 344556666
Q ss_pred HHHHHHHHHcC
Q 012321 417 ALRMAKILEAH 427 (466)
Q Consensus 417 a~~La~~L~~~ 427 (466)
++.+.+.|++.
T Consensus 299 ~~~~~~~l~~~ 309 (379)
T TIGR00707 299 GDYFKERLEEL 309 (379)
T ss_pred HHHHHHHHHHH
Confidence 77777766653
No 235
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.69 E-value=9.2e-16 Score=157.77 Aligned_cols=176 Identities=19% Similarity=0.235 Sum_probs=144.3
Q ss_pred HHHhcccCCCccCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc-cCCC----EEEEcCCCccchHHH
Q 012321 193 DFKEKRRASFEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-PAGG----HIVTTTDCYRKTRIF 265 (466)
Q Consensus 193 ~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all-~pGD----~VLv~~~~y~~t~~~ 265 (466)
.++.++... .|+....+..++.|+.+|++.|+ .+.+|+.++++++++++..+. ..+| +||+.+..|++....
T Consensus 69 ~~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s 147 (428)
T KOG1549|consen 69 EYLGNPHSR-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDS 147 (428)
T ss_pred HhhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHH
Confidence 345555444 57766777799999999999998 354444555599999998873 4567 999999999987655
Q ss_pred HHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-
Q 012321 266 IETVLPKMGITATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL- 339 (466)
Q Consensus 266 ~~~~l~~~gi~v~~vd~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~- 339 (466)
+. .++..|+++++++. .|.+.+++.|+++ |++|.+.+.+|..|.++|+++|.++|+++|+.+++|.+++.+.
T Consensus 148 ~~-~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~-T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i 225 (428)
T KOG1549|consen 148 CR-ALQEEGLEVTYLPVEDSGLVDISKLREAIRSK-TRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKI 225 (428)
T ss_pred HH-HHHhcCeEEEEeccCccccccHHHHHHhcCCC-ceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCc
Confidence 53 45666899988863 3789999999985 9999999999999999999999999999999999999998774
Q ss_pred ccchhccCCcEEEeccccccccccCceEEEEEeCh
Q 012321 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG 374 (466)
Q Consensus 340 ~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~ 374 (466)
..+.-++++|++..|.||++|.++ .|+++.++
T Consensus 226 ~vDV~eln~D~~s~s~HK~ygp~~---iGaLYvr~ 257 (428)
T KOG1549|consen 226 PVDVQELNADFLSISAHKIYGPPG---IGALYVRR 257 (428)
T ss_pred cccHHHcCchheeeecccccCCCc---ceEEEEcc
Confidence 356668899999999999999997 47887765
No 236
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.69 E-value=6.5e-16 Score=160.96 Aligned_cols=176 Identities=23% Similarity=0.365 Sum_probs=131.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
+.....+.++.+|+++|++.+.++++|+ .+|.+++++++++||+||+++++|.+.+..+ ...|+...++++
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~al----il~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNAL----ILSGAIPVYIPPEDNE 139 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHH----HHHTEEEEEEEEEE-T
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHH----HHcCCeEEEecCCccc
Confidence 4556889999999999999999999999 8999999999999999999999999977543 234555555532
Q ss_pred ------CCH-----HHHHHhccCCC----ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-----c
Q 012321 283 ------ADM-----EGLEAALNNNN----VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-----K 342 (466)
Q Consensus 283 ------~D~-----e~Le~ai~~~~----tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~-----~ 342 (466)
.++ +.|+++|++++ .++|++.+|+ ..|.+.|+++|+++||++|++|+|||+|+....+ .
T Consensus 140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~ 218 (417)
T PF01276_consen 140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRS 218 (417)
T ss_dssp TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTT
T ss_pred cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccc
Confidence 134 88988887532 3459998888 6899999999999999999999999998765433 2
Q ss_pred hhccCCc-------EEEeccccccccccCceEEEEEeChHH---HHHHHHHHHHhCCC
Q 012321 343 ALSLGAD-------LVLHSATKFIGGHNDVLAGSISGSGKL---VTQIRNLHHVLGGA 390 (466)
Q Consensus 343 pl~~gaD-------ivv~S~sK~lgG~gdv~gG~vvg~~el---i~~l~~~~~~~G~~ 390 (466)
...+|+| ++++|+||.+++.. .+.++..+.+. .++++.....+.++
T Consensus 219 a~~~gad~~~~~~~~vvqS~HKtL~alt--Qts~lh~~~~~~v~~~~~~~~l~~~~TT 274 (417)
T PF01276_consen 219 ALALGADRPNDPGIIVVQSTHKTLPALT--QTSMLHVKGDRIVDHERVNEALSMHQTT 274 (417)
T ss_dssp CSSTTSS-CTSBEEEEEEEHHHHSSS-T--T-EEEEEETCCCTTHHHHHHHHHHHS-S
T ss_pred hhhccCccccccceeeeechhhcccccc--cceEEEecCCCcccHHHHHHHHHHHcCC
Confidence 3467899 99999999999886 56777665442 46677666655543
No 237
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=1.4e-14 Score=149.09 Aligned_cols=214 Identities=19% Similarity=0.235 Sum_probs=161.1
Q ss_pred hhHHHHHHHHHhhhCCC--cEE-EeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-----
Q 012321 210 PTTVVVEEKMSALEGAE--STV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID----- 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e--~~v-~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd----- 281 (466)
.....+.+.|..+++.+ +++ +.+||+.++.+++.++++|||+||+......+.+ +.++++.+|.+++.++
T Consensus 38 ~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R--~~~ia~~~g~~v~~~~~~wg~ 115 (383)
T COG0075 38 GIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGER--FAEIAERYGAEVVVLEVEWGE 115 (383)
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHH--HHHHHHHhCCceEEEeCCCCC
Confidence 45667777888888865 444 4589999999999999999999999887766644 4577888998888775
Q ss_pred CCCHHHHHHhccCC-CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC-CCCccchhccCCcEEEecccccc
Q 012321 282 PADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFI 359 (466)
Q Consensus 282 ~~D~e~Le~ai~~~-~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a-~~~~~~pl~~gaDivv~S~sK~l 359 (466)
..|+++++++++++ ..++|.+.+--.+||.+.|+++|+++|++||+++|||.+-+ .+...+..++|+|+++.+..|.|
T Consensus 116 ~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l 195 (383)
T COG0075 116 AVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKAL 195 (383)
T ss_pred CCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhc
Confidence 34899999999843 47788887776788999999999999999999999999865 34567788999999999999999
Q ss_pred ccccCceEEEEEeChHHHHHHHH------------HHHHh---C---CCchHHHHHHHHHhhH-----HHHHHHHHHHHH
Q 012321 360 GGHNDVLAGSISGSGKLVTQIRN------------LHHVL---G---GALNPNAAYLIIRGMK-----TLHLRVQQQNST 416 (466)
Q Consensus 360 gG~gdv~gG~vvg~~eli~~l~~------------~~~~~---G---~~ls~~~A~l~lrgL~-----tl~~R~e~~~~n 416 (466)
+++.+ .|++..+++.++.+.. +...+ + .+.+...-+.+...|+ -++.|.++|+++
T Consensus 196 ~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~ 273 (383)
T COG0075 196 GAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRL 273 (383)
T ss_pred cCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 98873 5788877766655432 11111 1 1122111222222222 267899999999
Q ss_pred HHHHHHHHHcC
Q 012321 417 ALRMAKILEAH 427 (466)
Q Consensus 417 a~~La~~L~~~ 427 (466)
++.+.+.+++.
T Consensus 274 ~~a~r~~~~al 284 (383)
T COG0075 274 AEALRAGLEAL 284 (383)
T ss_pred HHHHHHHHHHc
Confidence 99999999864
No 238
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.68 E-value=1e-14 Score=151.71 Aligned_cols=216 Identities=19% Similarity=0.167 Sum_probs=143.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc----------CCCEEEEcCCCccchHHHHHhhcc------
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP----------AGGHIVTTTDCYRKTRIFIETVLP------ 271 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~----------pGD~VLv~~~~y~~t~~~~~~~l~------ 271 (466)
..+..+.+++.++++.+.+.+++++||++|+..++..... .+++||+.+..|.+..........
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~ 150 (400)
T PTZ00125 71 YNDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYN 150 (400)
T ss_pred cCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhc
Confidence 3578889999999999889999999999999999886631 357888888887774322211110
Q ss_pred ---cCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC-Cccc-
Q 012321 272 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LNQK- 342 (466)
Q Consensus 272 ---~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~-~~~~- 342 (466)
...-.+..++..|+++|++.++..++++|++|+++||+|.+.+ +++|.++|++||+++|+||++... ....
T Consensus 151 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~ 230 (400)
T PTZ00125 151 NFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKL 230 (400)
T ss_pred cCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh
Confidence 0001233455668999999996335999999999999999987 999999999999999999997531 1111
Q ss_pred --h--hccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHH--HHHHHHHH
Q 012321 343 --A--LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 416 (466)
Q Consensus 343 --p--l~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~~--R~e~~~~n 416 (466)
. .....|+++ ++|.++++.. ..|++++++++++.+...........++..+..+...++.+.. ..++..+.
T Consensus 231 ~~~~~~~~~pd~~~--~sK~l~~g~~-~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~ 307 (400)
T PTZ00125 231 LAHDHEGVKPDIVL--LGKALSGGLY-PISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRL 307 (400)
T ss_pred hHHHhcCCCCCEEE--EcccccCCCc-CcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 1 112347765 5699987532 4688899999988875432211122355555555544544321 22333344
Q ss_pred HHHHHHHHHc
Q 012321 417 ALRMAKILEA 426 (466)
Q Consensus 417 a~~La~~L~~ 426 (466)
.+.+.+.|++
T Consensus 308 ~~~l~~~l~~ 317 (400)
T PTZ00125 308 GEVFRDGLKE 317 (400)
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 239
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.68 E-value=7.9e-15 Score=153.58 Aligned_cols=214 Identities=19% Similarity=0.229 Sum_probs=152.2
Q ss_pred ccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHH-HHhhcccCCcEEEEe-
Q 012321 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF-IETVLPKMGITATVI- 280 (466)
Q Consensus 203 ~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~-~~~~l~~~gi~v~~v- 280 (466)
.|+ ++|+..+||+.+++++|.+.++.++||++|+.++....++|||+| +.+.|..+... + ...|....-+
T Consensus 66 ~ya--g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahI----e~~Gav~vDi~ 137 (450)
T TIGR02618 66 AYA--GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQ----EKNGATFVDII 137 (450)
T ss_pred hhc--CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHH----HhCCeEEEeee
Confidence 466 789999999999999999999999999999888776678999977 56777555433 2 1223222112
Q ss_pred -C-------------CCCHHHHHHhccCC---CceEEEEeCCCCCC-cccc---cHHHHHHHHHhcCCEEEEeCCCCC--
Q 012321 281 -D-------------PADMEGLEAALNNN---NVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGTFAT-- 337 (466)
Q Consensus 281 -d-------------~~D~e~Le~ai~~~---~tklV~lesPsNPt-G~v~---dl~~I~ela~~~gillIvD~t~a~-- 337 (466)
+ ..|+++|+++|+++ ++++|.+++++|.. |.++ ++++|.++|++||+.||.|.+...
T Consensus 138 ~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gN 217 (450)
T TIGR02618 138 IDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVEN 217 (450)
T ss_pred cccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhC
Confidence 1 13899999999763 35688999999966 7884 589999999999999999998433
Q ss_pred C---------Cccchh-------ccCCcEEEeccccccccccCceEEEEE-eChHHHHHHHHHHHHhCC-----CchHHH
Q 012321 338 P---------LNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGG-----ALNPNA 395 (466)
Q Consensus 338 ~---------~~~~pl-------~~gaDivv~S~sK~lgG~gdv~gG~vv-g~~eli~~l~~~~~~~G~-----~ls~~~ 395 (466)
. +...+. ...+|.++.|+.|..+++ +||+++ .+++++++++.+...+++ .+..-.
T Consensus 218 A~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~---~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~ 294 (450)
T TIGR02618 218 AYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN---IGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRD 294 (450)
T ss_pred hhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC---CceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhh
Confidence 1 212222 236899999999999887 478888 678999999988766643 222212
Q ss_pred HHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHcC
Q 012321 396 AYLIIRGMKTLH--LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 396 A~l~lrgL~tl~--~R~e~~~~na~~La~~L~~~ 427 (466)
-..+..+|+..- ...+...+++++|++.|++.
T Consensus 295 ~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~ 328 (450)
T TIGR02618 295 MEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA 328 (450)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 111223444322 23344456799999999887
No 240
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.67 E-value=1.5e-14 Score=145.56 Aligned_cols=217 Identities=17% Similarity=0.187 Sum_probs=152.2
Q ss_pred chhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 209 NPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g--------~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
.......++++|++.. +++++++++..+||..++.++.+||-.|++++|.|+-.. ....-.|++++++
T Consensus 102 s~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~----~~a~~~~lEVR~y 177 (447)
T KOG0259|consen 102 SVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYD----TRAIYSGLEVRYY 177 (447)
T ss_pred ccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHH----HhhhhcCceeEee
Confidence 3344555666666632 244554444459999999999999999999999998633 3344568999988
Q ss_pred CC-------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-cch---h-c
Q 012321 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-QKA---L-S 345 (466)
Q Consensus 281 d~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~-~~p---l-~ 345 (466)
|. .|++.+|..++++ |.++++.+|+||+|.+++ +++|+++|+++|+++|.||.|...++ .+| . .
T Consensus 178 dlLPe~~weIDL~~veal~DEN-T~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~ 256 (447)
T KOG0259|consen 178 DLLPEKDWEIDLDGVEALADEN-TVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGK 256 (447)
T ss_pred cccCcccceechHHHHHhhccC-eeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhh
Confidence 74 3899999999985 999999999999999996 78999999999999999999875433 111 1 1
Q ss_pred cC---CcEEEeccccccccccCceEEEEEeC-h-------HHHHHHHHHHHHhCCCchHHHHHH---HHH-hhHHHHHHH
Q 012321 346 LG---ADLVLHSATKFIGGHNDVLAGSISGS-G-------KLVTQIRNLHHVLGGALNPNAAYL---IIR-GMKTLHLRV 410 (466)
Q Consensus 346 ~g---aDivv~S~sK~lgG~gdv~gG~vvg~-~-------eli~~l~~~~~~~G~~ls~~~A~l---~lr-gL~tl~~R~ 410 (466)
+. .-+.+.+.+|-+--+||. .||++.. + ..++.+............-..+.+ +.+ --+.+..++
T Consensus 257 fssiVPVitlggisKrW~VPGWR-lGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~ 335 (447)
T KOG0259|consen 257 FSSIVPVITLGGISKRWIVPGWR-LGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKL 335 (447)
T ss_pred ccccCceEeecccccccccCCce-eeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHH
Confidence 11 247889999999999997 5666543 2 233444444433322211122221 111 123356677
Q ss_pred HHHHHHHHHHHHHHHcCCCcE
Q 012321 411 QQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 411 e~~~~na~~La~~L~~~p~V~ 431 (466)
.-...|++...++|++.|.+.
T Consensus 336 ~~lk~na~l~y~~Lk~IP~l~ 356 (447)
T KOG0259|consen 336 SFLKSNADLCYSRLKDIPCLT 356 (447)
T ss_pred HHHHhhHHHHHHHHhcCCCcc
Confidence 778899999999999999876
No 241
>PRK08637 hypothetical protein; Provisional
Probab=99.67 E-value=1.3e-14 Score=150.75 Aligned_cols=151 Identities=15% Similarity=0.179 Sum_probs=106.2
Q ss_pred EEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC------CCCHHHHHHhcc---CCCc
Q 012321 228 TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID------PADMEGLEAALN---NNNV 297 (466)
Q Consensus 228 ~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd------~~D~e~Le~ai~---~~~t 297 (466)
.+++++|. +++.+++.+++++||+|++++|+|+.....+.. ..|.++..++ ..|++++++.++ +++.
T Consensus 71 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~ 147 (388)
T PRK08637 71 LPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNT---RRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGK 147 (388)
T ss_pred eeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHH---hcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCC
Confidence 45666665 999999999999999999999999886543321 2465655543 247899988876 2336
Q ss_pred eEEEEeCCCCCCccccc---HHHHHHHHHh-----cCCEEEEeCCCCCCCcc----ch-h----cc-CCc--EEEecccc
Q 012321 298 SLFFTESPTNPFLRCVD---VKLVSDLCHK-----KGAIVCIDGTFATPLNQ----KA-L----SL-GAD--LVLHSATK 357 (466)
Q Consensus 298 klV~lesPsNPtG~v~d---l~~I~ela~~-----~gillIvD~t~a~~~~~----~p-l----~~-gaD--ivv~S~sK 357 (466)
+++++++|+||||.+++ +++|+++|++ +++++|+||+|...... .+ . .. +.- +.+.|+||
T Consensus 148 ~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK 227 (388)
T PRK08637 148 VIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATK 227 (388)
T ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccc
Confidence 67889999999999986 5567776664 89999999998654221 11 1 11 111 23459999
Q ss_pred ccccccCceEEEEEe------ChHHHHHHHH
Q 012321 358 FIGGHNDVLAGSISG------SGKLVTQIRN 382 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg------~~eli~~l~~ 382 (466)
.++.+|. +.||++. ++++++.+..
T Consensus 228 ~~~~pGl-RlG~~~~~~~~~~~~~l~~~~~~ 257 (388)
T PRK08637 228 EEFVWGF-RVGFITFGTKAGSSQTVKEALEK 257 (388)
T ss_pred cCCCccc-ceEEEEEccccCCcHHHHHHHHH
Confidence 9888884 5788774 3677777654
No 242
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.67 E-value=1.3e-14 Score=153.13 Aligned_cols=217 Identities=15% Similarity=0.011 Sum_probs=150.1
Q ss_pred hhHHHHHHHHHhhhCCC----cEEE--eCCHHHHHHHHHHHhc----c----CC-----CEEEEcCCCccchHHHHHhhc
Q 012321 210 PTTVVVEEKMSALEGAE----STVI--MASGMSASTVMLLALV----P----AG-----GHIVTTTDCYRKTRIFIETVL 270 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e----~~v~--~~SG~aAi~~al~all----~----pG-----D~VLv~~~~y~~t~~~~~~~l 270 (466)
...++.++++++++|.+ +.++ +++|++|+..++.+.. . .| .+|++++..|.+.....
T Consensus 80 ~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~---- 155 (431)
T TIGR01788 80 EIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFA---- 155 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHH----
Confidence 45666788899999875 3333 5777799988876543 1 12 37999999998866443
Q ss_pred ccCCcEEEEeCC------CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc------CCEEEEeCCCCCC
Q 012321 271 PKMGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATP 338 (466)
Q Consensus 271 ~~~gi~v~~vd~------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~------gillIvD~t~a~~ 338 (466)
+..|++++.++. .|+++|+++|+++ |.+|.+...+|.+|.+.|+++|+++|+++ |+++++|.+|+.+
T Consensus 156 ~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~-t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~ 234 (431)
T TIGR01788 156 RYFDVELREVPMDPGRYVIDPEQVVEAVDEN-TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGF 234 (431)
T ss_pred HHcCceeEEEecCCCceeeCHHHHHHHHhhC-CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHH
Confidence 334666555431 3789999999875 89999999999999999999999999999 9999999998842
Q ss_pred C-------c-cchhccCCcEEEeccccccccccCceEEEEEeChH--HHHHHHHHHHHhCC----------C--chHHHH
Q 012321 339 L-------N-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--LVTQIRNLHHVLGG----------A--LNPNAA 396 (466)
Q Consensus 339 ~-------~-~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~e--li~~l~~~~~~~G~----------~--ls~~~A 396 (466)
. . .+....++|.+..|.||++.++-+ .|+++.+++ +.+.+......++. . ......
T Consensus 235 ~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~ 312 (431)
T TIGR01788 235 IAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQ 312 (431)
T ss_pred HHHHhCCCchhhcCCCCceEEEECchhccCCCCC--cEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHH
Confidence 2 1 111134789999999999855542 477665543 22322111011111 1 122345
Q ss_pred HHHHHh--hHHHHHHHHHHHHHHHHHHHHHHcCCCcEEE
Q 012321 397 YLIIRG--MKTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 397 ~l~lrg--L~tl~~R~e~~~~na~~La~~L~~~p~V~~V 433 (466)
|+.++. ...+..++++..+.++++.+.|+++|.++.+
T Consensus 313 w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~ 351 (431)
T TIGR01788 313 YYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEII 351 (431)
T ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEe
Confidence 665543 4567777888999999999999999877544
No 243
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.67 E-value=4.1e-15 Score=154.23 Aligned_cols=217 Identities=17% Similarity=0.189 Sum_probs=145.5
Q ss_pred cCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCC-------CEEEEcCCCccchHHHHHhhc-c----
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAG-------GHIVTTTDCYRKTRIFIETVL-P---- 271 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pG-------D~VLv~~~~y~~t~~~~~~~l-~---- 271 (466)
...+.++...+|+++|+++.+.+.++++++|++|+.+++..+...+ ++|++.++.|.+........- .
T Consensus 75 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 154 (396)
T PRK02627 75 SNLYYIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQ 154 (396)
T ss_pred ccccCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCcccc
Confidence 3456689999999999999988889999999999999998765443 679999999876432211110 0
Q ss_pred ----cCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc-ccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-cc
Q 012321 272 ----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR-CVD---VKLVSDLCHKKGAIVCIDGTFATPLN-QK 342 (466)
Q Consensus 272 ----~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~-v~d---l~~I~ela~~~gillIvD~t~a~~~~-~~ 342 (466)
...-.+..++..|++++++++.+ ++++|++|.++||+|. +.+ +++|.++|+++|+++|+||+|..... ..
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~ 233 (396)
T PRK02627 155 EGFEPLVEGFIYVPFNDIEALKAAITD-KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK 233 (396)
T ss_pred ccCCCCCCCceEeCCCCHHHHHHhcCC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc
Confidence 00112233455589999999976 4999999999999984 443 78999999999999999999863211 11
Q ss_pred --h-hccC--CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHH
Q 012321 343 --A-LSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (466)
Q Consensus 343 --p-l~~g--aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~ 415 (466)
. ...+ .|++ +++|.+++ | .+.|++++++++++.+...........++..+..++..++.+. ..+++..+
T Consensus 234 ~~~~~~~~~~pdi~--t~sK~~~~-G-~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~ 309 (396)
T PRK02627 234 LFAYQHYGIEPDIM--TLAKGLGG-G-VPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAE 309 (396)
T ss_pred eeeehhcCCCCCEE--EEcchhhC-C-cccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 1 1123 4544 68999994 4 4678899999888877543222223346666665555555432 22344444
Q ss_pred HHHHHHHHHH
Q 012321 416 TALRMAKILE 425 (466)
Q Consensus 416 na~~La~~L~ 425 (466)
+.+++.+.|+
T Consensus 310 ~~~~~~~~l~ 319 (396)
T PRK02627 310 VGEYLRAKLR 319 (396)
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 244
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.66 E-value=6.2e-15 Score=153.08 Aligned_cols=214 Identities=17% Similarity=0.128 Sum_probs=144.6
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh----ccCCC----EEEEcCCCccchHHHHHhhcc--c----
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVLP--K---- 272 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al----l~pGD----~VLv~~~~y~~t~~~~~~~l~--~---- 272 (466)
+.++...+|+++|+++.+.+.+++++||++|+..++... ..+|| +||+.++.|++........-. .
T Consensus 70 ~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 149 (389)
T PRK01278 70 YRIPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEG 149 (389)
T ss_pred cCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhccc
Confidence 457888999999999987788999999999999998765 45676 899999999875433211100 0
Q ss_pred C---CcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEeCCCCCCCc-cc--
Q 012321 273 M---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN-QK-- 342 (466)
Q Consensus 273 ~---gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~----dl~~I~ela~~~gillIvD~t~a~~~~-~~-- 342 (466)
+ .-.+..++..|++++++++++ ++++|++|.++|++|... ++++|.++|++||+++|+||+|..... ..
T Consensus 150 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 228 (389)
T PRK01278 150 FGPLVPGFDQVPFGDIEALKAAITP-NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF 228 (389)
T ss_pred CCCCCCCceEeCCCCHHHHHHhhCC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce
Confidence 0 011233445689999999987 499999998888888443 589999999999999999999763211 11
Q ss_pred ---hhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHH
Q 012321 343 ---ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTA 417 (466)
Q Consensus 343 ---pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~na 417 (466)
......|+ .+++|.+++ | ...|++++++++++.+.........+.++..+..++..++.+. ...++..++.
T Consensus 229 ~~~~~~~~pdi--~t~sK~l~~-G-~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~ 304 (389)
T PRK01278 229 AHEWAGVTPDI--MAVAKGIGG-G-FPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMG 304 (389)
T ss_pred eecccCCCCCE--EEEehhccC-C-cceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 11122454 478999984 3 4578888988888776543332223456666666655555442 1234444455
Q ss_pred HHHHHHHH
Q 012321 418 LRMAKILE 425 (466)
Q Consensus 418 ~~La~~L~ 425 (466)
+++.+.|+
T Consensus 305 ~~l~~~l~ 312 (389)
T PRK01278 305 LYLKQKLE 312 (389)
T ss_pred HHHHHHHH
Confidence 55555444
No 245
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.66 E-value=1.1e-14 Score=164.65 Aligned_cols=178 Identities=14% Similarity=0.078 Sum_probs=130.5
Q ss_pred CCccCCCCchhHHHHHHHHHhhhCC--Cc-EEEeC-CHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCc
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEGA--ES-TVIMA-SGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g~--e~-~v~~~-SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi 275 (466)
.|..++......+..++++++++|+ ++ .|+|+ ++++|+.+++..+ +++||+||++...|.+...+. ..+++.|+
T Consensus 69 ~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~-~~a~~~G~ 147 (805)
T PLN02724 69 QSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIR-EYALEKGA 147 (805)
T ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHH-HHHHHcCC
Confidence 3444555566788999999999997 33 45555 4569999998887 788999999988898866443 45566788
Q ss_pred EEEEeCCC-------------C--HHHHHHhcc---------CCCceEEEEeCCCCCCcccccHHHHHHHHHhc------
Q 012321 276 TATVIDPA-------------D--MEGLEAALN---------NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------ 325 (466)
Q Consensus 276 ~v~~vd~~-------------D--~e~Le~ai~---------~~~tklV~lesPsNPtG~v~dl~~I~ela~~~------ 325 (466)
++.+++.. + .++|++.++ ..++++|.+.+.+|.+|.++|++.|.++++..
T Consensus 148 ~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~ 227 (805)
T PLN02724 148 AAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSK 227 (805)
T ss_pred eEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhccccccc
Confidence 88877532 1 144555431 12478999999999999999999775555432
Q ss_pred --CCEEEEeCCCCCCCc-cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHH
Q 012321 326 --GAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR 381 (466)
Q Consensus 326 --gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~ 381 (466)
++++++|.+++.+.. .+.-++++|+++.|+||++++|.+ .|+++.++++++.+.
T Consensus 228 ~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G--~G~L~vr~~~~~~l~ 284 (805)
T PLN02724 228 SGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTG--LGALLVRRDAAKLLK 284 (805)
T ss_pred CcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCC--ceEEEEehhhhhhhc
Confidence 368999999876643 344467899999999999996653 588888887776654
No 246
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.65 E-value=4.5e-14 Score=150.82 Aligned_cols=214 Identities=17% Similarity=0.110 Sum_probs=140.3
Q ss_pred CchhHHHHHH----HHHhhhCCC-cEEEe----CCHHHHHHHHHHHhccCCCEEEEcCCCccchHH--HHHhh--cccCC
Q 012321 208 GNPTTVVVEE----KMSALEGAE-STVIM----ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRI--FIETV--LPKMG 274 (466)
Q Consensus 208 ~~p~~~~Lee----~lA~l~g~e-~~v~~----~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~--~~~~~--l~~~g 274 (466)
|+...+++|+ +..++++.+ ..+++ .||+.|+..++.++++|||+|+..+...++... ..... +...+
T Consensus 74 G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~ 153 (475)
T PLN03226 74 GNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATS 153 (475)
T ss_pred CChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccce
Confidence 4567777776 455667764 44445 899999999999999999999986644444221 11111 11112
Q ss_pred cEEE--Ee--C----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-----
Q 012321 275 ITAT--VI--D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (466)
Q Consensus 275 i~v~--~v--d----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~----- 341 (466)
+.+. .+ + ..|+++|++.+...++++|++ ..++ ++...|+++|.++|+++|++|++|+++..++..
T Consensus 154 ~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~-~~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~ 231 (475)
T PLN03226 154 IYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIA-GASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA 231 (475)
T ss_pred EEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEE-ecCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC
Confidence 2111 11 1 238999999887545787766 3333 688899999999999999999999998766542
Q ss_pred chhccCCcEEEeccccccccccCceEEEEEeChHHH-----------H---HHHHHH-HHhCCCchHHHHHHHHHhhHH-
Q 012321 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV-----------T---QIRNLH-HVLGGALNPNAAYLIIRGMKT- 405 (466)
Q Consensus 342 ~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli-----------~---~l~~~~-~~~G~~ls~~~A~l~lrgL~t- 405 (466)
.|+. ++|+++.|+||+|.|+. ||+++++++++ + .+.... ..+.+.+++...+.+..+++.
T Consensus 232 ~p~~-~~Div~~t~hK~L~GP~---Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i 307 (475)
T PLN03226 232 SPFE-YCDVVTTTTHKSLRGPR---GGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA 307 (475)
T ss_pred CCCC-CCeEEEecCcccccCCC---ceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH
Confidence 3343 69999999999998774 68888877544 1 111111 112233444333333333333
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHcC
Q 012321 406 ----LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 406 ----l~~R~e~~~~na~~La~~L~~~ 427 (466)
.+.+.++..+|+++|++.|++.
T Consensus 308 ~~~~~~~~~~~~~~na~~L~~~L~~~ 333 (475)
T PLN03226 308 MTPEFKAYQKQVKANAAALANRLMSK 333 (475)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHhC
Confidence 2446788899999999999884
No 247
>PRK07505 hypothetical protein; Provisional
Probab=99.64 E-value=4e-14 Score=147.85 Aligned_cols=186 Identities=20% Similarity=0.186 Sum_probs=130.5
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc----cCCC-EEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV----PAGG-HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all----~pGD-~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
+..+..++|+++|+++.+. +.++++||++|+..++..+. .+|+ .|++.+..|+++......... .+.++..++
T Consensus 88 ~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~~ 165 (402)
T PRK07505 88 VRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETID 165 (402)
T ss_pred hhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEeC
Confidence 4567889999999999988 89999999998887775432 2233 355666555554322222222 245777788
Q ss_pred CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC--------Cccchhc---cCCcE
Q 012321 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--------LNQKALS---LGADL 350 (466)
Q Consensus 282 ~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~--------~~~~pl~---~gaDi 350 (466)
..|+++++++++++ ++++++++|+||+|.+.++++|.++|+++|++||+||+++.. ....... ....+
T Consensus 166 ~~d~~~l~~~~~~~-~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i 244 (402)
T PRK07505 166 HNDLDALEDICKTN-KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTI 244 (402)
T ss_pred CCCHHHHHHHHhcC-CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeE
Confidence 88999999998764 789999999999999999999999999999999999997421 1111111 12247
Q ss_pred EEeccccccccccCceEEEEE-eChHHHHHHHHHHHH--hCCCchHHHHHHH
Q 012321 351 VLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHV--LGGALNPNAAYLI 399 (466)
Q Consensus 351 vv~S~sK~lgG~gdv~gG~vv-g~~eli~~l~~~~~~--~G~~ls~~~A~l~ 399 (466)
++.|++|.+++.| |+++ +++++++.++..... +++.+++..+..+
T Consensus 245 ~~~s~sK~~~~~G----g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~ 292 (402)
T PRK07505 245 IAASLGKAFGASG----GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAI 292 (402)
T ss_pred EEEechhhhhccC----eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHH
Confidence 7889999999763 6765 477888888764432 3334444443333
No 248
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.63 E-value=1.4e-14 Score=153.49 Aligned_cols=206 Identities=17% Similarity=0.175 Sum_probs=146.7
Q ss_pred HHHHHhhhCCCcEEE-eCCHHHHHHHHHHHhccC-------------------------------CCEEEEcCCCccchH
Q 012321 216 EEKMSALEGAESTVI-MASGMSASTVMLLALVPA-------------------------------GGHIVTTTDCYRKTR 263 (466)
Q Consensus 216 ee~lA~l~g~e~~v~-~~SG~aAi~~al~all~p-------------------------------GD~VLv~~~~y~~t~ 263 (466)
.++..+++|++.+-+ .-||+.|+..++.++++| ||+|+..+..+++..
T Consensus 101 ~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHl 180 (493)
T PRK13580 101 AEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHL 180 (493)
T ss_pred HHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCee
Confidence 566677889866444 569999999999999976 899999887776632
Q ss_pred HH------HHh--hcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 264 IF------IET--VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 264 ~~------~~~--~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
.. ... ....+|++-. -...|.+++++.++++ +++|++...+|. +...|+++|.++|+++|+++++|+++
T Consensus 181 thg~~~n~~~~~~~~~~y~vd~~-~g~iD~d~l~~~~~~~-~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH 257 (493)
T PRK13580 181 THGFRPNISGKMFHQRSYGVDPD-TGLLDYDEIAALAREF-KPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAH 257 (493)
T ss_pred ecCcccchhhheeeeEecccCcc-cCccCHHHHHHHHhhc-CCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECch
Confidence 11 000 0111222210 0135899999999886 667777788877 55789999999999999999999998
Q ss_pred CCCCcc--------chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-HHhCCCchHHHHHHHHH--hhH
Q 012321 336 ATPLNQ--------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGALNPNAAYLIIR--GMK 404 (466)
Q Consensus 336 a~~~~~--------~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-~~~G~~ls~~~A~l~lr--gL~ 404 (466)
..++.. .+. .++|+++.|+||+|.|+. ||++++++++++.+.... ..+|+.+.+..+..+.. -+.
T Consensus 258 ~~Gligg~~~~~~~~~~-~~~D~vtgT~hKaL~GP~---GG~I~~~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~ 333 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPV-PHADIVTTTTHKTLRGPR---GGLVLAKKEYADAVDKGCPLVLGGPLPHVMAAKAVALAEAR 333 (493)
T ss_pred hhceeccccchhhcCCC-CCCcEEEeCChhhccCCC---eEEEEecHHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHh
Confidence 776542 233 368999999999997763 799999999988885433 24566666654443332 111
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 405 --TLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 405 --tl~~R~e~~~~na~~La~~L~~~p 428 (466)
....+.++..+|++.|++.|.+..
T Consensus 334 ~~ef~~y~~~l~~Na~~La~~L~~~G 359 (493)
T PRK13580 334 TPEFQKYAQQVVDNARALAEGFLKRG 359 (493)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 224578889999999999998764
No 249
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.63 E-value=2.3e-14 Score=162.99 Aligned_cols=247 Identities=19% Similarity=0.195 Sum_probs=172.6
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHH----HHHHHHHHHhccC-CC----EEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSALEGAESTVIMASGM----SASTVMLLALVPA-GG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e~~v~~~SG~----aAi~~al~all~p-GD----~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
..+++++|++++|.+.+++.++.+ .|+.+++.+++++ || +||++...|+....-+. ..|+++.+++.
T Consensus 570 ~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~----~~G~~vv~v~~ 645 (993)
T PLN02414 570 FEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA----MCGMKIVVVGT 645 (993)
T ss_pred HHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH----HCCCEEEEecc
Confidence 468899999999998777776666 6899999999866 88 89999999998764432 35888888764
Q ss_pred -----CCHHHHHHhccC--CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC--ccchhccCCcEEEe
Q 012321 283 -----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVLH 353 (466)
Q Consensus 283 -----~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~--~~~pl~~gaDivv~ 353 (466)
.|+++|++++++ .+|++|++.+|+|.+|...|+++|+++||++|+++++|.++..+. ...|.++|+|+++.
T Consensus 646 d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~ 725 (993)
T PLN02414 646 DAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHL 725 (993)
T ss_pred CCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEe
Confidence 489999999985 248999999999999999999999999999999999999975543 35677899999999
Q ss_pred cccccccccc---CceEEEEEeChHHHHHHHHH------------H-HHhCCCc-hHH-------H--HHHHHHhhHHHH
Q 012321 354 SATKFIGGHN---DVLAGSISGSGKLVTQIRNL------------H-HVLGGAL-NPN-------A--AYLIIRGMKTLH 407 (466)
Q Consensus 354 S~sK~lgG~g---dv~gG~vvg~~eli~~l~~~------------~-~~~G~~l-s~~-------~--A~l~lrgL~tl~ 407 (466)
|.||+|++|- .-..|++..++++...+-.. . ...|..- .++ . +|+..-|.+.+.
T Consensus 726 s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~ 805 (993)
T PLN02414 726 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLT 805 (993)
T ss_pred cCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHH
Confidence 9999877442 11258888887665443211 1 0122211 111 1 223333444454
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcEEE------------eCCCCCC---CcchHHHHhhc-CCc-ceEEEEEe
Q 012321 408 LRVQQQNSTALRMAKILEAHPKVKRV------------HYPGLKS---HPEHHIATQQM-TGF-GGVVSFEV 462 (466)
Q Consensus 408 ~R~e~~~~na~~La~~L~~~p~V~~V------------~~PgL~s---~p~~~l~~~~~-~g~-Ggl~sfel 462 (466)
.--++...|+.++++.|++...+... ..+.++. -+..+++++.+ .|+ ++.++|..
T Consensus 806 ~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~~pv 877 (993)
T PLN02414 806 DASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMSWPV 877 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeecccc
Confidence 44556677899999999876443221 1112221 12256888877 343 56666543
No 250
>PLN02271 serine hydroxymethyltransferase
Probab=99.62 E-value=4.2e-14 Score=150.97 Aligned_cols=222 Identities=20% Similarity=0.169 Sum_probs=150.7
Q ss_pred CCccCCC--CchhHHHH----HHHHHhhhCCCc-----EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHH--
Q 012321 201 SFEYGRY--GNPTTVVV----EEKMSALEGAES-----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-- 267 (466)
Q Consensus 201 ~~~Y~R~--~~p~~~~L----ee~lA~l~g~e~-----~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~-- 267 (466)
+|.-.|| ++...+++ .++..+++|.+. .|---||+.|+.+++.++++|||+|+..+..|++......
T Consensus 179 G~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~ 258 (586)
T PLN02271 179 GMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYT 258 (586)
T ss_pred CCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhccccc
Confidence 3433444 44544544 455666788543 3445599999999999999999999999999998543221
Q ss_pred ---hhcccCCcEEEEe----C----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 268 ---TVLPKMGITATVI----D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 268 ---~~l~~~gi~v~~v----d----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
......|+.+..+ + ..|.+++++.....++|+|++....+| ...|+++|.++|+++|++|++|.++.
T Consensus 259 ~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~ 336 (586)
T PLN02271 259 PGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHI 336 (586)
T ss_pred ccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECccc
Confidence 1122335443332 2 248999998444446999999777777 77899999999999999999999987
Q ss_pred CCCc-----cchhccCCcEEEeccccccccccCceEEEEEeChH--------------------HHHHHHHHHH--HhCC
Q 012321 337 TPLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------------------LVTQIRNLHH--VLGG 389 (466)
Q Consensus 337 ~~~~-----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~e--------------------li~~l~~~~~--~~G~ 389 (466)
.++. ..|+. ++|+++.|+||+|.||. ||+++.+++ +.+++..... ..|+
T Consensus 337 aGLIa~g~~~sP~~-~aDvvt~TTHKtLrGPr---GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgG 412 (586)
T PLN02271 337 SGLVAAKECVNPFD-YCDIVTSTTHKSLRGPR---GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGG 412 (586)
T ss_pred ccccccCcCCCCCc-CCcEEEeCCcccCCCCC---ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccC
Confidence 6543 34555 59999999999999995 677776653 3344433221 1222
Q ss_pred CchHHHHHHH--HH--hhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 390 ALNPNAAYLI--IR--GMKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 390 ~ls~~~A~l~--lr--gL~tl~~R~e~~~~na~~La~~L~~~p 428 (466)
......|.++ +. ....+....++..+|++.|++.|.+..
T Consensus 413 phn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G 455 (586)
T PLN02271 413 PHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRK 455 (586)
T ss_pred hhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 2222122211 22 223457788899999999999998874
No 251
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.62 E-value=1e-13 Score=143.17 Aligned_cols=216 Identities=18% Similarity=0.155 Sum_probs=145.9
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc-cCC-CEEEEcCCCccchH-HHHHhhcc-c----C---C
Q 012321 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-PAG-GHIVTTTDCYRKTR-IFIETVLP-K----M---G 274 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all-~pG-D~VLv~~~~y~~t~-~~~~~~l~-~----~---g 274 (466)
.+.++...+|.+++++..+.+.+++++||++|+..++.... .+| ++|++.++.|++.. ..+...-. . + .
T Consensus 67 ~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~ 146 (377)
T PRK02936 67 LFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLL 146 (377)
T ss_pred ccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCC
Confidence 34567788888888888777788999999999999987532 244 67888888887632 22211000 0 0 0
Q ss_pred cEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEeCCCCCCCc-cchh---cc
Q 012321 275 ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN-QKAL---SL 346 (466)
Q Consensus 275 i~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~----dl~~I~ela~~~gillIvD~t~a~~~~-~~pl---~~ 346 (466)
..+..++..|++++++.++++ +++|++|.+.++.|... .+++|.++|++||+++|+||+|..... ..+. ..
T Consensus 147 ~~~~~~~~~d~~~l~~~~~~~-~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~ 225 (377)
T PRK02936 147 PGFTHVPFNDIKALKEVMNEE-VAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQF 225 (377)
T ss_pred CCceEeCCCCHHHHHHhccCC-eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhh
Confidence 123445566899999999864 99999999999888764 289999999999999999999853111 1111 12
Q ss_pred C--CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHH
Q 012321 347 G--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAK 422 (466)
Q Consensus 347 g--aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl--~~R~e~~~~na~~La~ 422 (466)
+ .|++ +++|.+++ | ..+|++++++++++.+...........++..+..++..++.+ ...+++..++.+.+.+
T Consensus 226 ~~~~di~--t~sK~l~~-G-~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~ 301 (377)
T PRK02936 226 GLDPDIV--TVAKGLGN-G-IPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQ 301 (377)
T ss_pred CCCCcEE--EEcccccC-C-CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 2 4654 68999994 4 457899999998887754322222234666666555555554 2345666677777777
Q ss_pred HHHc
Q 012321 423 ILEA 426 (466)
Q Consensus 423 ~L~~ 426 (466)
.|++
T Consensus 302 ~L~~ 305 (377)
T PRK02936 302 KLQE 305 (377)
T ss_pred HHHH
Confidence 6665
No 252
>PRK15029 arginine decarboxylase; Provisional
Probab=99.59 E-value=6.7e-14 Score=155.37 Aligned_cols=211 Identities=14% Similarity=0.111 Sum_probs=150.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
+.....+.++..|+++|++.+.++++|+ .+|.+++++++++||+||+++++|.+.+..+ ...|+...++.+
T Consensus 203 p~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al----~L~ga~Pvyl~P~~~~ 278 (755)
T PRK15029 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGL----ILTGAKPVYMVPSRNR 278 (755)
T ss_pred CCcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHH----HHcCCeEEEecccccc
Confidence 4455788999999999999999999998 8899999999999999999999999876543 334555555531
Q ss_pred ------CC-----HHHHHHhccCC-Cce--------EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC---
Q 012321 283 ------AD-----MEGLEAALNNN-NVS--------LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--- 339 (466)
Q Consensus 283 ------~D-----~e~Le~ai~~~-~tk--------lV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~--- 339 (466)
.+ ++.|+++|+++ .++ ++++.+|+ ..|.+.|+++|+++||++|++|++||+|+...
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~ 357 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFN 357 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhcCCeEEEECccccccccC
Confidence 23 88899888543 134 89998887 68999999999999999999999999976532
Q ss_pred ---cc-chh-----c-cCCc-EEEeccccccccccCceEEEEEeChH--HH--HHHHHHHHHhCCCchHHHHHHHHHhhH
Q 012321 340 ---NQ-KAL-----S-LGAD-LVLHSATKFIGGHNDVLAGSISGSGK--LV--TQIRNLHHVLGGALNPNAAYLIIRGMK 404 (466)
Q Consensus 340 ---~~-~pl-----~-~gaD-ivv~S~sK~lgG~gdv~gG~vvg~~e--li--~~l~~~~~~~G~~ls~~~A~l~lrgL~ 404 (466)
.. .++ . .|+| ++++|.||.+++.. .+.++..+.. .+ ++++.....+.++.+. |+++..|+
T Consensus 358 ~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alT--QaS~LHv~~~~~~id~~r~~~~l~~~qSTSPS---Y~LmASLD 432 (755)
T PRK15029 358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATTSPL---YAICASND 432 (755)
T ss_pred ccccccccccccccccCCCceEEEEchhhcccchh--hhhhheeCCCccccCHHHHHHHHHHHcCCCcH---HHHHHHHH
Confidence 11 333 3 6898 99999999999876 5666655332 22 4666666655544222 22222222
Q ss_pred H---------HHHHHHHHHHHHHHHHHHHHcCC
Q 012321 405 T---------LHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 405 t---------l~~R~e~~~~na~~La~~L~~~p 428 (466)
. -...+++..+.+..+.+.|++.+
T Consensus 433 ~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 433 VAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 1 12224445556666777776554
No 253
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.59 E-value=3.4e-13 Score=140.93 Aligned_cols=223 Identities=13% Similarity=0.114 Sum_probs=145.8
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCccchHH-HHHhhc-------
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRI-FIETVL------- 270 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all--------~pGD~VLv~~~~y~~t~~-~~~~~l------- 270 (466)
+.++...+|+++|+++.+.+.+++++||++|+..++.... ...++||..+..|++... .+...-
T Consensus 74 ~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~ 153 (397)
T TIGR03246 74 YTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQG 153 (397)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccC
Confidence 4577889999999999988899999999999999987652 123567877777776432 221110
Q ss_pred -ccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEeCCCCCCC-----c
Q 012321 271 -PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPL-----N 340 (466)
Q Consensus 271 -~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~----dl~~I~ela~~~gillIvD~t~a~~~-----~ 340 (466)
....-.+..++..|++++++.+.++ +++|++|.++++.|.+. .+++|.++|++||+++|+||++. ++ .
T Consensus 154 ~~~~~~~~~~~~~~d~~~l~~~l~~~-~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~Gr~G~~ 231 (397)
T TIGR03246 154 FAPLPGGIKHAPYNDLAAAKALISDK-TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQT-GVGRTGEL 231 (397)
T ss_pred CCCCCCceEEeCCCCHHHHHHHhccC-eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-cCCccccc
Confidence 0111234456677999999999764 99999997666667543 38999999999999999999972 22 1
Q ss_pred c--chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHHHHHHHHH
Q 012321 341 Q--KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQQQNST 416 (466)
Q Consensus 341 ~--~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl--~~R~e~~~~n 416 (466)
. .......|++ +++|.+++ | ...|++++++++++.++..........+|..+..++..++.+ +..+++..++
T Consensus 232 ~a~~~~gv~pDi~--t~~K~lgg-G-~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~ 307 (397)
T TIGR03246 232 YAYMHYGVTPDIL--TSAKALGG-G-FPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQR 307 (397)
T ss_pred hhhhhcCCCCCEE--EeehhhhC-C-cceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 1 1112234665 68999975 3 457888899988887753222111123444444444444333 2345666677
Q ss_pred HHHHHHHHHcC----CCcEEEeC
Q 012321 417 ALRMAKILEAH----PKVKRVHY 435 (466)
Q Consensus 417 a~~La~~L~~~----p~V~~V~~ 435 (466)
.+++.+.|++. +.+..|..
T Consensus 308 ~~~l~~~L~~l~~~~~~~~~vrg 330 (397)
T TIGR03246 308 HDLFVDGLEKINARYNVFSEIRG 330 (397)
T ss_pred HHHHHHHHHHHHhcCCCeEeeec
Confidence 77777777653 33444443
No 254
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.59 E-value=1.3e-13 Score=144.19 Aligned_cols=216 Identities=13% Similarity=0.170 Sum_probs=146.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCccchHH-HHH--------hhc
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRI-FIE--------TVL 270 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all--------~pGD~VLv~~~~y~~t~~-~~~--------~~l 270 (466)
.++...+|+++|+++.+.+.+++++||++|+..++.... ...++|+..+..|++... .+. ..+
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~ 159 (403)
T PRK05093 80 TNEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGF 159 (403)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcC
Confidence 456678999999999887899999999999998887442 123567777777776432 111 001
Q ss_pred ccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc--c---HHHHHHHHHhcCCEEEEeCCCCCCCc-cchh
Q 012321 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV--D---VKLVSDLCHKKGAIVCIDGTFATPLN-QKAL 344 (466)
Q Consensus 271 ~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~--d---l~~I~ela~~~gillIvD~t~a~~~~-~~pl 344 (466)
......+..++..|++++++.+.++ +++|++| |.||+|.+. + +++|.++|++||+++|+||+|..... ..+.
T Consensus 160 ~~~~~~~~~~~~~d~~~l~~~l~~~-~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 237 (403)
T PRK05093 160 GPKPADITHVPFNDLAAVKAVIDDH-TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF 237 (403)
T ss_pred CCCCCCcEEeCCCCHHHHHHHhcCC-eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch
Confidence 1112245566777999999999764 9999998 777776554 2 89999999999999999999763211 1111
Q ss_pred ---ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHHHH
Q 012321 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALR 419 (466)
Q Consensus 345 ---~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~ 419 (466)
..+.+.-+.|++|.+++ | .+.|++++++++++.+...........++..++.++..|+.+. ...++..++.+.
T Consensus 238 ~~~~~~~~pdi~s~sK~l~~-G-~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~ 315 (403)
T PRK05093 238 AYMHYGVTPDILTSAKALGG-G-FPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQR 315 (403)
T ss_pred hhhhcCCCCCEEEecccccC-C-cceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 12222224588999994 4 4689999999998887643222222345665655555454432 345666777888
Q ss_pred HHHHHHcC
Q 012321 420 MAKILEAH 427 (466)
Q Consensus 420 La~~L~~~ 427 (466)
+.+.|++.
T Consensus 316 l~~~L~~~ 323 (403)
T PRK05093 316 FVDGLQKI 323 (403)
T ss_pred HHHHHHHH
Confidence 88888764
No 255
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.58 E-value=5.1e-13 Score=139.47 Aligned_cols=216 Identities=20% Similarity=0.192 Sum_probs=147.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc---------cC-CCEEEEcCCCccch-HHHHHhhc-----c
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PA-GGHIVTTTDCYRKT-RIFIETVL-----P 271 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all---------~p-GD~VLv~~~~y~~t-~~~~~~~l-----~ 271 (466)
..+...+|+++|+++.|.+.+++++||++|+..++.... .+ .++|+.....|++. ...+...- .
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~ 156 (401)
T TIGR01885 77 YNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRT 156 (401)
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccc
Confidence 567789999999999998899999999999999988642 13 35777788887763 33222110 0
Q ss_pred cCC---cEEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc--
Q 012321 272 KMG---ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-- 340 (466)
Q Consensus 272 ~~g---i~v~~vd~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~~-- 340 (466)
.++ ..+..++..|+++|++.++. .++.+|++|.+.+++|.+.+ +++|.++|++||+++|+||++.. +.
T Consensus 157 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g-~g~~ 235 (401)
T TIGR01885 157 NFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTG-LGRT 235 (401)
T ss_pred ccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC-CCcc
Confidence 112 12344566688999988852 24789999999999999886 99999999999999999999732 21
Q ss_pred cch-----hccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHH--HHHHH
Q 012321 341 QKA-----LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQ 413 (466)
Q Consensus 341 ~~p-----l~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~~--R~e~~ 413 (466)
... .....|+++ ++|.+++++. ..|++++++++++.++..........++..+..++..|+.+.. ..++.
T Consensus 236 G~~~~~~~~~~~~di~~--~gK~l~~g~~-~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~ 312 (401)
T TIGR01885 236 GKLLCVDHENVKPDIVL--LGKALSGGVY-PVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENA 312 (401)
T ss_pred chhhHHhhcCCCCCEEE--eeccccCCCC-CcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHH
Confidence 111 223467775 5699987543 3578888888888775422211112245555555555555432 33556
Q ss_pred HHHHHHHHHHHHcC
Q 012321 414 NSTALRMAKILEAH 427 (466)
Q Consensus 414 ~~na~~La~~L~~~ 427 (466)
.+....+.+.|+++
T Consensus 313 ~~~~~~~~~~L~~l 326 (401)
T TIGR01885 313 EKLGEIFRDQLKKL 326 (401)
T ss_pred HHHHHHHHHHHHhc
Confidence 66677888888876
No 256
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.57 E-value=3.5e-13 Score=141.60 Aligned_cols=215 Identities=19% Similarity=0.243 Sum_probs=148.5
Q ss_pred CCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHH-HHhhcccCCcEE-E
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF-IETVLPKMGITA-T 278 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~-~~~~l~~~gi~v-~ 278 (466)
+-.|+ ++|+..+||+.+++++|.+.++.++||++|+.+++...+++||.| +...|..+... + ...|... .
T Consensus 71 Dd~Ya--gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI----~~~Ga~fvD 142 (460)
T PRK13237 71 DEAYA--GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQ----ELNGGIFVD 142 (460)
T ss_pred chhhc--CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHH----HhCCcEEEe
Confidence 34566 789999999999999999999999999999998766668999965 55545544322 2 1223221 1
Q ss_pred Ee-------------C-CCCHHHHHHhccCC---CceEEEEeCCCCCC-cccc---cHHHHHHHHHhcCCEEEEeCCCCC
Q 012321 279 VI-------------D-PADMEGLEAALNNN---NVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 279 ~v-------------d-~~D~e~Le~ai~~~---~tklV~lesPsNPt-G~v~---dl~~I~ela~~~gillIvD~t~a~ 337 (466)
.+ + ..|+++|+++|+++ ++++|.++.++|.. |... ++++|.++|++||+.||.|.+...
T Consensus 143 i~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~ 222 (460)
T PRK13237 143 IIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCV 222 (460)
T ss_pred eecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchh
Confidence 11 1 24899999999753 35678888899988 5665 689999999999999999998543
Q ss_pred C-----------Cccchh-------ccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHh-C----CCchH
Q 012321 338 P-----------LNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL-G----GALNP 393 (466)
Q Consensus 338 ~-----------~~~~pl-------~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~-G----~~ls~ 393 (466)
+ +..++. ...+|+++.|++|.+..+ .||+++.+ ++++++++.+...+ | +.++.
T Consensus 223 gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~---~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~g 299 (460)
T PRK13237 223 ENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN---IGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAG 299 (460)
T ss_pred cChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC---CceEEEECCHHHHHHHHHhccccCCCcCCCChhh
Confidence 2 222332 124799999999999886 37887764 67888888775443 2 22322
Q ss_pred -HHHHHHHHhhH-HHH-HHHHHHHHHHHHHHHHHHcC
Q 012321 394 -NAAYLIIRGMK-TLH-LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 394 -~~A~l~lrgL~-tl~-~R~e~~~~na~~La~~L~~~ 427 (466)
..+.++ .|++ .++ ..+++..+++++|++.|.+.
T Consensus 300 rd~~alA-vgl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 300 RDMEAMA-IGIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred hHHHHHH-hHHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 222222 2222 222 45556667888999999875
No 257
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.56 E-value=8.3e-14 Score=144.63 Aligned_cols=208 Identities=22% Similarity=0.242 Sum_probs=133.6
Q ss_pred HHHHHHhhhCCC----cEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhh-ccc-----CCcEEEE--eC
Q 012321 215 VEEKMSALEGAE----STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV-LPK-----MGITATV--ID 281 (466)
Q Consensus 215 Lee~lA~l~g~e----~~v~-~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~-l~~-----~gi~v~~--vd 281 (466)
.++++.++++++ .+-+ .-||+.|+.+++.+|++|||+|+..+..+++....-... .++ ...++.. +|
T Consensus 71 a~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d 150 (399)
T PF00464_consen 71 AIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVD 150 (399)
T ss_dssp HHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-
T ss_pred HHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeee
Confidence 366777889987 4443 579999999999999999999999998887632110000 000 0112222 23
Q ss_pred ----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC-----CCCCccchhccCCcEEE
Q 012321 282 ----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-----ATPLNQKALSLGADLVL 352 (466)
Q Consensus 282 ----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~-----a~~~~~~pl~~gaDivv 352 (466)
..|.+++++.+.+.++|+|++..-+ .....|++++.++|++.|++|++|.++ +.+...+|+.. +|++.
T Consensus 151 ~~~~~ID~d~l~~~a~~~kPklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvvt 227 (399)
T PF00464_consen 151 PDTGLIDYDELEKLAKEHKPKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVVT 227 (399)
T ss_dssp TTTSSB-HHHHHHHHHHH--SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEEE
T ss_pred cCCCeECHHHHHHHHhhcCCCEEEECchh--ccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-ceEEE
Confidence 3489999998877679999985444 456689999999999999999999996 34677899987 99999
Q ss_pred eccccccccccCceEEEEEeC--------------hHHHHHHHHHHHHh--CC-CchHHHHHH--HHHhh-HHHHHHHHH
Q 012321 353 HSATKFIGGHNDVLAGSISGS--------------GKLVTQIRNLHHVL--GG-ALNPNAAYL--IIRGM-KTLHLRVQQ 412 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~--------------~eli~~l~~~~~~~--G~-~ls~~~A~l--~lrgL-~tl~~R~e~ 412 (466)
.|+||+|.||. +|+|+++ +++.++|.+..... |+ .+....+.. +...+ .......++
T Consensus 228 ~sThKtl~GPr---ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~q 304 (399)
T PF00464_consen 228 GSTHKTLRGPR---GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQ 304 (399)
T ss_dssp EESSGGG-SSS----EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred eeccccccccC---ceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHH
Confidence 99999999994 8999999 67888887654322 22 122222221 12222 235678889
Q ss_pred HHHHHHHHHHHHHcCC
Q 012321 413 QNSTALRMAKILEAHP 428 (466)
Q Consensus 413 ~~~na~~La~~L~~~p 428 (466)
..+|++.|++.|.+..
T Consensus 305 Vv~NAk~La~~L~~~G 320 (399)
T PF00464_consen 305 VVKNAKALAEALQERG 320 (399)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhCC
Confidence 9999999999999975
No 258
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.55 E-value=1.3e-13 Score=139.20 Aligned_cols=212 Identities=19% Similarity=0.236 Sum_probs=158.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~ 285 (466)
.+....+||+.||+|.+.+.+++|+|.--|+...|..|. -||-+|......|.+.. .-.+..+++-..+...|+
T Consensus 214 ~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI----~GIrns~v~K~IFrHND~ 289 (570)
T KOG1360|consen 214 HSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMI----QGIRNSRVPKHIFRHNDL 289 (570)
T ss_pred CCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHH----HHhhhcCCcceeeccCCH
Confidence 356688999999999999999999999988888887764 47877776666665533 223445666556677888
Q ss_pred HHHHHhccCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc--------c-hhccCCcEEEe
Q 012321 286 EGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--------K-ALSLGADLVLH 353 (466)
Q Consensus 286 e~Le~ai~~~---~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~--------~-pl~~gaDivv~ 353 (466)
+.|++.++.. .+|+|-+|+.++..|.+.|+++|++++|+||++..+||+++.++.. + ..-...||+..
T Consensus 290 ~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsG 369 (570)
T KOG1360|consen 290 DHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISG 369 (570)
T ss_pred HHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhccc
Confidence 8888888642 3799999999999999999999999999999999999997655431 1 12234699999
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHH---HhhHHH--HHHHHHHHHHHHHHHHHHHc
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLII---RGMKTL--HLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~l---rgL~tl--~~R~e~~~~na~~La~~L~~ 426 (466)
++.|.||- +||+|.+...+++.+|.+.. ++...++|..-.-++ +.|+.- ....+++++|.+++.+.|.+
T Consensus 370 TLgKafGc----VGGYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~ 445 (570)
T KOG1360|consen 370 TLGKAFGC----VGGYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLME 445 (570)
T ss_pred chhhhccc----ccceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999985 47999999999999998765 344566665333223 333332 12234567788888888876
Q ss_pred C
Q 012321 427 H 427 (466)
Q Consensus 427 ~ 427 (466)
.
T Consensus 446 ~ 446 (570)
T KOG1360|consen 446 L 446 (570)
T ss_pred c
Confidence 4
No 259
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.55 E-value=8.9e-13 Score=138.14 Aligned_cols=216 Identities=14% Similarity=0.146 Sum_probs=144.5
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCccchHHHHHhhcc-c----
Q 012321 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVLP-K---- 272 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all--------~pGD~VLv~~~~y~~t~~~~~~~l~-~---- 272 (466)
.+.++...+|+++|+++.+.+.+++++||++|+..++.... ...++|+..+..|++.......+-. .
T Consensus 77 ~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 156 (406)
T PRK12381 77 GYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQ 156 (406)
T ss_pred ccCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCccccc
Confidence 34577788999999999888889999999999999887642 1346788888888874422211100 0
Q ss_pred -C---CcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc-----cHHHHHHHHHhcCCEEEEeCCCCCC-Cccc
Q 012321 273 -M---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATP-LNQK 342 (466)
Q Consensus 273 -~---gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~-----dl~~I~ela~~~gillIvD~t~a~~-~~~~ 342 (466)
+ .-.+..++..|++++++.+++ ++++|++| |.|++|-+. .+++|.++|++||+++|+||++... ....
T Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~ 234 (406)
T PRK12381 157 DFAPLPPDIRHAAYNDLNSASALIDD-QTCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE 234 (406)
T ss_pred CCCCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcc
Confidence 0 012344556789999999976 48999996 888887643 3789999999999999999997321 1111
Q ss_pred h-----hccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHH
Q 012321 343 A-----LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (466)
Q Consensus 343 p-----l~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~ 415 (466)
. .....|+ .+++|.+++ | ...|++++++++++.+...........++..+..++..++.+. ..+++..+
T Consensus 235 ~~~~~~~~v~pDi--~t~sK~l~g-G-~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~ 310 (406)
T PRK12381 235 LYAYMHYGVTPDV--LTTAKALGG-G-FPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQ 310 (406)
T ss_pred hhhhHhhCCCCCE--EEehhhhhC-C-CceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 1 1223455 588999985 3 4678888999998877543222212345665555554444442 24566666
Q ss_pred HHHHHHHHHHcC
Q 012321 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+.+.+.+.|++.
T Consensus 311 ~~~~l~~~L~~l 322 (406)
T PRK12381 311 RHDWFVERLNTI 322 (406)
T ss_pred HHHHHHHHHHHH
Confidence 777777777653
No 260
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.55 E-value=1.8e-13 Score=138.76 Aligned_cols=221 Identities=22% Similarity=0.252 Sum_probs=156.1
Q ss_pred CCccCCC--CchhHHHH----HHHHHhhhCCCcEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccC
Q 012321 201 SFEYGRY--GNPTTVVV----EEKMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 201 ~~~Y~R~--~~p~~~~L----ee~lA~l~g~e~~v~-~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~ 273 (466)
+|..-|| +...++.+ .++..+++|++.+=+ -.||+.|+.+++.++++|||+|+-.+-.+++....-.. ....
T Consensus 57 GyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~~-v~~s 135 (413)
T COG0112 57 GYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSP-VNFS 135 (413)
T ss_pred CCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCCC-CCcc
Confidence 4544444 44555544 456677899876544 46999999999999999999999999888874321100 0111
Q ss_pred Cc--EEEE--eC----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC-----CCCCc
Q 012321 274 GI--TATV--ID----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-----ATPLN 340 (466)
Q Consensus 274 gi--~v~~--vd----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~-----a~~~~ 340 (466)
|. ++.. +| ..|.|++++.+.+.++|+|+.-. +-.-+..|++++.++|++.|++|++|-++ +.+..
T Consensus 136 G~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~--SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~ 213 (413)
T COG0112 136 GKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGG--SAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVH 213 (413)
T ss_pred ceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECc--cccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccC
Confidence 11 1111 12 34899999988887899999733 33567789999999999999999999995 45677
Q ss_pred cchhccCCcEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHH--HhCCCc-hHHHHH--HHHHhhH-HHHHHHHHH
Q 012321 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHH--VLGGAL-NPNAAY--LIIRGMK-TLHLRVQQQ 413 (466)
Q Consensus 341 ~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~--~~G~~l-s~~~A~--l~lrgL~-tl~~R~e~~ 413 (466)
++|+.+ +|+|+.|.||+|.|| +||+|++++ ++.+++.+... ..|+.+ .-.++. .+...++ .++...++.
T Consensus 214 p~P~~~-AdvVTtTTHKTlrGP---rGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qV 289 (413)
T COG0112 214 PNPLPH-ADVVTTTTHKTLRGP---RGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQV 289 (413)
T ss_pred CCCCCc-cceEeCCcccCCCCC---CceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 899998 999999999999999 599999985 78888876432 122222 112211 1122222 346677888
Q ss_pred HHHHHHHHHHHHcCC
Q 012321 414 NSTALRMAKILEAHP 428 (466)
Q Consensus 414 ~~na~~La~~L~~~p 428 (466)
.+|++.|++.|.++.
T Consensus 290 v~NAkaLAe~l~~~G 304 (413)
T COG0112 290 VKNAKALAEALKERG 304 (413)
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999999854
No 261
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.54 E-value=1.3e-12 Score=137.24 Aligned_cols=223 Identities=16% Similarity=0.194 Sum_probs=142.4
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhh-------c------
Q 012321 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV-------L------ 270 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~-------l------ 270 (466)
+.++...+|.++|+++... +.+++++||++|+..+++... ...++||..++.|++....+... .
T Consensus 85 ~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~ 164 (423)
T TIGR00713 85 APTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSP 164 (423)
T ss_pred CCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCC
Confidence 3566788999999998764 678888999999999887532 35689999999998853221110 0
Q ss_pred ---ccCCcEEEEeCCCCHHHHHHhccC--CCceEEEEe-CCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc
Q 012321 271 ---PKMGITATVIDPADMEGLEAALNN--NNVSLFFTE-SPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN 340 (466)
Q Consensus 271 ---~~~gi~v~~vd~~D~e~Le~ai~~--~~tklV~le-sPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~~ 340 (466)
...+..+..++..|++++++.+++ .++++|++| .|+| +|.+.+ +++|.++|++||+++|+||+|.....
T Consensus 165 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~ 243 (423)
T TIGR00713 165 GVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV 243 (423)
T ss_pred CCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc
Confidence 000111233445689999998862 248999998 6777 787765 78999999999999999999853211
Q ss_pred -----cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH---HHhCCCchHHHHHHHHHhhHHHHH--HH
Q 012321 341 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTLHL--RV 410 (466)
Q Consensus 341 -----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~---~~~G~~ls~~~A~l~lrgL~tl~~--R~ 410 (466)
........|++ +++|.+++ | ..+|++++++++++.+.... .......++..+..++..++.+.. .+
T Consensus 244 g~~~~~~~~~~~pDi~--t~sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~ 319 (423)
T TIGR00713 244 ALGGAQEYFGVEPDLT--TLGKIIGG-G-LPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVY 319 (423)
T ss_pred CcchhHHHhCCCcchh--hhhhhhcC-C-CceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHH
Confidence 11122234654 69999984 4 46799999999988876321 111123456555554444444332 22
Q ss_pred HHHHH----HHHHHHHHHHcCCCcEEEe
Q 012321 411 QQQNS----TALRMAKILEAHPKVKRVH 434 (466)
Q Consensus 411 e~~~~----na~~La~~L~~~p~V~~V~ 434 (466)
++..+ ..+.|.+.+++++.+..|.
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~ 347 (423)
T TIGR00713 320 TELDELAKRLAEGLSEVLEDTGIPHTVN 347 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 33333 3334455566676555444
No 262
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.53 E-value=2.9e-13 Score=149.19 Aligned_cols=175 Identities=15% Similarity=0.153 Sum_probs=131.3
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC------
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID------ 281 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd------ 281 (466)
.-...+.++..|+++|++...++.+|+ .++.+++++++.+||.||+++++|.+.+.. .+...|+...++.
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hg---aLiLsGa~PVYl~P~~n~~ 249 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHG---ALIQAGATPVYLETARNPF 249 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHH---HHHHcCCeEEEeecccccc
Confidence 345788899999999999999999998 899999999999999999999999987642 1223355555542
Q ss_pred ----CCC-----HHHHHHhccCC--------C-ceEEEEeCCCCCCcccccHHHHHHH-HHhcCCEEEEeCCCCCCCccc
Q 012321 282 ----PAD-----MEGLEAALNNN--------N-VSLFFTESPTNPFLRCVDVKLVSDL-CHKKGAIVCIDGTFATPLNQK 342 (466)
Q Consensus 282 ----~~D-----~e~Le~ai~~~--------~-tklV~lesPsNPtG~v~dl~~I~el-a~~~gillIvD~t~a~~~~~~ 342 (466)
..+ .+.|+++|+++ + .+++++.+|+ ..|.+.|++.|+++ +|.++ +|++||+|+....+.
T Consensus 250 Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~ 327 (720)
T PRK13578 250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFI 327 (720)
T ss_pred CCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEEeCcchhhhccC
Confidence 123 45588887653 1 5899998887 68999999999999 68888 999999987543222
Q ss_pred ---------hhccCCc----EEEeccccccccccCceEEEEEeChHHH---------HHHHHHHHHhCCC
Q 012321 343 ---------ALSLGAD----LVLHSATKFIGGHNDVLAGSISGSGKLV---------TQIRNLHHVLGGA 390 (466)
Q Consensus 343 ---------pl~~gaD----ivv~S~sK~lgG~gdv~gG~vvg~~eli---------~~l~~~~~~~G~~ 390 (466)
.++.|+| ++++|.||.+++.+ .+.++..+...+ ++++.....+.++
T Consensus 328 p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alT--QaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qST 395 (720)
T PRK13578 328 PMMADCSPLLLELNENDPGIFVTQSVHKQQAGFS--QTSQIHKKDNHIKGQARYCPHKRLNNAFMLHAST 395 (720)
T ss_pred cccccCChhhhhcCCCCCCeEEEEChhhcchhhh--hHhhhhcCCcccccccccCCHHHHHHHHHHHcCC
Confidence 2567999 99999999999876 566665544332 4566555555443
No 263
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.53 E-value=5.3e-13 Score=150.45 Aligned_cols=246 Identities=16% Similarity=0.165 Sum_probs=166.2
Q ss_pred hHHHHHHHHHhhhCCCcEEEeCC-HHHHHHHHHHHhcc--------CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 211 TTVVVEEKMSALEGAESTVIMAS-GMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~e~~v~~~S-G~aAi~~al~all~--------pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
...+++++|+++.|.+.+-++.+ |+.+..+.++++.. ..+.|+++...|+..... +...|++++.++
T Consensus 531 ~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPas----a~~~G~~Vv~V~ 606 (939)
T TIGR00461 531 LIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPAS----AAMAGMQVVPVN 606 (939)
T ss_pred HHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHH----HHHCCCEEEEec
Confidence 35678999999999986555554 44665555544432 235799999999776533 445588887776
Q ss_pred C-----CCHHHHHHhccC--CCceEEEEeCCCCCCccccc-HHHHHHHHHhcCCEEEEeCCCCC--CCccchhccCCcEE
Q 012321 282 P-----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLV 351 (466)
Q Consensus 282 ~-----~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d-l~~I~ela~~~gillIvD~t~a~--~~~~~pl~~gaDiv 351 (466)
. .|+++|++++++ .++++|++.+|+| +|.+.| +++|+++||++|.++++|.++.. ....+|.++|+|++
T Consensus 607 ~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~ 685 (939)
T TIGR00461 607 CDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVC 685 (939)
T ss_pred cCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEE
Confidence 4 489999999974 3599999999999 788877 99999999999999999999744 23456778999999
Q ss_pred Eecccccccccc---CceEEEEEeChHHHHHHHH--HH---------H--------HhCCCchHHHHHH--HHHhhHHHH
Q 012321 352 LHSATKFIGGHN---DVLAGSISGSGKLVTQIRN--LH---------H--------VLGGALNPNAAYL--IIRGMKTLH 407 (466)
Q Consensus 352 v~S~sK~lgG~g---dv~gG~vvg~~eli~~l~~--~~---------~--------~~G~~ls~~~A~l--~lrgL~tl~ 407 (466)
+.|.||+|++|- .-..|++.+++++...+-. +. . .+|..+-...+|+ .+.|-+.|.
T Consensus 686 ~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~ 765 (939)
T TIGR00461 686 HLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLP 765 (939)
T ss_pred EecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHH
Confidence 999999776322 1135888887665433320 00 0 0111111133443 344556666
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcEEEeCCC---------------CC---CCcchHHHHhhc-CCc-ceEEEEEece
Q 012321 408 LRVQQQNSTALRMAKILEAHPKVKRVHYPG---------------LK---SHPEHHIATQQM-TGF-GGVVSFEVCV 464 (466)
Q Consensus 408 ~R~e~~~~na~~La~~L~~~p~V~~V~~Pg---------------L~---s~p~~~l~~~~~-~g~-Ggl~sfel~~ 464 (466)
...+....|+.++++.|+++.. +.|++ ++ .-+.-+++|+.+ .|+ ++.++|-+.|
T Consensus 766 ~~a~~ailnAnYl~~rL~~~~~---~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g 839 (939)
T TIGR00461 766 KASVVAILNANYMATRLKDHYP---ILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPG 839 (939)
T ss_pred HHHHHHHHHHHHHHHHhhccCc---ccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCC
Confidence 6677788899999999988653 23332 11 123567888888 454 6666654443
No 264
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.53 E-value=2.1e-12 Score=139.22 Aligned_cols=203 Identities=17% Similarity=0.152 Sum_probs=135.9
Q ss_pred EEEeCCHHHHHHHHHHHh----cc----------------------CCCEEEEcCCCccchHHHHHhhcccCCc---EEE
Q 012321 228 TVIMASGMSASTVMLLAL----VP----------------------AGGHIVTTTDCYRKTRIFIETVLPKMGI---TAT 278 (466)
Q Consensus 228 ~v~~~SG~aAi~~al~al----l~----------------------pGD~VLv~~~~y~~t~~~~~~~l~~~gi---~v~ 278 (466)
.+++++|++|+..++.+. +. ++..|++++..|.+..... ...|+ +++
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa----~~lglg~~~v~ 237 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAA----DVLGIGRDNLI 237 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHH----HHcCCCcccEE
Confidence 677888888877766542 11 2357888888898865443 22333 344
Q ss_pred EeC-----CCCHHHHHHhccC---CCceEEEEe--CCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccch-----
Q 012321 279 VID-----PADMEGLEAALNN---NNVSLFFTE--SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----- 343 (466)
Q Consensus 279 ~vd-----~~D~e~Le~ai~~---~~tklV~le--sPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~p----- 343 (466)
.++ ..|+++|+++|++ .+++.+.+. ..++.+|.+.|+++|+++|+++|++++||.+|+.+....+
T Consensus 238 ~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~ 317 (522)
T TIGR03799 238 AIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHL 317 (522)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHH
Confidence 433 2489999998852 234545444 4566899999999999999999999999999986543222
Q ss_pred hc--cCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHh--------------CC-CchHHHHHHHHHh--h
Q 012321 344 LS--LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVL--------------GG-ALNPNAAYLIIRG--M 403 (466)
Q Consensus 344 l~--~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~--------------G~-~ls~~~A~l~lrg--L 403 (466)
+. .++|.++.|.||++.++-+ .|+++. ++++.+.+.....++ |+ ....+..|.+++. .
T Consensus 318 l~gle~aDSit~d~HK~l~~P~g--~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~ 395 (522)
T TIGR03799 318 LKGIERADSVTIDAHKQLYVPMG--AGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGR 395 (522)
T ss_pred hcCchhCCEEEEChhhcCCcCcc--cEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhH
Confidence 22 2689999999999888863 466655 455555443210000 11 1112345655553 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCC
Q 012321 404 KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 404 ~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~P 436 (466)
+.+...+++..+.++++++.|+++|.++.+.-|
T Consensus 396 ~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p 428 (522)
T TIGR03799 396 KGYELLIDQSIEKAKYFADLIQQQPDFELVTEP 428 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC
Confidence 557778888999999999999999988766544
No 265
>PLN02624 ornithine-delta-aminotransferase
Probab=99.52 E-value=2.4e-12 Score=137.64 Aligned_cols=199 Identities=16% Similarity=0.181 Sum_probs=132.9
Q ss_pred CCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc---------CCC-EEEEcCCCccchH-HHHHhhc---
Q 012321 205 GRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AGG-HIVTTTDCYRKTR-IFIETVL--- 270 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~---------pGD-~VLv~~~~y~~t~-~~~~~~l--- 270 (466)
.++.++...+|+++|+++.+.+.+++++||++|+..++..... ++. .|+.....|.+.. ..+....
T Consensus 112 ~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~ 191 (474)
T PLN02624 112 RAFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNE 191 (474)
T ss_pred cccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCcc
Confidence 3466788899999999999888999999999999988864332 133 5777777777632 2221000
Q ss_pred --ccC---CcEEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC-
Q 012321 271 --PKM---GITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP- 338 (466)
Q Consensus 271 --~~~---gi~v~~vd~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~- 338 (466)
..+ .-.+.+++..|++.+++.++. .++++|++|.++|++|.+.+ +++|.++|++||+++|+||++...
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~G 271 (474)
T PLN02624 192 ATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLA 271 (474)
T ss_pred ccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcC
Confidence 000 012344566788999988853 24899999999999999887 999999999999999999998621
Q ss_pred Ccc-----chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH
Q 012321 339 LNQ-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL 406 (466)
Q Consensus 339 ~~~-----~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl 406 (466)
... .......|+++ ++|.+++++. ..|++++++++++.+...........++..+..++..++.+
T Consensus 272 rtG~~~a~~~~~i~pDiv~--lsK~lggG~~-pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l 341 (474)
T PLN02624 272 RTGKMLACDWEEVRPDVVI--LGKALGGGVI-PVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVV 341 (474)
T ss_pred cCcchhhHHhcCCCCCEEE--ecccccCCCC-cceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 111 11122356666 5799987643 46777888888776653322111123555555555555444
No 266
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.51 E-value=1.8e-12 Score=147.88 Aligned_cols=214 Identities=16% Similarity=0.181 Sum_probs=147.0
Q ss_pred hHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHh----ccCCC----EEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 211 TTVVVEEKMSALEGAESTVIMASGM-SASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~al----l~pGD----~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
...+++++|++++|.+.+-+..+|+ ++..+.++++ .++|| +|++++..|++.... +...|++++.++
T Consensus 543 ~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s----a~~~G~~vv~v~ 618 (954)
T PRK05367 543 LIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS----AVMAGMKVVVVA 618 (954)
T ss_pred HHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH----HHHCCCEEEEEC
Confidence 3567789999999998877777665 5554444333 25665 599999999886543 345688888775
Q ss_pred C-----CCHHHHHHhccCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC--CccchhccCCcEEE
Q 012321 282 P-----ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVL 352 (466)
Q Consensus 282 ~-----~D~e~Le~ai~~~--~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~--~~~~pl~~gaDivv 352 (466)
. .|+++|+++++++ ++.+|++.+|++-.+...|+++|+++||++|+++++|.++... ....|.++|+|+++
T Consensus 619 ~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~ 698 (954)
T PRK05367 619 CDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSH 698 (954)
T ss_pred CCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEE
Confidence 3 3789999999653 4788889888865333468999999999999999999998533 23467788999999
Q ss_pred eccccccccccC---ceEEEEEeChHHHHHHHHHH-------HHhCCCc-hHH---------HHHHHHHhhHHHHHHHHH
Q 012321 353 HSATKFIGGHND---VLAGSISGSGKLVTQIRNLH-------HVLGGAL-NPN---------AAYLIIRGMKTLHLRVQQ 412 (466)
Q Consensus 353 ~S~sK~lgG~gd---v~gG~vvg~~eli~~l~~~~-------~~~G~~l-s~~---------~A~l~lrgL~tl~~R~e~ 412 (466)
.|+||+|+.|-+ --.|++..++.+...+-... ...|... +++ ..|+...|.+.+..+.++
T Consensus 699 ~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~ 778 (954)
T PRK05367 699 LNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEV 778 (954)
T ss_pred ecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Confidence 999999864321 12567776654443332111 0011111 111 123334466777777888
Q ss_pred HHHHHHHHHHHHHcCC
Q 012321 413 QNSTALRMAKILEAHP 428 (466)
Q Consensus 413 ~~~na~~La~~L~~~p 428 (466)
...++.++++.|+++.
T Consensus 779 ~~~~A~Yl~~~L~~~~ 794 (954)
T PRK05367 779 AILNANYIAKRLKDHY 794 (954)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 8889999999998763
No 267
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.51 E-value=2.5e-13 Score=130.88 Aligned_cols=223 Identities=13% Similarity=0.154 Sum_probs=160.9
Q ss_pred CchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--
Q 012321 208 GNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~-e~~v~~~SG~-aAi~~al~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-- 282 (466)
.+|..+++...+++--+- .+.++++-|+ +.|.+++++.+.|| ++|+...|+|.... .-+...++++..++.
T Consensus 67 ~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~----v~A~iNd~eVvkvpl~p 142 (375)
T KOG0633|consen 67 PDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYV----VDAAINDAEVVKVPLNP 142 (375)
T ss_pred CCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEE----EEeecCCceEEEecCCC
Confidence 455556666666654332 5788999999 89999999999999 89999999997632 123445677766642
Q ss_pred ---CCHHHHHHhccCC-CceEEEEeCCCCCCcccccHHHHHHHHHhc-CCEEEEeCCCCCCCc-cch----hccCCcEEE
Q 012321 283 ---ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLN-QKA----LSLGADLVL 352 (466)
Q Consensus 283 ---~D~e~Le~ai~~~-~tklV~lesPsNPtG~v~dl~~I~ela~~~-gillIvD~t~a~~~~-~~p----l~~gaDivv 352 (466)
.+.+++.+.+..+ ++|++|+++|+||||.....+.|.++..-. +.++++||+|..+.. ... .++..-+++
T Consensus 143 dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivl 222 (375)
T KOG0633|consen 143 DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVL 222 (375)
T ss_pred CccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeeh
Confidence 3788888877643 589999999999999999888877777543 689999999865432 111 122334899
Q ss_pred eccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc-hHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012321 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-NPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l-s~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~ 429 (466)
.++||.+|-.| ++.|+-..+.++++.+...+..+.... ....|..++. .++.++...+.+.+.+.+|.+.|.+.|.
T Consensus 223 qTlSKsfGLAG-iRvG~~~~~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~ 301 (375)
T KOG0633|consen 223 QTLSKSFGLAG-IRVGYGAFPLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPF 301 (375)
T ss_pred hhhhhhcCcce-eEeecccccHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 99999999776 567888888888888887776554322 2222222332 5667777777888889999999999998
Q ss_pred cEEEeCCC
Q 012321 430 VKRVHYPG 437 (466)
Q Consensus 430 V~~V~~Pg 437 (466)
+.. |||
T Consensus 302 ~~~--~~g 307 (375)
T KOG0633|consen 302 LND--YPG 307 (375)
T ss_pred ccC--CCC
Confidence 776 454
No 268
>PLN02263 serine decarboxylase
Probab=99.50 E-value=5.9e-12 Score=133.29 Aligned_cols=239 Identities=15% Similarity=0.130 Sum_probs=163.8
Q ss_pred cCChHHHHHHHhcccC-CCccCCC---CchhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhcc--CCCEEEE
Q 012321 185 FKKTAELIDFKEKRRA-SFEYGRY---GNPTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP--AGGHIVT 254 (466)
Q Consensus 185 ~~~~~~~~~~~~~~~~-~~~Y~R~---~~p~~~~Lee~lA~l~g~e----~~v~~~SG~aAi~~al~all~--pGD~VLv 254 (466)
+....++..+.-++.+ .+.++.| ....-.++-+++++++|.+ ..+++++|++++..++.+... +...|++
T Consensus 104 ~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~ 183 (470)
T PLN02263 104 YGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYA 183 (470)
T ss_pred hhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEE
Confidence 3334444443333332 3555543 2334456667788888863 378888889998887766432 3347888
Q ss_pred cCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC--ceEEEEeCCCCCCcccccHHHHHHHHHhcCC
Q 012321 255 TTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN--VSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 255 ~~~~y~~t~~~~~~~l~~~gi~v~~vd~-----~D~e~Le~ai~~~~--tklV~lesPsNPtG~v~dl~~I~ela~~~gi 327 (466)
++..|.+... .+..+|++++.++. .|+++|+++|.++. +-+|+....+-++|.+-|+++|.++|+++|+
T Consensus 184 S~~aH~Sv~K----Aa~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~ 259 (470)
T PLN02263 184 SRESHYSVFK----AARMYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGF 259 (470)
T ss_pred cCCccHHHHH----HHHhcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCC
Confidence 8888887553 34445666666552 48999999887542 5577777888899999999999999999997
Q ss_pred -----EEEEeCCCCCCCc---cc--hh--ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH--------Hh
Q 012321 328 -----IVCIDGTFATPLN---QK--AL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VL 387 (466)
Q Consensus 328 -----llIvD~t~a~~~~---~~--pl--~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--------~~ 387 (466)
+++||.+|+..+. .. .+ ..++|-+..+.|||++.+- ..|+++.+++.++.+..... ..
T Consensus 260 ~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~--~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~ 337 (470)
T PLN02263 260 SQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPM--PCGVQITRMEHINVLSSNVEYLASRDATIM 337 (470)
T ss_pred ccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCccccCCCc--CEEEEEEehhhHhhhccChHhhCCCCCCcC
Confidence 9999999876432 11 11 2248999999999999886 35888777665544322111 12
Q ss_pred CCC--chHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012321 388 GGA--LNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 388 G~~--ls~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~ 429 (466)
|+. ..++..|..++ |.+.+..++++..++++++++.|++++.
T Consensus 338 gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~ 383 (470)
T PLN02263 338 GSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGI 383 (470)
T ss_pred CCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 221 13466777765 6788899999999999999999998843
No 269
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.50 E-value=2.5e-12 Score=130.61 Aligned_cols=196 Identities=19% Similarity=0.232 Sum_probs=132.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccC----
Q 012321 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN---- 294 (466)
Q Consensus 226 e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-------~D~e~Le~ai~~---- 294 (466)
+..+++++++.|+.++...|..|||..+++.|.|++..+ .+--+.|+++..+.. .+.+++|+++.+
T Consensus 147 ~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr---dl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~ 223 (471)
T KOG0256|consen 147 ERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKL 223 (471)
T ss_pred cceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccc---cceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHh
Confidence 456666666699999999999999999999999999532 122244788777642 357888877642
Q ss_pred -CCceEEEEeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCccch-----h------c--cCCcEEEecccc
Q 012321 295 -NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQKA-----L------S--LGADLVLHSATK 357 (466)
Q Consensus 295 -~~tklV~lesPsNPtG~v~dl---~~I~ela~~~gillIvD~t~a~~~~~~p-----l------~--~gaDivv~S~sK 357 (466)
.++|.|++.+|+||.|.+++- ..+..++.++++.||+||.|+..++..+ + . .+---++.|+||
T Consensus 224 ~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSK 303 (471)
T KOG0256|consen 224 GLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSK 303 (471)
T ss_pred CCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEecc
Confidence 258999999999999999975 4566678899999999999876554221 1 1 112268899999
Q ss_pred ccccccCceEEEEEeC-hHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH---H----HHHHHHHHHHHHHHHHHHHcC
Q 012321 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---L----HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t---l----~~R~e~~~~na~~La~~L~~~ 427 (466)
-+|.+| .+.|+|... ++++...+++.. +|. .+++..+++..-|.+ . ..--+++...-+++.+.|++.
T Consensus 304 D~GlpG-fRvGviYS~ne~VvsaA~kmss-f~~-vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l 378 (471)
T KOG0256|consen 304 DFGLPG-FRVGVIYSNNEDVVSAATKMSS-FGL-VSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL 378 (471)
T ss_pred ccCCCc-eEEEEEEecChHHHHHHHHHhh-ccC-CcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc
Confidence 999998 457888764 566666665543 343 344444443322221 1 112233334445677777764
No 270
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.48 E-value=3.8e-12 Score=125.42 Aligned_cols=213 Identities=19% Similarity=0.211 Sum_probs=159.3
Q ss_pred hHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 211 TTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
..+++.+-+...+.. .--++-++|+.++..++..++.|||.|++....-.+-+ .....+++|++|+.++.
T Consensus 51 Im~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~r--a~D~~~r~ga~V~~v~~~~G~~ 128 (385)
T KOG2862|consen 51 IMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQR--AADCARRYGAEVDVVEADIGQA 128 (385)
T ss_pred HHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHH--HHHHHHhhCceeeEEecCcccC
Confidence 355666666666664 23445578889999999999999999988654433322 23567889999988853
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCccccc-HHHHHHHHHhcCCEEEEeCCCCC-CCccchhccCCcEEEeccccccc
Q 012321 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIG 360 (466)
Q Consensus 283 ~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d-l~~I~ela~~~gillIvD~t~a~-~~~~~pl~~gaDivv~S~sK~lg 360 (466)
..+|++++++.++++++|++++-..-||.+.| ++.+.++||+|+++++||.+.+- +..+...++|+|+......|.++
T Consensus 129 ~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~ 208 (385)
T KOG2862|consen 129 VPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALG 208 (385)
T ss_pred ccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcC
Confidence 36899999999988999999999999999999 77888999999999999998543 33456668899999999999999
Q ss_pred cccCceEEEEEeChHHHHHHHHHHH--------------HhCCC---------c-----hHHHHHHHHHhhHHHHHHHHH
Q 012321 361 GHNDVLAGSISGSGKLVTQIRNLHH--------------VLGGA---------L-----NPNAAYLIIRGMKTLHLRVQQ 412 (466)
Q Consensus 361 G~gdv~gG~vvg~~eli~~l~~~~~--------------~~G~~---------l-----s~~~A~l~lrgL~tl~~R~e~ 412 (466)
+|.+ .+.+..++...++++..+. .+|.. . ..+.+.+.+-.-+-|+.++++
T Consensus 209 aP~G--LsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~r 286 (385)
T KOG2862|consen 209 APAG--LSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRR 286 (385)
T ss_pred CCCC--cceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9974 3677778877777764332 12211 1 122334444444567888999
Q ss_pred HHHHHHHHHHHHHcC
Q 012321 413 QNSTALRMAKILEAH 427 (466)
Q Consensus 413 ~~~na~~La~~L~~~ 427 (466)
|+++++.+...|+++
T Consensus 287 H~e~s~~l~~~l~~~ 301 (385)
T KOG2862|consen 287 HREMSKWLKLSLEAL 301 (385)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999885
No 271
>PLN02590 probable tyrosine decarboxylase
Probab=99.47 E-value=1.7e-11 Score=132.39 Aligned_cols=223 Identities=15% Similarity=0.147 Sum_probs=149.1
Q ss_pred CchhHHHH----HHHHHhhhCCCc---------EEEeCCHHHHHHHHHHHhcc-----------CCCEEEEcCCCccchH
Q 012321 208 GNPTTVVV----EEKMSALEGAES---------TVIMASGMSASTVMLLALVP-----------AGGHIVTTTDCYRKTR 263 (466)
Q Consensus 208 ~~p~~~~L----ee~lA~l~g~e~---------~v~~~SG~aAi~~al~all~-----------pGD~VLv~~~~y~~t~ 263 (466)
..|...++ -+++++++|.++ .+++++|++|+..++.+... +.-.|++++..|.+..
T Consensus 164 ~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~ 243 (539)
T PLN02590 164 TSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFR 243 (539)
T ss_pred cCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHH
Confidence 44555555 456677777542 67888888888776654321 1113555677777654
Q ss_pred HHHHhhcccCCc-----EEEEeC-----CCCHHHHHHhccCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCE
Q 012321 264 IFIETVLPKMGI-----TATVID-----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAI 328 (466)
Q Consensus 264 ~~~~~~l~~~gi-----~v~~vd-----~~D~e~Le~ai~~~-----~tklV~lesPsNPtG~v~dl~~I~ela~~~gil 328 (466)
... ..+|+ ....+| ..|+++|+++|.+. .+-+|+....+-.+|.+-|+++|+++|+++|+|
T Consensus 244 KAa----~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~W 319 (539)
T PLN02590 244 KAC----LIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIW 319 (539)
T ss_pred HHH----HHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCe
Confidence 433 33333 333334 25899999998542 245777777788899999999999999999999
Q ss_pred EEEeCCCCCCCccch----hcc---CCcEEEeccccccccccCceEEEEEeCh--HHHHHHHH---HH------------
Q 012321 329 VCIDGTFATPLNQKA----LSL---GADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRN---LH------------ 384 (466)
Q Consensus 329 lIvD~t~a~~~~~~p----l~~---gaDivv~S~sK~lgG~gdv~gG~vvg~~--eli~~l~~---~~------------ 384 (466)
++||.+|+......+ +.. .+|-+..++|||+..+-+ .|+++.++ .+.+.+.. +.
T Consensus 320 lHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~--cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d 397 (539)
T PLN02590 320 LHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQT--CSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVN 397 (539)
T ss_pred EEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcC--EEEEEecCHHHHHHHhhcCHHHhCCcccccccCCC
Confidence 999999987643222 122 379999999999988864 46666553 23333321 11
Q ss_pred -----HHhCCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCC
Q 012321 385 -----HVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 385 -----~~~G~~ls~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~P 436 (466)
..++.....+..|+.++ |.+.+..+++++.+.++++++.|+++|.++.+.-|
T Consensus 398 ~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~ 456 (539)
T PLN02590 398 YKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR 456 (539)
T ss_pred ccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Confidence 01112234566777765 67789999999999999999999999877655443
No 272
>PLN02880 tyrosine decarboxylase
Probab=99.47 E-value=1e-11 Score=133.32 Aligned_cols=219 Identities=14% Similarity=0.146 Sum_probs=145.7
Q ss_pred hhHHHHHHHHHhhhCCCc---------EEEeCCHHHHHHHHHHHhcc-----C-----CC-EEEEcCCCccchHHHHHhh
Q 012321 210 PTTVVVEEKMSALEGAES---------TVIMASGMSASTVMLLALVP-----A-----GG-HIVTTTDCYRKTRIFIETV 269 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~---------~v~~~SG~aAi~~al~all~-----p-----GD-~VLv~~~~y~~t~~~~~~~ 269 (466)
..-..+-+++++++|.++ .+++++|++|+..++.+... . .. .|++++..|.+.....
T Consensus 122 ~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa--- 198 (490)
T PLN02880 122 ELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKAC--- 198 (490)
T ss_pred HHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHH---
Confidence 334455566777777542 67778888887776654321 1 12 4556777787755433
Q ss_pred cccCCc-----EEEEeC-----CCCHHHHHHhccCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC
Q 012321 270 LPKMGI-----TATVID-----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 270 l~~~gi-----~v~~vd-----~~D~e~Le~ai~~~-----~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t 334 (466)
...|+ ....+| ..|+++|+++|++. .+-+|+.+..+..+|.+.|+++|+++|+++|++++||.+
T Consensus 199 -~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA 277 (490)
T PLN02880 199 -QIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAA 277 (490)
T ss_pred -HHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehh
Confidence 33343 223333 25899999988532 246777777788899999999999999999999999999
Q ss_pred CCCCCccch-----hc--cCCcEEEeccccccccccCceEEEEEeCh-H-HHHHHHHHHHH-------------------
Q 012321 335 FATPLNQKA-----LS--LGADLVLHSATKFIGGHNDVLAGSISGSG-K-LVTQIRNLHHV------------------- 386 (466)
Q Consensus 335 ~a~~~~~~p-----l~--~gaDivv~S~sK~lgG~gdv~gG~vvg~~-e-li~~l~~~~~~------------------- 386 (466)
|+.+....+ +. .++|.++.++|||+..+-+ .|+++.++ . +.+.+..-..+
T Consensus 278 ~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~--~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i 355 (490)
T PLN02880 278 YAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFD--CSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQI 355 (490)
T ss_pred hHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCcc--EEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCc
Confidence 987643221 22 3589999999999988863 57766543 2 22322211100
Q ss_pred -hCCCchHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEe
Q 012321 387 -LGGALNPNAAYLII--RGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVH 434 (466)
Q Consensus 387 -~G~~ls~~~A~l~l--rgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~ 434 (466)
.|.....+..|+.+ .|.+.+..++++..+.++++++.|+++|.++.+.
T Consensus 356 ~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~ 406 (490)
T PLN02880 356 PLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVT 406 (490)
T ss_pred CCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence 11112245566654 4778899999999999999999999988765443
No 273
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.47 E-value=4.5e-12 Score=122.85 Aligned_cols=217 Identities=16% Similarity=0.232 Sum_probs=156.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-----
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~----- 283 (466)
.|....+-+.|++++|.+.+-++.+.-++-++++.+++++||.|++...+|..++.. +++.|.++..++..
T Consensus 60 kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvA----AEragl~v~eVp~tg~Pey 135 (382)
T COG1103 60 KPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVA----AERAGLNVAEVPNTGYPEY 135 (382)
T ss_pred CCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHH----HHhcCCeEEecCCCCCCce
Confidence 567777777799999988666554444999999999999999999999999887743 45668888777632
Q ss_pred --CHHHHHHhc----cC--CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccchhccCCcEEEec
Q 012321 284 --DMEGLEAAL----NN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (466)
Q Consensus 284 --D~e~Le~ai----~~--~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-~~~pl~~gaDivv~S 354 (466)
++|...+.| ++ .++.+.++.+|....|.+.|.++++++|+++|+++++..+|..+- ..+..+.|+|+++.|
T Consensus 136 ~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgS 215 (382)
T COG1103 136 KITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGS 215 (382)
T ss_pred EecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEec
Confidence 444443333 22 247899999999999999999999999999999999999998763 356667899999999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHHH-H--------HhCCCchHHHHHHHHHhhHHHHHHH---HHHHHHHHHHHH
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH-H--------VLGGALNPNAAYLIIRGMKTLHLRV---QQQNSTALRMAK 422 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-~--------~~G~~ls~~~A~l~lrgL~tl~~R~---e~~~~na~~La~ 422 (466)
.||.++..+ ..|++..+.++.+.+-+.. . .+|.+.-.....-+...+.....|+ ++-.++++.+.+
T Consensus 216 GHKsmAAs~--PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~ 293 (382)
T COG1103 216 GHKSMAASA--PIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVA 293 (382)
T ss_pred CccchhccC--CeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998776 4699988988887654322 1 3444321111111122333333444 444567888888
Q ss_pred HHHcCCCcE
Q 012321 423 ILEAHPKVK 431 (466)
Q Consensus 423 ~L~~~p~V~ 431 (466)
.|+++.+|.
T Consensus 294 elEkigg~~ 302 (382)
T COG1103 294 ELEKIGGVK 302 (382)
T ss_pred HHHHhhhHH
Confidence 888876443
No 274
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.45 E-value=1.5e-13 Score=139.72 Aligned_cols=211 Identities=22% Similarity=0.280 Sum_probs=50.0
Q ss_pred HHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCC---CccchHHHHHhhcccCCcEEEEeCC---CCHH
Q 012321 213 VVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTD---CYRKTRIFIETVLPKMGITATVIDP---ADME 286 (466)
Q Consensus 213 ~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~---~y~~t~~~~~~~l~~~gi~v~~vd~---~D~e 286 (466)
..+++.++.+.|+|+++++++..+|+.+++.++. +|.+||++.. .+++.++ +..++..-|..+..+.. ..++
T Consensus 50 ~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFR-ip~vm~~sGa~lvEVGttN~t~~~ 127 (367)
T PF03841_consen 50 AHVEELLCELTGAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFR-IPDVMRQSGARLVEVGTTNRTHLS 127 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccc-cccccccccccccccccccc-cccccccccccccccccccccccc
Confidence 3578889999999999999999999988887775 5778888763 3455443 23456666776666543 3578
Q ss_pred HHHHhccCCCceEEEEeCCCCCC--cc--cccHHHHHHHHHhcCCEEEEeCCCC------------CCCccchhccCCcE
Q 012321 287 GLEAALNNNNVSLFFTESPTNPF--LR--CVDVKLVSDLCHKKGAIVCIDGTFA------------TPLNQKALSLGADL 350 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPt--G~--v~dl~~I~ela~~~gillIvD~t~a------------~~~~~~pl~~gaDi 350 (466)
+++++|+++ |.+++--+++|.. |. -.+++++++++|+|++++++|-.-+ .+..+..+..|+|+
T Consensus 128 Dye~AI~e~-Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDl 206 (367)
T PF03841_consen 128 DYEKAITEN-TAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADL 206 (367)
T ss_dssp ----------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SE
T ss_pred ccccccccc-ccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCE
Confidence 999999985 8888777888874 22 3589999999999999999998741 12334556789999
Q ss_pred EEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHH----------------hhHHHHHHHHHHH
Q 012321 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR----------------GMKTLHLRVQQQN 414 (466)
Q Consensus 351 vv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lr----------------gL~tl~~R~e~~~ 414 (466)
|++|.-|.+|||. +|+++|++++++++++....-....+-..-..+.. -++.+....+...
T Consensus 207 V~fSGdKlLGGPQ---aGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~ 283 (367)
T PF03841_consen 207 VTFSGDKLLGGPQ---AGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELR 283 (367)
T ss_dssp EEEETTSSSSS-S----EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH-------------------------
T ss_pred EEEECCCcCCCCC---eEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccc
Confidence 9999999999996 89999999999999864322221122211111111 1222334456667
Q ss_pred HHHHHHHHHHHcCCC
Q 012321 415 STALRMAKILEAHPK 429 (466)
Q Consensus 415 ~na~~La~~L~~~p~ 429 (466)
+.+++|+..|+....
T Consensus 284 ~rA~~l~~~l~~~~~ 298 (367)
T PF03841_consen 284 ARAERLAAQLKAALG 298 (367)
T ss_dssp ---------------
T ss_pred ccccccccccccccc
Confidence 778888888777543
No 275
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.45 E-value=6.4e-12 Score=128.96 Aligned_cols=218 Identities=17% Similarity=0.194 Sum_probs=147.7
Q ss_pred ccCCCCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhccC-----CCEEEEcCCCccc-hHHHH--------H
Q 012321 203 EYGRYGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVPA-----GGHIVTTTDCYRK-TRIFI--------E 267 (466)
Q Consensus 203 ~Y~R~~~p~~~~Lee~lA~l~g-~e~~v~~~SG~aAi~~al~all~p-----GD~VLv~~~~y~~-t~~~~--------~ 267 (466)
.-.-|.++...+|.++|+++.+ .+.+++++||++|+..++....+- ..+||.....|++ |...+ .
T Consensus 77 ~sn~~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~ 156 (404)
T COG4992 77 VSNLFYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYR 156 (404)
T ss_pred cccccCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhc
Confidence 3344568999999999999996 889999999999999998754322 2378888888776 22111 1
Q ss_pred hhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCC----CC
Q 012321 268 TVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PL 339 (466)
Q Consensus 268 ~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~----~~ 339 (466)
..+...--.+++++..|+++++++|+++ |.+|++|...--.|.+.+ ++++.++|++||++||.||++.. +-
T Consensus 157 ~~F~Pl~~g~~~vpfnDi~al~~ai~~~-taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk 235 (404)
T COG4992 157 KGFGPLLPGFRHVPFNDIEALEAAIDED-TAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGK 235 (404)
T ss_pred cCCCCCCCCceecCCCCHHHHHHHhccC-eEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccch
Confidence 1111111245667778999999999984 999999999988887764 78999999999999999999753 22
Q ss_pred cc--chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHH--HHHHhCCCchHHHHHHHHHhhHHHH--HHHHHH
Q 012321 340 NQ--KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQ 413 (466)
Q Consensus 340 ~~--~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~--~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~ 413 (466)
+. .-...-.||++ +.|.+||. +..|.++.++++.+.+.. ....+|+ +|+.+..+...++.+. .-+++.
T Consensus 236 ~fA~e~~gV~PDI~t--laK~LgGG--~PigA~la~~~~~~~~~~G~HgSTfGG--NpLacAv~~a~l~~l~~e~ll~~v 309 (404)
T COG4992 236 LFAYEHYGVEPDILT--LAKALGGG--FPIGAMLATEEIASAFTPGDHGSTFGG--NPLACAVALAVLEVLLEEGLLENV 309 (404)
T ss_pred HHHHHHhCCCCCEEE--eeccccCC--ccceeeEEchhhhhcCCCCcccCCCCc--CHHHHHHHHHHHHHHcchhHHHHH
Confidence 21 11222357765 78999987 456777777554544332 1223444 5676666666666553 234555
Q ss_pred HHHHHHHHHHHHcC
Q 012321 414 NSTALRMAKILEAH 427 (466)
Q Consensus 414 ~~na~~La~~L~~~ 427 (466)
++....+.+.|++.
T Consensus 310 ~~~g~~~~~~L~~l 323 (404)
T COG4992 310 REKGEYLLQRLREL 323 (404)
T ss_pred HHHHHHHHHHHHHH
Confidence 55555666666553
No 276
>PLN00144 acetylornithine transaminase
Probab=99.45 E-value=2.5e-11 Score=126.41 Aligned_cols=225 Identities=15% Similarity=0.156 Sum_probs=143.2
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc---c------C------CCEEEEcCCCccchHHHHHhhcc
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---P------A------GGHIVTTTDCYRKTRIFIETVLP 271 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all---~------p------GD~VLv~~~~y~~t~~~~~~~l~ 271 (466)
+.++...+|.++|.++.+.+.+.+++||++|+..++.... . + ..+||.....|++.......+-.
T Consensus 54 ~~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~ 133 (382)
T PLN00144 54 YHTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTS 133 (382)
T ss_pred ccCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCC
Confidence 4477788899999988766788899999999998887432 1 0 24688888888774322111100
Q ss_pred ------cC---CcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc--c--HHHHHHHHHhcCCEEEEeCCCCCC
Q 012321 272 ------KM---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV--D--VKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 272 ------~~---gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~--d--l~~I~ela~~~gillIvD~t~a~~ 338 (466)
.+ --.+.+++..|++.+++.+..+++++|++|...||.|... . +++|.++|++||+++|+||++...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~ 213 (382)
T PLN00144 134 KEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGL 213 (382)
T ss_pred CccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 00 0124456667899999988655689999998888855443 3 789999999999999999997532
Q ss_pred C-ccc-----hhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH-----H
Q 012321 339 L-NQK-----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL-----H 407 (466)
Q Consensus 339 ~-~~~-----pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl-----~ 407 (466)
. ... ......| +.+++|.+++. ...|++++++++++.+...........+|..+..++..|+.+ .
T Consensus 214 gr~g~~~~~~~~~~~PD--i~t~sK~l~~G--~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~ 289 (382)
T PLN00144 214 GRTGYLWAHEAYGVEPD--IMTLAKPLAGG--LPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFL 289 (382)
T ss_pred CccchHhhhhhcCCCCC--EEEecccccCC--cceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHH
Confidence 1 111 1222356 66789999864 468999999998887753222222234566555555344333 2
Q ss_pred HHHHHHHHH-HHHHHHHHHcCCCcEEEeC
Q 012321 408 LRVQQQNST-ALRMAKILEAHPKVKRVHY 435 (466)
Q Consensus 408 ~R~e~~~~n-a~~La~~L~~~p~V~~V~~ 435 (466)
.++++..+. .+.+.+.+.++|.+..|..
T Consensus 290 ~~~~~~g~~l~~~l~~~~~~~~~~~~vrg 318 (382)
T PLN00144 290 ASVAKKGEYLRELLRRKLGGNPHVKEVRG 318 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeec
Confidence 222222221 2334445566766655543
No 277
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.44 E-value=4.6e-12 Score=131.55 Aligned_cols=225 Identities=18% Similarity=0.228 Sum_probs=147.9
Q ss_pred CchhHHHHHHH----HHhhhCCC---------cEEEeCCHHHHHHHHHHHhc--------cCC-----C-EEEEcCCCcc
Q 012321 208 GNPTTVVVEEK----MSALEGAE---------STVIMASGMSASTVMLLALV--------PAG-----G-HIVTTTDCYR 260 (466)
Q Consensus 208 ~~p~~~~Lee~----lA~l~g~e---------~~v~~~SG~aAi~~al~all--------~pG-----D-~VLv~~~~y~ 260 (466)
..|....+|+. +++++|.+ ..+++++|++++..++.+.. ..| . .|++++..|.
T Consensus 73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 152 (373)
T PF00282_consen 73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHY 152 (373)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-T
T ss_pred cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccccc
Confidence 45666666554 56666754 47888899988877765432 112 2 5777777887
Q ss_pred chHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCC----C-ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEE
Q 012321 261 KTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN----N-VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 261 ~t~~~~~~~l~~~gi~v~~vd~-----~D~e~Le~ai~~~----~-tklV~lesPsNPtG~v~dl~~I~ela~~~gillI 330 (466)
+.. +.+..+|+.++.++. .|+++|+++|++. + +-+|+....+..+|.+-|+++|.++|++++++++
T Consensus 153 S~~----Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlH 228 (373)
T PF00282_consen 153 SIE----KAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLH 228 (373)
T ss_dssp HHH----HHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEE
T ss_pred HHH----HhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeee
Confidence 754 444556776666642 4788888877532 1 3367777788889999999999999999999999
Q ss_pred EeCCCCCCCcc----chhc---cCCcEEEeccccccccccCceEEEEEeCh-HHHHHHH----HHHH-------------
Q 012321 331 IDGTFATPLNQ----KALS---LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIR----NLHH------------- 385 (466)
Q Consensus 331 vD~t~a~~~~~----~pl~---~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~----~~~~------------- 385 (466)
||.+|+..... +... ..+|-+..++||+++.+-+ .|+++.++ ..+.... .+..
T Consensus 229 VDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~--~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~ 306 (373)
T PF00282_consen 229 VDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYG--CGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYG 306 (373)
T ss_dssp EEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS---EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEE
T ss_pred ecccccccccccccccccccccccccccccchhhhhcCCcc--ceeEEeecccchHHHhccChhhhcccccccccccccc
Confidence 99999874332 2222 2479999999999998864 57766654 3333211 0000
Q ss_pred Hh----CCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCC
Q 012321 386 VL----GGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 386 ~~----G~~ls~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL 438 (466)
.. +-....+..|+.++ |.+.+..++++..+.++++++.|+++|.++.+.-|.+
T Consensus 307 ~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~ 365 (373)
T PF00282_consen 307 DYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDL 365 (373)
T ss_dssp EGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSS
T ss_pred cccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCc
Confidence 00 01123456777665 7788999999999999999999999999877665544
No 278
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.44 E-value=1.7e-11 Score=128.86 Aligned_cols=228 Identities=18% Similarity=0.169 Sum_probs=143.4
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHhcc----CC-----CEEEEcCCCccchHH-HHHhhc-c---
Q 012321 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALVP----AG-----GHIVTTTDCYRKTRI-FIETVL-P--- 271 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~aAi~~al~all~----pG-----D~VLv~~~~y~~t~~-~~~~~l-~--- 271 (466)
+.++...+|.++|.++.+. +.+.+++||++|+..++..... .| .+||.....|++... .+...- .
T Consensus 79 ~~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~ 158 (408)
T PRK04612 79 FYSAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQ 158 (408)
T ss_pred cCCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccc
Confidence 4567778888998887643 6788889999999988865331 12 368888888877432 221100 0
Q ss_pred -cC---CcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc-----HHHHHHHHHhcCCEEEEeCCCCCC-C--
Q 012321 272 -KM---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-----VKLVSDLCHKKGAIVCIDGTFATP-L-- 339 (466)
Q Consensus 272 -~~---gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d-----l~~I~ela~~~gillIvD~t~a~~-~-- 339 (466)
.+ .-.+..++..|++.+++.++++++.+|++ .|.+++|.+.. +++|.++|+++|+++|+||++... .
T Consensus 159 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~-eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G 237 (408)
T PRK04612 159 EGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVML-EPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG 237 (408)
T ss_pred cCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC
Confidence 01 11234566678999999997555667766 56666665542 789999999999999999997531 1
Q ss_pred -ccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHH
Q 012321 340 -NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 416 (466)
Q Consensus 340 -~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~n 416 (466)
.......+.+..+.+++|.+++. ...|++++++++++.+...........+|..+..++..|+.+. ..+++..+.
T Consensus 238 ~~~a~~~~~~~pdi~t~~K~l~~G--~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~ 315 (408)
T PRK04612 238 TLFAHWQEQVTPDIVTLAKALGGG--FPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQ 315 (408)
T ss_pred chhhhhhcCCCCCEEEEcchhcCC--CceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 11111234555667889999853 3567778888887776543222222345666666665555543 234445555
Q ss_pred HHHHHHHHHc----CCCcEEEeCCC
Q 012321 417 ALRMAKILEA----HPKVKRVHYPG 437 (466)
Q Consensus 417 a~~La~~L~~----~p~V~~V~~Pg 437 (466)
.+++.+.|++ ++.+..|...|
T Consensus 316 g~~l~~~l~~l~~~~~~i~~vrg~G 340 (408)
T PRK04612 316 SAALRAGLEALNAEFGVFAQVRGRG 340 (408)
T ss_pred HHHHHHHHHHHHhhCCCeeeeeccc
Confidence 5555555544 45555555444
No 279
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.44 E-value=3.6e-12 Score=132.41 Aligned_cols=158 Identities=16% Similarity=0.094 Sum_probs=115.7
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeC-CHHHHHHHHHHHhccC-CCEEEEcCCCccchHHHHHhhcccCCc-EEEEeCC-
Q 012321 210 PTTVVVEEKMSALEGAE---STVIMA-SGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGI-TATVIDP- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~~~-SG~aAi~~al~all~p-GD~VLv~~~~y~~t~~~~~~~l~~~gi-~v~~vd~- 282 (466)
...++.++.+++++|.+ ++++++ ||+.++++++.+++++ ++.|++ ...|+.. +.....+++|+ +++.+..
T Consensus 48 ~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~--~~~~~~~~~g~~~v~~~~~~ 124 (378)
T PRK03080 48 ALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSK--WATDVVKQLKLEDPRVLEAD 124 (378)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHH--HHHHHHhhcCCCCceEeccC
Confidence 45677799999999962 466665 8899999999999875 455555 5566653 23222355677 7776642
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccc
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKF 358 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~ 358 (466)
.|+++ ++. +++|.+++.+|.||.+.|+++|++ |++|+++++|.+++.+...-... .+|+++.|.+|+
T Consensus 125 ~g~~~d~~~----i~~--~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~-~iD~~~~s~~K~ 195 (378)
T PRK03080 125 YGSLPDLSA----VDF--DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS-KLDVYTFSWQKV 195 (378)
T ss_pred CCCCCCHhh----cCC--CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHH-HCcEEEEehhhh
Confidence 24444 332 567889899999999999999999 88999999999987654322222 279999999999
Q ss_pred cccccCceEEEEEeChHHHHHHH
Q 012321 359 IGGHNDVLAGSISGSGKLVTQIR 381 (466)
Q Consensus 359 lgG~gdv~gG~vvg~~eli~~l~ 381 (466)
|+++. ..|+++.++++++++.
T Consensus 196 l~~P~--G~g~l~v~~~~~~~~~ 216 (378)
T PRK03080 196 LGGEG--GHGMAILSPRAVERLE 216 (378)
T ss_pred CCCCC--ceEEEEECHHHHHhhh
Confidence 98854 2689999988887665
No 280
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.44 E-value=1.4e-12 Score=127.60 Aligned_cols=208 Identities=20% Similarity=0.260 Sum_probs=149.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHH-
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME- 286 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e- 286 (466)
.....+.||.+||++.+.|++++++++-.|+..++-+++.|.|-|+...-.|.+...-+ .++++++ .+|..|++
T Consensus 110 tq~iHk~LE~kiAqfh~rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGi-rLckry~----h~dv~~l~~ 184 (417)
T KOG1359|consen 110 TQDIHKLLESKIAQFHGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGI-RLCKRYR----HVDVFDLEH 184 (417)
T ss_pred chHHHHHHHHHHHHHhCCCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhh-HHHhhhc----cchhHHHHH
Confidence 34567899999999999999999999999999999999999999988777776644333 2334332 22333333
Q ss_pred HHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccch-------h--ccCCcEEEecccc
Q 012321 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-------L--SLGADLVLHSATK 357 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~p-------l--~~gaDivv~S~sK 357 (466)
.+.++.+- +-++|.....-+..|.+.|+++|++++++||.+|++||+++++++... + .-.+|++..+++|
T Consensus 185 ~l~~a~k~-r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgK 263 (417)
T KOG1359|consen 185 CLISACKM-RLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGK 263 (417)
T ss_pred HHHHhhhh-eEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhh
Confidence 22233332 478999988889999999999999999999999999999988765221 1 1236899999999
Q ss_pred ccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHH------HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 358 FIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNA------AYLIIRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~------A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+||.. ||+..+++++++-|+...+ .+...++|.. ++-++..- ...+++.+.+.+++.++++..
T Consensus 264 AlGga~---GGyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s---~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 264 ALGGAS---GGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS---SKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred hhcCCC---CCCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHhc
Confidence 999874 8999999999998876443 3445555432 22222222 223445556777777777654
No 281
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.44 E-value=1.5e-11 Score=130.64 Aligned_cols=220 Identities=21% Similarity=0.189 Sum_probs=150.6
Q ss_pred HHHHHHHHHhhhCC-C--cEEEeCCHHHHHHHHHHHhcc-----C---CC------EEEEcCCCccchHHHHHhhcccCC
Q 012321 212 TVVVEEKMSALEGA-E--STVIMASGMSASTVMLLALVP-----A---GG------HIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 212 ~~~Lee~lA~l~g~-e--~~v~~~SG~aAi~~al~all~-----p---GD------~VLv~~~~y~~t~~~~~~~l~~~g 274 (466)
-+++-..++++++. + ...++++|++|+..++++... . +. +|+++...|.+..... ..+|
T Consensus 103 E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa----~~lG 178 (460)
T COG0076 103 EERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAA----RYLG 178 (460)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHH----HHhC
Confidence 33444556667776 2 467888888998877765421 1 11 6999998888865443 3345
Q ss_pred cEEEEeC------CCCHHHHHHhccCCCceE--EEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc---cch
Q 012321 275 ITATVID------PADMEGLEAALNNNNVSL--FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QKA 343 (466)
Q Consensus 275 i~v~~vd------~~D~e~Le~ai~~~~tkl--V~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~---~~p 343 (466)
++.+.+. ..|+++|+++|+++ +.. |+....+-++|.+-|+++|+++|++++++++||.+|+..+. ...
T Consensus 179 ~~~~~v~~~~~~~~id~~~l~~~i~~~-t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~ 257 (460)
T COG0076 179 LGLRRVPTVPTDYRIDVDALEEAIDEN-TIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPD 257 (460)
T ss_pred CCceeEEeccCccccCHHHHHHHHHhh-ccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCcc
Confidence 5443332 34899999999986 554 77778899999999999999999999999999999886543 111
Q ss_pred ----hc-cCCcEEEeccccccccccCceEEEEEeC-hH-HHHHHHHHHHHhCC-----------Cc--hHHHHHHHHHh-
Q 012321 344 ----LS-LGADLVLHSATKFIGGHNDVLAGSISGS-GK-LVTQIRNLHHVLGG-----------AL--NPNAAYLIIRG- 402 (466)
Q Consensus 344 ----l~-~gaDivv~S~sK~lgG~gdv~gG~vvg~-~e-li~~l~~~~~~~G~-----------~l--s~~~A~l~lrg- 402 (466)
.. .++|.++.++|||+..+-+ +|+++.+ ++ +.+.+......+++ -. ..+.+|..++.
T Consensus 258 ~~~~f~l~~vdSIt~d~HK~g~aP~~--~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~l 335 (460)
T COG0076 258 GRWDFGLEGVDSITVDGHKYGLAPIG--CGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRL 335 (460)
T ss_pred chhhcCCCCceEEEECcccccCCCCC--ceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHh
Confidence 11 2689999999999887753 4666554 43 33333322222221 11 23456766554
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCC
Q 012321 403 -MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 403 -L~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL 438 (466)
.+.+...+++..++++++++.|++.+..+-+.-|.+
T Consensus 336 G~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l 372 (460)
T COG0076 336 GREGYRKLLDRTLELARYLAEELEKLGDFELVNEPEL 372 (460)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCcc
Confidence 477888889999999999999999876666665544
No 282
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.44 E-value=2.9e-12 Score=125.66 Aligned_cols=178 Identities=21% Similarity=0.351 Sum_probs=140.2
Q ss_pred cCCCccCCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcCC-CccchHHHH------Hh
Q 012321 199 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTTD-CYRKTRIFI------ET 268 (466)
Q Consensus 199 ~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~---~~SG~aAi~~al~all~pGD~VLv~~~-~y~~t~~~~------~~ 268 (466)
+.+|.|... -++.|++..|+.+|+|.+++ +-||+.||..+|..+++|||+.+.... .|......+ ..
T Consensus 57 stGYGydD~---GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~g 133 (416)
T COG4100 57 STGYGYDDL---GRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQG 133 (416)
T ss_pred CCCCCcccc---chhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcc
Confidence 456777644 47789999999999988775 679999999999999999999886542 243322222 11
Q ss_pred hcccCCcEEEEeCC-----CCHHHHHHhccCCCceEEEEeCCC----CCCcccccHHHHHHHHHhc--CCEEEEeCCCCC
Q 012321 269 VLPKMGITATVIDP-----ADMEGLEAALNNNNVSLFFTESPT----NPFLRCVDVKLVSDLCHKK--GAIVCIDGTFAT 337 (466)
Q Consensus 269 ~l~~~gi~v~~vd~-----~D~e~Le~ai~~~~tklV~lesPs----NPtG~v~dl~~I~ela~~~--gillIvD~t~a~ 337 (466)
.++.+||..+-++. .|.+.+..+++++ ||+|.+.... -|...+.+|+++.++.|+. ++++.|||+|+.
T Consensus 134 SL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~-tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE 212 (416)
T COG4100 134 SLKDFGIKYKAVPLTADGKIDIQAVKTAISDR-TKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE 212 (416)
T ss_pred cHHHhCcceeecccccCCcccHHHHHHhcCcc-ceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh
Confidence 25567887777764 3899999999985 9999996643 4667778899999999884 699999999998
Q ss_pred CCc-cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHH
Q 012321 338 PLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI 380 (466)
Q Consensus 338 ~~~-~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l 380 (466)
++- ..|...|+|++..|+-|-.||.--..||++.+++++++..
T Consensus 213 FvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~ 256 (416)
T COG4100 213 FVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAA 256 (416)
T ss_pred hhhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhh
Confidence 765 5678889999999999999887655689999999998764
No 283
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.43 E-value=1.5e-11 Score=127.31 Aligned_cols=218 Identities=15% Similarity=0.108 Sum_probs=132.6
Q ss_pred hHHHHHHHHHhhh-CC-C-cEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccch-HHHHHhh-c----ccCCc---E
Q 012321 211 TTVVVEEKMSALE-GA-E-STVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKT-RIFIETV-L----PKMGI---T 276 (466)
Q Consensus 211 ~~~~Lee~lA~l~-g~-e-~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t-~~~~~~~-l----~~~gi---~ 276 (466)
....+++.+++.+ +. + .+++++||++|+..++.... ..+++|++.+..|++. ...+... . ..++. .
T Consensus 67 ~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~ 146 (375)
T PRK04260 67 YLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPH 146 (375)
T ss_pred cCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCC
Confidence 3345566666543 22 2 35678999999998877652 4567888888887763 2222110 0 11111 1
Q ss_pred EEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc-cch-----hcc
Q 012321 277 ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-QKA-----LSL 346 (466)
Q Consensus 277 v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~~-~~p-----l~~ 346 (466)
+.+.+..|++.+++.++++ +++|++|.++|++|.+.+ +++|.++|+++|+++|+|+++..... ..+ ...
T Consensus 147 ~~~~~~~dl~~l~~~l~~~-~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~ 225 (375)
T PRK04260 147 FSYAIFNDLNSVKALVNKN-TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI 225 (375)
T ss_pred eEEeCCCCHHHHHHhcCCC-eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC
Confidence 2333446899999988764 899999999999998765 89999999999999999999753111 111 112
Q ss_pred CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHH----HHHH
Q 012321 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST----ALRM 420 (466)
Q Consensus 347 gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~n----a~~L 420 (466)
..|++ |++|.+++. ...|++++++++.+.+...........++..+..+...++.+. ..+++..++ .+.+
T Consensus 226 ~pdi~--t~sK~l~~G--~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l 301 (375)
T PRK04260 226 EPDIF--TLAKGLANG--VPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQL 301 (375)
T ss_pred CCCEE--EecccccCC--cceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 35654 799999853 4579999999888776532211112224554444444443321 223333333 3345
Q ss_pred HHHHHcCCCcEEE
Q 012321 421 AKILEAHPKVKRV 433 (466)
Q Consensus 421 a~~L~~~p~V~~V 433 (466)
.+.+.+++.+..+
T Consensus 302 ~~~~~~~~~~~~~ 314 (375)
T PRK04260 302 QKALQDKETVTTV 314 (375)
T ss_pred HHHHhhCCCeeEE
Confidence 5555566655444
No 284
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.42 E-value=1.2e-11 Score=127.48 Aligned_cols=205 Identities=10% Similarity=0.063 Sum_probs=133.1
Q ss_pred hhHHHHHHHHHhhhCC--C-cEEEeCC-HHHHHHHHHHHhcc---CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 210 PTTVVVEEKMSALEGA--E-STVIMAS-GMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~--e-~~v~~~S-G~aAi~~al~all~---pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...++.++.+++++|. + +++++++ |++++.+++..++. +||+|++ ..|+. . ....+++.|+++++++.
T Consensus 44 ~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~--g~~~~--~-~~~~a~~~g~~~~~~~~ 118 (355)
T cd00611 44 AIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVT--GAWSA--K-AAKEAKRYGGVVVIVAA 118 (355)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEEC--CHHHH--H-HHHHHHhcCCCcEEEec
Confidence 5577889999999995 2 3555545 78999999999987 5666654 12221 1 12345677888777653
Q ss_pred C------C-HHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEec
Q 012321 283 A------D-MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (466)
Q Consensus 283 ~------D-~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S 354 (466)
. + ++..+..+++ ++++|.+.+-+|.||...+ ++++.+|++++||.+++.+.. .+..++ |+++.|
T Consensus 119 ~~~g~~~~~~~~~~~~~~~-~~~lV~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~--~~~~ss 190 (355)
T cd00611 119 KEEGKYTKIPDVETWDLAP-DAAYVHYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKF--GVIYAG 190 (355)
T ss_pred ccccCCCCCCCHhhcCCCC-CCCEEEEeCCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHHh--CEEEee
Confidence 2 3 2333344555 4999999999999999743 445569999999999876543 333333 466777
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHH-------HH--Hh---CCCchHHHHHHHHHhhHH------HHHHHHHHHHH
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HH--VL---GGALNPNAAYLIIRGMKT------LHLRVQQQNST 416 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~-------~~--~~---G~~ls~~~A~l~lrgL~t------l~~R~e~~~~n 416 (466)
.+|++|.+| .|+++.++++++++... .. .. -++.+-...+.+..+++. ++.+.+++++.
T Consensus 191 ~~K~lGP~G---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l 267 (355)
T cd00611 191 AQKNLGPAG---VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQK 267 (355)
T ss_pred cccccCCCc---eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999998665 68888888877664421 10 00 122222233333333433 44556677788
Q ss_pred HHHHHHHHHcCCCc
Q 012321 417 ALRMAKILEAHPKV 430 (466)
Q Consensus 417 a~~La~~L~~~p~V 430 (466)
++++.++|++.|++
T Consensus 268 ~~~l~~~l~~~~gl 281 (355)
T cd00611 268 AQLLYDTIDNSNGF 281 (355)
T ss_pred HHHHHHHHHhCccc
Confidence 89999999998763
No 285
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.39 E-value=3.1e-11 Score=135.78 Aligned_cols=150 Identities=15% Similarity=0.207 Sum_probs=116.3
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeC-CHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 210 PTTVVVEEKMSALEGAESTVIMA-SGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~v~~~-SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
....+|++.++++.|.+.+-+.. +|+.+..+.++++.. + .++||++...|+.+... +...|+++..+
T Consensus 543 q~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas----a~~~GieVv~V 618 (954)
T PRK12566 543 AMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS----AQMAGMRVVIV 618 (954)
T ss_pred HHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH----HHHCCCEEEEe
Confidence 34678899999999998887776 777777666666432 2 36788999889765432 34468888877
Q ss_pred CC-----CCHHHHHHhccC--CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCC--CCccchhccCCcEE
Q 012321 281 DP-----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLV 351 (466)
Q Consensus 281 d~-----~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~--~~~~~pl~~gaDiv 351 (466)
+. .|+++|++.+++ .++.+|++.+|++-.+...|+++|++++|++|+++++|.+... .....|.++|+|++
T Consensus 619 p~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~ 698 (954)
T PRK12566 619 ECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVS 698 (954)
T ss_pred ccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEE
Confidence 64 489999999872 2488999999987666666799999999999999999999753 23345788999999
Q ss_pred Eecccccccccc
Q 012321 352 LHSATKFIGGHN 363 (466)
Q Consensus 352 v~S~sK~lgG~g 363 (466)
+.+++|+|++|-
T Consensus 699 ~~s~HKtf~~P~ 710 (954)
T PRK12566 699 HMNLHKTFCIPH 710 (954)
T ss_pred EecCCcccCcCc
Confidence 999999998554
No 286
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.38 E-value=5.9e-11 Score=124.19 Aligned_cols=213 Identities=11% Similarity=0.054 Sum_probs=136.7
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc------CC-CEEEEcCCCccch-HHHHHhhcccC----
Q 012321 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP------AG-GHIVTTTDCYRKT-RIFIETVLPKM---- 273 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~------pG-D~VLv~~~~y~~t-~~~~~~~l~~~---- 273 (466)
.+.++...+|.++|.+..+.+.+++++||++|+..++..... +| ++||..+..|++. ...+. .....
T Consensus 74 ~~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~-~s~~~~~~~ 152 (395)
T PRK03715 74 AFYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMS-ASGKPGWDT 152 (395)
T ss_pred cccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHh-hcCCccccc
Confidence 344666778888888766667899999999999998876641 23 5788888777663 22221 11100
Q ss_pred -----CcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCC----CCc
Q 012321 274 -----GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PLN 340 (466)
Q Consensus 274 -----gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~----~~~ 340 (466)
-..+..++..|++++++.+.++ +++|++|...+..|.+.+ +++|.++|+++|+++|+||++.. +..
T Consensus 153 ~~~~~~~~~~~~~~~d~~~l~~~l~~~-~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~ 231 (395)
T PRK03715 153 IFAPQVPGFPKAELNDIASVEKLITDK-TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTL 231 (395)
T ss_pred CCCCCCCCceeeCCchHHHHHHHcCCC-ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcch
Confidence 0012223346789999999764 899999988877788776 99999999999999999999763 111
Q ss_pred --cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH-HHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHH
Q 012321 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-HHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (466)
Q Consensus 341 --~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~-~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~ 415 (466)
........|++ +++|.+++. ...|.+++++++....... ...+ ..+|..+..++..|+.+. ..+++..+
T Consensus 232 ~a~~~~gv~PDi~--t~gK~lg~G--~p~~av~~~~~i~~~~~~~~~~T~--~g~pl~~aaala~L~~l~~~~l~~~~~~ 305 (395)
T PRK03715 232 FAYELSGIEPDIM--TLGKGIGGG--VPLAALLAKAEVAVFEAGDQGGTY--NGNPLMTAVGVAVISQLLAPGFLEGVRA 305 (395)
T ss_pred hhHhhcCCCCcee--eehhhhhCC--cceEEEEEccccccccCCCcCCCC--CCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 12222346775 467999874 3456777877775211111 0111 234666555555555543 34556666
Q ss_pred HHHHHHHHHHc
Q 012321 416 TALRMAKILEA 426 (466)
Q Consensus 416 na~~La~~L~~ 426 (466)
...++.+.|++
T Consensus 306 ~g~~l~~~L~~ 316 (395)
T PRK03715 306 RGEYLKEKLLE 316 (395)
T ss_pred HHHHHHHHHHH
Confidence 66666666654
No 287
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.38 E-value=2.1e-11 Score=134.43 Aligned_cols=172 Identities=13% Similarity=0.147 Sum_probs=127.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
.-...+.++..|+++|++...++.+|+ .++.+++++++.+||.||+++++|.+.+.. +...|+...++.+
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~a----Lilsga~PVYl~P~~n~~ 269 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHL----LMMSDVVPIWLKPTRNAL 269 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHH----HHHcCCeeEEeccccccc
Confidence 445778899999999999999999998 899999999999999999999999986643 3344666655532
Q ss_pred -----CC-----HHHHHHhccCC----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEE-EEeCCCCCCCcc------
Q 012321 283 -----AD-----MEGLEAALNNN----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV-CIDGTFATPLNQ------ 341 (466)
Q Consensus 283 -----~D-----~e~Le~ai~~~----~tklV~lesPsNPtG~v~dl~~I~ela~~~gill-IvD~t~a~~~~~------ 341 (466)
.+ .+.|+++|+++ +++++++.+|+ ..|.+.|+++|.++| |+.+ ++||+|+....+
T Consensus 270 Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~ 345 (713)
T PRK15399 270 GILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQG 345 (713)
T ss_pred CCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCC
Confidence 23 38888888643 23688898886 789999999999999 6666 699998753322
Q ss_pred -chhcc--CCcEE---EeccccccccccCceEEEEEeChHHH-HHHHHHHHHhCCC
Q 012321 342 -KALSL--GADLV---LHSATKFIGGHNDVLAGSISGSGKLV-TQIRNLHHVLGGA 390 (466)
Q Consensus 342 -~pl~~--gaDiv---v~S~sK~lgG~gdv~gG~vvg~~eli-~~l~~~~~~~G~~ 390 (466)
.++.. |+|.+ ++|.||.+++.+ .+.++..+..+- ++++.....+.++
T Consensus 346 ~sam~~~~~aD~~i~~tQStHKtL~alT--QaS~iHvk~~vd~~~~n~a~~m~~ST 399 (713)
T PRK15399 346 KSGMSGERVPGKVIFETQSTHKMLAAFS--QASLIHIKGEYDEETFNEAFMMHTST 399 (713)
T ss_pred cChhhCCCCCCeeeeeeeehhccccccc--hheeeeecCCCCHHHHHHHHHHHcCC
Confidence 22323 57877 999999999887 567776544322 4555555544433
No 288
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.37 E-value=1.6e-11 Score=126.94 Aligned_cols=212 Identities=11% Similarity=0.058 Sum_probs=136.4
Q ss_pred hhHHHHHHHHHhhhCC--C-cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCH
Q 012321 210 PTTVVVEEKMSALEGA--E-STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~--e-~~v~~-~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~ 285 (466)
...+..++.++++++. + +++++ +||+.++..++.+++.+ +.+++....|+.............+ ++..++....
T Consensus 41 ~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~ 118 (361)
T TIGR01366 41 NLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPG 118 (361)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccC-CceEEecCCC
Confidence 4567789999999997 2 34554 55889999999988743 3444555666654433333322233 4444443222
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCc
Q 012321 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDV 365 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv 365 (466)
+.++..+.+ ++++|.+.+-.|.||.+.|+++| +|++|+++++|.+.+.+...-..+. +|+++.|.+|++++++.
T Consensus 119 ~~~~~~~~~-~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~-~D~~~~s~~K~lg~~~G- 192 (361)
T TIGR01366 119 SAPEPQADP-GVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE-TDVYYFAPQKNFASDGG- 192 (361)
T ss_pred CCCCCccCC-CCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHHH-CCEEEEEchhhcCCCCc-
Confidence 344444555 49999999999999999999888 5889999999999876543222232 89999999999999862
Q ss_pred eEEEEEeChHHHHHHHHHHH-------H------h--------CCCchHHHHHHHHHhhHH------HHHHHHHHHHHHH
Q 012321 366 LAGSISGSGKLVTQIRNLHH-------V------L--------GGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (466)
Q Consensus 366 ~gG~vvg~~eli~~l~~~~~-------~------~--------G~~ls~~~A~l~lrgL~t------l~~R~e~~~~na~ 418 (466)
.++++.++++++++..... . . ..+.+....+.+...++. ++.+.+++.+.++
T Consensus 193 -l~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~ 271 (361)
T TIGR01366 193 -LWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSS 271 (361)
T ss_pred -eEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4666778887766652110 0 0 111111211122222222 4455677888888
Q ss_pred HHHHHHHcCCCc
Q 012321 419 RMAKILEAHPKV 430 (466)
Q Consensus 419 ~La~~L~~~p~V 430 (466)
++.++|++.+.+
T Consensus 272 ~l~~~l~~~~~~ 283 (361)
T TIGR01366 272 RLYSWAQERPYA 283 (361)
T ss_pred HHHHHHHhCCCc
Confidence 899888888753
No 289
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.37 E-value=9.6e-12 Score=137.12 Aligned_cols=172 Identities=13% Similarity=0.185 Sum_probs=127.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
.-...+.++..|+++|++...++++|+ .++.+++++++.+||.||+++++|.+.+.. +...|+...++.+
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~ha----Lilsga~PVYl~P~rn~~ 269 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHL----MMMSDVTPIYFRPTRNAY 269 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHH----HHHcCCeEEEeccccccc
Confidence 445788899999999999999999998 899999999999999999999999986643 3344666555532
Q ss_pred -----CC-----HHHHHHhccCC-Cce---EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-------c
Q 012321 283 -----AD-----MEGLEAALNNN-NVS---LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------Q 341 (466)
Q Consensus 283 -----~D-----~e~Le~ai~~~-~tk---lV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-------~ 341 (466)
.+ .+.|+++|+++ +.+ .+++.+|+ ..|.++|++.|.++|+.++ +++||+|+.... .
T Consensus 270 Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~ 346 (714)
T PRK15400 270 GILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGK 346 (714)
T ss_pred CCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCc
Confidence 13 78899888653 123 68887885 7899999999999999887 689999875432 2
Q ss_pred chhccCC---c--EEEeccccccccccCceEEEEEeChHH-HHHHHHHHHHhCC
Q 012321 342 KALSLGA---D--LVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGG 389 (466)
Q Consensus 342 ~pl~~ga---D--ivv~S~sK~lgG~gdv~gG~vvg~~el-i~~l~~~~~~~G~ 389 (466)
.++..|+ | ++++|.||.+++.+ .+.++..+..+ .++++.....+.+
T Consensus 347 sam~~ga~~~~~i~vtQStHKtL~alT--QaS~LHvkg~vd~~~~n~a~~m~~S 398 (714)
T PRK15400 347 CGMSGGRVEGKVIYETQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTT 398 (714)
T ss_pred ChhhcCCCCCCceEEEEchhhcccchh--HHhHHHHcCCCCHHHHHHHHHHHcC
Confidence 3344566 5 99999999999876 44454333222 1345554444443
No 290
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.37 E-value=6e-11 Score=125.25 Aligned_cols=223 Identities=19% Similarity=0.209 Sum_probs=143.5
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhh-------cc-c--C
Q 012321 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV-------LP-K--M 273 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~-g~e~~v~~~SG~aAi~~al~all~--pGD~VLv~~~~y~~t~~~~~~~-------l~-~--~ 273 (466)
+.++....|.++|+++. +.+.+++++||++|+..++..... .+++||..++.|++........ +. . .
T Consensus 87 ~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 166 (426)
T PRK00062 87 APTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSP 166 (426)
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCC
Confidence 35677788999999876 456788889999999999886543 3678999999998854222111 00 0 0
Q ss_pred Cc------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC---
Q 012321 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (466)
Q Consensus 274 gi------~v~~vd~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~--- 338 (466)
++ ....++..|++++++.++. .++++|++|.....+|.+.+ +++|.++|++||+++|+||++...
T Consensus 167 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g 246 (426)
T PRK00062 167 GVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVA 246 (426)
T ss_pred CCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccC
Confidence 11 1223344578899888853 24889999966666888887 899999999999999999997522
Q ss_pred Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH---HHhCCCchHHHHHHHHHhhHHHHH--HHH
Q 012321 339 LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTLHL--RVQ 411 (466)
Q Consensus 339 ~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~---~~~G~~ls~~~A~l~lrgL~tl~~--R~e 411 (466)
.. ........|+ .+++|.+++. . ..|++++++++++.++... .......++..+..++..|+.+.. ..+
T Consensus 247 ~~~~~~~~~~~pDi--~~~gK~l~~G-~-p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~ 322 (426)
T PRK00062 247 LGGAQGYYGVTPDL--TTLGKIIGGG-L-PVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYE 322 (426)
T ss_pred CccHHHHhCCCcch--HhhhhHhhCC-C-cceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHH
Confidence 11 1111122454 5789999853 3 3577788889888875221 111123456666555555555433 445
Q ss_pred HHHHHHHHHHHHHH----cCCCcEEE
Q 012321 412 QQNSTALRMAKILE----AHPKVKRV 433 (466)
Q Consensus 412 ~~~~na~~La~~L~----~~p~V~~V 433 (466)
+..+..+++.+.|+ +++.+..+
T Consensus 323 ~~~~~~~~~~~~l~~~~~~~~~~~~v 348 (426)
T PRK00062 323 ELEALTKRLAEGLKEAAKKAGIPLTV 348 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEE
Confidence 55555555555554 45654434
No 291
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.37 E-value=4.6e-11 Score=122.50 Aligned_cols=237 Identities=17% Similarity=0.232 Sum_probs=149.9
Q ss_pred CCCCchhHHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCccchHH-HHH------
Q 012321 205 GRYGNPTTVVVEEKMSALE--GAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRI-FIE------ 267 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~--g~e~~v~~~SG~aAi~~al~all--------~pGD~VLv~~~~y~~t~~-~~~------ 267 (466)
..+.++...+|.++|.++. +.+.+.+..||++|+..++.... ....+|+.....|++... .+.
T Consensus 54 ~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~ 133 (339)
T PF00202_consen 54 SGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPP 133 (339)
T ss_dssp TTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTH
T ss_pred cceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcc
Confidence 5567889999999999999 44778889999999999887554 234789999988887321 111
Q ss_pred --hhcccCCcEEEEeCCCCHHH----------HHH---hccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCE
Q 012321 268 --TVLPKMGITATVIDPADMEG----------LEA---ALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (466)
Q Consensus 268 --~~l~~~gi~v~~vd~~D~e~----------Le~---ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gil 328 (466)
.........+..++..++.. +++ ....+++.+|++|......|.... +++|.++|+++|++
T Consensus 134 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gil 213 (339)
T PF00202_consen 134 YRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGIL 213 (339)
T ss_dssp HHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-E
T ss_pred ccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccc
Confidence 11112222344555555444 222 222335899999987766665542 79999999999999
Q ss_pred EEEeCCCCCC------CccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh
Q 012321 329 VCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (466)
Q Consensus 329 lIvD~t~a~~------~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg 402 (466)
+|+||++... ..........|+++. +|.+++. ...|.+++++++.+.+..........-+|..+..++..
T Consensus 214 lI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~--gK~l~gG--~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~ 289 (339)
T PF00202_consen 214 LIADEVQTGFGRTGKFFASEHYGVDPDIVTF--GKGLGGG--LPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALAT 289 (339)
T ss_dssp EEEEETTTTTTTTSSSSGHHHHTSSSSEEEE--EGGGGTT--SSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHH
T ss_pred eecccccccccccCCccceecccccCccccc--ccchhhh--hhcccccccchhhccccccccccccccchHhhhhhhhH
Confidence 9999996532 112334455799886 4999986 46788888888877653322111122356666665555
Q ss_pred hHHHHHH--HHHHHHHHHHHHHHHHc----CCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEec
Q 012321 403 MKTLHLR--VQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVC 463 (466)
Q Consensus 403 L~tl~~R--~e~~~~na~~La~~L~~----~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~ 463 (466)
|+.+... .++..+...++.+.|++ +|.|..| +|.|.|++|||.
T Consensus 290 l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rg~Gl~~~ie~~ 338 (339)
T PF00202_consen 290 LEILEEEDLLERVRELGERLREGLRELAARYPLIGEV------------------RGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEE------------------EEETTEEEEEES
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------eeeCeEEEEEEE
Confidence 5554432 34444445555554443 2444443 677899999984
No 292
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.36 E-value=5.6e-11 Score=122.38 Aligned_cols=213 Identities=12% Similarity=0.063 Sum_probs=144.4
Q ss_pred CCccCCCCc---hhHHHHHHHHHhhhCC-C--cEEEeC-CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccC
Q 012321 201 SFEYGRYGN---PTTVVVEEKMSALEGA-E--STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 201 ~~~Y~R~~~---p~~~~Lee~lA~l~g~-e--~~v~~~-SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~ 273 (466)
.+..+.... ...+.+++.|+++++. + ++++++ ||+.|+.+++..++.+||++++....+.+.+ +...++++
T Consensus 25 ~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r--~~~~a~~~ 102 (349)
T TIGR01364 25 VMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKK--AAKEAKKY 102 (349)
T ss_pred ccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHh
Confidence 344444444 5677889999999985 2 366664 4889999999999999999888766665544 23566777
Q ss_pred CcEEEEeC---------CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cch
Q 012321 274 GITATVID---------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKA 343 (466)
Q Consensus 274 gi~v~~vd---------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~p 343 (466)
|+ +..+. ..|+++++ +++ ++++|.+.+-.+.||...+ ++++.++++++||.+.+.+.. .+.
T Consensus 103 g~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id~ 173 (349)
T TIGR01364 103 GV-VNVVASGKEGNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDV 173 (349)
T ss_pred CC-cEEEeccccCCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCCH
Confidence 77 44332 23455544 334 4899999888899999876 667778999999999765432 333
Q ss_pred hccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH-------HHHh--C---CCchHHHHHHHHHhhHH------
Q 012321 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVL--G---GALNPNAAYLIIRGMKT------ 405 (466)
Q Consensus 344 l~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~-------~~~~--G---~~ls~~~A~l~lrgL~t------ 405 (466)
.+ .|+++.|.+|+|+++| .|+++.++++++++... .... + ++.+-...+.+...|+.
T Consensus 174 ~~--~d~~~~ssqK~lgP~G---lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG 248 (349)
T TIGR01364 174 SK--FGLIYAGAQKNIGPAG---LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGG 248 (349)
T ss_pred HH--ccEEEEecccccCCCc---eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCC
Confidence 33 4599999999998665 68888998887765321 1101 1 12222222322223322
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCC
Q 012321 406 LHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 406 l~~R~e~~~~na~~La~~L~~~p~ 429 (466)
++.+.+++.+.++++.++|++.|+
T Consensus 249 ~e~i~~r~~~l~~~l~~~l~~~~g 272 (349)
T TIGR01364 249 VKAIEKRNQAKAQLLYDTIDNSNG 272 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 556677788889999999999875
No 293
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.36 E-value=2.5e-10 Score=121.09 Aligned_cols=229 Identities=14% Similarity=0.144 Sum_probs=143.3
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-----CCCEEEEcCCCccchH-HHHHhh----c-ccC
Q 012321 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-----AGGHIVTTTDCYRKTR-IFIETV----L-PKM 273 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~-----pGD~VLv~~~~y~~t~-~~~~~~----l-~~~ 273 (466)
..+|...+|.++|+++... +.+++++||++|+..++..... ...+||.....|++.. ..+... . +.+
T Consensus 114 ~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~ 193 (442)
T TIGR03372 114 LLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPF 193 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCC
Confidence 3578888999999988754 4577789999999998874321 2357888888887743 222110 0 111
Q ss_pred ---CcEEEEeCCCCHHHHHHhcc-----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCC----
Q 012321 274 ---GITATVIDPADMEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT---- 337 (466)
Q Consensus 274 ---gi~v~~vd~~D~e~Le~ai~-----~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~---- 337 (466)
.-.+..++..|.+++++.++ ..++.+|++|......|.+.+ +++|.++|+++|+++|+||++..
T Consensus 194 ~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt 273 (442)
T TIGR03372 194 MPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRT 273 (442)
T ss_pred CCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcc
Confidence 11234566667888777764 134899999998877788877 89999999999999999999732
Q ss_pred CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc--hHHHHHHHHHhhHHHHH--HHH
Q 012321 338 PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHL--RVQ 411 (466)
Q Consensus 338 ~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l--s~~~A~l~lrgL~tl~~--R~e 411 (466)
+.+ ..-...-.||++ ++|.+++.- ...|.+++++++.+.+.......+.+. +|..+..++..|+.+.. .++
T Consensus 274 G~~~a~e~~gv~PDivt--~gK~lg~G~-~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~ 350 (442)
T TIGR03372 274 GKMFACEHEGVQPDILC--LAKALGGGV-MPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPA 350 (442)
T ss_pred ccchhhhhcCCCCCeee--ehhhhcCCc-ccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 111 111222368776 899998631 124666778888877632111223333 56666665555555532 133
Q ss_pred HHHHHHHHHHHHHH----cCC-CcEEEeCCCC
Q 012321 412 QQNSTALRMAKILE----AHP-KVKRVHYPGL 438 (466)
Q Consensus 412 ~~~~na~~La~~L~----~~p-~V~~V~~PgL 438 (466)
+..+..+++.+.|+ ++| .|..|+-.|+
T Consensus 351 ~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl 382 (442)
T TIGR03372 351 QAAIKGDFLLDGFQQLAAEYPDLIIEARGKGL 382 (442)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEecceE
Confidence 33444444544444 356 5666655543
No 294
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.35 E-value=9e-11 Score=121.54 Aligned_cols=194 Identities=17% Similarity=0.089 Sum_probs=130.5
Q ss_pred CCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc-cCC-CEEEEcCCCccchHHHHHhh---------cccC
Q 012321 205 GRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-PAG-GHIVTTTDCYRKTRIFIETV---------LPKM 273 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all-~pG-D~VLv~~~~y~~t~~~~~~~---------l~~~ 273 (466)
..+.++...+|+++|+++.+.+.+++++||++|+..++.... .+| ++||..+..|++.....-.. ....
T Consensus 61 ~~~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~ 140 (364)
T PRK04013 61 PMFEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPL 140 (364)
T ss_pred CCcCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCC
Confidence 346788899999999999887889999999999999987553 345 89999998888743221110 1111
Q ss_pred CcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc-c---HHHHHHHHHhcCCEEEEeCCCCC---CCc--cchh
Q 012321 274 GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFAT---PLN--QKAL 344 (466)
Q Consensus 274 gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~-d---l~~I~ela~~~gillIvD~t~a~---~~~--~~pl 344 (466)
-..+..++..|++.+++.+.+ ++++|++|......|... | +++|.++|+++|+++|.||++.. +.+ ....
T Consensus 141 ~~~~~~~~~~d~~~l~~~i~~-~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~ 219 (364)
T PRK04013 141 VPGFKHIPFNDVEAAKEAITK-ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHY 219 (364)
T ss_pred CCCcEEecCCCHHHHHHHhcC-CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhc
Confidence 123445566688999999976 499999988776555543 5 89999999999999999999652 211 1222
Q ss_pred ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH
Q 012321 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH 407 (466)
Q Consensus 345 ~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~ 407 (466)
....|+++ +.|.+++. ...|.++.++++. . .........+|..+..++..|+.+.
T Consensus 220 gv~PDiv~--~gK~lggG--~P~~a~~~~~~~~-~---~~~~~T~~gnp~~~aaa~a~l~~i~ 274 (364)
T PRK04013 220 KVEPDIVT--MGKGIGNG--VPVSLTLTNFDVE-R---GKHGSTFGGNPLACKAVAVTLRILR 274 (364)
T ss_pred CCCCCEEE--ecccccCC--ceeEEEEeccccc-C---CCcCCCCCcCHHHHHHHHHHHHHHH
Confidence 33467776 58999874 3456666665541 1 1111112245666666665566554
No 295
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.34 E-value=4.3e-10 Score=119.41 Aligned_cols=226 Identities=15% Similarity=0.171 Sum_probs=137.7
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchH-HHHHhh-cc-----cCC--
Q 012321 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETV-LP-----KMG-- 274 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~-~~~~~~-l~-----~~g-- 274 (466)
.++...+|.++|.++.+. +.+.+++||++|+..++.... ....+|+.....|++.. ..+... .. .++
T Consensus 82 ~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 161 (443)
T PRK08360 82 FPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGEL 161 (443)
T ss_pred CcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCC
Confidence 467778898999988754 567788999999998887532 23457777777776632 222110 00 011
Q ss_pred cEEEEeCC-----------------CCHHHHHHhcc----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEE
Q 012321 275 ITATVIDP-----------------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIV 329 (466)
Q Consensus 275 i~v~~vd~-----------------~D~e~Le~ai~----~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gill 329 (466)
-.+.+++. .+++.+++.+. ..++++|++|...|++|.+.+ +++|.++|++||+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~ll 241 (443)
T PRK08360 162 SDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILL 241 (443)
T ss_pred CCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 01222211 12344555553 235999999977799998765 889999999999999
Q ss_pred EEeCCCCCC-Cccc-----hhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh
Q 012321 330 CIDGTFATP-LNQK-----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM 403 (466)
Q Consensus 330 IvD~t~a~~-~~~~-----pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL 403 (466)
|+||++... .... ......|++ +++|.+++ | ...|++++++++++.+...........++..+..++..+
T Consensus 242 I~DEv~~g~gr~G~~~a~~~~~~~pDii--tlsK~l~~-G-~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l 317 (443)
T PRK08360 242 VVDEVQSGLGRTGKWFAIEHFGVEPDII--TLGKPLGG-G-LPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVI 317 (443)
T ss_pred EEeccccCCCcCccchhhhhcCCCCCEE--EecccccC-C-ceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHH
Confidence 999997632 1111 112235665 57999995 3 467889999999888764322222334555555555555
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHH----cCCCcEEEeCCC
Q 012321 404 KTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPG 437 (466)
Q Consensus 404 ~tl~~--R~e~~~~na~~La~~L~----~~p~V~~V~~Pg 437 (466)
+.+.. .+++..+..+++.+.|+ ++|.+..|.--|
T Consensus 318 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~G 357 (443)
T PRK08360 318 EEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIG 357 (443)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccc
Confidence 54422 33444444455544443 356565554443
No 296
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.33 E-value=3.2e-10 Score=119.57 Aligned_cols=226 Identities=14% Similarity=0.170 Sum_probs=140.3
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHHHHhhccc---
Q 012321 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLPK--- 272 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~~~~~~~l~~--- 272 (466)
.+.++...+|.++|+++.. .+.+.+++||++|+..++..... + ..+||.....|++.......+...
T Consensus 81 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~ 160 (423)
T PRK05964 81 GFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGM 160 (423)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccc
Confidence 4567888899999999874 46788899999999998875421 2 357888888888743221111100
Q ss_pred ------CCcEEEEeC--CCC-----HHHHHHhccC--CCceEEEEeC-CCCCCccccc----HHHHHHHHHhcCCEEEEe
Q 012321 273 ------MGITATVID--PAD-----MEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 273 ------~gi~v~~vd--~~D-----~e~Le~ai~~--~~tklV~les-PsNPtG~v~d----l~~I~ela~~~gillIvD 332 (466)
....+..++ ..| ++++++.+.+ .++.+|++|. ..+..|...+ +++|.++|++||+++|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~D 240 (423)
T PRK05964 161 HALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFD 240 (423)
T ss_pred cccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 001122232 234 7788888842 2478999987 5666676653 899999999999999999
Q ss_pred CCCCCC-C---c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH---HH-HhCC--CchHHHHHHHH
Q 012321 333 GTFATP-L---N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---HH-VLGG--ALNPNAAYLII 400 (466)
Q Consensus 333 ~t~a~~-~---~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~---~~-~~G~--~ls~~~A~l~l 400 (466)
|++... - . ........|++ +++|.++|+. ...|++++++++++.+... .. ..+. ..++..+..++
T Consensus 241 Ev~tg~gr~G~~~a~~~~~v~pDi~--~~~K~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~ 317 (423)
T PRK05964 241 EIATGFGRTGTLFACEQAGVSPDIM--CLSKGLTGGY-LPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAAN 317 (423)
T ss_pred chhhCCCcCcchhHHHhcCCCCCee--eeehhhhcCc-ccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHH
Confidence 997421 1 1 11122335665 5679997653 2357788999998877531 11 1222 24566555555
Q ss_pred HhhHHHH--HHHHHHHHHHHHHHHHHHc---CCCcEEEe
Q 012321 401 RGMKTLH--LRVQQQNSTALRMAKILEA---HPKVKRVH 434 (466)
Q Consensus 401 rgL~tl~--~R~e~~~~na~~La~~L~~---~p~V~~V~ 434 (466)
..++.+. ..+++..+..+++.+.|++ +|.+..|.
T Consensus 318 a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vr 356 (423)
T PRK05964 318 ASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVR 356 (423)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHhhccCCCeEEee
Confidence 5555432 2455666666677666654 34444443
No 297
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.33 E-value=1.6e-10 Score=122.19 Aligned_cols=230 Identities=16% Similarity=0.132 Sum_probs=138.6
Q ss_pred CCCchhHHHHHHHHHhhh-CC-CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchH-HHHHhhc-----cc-CC
Q 012321 206 RYGNPTTVVVEEKMSALE-GA-ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETVL-----PK-MG 274 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~-g~-e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~-~~~~~~l-----~~-~g 274 (466)
.+.++...+|.++|+++. +. +..++.+||++|+..++.... ....+|+..+..|++.. ..+.... .. ++
T Consensus 82 ~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 161 (433)
T PRK08117 82 VIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQ 161 (433)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCC
Confidence 456788899999999998 33 455566899999999887532 22367888777777632 2221100 00 00
Q ss_pred ---cEEEEeCC-----------------CCHHHHHHhcc----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcC
Q 012321 275 ---ITATVIDP-----------------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKG 326 (466)
Q Consensus 275 ---i~v~~vd~-----------------~D~e~Le~ai~----~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~g 326 (466)
-.+..++. .+++++++.++ ..++.+|++|......|.+.+ +++|.++|++||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g 241 (433)
T PRK08117 162 PLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHG 241 (433)
T ss_pred CCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcC
Confidence 01112211 14455666553 235889999998888888887 999999999999
Q ss_pred CEEEEeCCCCCCCc-cch---hccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh
Q 012321 327 AIVCIDGTFATPLN-QKA---LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (466)
Q Consensus 327 illIvD~t~a~~~~-~~p---l~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg 402 (466)
+++|+||++...-. ... ...|.+.-+.+++|.+++ | ...|++++++++++.+...........+|..+..++..
T Consensus 242 ~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg~-G-~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~ 319 (433)
T PRK08117 242 ILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIAS-G-LPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALAT 319 (433)
T ss_pred CEEEEecchhccCccccchhHhhcCCCCCEeehhhhccC-C-CcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999763101 111 122432234689999985 3 45788889998887764322111123456666555555
Q ss_pred hHHHH--HHHHHHHHHHHHHHHHHHc----CCCcEEEeCCC
Q 012321 403 MKTLH--LRVQQQNSTALRMAKILEA----HPKVKRVHYPG 437 (466)
Q Consensus 403 L~tl~--~R~e~~~~na~~La~~L~~----~p~V~~V~~Pg 437 (466)
|+.+. ..+++..+..+++.+.|++ +|.+..|.-.|
T Consensus 320 L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G 360 (433)
T PRK08117 320 LEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIG 360 (433)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCC
Confidence 55442 2334444445555554443 45444444333
No 298
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.33 E-value=6.7e-11 Score=135.20 Aligned_cols=159 Identities=22% Similarity=0.302 Sum_probs=127.7
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh-ccC--CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHH
Q 012321 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~al-l~p--GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e 286 (466)
...+++.++++.|.+ ++-++.+++++..++++++ ..+ +|+|++++.+|+.+...+...++..|++++.++..+
T Consensus 123 l~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~-- 200 (954)
T PRK05367 123 LLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK-- 200 (954)
T ss_pred HHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--
Confidence 455688899999985 5677888888888777776 344 489999999999988888777788999999887543
Q ss_pred HHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC-CCCCccchhccCCcEEEeccccc-----cc
Q 012321 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKF-----IG 360 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~-a~~~~~~pl~~gaDivv~S~sK~-----lg 360 (466)
++. .+ ++..+++..|+ .+|.+.|+++|+++||++|+++++|... +......|-++|+||++.+.+|| +|
T Consensus 201 d~~---~~-~~~~vlvq~p~-~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~G 275 (954)
T PRK05367 201 ALD---HD-DVFGVLLQYPG-TSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFG 275 (954)
T ss_pred CCC---cc-cEEEEEEecCC-CCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCC
Confidence 111 22 37778787764 7999999999999999999999999865 44455678899999999999999 77
Q ss_pred cccCceEEEEEeChHHHHHH
Q 012321 361 GHNDVLAGSISGSGKLVTQI 380 (466)
Q Consensus 361 G~gdv~gG~vvg~~eli~~l 380 (466)
||+ +|++..++++.+++
T Consensus 276 GP~---aGflavr~~~~r~l 292 (954)
T PRK05367 276 GPH---AAYFAVRDAYKRSM 292 (954)
T ss_pred CCC---EEEEEECHHHHhhC
Confidence 875 79999888776655
No 299
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.32 E-value=4.8e-10 Score=119.11 Aligned_cols=228 Identities=15% Similarity=0.160 Sum_probs=139.4
Q ss_pred CCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchH-HHHHhhc------ccCC
Q 012321 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETVL------PKMG 274 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~-~~~~~~l------~~~g 274 (466)
+.++...+|.++|+++... +.+.+++||++|+..++.... ....+||..+..|++.. ..+...- ..++
T Consensus 82 ~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~ 161 (445)
T PRK08593 82 MYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYG 161 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCC
Confidence 4678889999999998743 456677999999999887432 22356888888777743 2221100 0010
Q ss_pred ---cEEEEeCCC----------C-------HHHHHHhcc----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcC
Q 012321 275 ---ITATVIDPA----------D-------MEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKG 326 (466)
Q Consensus 275 ---i~v~~vd~~----------D-------~e~Le~ai~----~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~g 326 (466)
..+..++.. + ++++++.+. ..++.+|++|...+..|.+.+ +++|.++|++||
T Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g 241 (445)
T PRK08593 162 PLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHG 241 (445)
T ss_pred CCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 112222211 1 134444442 235899999999887787765 899999999999
Q ss_pred CEEEEeCCCCCC-Cc-----cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 012321 327 AIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII 400 (466)
Q Consensus 327 illIvD~t~a~~-~~-----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~l 400 (466)
+++|+||++... -. ........|++ +++|.+++. ..+|++++++++++.+......+....+|..+..++
T Consensus 242 ~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~--t~gK~l~~G--~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~ 317 (445)
T PRK08593 242 ILFAVDDIQQGLGRTGKWSSISHFNITPDLM--SFGKSLAGG--MPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAAL 317 (445)
T ss_pred CEEEEechhhCCCcCchHHHHHhcCCCCCEe--eecccccCC--cccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHH
Confidence 999999997421 11 11112235766 579999864 357889999999887753222223334566655555
Q ss_pred HhhHHHH--HHHHHHHHHHHHHHHHHH----cCCCcEEEeCCCC
Q 012321 401 RGMKTLH--LRVQQQNSTALRMAKILE----AHPKVKRVHYPGL 438 (466)
Q Consensus 401 rgL~tl~--~R~e~~~~na~~La~~L~----~~p~V~~V~~PgL 438 (466)
..++.+. ..+++..+..++|.+.|+ ++|.|..|+..|+
T Consensus 318 a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 361 (445)
T PRK08593 318 ATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGL 361 (445)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccce
Confidence 5555443 234445555555555554 4676666655543
No 300
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.32 E-value=4.9e-10 Score=118.22 Aligned_cols=226 Identities=14% Similarity=0.146 Sum_probs=140.4
Q ss_pred cCCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcc---cC--
Q 012321 204 YGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP---KM-- 273 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g---~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l~---~~-- 273 (466)
+..+.++...+|.++|+++.. .+.+.+++||++|+..++.... ....+|+.....|++.......+-. .+
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~ 156 (421)
T PRK06777 77 YQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKV 156 (421)
T ss_pred ccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCccccc
Confidence 334567778889999998864 3678889999999998887432 2345788888888774322211100 00
Q ss_pred C-----cEEEEeCC----------CCHHHHHHhcc----CCCceEEEEeCCCCCCccc-cc---HHHHHHHHHhcCCEEE
Q 012321 274 G-----ITATVIDP----------ADMEGLEAALN----NNNVSLFFTESPTNPFLRC-VD---VKLVSDLCHKKGAIVC 330 (466)
Q Consensus 274 g-----i~v~~vd~----------~D~e~Le~ai~----~~~tklV~lesPsNPtG~v-~d---l~~I~ela~~~gillI 330 (466)
+ -.+..++. .+++.+++.++ ..++.+|++|...+..|.. .+ +++|.++|+++|+++|
T Consensus 157 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK06777 157 GFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLI 236 (421)
T ss_pred CCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 0 01111111 12556777664 2348899999888877753 44 8999999999999999
Q ss_pred EeCCCCCC-Cccc-----hhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH
Q 012321 331 IDGTFATP-LNQK-----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (466)
Q Consensus 331 vD~t~a~~-~~~~-----pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~ 404 (466)
+||++... .... ....-.|++ +++|.+++ | ...|++++++++++.+...........++..+..++..|+
T Consensus 237 ~DEv~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~~-G-~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 312 (421)
T PRK06777 237 ADEVQTGFARTGKLFAMEYYDVKPDLI--TMAKSLGG-G-MPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLD 312 (421)
T ss_pred EechhhCCccCCchhhhhhcCCCCCEE--eeehhhcC-C-CceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99997632 1111 112235765 68999984 4 4678899999988876543222222345665555555555
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHc----CCCcEEE
Q 012321 405 TLH--LRVQQQNSTALRMAKILEA----HPKVKRV 433 (466)
Q Consensus 405 tl~--~R~e~~~~na~~La~~L~~----~p~V~~V 433 (466)
.+. ..+++..+..+++.+.|++ +|.+..|
T Consensus 313 ~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 347 (421)
T PRK06777 313 VIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDI 347 (421)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence 432 3445555666666666654 4555444
No 301
>PRK12403 putative aminotransferase; Provisional
Probab=99.32 E-value=5.8e-10 Score=118.98 Aligned_cols=227 Identities=18% Similarity=0.212 Sum_probs=136.6
Q ss_pred CchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhc-------cCCCE-EEEcCCCccch-HHHHHhh-c---cc
Q 012321 208 GNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV-------PAGGH-IVTTTDCYRKT-RIFIETV-L---PK 272 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all-------~pGD~-VLv~~~~y~~t-~~~~~~~-l---~~ 272 (466)
.++...+|+++|+++.+ .+.+++++||++|+..++.... ++++. |+.....|++. ...+... . ..
T Consensus 96 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~ 175 (460)
T PRK12403 96 THPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE 175 (460)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc
Confidence 46778899999999886 3678899999999999887653 22334 44555566653 2222110 0 00
Q ss_pred CC---cEEEEeCCC-----------------CHHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHHHHhc
Q 012321 273 MG---ITATVIDPA-----------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (466)
Q Consensus 273 ~g---i~v~~vd~~-----------------D~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~ 325 (466)
.+ -.+..++.. +.+++++.+. ..++.+|++|......|.+.+ +++|.++|++|
T Consensus 176 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~ 255 (460)
T PRK12403 176 MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY 255 (460)
T ss_pred cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc
Confidence 00 012222210 1245655552 134789999988777788776 99999999999
Q ss_pred CCEEEEeCCCCCC------CccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH--HhCC--CchHHH
Q 012321 326 GAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGG--ALNPNA 395 (466)
Q Consensus 326 gillIvD~t~a~~------~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~--~ls~~~ 395 (466)
|+++|+||++... +...-...-.||++ +.|.+++.- +..|.+++++++++.+..... ..+. ..+|..
T Consensus 256 g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~-~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~ 332 (460)
T PRK12403 256 DVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGY-VPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVA 332 (460)
T ss_pred CCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--Ecccccccc-cceEEEEECHHHHHHHhcCCCccccCCCCCCCHHH
Confidence 9999999997421 11122223358886 899998752 124556678888877642111 1222 256777
Q ss_pred HHHHHHhhHHHHH--HHHHHH-HHHHHHHHHHH----cCCCcEEEeCCC
Q 012321 396 AYLIIRGMKTLHL--RVQQQN-STALRMAKILE----AHPKVKRVHYPG 437 (466)
Q Consensus 396 A~l~lrgL~tl~~--R~e~~~-~na~~La~~L~----~~p~V~~V~~Pg 437 (466)
+..++..|+.+.. .+++.. ++.++|.+.|+ ++|.|..|.--|
T Consensus 333 ~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G 381 (460)
T PRK12403 333 AAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAG 381 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecc
Confidence 6666666665542 234443 45555555544 466666665444
No 302
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.32 E-value=1.3e-10 Score=121.36 Aligned_cols=261 Identities=18% Similarity=0.158 Sum_probs=163.1
Q ss_pred cccCCCc-cCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc-CCCEEEEc
Q 012321 178 VNTSAYF-FKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTT 255 (466)
Q Consensus 178 ~~sst~~-~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~-pGD~VLv~ 255 (466)
.+|+|.+ -++.+++..+.. ++-.|+ ++|+..+||+.+++++|.+.++.+.+|..+...++..+++ +||++++.
T Consensus 46 LrSDTgT~apS~~m~aAM~~---GDD~Y~--gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~ 120 (467)
T TIGR02617 46 LLTDSGTGAVTQSMQAAMMR---GDEAYS--GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLD 120 (467)
T ss_pred CccCCCCCCCCHHHHHHHHc---CCcccc--cCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhccccccccccc
Confidence 6788888 488888887775 334566 7899999999999999999999999999998888888888 78877754
Q ss_pred CC-------Cccc-hHHHHHhhcccCCcEEEEe--------------C-CCCHHHHHHhccC---CCceEEEEeCCCCCC
Q 012321 256 TD-------CYRK-TRIFIETVLPKMGITATVI--------------D-PADMEGLEAALNN---NNVSLFFTESPTNPF 309 (466)
Q Consensus 256 ~~-------~y~~-t~~~~~~~l~~~gi~v~~v--------------d-~~D~e~Le~ai~~---~~tklV~lesPsNPt 309 (466)
.. .|.. +... ....|+....+ + ..|+++|+++|++ .+...+.++-.+|..
T Consensus 121 ~~~~~v~hn~~fett~g~----a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~ 196 (467)
T TIGR02617 121 RSKMVAFSNYFFDTTQGH----SQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSA 196 (467)
T ss_pred ccccccceEEEEecchHH----HHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecC
Confidence 43 1222 1111 11223332221 1 2489999999974 224444444444543
Q ss_pred -ccccc---HHHHHHHHHhcCCEEEEeCC--C--CC-------CCccch---h----ccCCcEEEeccccccccccCceE
Q 012321 310 -LRCVD---VKLVSDLCHKKGAIVCIDGT--F--AT-------PLNQKA---L----SLGADLVLHSATKFIGGHNDVLA 367 (466)
Q Consensus 310 -G~v~d---l~~I~ela~~~gillIvD~t--~--a~-------~~~~~p---l----~~gaDivv~S~sK~lgG~gdv~g 367 (466)
|.+.+ ++++.++|++||+.+++|.+ + +. .+...+ + ...+|.+..|++|-++.+ +|
T Consensus 197 GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgAp---vG 273 (467)
T TIGR02617 197 GGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVP---MG 273 (467)
T ss_pred CCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCc---cc
Confidence 66665 67899999999999999987 1 11 111111 1 146899999999999988 58
Q ss_pred EEEEeChH----HHHHHHHHHH------HhCCCchHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHcC--CCcE--
Q 012321 368 GSISGSGK----LVTQIRNLHH------VLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAH--PKVK-- 431 (466)
Q Consensus 368 G~vvg~~e----li~~l~~~~~------~~G~~ls~~~A~l~lrgL~tl--~~R~e~~~~na~~La~~L~~~--p~V~-- 431 (466)
|+++++++ +.++++.... .+| .++.-+...+..||+.. ...++...+..++|.+.|.+. |-+.
T Consensus 274 g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYG-Glagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~Gvpi~~~G 352 (467)
T TIGR02617 274 GLLCFKDDSFFDVYTECRTLCVVQEGFPTYG-GLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEIGVVCQQAG 352 (467)
T ss_pred ceEEecchhHHHHHHHHHhhcccccCCcCcC-chhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhCCCcEEecC
Confidence 99998764 3344443221 122 33333322223344431 223444445567788888775 3221
Q ss_pred --EEe------CCCCC--CCcchHHHHhhc
Q 012321 432 --RVH------YPGLK--SHPEHHIATQQM 451 (466)
Q Consensus 432 --~V~------~PgL~--s~p~~~l~~~~~ 451 (466)
.|+ .|.++ ..|.+.++...+
T Consensus 353 ghav~iDa~~~lphip~~~fpa~al~~~ly 382 (467)
T TIGR02617 353 GHAAFVDAGKLLPHIPADQFPAHALACELY 382 (467)
T ss_pred ccEEEEehhhhCCCCChhhCcHHHHHHHHH
Confidence 121 24444 467777776655
No 303
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.31 E-value=4.4e-10 Score=118.56 Aligned_cols=175 Identities=14% Similarity=0.180 Sum_probs=116.8
Q ss_pred cCCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchH-HHHHhhc----ccC
Q 012321 204 YGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETVL----PKM 273 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g---~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~-~~~~~~l----~~~ 273 (466)
+....++...+|.++|.++.. .+..++++||++|+..++.... ....+|+.....|++.. ..+...- ...
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 156 (421)
T PRK09792 77 YQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKI 156 (421)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCccccc
Confidence 334567888899999998764 2578889999999998887543 23357888888887742 2221100 000
Q ss_pred Cc-----EEEEeCC----------CCHHHHHHhcc----CCCceEEEEeCCCCCCcccc-c---HHHHHHHHHhcCCEEE
Q 012321 274 GI-----TATVIDP----------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVC 330 (466)
Q Consensus 274 gi-----~v~~vd~----------~D~e~Le~ai~----~~~tklV~lesPsNPtG~v~-d---l~~I~ela~~~gillI 330 (466)
+. .+..++. .+++.+++.++ ..++++|++|...+++|... + +++|.++|+++|+++|
T Consensus 157 ~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK09792 157 GFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMI 236 (421)
T ss_pred CCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 10 1222221 13477787775 23589999999999999765 5 8899999999999999
Q ss_pred EeCCCCCC-Ccc-----chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHH
Q 012321 331 IDGTFATP-LNQ-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN 382 (466)
Q Consensus 331 vD~t~a~~-~~~-----~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~ 382 (466)
+||++... ... ..+....|+ .+++|.+++. ...|++++++++++.+..
T Consensus 237 ~DEv~tg~gr~G~~~a~~~~~~~pDi--~t~gK~l~~G--~pigav~~~~~i~~~~~~ 290 (421)
T PRK09792 237 ADEVQSGFARTGKLFAMDHYADKPDL--MTMAKSLAGG--MPLSGVVGNANIMDAPAP 290 (421)
T ss_pred EeccccCCCCCCchhHHHhcCCCCcE--EEeehhhcCC--CceEEEEEcHHHHhccCC
Confidence 99996532 111 111123564 5789999864 457889999998877653
No 304
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.31 E-value=3.1e-11 Score=124.00 Aligned_cols=211 Identities=20% Similarity=0.243 Sum_probs=165.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~L 288 (466)
....+++|+.+|++.|.+++++|+-|-+.+...+-+++.||.-|+.....|.+.. .-++.-|..++....+|.++|
T Consensus 181 ~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~----~GaRLSgAtiRVfkHNdm~~L 256 (519)
T KOG1357|consen 181 TEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLI----TGARLSGATTRVFRHNDMQGL 256 (519)
T ss_pred HHHHHHHHHHHHHhcCCcceEEEeccccccccCcceeecCCcceeeccccchhee----ccccccCceEEEEecCCHHHH
Confidence 4568899999999999999999999998888899999999999998887777633 334556788888888888888
Q ss_pred HHhccCC------------CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc----------chhcc
Q 012321 289 EAALNNN------------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----------KALSL 346 (466)
Q Consensus 289 e~ai~~~------------~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~----------~pl~~ 346 (466)
|+.+++. +--+|++|.....-|.+.++.++.+++|++.++|+.||++..+... .+...
T Consensus 257 Er~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~ 336 (519)
T KOG1357|consen 257 ERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPE 336 (519)
T ss_pred HHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCch
Confidence 8877421 1237777888888999999999999999999999999997654331 12233
Q ss_pred CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH---------HHHHHHHHH
Q 012321 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---------HLRVQQQNS 415 (466)
Q Consensus 347 gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~tl---------~~R~e~~~~ 415 (466)
.+||.+..++|++++. ||++.+++++++.++.... ..+..++|-.+...+.+++.+ ..++++..+
T Consensus 337 dvDImMGtftKSfga~----GGyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ 412 (519)
T KOG1357|consen 337 DVDIMMGTFTKSFGAA----GGYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAE 412 (519)
T ss_pred hheeecceehhhcccc----cceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHh
Confidence 4789999999999976 5999999999998875332 345566776666666666654 467788888
Q ss_pred HHHHHHHHHHcC
Q 012321 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
|...+...|+..
T Consensus 413 ns~yfr~~l~~~ 424 (519)
T KOG1357|consen 413 NSRYFRWELQKM 424 (519)
T ss_pred hhHHHHHhhhcC
Confidence 998888888764
No 305
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.30 E-value=5.3e-10 Score=119.23 Aligned_cols=228 Identities=14% Similarity=0.166 Sum_probs=142.9
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--c--CC-CEEEEcCCCccchH-HHHHhhc-c------
Q 012321 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--P--AG-GHIVTTTDCYRKTR-IFIETVL-P------ 271 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all--~--pG-D~VLv~~~~y~~t~-~~~~~~l-~------ 271 (466)
+.+|...+|.++|+++... +.+.+++||++|+..++.... . .| .+||.....|++.. ..+...- .
T Consensus 121 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~ 200 (459)
T PRK11522 121 LLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPF 200 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCC
Confidence 3578888999999988643 567888999999999887442 1 22 36888888887743 2221100 0
Q ss_pred -cCCcEEEEeCCCCHHHHHHhccC-----CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCC----
Q 012321 272 -KMGITATVIDPADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT---- 337 (466)
Q Consensus 272 -~~gi~v~~vd~~D~e~Le~ai~~-----~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~---- 337 (466)
...-.+..++..|.+++++.++. .++.+|++|......|.+.+ ++++.++|++||+++|+||++..
T Consensus 201 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRt 280 (459)
T PRK11522 201 MPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRT 280 (459)
T ss_pred CCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCcc
Confidence 00012334555678888887752 34789999998877788776 89999999999999999999742
Q ss_pred CC--ccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc--hHHHHHHHHHhhHHHH--HHHH
Q 012321 338 PL--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLH--LRVQ 411 (466)
Q Consensus 338 ~~--~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l--s~~~A~l~lrgL~tl~--~R~e 411 (466)
+. .........||+ +++|.+++.- ...|.+++++++++.+.......+.+. +|..+..++..|+.+. ..++
T Consensus 281 G~~~a~e~~gv~PDiv--t~gK~lggG~-~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~ 357 (459)
T PRK11522 281 GKMFACEHENVQPDIL--CLAKALGGGV-MPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPA 357 (459)
T ss_pred chhhhhhccCCCCCEE--EechhhhCCC-ccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHH
Confidence 11 111122235776 6799998741 124666677887776532111223333 6666655555555543 2345
Q ss_pred HHHHHHHHHHHHHHc----CC-CcEEEeCCC
Q 012321 412 QQNSTALRMAKILEA----HP-KVKRVHYPG 437 (466)
Q Consensus 412 ~~~~na~~La~~L~~----~p-~V~~V~~Pg 437 (466)
+..+..++|.+.|++ +| .|..|+..|
T Consensus 358 ~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~G 388 (459)
T PRK11522 358 QAEQKGDYLLDGFRQLAREYPDLVQEARGKG 388 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceeeEEece
Confidence 555556666665543 55 455665554
No 306
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.29 E-value=3.7e-10 Score=119.18 Aligned_cols=229 Identities=15% Similarity=0.172 Sum_probs=137.3
Q ss_pred CCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhh-cc--c--CC--
Q 012321 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV-LP--K--MG-- 274 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~-l~--~--~g-- 274 (466)
..++...+|.+++.++.+. +..++++||++|+..++.... ....+||...+.|++........ .. . .+
T Consensus 81 ~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 160 (425)
T PRK08088 81 LAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMG 160 (425)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCC
Confidence 4467777899999987653 578899999998887776432 23456777788888754332221 10 0 01
Q ss_pred -----cEEEEeC--CC------CHHHHHHhcc----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeC
Q 012321 275 -----ITATVID--PA------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 275 -----i~v~~vd--~~------D~e~Le~ai~----~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~ 333 (466)
+....++ .. +++++++.++ .+++++|++|......|.+.. +++|.++|+++|+++|+||
T Consensus 161 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~De 240 (425)
T PRK08088 161 LMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE 240 (425)
T ss_pred CCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1111111 11 1456787775 235889999877654455443 8899999999999999999
Q ss_pred CCCCC-Cccch--h-ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--
Q 012321 334 TFATP-LNQKA--L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH-- 407 (466)
Q Consensus 334 t~a~~-~~~~p--l-~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~-- 407 (466)
++... ..... . ..+.+.-+.|++|.+++ | .+.|++++++++++.+...........++..+..++..++.+.
T Consensus 241 v~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~-G-~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~ 318 (425)
T PRK08088 241 VQTGAGRTGTLFAMEQMGVAADLTTFAKSIAG-G-FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQE 318 (425)
T ss_pred cccCCCcCcchhHHhhcCCCCCEEEEeccccC-C-CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 97642 11111 1 23444446889999984 4 4689999999999887654433333345665555554444331
Q ss_pred HHHHHHHHHH----HHHHHHHHcCCCcEEEeCCC
Q 012321 408 LRVQQQNSTA----LRMAKILEAHPKVKRVHYPG 437 (466)
Q Consensus 408 ~R~e~~~~na----~~La~~L~~~p~V~~V~~Pg 437 (466)
..+++..+.. ..+.+.+.++|.+..|..+|
T Consensus 319 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G 352 (425)
T PRK08088 319 NLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLG 352 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccc
Confidence 1122222222 23333344567665555543
No 307
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.29 E-value=1.2e-10 Score=120.51 Aligned_cols=204 Identities=11% Similarity=0.035 Sum_probs=139.2
Q ss_pred hhHHHHHHHHHhhhCC-C--cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 210 PTTVVVEEKMSALEGA-E--STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~-e--~~v~~-~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
...+.+++.++++++. + +++++ +||+.|+.+++..++.+||++++......+.+ +...++++|.. ..+..
T Consensus 48 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r--~~~~a~~~g~~-~~~~~~~~ 124 (360)
T PRK05355 48 AVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKK--AIKEAKKYGEV-NVAASSED 124 (360)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCc-eEEecccc
Confidence 6678889999999995 2 34444 67779999999999999999887765555533 23556666754 33321
Q ss_pred ---CCHHHHHH-hccCCCceEEEEeCCCCCCcccc-cHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEeccc
Q 012321 283 ---ADMEGLEA-ALNNNNVSLFFTESPTNPFLRCV-DVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (466)
Q Consensus 283 ---~D~e~Le~-ai~~~~tklV~lesPsNPtG~v~-dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~s 356 (466)
.+..++++ .+++ ++++|.+.+-.+.||.+. |+++| +|++++||.+.+.+.. .+..+ .|+++.|.+
T Consensus 125 ~g~~~~~~~~~~~l~~-~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~--~d~~~~ssq 195 (360)
T PRK05355 125 DGFTYIPPLDEWQLSD-DAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSK--FGLIYAGAQ 195 (360)
T ss_pred cCCCCCCChhhccCCC-CCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHHH--ccEEEEecc
Confidence 12334444 6766 489999988889999998 77766 8999999999765532 23333 369999999
Q ss_pred cccccccCceEEEEEeChHHHHHHHHH-H---------H--HhCCCchHHHHHHHHHhhH------HHHHHHHHHHHHHH
Q 012321 357 KFIGGHNDVLAGSISGSGKLVTQIRNL-H---------H--VLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTAL 418 (466)
Q Consensus 357 K~lgG~gdv~gG~vvg~~eli~~l~~~-~---------~--~~G~~ls~~~A~l~lrgL~------tl~~R~e~~~~na~ 418 (466)
|+++.+| .|+++.++++++++... . . ...++.+-...+.+...|+ .++.+.+++.+.++
T Consensus 196 K~lgP~G---lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~ 272 (360)
T PRK05355 196 KNIGPAG---LTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAA 272 (360)
T ss_pred ccccCCc---eEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9998665 68888998887665431 1 0 0112222222332222332 25566778888999
Q ss_pred HHHHHHHcCC
Q 012321 419 RMAKILEAHP 428 (466)
Q Consensus 419 ~La~~L~~~p 428 (466)
.+.++|++.+
T Consensus 273 ~l~~~l~~~~ 282 (360)
T PRK05355 273 LLYDAIDSSD 282 (360)
T ss_pred HHHHHHHhCC
Confidence 9999999877
No 308
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.28 E-value=1.1e-10 Score=119.69 Aligned_cols=169 Identities=25% Similarity=0.374 Sum_probs=123.9
Q ss_pred HHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCC-c-cchHHHHHhhcccCCcEEEEeCC---CCHHHH
Q 012321 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC-Y-RKTRIFIETVLPKMGITATVIDP---ADMEGL 288 (466)
Q Consensus 214 ~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~-y-~~t~~~~~~~l~~~gi~v~~vd~---~D~e~L 288 (466)
.+.+.++.+.|+++++++++-++|+.+++.++.. +.+|++..-. - ++.. -+...++..|.++..+.. ....++
T Consensus 72 ~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~-~~EvVis~g~lV~gg~~-~v~d~~~~aG~~l~EvG~tn~t~~~d~ 149 (395)
T COG1921 72 ELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAE-GKEVVVSRGELVEGGAF-RVPDIIRLAGAKLVEVGTTNRTHLKDY 149 (395)
T ss_pred HHHHHHhcccchhheeeECCcHHHHHHHHhhhcc-CCeEEEEccccccCCCC-ChhHHHHHcCCEEEEecccCcCCHHHH
Confidence 5666777777889999999999999998888776 5566654311 1 1111 133455666877777653 468899
Q ss_pred HHhccCCCceEEEEeCCCCC-CcccccHHHHHHHHHhcCCEEEEeCCCCC-----CCccchhccCCcEEEeccccccccc
Q 012321 289 EAALNNNNVSLFFTESPTNP-FLRCVDVKLVSDLCHKKGAIVCIDGTFAT-----PLNQKALSLGADLVLHSATKFIGGH 362 (466)
Q Consensus 289 e~ai~~~~tklV~lesPsNP-tG~v~dl~~I~ela~~~gillIvD~t~a~-----~~~~~pl~~gaDivv~S~sK~lgG~ 362 (466)
+.+|.++ |++++=-.-+|. .-...+.++++++||++|+++++|.+-+. +-.+..+..|+|+|++|..|.|+|+
T Consensus 150 ~~AIne~-ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGP 228 (395)
T COG1921 150 ELAINEN-TALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGP 228 (395)
T ss_pred HHHhccC-CeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCC
Confidence 9999986 766654344442 22345788999999999999999998754 3335567889999999999999999
Q ss_pred cCceEEEEEeChHHHHHHHHHHHHhC
Q 012321 363 NDVLAGSISGSGKLVTQIRNLHHVLG 388 (466)
Q Consensus 363 gdv~gG~vvg~~eli~~l~~~~~~~G 388 (466)
. +|+++|+++++++++......+
T Consensus 229 q---aGii~GkKelI~~lq~~~l~Ra 251 (395)
T COG1921 229 Q---AGIIVGKKELIEKLQSHPLKRA 251 (395)
T ss_pred c---cceEechHHHHHHHHhhhhhhh
Confidence 5 9999999999999876544444
No 309
>PRK07046 aminotransferase; Validated
Probab=99.26 E-value=2.5e-09 Score=113.85 Aligned_cols=224 Identities=20% Similarity=0.224 Sum_probs=144.9
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHH-HHHhhc-------c-cCCc
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRI-FIETVL-------P-KMGI 275 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~-~~~~~l-------~-~~gi 275 (466)
..++...+|.++|.++.+.+.+.+++||++|+..+++... ...++|+.....|++... .+.... . ..|+
T Consensus 112 ~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~ 191 (453)
T PRK07046 112 LPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQ 191 (453)
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCC
Confidence 3567788899999998887889999999999988887542 334678888888888531 111100 0 0121
Q ss_pred ------EEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCC----CCCcc
Q 012321 276 ------TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA----TPLNQ 341 (466)
Q Consensus 276 ------~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a----~~~~~ 341 (466)
.+..++..|++++++.+...++.+|++|......|.+.+ +++|.++|+++|+++|+||++. .+-.+
T Consensus 192 ~~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~ 271 (453)
T PRK07046 192 VHDLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT 271 (453)
T ss_pred CccccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh
Confidence 233445568999999996546899999987766676654 7999999999999999999974 22112
Q ss_pred chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH------H-HhCC--CchHHHHHHHHHhhHHHHH--HH
Q 012321 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH------H-VLGG--ALNPNAAYLIIRGMKTLHL--RV 410 (466)
Q Consensus 342 ~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~------~-~~G~--~ls~~~A~l~lrgL~tl~~--R~ 410 (466)
.....-.|+++ +.|.++|. ...|++++++++++.+.... . ..++ ..+|..+..++..|+.+.. ..
T Consensus 272 ~~~gv~PDi~t--~gK~lggG--~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~ 347 (453)
T PRK07046 272 RAHGLEPDFLV--VGKPIAGG--VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAY 347 (453)
T ss_pred HHhCCCcccee--ehhhhcCC--CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHH
Confidence 22233468876 79999975 35788889999988775311 0 1122 2355555555555544421 23
Q ss_pred HHHHHHHHHHHHHHH----cCCCcEEEe
Q 012321 411 QQQNSTALRMAKILE----AHPKVKRVH 434 (466)
Q Consensus 411 e~~~~na~~La~~L~----~~p~V~~V~ 434 (466)
++..+..++|.+.|+ +++.+..|.
T Consensus 348 ~~~~~~g~~l~~~L~~l~~~~~~~~~v~ 375 (453)
T PRK07046 348 AHMLALAARLAAGLRAVIARHGLPWHVT 375 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 444455555555554 455444443
No 310
>PRK06105 aminotransferase; Provisional
Probab=99.26 E-value=1.9e-09 Score=115.13 Aligned_cols=231 Identities=14% Similarity=0.161 Sum_probs=141.8
Q ss_pred cCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc------c-C-CCEEEEcCCCccchHHHHHhh----
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV------P-A-GGHIVTTTDCYRKTRIFIETV---- 269 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all------~-p-GD~VLv~~~~y~~t~~~~~~~---- 269 (466)
++++.++...+|.++|+++... +.+.+.+||++|+.+++.... . + ..+||.....|++.......+
T Consensus 86 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~ 165 (460)
T PRK06105 86 FSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLP 165 (460)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCc
Confidence 3456678888999999998753 567888999999999887642 1 2 357888788877743111000
Q ss_pred --cccCCc---EEEEeCCC------------------CHHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHH
Q 012321 270 --LPKMGI---TATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVS 319 (466)
Q Consensus 270 --l~~~gi---~v~~vd~~------------------D~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~ 319 (466)
.+.++. .+..++.. ..+++++.+. ..++.+|++|......|.+.+ +++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr 245 (460)
T PRK06105 166 NNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQ 245 (460)
T ss_pred ccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 001111 11222211 1345666663 234899999988776777765 89999
Q ss_pred HHHHhcCCEEEEeCCCCC-CC---c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-------HH
Q 012321 320 DLCHKKGAIVCIDGTFAT-PL---N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HV 386 (466)
Q Consensus 320 ela~~~gillIvD~t~a~-~~---~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-------~~ 386 (466)
++|++||+++|+||++.. +- + ..-...-.||++ ++|.++|.. +..|++++++++++.+.... ..
T Consensus 246 ~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~--~gK~lggG~-~P~~av~~~~~i~~~~~~~~~~~~~~~h~ 322 (460)
T PRK06105 246 AVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILV--MSKQLSSSY-QPLSAVLMNEKVYDPIADESGKIGTFGHG 322 (460)
T ss_pred HHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeee--eecccccCc-ccceEEEEcHHHHHHHhcccccCcccccC
Confidence 999999999999999632 11 1 122223357774 789998742 23688888998888765321 11
Q ss_pred hCCCchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH---cCCCcEEEeCCC
Q 012321 387 LGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE---AHPKVKRVHYPG 437 (466)
Q Consensus 387 ~G~~ls~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L~---~~p~V~~V~~Pg 437 (466)
.....+|..+..++..|+.+.. .+++..+..++|.+.|+ ++|.|..|+--|
T Consensus 323 ~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~G 378 (460)
T PRK06105 323 FTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEVRGVG 378 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc
Confidence 1123466766666666665542 34555555555555554 355555554433
No 311
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.25 E-value=2.1e-10 Score=122.39 Aligned_cols=156 Identities=22% Similarity=0.309 Sum_probs=122.5
Q ss_pred hHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC--------
Q 012321 211 TTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-------- 281 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd-------- 281 (466)
...+.++..|+.+|++...++.+|+ .|+..++++++++||.||+++++|.+....+ -..|....++.
T Consensus 71 ~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~gl----ilaGa~Pvyl~p~~np~~g 146 (557)
T COG1982 71 PIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGL----ILAGATPVYLEPSRNPLYG 146 (557)
T ss_pred cHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHH----HHcCCceEEecCCCCcccc
Confidence 4788899999999999999999998 8999999999999999999999999865443 22344433332
Q ss_pred ---CCCHHHHHHhccCCC-c-eEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC------ccchhccCCcE
Q 012321 282 ---PADMEGLEAALNNNN-V-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------NQKALSLGADL 350 (466)
Q Consensus 282 ---~~D~e~Le~ai~~~~-t-klV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~------~~~pl~~gaDi 350 (466)
..+.+.+++++.+++ . |++++.+|+ ..|.+.|+++|.+.+++.++++.+|++..... .....+.++|+
T Consensus 147 i~ggI~~~~~~~~l~~~~~~~k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~ 225 (557)
T COG1982 147 IIGGIPLETFKEALLAHPDAEKLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADF 225 (557)
T ss_pred ccCCCCHHHHHHHHHhChhhheeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceE
Confidence 347888888775432 4 788886776 57999999999999999999999999954322 22334578999
Q ss_pred EEeccccccccccCceEEEEEeC
Q 012321 351 VLHSATKFIGGHNDVLAGSISGS 373 (466)
Q Consensus 351 vv~S~sK~lgG~gdv~gG~vvg~ 373 (466)
+++|.||.+++.+ .+.++..+
T Consensus 226 ~tqS~HK~l~alS--QaS~iHv~ 246 (557)
T COG1982 226 VTQSTHKLLAALS--QASMIHVK 246 (557)
T ss_pred EEechhhhhhhhh--hhHHHhhC
Confidence 9999999999876 45666554
No 312
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.24 E-value=2.4e-09 Score=113.66 Aligned_cols=227 Identities=16% Similarity=0.153 Sum_probs=135.3
Q ss_pred CCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhcc-----cCCc-
Q 012321 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP-----KMGI- 275 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~al--l~pGD~VLv~~~~y~~t~~~~~~~l~-----~~gi- 275 (466)
..++...+|.++|+++.+. +..++++||++|+..++... ....++||.....|++.......+-. ..+.
T Consensus 96 ~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~ 175 (443)
T PRK06058 96 TPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFG 175 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccC
Confidence 4567788899999988752 46888999999999888732 13347899989888875422111100 0000
Q ss_pred ----EEEEeC---C-CC---------------HHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCE
Q 012321 276 ----TATVID---P-AD---------------MEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (466)
Q Consensus 276 ----~v~~vd---~-~D---------------~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gil 328 (466)
.+..++ . .+ .+.+++.+..+++.+|++|....-.|.+.+ +++|.++|++||++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gil 255 (443)
T PRK06058 176 PFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVV 255 (443)
T ss_pred CCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 111111 0 01 233444444345889998765544455543 89999999999999
Q ss_pred EEEeCCCCCCC----c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh
Q 012321 329 VCIDGTFATPL----N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (466)
Q Consensus 329 lIvD~t~a~~~----~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg 402 (466)
+|.||++...- . ......-.|+++. .|.+++. ...|++++++++++.+...........+|..+..++..
T Consensus 256 lI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~--gK~l~~G--~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~ 331 (443)
T PRK06058 256 FIADEVQTGFARTGAWFACEHEGIVPDLITT--AKGIAGG--LPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAA 331 (443)
T ss_pred EEEeccccCCCcChhhhHHHhcCCCCCEEEE--cccccCC--CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHH
Confidence 99999975321 1 1111223588765 6999853 45788889999887765332211123456666665555
Q ss_pred hHHHHH--HHHHHHHHHHHHHHHHHc----CCCcEEEeCCC
Q 012321 403 MKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPG 437 (466)
Q Consensus 403 L~tl~~--R~e~~~~na~~La~~L~~----~p~V~~V~~Pg 437 (466)
|+.+.. ..++..+...+|.+.|++ +|.|..|.--|
T Consensus 332 L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G 372 (443)
T PRK06058 332 IETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRG 372 (443)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccc
Confidence 555432 234444445555555544 56555554433
No 313
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.24 E-value=5e-10 Score=114.87 Aligned_cols=194 Identities=19% Similarity=0.235 Sum_probs=132.9
Q ss_pred CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC----CCCHHHHHHhccCC-----
Q 012321 226 ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID----PADMEGLEAALNNN----- 295 (466)
Q Consensus 226 e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd----~~D~e~Le~ai~~~----- 295 (466)
+.-+++++|. .++..+++.+++.||+|++....|.+... .++..|+++..++ ..++|.|++.+...
T Consensus 124 ~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~----s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~ 199 (472)
T KOG0634|consen 124 NWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ----SMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSY 199 (472)
T ss_pred CceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH----hccccCceEEeccccCCCCCHHHHHHHHhcCCcccc
Confidence 3466777776 99999999999999999999999998663 3556788877775 34788888877532
Q ss_pred ---CceEEEEeCC--CCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCC----Cc--------------------cch
Q 012321 296 ---NVSLFFTESP--TNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATP----LN--------------------QKA 343 (466)
Q Consensus 296 ---~tklV~lesP--sNPtG~v~dl---~~I~ela~~~gillIvD~t~a~~----~~--------------------~~p 343 (466)
+++++|. -| +||||..+.+ ++|.++|++|++++|.|+.|... +. ...
T Consensus 200 k~~~p~vlYT-IPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sf 278 (472)
T KOG0634|consen 200 KKPKPHVLYT-IPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSF 278 (472)
T ss_pred cCCCCeEEEe-CcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCc
Confidence 2556664 45 5999999875 58999999999999999986321 00 001
Q ss_pred hcc---CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCC---CchH------HHHHHHHHhhHHHHHHHH
Q 012321 344 LSL---GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG---ALNP------NAAYLIIRGMKTLHLRVQ 411 (466)
Q Consensus 344 l~~---gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~---~ls~------~~A~l~lrgL~tl~~R~e 411 (466)
+.+ |..|-..||||.++.+. +.||+.+++.+++++-........ +.++ +..|...--++++.....
T Consensus 279 lslDtdGrVIr~dSFSKiiaPGl--RlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~ 356 (472)
T KOG0634|consen 279 LSLDTDGRVIRNDSFSKIIAPGL--RLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRS 356 (472)
T ss_pred ccccccccEEeccchhhhhcCcc--eeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112 33478899999998654 789999999888876554432221 1222 223333223455555555
Q ss_pred HHHHHHHHHHHHHHc
Q 012321 412 QQNSTALRMAKILEA 426 (466)
Q Consensus 412 ~~~~na~~La~~L~~ 426 (466)
.+..++..+...|.+
T Consensus 357 ~Yt~Rrn~~l~Al~k 371 (472)
T KOG0634|consen 357 SYTERRNALLSALDK 371 (472)
T ss_pred HHHHHHHHHHHHHHH
Confidence 566666666666665
No 314
>PRK06541 hypothetical protein; Provisional
Probab=99.23 E-value=1.6e-09 Score=115.54 Aligned_cols=226 Identities=14% Similarity=0.160 Sum_probs=140.7
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCccchHHHHHhhc-----
Q 012321 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVL----- 270 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~--------pGD~VLv~~~~y~~t~~~~~~~l----- 270 (466)
.+.++...+|.++|.++.. .+.+.+++||++|+..++..... ...+||.....|++........-
T Consensus 91 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 170 (460)
T PRK06541 91 SYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAF 170 (460)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhh
Confidence 3567888889999998864 36788889999999988874321 13678888888877432111110
Q ss_pred -ccCC---cEEEEeCC----------CC--------HHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHH
Q 012321 271 -PKMG---ITATVIDP----------AD--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (466)
Q Consensus 271 -~~~g---i~v~~vd~----------~D--------~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~el 321 (466)
..++ ..+..++. .+ ++.+++.+. +.++.+|++|...++.|.+.+ +++|.++
T Consensus 171 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~l 250 (460)
T PRK06541 171 KAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREI 250 (460)
T ss_pred ccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence 0000 01111110 11 256777774 234789999888899999887 9999999
Q ss_pred HHhcCCEEEEeCCCCC-CCc-----cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH--Hh--CCCc
Q 012321 322 CHKKGAIVCIDGTFAT-PLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VL--GGAL 391 (466)
Q Consensus 322 a~~~gillIvD~t~a~-~~~-----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~--G~~l 391 (466)
|+++|+++|+||++.. +-. ........|+++ ++|.+++. ....|++++++++++.+..... .. ....
T Consensus 251 c~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~~G-~~pigav~~~~~i~~~~~~~~~~~~~~~T~~g 327 (460)
T PRK06541 251 CDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGITSG-YSPLGAMIASDRLFEPFLDGPTMFLHGYTFGG 327 (460)
T ss_pred HHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--ecccccCC-ccceeEEEEcHHHHHHhhcCCCccccCCCCCC
Confidence 9999999999999732 211 111222368775 89999853 2235777888888877653211 11 1224
Q ss_pred hHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHc---CCCcEEEe
Q 012321 392 NPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA---HPKVKRVH 434 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~--~R~e~~~~na~~La~~L~~---~p~V~~V~ 434 (466)
+|..+..++..++.+. ...++..+..++|.+.|++ +|.|..|.
T Consensus 328 np~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vr 375 (460)
T PRK06541 328 HPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVR 375 (460)
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 5666666665565543 2345566666777766655 34444443
No 315
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.22 E-value=3.5e-09 Score=111.61 Aligned_cols=230 Identities=15% Similarity=0.131 Sum_probs=137.2
Q ss_pred cCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchH-HHHHhhc----ccC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETVL----PKM 273 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~-~~~~~~l----~~~ 273 (466)
+....++...+|.++|.++... +.+.+++||++|+..++.... ....+|+.....|++.. ..+...- ...
T Consensus 70 ~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~ 149 (420)
T TIGR00700 70 FMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKS 149 (420)
T ss_pred ccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCccccc
Confidence 3345567788899999988642 578888999999998887432 23456888888887743 2221100 001
Q ss_pred Cc-----EEEEeCCC----------------CHHHHHHhcc----CCCceEEEEeCCCCCCccccc----HHHHHHHHHh
Q 012321 274 GI-----TATVIDPA----------------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (466)
Q Consensus 274 gi-----~v~~vd~~----------------D~e~Le~ai~----~~~tklV~lesPsNPtG~v~d----l~~I~ela~~ 324 (466)
+. .+..++.. +++.+++.+. .+++.+|++|....-+|.+.+ +++|.++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~ 229 (420)
T TIGR00700 150 GFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCRE 229 (420)
T ss_pred CCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHH
Confidence 11 11111110 1456666552 235899999988777787664 8999999999
Q ss_pred cCCEEEEeCCCCCCCc-c-----chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHH
Q 012321 325 KGAIVCIDGTFATPLN-Q-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 398 (466)
Q Consensus 325 ~gillIvD~t~a~~~~-~-----~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l 398 (466)
||+++|+||++..... . .......|+++ ++|.+++ | ...|++++++++++.+...........++..+..
T Consensus 230 ~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aa 305 (420)
T TIGR00700 230 HGIVFIADEVQTGFARTGAMFACEHEGPEPDLIT--TAKSLAD-G-LPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAA 305 (420)
T ss_pred cCCEEEEEecccCCcccchhHHHhhcCCCCCEEE--eeccccC-C-cceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHH
Confidence 9999999999754211 1 11222357654 8999994 4 4678899999988877532221122335555555
Q ss_pred HHHhhHHH-----HHHHHHHHH-HHHHHHHHHHcCCCcEEEeCCC
Q 012321 399 IIRGMKTL-----HLRVQQQNS-TALRMAKILEAHPKVKRVHYPG 437 (466)
Q Consensus 399 ~lrgL~tl-----~~R~e~~~~-na~~La~~L~~~p~V~~V~~Pg 437 (466)
++..++.+ ..++++..+ ....|.+..+.+|.+..|...|
T Consensus 306 a~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G 350 (420)
T TIGR00700 306 ALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLG 350 (420)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeeccc
Confidence 54444332 222222222 2333333444567666665554
No 316
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.21 E-value=3.7e-09 Score=112.27 Aligned_cols=227 Identities=13% Similarity=0.081 Sum_probs=132.5
Q ss_pred CCchhHHHHHHHHHhhhCC----CcEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcc------cC
Q 012321 207 YGNPTTVVVEEKMSALEGA----ESTVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP------KM 273 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~----e~~v~~-~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l~------~~ 273 (466)
+.++...+|.++|.++... ...+++ +||++|+..++.... ....+||.....|++.......+.. .+
T Consensus 79 ~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~ 158 (442)
T TIGR00709 79 LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAV 158 (442)
T ss_pred cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccC
Confidence 5678888999999998753 244555 799999999887432 2346788888888774322211111 00
Q ss_pred C---cEEEEeCCCC-------------H----HHHHHhcc-----CCCceEEEEeCCCCCCcccc-c---HHHHHHHHHh
Q 012321 274 G---ITATVIDPAD-------------M----EGLEAALN-----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHK 324 (466)
Q Consensus 274 g---i~v~~vd~~D-------------~----e~Le~ai~-----~~~tklV~lesPsNPtG~v~-d---l~~I~ela~~ 324 (466)
+ ..+.+++..+ . +.+++.++ ..++.+|++|.+.+..|.+. + +++|.++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~ 238 (442)
T TIGR00709 159 GMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRK 238 (442)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 0 0122222111 1 12333332 12488999998877767654 3 7899999999
Q ss_pred cCCEEEEeCCCCCC----Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHH
Q 012321 325 KGAIVCIDGTFATP----LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 398 (466)
Q Consensus 325 ~gillIvD~t~a~~----~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l 398 (466)
||+++|.||++... .+ ......-.|+++ ++|.+++ | ...|+++++++ ++.+...........+|..+..
T Consensus 239 ~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~-G-~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aa 313 (442)
T TIGR00709 239 HDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGG-G-LPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVT 313 (442)
T ss_pred cCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccC-C-cccEEEEEchH-HhccCCCcCCCCCCcCHHHHHH
Confidence 99999999996532 11 111223358888 7999998 4 45677777777 4443211111111235666665
Q ss_pred HHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCcEEEeCCCC
Q 012321 399 IIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPGL 438 (466)
Q Consensus 399 ~lrgL~tl~~--R~e~~~~na~~La~~L~----~~p~V~~V~~PgL 438 (466)
++..|+.+.. ..++..+...+|.+.|+ ++|.|..|+..||
T Consensus 314 a~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 359 (442)
T TIGR00709 314 GTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGL 359 (442)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence 5555555431 23344445555555554 4666666665543
No 317
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.20 E-value=6.7e-09 Score=109.87 Aligned_cols=223 Identities=18% Similarity=0.232 Sum_probs=144.4
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHH-HHhhc-c--------cC
Q 012321 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIF-IETVL-P--------KM 273 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g-~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~-~~~~l-~--------~~ 273 (466)
..++...+|.++|.++.. .+.+.+++||++|+..++.... ....+||.....|++.... +...- . ..
T Consensus 90 ~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 169 (428)
T PRK12389 90 TPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSA 169 (428)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCC
Confidence 467778888888888764 4678888999999999887432 2346788888888774322 21100 0 01
Q ss_pred Cc------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC---
Q 012321 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (466)
Q Consensus 274 gi------~v~~vd~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~--- 338 (466)
++ .+..++..|++.+++.+++ .++.+|++|...+..|.+.+ +++|.++|+++|+++|+||++...
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~ 249 (428)
T PRK12389 170 GVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFM 249 (428)
T ss_pred CCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccC
Confidence 11 2334455688999888852 24889999988877888877 899999999999999999996532
Q ss_pred Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-HHhC--CCchHHHHHHHHHhhHHHH--HHHH
Q 012321 339 LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLG--GALNPNAAYLIIRGMKTLH--LRVQ 411 (466)
Q Consensus 339 ~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-~~~G--~~ls~~~A~l~lrgL~tl~--~R~e 411 (466)
.. +.......|++ ++.|.+++. ...|.+++++++++.+.... ...+ ...+|..+..++..|+.+. ..++
T Consensus 250 ~~~a~~~~gv~PDiv--t~gK~lggG--~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~ 325 (428)
T PRK12389 250 YGGAQDLLGVEPDLT--ALGKIIGGG--LPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYE 325 (428)
T ss_pred cchhhHHhCCCCCee--eechhhcCC--CceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHH
Confidence 11 11222346775 579999864 34566788999888774211 1112 1345666665555555543 2345
Q ss_pred HHHHHHHHHHHHHHc----CCCcEEE
Q 012321 412 QQNSTALRMAKILEA----HPKVKRV 433 (466)
Q Consensus 412 ~~~~na~~La~~L~~----~p~V~~V 433 (466)
+..+..++|.+.|++ +|.+..+
T Consensus 326 ~~~~~g~~l~~~L~~l~~~~~~~~~v 351 (428)
T PRK12389 326 KLDRLGAMLEEGILEAAEKHGITITI 351 (428)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 555666666666654 6654444
No 318
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.20 E-value=1.8e-09 Score=114.17 Aligned_cols=231 Identities=13% Similarity=0.128 Sum_probs=138.5
Q ss_pred CCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhh------cc-cC
Q 012321 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV------LP-KM 273 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~------l~-~~ 273 (466)
.+.++...+|.++|.++.+. +.+.+++||++|+..++.... ....+|+.....|++.......+ .. .+
T Consensus 79 ~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 158 (425)
T PRK07495 79 VVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGF 158 (425)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCC
Confidence 45678888899999998753 467888999999998887432 23467888888887743211110 00 01
Q ss_pred C---cEEEEeCCC----------CHHHHHHhcc----CCCceEEEEeCCCCCCcccc-c---HHHHHHHHHhcCCEEEEe
Q 012321 274 G---ITATVIDPA----------DMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 274 g---i~v~~vd~~----------D~e~Le~ai~----~~~tklV~lesPsNPtG~v~-d---l~~I~ela~~~gillIvD 332 (466)
+ ..+..++.. +++++++.++ ..++++|++|....-+|.+. + +++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~D 238 (425)
T PRK07495 159 GAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIAD 238 (425)
T ss_pred CCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1 122233221 1445566653 23589999987765567443 3 789999999999999999
Q ss_pred CCCCCC-Cccch---hccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHH
Q 012321 333 GTFATP-LNQKA---LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL 408 (466)
Q Consensus 333 ~t~a~~-~~~~p---l~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~~ 408 (466)
|++... ..... ...|...-+.+++|.+++. ...|++++++++++.+...........++..+..++..++.+..
T Consensus 239 Ev~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~ 316 (425)
T PRK07495 239 EVQTGFARTGKLFAMEHHEVAADLTTMAKGLAGG--FPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE 316 (425)
T ss_pred chhhcCCcCCCceeecccCCCCCEEeehhhhcCC--ccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh
Confidence 997531 11111 1223333356789999864 45788999999887765322222223456665554444544432
Q ss_pred --HHHHHHHHHHHHHHHH----HcCCCcEEEeCCCC
Q 012321 409 --RVQQQNSTALRMAKIL----EAHPKVKRVHYPGL 438 (466)
Q Consensus 409 --R~e~~~~na~~La~~L----~~~p~V~~V~~PgL 438 (466)
..++..+..+++.+.| +.+|.+..|+.+|+
T Consensus 317 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 352 (425)
T PRK07495 317 EDLCERANQLGNRLKQRLASLRETVPEIADIRGPGF 352 (425)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCce
Confidence 2233334444444433 34677777776664
No 319
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.20 E-value=3.9e-09 Score=111.66 Aligned_cols=228 Identities=16% Similarity=0.160 Sum_probs=138.2
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-------CCCEEEEcCCCccchH-HHHHh-------
Q 012321 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AGGHIVTTTDCYRKTR-IFIET------- 268 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~-------pGD~VLv~~~~y~~t~-~~~~~------- 268 (466)
.+.++...+|.++|+++.+. +...+++||++|+..++..... ...+||.....|++.. ..+..
T Consensus 82 ~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~ 161 (428)
T PRK07986 82 GITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSM 161 (428)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhh
Confidence 34678888999999988753 5778889999999988874431 2367998888887732 11110
Q ss_pred --hcccCCcEEEEeC-----------CCCHHHHHHhccC--CCceEEEEeCC-CCCCcccc-c---HHHHHHHHHhcCCE
Q 012321 269 --VLPKMGITATVID-----------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCV-D---VKLVSDLCHKKGAI 328 (466)
Q Consensus 269 --~l~~~gi~v~~vd-----------~~D~e~Le~ai~~--~~tklV~lesP-sNPtG~v~-d---l~~I~ela~~~gil 328 (466)
......-.+.+++ ..|++++++.++. .++.+|++|.. ..-.|.+. + +++|.++|+++|++
T Consensus 162 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~l 241 (428)
T PRK07986 162 HSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGIL 241 (428)
T ss_pred hhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 0000000111121 1255677777742 24789999985 44445432 2 89999999999999
Q ss_pred EEEeCCCCCCCc-------cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-----HHhCCCchHHHH
Q 012321 329 VCIDGTFATPLN-------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGALNPNAA 396 (466)
Q Consensus 329 lIvD~t~a~~~~-------~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-----~~~G~~ls~~~A 396 (466)
+|+||++ +++. ..-.....||++ ++|.++|. -+..|.+++++++++.+.... .......+|..+
T Consensus 242 LI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~gG-~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~ 317 (428)
T PRK07986 242 LIADEIA-TGFGRTGKLFACEHAGIAPDILC--LGKALTGG-TMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLAC 317 (428)
T ss_pred EEEeccc-cCCccCCCeeeecccCCCCCEEE--echhhhCC-cccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHH
Confidence 9999996 3221 111222357775 89999753 134577788888888775411 111112356666
Q ss_pred HHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCcEEEeCCC
Q 012321 397 YLIIRGMKTLHL--RVQQQNSTALRMAKILEA---HPKVKRVHYPG 437 (466)
Q Consensus 397 ~l~lrgL~tl~~--R~e~~~~na~~La~~L~~---~p~V~~V~~Pg 437 (466)
..++..|+.+.. .+++..+..+++.+.|++ +|.|..|+..|
T Consensus 318 aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~G 363 (428)
T PRK07986 318 AVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAPMVADVRVLG 363 (428)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccc
Confidence 666555555432 345555566666665554 45565555444
No 320
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.19 E-value=6.7e-09 Score=112.00 Aligned_cols=228 Identities=12% Similarity=0.130 Sum_probs=136.8
Q ss_pred CCchhHHHHHHHHHhhhC-C--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCccchHH-HHHhh-c---
Q 012321 207 YGNPTTVVVEEKMSALEG-A--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTRI-FIETV-L--- 270 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g-~--e~~v~~~SG~aAi~~al~all-------~pG-D~VLv~~~~y~~t~~-~~~~~-l--- 270 (466)
..++...+|+++|.+++. . +.+++++||++|+..++.... .++ .+||..+..|++... .+... .
T Consensus 130 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~ 209 (504)
T PLN02760 130 RTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPAL 209 (504)
T ss_pred cCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhh
Confidence 356778889999888853 2 457788999999999887653 122 578888888877421 11100 0
Q ss_pred -ccCCc---EEEEeCCC----------C--------HHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHH
Q 012321 271 -PKMGI---TATVIDPA----------D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (466)
Q Consensus 271 -~~~gi---~v~~vd~~----------D--------~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~el 321 (466)
..++. .+..++.. + .+++++.+. ++++.+|++|......|.+.+ +++|.++
T Consensus 210 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~l 289 (504)
T PLN02760 210 HQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAV 289 (504)
T ss_pred ccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 01111 01122210 1 134666653 224889999988877788877 9999999
Q ss_pred HHhcCCEEEEeCCCC-CCC---c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH-------HHHhC
Q 012321 322 CHKKGAIVCIDGTFA-TPL---N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLG 388 (466)
Q Consensus 322 a~~~gillIvD~t~a-~~~---~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~-------~~~~G 388 (466)
|++||+++|+||++. .+- . ..-...-.||++ +.|.+++.. +..|.+++++++++.+... .....
T Consensus 290 c~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgK~lggG~-~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T 366 (504)
T PLN02760 290 LKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVS--LAKALSSAY-MPIGAVLVSPEISDVIHSQSNKLGSFAHGFT 366 (504)
T ss_pred HHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEE--ecccccCCc-cccceEeecHHHHhhhhcccccccCcccCCC
Confidence 999999999999963 211 1 121222357654 789998642 1246688888888877531 11111
Q ss_pred CCchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH---cCCCcEEEeCCC
Q 012321 389 GALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE---AHPKVKRVHYPG 437 (466)
Q Consensus 389 ~~ls~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L~---~~p~V~~V~~Pg 437 (466)
...+|..+..++..|+.+.. .+++..+...+|.+.|+ ++|.|..|..-|
T Consensus 367 ~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~G 420 (504)
T PLN02760 367 YSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTG 420 (504)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCc
Confidence 12356666666666655542 24555555556555554 355555444333
No 321
>PRK07482 hypothetical protein; Provisional
Probab=99.19 E-value=8.1e-09 Score=110.25 Aligned_cols=229 Identities=12% Similarity=0.051 Sum_probs=137.7
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHH-HH-------
Q 012321 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIF-IE------- 267 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~~~-~~------- 267 (466)
.+.++...+|.++|.++.. .+.+.+++||++|+..++..... + ..+||.....|++.... +.
T Consensus 90 ~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~ 169 (461)
T PRK07482 90 GHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLF 169 (461)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchh
Confidence 4567888899999998874 36788889999999998875421 2 35788888888773211 10
Q ss_pred -hhcccCCcEEEEeCC------------------CCHHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHH
Q 012321 268 -TVLPKMGITATVIDP------------------ADMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (466)
Q Consensus 268 -~~l~~~gi~v~~vd~------------------~D~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~el 321 (466)
......--.+..++. .+++++++.+. ..++.+|++|......|.+.+ +++|.++
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~l 249 (461)
T PRK07482 170 HQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAV 249 (461)
T ss_pred hhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 000000001111110 03567777773 234899999987766676643 7899999
Q ss_pred HHhcCCEEEEeCCCCCC----C--ccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-----HHhCC-
Q 012321 322 CHKKGAIVCIDGTFATP----L--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGG- 389 (466)
Q Consensus 322 a~~~gillIvD~t~a~~----~--~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-----~~~G~- 389 (466)
|++||+++|+||++... . ...-...-.|+++ +.|.++|.- ...|.+++++++.+.+.... ...+.
T Consensus 250 c~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T 326 (461)
T PRK07482 250 LKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLIT--VAKGLTSAY-APLSGSIVGEKVWDVLEQGSDEHGAIGHGWT 326 (461)
T ss_pred HHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEE--EccccccCc-cccceeeecHHHHHHHhcccccCCccccCCC
Confidence 99999999999995421 1 1222233468888 589998742 12466677888877664210 01121
Q ss_pred -CchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHH----HcCCCcEEEeCCC
Q 012321 390 -ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKIL----EAHPKVKRVHYPG 437 (466)
Q Consensus 390 -~ls~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L----~~~p~V~~V~~Pg 437 (466)
.-+|..+..++..|+.+.. .+++..+..++|.+.| +++|.|..|.-.|
T Consensus 327 ~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~G 381 (461)
T PRK07482 327 YSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVG 381 (461)
T ss_pred CCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeece
Confidence 2356666665555555432 2334444444444444 4577776665544
No 322
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.19 E-value=2.2e-09 Score=110.19 Aligned_cols=215 Identities=22% Similarity=0.305 Sum_probs=151.1
Q ss_pred HHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc---cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 012321 214 VVEEKMSALEGAE--STVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 214 ~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all---~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~L 288 (466)
.++..+++|.|.+ ++=++-.++++-.+++++.- .+.++++++..+|+.+...++...+.+|+++..++..|.+++
T Consensus 124 efQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l 203 (450)
T COG0403 124 EFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDL 203 (450)
T ss_pred HHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhh
Confidence 4477889999974 56667777765566555542 335899999999999999998888999999999998899999
Q ss_pred HHhccCCCceEEEEeCCCCCCc-ccccHHHHHHHHHhcCCEEEEeCC-CCCCCccchhccCCcEEEeccccc-----ccc
Q 012321 289 EAALNNNNVSLFFTESPTNPFL-RCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATKF-----IGG 361 (466)
Q Consensus 289 e~ai~~~~tklV~lesPsNPtG-~v~dl~~I~ela~~~gillIvD~t-~a~~~~~~pl~~gaDivv~S~sK~-----lgG 361 (466)
+++ ++..+..|+++.|+ -.| ...|+.+|.+.+|++|+++++=.- .+-.++..|.++|+||++.+..-+ |||
T Consensus 204 ~~~-~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGG 281 (450)
T COG0403 204 ESA-DDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGG 281 (450)
T ss_pred hhc-cccCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCC
Confidence 988 54348999999999 567 677899999999999988776432 344567888999999999998864 566
Q ss_pred ccCceEEEEEeChHHHHHH----------------------------HHHHHHhCCCchH------HHHHHHHHhhHHHH
Q 012321 362 HNDVLAGSISGSGKLVTQI----------------------------RNLHHVLGGALNP------NAAYLIIRGMKTLH 407 (466)
Q Consensus 362 ~gdv~gG~vvg~~eli~~l----------------------------~~~~~~~G~~ls~------~~A~l~lrgL~tl~ 407 (466)
|. +|+...++++..++ |+-+...+.+.++ ...|+..-|-+-+.
T Consensus 282 Ph---ag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk 358 (450)
T COG0403 282 PH---AGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLK 358 (450)
T ss_pred cc---eeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHH
Confidence 64 68877666554332 2211111212111 12233333444444
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcEEE
Q 012321 408 LRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 408 ~R~e~~~~na~~La~~L~~~p~V~~V 433 (466)
..-++..+.+..+++.|++......+
T Consensus 359 ~iA~r~~~~a~~la~~L~~~~~g~~~ 384 (450)
T COG0403 359 EIAERIHRLAAYLAAGLKEIGAGVEL 384 (450)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCceEe
Confidence 44456677888999999976643333
No 323
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.19 E-value=3.7e-09 Score=112.42 Aligned_cols=228 Identities=12% Similarity=0.175 Sum_probs=139.5
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHH-HH--------
Q 012321 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIF-IE-------- 267 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~~~-~~-------- 267 (466)
+.++...+|.++|+++.. .+.+.+++||++|+..++..... + ..+||.....|++.... +.
T Consensus 89 ~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~ 168 (445)
T PRK09221 89 MGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNR 168 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhh
Confidence 457888889999999874 36788899999999988874321 1 35788888888773211 10
Q ss_pred hhcccCCcEEEEeCCC------------------CHHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHHH
Q 012321 268 TVLPKMGITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 268 ~~l~~~gi~v~~vd~~------------------D~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~ela 322 (466)
.........+..++.. ..+++++.++ .+++.+|++|......|.+.+ +++|.++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc 248 (445)
T PRK09221 169 KMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREIC 248 (445)
T ss_pred hccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHH
Confidence 0000000111122111 1346666664 134889999998887888887 99999999
Q ss_pred HhcCCEEEEeCCCCCC----Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH-------HHHhCC
Q 012321 323 HKKGAIVCIDGTFATP----LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGG 389 (466)
Q Consensus 323 ~~~gillIvD~t~a~~----~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~-------~~~~G~ 389 (466)
+++|+++|+||++... .. ..-.....|++ +++|.+++.. ...|.+++++++++.+..- ......
T Consensus 249 ~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~--~~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 325 (445)
T PRK09221 249 DKHGILLIFDEVITGFGRLGAAFAAERFGVTPDII--TFAKGLTNGA-IPMGAVIASDEIYDAFMQGPEYAIEFFHGYTY 325 (445)
T ss_pred HHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEE--EeccccccCc-ccceeeEEcHHHHHhhccCcccccccccccCC
Confidence 9999999999996421 11 11122234766 5789997642 1246678888888776421 111112
Q ss_pred CchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHc---CCCcEEEeCCC
Q 012321 390 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA---HPKVKRVHYPG 437 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~La~~L~~---~p~V~~V~~Pg 437 (466)
..+|..+..++..|+.+. ..+++..+..+++.+.|++ +|.|..|+.-|
T Consensus 326 ~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~G 378 (445)
T PRK09221 326 SAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIG 378 (445)
T ss_pred CcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCc
Confidence 235666555555555543 2345666666667666654 35555554443
No 324
>PRK05965 hypothetical protein; Provisional
Probab=99.19 E-value=7.3e-09 Score=110.57 Aligned_cols=229 Identities=18% Similarity=0.194 Sum_probs=138.1
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHHHHhh------c
Q 012321 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETV------L 270 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~~~~~~~------l 270 (466)
+.++...+|.++|.++.. .+.+.+.+||++|+..++..... + ..+||.....|++.......+ -
T Consensus 87 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~ 166 (459)
T PRK05965 87 FGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFH 166 (459)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhh
Confidence 456777889999998864 35677778999999998875321 2 357888888888743211011 0
Q ss_pred ccCCc---EEEEeCC---------CC--------HHHHHHhccC---CCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 012321 271 PKMGI---TATVIDP---------AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 271 ~~~gi---~v~~vd~---------~D--------~e~Le~ai~~---~~tklV~lesPsNPtG~v~d----l~~I~ela~ 323 (466)
..++. .+..++. .| ++++++.+.. +++.+|++|......|.+.+ +++|.++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~ 246 (459)
T PRK05965 167 RGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACR 246 (459)
T ss_pred cccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHH
Confidence 01111 0111210 12 2567777742 34899999988766676653 789999999
Q ss_pred hcCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-----HHhC--CC
Q 012321 324 KKGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLG--GA 390 (466)
Q Consensus 324 ~~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-----~~~G--~~ 390 (466)
+||+++|.||++.. +.+ ..-...-.||++ +.|.++|.- +..|.+++++++++.+..-. ...+ ..
T Consensus 247 ~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~ 323 (459)
T PRK05965 247 ELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT--VAKGLTSGY-VPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYS 323 (459)
T ss_pred HcCCEEEEechhccCccCchhhhHhhcCCCCCeEE--echhhccCC-cceeEEEEcHHHHHHHhccccccccccccCCCC
Confidence 99999999999642 111 222233468887 579998752 23677788888887764210 0112 22
Q ss_pred chHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCcEEEeCCCC
Q 012321 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA---HPKVKRVHYPGL 438 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L~~---~p~V~~V~~PgL 438 (466)
-+|..+..++..|+.+.. .+++..+...+|.+.|++ +|.|..|+--|+
T Consensus 324 gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl 376 (459)
T PRK05965 324 AHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGL 376 (459)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecce
Confidence 456666666655655532 234444445555555543 565655554443
No 325
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.18 E-value=9.6e-10 Score=125.66 Aligned_cols=158 Identities=20% Similarity=0.274 Sum_probs=121.3
Q ss_pred HHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHh-ccCC--CEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHH
Q 012321 212 TVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL-VPAG--GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 212 ~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~al-l~pG--D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e 286 (466)
..+++..+++|.|. +++-++.+++++..++++++ +.+| |+|++++..|+.+...+...++..|++++.++..+.+
T Consensus 150 l~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~ 229 (993)
T PLN02414 150 LLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD 229 (993)
T ss_pred HHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc
Confidence 56678899999997 46778888888888877766 4544 7899999999999888877788899999988753322
Q ss_pred HHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCC--CCccchhccCCcEEEecccccc-----
Q 012321 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLVLHSATKFI----- 359 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~--~~~~~pl~~gaDivv~S~sK~l----- 359 (466)
...+ .+..+++..|+ .+|.+.|+++|+++||++|+++++ .+... .....|-++|+||++.+.+||.
T Consensus 230 ----~~~~-~v~~vlvq~P~-~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~ 302 (993)
T PLN02414 230 ----YSSG-DVCGVLVQYPA-TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGY 302 (993)
T ss_pred ----cccC-ceEEEEEecCC-CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCC
Confidence 2222 25566666665 589999999999999999999999 44322 2223577899999999999998
Q ss_pred ccccCceEEEEEeChHHHHH
Q 012321 360 GGHNDVLAGSISGSGKLVTQ 379 (466)
Q Consensus 360 gG~gdv~gG~vvg~~eli~~ 379 (466)
|||. +|++..++++.+.
T Consensus 303 GGP~---aGflavr~~~~r~ 319 (993)
T PLN02414 303 GGPH---AAFLATSQEYKRL 319 (993)
T ss_pred CCCC---eeEEEECHHHHhh
Confidence 5553 6899888876553
No 326
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.18 E-value=5.2e-09 Score=111.70 Aligned_cols=234 Identities=19% Similarity=0.208 Sum_probs=139.7
Q ss_pred CccCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchH-HHHHhh-c---c-
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETV-L---P- 271 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~-~~~~~~-l---~- 271 (466)
+...++.++...+|.++|+++.+. +.+.+.+||++|+..++.... ....+||.....|++.. ..+... . .
T Consensus 105 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 184 (459)
T PRK06082 105 FSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQ 184 (459)
T ss_pred CccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCccccc
Confidence 333466788899999999999853 567788899999998886432 23467888888777743 222110 0 0
Q ss_pred cCC---cEEEEeC--------CCC--------HHHHHHhccC-CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCE
Q 012321 272 KMG---ITATVID--------PAD--------MEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAI 328 (466)
Q Consensus 272 ~~g---i~v~~vd--------~~D--------~e~Le~ai~~-~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gil 328 (466)
.++ -.+..++ ..+ ++.+++.++. .++.+|++|...+..+.+.+ +++|.++|++||++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~l 264 (459)
T PRK06082 185 GMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVL 264 (459)
T ss_pred CCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 000 0111121 111 2457777752 24889999988765444455 89999999999999
Q ss_pred EEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh
Q 012321 329 VCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (466)
Q Consensus 329 lIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg 402 (466)
+|+||++.. +.. ........||++ ++|.+++.. ...|.+++++++...............+|..+..++..
T Consensus 265 lI~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~-~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~ 341 (459)
T PRK06082 265 LIIDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGGGL-VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALAT 341 (459)
T ss_pred EEEechhhCCCccchhhHhHhhCCCCCEEE--ecccccCCC-CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHH
Confidence 999999642 111 122223468887 799999752 23567777777654322100011123456666655555
Q ss_pred hHHHHH--HHHHHHHHHHHHHHHHHc----CCCcEEEeCCCC
Q 012321 403 MKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGL 438 (466)
Q Consensus 403 L~tl~~--R~e~~~~na~~La~~L~~----~p~V~~V~~PgL 438 (466)
|+.+.. .+++..+..++|.+.|++ +|.|..|..-|+
T Consensus 342 L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 383 (459)
T PRK06082 342 IEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGL 383 (459)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccc
Confidence 555432 344555555555555543 566666665554
No 327
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.18 E-value=2.7e-09 Score=110.87 Aligned_cols=222 Identities=20% Similarity=0.260 Sum_probs=146.8
Q ss_pred CCCccCCCCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhc------
Q 012321 200 ASFEYGRYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL------ 270 (466)
Q Consensus 200 ~~~~Y~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~aAi~~al~al--l~pGD~VLv~~~~y~~t~~~~~~~l------ 270 (466)
.+..|+. +++.--.+.+.|.++.+. |..-+++||++|...+++.. ....|+|+..+.+|++....+-.-.
T Consensus 84 ~G~~fg~-Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t 162 (432)
T COG0001 84 RGLSFGA-PTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAAT 162 (432)
T ss_pred hcCCCCC-CCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCccc
Confidence 3566765 344445667788888876 88999999999988887643 2446899999999988654331110
Q ss_pred ----ccCCc------EEEEeCCCCHHHHHHhccCC--CceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCC
Q 012321 271 ----PKMGI------TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 271 ----~~~gi------~v~~vd~~D~e~Le~ai~~~--~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t 334 (466)
...|+ .+..++-+|++.+++++++. ++.+|++|-.-.-.|.+.+ +++|.++|+++|++||.||+
T Consensus 163 ~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEV 242 (432)
T COG0001 163 LGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEV 242 (432)
T ss_pred CCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecc
Confidence 11123 23345667999999998764 5899999887766777665 78999999999999999999
Q ss_pred CCCC-----CccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHH-hCCCc--hHHHHHHHHHhhHHH
Q 012321 335 FATP-----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-LGGAL--NPNAAYLIIRGMKTL 406 (466)
Q Consensus 335 ~a~~-----~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~-~G~~l--s~~~A~l~lrgL~tl 406 (466)
.... -.|.....-.|+. .+.|.+||.- ..|++-+++++++.+...... .++++ +|......+..++.+
T Consensus 243 iTGFR~~~gGaq~~~gi~PDlt--tlGKiIGGGl--P~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l 318 (432)
T COG0001 243 ITGFRVALGGAQGYYGVEPDLT--TLGKIIGGGL--PIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEEL 318 (432)
T ss_pred hhhcccCCcccccccCcCcchh--hhhhhhcCCc--ceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHH
Confidence 5321 1233333345655 4789999763 678999999999876543322 12222 333333333333333
Q ss_pred HH---HHHHHHHHHHHHHHHHHc
Q 012321 407 HL---RVQQQNSTALRMAKILEA 426 (466)
Q Consensus 407 ~~---R~e~~~~na~~La~~L~~ 426 (466)
.. -.++..+.+++|.+.|++
T Consensus 319 ~~~~~~y~~l~~~~~~L~~gl~~ 341 (432)
T COG0001 319 MTEEGVYERLDALGERLAEGLRA 341 (432)
T ss_pred HhcccHHHHHHHHHHHHHHHHHH
Confidence 32 356666777777777665
No 328
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.17 E-value=8.2e-10 Score=108.67 Aligned_cols=181 Identities=16% Similarity=0.223 Sum_probs=117.4
Q ss_pred CccCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHH-HHHHHHHHHhc---cCCC--EEEEc-CCCccchHHH-H-Hhh
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALV---PAGG--HIVTT-TDCYRKTRIF-I-ETV 269 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~-aAi~~al~all---~pGD--~VLv~-~~~y~~t~~~-~-~~~ 269 (466)
|.-.....+..++|.+.+.+.+|. ++.+.+|+|+ .+.+.++..+. ..|+ +|+.+ .|.|-+.-.. + ...
T Consensus 70 Y~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~ 149 (417)
T COG3977 70 YDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDL 149 (417)
T ss_pred CCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccc
Confidence 444444466778888888888886 6899999999 55555554332 3354 35443 5666552211 0 011
Q ss_pred cccCCcEEEEeC------CCCHHHHHHhccCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCc
Q 012321 270 LPKMGITATVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN 340 (466)
Q Consensus 270 l~~~gi~v~~vd------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~---dl~~I~ela~~~gillIvD~t~a~~~~ 340 (466)
+-...-++..++ ..|.++|. +.+ .+.+|.+..|+||||.+. ++.+|.++|++||++|++|++|+.|++
T Consensus 150 fVs~kP~iel~~~g~FKY~vDF~~l~--i~e-~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP 226 (417)
T COG3977 150 FVSAKPNIELLPAGQFKYHVDFEHLH--IGE-STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFP 226 (417)
T ss_pred eeeccCCcccccccceeeccCHHHcc--ccc-ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCC
Confidence 111111111111 23566664 445 389999999999999987 477888899999999999999998765
Q ss_pred cc------hhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHh
Q 012321 341 QK------ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL 387 (466)
Q Consensus 341 ~~------pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~ 387 (466)
.- ++-...-+.+.|+||. |-+| .+.|++++++++++.+..+....
T Consensus 227 ~iifsd~~~~w~~NiilC~SLSK~-GLPG-~R~GIiIane~viqaitnmn~ii 277 (417)
T COG3977 227 GIIFSDATPLWNENIILCMSLSKL-GLPG-SRCGIIIANEKVIQAITNMNGII 277 (417)
T ss_pred ceecccccccCCCCEEEEeehhhc-CCCC-cceeEEEccHHHHHHHHhcccee
Confidence 22 2222234788999995 4444 47899999999999887665543
No 329
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.16 E-value=1.1e-08 Score=108.68 Aligned_cols=224 Identities=14% Similarity=0.134 Sum_probs=135.4
Q ss_pred CCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHH-HHHhh-----cc---
Q 012321 206 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRI-FIETV-----LP--- 271 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g---~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~-~~~~~-----l~--- 271 (466)
.+.++...+|.++|.++.+ .+.+.+++||++|+..++.... ...++|+.....|++... .+... ..
T Consensus 93 ~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 172 (441)
T PRK05769 93 DFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGF 172 (441)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCC
Confidence 3567888899999998875 3677788999999998887432 234678888888877432 22110 00
Q ss_pred -cCCcEEEEeCC----------CC--------HHHHHH-hc----cCCCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 012321 272 -KMGITATVIDP----------AD--------MEGLEA-AL----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 272 -~~gi~v~~vd~----------~D--------~e~Le~-ai----~~~~tklV~lesPsNPtG~v~d----l~~I~ela~ 323 (466)
...-.+..++. .+ .+.+++ .+ ...++.+|++|......|.+.+ +++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~ 252 (441)
T PRK05769 173 FPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLAD 252 (441)
T ss_pred CCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH
Confidence 00001222221 11 233555 22 2235899999988877888887 999999999
Q ss_pred hcCCEEEEeCCCCCC----Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-HHhCCCchHHHH
Q 012321 324 KKGAIVCIDGTFATP----LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGALNPNAA 396 (466)
Q Consensus 324 ~~gillIvD~t~a~~----~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-~~~G~~ls~~~A 396 (466)
++|+++|+||++... .. ........|+++ ++|.+++. ..+|++++++++++.+...+ ..++ .+|..+
T Consensus 253 ~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt--~~K~l~~G--~p~gav~~~~~i~~~~~~~~~~T~~--g~p~~~ 326 (441)
T PRK05769 253 KYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIIT--LAKAIAGG--LPLGAVIGRAELMFLPPGSHANTFG--GNPVAA 326 (441)
T ss_pred HcCCEEEEechhhCCCcccceehhhccCCCCCEEE--EcccccCC--cccEEEEEehhhhhcCCCCCCCCCC--cCHHHH
Confidence 999999999997531 11 111122358775 68999864 35678888888765332111 1122 255555
Q ss_pred HHHHHhhHHHH-HHHHHHHHHHHHHHHHHHc----CCCcEEEeC
Q 012321 397 YLIIRGMKTLH-LRVQQQNSTALRMAKILEA----HPKVKRVHY 435 (466)
Q Consensus 397 ~l~lrgL~tl~-~R~e~~~~na~~La~~L~~----~p~V~~V~~ 435 (466)
..++..|+.+. ..+++..+..++|.+.|++ +|.+..|..
T Consensus 327 aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg 370 (441)
T PRK05769 327 AAALATLEELEEGLLENAQKLGEYLRKELKELKEKYEFIGDVRG 370 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeec
Confidence 55555555443 2344555555666665543 565555543
No 330
>PRK07678 aminotransferase; Validated
Probab=99.16 E-value=8.8e-09 Score=109.68 Aligned_cols=228 Identities=14% Similarity=0.178 Sum_probs=137.8
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHHHHHhh--------
Q 012321 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV-------- 269 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~aAi~~al~all~-------pG-D~VLv~~~~y~~t~~~~~~~-------- 269 (466)
+.++...+|.++|.++.+. +.+.+.+||++|+..++..... +| .+||.....|++........
T Consensus 86 ~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~ 165 (451)
T PRK07678 86 QSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKY 165 (451)
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCccccc
Confidence 5677888999999998865 3566778999999988875421 23 57888888887743211111
Q ss_pred -cccCCcEEEEeCCC--------------C---HHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHHHHh
Q 012321 270 -LPKMGITATVIDPA--------------D---MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (466)
Q Consensus 270 -l~~~gi~v~~vd~~--------------D---~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~ela~~ 324 (466)
.....-.+..++.. | ++.+++.++ ..++.+|++|....-.|.+.+ +++|.++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~ 245 (451)
T PRK07678 166 KYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQK 245 (451)
T ss_pred ccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 00000011112110 1 223555563 235899999987766676654 8999999999
Q ss_pred cCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH------HHHhCCCch
Q 012321 325 KGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL------HHVLGGALN 392 (466)
Q Consensus 325 ~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~------~~~~G~~ls 392 (466)
||+++|+||++.. +-+ .+-...-.||++ +.|.+++.. ...|.+++++++++.+... ........+
T Consensus 246 ~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt--~gK~lggG~-~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gn 322 (451)
T PRK07678 246 HGALLISDEVICGFGRTGKAFGFMNYGVKPDIIT--MAKGITSAY-LPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGN 322 (451)
T ss_pred cCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEE--eecccccCC-cceeEEEEcHHHHHHHhccCcccccccCCCCCcC
Confidence 9999999999632 211 122233468885 689998753 3467888899988777531 111112345
Q ss_pred HHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHH----HcCCCcEEEeCCC
Q 012321 393 PNAAYLIIRGMKTLHL--RVQQQNSTALRMAKIL----EAHPKVKRVHYPG 437 (466)
Q Consensus 393 ~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L----~~~p~V~~V~~Pg 437 (466)
|..+..++..|+.+.. .+++..+..++|.+.| +++|.|..|..-|
T Consensus 323 p~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~G 373 (451)
T PRK07678 323 PAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKG 373 (451)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeec
Confidence 6666666656655532 3344444545554444 4567666665443
No 331
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.15 E-value=9.3e-09 Score=108.84 Aligned_cols=228 Identities=14% Similarity=0.152 Sum_probs=139.7
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccch-HHHHHhh-----
Q 012321 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKT-RIFIETV----- 269 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t-~~~~~~~----- 269 (466)
.+.++...+|.++|.++.. .+.+.+.+||++|+..++..... + ..+||.....|++. ...+...
T Consensus 83 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 162 (429)
T PRK06173 83 GFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTG 162 (429)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchh
Confidence 3457788889999998864 36788889999999988875431 2 35788888888773 2111100
Q ss_pred c-ccCC---cEEEEeCC-----------CCHHHHHHhcc--CCCceEEEEeCC-CCCCcccc-c---HHHHHHHHHhcCC
Q 012321 270 L-PKMG---ITATVIDP-----------ADMEGLEAALN--NNNVSLFFTESP-TNPFLRCV-D---VKLVSDLCHKKGA 327 (466)
Q Consensus 270 l-~~~g---i~v~~vd~-----------~D~e~Le~ai~--~~~tklV~lesP-sNPtG~v~-d---l~~I~ela~~~gi 327 (466)
. ..++ -.+.+++. .+++.|++.+. ..++.+|++|.. ..-.|.+. + +++|.++|++||+
T Consensus 163 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~ 242 (429)
T PRK06173 163 MHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGV 242 (429)
T ss_pred hhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCC
Confidence 0 0000 01122221 13566777774 235899999985 55556553 3 7899999999999
Q ss_pred EEEEeCCCCCCCc-------cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH---HHhC--CCchHHH
Q 012321 328 IVCIDGTFATPLN-------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLG--GALNPNA 395 (466)
Q Consensus 328 llIvD~t~a~~~~-------~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~---~~~G--~~ls~~~ 395 (466)
++|+||++ +++. ........||++ ++|.++|. -+..+.+++++++++.+.... ...+ ...+|..
T Consensus 243 llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~ 318 (429)
T PRK06173 243 LLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKALTGG-YLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLA 318 (429)
T ss_pred eEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhhhCC-ccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHH
Confidence 99999997 3321 111222357776 89999653 223577788888887764210 1122 1245666
Q ss_pred HHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCcEEEeCCC
Q 012321 396 AYLIIRGMKTLHL--RVQQQNSTALRMAKILEA---HPKVKRVHYPG 437 (466)
Q Consensus 396 A~l~lrgL~tl~~--R~e~~~~na~~La~~L~~---~p~V~~V~~Pg 437 (466)
+..++..|+.+.. .+++..++.++|.+.|++ +|.|..|+..|
T Consensus 319 ~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~G 365 (429)
T PRK06173 319 CAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLG 365 (429)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccc
Confidence 6666666665542 356666677777777763 45555444443
No 332
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.15 E-value=1.4e-09 Score=113.98 Aligned_cols=209 Identities=20% Similarity=0.235 Sum_probs=132.5
Q ss_pred HHHHHHHHHhhhCCCcE--EEeCCHHHHHHHHHHH---hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHH
Q 012321 212 TVVVEEKMSALEGAEST--VIMASGMSASTVMLLA---LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e~~--v~~~SG~aAi~~al~a---ll~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e 286 (466)
.-+++..++++.|.+-+ =+...++++-.+++++ .-+.+++|+++...|+.+...++..+...|+++..++..+..
T Consensus 112 lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~ 191 (429)
T PF02347_consen 112 LFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDG 191 (429)
T ss_dssp HHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTC
T ss_pred HHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccC
Confidence 45678999999998743 3455555433333333 334456999999999999888887788889999887743211
Q ss_pred HHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC--CCCCCccchhccCCcEEEecccccccccc-
Q 012321 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT--FATPLNQKALSLGADLVLHSATKFIGGHN- 363 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t--~a~~~~~~pl~~gaDivv~S~sK~lgG~g- 363 (466)
... ++ ++..|++++|+ -.|.+.|+++|++++|++|+++++ .+ -+-..+..|-++|+||++.+ +|.||.|-
T Consensus 192 ~~d---~~-~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~ 264 (429)
T PF02347_consen 192 TTD---DD-DTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMG 264 (429)
T ss_dssp SB----ST-TEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---C
T ss_pred Ccc---cc-CeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCC
Confidence 111 34 59999999998 589999999999999999999987 55 23345688999999999877 77765221
Q ss_pred --CceEEEEEeChHHHHHHH----------------------------HHHH--HhCCC--chH--HHHHHHHHhhHHHH
Q 012321 364 --DVLAGSISGSGKLVTQIR----------------------------NLHH--VLGGA--LNP--NAAYLIIRGMKTLH 407 (466)
Q Consensus 364 --dv~gG~vvg~~eli~~l~----------------------------~~~~--~~G~~--ls~--~~A~l~lrgL~tl~ 407 (466)
+-..|++.++++++.++- +.+. ++++. +-. ...|+++.|-+-|.
T Consensus 265 ~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~ 344 (429)
T PF02347_consen 265 FGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLR 344 (429)
T ss_dssp CC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHH
Confidence 113688887776554431 1110 11111 111 23566666777777
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 012321 408 LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 408 ~R~e~~~~na~~La~~L~~~ 427 (466)
..-++...++.++++.|++.
T Consensus 345 ~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 345 EIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp HHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 77788899999999999986
No 333
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.14 E-value=1.5e-08 Score=108.00 Aligned_cols=229 Identities=14% Similarity=0.175 Sum_probs=137.1
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc-------cC-CCEEEEcCCCccchHHHHHhhc-----
Q 012321 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PA-GGHIVTTTDCYRKTRIFIETVL----- 270 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all-------~p-GD~VLv~~~~y~~t~~~~~~~l----- 270 (466)
.+.++...+|.++|+++.+. +.+.+++||++|+..++.... .+ ..+||.....|++.......+-
T Consensus 93 ~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~ 172 (453)
T PRK06943 93 GCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALF 172 (453)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhh
Confidence 34677888999999998764 467888999999999887542 12 3679988888887431110000
Q ss_pred ----ccCCcEEEEeCC-----------------CCHHHHHHhccC--CCceEEEEeC-CCCCCccccc----HHHHHHHH
Q 012321 271 ----PKMGITATVIDP-----------------ADMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 271 ----~~~gi~v~~vd~-----------------~D~e~Le~ai~~--~~tklV~les-PsNPtG~v~d----l~~I~ela 322 (466)
...-..+..++. .+++++++.+.. .++.+|++|. +..-.|.+.+ +++|.++|
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc 252 (453)
T PRK06943 173 KDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALC 252 (453)
T ss_pred hcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHH
Confidence 000001111211 124667777742 3589999998 3555566543 78999999
Q ss_pred HhcCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH----HHhCC--C
Q 012321 323 HKKGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLGG--A 390 (466)
Q Consensus 323 ~~~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~----~~~G~--~ 390 (466)
++||+++|+||++.. +.+ ......-.||++ +.|.++|. -...|.+++++++.+.+..-. ...+. .
T Consensus 253 ~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt--~gKgl~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~ 329 (453)
T PRK06943 253 DRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC--LSKGISGG-YLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYT 329 (453)
T ss_pred HHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEe--eehhhccC-cccceEEEEcHHHHHhhcccCccCCccCCCCCC
Confidence 999999999999542 111 122233468887 48999864 123677788888887764210 01121 2
Q ss_pred chHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCcEEEeCCC
Q 012321 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA---HPKVKRVHYPG 437 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L~~---~p~V~~V~~Pg 437 (466)
-+|..+..++.-|+.+.. .+++..+..++|.+.|++ +|.|..|.--|
T Consensus 330 gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~G 381 (453)
T PRK06943 330 GNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLRQRG 381 (453)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccc
Confidence 356666555555555432 234444555555555543 56565555443
No 334
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.12 E-value=7.8e-09 Score=110.03 Aligned_cols=195 Identities=13% Similarity=0.116 Sum_probs=117.6
Q ss_pred CCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcc---c----C
Q 012321 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP---K----M 273 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l~---~----~ 273 (466)
.+.++...+|.++|.++.+. +.+.+++||++|+..++.... ....+||.....|++.......+-. . +
T Consensus 93 ~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 172 (451)
T PRK06918 93 VMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGF 172 (451)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccC
Confidence 34578888999999998753 467888999999998887432 2345788888888774322111100 0 0
Q ss_pred C---cEEEEeCCCC-----------------HHHHHHhc----cCCCceEEEEeCCCCCCccccc----HHHHHHHHHhc
Q 012321 274 G---ITATVIDPAD-----------------MEGLEAAL----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (466)
Q Consensus 274 g---i~v~~vd~~D-----------------~e~Le~ai----~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~ 325 (466)
+ -.+..++..+ .+.+++.+ ..+++.+|++|....-.|.+.+ +++|.++|++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~ 252 (451)
T PRK06918 173 GPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH 252 (451)
T ss_pred CCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc
Confidence 0 0122221100 12333333 2335889999776544465442 78999999999
Q ss_pred CCEEEEeCCCCCCC----ccchhccC--CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHH
Q 012321 326 GAIVCIDGTFATPL----NQKALSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI 399 (466)
Q Consensus 326 gillIvD~t~a~~~----~~~pl~~g--aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~ 399 (466)
|+++|.||++.... ......++ .|++ +++|.+++ | ...|++++++++++.+...........+++.+..+
T Consensus 253 gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa 328 (451)
T PRK06918 253 GILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLGA-G-VPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAA 328 (451)
T ss_pred CCEEEEeccccCcCccCceehhHhcCCCCCEE--eeehhhcC-C-CccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHH
Confidence 99999999975321 11111223 5744 79999984 4 46789999999888765332222223455555554
Q ss_pred HHhhH
Q 012321 400 IRGMK 404 (466)
Q Consensus 400 lrgL~ 404 (466)
+..++
T Consensus 329 ~a~l~ 333 (451)
T PRK06918 329 LAVLD 333 (451)
T ss_pred HHHHH
Confidence 44444
No 335
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.12 E-value=1.5e-08 Score=107.13 Aligned_cols=226 Identities=15% Similarity=0.149 Sum_probs=132.5
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHHHHhhcc-----
Q 012321 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLP----- 271 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~~~~~~~l~----- 271 (466)
+.++...+|.++|+++.+ .+.+.+++||++|+..++..... + ..+||.....|++.......+..
T Consensus 80 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~ 159 (422)
T PRK05630 80 LTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGM 159 (422)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccc
Confidence 456778899999998864 36788899999999988875321 2 25788888888773221111100
Q ss_pred --cCC---cEEEEeCC--------CC----HHHHHHhccCCCceEEEEeCC-CCCCcccc-c---HHHHHHHHHhcCCEE
Q 012321 272 --KMG---ITATVIDP--------AD----MEGLEAALNNNNVSLFFTESP-TNPFLRCV-D---VKLVSDLCHKKGAIV 329 (466)
Q Consensus 272 --~~g---i~v~~vd~--------~D----~e~Le~ai~~~~tklV~lesP-sNPtG~v~-d---l~~I~ela~~~gill 329 (466)
.++ -.+.+++. .+ .+.+++.+.+ ++.+|++|.. ..-.|.+. | +++|.++|++||+++
T Consensus 160 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~ll 238 (422)
T PRK05630 160 HSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILL 238 (422)
T ss_pred cccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 000 01112211 11 2345555554 4899999974 55556543 2 789999999999999
Q ss_pred EEeCCCCCCCc-------cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH----HHhC--CCchHHHH
Q 012321 330 CIDGTFATPLN-------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLG--GALNPNAA 396 (466)
Q Consensus 330 IvD~t~a~~~~-------~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~----~~~G--~~ls~~~A 396 (466)
|+||++. ++. ......-.||+ ++.|.++|.- ..+|++++++++.+.+.... ...+ ...+|..+
T Consensus 239 I~DEv~t-G~GrtG~~~a~~~~gv~PDi~--t~gK~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~ 314 (422)
T PRK05630 239 IADEIAT-GFGRTGELFATLAAGVTPDIM--CVGKALTGGF-MSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLAC 314 (422)
T ss_pred EEeccee-CCCcCchhhHHHhcCCCCCee--eeechhhcCc-cccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHH
Confidence 9999963 221 11112235777 6799996531 13688888988887764210 0111 12456665
Q ss_pred HHHHHhhHHHHH--HHHHHHHHHHHHHHHHH---cCCCcEEEeCCC
Q 012321 397 YLIIRGMKTLHL--RVQQQNSTALRMAKILE---AHPKVKRVHYPG 437 (466)
Q Consensus 397 ~l~lrgL~tl~~--R~e~~~~na~~La~~L~---~~p~V~~V~~Pg 437 (466)
..++..++.+.. ..++..+...++.+.|+ ++|.|..|+.-|
T Consensus 315 aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~G 360 (422)
T PRK05630 315 AVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGVADVRVLG 360 (422)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccc
Confidence 555555554432 23444555555555444 345455444433
No 336
>PRK07480 putative aminotransferase; Validated
Probab=99.12 E-value=1.9e-08 Score=107.24 Aligned_cols=228 Identities=16% Similarity=0.192 Sum_probs=133.5
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHHH-HHhh-----
Q 012321 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIF-IETV----- 269 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~-------pG-D~VLv~~~~y~~t~~~-~~~~----- 269 (466)
.+.++...+|.++|+++.+. +.+.+++||++|+..++..... +| .+||.....|++.... +...
T Consensus 90 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~ 169 (456)
T PRK07480 90 KTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYM 169 (456)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhh
Confidence 35678889999999998753 6788899999999988875421 23 4688888888773211 1000
Q ss_pred cccCCc---EEEEeCCC---------C--------HHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHHH
Q 012321 270 LPKMGI---TATVIDPA---------D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 270 l~~~gi---~v~~vd~~---------D--------~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~ela 322 (466)
-...+. .+..++.. + .+.+++.+. ..++.+|++|....-.|.+.+ +++|.++|
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc 249 (456)
T PRK07480 170 HEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRIC 249 (456)
T ss_pred hcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 000110 11112210 1 255555442 134899999988766677664 89999999
Q ss_pred HhcCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHH-HH-HHhC--CCch
Q 012321 323 HKKGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LH-HVLG--GALN 392 (466)
Q Consensus 323 ~~~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~-~~-~~~G--~~ls 392 (466)
++||+++|+||++.. +.. ..-...-.||++ ++|.++|.- ...|.+++++++++.+.. .. ...+ ...+
T Consensus 250 ~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gn 326 (456)
T PRK07480 250 RKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT--IAKGLTSGY-IPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGH 326 (456)
T ss_pred HHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee--eehhhccCC-ccceEEEEcHHHHHHHhcCCCCcccCCCCCcC
Confidence 999999999999632 211 122222357765 689998741 124667778888877631 11 0111 1235
Q ss_pred HHHHHHHHHhhHHHHH--HHHHH-HHHHHHHHHHHH---cCCCcEEEeCC
Q 012321 393 PNAAYLIIRGMKTLHL--RVQQQ-NSTALRMAKILE---AHPKVKRVHYP 436 (466)
Q Consensus 393 ~~~A~l~lrgL~tl~~--R~e~~-~~na~~La~~L~---~~p~V~~V~~P 436 (466)
|..+..++..|+.+.. .+++. .+..++|.+.|+ ++|.|..|.--
T Consensus 327 pl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~ 376 (456)
T PRK07480 327 PVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLRELADHPLVGEVRGV 376 (456)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEee
Confidence 6666666555555432 22333 234444444443 45555555433
No 337
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.12 E-value=1.5e-08 Score=106.76 Aligned_cols=166 Identities=13% Similarity=0.125 Sum_probs=108.8
Q ss_pred CchhHHHHHHHHHhhh--C--CC-cEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhh------cccC
Q 012321 208 GNPTTVVVEEKMSALE--G--AE-STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV------LPKM 273 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~--g--~e-~~v~~-~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~------l~~~ 273 (466)
.++...+|.++|+++. + .. ...++ +||++|+..++.... ....+||.....|++........ -..+
T Consensus 76 ~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~ 155 (412)
T TIGR02407 76 ATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGA 155 (412)
T ss_pred CcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCC
Confidence 4677788888888864 2 22 34554 799999999887543 23467888888887743221111 0111
Q ss_pred C---cEEEEeCC--------CCHHHHHHhccC-----CCceEEEEeCCCCCCcccc-c---HHHHHHHHHhcCCEEEEeC
Q 012321 274 G---ITATVIDP--------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 274 g---i~v~~vd~--------~D~e~Le~ai~~-----~~tklV~lesPsNPtG~v~-d---l~~I~ela~~~gillIvD~ 333 (466)
+ ..+..++. .+++.+++.+++ .++.+|++|...+..|.+. + +++|.++|+++|+++|+||
T Consensus 156 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 235 (412)
T TIGR02407 156 GVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDD 235 (412)
T ss_pred CCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1 12233332 236678887752 2478999999988888754 3 7899999999999999999
Q ss_pred CCCCC------CccchhccCCcEEEeccccccccccCceEEEEEeChHH
Q 012321 334 TFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 376 (466)
Q Consensus 334 t~a~~------~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~el 376 (466)
++... +.........|+++ ++|.+++.| ...|++++++++
T Consensus 236 V~tG~GRtG~~~a~~~~~v~PDi~~--~~K~lg~~G-~pigav~~~~~~ 281 (412)
T TIGR02407 236 IQAGCGRTGTFFSFEPAGIEPDIVC--LSKSISGYG-LPLALTLIKPEL 281 (412)
T ss_pred hhhCCCccchhHHhcccCCCCCEEE--echhccCCc-cceeEEEEchhh
Confidence 97521 11222334568775 679998744 457888887775
No 338
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.11 E-value=2.8e-08 Score=105.99 Aligned_cols=225 Identities=16% Similarity=0.144 Sum_probs=133.8
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc-----ccCCc---
Q 012321 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PKMGI--- 275 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l-----~~~gi--- 275 (466)
.++...+|.++|+++.+. +.+.+++||++|+..++.... ....+||.....|++.......+. .+.+.
T Consensus 94 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 173 (457)
T PRK05639 94 HSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPL 173 (457)
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCC
Confidence 357778899999988753 578888999999998887542 334578888888877332111110 00010
Q ss_pred --EEEEeCCC-------------CH--------HHHHHhc-----cCCCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 012321 276 --TATVIDPA-------------DM--------EGLEAAL-----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 276 --~v~~vd~~-------------D~--------e~Le~ai-----~~~~tklV~lesPsNPtG~v~d----l~~I~ela~ 323 (466)
.+..++.. +. +.+++.+ ...++.+|++|......|.+.+ +++|.++|+
T Consensus 174 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~ 253 (457)
T PRK05639 174 MPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLD 253 (457)
T ss_pred CCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 12222211 12 2345443 1335899999988766676553 789999999
Q ss_pred hcCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHH
Q 012321 324 KKGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAY 397 (466)
Q Consensus 324 ~~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~ 397 (466)
+||+++|+||++.. +.. ......-.||++ ++|.+++. ...|++++++++++.... ........+|..+.
T Consensus 254 ~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG--~pi~av~~~~~i~~~~~~-~~~~T~~g~p~~~a 328 (457)
T PRK05639 254 EHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVASG--MGLSGVIGRKELMDLTSG-SALLTPAANPVISA 328 (457)
T ss_pred HcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcCC--CcceeEEehHHHHhhcCC-CcccCCCcCHHHHH
Confidence 99999999999652 111 122223468888 79999864 235788888888773211 11111234566555
Q ss_pred HHHHhhHHHHH--HHHHHHHHHHHHHHHHHc----CCCcEEEeCCC
Q 012321 398 LIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPG 437 (466)
Q Consensus 398 l~lrgL~tl~~--R~e~~~~na~~La~~L~~----~p~V~~V~~Pg 437 (466)
.++..|+.+.. .+++..+..++|.+.|++ +|.+..|...|
T Consensus 329 aa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~G 374 (457)
T PRK05639 329 AAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKG 374 (457)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccce
Confidence 55555554432 234444455555555543 66666554443
No 339
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.11 E-value=1.4e-08 Score=107.93 Aligned_cols=228 Identities=12% Similarity=0.157 Sum_probs=137.8
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHH-HHH--------
Q 012321 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRI-FIE-------- 267 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~~-~~~-------- 267 (466)
..+|...+|.++|+++.. .+.+.+++||++|+..++..... + ..+||.....|++... .+.
T Consensus 86 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~ 165 (442)
T PRK13360 86 MGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNR 165 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhh
Confidence 357888899999999874 36788899999999988874321 2 3579988888877321 110
Q ss_pred hhcccCCcEEEEeCCC------------------CHHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHHH
Q 012321 268 TVLPKMGITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 268 ~~l~~~gi~v~~vd~~------------------D~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~ela 322 (466)
.........+.+++.. ..+++++.+. ..++.+|++|......|.+.+ +++|.++|
T Consensus 166 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc 245 (442)
T PRK13360 166 KAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREIC 245 (442)
T ss_pred hccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 0001000111222111 1356777774 234889999998877888887 99999999
Q ss_pred HhcCCEEEEeCCCC-CCC---c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH-------HHHhCC
Q 012321 323 HKKGAIVCIDGTFA-TPL---N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGG 389 (466)
Q Consensus 323 ~~~gillIvD~t~a-~~~---~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~-------~~~~G~ 389 (466)
+++|+++|+||++. .+- . ..-.....|++ +++|.+++.. ...|.+++++++++.+..- ......
T Consensus 246 ~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--t~gK~l~gG~-~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~ 322 (442)
T PRK13360 246 DKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLL--TCAKGLTNGA-IPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTY 322 (442)
T ss_pred HHcCCEEEEechhhCCCCCccchhhhhcCCCCcee--eeeeccccCc-cceEEEEEcHHHHHHhhcCCccccccccCCCC
Confidence 99999999999963 211 1 11122235776 5799998642 2245677888888766421 111111
Q ss_pred CchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHH---cCCCcEEEeCCC
Q 012321 390 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILE---AHPKVKRVHYPG 437 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~La~~L~---~~p~V~~V~~Pg 437 (466)
..+|..+..++..|+.+. ..+++..+..+++.+.|+ ++|.|..|+--|
T Consensus 323 ~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~G 375 (442)
T PRK13360 323 SGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLG 375 (442)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccc
Confidence 235665555555555443 133444555555656555 355555554333
No 340
>PRK07481 hypothetical protein; Provisional
Probab=99.11 E-value=2.9e-08 Score=105.72 Aligned_cols=228 Identities=13% Similarity=0.122 Sum_probs=135.2
Q ss_pred CCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHH-HHHhh----c
Q 012321 207 YGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRI-FIETV----L 270 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g---~e~~v~~~SG~aAi~~al~all~-------pG-D~VLv~~~~y~~t~~-~~~~~----l 270 (466)
..++...+|.++|.++.+ .+.+.+++||++|+..++..... +| .+||.....|++... .+... .
T Consensus 83 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 162 (449)
T PRK07481 83 TTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVF 162 (449)
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccc
Confidence 467888899999999873 35678889999999988875321 23 578888888887332 11100 0
Q ss_pred ----cc--CCcEEEEeC------C--CCHHH--------HHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHH
Q 012321 271 ----PK--MGITATVID------P--ADMEG--------LEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (466)
Q Consensus 271 ----~~--~gi~v~~vd------~--~D~e~--------Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~el 321 (466)
.. .|+.....+ . .|++. +++.|. ++++.+|++|....-.|.+.+ +++|.++
T Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l 242 (449)
T PRK07481 163 RRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV 242 (449)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence 00 122111000 0 13333 344442 235899999988766676554 8999999
Q ss_pred HHhcCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-----HHhCCC
Q 012321 322 CHKKGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGA 390 (466)
Q Consensus 322 a~~~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-----~~~G~~ 390 (466)
|+++|+++|.||++.. +.. ......-.||++ +.|.+++.- +..|.+++++++++.+.... ...+.+
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T 319 (449)
T PRK07481 243 CDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMC--LAKGITSGY-VPLGATMVNARIADAFEANADFGGAIMHGYT 319 (449)
T ss_pred HHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEE--EeecccCCC-cCceEEEEcHHHHHHHhccCccccccccCCC
Confidence 9999999999999542 111 122223468877 589998641 23577888888887765311 011212
Q ss_pred --chHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc----CCCcEEEeCCC
Q 012321 391 --LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPG 437 (466)
Q Consensus 391 --ls~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L~~----~p~V~~V~~Pg 437 (466)
-+|..+..++..|+.+.. .+++..+..++|.+.|++ +|.|..|+.-|
T Consensus 320 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G 374 (449)
T PRK07481 320 YSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKG 374 (449)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecc
Confidence 356655555555554432 234444445555544443 56666665444
No 341
>PRK06149 hypothetical protein; Provisional
Probab=99.10 E-value=2.2e-08 Score=115.83 Aligned_cols=230 Identities=15% Similarity=0.179 Sum_probs=138.5
Q ss_pred CCCCchhHHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCccchH-HHHHh--hc---cc--
Q 012321 205 GRYGNPTTVVVEEKMSALE--GAESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTR-IFIET--VL---PK-- 272 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~--g~e~~v~~~SG~aAi~~al~al--l~pGD~VLv~~~~y~~t~-~~~~~--~l---~~-- 272 (466)
+++.++...+|.++|+++. +.+.+++++||++|+..++... .....+||..+..|++.. ..... .. ..
T Consensus 619 ~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~ 698 (972)
T PRK06149 619 SRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQAL 698 (972)
T ss_pred ccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCcccccccc
Confidence 4566788899999999987 3478889999999999988732 123356777777777632 11100 00 00
Q ss_pred ----CCcEEEEe--------CCCC-----HHHHHHhcc-----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcC
Q 012321 273 ----MGITATVI--------DPAD-----MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKG 326 (466)
Q Consensus 273 ----~gi~v~~v--------d~~D-----~e~Le~ai~-----~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~g 326 (466)
.++..... ...+ .+++++.++ ..++.+|++|......|.+.+ +++|.++|++||
T Consensus 699 ~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g 778 (972)
T PRK06149 699 ETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARG 778 (972)
T ss_pred CCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcC
Confidence 01111100 0011 233333332 234889999988777787777 899999999999
Q ss_pred CEEEEeCCCC-CCCccc------hhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHh-CCCchHHHHHH
Q 012321 327 AIVCIDGTFA-TPLNQK------ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL-GGALNPNAAYL 398 (466)
Q Consensus 327 illIvD~t~a-~~~~~~------pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~-G~~ls~~~A~l 398 (466)
+++|+||++. .+-... -.....||+ +++|.+++. ...|++++++++++.+......+ ....+|..+..
T Consensus 779 ~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK~lg~G--~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aa 854 (972)
T PRK06149 779 GVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMGNG--HPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRI 854 (972)
T ss_pred CEEEEEeehhcCCccCccchhhhhcCCCCCEE--EecccccCC--eeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHH
Confidence 9999999963 211111 112236887 579999864 35688899999888775311111 12356777766
Q ss_pred HHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCcEEEeCCCC
Q 012321 399 IIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPGL 438 (466)
Q Consensus 399 ~lrgL~tl~~--R~e~~~~na~~La~~L~----~~p~V~~V~~PgL 438 (466)
++..|+.+.. ..++..+...+|.+.|+ ++|.|..|+--|+
T Consensus 855 ala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl 900 (972)
T PRK06149 855 GMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGL 900 (972)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecce
Confidence 6666665532 12233333344444443 4676766654443
No 342
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.10 E-value=1.2e-09 Score=108.78 Aligned_cols=161 Identities=19% Similarity=0.242 Sum_probs=116.6
Q ss_pred HHHHHHHHHhhhCC-C-cEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccch-HHHHHhhcccCCcEEEEeCCCCHH
Q 012321 212 TVVVEEKMSALEGA-E-STVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKT-RIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 212 ~~~Lee~lA~l~g~-e-~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t-~~~~~~~l~~~gi~v~~vd~~D~e 286 (466)
-+.|-.+|+.+.|+ + ++++..+-+.-++.++.+.+ .+|+.||+++..-.++ +...+.+....++..+..-.+.++
T Consensus 78 p~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~ 157 (407)
T COG3844 78 PERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPR 157 (407)
T ss_pred hhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChH
Confidence 46778889999997 3 44444444455666666654 4588888877544333 333333344444432222234678
Q ss_pred HHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEeccccccccccCc
Q 012321 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDV 365 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK~lgG~gdv 365 (466)
+++++++++ +.+|++.+.+--||...|+.+|.+++|++|++++-|-+++.+.. .+.-..|+|+-+.+.+||++|..+.
T Consensus 158 ~~~~~~~dd-~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGa 236 (407)
T COG3844 158 ALEEAITDD-VAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGA 236 (407)
T ss_pred HHHHhhccc-eEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCC
Confidence 999999986 99999999998899999999999999999999999999877644 4444669999999999999877666
Q ss_pred eEEEEEeC
Q 012321 366 LAGSISGS 373 (466)
Q Consensus 366 ~gG~vvg~ 373 (466)
.+|+.+.+
T Consensus 237 pa~l~v~~ 244 (407)
T COG3844 237 PAGLFVAP 244 (407)
T ss_pred ceeEEecc
Confidence 67766654
No 343
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.09 E-value=1e-08 Score=108.42 Aligned_cols=167 Identities=15% Similarity=0.122 Sum_probs=108.1
Q ss_pred CCchhHHHHHHHHHhhhC----CC-cEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCccchH-HHHHhh-----ccc
Q 012321 207 YGNPTTVVVEEKMSALEG----AE-STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETV-----LPK 272 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g----~e-~~v~~-~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~-~~~~~~-----l~~ 272 (466)
+.++...+|.++|+++.. .+ ...++ +||++|+..++.... ....+||.....|++.. ..+... -..
T Consensus 79 ~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~ 158 (425)
T PRK09264 79 MHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQG 158 (425)
T ss_pred cCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccC
Confidence 356777888888888642 23 34454 699999998887542 23467888888887743 222110 011
Q ss_pred CCc---EEEEeCC--------CCHHHHHHhccC-----CCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEe
Q 012321 273 MGI---TATVIDP--------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 273 ~gi---~v~~vd~--------~D~e~Le~ai~~-----~~tklV~lesPsNPtG~v~----dl~~I~ela~~~gillIvD 332 (466)
++. .+..++. .|++++++.+++ .++.+|++|......|.+. .+++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (425)
T PRK09264 159 AGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVD 238 (425)
T ss_pred CCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEe
Confidence 111 2333332 367788888752 2478999998887677644 4899999999999999999
Q ss_pred CCCCCC------CccchhccCCcEEEeccccccccccCceEEEEEeChHH
Q 012321 333 GTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 376 (466)
Q Consensus 333 ~t~a~~------~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~el 376 (466)
|++... +.........|++ +++|.+++.| ...|++++++++
T Consensus 239 EV~tG~GrtG~~~~~~~~~v~PDi~--t~~K~l~~~G-~pigav~~~~~i 285 (425)
T PRK09264 239 DIQAGCGRTGTFFSFERAGITPDIV--TLSKSISGYG-LPMALVLIKPEL 285 (425)
T ss_pred chhhCCccccHHHHHhhcCCCCCEE--EeccccCCCc-cceEEEEEchhh
Confidence 997531 1112223346766 4579998755 456788887775
No 344
>PRK06062 hypothetical protein; Provisional
Probab=99.09 E-value=2.6e-08 Score=106.15 Aligned_cols=234 Identities=15% Similarity=0.133 Sum_probs=140.9
Q ss_pred CccCCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchH-HHHHhhc-c---c
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETVL-P---K 272 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~-~~~~~~l-~---~ 272 (466)
+....+.++...+|.++|.++.. .+.+.+++||++|+..++.... ....+||.....|++.. ..+...- . .
T Consensus 87 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~ 166 (451)
T PRK06062 87 TVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWP 166 (451)
T ss_pred CcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCccccc
Confidence 33345678888999999999874 3678888999999999887532 23467888888887743 2221100 0 0
Q ss_pred -----CCcEEEEeC---------CCC-------HHHHHHhccC---CCceEEEEeCCCCCCccccc----HHHHHHHHHh
Q 012321 273 -----MGITATVID---------PAD-------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (466)
Q Consensus 273 -----~gi~v~~vd---------~~D-------~e~Le~ai~~---~~tklV~lesPsNPtG~v~d----l~~I~ela~~ 324 (466)
.++.....+ ..| ++.+++.++. +++.+|++|......|.+.+ +++|.++|++
T Consensus 167 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~ 246 (451)
T PRK06062 167 NDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDR 246 (451)
T ss_pred CCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 122111000 012 5667777742 34889999988777788877 9999999999
Q ss_pred cCCEEEEeCCCCCC----Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhC--CCchHHHH
Q 012321 325 KGAIVCIDGTFATP----LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--GALNPNAA 396 (466)
Q Consensus 325 ~gillIvD~t~a~~----~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G--~~ls~~~A 396 (466)
+|+++|+||++... .. ..-.....|+++ +.|.+++.- +..|.+++++++++.+.......+ ...+|..+
T Consensus 247 ~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t--~gK~lggG~-~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~ 323 (451)
T PRK06062 247 HGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLIT--FAKGVNSGY-VPLGGVAISEAIAATFADRPYPGGLTYSGHPLAC 323 (451)
T ss_pred cCCEEEeeccccCCCcCcHHHHHHhcCCCCCeee--echhhhcCC-cCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHH
Confidence 99999999996531 11 121222357664 789998741 124667777888877653111111 12346666
Q ss_pred HHHHHhhHHHHH--HHHHHHHHH-HHHHHHH----HcCCCcEEEeCCCC
Q 012321 397 YLIIRGMKTLHL--RVQQQNSTA-LRMAKIL----EAHPKVKRVHYPGL 438 (466)
Q Consensus 397 ~l~lrgL~tl~~--R~e~~~~na-~~La~~L----~~~p~V~~V~~PgL 438 (466)
..++..|+.+.. .+++..+.. ++|.+.| +++|.|..|..-|+
T Consensus 324 Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl 372 (451)
T PRK06062 324 AAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGV 372 (451)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEecccc
Confidence 666666655532 223333332 2333333 34676666665554
No 345
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.08 E-value=6.6e-09 Score=117.76 Aligned_cols=159 Identities=22% Similarity=0.309 Sum_probs=123.5
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh-c--cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHH
Q 012321 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-V--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~al-l--~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e 286 (466)
.-.++..+++|.|.+ ++-++..++++..+++++. . +++++|++++.+|+.+...++..++..|+++..+| .+
T Consensus 111 l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~---~~ 187 (939)
T TIGR00461 111 LLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD---CS 187 (939)
T ss_pred HHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc---HH
Confidence 445688899999986 5577778887666666664 2 23489999999999998888777888899988774 46
Q ss_pred HHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC-CCCCccchhccCCcEEEecccccc-----c
Q 012321 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFI-----G 360 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~-a~~~~~~pl~~gaDivv~S~sK~l-----g 360 (466)
+|++.+ + +..|++.+|+ -+|.+.|+++|++++|++|++++++.-. +..++..|-++|+||++.+..++- |
T Consensus 188 ~l~~~~--~-~~~v~~q~Pn-~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~G 263 (939)
T TIGR00461 188 DIKKAV--D-VFGCLLQYPA-TDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYG 263 (939)
T ss_pred HHhhcC--C-EEEEEEECCC-CCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCC
Confidence 677666 2 7899998887 5899999999999999999999996653 334567889999999988777653 3
Q ss_pred cccCceEEEEEeChHHHHHH
Q 012321 361 GHNDVLAGSISGSGKLVTQI 380 (466)
Q Consensus 361 G~gdv~gG~vvg~~eli~~l 380 (466)
||+ +|++..++++..++
T Consensus 264 GP~---aG~~a~~~~l~r~l 280 (939)
T TIGR00461 264 GPH---AAFFAVKDEYNRKM 280 (939)
T ss_pred CCc---eeeeeecHhhHhhC
Confidence 554 78888877766553
No 346
>PRK07036 hypothetical protein; Provisional
Probab=99.07 E-value=4.9e-08 Score=104.46 Aligned_cols=227 Identities=14% Similarity=0.171 Sum_probs=135.5
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHHHHhhccc----
Q 012321 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLPK---- 272 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~~~~~~~l~~---- 272 (466)
..++...+|.++|.++.. .+.+.+++||++|+..++..... + ..+||.....|++.......+-..
T Consensus 92 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~ 171 (466)
T PRK07036 92 MTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADR 171 (466)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCccc
Confidence 467788889999998864 35677889999999988875321 2 257888888887743221111000
Q ss_pred --CC---cEEEEeCCCC-----------------HHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 012321 273 --MG---ITATVIDPAD-----------------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 273 --~g---i~v~~vd~~D-----------------~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~ela~ 323 (466)
++ -.+..++..+ .+.+++.+. .+++.+|++|......|.+.+ +++|.++|+
T Consensus 172 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~ 251 (466)
T PRK07036 172 TEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICR 251 (466)
T ss_pred ccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHH
Confidence 00 0112221110 234455453 235899999988776777765 899999999
Q ss_pred hcCCEEEEeCCCCCC-----Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH---H--HHhC--C
Q 012321 324 KKGAIVCIDGTFATP-----LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---H--HVLG--G 389 (466)
Q Consensus 324 ~~gillIvD~t~a~~-----~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~---~--~~~G--~ 389 (466)
+||+++|+||++... ++ +.......||++ +.|.+++.- +..|.+++++++++.+... . ...+ .
T Consensus 252 ~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 328 (466)
T PRK07036 252 RYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLTSGY-QPLGAVIISERLLDVISGPNAKGNVFTHGFTY 328 (466)
T ss_pred HcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--EccccccCc-cccEEEEEcHHHHHHHhcccCcCcccccCCCC
Confidence 999999999996321 11 112223467775 689998641 1257777888888876531 0 0111 1
Q ss_pred CchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH---cCCCcEEEeCC
Q 012321 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE---AHPKVKRVHYP 436 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L~---~~p~V~~V~~P 436 (466)
..+|..+..++..|+.+.. .+++..+..++|.+.|+ ++|.|..|.-.
T Consensus 329 ~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~ 380 (466)
T PRK07036 329 SGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGD 380 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 2356666666666665532 34455555555555554 34555555433
No 347
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.07 E-value=2e-08 Score=106.37 Aligned_cols=215 Identities=12% Similarity=0.164 Sum_probs=136.3
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHH-HHh-hcc---------
Q 012321 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIF-IET-VLP--------- 271 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~-~~~-~l~--------- 271 (466)
..++...+|.++|.++.+. +.+.+++||++|+..++.... ....+|+.....|++.... +.. .+.
T Consensus 90 ~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~ 169 (433)
T PRK00615 90 LTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTH 169 (433)
T ss_pred CCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCC
Confidence 4567788888888888754 478888999999998887543 2235788888778773211 100 000
Q ss_pred cC-----CcEEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCC-
Q 012321 272 KM-----GITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL- 339 (466)
Q Consensus 272 ~~-----gi~v~~vd~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~- 339 (466)
.. .-....++..|++++++.+.. .++.+|++|......|.+.+ +++|.++|++||+++|+||++. ++
T Consensus 170 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~R 248 (433)
T PRK00615 170 LVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GFR 248 (433)
T ss_pred CCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-ccc
Confidence 00 001122344578888888742 24789999988777787776 5699999999999999999973 22
Q ss_pred ---c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH-HhCCC--chHHHHHHHHHhhHHHH--HH
Q 012321 340 ---N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGA--LNPNAAYLIIRGMKTLH--LR 409 (466)
Q Consensus 340 ---~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~-~~G~~--ls~~~A~l~lrgL~tl~--~R 409 (466)
. ..-.....|+++ ++|.+++. ..+|++++++++++.+..... ..+.+ .+|..+..++..|+.+. ..
T Consensus 249 ~G~~ga~~~~gv~PDi~~--~gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~ 324 (433)
T PRK00615 249 VAQGGAAAIYHVKPDITV--YGKILGGG--LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGF 324 (433)
T ss_pred ccHhHHHHhcCCCCCeEE--EcccccCC--cceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccH
Confidence 1 111122357765 79999864 347899999999888753211 12222 36666666555555443 13
Q ss_pred HHHHHHHHHHHHHHHHc
Q 012321 410 VQQQNSTALRMAKILEA 426 (466)
Q Consensus 410 ~e~~~~na~~La~~L~~ 426 (466)
+++..++.+++.+.|++
T Consensus 325 ~~~~~~~g~~l~~~l~~ 341 (433)
T PRK00615 325 YTQLSTLEQNFLSPIEE 341 (433)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45555555666444443
No 348
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.07 E-value=4.6e-09 Score=109.16 Aligned_cols=205 Identities=14% Similarity=0.145 Sum_probs=133.6
Q ss_pred hhHHHHHHHHHhhhCCC--c--EEEeCCHHHHHHHHHHHhc-cCCCEEEEcCCCccchHHHHHhhcccCCc-EEEEeC--
Q 012321 210 PTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGI-TATVID-- 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e--~--~v~~~SG~aAi~~al~all-~pGD~VLv~~~~y~~t~~~~~~~l~~~gi-~v~~vd-- 281 (466)
....++++.|.++++.+ . .++.+||+.++.+++.+++ ++||+|++.. .|+. ++....++.+|+ +++.++
T Consensus 39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~--r~~~eia~~~g~~~v~~l~~~ 115 (374)
T TIGR01365 39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGK--GWVTDVTKQLKLPDVRVLEAE 115 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHH--HHHHHHHHhcCCCCcEEEcCC
Confidence 44566688888888852 2 3446888999999999999 5899888754 4443 233355666777 355554
Q ss_pred ---CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccc
Q 012321 282 ---PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKF 358 (466)
Q Consensus 282 ---~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~ 358 (466)
..|+++++. ++ . |++.+--..||...|+++|.+.. +++++|||.+-+.+...-..+ ++|+++.|..|.
T Consensus 116 ~g~~~~~~~ve~--~~---~-v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d-~iDv~~tgsQK~ 186 (374)
T TIGR01365 116 YGKLPDLKKVDF--KN---D-VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH-KLDVVTFSWQKV 186 (374)
T ss_pred CCCCCCHHHcCC--CC---C-EEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh-HCcEEEEechhc
Confidence 346777762 22 2 33434444579999997666332 589999999854432211222 499999999999
Q ss_pred cccccCceEEEEEeChHHHHHHHHHH------H-------------Hh-CC---CchHHHHHHHHHhhH------HHHHH
Q 012321 359 IGGHNDVLAGSISGSGKLVTQIRNLH------H-------------VL-GG---ALNPNAAYLIIRGMK------TLHLR 409 (466)
Q Consensus 359 lgG~gdv~gG~vvg~~eli~~l~~~~------~-------------~~-G~---~ls~~~A~l~lrgL~------tl~~R 409 (466)
|+++++ .++++.+++.++++.... . .. +. +.+-+.-+.+++.++ .++.|
T Consensus 187 L~~ppG--ls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~ 264 (374)
T TIGR01365 187 LGGEGA--HGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPL 264 (374)
T ss_pred cCCCCc--eEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHH
Confidence 999983 478888888776655210 0 01 11 112222333333332 37788
Q ss_pred HHHHHHHHHHHHHHHHcCC
Q 012321 410 VQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 410 ~e~~~~na~~La~~L~~~p 428 (466)
.++|.++++.+.+++++.+
T Consensus 265 ~~Rh~~~a~~l~~~l~~lg 283 (374)
T TIGR01365 265 IARADDNLAVLEAFVAKNN 283 (374)
T ss_pred HHHHHHHHHHHHHHHHHCC
Confidence 9999999999999998876
No 349
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.06 E-value=2.8e-08 Score=105.11 Aligned_cols=217 Identities=13% Similarity=0.114 Sum_probs=132.0
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHHHHhhcc-----
Q 012321 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLP----- 271 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~~~~~~~l~----- 271 (466)
..++...++.++|+++.+. +.+.++.||++|+..++..... + ..+||.....|.+.......+..
T Consensus 85 ~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~ 164 (427)
T TIGR00508 85 FTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSM 164 (427)
T ss_pred cCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccc
Confidence 4567778888889888754 5788889999999888875431 2 35788888888874322211100
Q ss_pred --cCC--c-EEEEeC-----------CCCHHHHHHhccC--CCceEEEEeCC-CCCCccc----ccHHHHHHHHHhcCCE
Q 012321 272 --KMG--I-TATVID-----------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRC----VDVKLVSDLCHKKGAI 328 (466)
Q Consensus 272 --~~g--i-~v~~vd-----------~~D~e~Le~ai~~--~~tklV~lesP-sNPtG~v----~dl~~I~ela~~~gil 328 (466)
.++ . .+..++ ..|.+++++.+.. .++.+|++|.. .+-.|.. ..+++|.++|+++|++
T Consensus 165 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~l 244 (427)
T TIGR00508 165 HSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDIL 244 (427)
T ss_pred cccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000 0 011111 1145667777642 24789999975 4444432 3589999999999999
Q ss_pred EEEeCCCCCCCc-------cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH---HHhC--CCchHHHH
Q 012321 329 VCIDGTFATPLN-------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLG--GALNPNAA 396 (466)
Q Consensus 329 lIvD~t~a~~~~-------~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~---~~~G--~~ls~~~A 396 (466)
+|+||++. ++. ..-.....||++ ++|.++|. -...+.+++++++++.++... ...+ ...+|..+
T Consensus 245 lI~DEv~t-G~Gr~G~~~~~~~~~v~pDi~~--~gK~l~gG-~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~ 320 (427)
T TIGR00508 245 LIADEIAT-GFGRTGKLFACEHAGVVPDILC--VGKALTGG-YMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLAC 320 (427)
T ss_pred EEEecccc-CCCcCCccchhhhcCCCCCEEE--echhhhcC-cccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHH
Confidence 99999963 221 111223467776 79999653 234678888889888876321 0111 12356655
Q ss_pred HHHHHhhHHHH--HHHHHHHHHHHHHHHHHHcC
Q 012321 397 YLIIRGMKTLH--LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 397 ~l~lrgL~tl~--~R~e~~~~na~~La~~L~~~ 427 (466)
..++..++.+. ...++..++..+|.+.|++.
T Consensus 321 aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l 353 (427)
T TIGR00508 321 AVAEASLAILLEGEWQKQVSAIENQLKRELSPL 353 (427)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 55555554432 23456666677777766653
No 350
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.05 E-value=4.2e-08 Score=105.03 Aligned_cols=229 Identities=14% Similarity=0.163 Sum_probs=133.1
Q ss_pred CCchhHHHHHHHHHhhhCC-------CcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHHHHhhc-
Q 012321 207 YGNPTTVVVEEKMSALEGA-------ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVL- 270 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~-------e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~~~~~~~l- 270 (466)
+.++...+|.++|.++... +.+.+.+||++|+..++..... + ..+||.....|++........-
T Consensus 104 ~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~ 183 (472)
T PRK08742 104 FTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGD 183 (472)
T ss_pred cCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccC
Confidence 4577788999999987642 4678889999999988875421 2 3678888888877432111110
Q ss_pred --------ccCCcEEEEeCCC-----------------CHHHHHHhcc--CCCceEEEEeC-CCCCCccccc----HHHH
Q 012321 271 --------PKMGITATVIDPA-----------------DMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKLV 318 (466)
Q Consensus 271 --------~~~gi~v~~vd~~-----------------D~e~Le~ai~--~~~tklV~les-PsNPtG~v~d----l~~I 318 (466)
...-..+.+++.. +++.+++.++ ..++.+|++|. ..+-.|.+.+ +++|
T Consensus 184 ~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~l 263 (472)
T PRK08742 184 IPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRA 263 (472)
T ss_pred CcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHH
Confidence 0000011122211 2456666664 23589999987 4555565543 7899
Q ss_pred HHHHHhcCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH----HHhC
Q 012321 319 SDLCHKKGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLG 388 (466)
Q Consensus 319 ~ela~~~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~----~~~G 388 (466)
.++|+++|+++|.||++.. +.+ ......-.||++ +.|.++|.- ...|.+++++++++.+.... ...+
T Consensus 264 r~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~--~gKgl~gG~-~Plaav~~~~ei~~~~~~~~~~~~~~h~ 340 (472)
T PRK08742 264 RELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLC--LSKGLTGGF-LPLSAVLATQQLYDAFLDDSRERAFLHS 340 (472)
T ss_pred HHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEE--EcccccCCC-CCcceeeccHHHHHHhhccCccCccCcC
Confidence 9999999999999999542 211 222223468887 489998641 13577778888887664210 0112
Q ss_pred CC--chHHHHHHHHHhhHHHHH-----HHHHHHHHHHHHHHHHHcCCCcEEEeCCCC
Q 012321 389 GA--LNPNAAYLIIRGMKTLHL-----RVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 389 ~~--ls~~~A~l~lrgL~tl~~-----R~e~~~~na~~La~~L~~~p~V~~V~~PgL 438 (466)
.+ -+|..+..++..|+.+.. +.++.-+....+.+.++++|.|..|+.-||
T Consensus 341 ~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl 397 (472)
T PRK08742 341 HSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQIGEHPHVADVRQAGM 397 (472)
T ss_pred CCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccce
Confidence 22 356655555555544322 222222222233334455676666665543
No 351
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.04 E-value=3.8e-08 Score=105.37 Aligned_cols=214 Identities=16% Similarity=0.203 Sum_probs=135.7
Q ss_pred CchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHH-hh---c-----c-cCC
Q 012321 208 GNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIE-TV---L-----P-KMG 274 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g-~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~-~~---l-----~-~~g 274 (466)
.++...+|.++|.+... .+.+.+++||++|+..++.... ...++||.....|++....+. .. . . ..+
T Consensus 137 ~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g 216 (474)
T PLN02482 137 PCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPG 216 (474)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCC
Confidence 45667788888888764 4778889999999998887542 234678888888888432111 00 0 0 112
Q ss_pred c------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc--
Q 012321 275 I------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-- 340 (466)
Q Consensus 275 i------~v~~vd~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~~-- 340 (466)
+ .+..++..|++.+++.++. .++.+|++|......|.+.+ +++|.++|++||+++|+||++. ++.
T Consensus 217 ~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR~g 295 (474)
T PLN02482 217 VPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFRIA 295 (474)
T ss_pred CCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CeecC
Confidence 2 2233455688999988853 24889999988777787765 6789999999999999999973 221
Q ss_pred ----cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-HHhCCC--chHHHHHHHHHhhHHHH--HHHH
Q 012321 341 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGA--LNPNAAYLIIRGMKTLH--LRVQ 411 (466)
Q Consensus 341 ----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-~~~G~~--ls~~~A~l~lrgL~tl~--~R~e 411 (466)
+.......|++ ++.|.++|. ...|.+++++++++.+.... ...+++ .+|..+..++..|+.+. ...+
T Consensus 296 ~~ga~~~~gv~PDi~--t~gK~lggG--~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~ 371 (474)
T PLN02482 296 YGGAQEYFGITPDLT--TLGKVIGGG--LPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYE 371 (474)
T ss_pred cchHhHHhCCCCCEE--EecchhhCC--CceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHH
Confidence 11122235775 579999864 23566689999988775211 112222 34554444444444442 2445
Q ss_pred HHHHHHHHHHHHHHc
Q 012321 412 QQNSTALRMAKILEA 426 (466)
Q Consensus 412 ~~~~na~~La~~L~~ 426 (466)
+..+..++|.+.|++
T Consensus 372 ~~~~~g~~l~~~L~~ 386 (474)
T PLN02482 372 YLDKITKKLIQGILE 386 (474)
T ss_pred HHHHHHHHHHHHHHH
Confidence 555566666665544
No 352
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.02 E-value=7.4e-08 Score=102.99 Aligned_cols=226 Identities=13% Similarity=0.092 Sum_probs=130.6
Q ss_pred CCCchhHHHHHHHHHhhhCCC-----cEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc----c--
Q 012321 206 RYGNPTTVVVEEKMSALEGAE-----STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL----P-- 271 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~e-----~~v~~-~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l----~-- 271 (466)
.+.+|...+|.++|.++...+ ..+++ +||++|+..++.... ....+||.....|++.......+- .
T Consensus 102 ~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~ 181 (464)
T PRK06938 102 DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKK 181 (464)
T ss_pred ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccc
Confidence 356788888888888876422 34455 599999999887542 234678888888877432211110 0
Q ss_pred cCC---cEEEEeCCC-----------------CHHHHHHhccC-----CCceEEEEeCCCCCCccccc----HHHHHHHH
Q 012321 272 KMG---ITATVIDPA-----------------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 272 ~~g---i~v~~vd~~-----------------D~e~Le~ai~~-----~~tklV~lesPsNPtG~v~d----l~~I~ela 322 (466)
.++ -.+.+++.. +.+.+++.+++ .++.+|++|....-.|.+.+ +++|.++|
T Consensus 182 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc 261 (464)
T PRK06938 182 PLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRIT 261 (464)
T ss_pred cCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 000 012222211 25667777753 14899999887655566543 78999999
Q ss_pred HhcCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCC--CchHH
Q 012321 323 HKKGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPN 394 (466)
Q Consensus 323 ~~~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~--~ls~~ 394 (466)
+++|+++|.||++.. +.+ ......-.||++ +.|.++|. ...|.+++++++ +.+... ..+. .-+|.
T Consensus 262 ~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gKglggG--~PlsAv~~~~~~-~~~~~~--~~~~T~~gnpl 334 (464)
T PRK06938 262 EEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVV--LSKAIGGS--LPLAVVVYREWL-DTWQPG--AHAGTFRGNQM 334 (464)
T ss_pred HHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEE--eeccccCC--CceEEEeehhHh-hccCCC--CCCCCCCcCHH
Confidence 999999999999542 211 222223468887 58999864 446777777664 433211 1121 23556
Q ss_pred HHHHHHHhhHHHHH--HHHHHHHHHHHHHHHH----HcCCCcEEEeCCCC
Q 012321 395 AAYLIIRGMKTLHL--RVQQQNSTALRMAKIL----EAHPKVKRVHYPGL 438 (466)
Q Consensus 395 ~A~l~lrgL~tl~~--R~e~~~~na~~La~~L----~~~p~V~~V~~PgL 438 (466)
.+..++..|+.+.. .+++..+..++|.+.| +++|.|..|+-.||
T Consensus 335 a~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl 384 (464)
T PRK06938 335 AMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGL 384 (464)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence 55555555554432 1233333334444433 34676666665543
No 353
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.02 E-value=4.4e-08 Score=104.64 Aligned_cols=228 Identities=15% Similarity=0.150 Sum_probs=135.7
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHHHHhhcc-----
Q 012321 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLP----- 271 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~~~~~~~l~----- 271 (466)
+.++...+|.++|+++... +.+.+++||++|+..++..... + ..+||.....|++.......+-.
T Consensus 96 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~ 175 (460)
T PRK06916 96 LANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFH 175 (460)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccc
Confidence 3567788999999998753 5788889999999988875432 3 36788888888874321111100
Q ss_pred -cCC---cEEEEeCC-----------------CCHHHHHHhcc--CCCceEEEEeC-CCCCCcccc-c---HHHHHHHHH
Q 012321 272 -KMG---ITATVIDP-----------------ADMEGLEAALN--NNNVSLFFTES-PTNPFLRCV-D---VKLVSDLCH 323 (466)
Q Consensus 272 -~~g---i~v~~vd~-----------------~D~e~Le~ai~--~~~tklV~les-PsNPtG~v~-d---l~~I~ela~ 323 (466)
.++ ..+..++. .+++++++.++ .+++.+|++|. +..-.|.+. + +++|.++|+
T Consensus 176 ~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~ 255 (460)
T PRK06916 176 QVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCT 255 (460)
T ss_pred cccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHH
Confidence 000 01111110 12456666664 23589999998 465556554 3 789999999
Q ss_pred hcCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH----HH-HhCC--C
Q 012321 324 KKGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HH-VLGG--A 390 (466)
Q Consensus 324 ~~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~----~~-~~G~--~ 390 (466)
++|+++|+||++.. +.. ......-.||++ +.|.++|.- +..|.+++++++++.+..- .. ..+. .
T Consensus 256 ~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~--~gK~l~gG~-~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~ 332 (460)
T PRK06916 256 KYNVLFITDEVATGFGRTGKMFACEHENVTPDIMT--AGKGLTGGY-LPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYT 332 (460)
T ss_pred HcCCEEEeechhhCCCcCchhhHHHhcCCCCCeee--eehhhhcCc-cccceeeecHHHHHHhhccccccCccccCCCCC
Confidence 99999999999632 111 122223468875 689998642 2367788888888765421 00 1111 1
Q ss_pred chHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCcEEEeCCC
Q 012321 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA---HPKVKRVHYPG 437 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L~~---~p~V~~V~~Pg 437 (466)
.+|..+..++..|+.+.. .+++..+..+++.+.|++ +|.|..|..-|
T Consensus 333 gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~G 384 (460)
T PRK06916 333 GNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLG 384 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCC
Confidence 356655555555554432 344555555555555554 45555555444
No 354
>PRK06917 hypothetical protein; Provisional
Probab=98.99 E-value=1.4e-07 Score=100.52 Aligned_cols=229 Identities=14% Similarity=0.157 Sum_probs=134.7
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchHHHHHhhcc----
Q 012321 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLP---- 271 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~~~~~~~l~---- 271 (466)
.+.++...+|.++|+++... +.+.+++||++|+..++..... + ..+|+.....|++........-.
T Consensus 70 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~ 149 (447)
T PRK06917 70 QFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLR 149 (447)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccc
Confidence 35678888999999998754 4677789999999998875421 2 36788888888774322111100
Q ss_pred --cC-----CcEEEEeC--------C-------CCHHHHHHhccC---CCceEEEEeCCCCC-Cccccc----HHHHHHH
Q 012321 272 --KM-----GITATVID--------P-------ADMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD----VKLVSDL 321 (466)
Q Consensus 272 --~~-----gi~v~~vd--------~-------~D~e~Le~ai~~---~~tklV~lesPsNP-tG~v~d----l~~I~el 321 (466)
.+ ++.....+ . .+++.+++.++. +++.+|++|....- -|.+.+ +++|.++
T Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~l 229 (447)
T PRK06917 150 RQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEI 229 (447)
T ss_pred cccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHH
Confidence 00 11100000 0 123566666642 24899999976543 344442 7899999
Q ss_pred HHhcCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-H-HhCC--Cc
Q 012321 322 CHKKGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-H-VLGG--AL 391 (466)
Q Consensus 322 a~~~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-~-~~G~--~l 391 (466)
|+++|+++|+||++.. +.. ......-.|+++ ++|.+++.- ...|++++++++++.+.... . ..+. ..
T Consensus 230 c~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~--~gK~l~~G~-~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~g 306 (447)
T PRK06917 230 CDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMT--LGKGLGAGY-TPIAATVVSDRVMEPILRGSRSIMSGHTLSA 306 (447)
T ss_pred HHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEE--eeehhccCC-cceEEEEEcHHHHHHHhccCcccccccCCCC
Confidence 9999999999999642 111 122223368765 689998641 13577888888887765311 1 1121 23
Q ss_pred hHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc----CCCcEEEeCCC
Q 012321 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPG 437 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L~~----~p~V~~V~~Pg 437 (466)
+|..+..++..|+.+.. .+++..+..++|.+.|++ +|.|..|.--|
T Consensus 307 npl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G 358 (447)
T PRK06917 307 NPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKG 358 (447)
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Confidence 56666555555555432 334444455555554443 56666555443
No 355
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.99 E-value=1.4e-07 Score=100.88 Aligned_cols=229 Identities=14% Similarity=0.184 Sum_probs=135.2
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCccchH-HHHHhh-cc--
Q 012321 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTR-IFIETV-LP-- 271 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~-------p-GD~VLv~~~~y~~t~-~~~~~~-l~-- 271 (466)
.+.++...+|.++|+++.. .+.+.+++||++|+..++..... + ..+||.....|++.. ..+... ..
T Consensus 86 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 165 (466)
T PRK07030 86 GFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALF 165 (466)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccc
Confidence 3557788889999998764 36788889999999988875421 2 357888888887732 211100 00
Q ss_pred --cCC---cEEEEeCCC-----------------CHHHHHHhccC--CCceEEEEeC-CCCCCccccc----HHHHHHHH
Q 012321 272 --KMG---ITATVIDPA-----------------DMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 272 --~~g---i~v~~vd~~-----------------D~e~Le~ai~~--~~tklV~les-PsNPtG~v~d----l~~I~ela 322 (466)
.++ -.+..++.. +++.+++.+.. +++.+|++|. ...-.|.+.+ +++|.++|
T Consensus 166 ~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc 245 (466)
T PRK07030 166 TETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREAC 245 (466)
T ss_pred cccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHH
Confidence 000 011112111 24556777742 3489999987 4544565543 78999999
Q ss_pred HhcCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH-----HHHhCC--
Q 012321 323 HKKGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGG-- 389 (466)
Q Consensus 323 ~~~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~-----~~~~G~-- 389 (466)
+++|+++|+||++.. +.+ ......-.||++. .|.++|. -...|.+++++++.+.+..- ....+.
T Consensus 246 ~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~ 322 (466)
T PRK07030 246 DRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCL--SKALTGG-YLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSY 322 (466)
T ss_pred HHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEee--ehhccCC-cccceEEEecHHHHHHHhcccccccccccCCCC
Confidence 999999999999532 211 2222334688874 8999864 12367788899988776421 001122
Q ss_pred CchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH---cCCCcEEEeCCC
Q 012321 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE---AHPKVKRVHYPG 437 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L~---~~p~V~~V~~Pg 437 (466)
..+|..+..++..|+.+.. .+++..+..++|.+.|+ ++|.|..|..-|
T Consensus 323 ~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~G 375 (466)
T PRK07030 323 TGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAEVRQTG 375 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEece
Confidence 2356666655555555432 23344444444444443 356665555444
No 356
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.99 E-value=7.6e-08 Score=101.08 Aligned_cols=231 Identities=16% Similarity=0.160 Sum_probs=143.5
Q ss_pred cCCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCccchH-H-------
Q 012321 204 YGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTR-I------- 264 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g---~e~~v~~~SG~aAi~~al~all-------~pG-D~VLv~~~~y~~t~-~------- 264 (466)
++-...| ..+|.++|+++.. .+.+.+..||++|+..++...+ +|. .++|.-...|++.. .
T Consensus 82 ~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~ 160 (449)
T COG0161 82 GGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGP 160 (449)
T ss_pred cccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCc
Confidence 3444567 8999999999987 3677888899999988886442 232 34787788887621 1
Q ss_pred --HHHhhcccCCcEEEEeCC-----------------CCHHHHHHhccC---CCceEEEEeCCCCC-Cccccc----HHH
Q 012321 265 --FIETVLPKMGITATVIDP-----------------ADMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD----VKL 317 (466)
Q Consensus 265 --~~~~~l~~~gi~v~~vd~-----------------~D~e~Le~ai~~---~~tklV~lesPsNP-tG~v~d----l~~ 317 (466)
..+......-..+..++. ...++|++.|.. +++.++++|....- .|.+.+ +++
T Consensus 161 ~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~ 240 (449)
T COG0161 161 VALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKR 240 (449)
T ss_pred hhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHH
Confidence 111111111011111111 114566666654 45889999988766 566654 899
Q ss_pred HHHHHHhcCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH-HH----H
Q 012321 318 VSDLCHKKGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-HH----V 386 (466)
Q Consensus 318 I~ela~~~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~-~~----~ 386 (466)
+.++|++||++||.||+... +-+ ..-...-.||++ +.|.+.+.- +..|.++.++++.+.+..- .. .
T Consensus 241 vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~--~aKGLT~GY-~Pl~a~l~~~~I~~~~~~~~~~~f~HG 317 (449)
T COG0161 241 VREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILC--LAKGLTGGY-LPLSAVLTSDRIYEAFSDGDAGAFMHG 317 (449)
T ss_pred HHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeee--ecccccccc-hhhHhHhhhHHHHHHHhcccCCeeccC
Confidence 99999999999999998422 211 111122357776 679998765 3345566777787776643 11 1
Q ss_pred hCCCchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCcEEEeCCCC
Q 012321 387 LGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPGL 438 (466)
Q Consensus 387 ~G~~ls~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L~----~~p~V~~V~~PgL 438 (466)
...+-+|..|..++..|+-++. .+++..+...++.+.|+ ++|.|..|+--|+
T Consensus 318 ~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gl 375 (449)
T COG0161 318 HTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGL 375 (449)
T ss_pred CccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccce
Confidence 1234578888888877776652 34555566666666555 4567777765554
No 357
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.99 E-value=9.8e-08 Score=100.63 Aligned_cols=223 Identities=18% Similarity=0.210 Sum_probs=135.0
Q ss_pred hhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccc-hHHHHHhhc---c------cCC
Q 012321 210 PTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRK-TRIFIETVL---P------KMG 274 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~-t~~~~~~~l---~------~~g 274 (466)
+...++.++|.++... ..+++.+||++|+.+++.... ..+..||.....|++ |...+...- . .+.
T Consensus 99 e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~ 178 (447)
T COG0160 99 EPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLP 178 (447)
T ss_pred hhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCC
Confidence 6677888888887653 568888999999999987532 334678888877776 333332111 1 111
Q ss_pred cEEEEeCCC-----------------CHHHHHHhccC-----CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCE
Q 012321 275 ITATVIDPA-----------------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (466)
Q Consensus 275 i~v~~vd~~-----------------D~e~Le~ai~~-----~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gil 328 (466)
-.+..++.. ..+.+++.+.. .++.+|++|....-.|.+.+ ++++.++|++||++
T Consensus 179 ~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gil 258 (447)
T COG0160 179 PGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGIL 258 (447)
T ss_pred CCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 113333211 12334543422 24889999999988888875 78999999999999
Q ss_pred EEEeCCCCC----CCccchhccC--CcEEEeccccccccccCceEEEEEeChHHHHHHHH-HHHHhCCCchHHHHHHHHH
Q 012321 329 VCIDGTFAT----PLNQKALSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LHHVLGGALNPNAAYLIIR 401 (466)
Q Consensus 329 lIvD~t~a~----~~~~~pl~~g--aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~-~~~~~G~~ls~~~A~l~lr 401 (466)
+|+||++.. +-+...-.+| .||++ ++|.+++ | ...|.+++++++.+.... ....+++ +|..+..++.
T Consensus 259 lI~DEVQtG~GRTG~~fa~E~~gv~PDivt--~aK~ig~-G-~Pl~avv~r~ei~~~~~g~~~~Tf~G--Npva~Aaa~A 332 (447)
T COG0160 259 LIADEVQTGFGRTGKMFAFEHFGVEPDIVT--LAKSLGG-G-LPLSAVVGRAEIMDWPPGGHGGTFGG--NPVACAAALA 332 (447)
T ss_pred EEEeccccCCCccccchhhhhcCCCCCEEE--ecccccC-C-CceeEEeccHHhcccCCcccCCCCCc--CHHHHHHHHH
Confidence 999999753 2222222233 68876 6799998 3 467888999988772221 1222333 4555555554
Q ss_pred hhHHHHH--HHHHHHHHHHHHHHHH----HcCCCcEEEeCCCC
Q 012321 402 GMKTLHL--RVQQQNSTALRMAKIL----EAHPKVKRVHYPGL 438 (466)
Q Consensus 402 gL~tl~~--R~e~~~~na~~La~~L----~~~p~V~~V~~PgL 438 (466)
-|+.++. .+++..+.-++|.+.| +++|.|..|+--||
T Consensus 333 vL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Gl 375 (447)
T COG0160 333 VLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGL 375 (447)
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccce
Confidence 4554332 2333333333344433 34677766665554
No 358
>PRK07483 hypothetical protein; Provisional
Probab=98.98 E-value=1.3e-07 Score=100.53 Aligned_cols=229 Identities=16% Similarity=0.220 Sum_probs=134.8
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHH-HHHhh----c-
Q 012321 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRI-FIETV----L- 270 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~-------pG-D~VLv~~~~y~~t~~-~~~~~----l- 270 (466)
+.++....|.++|.++.. .+.+.+++||++|+..++..... +| .+||.....|++... .+... .
T Consensus 70 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~ 149 (443)
T PRK07483 70 FTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRR 149 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccc
Confidence 467888899999999864 36788889999999988874321 23 468888888877421 11100 0
Q ss_pred ccCC---cEEEEeCC----CC--------------HHHHHHhcc---CCCceEEEEeCCCC-CCccccc----HHHHHHH
Q 012321 271 PKMG---ITATVIDP----AD--------------MEGLEAALN---NNNVSLFFTESPTN-PFLRCVD----VKLVSDL 321 (466)
Q Consensus 271 ~~~g---i~v~~vd~----~D--------------~e~Le~ai~---~~~tklV~lesPsN-PtG~v~d----l~~I~el 321 (466)
..++ ..+..++. .+ ++++++.+. .+++.+|++|.... -.|.+.+ +++|.++
T Consensus 150 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~l 229 (443)
T PRK07483 150 EPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREV 229 (443)
T ss_pred cccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHH
Confidence 0010 01112211 01 256666553 23488999998763 2354443 8899999
Q ss_pred HHhcCCEEEEeCCCCCC----Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH--HHhCC--Cc
Q 012321 322 CHKKGAIVCIDGTFATP----LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGG--AL 391 (466)
Q Consensus 322 a~~~gillIvD~t~a~~----~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~--~~~G~--~l 391 (466)
|++||+++|+||++... .+ ..-.....||++ +.|.+++. -...|.+++++++.+.+.... ...+. .-
T Consensus 230 c~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~g 306 (443)
T PRK07483 230 CDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVT--IAKGLGAG-YQPIGAVLASDRIYDAIADGSGFFQHGHTYLG 306 (443)
T ss_pred HHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeee--ehhhhccC-ccccEEEEEcHHHHHHHhcCCCccccCCCCCC
Confidence 99999999999995421 11 122233468877 58999864 113577788888887765311 01121 23
Q ss_pred hHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHH----HcCCCcEEEeCCCC
Q 012321 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKIL----EAHPKVKRVHYPGL 438 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L----~~~p~V~~V~~PgL 438 (466)
+|..+..++..|+.+.. .+++..+..++|.+.| +++|.|..|+--||
T Consensus 307 npl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Gl 359 (443)
T PRK07483 307 HATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGL 359 (443)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeeccc
Confidence 56655555555554432 2344444444444444 44676766665553
No 359
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.97 E-value=2.7e-07 Score=101.20 Aligned_cols=220 Identities=14% Similarity=0.062 Sum_probs=140.2
Q ss_pred CccCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc---------C----------------------
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP---------A---------------------- 248 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~---------p---------------------- 248 (466)
+..+......-+++-++++++.|- ...+++++|+.|+..++..... .
T Consensus 115 ~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~ 194 (608)
T TIGR03811 115 YESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEI 194 (608)
T ss_pred cccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccc
Confidence 344433333444555667778875 3578899999887766543211 0
Q ss_pred ---------------------C------CEEEEcCCCccchHHHHHhhcccCCc---EEEEeC-----CCCHHHHHHhcc
Q 012321 249 ---------------------G------GHIVTTTDCYRKTRIFIETVLPKMGI---TATVID-----PADMEGLEAALN 293 (466)
Q Consensus 249 ---------------------G------D~VLv~~~~y~~t~~~~~~~l~~~gi---~v~~vd-----~~D~e~Le~ai~ 293 (466)
| ..++++...|.+..... ..+|+ .+..++ ..|+++|++.|+
T Consensus 195 ~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa----~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~ 270 (608)
T TIGR03811 195 MDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAA----DIIGIGLDQVIPVPVDSNYRMDINELEKIIR 270 (608)
T ss_pred cccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHH----HHcCCCcccEEEeecCCCCcCCHHHHHHHHH
Confidence 0 04777777777755433 33344 233333 348899988875
Q ss_pred C----C-CceEEEEeCCCCCCcccccHHHHHHHH---HhcCC--EEEEeCCCCCCC---ccc------h-----------
Q 012321 294 N----N-NVSLFFTESPTNPFLRCVDVKLVSDLC---HKKGA--IVCIDGTFATPL---NQK------A----------- 343 (466)
Q Consensus 294 ~----~-~tklV~lesPsNPtG~v~dl~~I~ela---~~~gi--llIvD~t~a~~~---~~~------p----------- 343 (466)
+ . ++-+|+....+..+|.+-|+++|+++| +++|+ +++||.+|+... +.+ |
T Consensus 271 ~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~ 350 (608)
T TIGR03811 271 KLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEY 350 (608)
T ss_pred HHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccc
Confidence 3 1 245666677788899999999999998 67887 699999998642 111 0
Q ss_pred -----------------h--ccCCcEEEeccccccccccCceEEEE-EeChHHHHHHHHHHH-----------------H
Q 012321 344 -----------------L--SLGADLVLHSATKFIGGHNDVLAGSI-SGSGKLVTQIRNLHH-----------------V 386 (466)
Q Consensus 344 -----------------l--~~gaDivv~S~sK~lgG~gdv~gG~v-vg~~eli~~l~~~~~-----------------~ 386 (466)
+ -..+|-+...+||++.-+-. .|++ +.++++.+.+..... .
T Consensus 351 ~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~--~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~l 428 (608)
T TIGR03811 351 GVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYS--AGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYIL 428 (608)
T ss_pred cccccccccccHhHHHHHhcCcCceEEEeCcccccccCCC--eEEEEEeCHHHHHHHhcCcchhccccccCcccccccce
Confidence 0 02589999999999887753 4544 445554443321110 0
Q ss_pred hCCCch--HHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 387 LGGALN--PNAAYLIIRG----MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 387 ~G~~ls--~~~A~l~lrg----L~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.|.... ....|+.++. .+.+...+++..++++++++.|+++
T Consensus 429 egSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 429 EGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred ecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 122222 4667777654 4578889999999999999999883
No 360
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.94 E-value=3e-07 Score=98.18 Aligned_cols=225 Identities=13% Similarity=0.092 Sum_probs=128.9
Q ss_pred CCchhHHHHHHHHHhhhCCC----cEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc---------
Q 012321 207 YGNPTTVVVEEKMSALEGAE----STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL--------- 270 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e----~~v~~-~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l--------- 270 (466)
+.++...+|.++|.++.... ..+++ +||++|+..++.... ...++||.....|++.......+-
T Consensus 98 ~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~ 177 (459)
T PRK06931 98 LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAV 177 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCC
Confidence 46788889999999887532 24455 799999999887532 334678888888887432221110
Q ss_pred ccCCcEEEEeCCC-------------CHHH----HHHhcc-----CCCceEEEEeCCCCCCccccc----HHHHHHHHHh
Q 012321 271 PKMGITATVIDPA-------------DMEG----LEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (466)
Q Consensus 271 ~~~gi~v~~vd~~-------------D~e~----Le~ai~-----~~~tklV~lesPsNPtG~v~d----l~~I~ela~~ 324 (466)
....-.+..++.. +.+. +++.+. ..++.+|++|....-.|.+.+ +++|.++|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~ 257 (459)
T PRK06931 178 NGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQK 257 (459)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 0000112222211 1222 233332 124889999987765666553 7899999999
Q ss_pred cCCEEEEeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCC--CchHHHH
Q 012321 325 KGAIVCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAA 396 (466)
Q Consensus 325 ~gillIvD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~--~ls~~~A 396 (466)
+|+++|.||++.. +.+ ......-.||++ +.|.+++. ...|++++++++ +.+... ..+. .-+|..+
T Consensus 258 ~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt--~gK~l~gG--~Pi~av~~~~~~-~~~~~~--~~~~T~~gnpla~ 330 (459)
T PRK06931 258 HGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV--MSKAVGGG--LPLAVLGIKKEF-DAWQPG--GHTGTFRGNQLAM 330 (459)
T ss_pred cCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE--ecccccCC--cceeeeeeHHHH-hhccCC--CCCCCCCCCHHHH
Confidence 9999999999542 211 222233468877 58999875 345667776653 443211 1122 2356666
Q ss_pred HHHHHhhHHHHH--HHHHHHHHHHHHHHHH----HcCCCcEEEeCCCC
Q 012321 397 YLIIRGMKTLHL--RVQQQNSTALRMAKIL----EAHPKVKRVHYPGL 438 (466)
Q Consensus 397 ~l~lrgL~tl~~--R~e~~~~na~~La~~L----~~~p~V~~V~~PgL 438 (466)
..++..|+.+.. .+++..+..++|.+.| +++|.|..|+..|+
T Consensus 331 aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl 378 (459)
T PRK06931 331 ATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGL 378 (459)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCce
Confidence 665555554432 2233333334444433 34676666665544
No 361
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.93 E-value=1.8e-07 Score=105.83 Aligned_cols=230 Identities=14% Similarity=0.138 Sum_probs=135.4
Q ss_pred CCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhcc---------------------CCCEEEEcCCCccc
Q 012321 206 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP---------------------AGGHIVTTTDCYRK 261 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g---~e~~v~~~SG~aAi~~al~all~---------------------pGD~VLv~~~~y~~ 261 (466)
.+.++...+|.++|.+..+ .+.+.+..||++|+..++....+ ...+||.....|++
T Consensus 405 ~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG 484 (817)
T PLN02974 405 ENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHG 484 (817)
T ss_pred ccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCC
Confidence 3467778888888888665 24677788999998887764321 12468888888877
Q ss_pred -hHHHHHhhc---------cc----CCcEE----EE---------eCCC-------------------C-----------
Q 012321 262 -TRIFIETVL---------PK----MGITA----TV---------IDPA-------------------D----------- 284 (466)
Q Consensus 262 -t~~~~~~~l---------~~----~gi~v----~~---------vd~~-------------------D----------- 284 (466)
+...+...- .. .+..+ .. ++.. |
T Consensus 485 ~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~ 564 (817)
T PLN02974 485 DTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKA 564 (817)
T ss_pred CCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHH
Confidence 222221100 00 00000 00 0000 0
Q ss_pred -HHHHHHhcc-------CCCceEEEEeCC-CCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC----Cc--cchhc
Q 012321 285 -MEGLEAALN-------NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----LN--QKALS 345 (466)
Q Consensus 285 -~e~Le~ai~-------~~~tklV~lesP-sNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~----~~--~~pl~ 345 (466)
.+.+++.|+ .+++.+|++|.. ..-.|.+.+ +++|.++|+++|++||.||++... .+ ...+.
T Consensus 565 ~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~g 644 (817)
T PLN02974 565 YRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLG 644 (817)
T ss_pred HHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcC
Confidence 144666553 235899999885 455566653 789999999999999999996532 11 22222
Q ss_pred cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH------HHHhCCCchHHHHHHHHHhhHHHHHH--HHHHHHHH
Q 012321 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL------HHVLGGALNPNAAYLIIRGMKTLHLR--VQQQNSTA 417 (466)
Q Consensus 346 ~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~------~~~~G~~ls~~~A~l~lrgL~tl~~R--~e~~~~na 417 (466)
.-.||++ +.|.++|.- +..|.+++++++.+.+..- ......+.+|..+..++..|+.+... +++..++.
T Consensus 645 v~PDIi~--~gKgLtgG~-~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~ 721 (817)
T PLN02974 645 CKPDIAC--YAKLLTGGL-VPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPG 721 (817)
T ss_pred CCCCEEe--ecccccCCC-CccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 3368887 679998752 2467788888888877421 11111234677777766666655431 11222222
Q ss_pred --------HHHHHHHHcCCCcEEEeCCCC
Q 012321 418 --------LRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 418 --------~~La~~L~~~p~V~~V~~PgL 438 (466)
..+.+.|+++|.|..|+.-|+
T Consensus 722 ~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl 750 (817)
T PLN02974 722 SRLRELWDEELVRAISSLPNVERVVSLGT 750 (817)
T ss_pred HHHHHHHHHHHHHHHhhCCCeeEEEeeee
Confidence 233345567888888776554
No 362
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.91 E-value=6.7e-09 Score=105.44 Aligned_cols=209 Identities=16% Similarity=0.158 Sum_probs=148.8
Q ss_pred hHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHH
Q 012321 211 TTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEA 290 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ 290 (466)
..-.||+.||++.|.++.++++-|-+++..++.++.+.||.|++......... ..++...-++.++..+|.++++.
T Consensus 140 vHldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq----~GlqlSRS~i~~Fkhndm~~ler 215 (467)
T KOG1358|consen 140 VHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQ----KGLQLSRSTISYFKHNDMEDLER 215 (467)
T ss_pred eecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHH----HHHhhhhheeEEecCCCHHHHHH
Confidence 35578999999999999999999999999999999999999999877665533 33333344667788888888887
Q ss_pred hccCCC------------ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccch---h-------ccCC
Q 012321 291 ALNNNN------------VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---L-------SLGA 348 (466)
Q Consensus 291 ai~~~~------------tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~p---l-------~~ga 348 (466)
.+.+.. -+.|++|-..-++|.+.++.+|.++..++...+++|+++..+...+- + ....
T Consensus 216 ll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~i 295 (467)
T KOG1358|consen 216 LLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDI 295 (467)
T ss_pred hccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccce
Confidence 764421 35788899888999999999999999999999999999876654321 0 1236
Q ss_pred cEEEeccccccccccCceEEEEEeChHHH--HHHHHHHHHhCCCchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLV--TQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli--~~l~~~~~~~G~~ls~~~A~l~lrg---L~tl~~R~e~~~~na~~La~~ 423 (466)
|+++.|+.-.++.. ||+.+|+.-++ ++|......+...+.|..+-.+... +++-+.+++..+.....+-..
T Consensus 296 Div~~sm~~alas~----GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~ 371 (467)
T KOG1358|consen 296 DIVTASMETALASG----GGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAA 371 (467)
T ss_pred eeeeeccccccccc----CceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchh
Confidence 89999999998875 47888855332 4444444445555666544433333 333334444454444455555
Q ss_pred HHcC
Q 012321 424 LEAH 427 (466)
Q Consensus 424 L~~~ 427 (466)
|+..
T Consensus 372 l~~~ 375 (467)
T KOG1358|consen 372 LSSN 375 (467)
T ss_pred hhcC
Confidence 5554
No 363
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.89 E-value=9.9e-08 Score=101.09 Aligned_cols=218 Identities=17% Similarity=0.197 Sum_probs=124.3
Q ss_pred hHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhc-cCC-CEEEEc-CCCccchHHHHHh-hcccCCc------EEEE
Q 012321 211 TTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV-PAG-GHIVTT-TDCYRKTRIFIET-VLPKMGI------TATV 279 (466)
Q Consensus 211 ~~~~Lee~lA~l~g-~e~~v~~~SG~aAi~~al~all-~pG-D~VLv~-~~~y~~t~~~~~~-~l~~~gi------~v~~ 279 (466)
...+|.++|.++.. .+.+.+++||++|+..++.... -.| .+|+.. ...|.+....+.. .....++ .+..
T Consensus 89 ~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~ 168 (431)
T PRK06209 89 IELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVT 168 (431)
T ss_pred HHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccc
Confidence 33467888888774 4678889999999998887432 234 355554 2333321111100 0000111 1223
Q ss_pred eCCCCHHHHHHhccC--CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc------chhccCCcEE
Q 012321 280 IDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALSLGADLV 351 (466)
Q Consensus 280 vd~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~------~pl~~gaDiv 351 (466)
++..|++++++.++. +++.+|++|......+..-.+++|.++|++||+++|+||++ +++.. .......|+
T Consensus 169 ~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi- 246 (431)
T PRK06209 169 FRYNDIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDL- 246 (431)
T ss_pred cCCCCHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcce-
Confidence 445688999988852 24789999876533222334899999999999999999986 33211 112223566
Q ss_pred EeccccccccccCceEEEEEeChHHHHH--HHHH--HH--HhCCC--chHHHHHHHHHhhHHHHH--HHHHHHHHHHHHH
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQ--IRNL--HH--VLGGA--LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMA 421 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~--l~~~--~~--~~G~~--ls~~~A~l~lrgL~tl~~--R~e~~~~na~~La 421 (466)
.+++|.+++. ..+|++++++++++. +... .. ..+.+ .+|..+..++..|+.+.. .+++..++.+++.
T Consensus 247 -~t~gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~ 323 (431)
T PRK06209 247 -SCFGKALGNG--FAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLA 323 (431)
T ss_pred -eeehhhhcCC--cccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 4579999874 347888898888775 3111 01 12323 234555555555554421 3445555555555
Q ss_pred HHHHc----CCCcEEE
Q 012321 422 KILEA----HPKVKRV 433 (466)
Q Consensus 422 ~~L~~----~p~V~~V 433 (466)
+.|++ ++.+..|
T Consensus 324 ~~L~~~~~~~~~~~~v 339 (431)
T PRK06209 324 AGVNEAAAEHGLQDHV 339 (431)
T ss_pred HHHHHHHHhCCCCeEE
Confidence 55543 5554333
No 364
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.88 E-value=8.9e-08 Score=108.30 Aligned_cols=212 Identities=18% Similarity=0.207 Sum_probs=143.7
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc---cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHH
Q 012321 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all---~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e 286 (466)
.-.++..+++|.|.+ ++=++-.++++-.+++++.- .+..+|++++.+|+.+...++..++..|+++.. +
T Consensus 126 l~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~ 199 (954)
T PRK12566 126 LLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------D 199 (954)
T ss_pred HHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------c
Confidence 345588899999986 55666666654444444332 225689999999999999888888889999875 3
Q ss_pred HHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC--CCCCCccchhccCCcEEEecccc-----cc
Q 012321 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT--FATPLNQKALSLGADLVLHSATK-----FI 359 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t--~a~~~~~~pl~~gaDivv~S~sK-----~l 359 (466)
++++.++++ +..|++.+|+ -.|.+.|+++|.+++|++|++++ +.+ .+-.++..|-++|+||++.+..- .|
T Consensus 200 ~~~~~~~~~-~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~ 276 (954)
T PRK12566 200 AVDNLAAHA-VFGALLQYPD-THGEIRDLRPLIDQLHGQQALAC-VAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGY 276 (954)
T ss_pred chhhcCCCC-EEEEEEECCC-CceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCC
Confidence 445556554 8999999998 68999999999999999999866 433 23346678899999999986543 45
Q ss_pred ccccCceEEEEEeChHHHHHHH----------------------------HHHHHhCCCchH------HHHHHHHHhhHH
Q 012321 360 GGHNDVLAGSISGSGKLVTQIR----------------------------NLHHVLGGALNP------NAAYLIIRGMKT 405 (466)
Q Consensus 360 gG~gdv~gG~vvg~~eli~~l~----------------------------~~~~~~G~~ls~------~~A~l~lrgL~t 405 (466)
|||. +|++.+++++..++- +-+..-..+.++ ...|+++.|-+-
T Consensus 277 GGP~---ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~G 353 (954)
T PRK12566 277 GGPH---AAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEG 353 (954)
T ss_pred CCCC---eeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHH
Confidence 6664 788888776654431 111111111111 123444545555
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcEEEeCC
Q 012321 406 LHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 406 l~~R~e~~~~na~~La~~L~~~p~V~~V~~P 436 (466)
|...-++...++.++++.|.+ .+++.++-|
T Consensus 354 l~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~ 383 (954)
T PRK12566 354 LKRIAQRVHRLTAILAAGLEA-KGIKRLNRH 383 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCccccCC
Confidence 555556677788899999988 555544444
No 365
>PRK06148 hypothetical protein; Provisional
Probab=98.84 E-value=5.9e-07 Score=104.46 Aligned_cols=227 Identities=16% Similarity=0.147 Sum_probs=136.9
Q ss_pred CCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHH-HHHh----hcccCC-
Q 012321 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRI-FIET----VLPKMG- 274 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~-~~~~----~l~~~g- 274 (466)
.++.+|...+|.++|+++... +.+.+++||++|+..++.... ....+||+....|++... .+.. .-...+
T Consensus 658 ~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~ 737 (1013)
T PRK06148 658 TRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGK 737 (1013)
T ss_pred CCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCC
Confidence 366788899999999998753 567888999999999887542 234578888888877321 1110 000011
Q ss_pred ---cEEEEe--------CC--CC-------HHHHHHhcc-----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhc
Q 012321 275 ---ITATVI--------DP--AD-------MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (466)
Q Consensus 275 ---i~v~~v--------d~--~D-------~e~Le~ai~-----~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~ 325 (466)
-.+..+ +. .+ .+.+++.+. .+++.+|++|....-.|.+.+ +++|.++|+++
T Consensus 738 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~ 817 (1013)
T PRK06148 738 GRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA 817 (1013)
T ss_pred CCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh
Confidence 011111 11 11 134554442 134899999988766676665 89999999999
Q ss_pred CCEEEEeCCCCC----CC-c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH---HHHhCCCchHHH
Q 012321 326 GAIVCIDGTFAT----PL-N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---HHVLGGALNPNA 395 (466)
Q Consensus 326 gillIvD~t~a~----~~-~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~---~~~~G~~ls~~~ 395 (466)
|+++|.||++.. +. + +.-...-.||++ +.|.+++. ...|.+++++++++.+..- ...++ -+|..
T Consensus 818 g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt--~gK~lggG--~Plgav~~~~ei~~~~~~g~~~~~Tf~--gnpla 891 (1013)
T PRK06148 818 GGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVT--MGKPIGNG--HPMGAVVTTREIADSFDNGMEYFNTFG--GNPVS 891 (1013)
T ss_pred CCEEEEEecccCCCCCCCcchhhhhcCCCcceee--ecccccCC--cceEEEEEcHHHHhhccCCCccccCCC--CCHHH
Confidence 999999999642 21 1 222223368866 58999875 3467888889888776421 11222 35666
Q ss_pred HHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCcEEEeCCC
Q 012321 396 AYLIIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPG 437 (466)
Q Consensus 396 A~l~lrgL~tl~~--R~e~~~~na~~La~~L~----~~p~V~~V~~Pg 437 (466)
+..++..|+.+.. .+++..+...+|.+.|+ ++|.|..|+.-|
T Consensus 892 ~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~G 939 (1013)
T PRK06148 892 CAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMG 939 (1013)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeec
Confidence 6655555555432 23334444444444443 356666665444
No 366
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.84 E-value=8.6e-08 Score=98.77 Aligned_cols=212 Identities=16% Similarity=0.197 Sum_probs=138.9
Q ss_pred hhHHHHHHHHHhhhCCCcEEEe-CCHHHHHH---HHHHHh-ccCC----CEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 210 PTTVVVEEKMSALEGAESTVIM-ASGMSAST---VMLLAL-VPAG----GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~v~~-~SG~aAi~---~al~al-l~pG----D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
....+|+++|.++.|.+.+-+. .+|++.=. +++++. -..| +.+|+++..|+.... .+...|.+|..+
T Consensus 109 ~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA----SAam~G~~VV~V 184 (496)
T COG1003 109 ELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA----SAAMAGFKVVVV 184 (496)
T ss_pred HHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh----hHhhcCceEEEE
Confidence 4567889999999998877666 45554333 333333 2333 579999999998653 234468888777
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCccc-ccHHHHHHHHHhcCCEEEEeCCCCCCC--ccchhccCCcEEE
Q 012321 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVL 352 (466)
Q Consensus 281 d~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v-~dl~~I~ela~~~gillIvD~t~a~~~--~~~pl~~gaDivv 352 (466)
+. .|+++|++++.++ +.++++.+||. .|.. .+|.+|+++.|++|..|..|.+-.... ..+|-++|+|++=
T Consensus 185 ~~~~~G~VDlddLk~k~~~~-~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~H 262 (496)
T COG1003 185 KCDENGNVDLDDLRAKAEDN-LAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVH 262 (496)
T ss_pred ecCCCCCccHHHHHHHhccc-eeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEE
Confidence 64 3899999999875 99999988883 3433 479999999999999999999854332 3678899999999
Q ss_pred ecccccccccc---CceEEEEEeChHHHHHHHH----------------------HHHHhCCCchHHHHHH--HHHhhHH
Q 012321 353 HSATKFIGGHN---DVLAGSISGSGKLVTQIRN----------------------LHHVLGGALNPNAAYL--IIRGMKT 405 (466)
Q Consensus 353 ~S~sK~lgG~g---dv~gG~vvg~~eli~~l~~----------------------~~~~~G~~ls~~~A~l--~lrgL~t 405 (466)
..+||+|+.+. +-.+|-|..+.++...|-. ....+|...--..+|. ...|-+-
T Consensus 263 lNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~G 342 (496)
T COG1003 263 LNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADG 342 (496)
T ss_pred eecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHH
Confidence 99999996332 1123445444444322211 0001111111122343 3334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC
Q 012321 406 LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 406 l~~R~e~~~~na~~La~~L~~~ 427 (466)
|..--+...-|+.++++.|+.+
T Consensus 343 L~~ase~AvLNANYia~rL~~~ 364 (496)
T COG1003 343 LKQASEVAVLNANYIARRLKGY 364 (496)
T ss_pred HHHHHHHHHHhHHHHHHHhhhc
Confidence 4444455567899999999864
No 367
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.84 E-value=3.3e-07 Score=97.16 Aligned_cols=162 Identities=13% Similarity=0.157 Sum_probs=99.8
Q ss_pred CCCchhHHHHHHHHHhhh---CCCcEEEeCCHHHHHHHHHHHhcc--------C------CCEEEEcCCCccchHHHHHh
Q 012321 206 RYGNPTTVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVP--------A------GGHIVTTTDCYRKTRIFIET 268 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~---g~e~~v~~~SG~aAi~~al~all~--------p------GD~VLv~~~~y~~t~~~~~~ 268 (466)
.+.++...++.++|+++. +.+.+.+.+||++|+..++..... . +.+||.....|++.......
T Consensus 81 ~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als 160 (431)
T TIGR03251 81 DVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLS 160 (431)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhh
Confidence 344666777777788774 236788889999999988875421 1 36799988888774322111
Q ss_pred hcc------cCC-------cEEEEe---------C------CCCHHHHHHhcc--CCCceEEEEeCCCCCCcccc----c
Q 012321 269 VLP------KMG-------ITATVI---------D------PADMEGLEAALN--NNNVSLFFTESPTNPFLRCV----D 314 (466)
Q Consensus 269 ~l~------~~g-------i~v~~v---------d------~~D~e~Le~ai~--~~~tklV~lesPsNPtG~v~----d 314 (466)
.-. .+. +...+. + ..+++++++.+. ..++.+|++|......|.+. -
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~ 240 (431)
T TIGR03251 161 LTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEF 240 (431)
T ss_pred ccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHH
Confidence 100 000 000000 0 012344555553 23589999998877777665 3
Q ss_pred HHHHHHHHHhcCCEEEEeCCCCCC-Cc-----cchhccCCcEEEeccccccccccCceEEEEEeCh
Q 012321 315 VKLVSDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG 374 (466)
Q Consensus 315 l~~I~ela~~~gillIvD~t~a~~-~~-----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~ 374 (466)
+++|.++|++||+++|+||++... .. ........|+++ ++|.+. ++|++.+++
T Consensus 241 l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~--~gK~~~-----~~g~~~~~~ 299 (431)
T TIGR03251 241 LRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA--FGKKTQ-----VCGIMAGRR 299 (431)
T ss_pred HHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE--ecccCc-----cceEEecch
Confidence 899999999999999999997521 11 112233468886 678762 356776653
No 368
>PLN02452 phosphoserine transaminase
Probab=98.83 E-value=1.3e-07 Score=98.00 Aligned_cols=205 Identities=11% Similarity=0.027 Sum_probs=131.2
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe---C-
Q 012321 210 PTTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI---D- 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~~-~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v---d- 281 (466)
...+..++.|.++++.+ +++++ ++|+.++.+++..++.+||++++....+.+.+ +. ..++++|...... +
T Consensus 52 ~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r-~~-~~a~~~g~~~~~~~~~~~ 129 (365)
T PLN02452 52 SIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKK-AA-KEAKKYCKTNVIASGKDE 129 (365)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHH-HH-HHHHHhCCCcEEEecCCC
Confidence 45677788899999863 35554 77789999999999999999888766655533 22 4455566433322 1
Q ss_pred ----CCCHHHHHHhccCCCceEEEEeCCCCCCccc-ccHHHHHHHHHhcCCEEEEeCCCCCCC-ccchhccCCcEEEecc
Q 012321 282 ----PADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSA 355 (466)
Q Consensus 282 ----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v-~dl~~I~ela~~~gillIvD~t~a~~~-~~~pl~~gaDivv~S~ 355 (466)
..++++++ ..+ +.+.|++++-...+|.. .|++++. ++++++|.+...+. ..+..++|+ ++.|.
T Consensus 130 ~~~~~~~~~~~~--~~~-~~~~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v--~~~sa 198 (365)
T PLN02452 130 KYTKIPSVSEWE--LTP-DAKFVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGV--IYAGA 198 (365)
T ss_pred CCCCCCChHHcC--CCC-CCcEEEECCCCCCCcEecCcccccC------CCeEEEECCccccCcccCHHHcCE--EEEec
Confidence 22455542 223 36788876555667984 7877765 28999999965442 234445555 44699
Q ss_pred ccccccccCceEEEEEeChHHHHHHHHH-------HHHh--C---CCchHHHHHHHHHhhHH------HHHHHHHHHHHH
Q 012321 356 TKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVL--G---GALNPNAAYLIIRGMKT------LHLRVQQQNSTA 417 (466)
Q Consensus 356 sK~lgG~gdv~gG~vvg~~eli~~l~~~-------~~~~--G---~~ls~~~A~l~lrgL~t------l~~R~e~~~~na 417 (466)
+|.+|.+| .|+++.++++++++... .... + .+.+....+.+...+++ ++.+.+++++.+
T Consensus 199 qK~lGP~G---l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 199 QKNVGPSG---VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKA 275 (365)
T ss_pred ccccCCCC---eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 99998665 57888888887665321 1000 1 22333333333333433 456677888999
Q ss_pred HHHHHHHHcCCCc
Q 012321 418 LRMAKILEAHPKV 430 (466)
Q Consensus 418 ~~La~~L~~~p~V 430 (466)
+.+.++|++.+++
T Consensus 276 ~~l~~~l~~~~G~ 288 (365)
T PLN02452 276 DLLYDAIDESNGF 288 (365)
T ss_pred HHHHHHHHhCCCc
Confidence 9999999987654
No 369
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.78 E-value=3.2e-07 Score=93.36 Aligned_cols=222 Identities=15% Similarity=0.196 Sum_probs=133.6
Q ss_pred CccCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHH-HHHHHHHHHhc-cCCCEEEEcCCCccchHHHHHhhcccCC-c
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMG-I 275 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~-aAi~~al~all-~pGD~VLv~~~~y~~t~~~~~~~l~~~g-i 275 (466)
|.-++.-.-.++.+.+.|.+..|. .+-|++|+|. .|+..++..++ .+.+-|+++-|-|+-.-..+ ..+| .
T Consensus 109 YS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti----~l~~~~ 184 (475)
T KOG0258|consen 109 YSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATI----SLLGGT 184 (475)
T ss_pred cccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHH----HHhCCc
Confidence 333333333444455555555552 3566677776 88888877665 56788999999987643322 2222 2
Q ss_pred EEEE-eC-----CCCHHHHHHhccC----CCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCccc
Q 012321 276 TATV-ID-----PADMEGLEAALNN----NNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQK 342 (466)
Q Consensus 276 ~v~~-vd-----~~D~e~Le~ai~~----~~tklV~lesPsNPtG~v~---dl~~I~ela~~~gillIvD~t~a~~~~~~ 342 (466)
.+.+ +| ..|.++|++.+++ -+++++++-||.||||.+. .+++|..+|+++|+.|+.||+|-..+...
T Consensus 185 ~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~ 264 (475)
T KOG0258|consen 185 QVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTT 264 (475)
T ss_pred ccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCC
Confidence 2222 22 3477888776643 2477777779999999997 58999999999999999999864432211
Q ss_pred ---------h-hccC---C----cEEEeccccccccccCceEEEEEe---ChHHHHHHHHHHHH------hCC-----Cc
Q 012321 343 ---------A-LSLG---A----DLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHV------LGG-----AL 391 (466)
Q Consensus 343 ---------p-l~~g---a----Divv~S~sK~lgG~gdv~gG~vvg---~~eli~~l~~~~~~------~G~-----~l 391 (466)
. .++| . -+.++|.||.+.|--..+||+.=. .++..+.+.++... .|. ..
T Consensus 265 ~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~V 344 (475)
T KOG0258|consen 265 GSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVV 344 (475)
T ss_pred CcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceec
Confidence 0 1122 2 267789999988776677888632 34444444333221 110 00
Q ss_pred h-------HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEE
Q 012321 392 N-------PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 392 s-------~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~ 432 (466)
+ .++.+. +.-+..++...+.++.+.+.++..++|..
T Consensus 345 nPP~Pgd~Sy~~~~-----~Ekd~il~~l~~ra~l~~~~~ns~~gi~c 387 (475)
T KOG0258|consen 345 NPPKPGDPSYDLFS-----SEKDGILSSLRSRAKLTEDAFNSLEGISC 387 (475)
T ss_pred CCCCCCCcchhhhh-----hhhHhHHHHHHHHhHHHHHHHhhcCceee
Confidence 0 122222 12233455666778888889988887653
No 370
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.74 E-value=6.1e-07 Score=89.71 Aligned_cols=213 Identities=20% Similarity=0.225 Sum_probs=136.9
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc------c--CCC--EEEEcCCCccc-hHHHH---------Hh
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV------P--AGG--HIVTTTDCYRK-TRIFI---------ET 268 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all------~--pGD--~VLv~~~~y~~-t~~~~---------~~ 268 (466)
|....++++.+.+++|.+..+-+.+|.+|...++.... + |.| .|+.....|.+ +...+ ..
T Consensus 100 nd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~ 179 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDG 179 (427)
T ss_pred hhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhc
Confidence 45667889999999999999999999999998876432 1 323 34444455544 21111 11
Q ss_pred hcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCC----C--
Q 012321 269 VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----P-- 338 (466)
Q Consensus 269 ~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~----~-- 338 (466)
.-+-..-.++.++-.|.++|+.+++..+++.+++|...-.-|.+.+ ++++.++|++|++++|.||.+.. +
T Consensus 180 fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~ 259 (427)
T KOG1402|consen 180 FGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKL 259 (427)
T ss_pred cCCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcE
Confidence 1111112255667779999999998877999999999988898875 89999999999999999999643 1
Q ss_pred CccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHHHHHHHHHHHH
Q 012321 339 LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTLHLRVQQQNST 416 (466)
Q Consensus 339 ~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~n 416 (466)
+.......-.|+|+ +.|.|+|.-- ....++++++++-.++...+ .+|+ +|+.+..+...|+-+. -++..++
T Consensus 260 la~d~env~PDivi--lgKalSGG~~-Pvsavl~~~~im~~~~pgeHgsTygg--NpLg~~vaiAalevi~--eekL~er 332 (427)
T KOG1402|consen 260 LACDYENVRPDIVI--LGKALSGGVY-PVSAVLADDDIMLNIKPGEHGSTYGG--NPLGCAVAIAALEVIV--EEKLVER 332 (427)
T ss_pred EEeehhhcCCCeEE--EeccccCCee-eeEEEEecHHHHhccCCCccccccCC--ChHHHHHHHHHHHHHH--HHHHHHH
Confidence 11222333568888 6799987642 23445677777655543222 2333 4565555544444432 2344555
Q ss_pred HHHHH----HHHHcCC
Q 012321 417 ALRMA----KILEAHP 428 (466)
Q Consensus 417 a~~La----~~L~~~p 428 (466)
+..|- ..|++.+
T Consensus 333 a~~lG~~l~~~L~~l~ 348 (427)
T KOG1402|consen 333 AAKLGEILRDQLNKLQ 348 (427)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 55544 4455543
No 371
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.74 E-value=6.7e-07 Score=91.20 Aligned_cols=229 Identities=18% Similarity=0.203 Sum_probs=134.7
Q ss_pred cCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHh-ccCC-CEEEEcCCCccchHHHH-Hhh-cccC----
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL-VPAG-GHIVTTTDCYRKTRIFI-ETV-LPKM---- 273 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~al-l~pG-D~VLv~~~~y~~t~~~~-~~~-l~~~---- 273 (466)
..-|.+|....|.++|..++-. ..+.+++||++|+.++++.. +-.| -+||.-...|.+..... ... +..+
T Consensus 86 t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~ 165 (442)
T KOG1404|consen 86 TSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNF 165 (442)
T ss_pred eccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccC
Confidence 4445577777887777776643 56778899999999887643 2223 36777788887633221 100 1111
Q ss_pred -Cc--EEEEeCCC---------C---------HHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHHHHhc
Q 012321 274 -GI--TATVIDPA---------D---------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (466)
Q Consensus 274 -gi--~v~~vd~~---------D---------~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~ 325 (466)
+. .+...... + .+++++.+. +..+...+.|+...-.|.+.. +++..++|+++
T Consensus 166 ~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~ 245 (442)
T KOG1404|consen 166 PGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR 245 (442)
T ss_pred CCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHc
Confidence 01 01111100 1 244454442 234788899999877777764 79999999999
Q ss_pred CCEEEEeCCCCC----CCccchhccC--CcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-HHhCCCchHHHHHH
Q 012321 326 GAIVCIDGTFAT----PLNQKALSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGALNPNAAYL 398 (466)
Q Consensus 326 gillIvD~t~a~----~~~~~pl~~g--aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-~~~G~~ls~~~A~l 398 (466)
|.++|.||++.. +.+.--..+| .||+ ++.|.+|.. ...|.++..+|+.+-+.+.. ....-.-+|+.+..
T Consensus 246 Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIv--TmAKgiGnG--~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~av 321 (442)
T KOG1404|consen 246 GGLFIADEVQTGFGRTGHMWGFESHGVVPDIV--TMAKGIGNG--FPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAV 321 (442)
T ss_pred CCEEEehhhhhccccccccccccccCCCccHH--HHHhhccCC--CcceeeecCHHHHHHHHhccccccccCCCchhHHH
Confidence 999999999643 2111111223 3554 689999876 34677788888887776544 21112235666665
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHH--------HcCCCcEEEeCCCC
Q 012321 399 IIRGMKTLHLRVQQQNSTALRMAKIL--------EAHPKVKRVHYPGL 438 (466)
Q Consensus 399 ~lrgL~tl~~R~e~~~~na~~La~~L--------~~~p~V~~V~~PgL 438 (466)
.+.-|+-++ -++.++|+..+...| .+||.|..|+--||
T Consensus 322 g~aVL~Vik--ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GL 367 (442)
T KOG1404|consen 322 GLAVLKVIK--EENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGL 367 (442)
T ss_pred HHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhhcCCceeeccccee
Confidence 555555443 234455554444333 34677777765554
No 372
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.71 E-value=1.5e-06 Score=89.29 Aligned_cols=224 Identities=19% Similarity=0.207 Sum_probs=142.9
Q ss_pred CccCCCCchhHHHHHHHHHhhh---CCCcEEEeCCHHHHHHHHHHHhccCC--C------EEEEcCCCccc-hHHHHHhh
Q 012321 202 FEYGRYGNPTTVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVPAG--G------HIVTTTDCYRK-TRIFIETV 269 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~---g~e~~v~~~SG~aAi~~al~all~pG--D------~VLv~~~~y~~-t~~~~~~~ 269 (466)
|..+-+.+-..-.+++.|.+.. ..+.+.+..||++|+..+|....+.. + .+|....+|++ +...+...
T Consensus 90 hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~ 169 (433)
T KOG1401|consen 90 HSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVT 169 (433)
T ss_pred eccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhh
Confidence 4444333333667788888877 45788999999999998887543211 2 38888888876 44444321
Q ss_pred -cccCCc-------EEEEeCCCCHHHHHHhccCCC--ceEEEEeCCCCCCcccc-c---HHHHHHHHHhcCCEEEEeCCC
Q 012321 270 -LPKMGI-------TATVIDPADMEGLEAALNNNN--VSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 270 -l~~~gi-------~v~~vd~~D~e~Le~ai~~~~--tklV~lesPsNPtG~v~-d---l~~I~ela~~~gillIvD~t~ 335 (466)
-..++. ++......|..++++.++.++ +.+|++|...---|.+. | +..|.++|+++|+++|.||++
T Consensus 170 ~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~ 249 (433)
T KOG1401|consen 170 GNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQ 249 (433)
T ss_pred cccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhh
Confidence 222333 233334568899999887653 78999998886566554 3 678899999999999999997
Q ss_pred CCC------CccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH-HhCCC--chHHHHHHHHHhhHHH
Q 012321 336 ATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGA--LNPNAAYLIIRGMKTL 406 (466)
Q Consensus 336 a~~------~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~-~~G~~--ls~~~A~l~lrgL~tl 406 (466)
... +.+..+..-.||.+ +.|.++|. +..|+.++++++.+.+..--. ..|.+ -+|+.+-.+...|+++
T Consensus 250 tG~gR~g~~~a~e~~~~~PDI~t--~aK~L~gG--lPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l 325 (433)
T KOG1401|consen 250 TGLGRLGYGWAQEYFGVTPDITT--VAKPLGGG--LPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDEL 325 (433)
T ss_pred hCccccchHHHHHHhCcCCccee--ehhhccCC--ceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHH
Confidence 531 12333334457665 78999986 567899999998888763222 22322 3566666666666554
Q ss_pred H--HHHHH----HHHHHHHHHHHHHcCCC
Q 012321 407 H--LRVQQ----QNSTALRMAKILEAHPK 429 (466)
Q Consensus 407 ~--~R~e~----~~~na~~La~~L~~~p~ 429 (466)
. ..+++ ....++.+.+++.+.|.
T Consensus 326 ~~~e~~k~vs~~~k~L~~~l~e~~~~~~~ 354 (433)
T KOG1401|consen 326 KDPETLKNVSKIGKELRKLLDEYLKKTPN 354 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 2 22333 34445556666666553
No 373
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.70 E-value=1.6e-06 Score=92.30 Aligned_cols=223 Identities=13% Similarity=0.125 Sum_probs=125.2
Q ss_pred CCchhHHHHHHHHHhhh---CCCcEEEeCCHHHHHHHHHHHhcc--------C------CCEEEEcCCCccchHHHHHhh
Q 012321 207 YGNPTTVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVP--------A------GGHIVTTTDCYRKTRIFIETV 269 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~---g~e~~v~~~SG~aAi~~al~all~--------p------GD~VLv~~~~y~~t~~~~~~~ 269 (466)
+.++...+|.++|+++. +.+.+.+++||++|+..++..... . ..+||.....|++........
T Consensus 89 ~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~ 168 (443)
T PRK08297 89 VYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSL 168 (443)
T ss_pred cCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhh
Confidence 45677778888888876 236788899999999998875421 1 257998888887743221111
Q ss_pred c--c---c--CC------cEEEEe--C--C-----------CCHHHHHHhcc--CCCceEEEEeCCCCCCcccc----cH
Q 012321 270 L--P---K--MG------ITATVI--D--P-----------ADMEGLEAALN--NNNVSLFFTESPTNPFLRCV----DV 315 (466)
Q Consensus 270 l--~---~--~g------i~v~~v--d--~-----------~D~e~Le~ai~--~~~tklV~lesPsNPtG~v~----dl 315 (466)
- . . +. +....+ + . .+++++++.+. .+++.+|++|......|.+. -+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl 248 (443)
T PRK08297 169 TNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFF 248 (443)
T ss_pred cCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHH
Confidence 0 0 0 00 100000 0 0 02345556664 23589999988776667653 38
Q ss_pred HHHHHHHHhcCCEEEEeCCCCCC-Cc-----cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHH-HH--HH
Q 012321 316 KLVSDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LH--HV 386 (466)
Q Consensus 316 ~~I~ela~~~gillIvD~t~a~~-~~-----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~-~~--~~ 386 (466)
++|.++|++||+++|+||++... -. ........|+++ ++|.+. ++|++.+++ +.+.+.. +. ..
T Consensus 249 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~-----~~a~l~~~~-i~~~~~~~~~~~~~ 320 (443)
T PRK08297 249 AAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA--FGKKTQ-----VCGIMAGRR-VDEVEDNVFAVSSR 320 (443)
T ss_pred HHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEE--eccccc-----ccceecchH-HHHhhhhhccCccc
Confidence 99999999999999999997532 11 111223468886 689874 356665543 2221111 10 01
Q ss_pred hCC--CchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHc----CCCcE-EEeCCC
Q 012321 387 LGG--ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA----HPKVK-RVHYPG 437 (466)
Q Consensus 387 ~G~--~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~La~~L~~----~p~V~-~V~~Pg 437 (466)
.+. ..+|..+..++..|+.+. ..+++..+..+++.+.|++ +|.+. .|...|
T Consensus 321 ~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G 380 (443)
T PRK08297 321 INSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRG 380 (443)
T ss_pred cCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccc
Confidence 111 235665555555555442 2344555555555555543 55443 444333
No 374
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.68 E-value=6.1e-07 Score=90.74 Aligned_cols=222 Identities=19% Similarity=0.153 Sum_probs=140.4
Q ss_pred CCCccCCC--CchhHHHHHHHH----HhhhCC---Cc--EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchH--HHH
Q 012321 200 ASFEYGRY--GNPTTVVVEEKM----SALEGA---ES--TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTR--IFI 266 (466)
Q Consensus 200 ~~~~Y~R~--~~p~~~~Lee~l----A~l~g~---e~--~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~--~~~ 266 (466)
.+|.-.|| +|...+++|... -+.++. .+ .|---||+-|+..+..++++|+|+|.-.+--.++.. .+.
T Consensus 70 EGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~ 149 (477)
T KOG2467|consen 70 EGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQ 149 (477)
T ss_pred cCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccc
Confidence 34554454 566666554332 234453 23 333469999999999999999999987776666522 111
Q ss_pred HhhcccCCcEEEEe-------C----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 267 ETVLPKMGITATVI-------D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 267 ~~~l~~~gi~v~~v-------d----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
... ++....-.++ | ..|.|.||+.....++|+|+.-.. -.-+..|.+++.++|.+.|++|++|-++
T Consensus 150 T~~-kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~S--aY~R~~DYaR~R~Iad~~gA~Lm~DMAH 226 (477)
T KOG2467|consen 150 TPT-KKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTS--AYSRLIDYARFRKIADKVGAYLMADMAH 226 (477)
T ss_pred cCC-ceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEeccc--cchhhccHHHHHHHHHhcCceeehhhhh
Confidence 111 1111111111 1 247888888766666888886333 3567789999999999999999999996
Q ss_pred CC-----CCccchhccCCcEEEeccccccccccCceEEEEEeCh---------------HHHHHHHHHHH--HhCCCch-
Q 012321 336 AT-----PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG---------------KLVTQIRNLHH--VLGGALN- 392 (466)
Q Consensus 336 a~-----~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~---------------eli~~l~~~~~--~~G~~ls- 392 (466)
.. ++..+|+++ +|||..+.||.|-|+ +||+|.-++ ++-+++..... ..|+.-+
T Consensus 227 ISgLVAA~vipsPFey-~DiVTTTTHKsLRGP---Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNh 302 (477)
T KOG2467|consen 227 ISGLVAAGVIPSPFEY-CDIVTTTTHKSLRGP---RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNH 302 (477)
T ss_pred HHHHHhcccCCCcccc-cceeeccccccccCC---cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcc
Confidence 44 455778887 999999999999999 488886432 12233332111 1222211
Q ss_pred HHHHH-HHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 393 PNAAY-LIIR--GMKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 393 ~~~A~-l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p 428 (466)
...+. .++. .-..+....++..+|++.|++.|.++.
T Consensus 303 tIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~G 341 (477)
T KOG2467|consen 303 TIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRG 341 (477)
T ss_pred hHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11111 1222 233466777888999999999998864
No 375
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.68 E-value=4.2e-06 Score=85.54 Aligned_cols=236 Identities=16% Similarity=0.127 Sum_probs=138.2
Q ss_pred cCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhh-hCCC---------cEEEeCCHHHHHHHHHHHh--ccCCCEE
Q 012321 185 FKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSAL-EGAE---------STVIMASGMSASTVMLLAL--VPAGGHI 252 (466)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l-~g~e---------~~v~~~SG~aAi~~al~al--l~pGD~V 252 (466)
++..+..+......+....|- +-.-...+.+.++++ +|.+ ..+-+.+|+.|+..+..-+ ..+...|
T Consensus 46 l~aV~~Ae~~l~~~~~~k~Yl--~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~v 123 (396)
T COG1448 46 LRAVKKAEKRLLEQEKTKNYL--PIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATV 123 (396)
T ss_pred hHHHHHHHHHhhccccccccC--CcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceE
Confidence 344444444443333222333 222244555555554 4532 2444578888887765443 4556679
Q ss_pred EEcCCCccchHHHHHhhcccCCcEEEEe---C----CCCHHHHHHhccCC-CceEEEE-eCCCCCCccccc---HHHHHH
Q 012321 253 VTTTDCYRKTRIFIETVLPKMGITATVI---D----PADMEGLEAALNNN-NVSLFFT-ESPTNPFLRCVD---VKLVSD 320 (466)
Q Consensus 253 Lv~~~~y~~t~~~~~~~l~~~gi~v~~v---d----~~D~e~Le~ai~~~-~tklV~l-esPsNPtG~v~d---l~~I~e 320 (466)
-+++|+|+.....+ ...|.++..+ | ..|.+.+.+.+++- +..+|++ ..-|||||.-.. .++|.+
T Consensus 124 wis~PtW~NH~~If----~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~ 199 (396)
T COG1448 124 WISDPTWPNHKAIF----EAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELAD 199 (396)
T ss_pred EeCCCCcHhHHHHH----HhcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHH
Confidence 99999999866444 4567776554 3 23666666655431 1234444 455799998764 578999
Q ss_pred HHHhcCCEEEEeCCCC---CCCccchh------ccCC-cEEEeccccccccccCceEEEEEe--ChHHHHH----HHHHH
Q 012321 321 LCHKKGAIVCIDGTFA---TPLNQKAL------SLGA-DLVLHSATKFIGGHNDVLAGSISG--SGKLVTQ----IRNLH 384 (466)
Q Consensus 321 la~~~gillIvD~t~a---~~~~~~pl------~~ga-Divv~S~sK~lgG~gdv~gG~vvg--~~eli~~----l~~~~ 384 (466)
+.+++|.+-++|-+|- .++..+.. ..+. -+|..|+||.|+..+.+.|++.+. +++..++ +....
T Consensus 200 ~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~i 279 (396)
T COG1448 200 LIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAII 279 (396)
T ss_pred HHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHH
Confidence 9999999999999964 34332211 1223 488899999999998877776553 3444443 33333
Q ss_pred HHhCCCchHHHHHHHH----------HhhHHHHHHHHHHHHHHHHHHHHHHc
Q 012321 385 HVLGGALNPNAAYLII----------RGMKTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 385 ~~~G~~ls~~~A~l~l----------rgL~tl~~R~e~~~~na~~La~~L~~ 426 (466)
+..-++++...+.++. .-.+.+....+++.+.++.+.+.|++
T Consensus 280 R~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~ 331 (396)
T COG1448 280 RTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKA 331 (396)
T ss_pred HhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333333333221 11233444556667777888888887
No 376
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.66 E-value=1.4e-06 Score=93.22 Aligned_cols=153 Identities=14% Similarity=0.100 Sum_probs=95.5
Q ss_pred CCchhHHHHHHHHHh----hhC--CCcEEEeCCHHHHHHHHHHHhcc--------------------------CC---CE
Q 012321 207 YGNPTTVVVEEKMSA----LEG--AESTVIMASGMSASTVMLLALVP--------------------------AG---GH 251 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~----l~g--~e~~v~~~SG~aAi~~al~all~--------------------------pG---D~ 251 (466)
+.++....|.++|.+ +.. .+.+.+.+||++|+..++..... +| .+
T Consensus 98 ~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ 177 (464)
T TIGR00699 98 LGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLS 177 (464)
T ss_pred CCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCE
Confidence 556667777777654 433 36788889999999988875421 11 26
Q ss_pred EEEcCCCccchHHH-HHhhc----ccCCc---EEEEeCC-------------------CCHHHHHHhccC--CCceEEEE
Q 012321 252 IVTTTDCYRKTRIF-IETVL----PKMGI---TATVIDP-------------------ADMEGLEAALNN--NNVSLFFT 302 (466)
Q Consensus 252 VLv~~~~y~~t~~~-~~~~l----~~~gi---~v~~vd~-------------------~D~e~Le~ai~~--~~tklV~l 302 (466)
||.....|++.... +...- ...+. .+..++. .+++.+++.+.+ .++.+|++
T Consensus 178 ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~ 257 (464)
T TIGR00699 178 ILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIV 257 (464)
T ss_pred EEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 99988888874322 21110 00011 1111110 134567777742 24899999
Q ss_pred eCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCC----CC--ccchhcc--CCcEEEecccccccc
Q 012321 303 ESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PL--NQKALSL--GADLVLHSATKFIGG 361 (466)
Q Consensus 303 esPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~----~~--~~~pl~~--gaDivv~S~sK~lgG 361 (466)
|......|.+.+ +++|.++|+++|++||+||++.. +. ....... ..||++ ++|.+++
T Consensus 258 EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t--~gK~lg~ 326 (464)
T TIGR00699 258 EPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVT--FSKKFQT 326 (464)
T ss_pred eCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEE--ehhhhcc
Confidence 988877788876 89999999999999999999632 11 1111112 267765 6899964
No 377
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.65 E-value=1.7e-06 Score=89.57 Aligned_cols=204 Identities=12% Similarity=0.040 Sum_probs=124.9
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEe-CCHHHHHHHHHHHhccCCCEEE-EcCCCccchHHHHHhhcccCCcEEEEeC---
Q 012321 210 PTTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIV-TTTDCYRKTRIFIETVLPKMGITATVID--- 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~~-~SG~aAi~~al~all~pGD~VL-v~~~~y~~t~~~~~~~l~~~gi~v~~vd--- 281 (466)
...+..++.|.++++.+ +++++ ++|+.++.++.+.++.+||+++ +....+.+.. +. ..++++| ++..+.
T Consensus 49 ~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r-~~-~ea~~~g-~v~~~~~~~ 125 (364)
T PRK12462 49 SLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRK-AI-GEASRVA-AMRVVWDGA 125 (364)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHH-HH-HHHHhcC-CceEecCcC
Confidence 34566788888888862 35554 4567999999999999999655 4334444433 22 3344555 333332
Q ss_pred ------CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccchhccCCcEEEec
Q 012321 282 ------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (466)
Q Consensus 282 ------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-~~~pl~~gaDivv~S 354 (466)
..+++++ .+.+ +.+.|++++-...+|...+ ++.+.+++++|+|.+-..+. ..+.-+ .|+++.+
T Consensus 126 ~~~~~~~p~~~~~--~~~~-d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~--~dvi~ag 195 (364)
T PRK12462 126 ASGYRTLPSLAEL--DWDA-RAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEA--YGMVYAH 195 (364)
T ss_pred CCCCCcCCCHHHh--ccCC-CCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHH--ccEEEee
Confidence 1234444 2333 2677777555556788875 33334689999999844321 122223 3999999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHH-------HH-----HhCCCchHHHHHHHHHhhHH-------HHHHHHHHHH
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HH-----VLGGALNPNAAYLIIRGMKT-------LHLRVQQQNS 415 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~-------~~-----~~G~~ls~~~A~l~lrgL~t-------l~~R~e~~~~ 415 (466)
..|.+|++| .++++.+++++++.... +. ..-.+++.+.-|.+...+++ ++.+.+++.+
T Consensus 196 sQKnlgP~G---ltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ 272 (364)
T PRK12462 196 AQKNLGPAG---VTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINAR 272 (364)
T ss_pred ccccCCCCc---eEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 999999665 46888888887664421 10 01123333444444334333 3456678889
Q ss_pred HHHHHHHHHHcCCC
Q 012321 416 TALRMAKILEAHPK 429 (466)
Q Consensus 416 na~~La~~L~~~p~ 429 (466)
.++.+.+++++.+.
T Consensus 273 ka~~ly~~id~~~~ 286 (364)
T PRK12462 273 KAAMLYATLDALNE 286 (364)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999873
No 378
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.62 E-value=6.4e-06 Score=84.46 Aligned_cols=198 Identities=15% Similarity=0.172 Sum_probs=109.4
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHH-HHHHHHHH-Hhc---c---------CCCEEEEcCCCccchHHHHHhhcccC
Q 012321 210 PTTVVVEEKMSALEGA--ESTVIMASGM-SASTVMLL-ALV---P---------AGGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~--e~~v~~~SG~-aAi~~al~-all---~---------pGD~VLv~~~~y~~t~~~~~~~l~~~ 273 (466)
.-..++++.+++++|. ++.++..+.+ .-+.-++. +++ . +.-+.|++.|.|-..+. +.+.+
T Consensus 69 ~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa----i~E~~ 144 (425)
T PF12897_consen 69 DGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA----ITEHF 144 (425)
T ss_dssp S--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH----HHHHC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH----HHHhh
Confidence 3467889999999997 5666666655 33333222 221 1 12368999999987664 45568
Q ss_pred CcEEEEeC----CCCHHHHHHhcc-CCCceEEEEeCC--CCCCcccccHHHHHHHH----HhcCCEEEEeCCCCCCCcc-
Q 012321 274 GITATVID----PADMEGLEAALN-NNNVSLFFTESP--TNPFLRCVDVKLVSDLC----HKKGAIVCIDGTFATPLNQ- 341 (466)
Q Consensus 274 gi~v~~vd----~~D~e~Le~ai~-~~~tklV~lesP--sNPtG~v~dl~~I~ela----~~~gillIvD~t~a~~~~~- 341 (466)
|++...|+ ..|.+.+++.+. +..+|.||+ .| +||+|.++.-+.+.++| ...+..++.||+|+...+.
T Consensus 145 Giemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWc-VP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~ 223 (425)
T PF12897_consen 145 GIEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWC-VPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYD 223 (425)
T ss_dssp T-EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE--SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSS
T ss_pred CcEEEecCCCCCCCCHHHHHHHHhcCCccceEEe-CCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccc
Confidence 98887775 458999999984 334898886 66 59999999766555555 3578999999998754331
Q ss_pred --------chh----ccC---CcEEEeccccc-cccccCceEEEEEeChHHHHHHHHHHHHhCCCch---HHHHHHHHHh
Q 012321 342 --------KAL----SLG---ADLVLHSATKF-IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN---PNAAYLIIRG 402 (466)
Q Consensus 342 --------~pl----~~g---aDivv~S~sK~-lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls---~~~A~l~lrg 402 (466)
+.+ +.| .-+++.|+||. |.|.| .+++.++++-++.+++.......... ++.-...++.
T Consensus 224 ~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaG---va~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d 300 (425)
T PF12897_consen 224 EEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAG---VAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFKD 300 (425)
T ss_dssp SSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS----EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHS
T ss_pred cccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcc---eeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhcC
Confidence 111 112 23788999995 55554 47888898888877766554443333 3322233344
Q ss_pred hH-HHHHHHHHHHH
Q 012321 403 MK-TLHLRVQQQNS 415 (466)
Q Consensus 403 L~-tl~~R~e~~~~ 415 (466)
.+ .+...|++|.+
T Consensus 301 ~~gGv~aHM~kHa~ 314 (425)
T PF12897_consen 301 AEGGVRAHMRKHAA 314 (425)
T ss_dssp HHTHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHH
Confidence 44 55566666654
No 379
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.32 E-value=9.9e-06 Score=83.67 Aligned_cols=153 Identities=16% Similarity=0.195 Sum_probs=96.5
Q ss_pred CcEEEeCCHH-HHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--------CCHHHHHHhccC
Q 012321 226 ESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNN 294 (466)
Q Consensus 226 e~~v~~~SG~-aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--------~D~e~Le~ai~~ 294 (466)
..+++++-.+ .++.+.++++. ..++.|+.+.-.+.+.+..+ ...|.++..++. .|.+.+++.+++
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai----~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~ 150 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAI----ERAGLEPVVVENVLEGDELITDLEAIEAKIEE 150 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHH----HHTT-EEEEE-EEEETTEEEEHHHHHHHHHHH
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHH----HhcCCeEEEeeccCCCCeeeccHHHHHHHHHH
Confidence 5677775444 46666776664 56788998877776655433 234666655542 256777777753
Q ss_pred --CCceEEEEeCCCCCCccccc-HHHHHHHHHhcCCEEEEeCCCCCCC------ccchhccC-CcEEEeccccccccccC
Q 012321 295 --NNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFATPL------NQKALSLG-ADLVLHSATKFIGGHND 364 (466)
Q Consensus 295 --~~tklV~lesPsNPtG~v~d-l~~I~ela~~~gillIvD~t~a~~~------~~~pl~~g-aDivv~S~sK~lgG~gd 364 (466)
....+.++.+++-..++..| +++|+++|+++|++.++-++|+--. .++....| .|+++.|+-|-|--+.
T Consensus 151 ~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPv- 229 (389)
T PF05889_consen 151 LGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPV- 229 (389)
T ss_dssp HCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEES-
T ss_pred hCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecC-
Confidence 12578888899888899988 9999999999999999999998521 13333444 6999999999886653
Q ss_pred ceEEEEEe-ChHHHHHHHHHH
Q 012321 365 VLAGSISG-SGKLVTQIRNLH 384 (466)
Q Consensus 365 v~gG~vvg-~~eli~~l~~~~ 384 (466)
.++.+.+ ++..+..+.+..
T Consensus 230 -Ggai~As~~~~~i~~vs~~Y 249 (389)
T PF05889_consen 230 -GGAIMASFDPSGILAVSKEY 249 (389)
T ss_dssp -SHEEEEESSHHHHHHHHHTS
T ss_pred -CCcEEEecCHHHHHHHHHHh
Confidence 2334444 456777666543
No 380
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.27 E-value=4e-05 Score=79.90 Aligned_cols=240 Identities=15% Similarity=0.226 Sum_probs=146.1
Q ss_pred HHHHHhcccCCCccCCCCchhHHHHHHH----HHhhhC-----------CCcEEEeCCHHHHHHHHHHHhc-------cC
Q 012321 191 LIDFKEKRRASFEYGRYGNPTTVVVEEK----MSALEG-----------AESTVIMASGMSASTVMLLALV-------PA 248 (466)
Q Consensus 191 ~~~~~~~~~~~~~Y~R~~~p~~~~Lee~----lA~l~g-----------~e~~v~~~SG~aAi~~al~all-------~p 248 (466)
+.+...+..+.-.++-...|...+||.. |+++.+ ....++.++.+++...++.+.. +.
T Consensus 90 ladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~ 169 (511)
T KOG0628|consen 90 LADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKS 169 (511)
T ss_pred HHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhc
Confidence 4444555444445555578999999854 444433 2457889999877766665431 22
Q ss_pred CC-----------E-EEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC----ceEEEEeCCCC
Q 012321 249 GG-----------H-IVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN----VSLFFTESPTN 307 (466)
Q Consensus 249 GD-----------~-VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-----~D~e~Le~ai~~~~----tklV~lesPsN 307 (466)
++ - +-+++..|.+. +...-..+++++.+.. .+.+.|+++|.++. +-.+++-+..
T Consensus 170 ~~p~~~e~~~~~~lV~Y~SDqahssv----eka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G- 244 (511)
T KOG0628|consen 170 RPPELHESSVLARLVAYCSDQAHSSV----EKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG- 244 (511)
T ss_pred CCCcccchhhhhhheEEecCcccchH----HHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec-
Confidence 21 1 23344445443 2333334666666643 25777887776431 2344443333
Q ss_pred CCccc--ccHHHHHHHHHhcCCEEEEeCCCCCCCcc----chhccC---CcEEEeccccccccccCceEEEE--------
Q 012321 308 PFLRC--VDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLG---ADLVLHSATKFIGGHNDVLAGSI-------- 370 (466)
Q Consensus 308 PtG~v--~dl~~I~ela~~~gillIvD~t~a~~~~~----~pl~~g---aDivv~S~sK~lgG~gdv~gG~v-------- 370 (466)
-|+.+ -++++|..+|+++|+||+||.+|+..... +.+-.| +|-+-...||++--+-|.-.=|+
T Consensus 245 TT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~ 324 (511)
T KOG0628|consen 245 TTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSR 324 (511)
T ss_pred CccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeee
Confidence 34444 36999999999999999999999865442 222223 56777778898876655422222
Q ss_pred --EeChHHHHH--------HHHHHHHhCCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeC
Q 012321 371 --SGSGKLVTQ--------IRNLHHVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 435 (466)
Q Consensus 371 --vg~~eli~~--------l~~~~~~~G~~ls~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~ 435 (466)
-.++.+++. ++.++-.+|...-.+.-|..+| |.+.+..++.++.+.++.+-+.+.+-+..+.+.-
T Consensus 325 ~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~ 401 (511)
T KOG0628|consen 325 AFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNK 401 (511)
T ss_pred eeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecc
Confidence 122222211 1223334455556677787776 7889999999999999999998888887665543
No 381
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.16 E-value=3.6e-05 Score=80.32 Aligned_cols=239 Identities=16% Similarity=0.144 Sum_probs=144.7
Q ss_pred hhHHHHH----HHHHhhhCCCc---EEEeCCHHHHHHHHHHHh---cc--CC---CEEEEcCCCccchHHHHHhhcccCC
Q 012321 210 PTTVVVE----EKMSALEGAES---TVIMASGMSASTVMLLAL---VP--AG---GHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 210 p~~~~Le----e~lA~l~g~e~---~v~~~SG~aAi~~al~al---l~--pG---D~VLv~~~~y~~t~~~~~~~l~~~g 274 (466)
|..+.++ ..++.++++.. ...+++|++++.++.... .. .| ..++++..++. .++.....++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~----a~eK~a~yf~ 191 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHA----AFEKAARYFE 191 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHH----HHHHHHhhEE
Confidence 4455554 44667777633 223455567755544332 11 12 23454444333 3445555567
Q ss_pred cEEEEeCC------CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh-cCCEEEEeCCCCCCCc----cch
Q 012321 275 ITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLN----QKA 343 (466)
Q Consensus 275 i~v~~vd~------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~-~gillIvD~t~a~~~~----~~p 343 (466)
++++.++. .|+..+.+.++++ |.+|+.+.|+-|+|.+-|+++|.++.-+ +++.+++|.+-+.++. ...
T Consensus 192 v~l~~V~~~~~~~~~D~~k~~~~i~eN-ti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~ 270 (491)
T KOG1383|consen 192 VELREVPLDEGDYRVDPGKVVRMIDEN-TIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE 270 (491)
T ss_pred EEEEeeeccccceEecHHHHHHHhccc-eEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence 77666653 3899999999985 9999999999999999999999999998 9999999999665433 111
Q ss_pred --hcc---CCcEEEeccccccccccCceEEEEE-eChHHH-HHHHHHHHHhCC----------Cch--HHHHHHHH--Hh
Q 012321 344 --LSL---GADLVLHSATKFIGGHNDVLAGSIS-GSGKLV-TQIRNLHHVLGG----------ALN--PNAAYLII--RG 402 (466)
Q Consensus 344 --l~~---gaDivv~S~sK~lgG~gdv~gG~vv-g~~eli-~~l~~~~~~~G~----------~ls--~~~A~l~l--rg 402 (466)
+++ |+--+..+.|||--.+.+ .|+++ .++++. .++......+|+ ..+ -..+|..+ -|
T Consensus 271 ~~fdFr~p~V~Sisa~~HKYGl~~~G--~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG 348 (491)
T KOG1383|consen 271 EEFDFRVPGVTSISADGHKYGLAPAG--SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLG 348 (491)
T ss_pred cccccCCCCceeEeeccceeeeeecC--cEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhh
Confidence 222 233455678998543332 34554 444433 232222222221 111 23455443 45
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCC-------CCCcchHHHHhhcCCcce
Q 012321 403 MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL-------KSHPEHHIATQQMTGFGG 456 (466)
Q Consensus 403 L~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL-------~s~p~~~l~~~~~~g~Gg 456 (466)
-+.....++++.++++.|.+.+++.+.+.-+.-|.. ..++.|++... |+.+|.
T Consensus 349 ~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~i~elsd~-l~~~GW 408 (491)
T KOG1383|consen 349 EEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVNIFELSDL-LRKKGW 408 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccchhhhhHH-HHhcCc
Confidence 667788899999999999999999877655544432 23555655433 344443
No 382
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.13 E-value=4.9e-05 Score=78.55 Aligned_cols=206 Identities=15% Similarity=0.142 Sum_probs=127.3
Q ss_pred HHHhhhCC---CcEEEeCCHHHHH-HHHHHHhc--cC-----C-----CEE-EEcCCCccchHHHHHhhcccCC---cEE
Q 012321 218 KMSALEGA---ESTVIMASGMSAS-TVMLLALV--PA-----G-----GHI-VTTTDCYRKTRIFIETVLPKMG---ITA 277 (466)
Q Consensus 218 ~lA~l~g~---e~~v~~~SG~aAi-~~al~all--~p-----G-----D~V-Lv~~~~y~~t~~~~~~~l~~~g---i~v 277 (466)
++-++.|. .+.++.++|+-++ .++..+-- -| | +-| .+++.+|.+... ....+| -.+
T Consensus 149 km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~k----aAa~lg~gtd~c 224 (510)
T KOG0629|consen 149 KMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKK----AAAFLGLGTDHC 224 (510)
T ss_pred HHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHH----HHHHhccCCcee
Confidence 33444454 4789998998444 33332211 11 2 223 344566665432 222333 233
Q ss_pred EEeCC-----CCHHHHHHhccCCC-----ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchh---
Q 012321 278 TVIDP-----ADMEGLEAALNNNN-----VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL--- 344 (466)
Q Consensus 278 ~~vd~-----~D~e~Le~ai~~~~-----tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl--- 344 (466)
..++. .++++||+.|-..+ +-+|-...-+...|..-|++.|+++|++|+.|++||.+|+.+++....
T Consensus 225 ~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~ 304 (510)
T KOG0629|consen 225 IKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRH 304 (510)
T ss_pred EEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHh
Confidence 34442 36889998875322 334444334455688889999999999999999999999987653221
Q ss_pred -c---cCCcEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHH---------------------HhCCCchHHHHHH
Q 012321 345 -S---LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHH---------------------VLGGALNPNAAYL 398 (466)
Q Consensus 345 -~---~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~---------------------~~G~~ls~~~A~l 398 (466)
- .-+|.|..+.||++|.+- -.+..+.+. .++++...... ..|...+.+.-|+
T Consensus 305 kl~Giera~SvtwnpHK~~gapl--qCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWl 382 (510)
T KOG0629|consen 305 KLTGIERANSVTWNPHKLMGAPL--QCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWL 382 (510)
T ss_pred hccCccccCceeecHHHhhcCcc--hhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHH
Confidence 1 136889999999998764 234443333 23333221110 2344566777888
Q ss_pred HHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012321 399 IIR--GMKTLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 399 ~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~ 429 (466)
..+ |.+.++.++++..++|+++.+.|++.+.
T Consensus 383 mwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~ 415 (510)
T KOG0629|consen 383 MWKAKGTQGFEAQVDKCLRLAEYLYDRLREREG 415 (510)
T ss_pred HHHhcccccHHHHHHHHHHHHHHHHHHHHhccc
Confidence 764 6677889999999999999999998754
No 383
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.96 E-value=6.5e-05 Score=76.18 Aligned_cols=173 Identities=14% Similarity=0.157 Sum_probs=89.6
Q ss_pred hhHHHHHHHHHhhh---CC----CcEEEeCCHH-HHHHHHHHHhccC--C----CEEEEcCCCccchHHHHHhhcccCCc
Q 012321 210 PTTVVVEEKMSALE---GA----ESTVIMASGM-SASTVMLLALVPA--G----GHIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 210 p~~~~Lee~lA~l~---g~----e~~v~~~SG~-aAi~~al~all~p--G----D~VLv~~~~y~~t~~~~~~~l~~~gi 275 (466)
-...+|++.|.+|+ |. ..-|++++|+ +.+++++.+|... . -+|+...|.|+...... ..++....
T Consensus 43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt-~~f~s~~y 121 (363)
T PF04864_consen 43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQT-DFFDSRLY 121 (363)
T ss_dssp TS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHC-CCT-BTTE
T ss_pred eccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHH-HhccccCc
Confidence 34557777777765 32 4678888887 8888888887543 1 26888888887644322 33443333
Q ss_pred EEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc-hhccCCcEEEec
Q 012321 276 TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-ALSLGADLVLHS 354 (466)
Q Consensus 276 ~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~-pl~~gaDivv~S 354 (466)
+.. -|... ....=+. .+-+=++++||||.|.+-. . +++.-+..+|.|-+|--|.... +...+-||.+++
T Consensus 122 ~w~-Gda~~---~~~~~~~-~~~IElVTSPNNPDG~lr~--~---V~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT 191 (363)
T PF04864_consen 122 KWA-GDASN---FKNSDNP-SPYIELVTSPNNPDGQLRE--A---VLNGSSGKVIHDLAYYWPHYTPITAPADHDIMLFT 191 (363)
T ss_dssp EEE-EECCC---GTT-S-C-CGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-B--SEEEEE
T ss_pred ccc-ccHHh---hccCCCC-CCeEEEEeCCCCCcccccc--h---hcCCCCcceeeeeeeecccccccCCCCCCceEEEE
Confidence 322 11111 1111011 2456678899999998632 1 2345567789999976554321 112345899999
Q ss_pred cccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHH
Q 012321 355 ATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPN 394 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~ 394 (466)
+||.= ||.+.+.||.+. ++++.+++..+......+.+-.
T Consensus 192 ~SK~T-GHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~d 231 (363)
T PF04864_consen 192 LSKLT-GHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRD 231 (363)
T ss_dssp HHHHC-S-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HH
T ss_pred Eeccc-CccccccceeeecCHHHHHHHHHHHHHhcccCcHH
Confidence 99975 455556677655 5577788877665544444443
No 384
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.85 E-value=0.0002 Score=77.30 Aligned_cols=250 Identities=20% Similarity=0.207 Sum_probs=150.3
Q ss_pred hHHHHHHHHHhhhCCCcEEEe-CCHHHH---HHHHHHHhc-cCCC----EEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 211 TTVVVEEKMSALEGAESTVIM-ASGMSA---STVMLLALV-PAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~e~~v~~-~SG~aA---i~~al~all-~pGD----~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
....||+.|.++.|-+..-+. .||.+. =..++++.+ ..|+ .-+++...|+.... .....|.++..++
T Consensus 583 lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA----SA~MagmkvvpV~ 658 (1001)
T KOG2040|consen 583 LFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA----SAAMAGMKVVPVG 658 (1001)
T ss_pred HHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh----hHHhcCCEEEEee
Confidence 456788888888887766555 456532 233445543 3443 35777777877542 2334577777665
Q ss_pred C-----CCHHHHHHhccCC--CceEEEEeCCCCCCccc-ccHHHHHHHHHhcCCEEEEeCCCCC--CCccchhccCCcEE
Q 012321 282 P-----ADMEGLEAALNNN--NVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLV 351 (466)
Q Consensus 282 ~-----~D~e~Le~ai~~~--~tklV~lesPsNPtG~v-~dl~~I~ela~~~gillIvD~t~a~--~~~~~pl~~gaDiv 351 (466)
. .|..+|++..+++ +..++++..|+. .|.. .++++++++.|+||.-|..|.+-.. --+.+|-+.|+|+.
T Consensus 659 ~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~ 737 (1001)
T KOG2040|consen 659 CDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVC 737 (1001)
T ss_pred ccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccce
Confidence 3 3778887766543 367889988984 3433 4699999999999999999998432 12468889999999
Q ss_pred Eecccccccccc---CceEEEEEeChHHHHHHHHHH----------H--------HhCCC--chHHHHHHHHHhhHHHHH
Q 012321 352 LHSATKFIGGHN---DVLAGSISGSGKLVTQIRNLH----------H--------VLGGA--LNPNAAYLIIRGMKTLHL 408 (466)
Q Consensus 352 v~S~sK~lgG~g---dv~gG~vvg~~eli~~l~~~~----------~--------~~G~~--ls~~~A~l~lrgL~tl~~ 408 (466)
--.+||+|.-+. +-.+|-|..++.+...|-..- . .+|+. +.---+|+-..|.+-|..
T Consensus 738 HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~ 817 (1001)
T KOG2040|consen 738 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKD 817 (1001)
T ss_pred eecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccccch
Confidence 999999985221 112344433433332221100 0 11211 111234554445555544
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCC---------------cchHHHHhhc-CCc-ceEEEEEecee
Q 012321 409 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSH---------------PEHHIATQQM-TGF-GGVVSFEVCVF 465 (466)
Q Consensus 409 R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~---------------p~~~l~~~~~-~g~-Ggl~sfel~~~ 465 (466)
--+-..-|+.++++.|+.|=++....--++-.| .--+++||.| -|| +..+|+-+.|+
T Consensus 818 as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmswPV~gt 891 (1001)
T KOG2040|consen 818 ASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWPVAGT 891 (1001)
T ss_pred hhHHHhhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccccccCCc
Confidence 444556689999999999866544333332211 1235788888 354 55566555544
No 385
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.67 E-value=0.00015 Score=78.17 Aligned_cols=137 Identities=20% Similarity=0.359 Sum_probs=100.2
Q ss_pred HHHHHhhhCC--CcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhc
Q 012321 216 EEKMSALEGA--ESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAAL 292 (466)
Q Consensus 216 ee~lA~l~g~--e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai 292 (466)
+..++++.|- .++-++--|++|-.++.++. ..++.+.++...+|+.+...++.-.+.+|+++... |+++....
T Consensus 169 QTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~---~~~~~~~s- 244 (1001)
T KOG2040|consen 169 QTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS---DIKEADYS- 244 (1001)
T ss_pred HHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEec---CHHHhhcc-
Confidence 4456677774 46667778886655555443 45667899999999999988877777888886543 44444332
Q ss_pred cCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC-CCCCCccchhccCCcEEEeccccc
Q 012321 293 NNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATKF 358 (466)
Q Consensus 293 ~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t-~a~~~~~~pl~~gaDivv~S~sK~ 358 (466)
.+ .+..|++..|. --|.+.|.+++++.+++.|.++++--- .+--++..|.++|+||++.|...+
T Consensus 245 ~~-~v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 245 SK-DVSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred cc-ceeEEEEEcCC-CCCcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeecccccc
Confidence 23 38899998887 469999999999999999987665432 222345678899999999998764
No 386
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.66 E-value=0.00014 Score=72.45 Aligned_cols=161 Identities=16% Similarity=0.206 Sum_probs=115.1
Q ss_pred HHHHHHHhhhCC-CcEEEe-CCHHHHHHHHHHHhccCCC---EEEEcCCCccchHHHHHhhcccCCcEEE----EeCC--
Q 012321 214 VVEEKMSALEGA-ESTVIM-ASGMSASTVMLLALVPAGG---HIVTTTDCYRKTRIFIETVLPKMGITAT----VIDP-- 282 (466)
Q Consensus 214 ~Lee~lA~l~g~-e~~v~~-~SG~aAi~~al~all~pGD---~VLv~~~~y~~t~~~~~~~l~~~gi~v~----~vd~-- 282 (466)
-+-..++.+.|+ ++.+.+ .+=+.-+..++.++.+|-. +|+...-.|++-+..++..++..|+.+. .+++
T Consensus 115 ~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePRE 194 (465)
T KOG3846|consen 115 PILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPRE 194 (465)
T ss_pred hhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccc
Confidence 345567777887 444444 4444556666777777653 6899999999877677666776676532 2221
Q ss_pred ----CCHHHHHHhccCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC-CccchhccCCcEEEecc
Q 012321 283 ----ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (466)
Q Consensus 283 ----~D~e~Le~ai~~~--~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~-~~~~pl~~gaDivv~S~ 355 (466)
...+++.+.|..+ ...+|++.-.+-.||...|+.+|.+.-+..|+++-.|-+++.+ +....-.+|+|+.+...
T Consensus 195 GEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCS 274 (465)
T KOG3846|consen 195 GEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCS 274 (465)
T ss_pred cccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEee
Confidence 1345566556432 3789999889999999999999997777789999999987754 44455578999999999
Q ss_pred ccccccccCceEEEEEeCh
Q 012321 356 TKFIGGHNDVLAGSISGSG 374 (466)
Q Consensus 356 sK~lgG~gdv~gG~vvg~~ 374 (466)
.||++.+.+-+||..+-.+
T Consensus 275 YKYlnaGaGgIgGlFvHek 293 (465)
T KOG3846|consen 275 YKYLNAGAGGIGGLFVHEK 293 (465)
T ss_pred ecccccCCCccceeeeehh
Confidence 9999866555788877654
No 387
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.58 E-value=0.0046 Score=62.05 Aligned_cols=148 Identities=17% Similarity=0.163 Sum_probs=90.8
Q ss_pred EEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhcccCCc-E---EEEeC----CCCHHHHHHhccCCCc
Q 012321 228 TVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGI-T---ATVID----PADMEGLEAALNNNNV 297 (466)
Q Consensus 228 ~v~~~SG~aAi~~al~al--l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi-~---v~~vd----~~D~e~Le~ai~~~~t 297 (466)
.+-.-||+.|+.....-+ .-....|-++.|++......+ ++.|. + ..+.| ..|++.+...|+..+.
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if----~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe 177 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIF----EKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPE 177 (410)
T ss_pred ceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHH----HHcCCceeeeeeeecCCCceecHHHHHHHHhhCCC
Confidence 344457777766554322 233567999999998866544 34452 2 23333 3477877777754323
Q ss_pred e-EEEEeC-CCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccch----------hccCC-cEEEecccccccc
Q 012321 298 S-LFFTES-PTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGA-DLVLHSATKFIGG 361 (466)
Q Consensus 298 k-lV~les-PsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~p----------l~~ga-Divv~S~sK~lgG 361 (466)
. ++++.. .+||||.-.. ...|++..++++...+.|-+|-.....++ .+.|. -+|+.||.|-+|.
T Consensus 178 ~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGl 257 (410)
T KOG1412|consen 178 GSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGL 257 (410)
T ss_pred CcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhccc
Confidence 3 444433 3799997543 56788888899999999999643322111 12343 2889999999998
Q ss_pred ccCceEEE--EEeChHHHHH
Q 012321 362 HNDVLAGS--ISGSGKLVTQ 379 (466)
Q Consensus 362 ~gdv~gG~--vvg~~eli~~ 379 (466)
.+...|-+ ++-++..+..
T Consensus 258 YneRvGnltvv~~n~a~i~~ 277 (410)
T KOG1412|consen 258 YNERVGNLTVVVNNPAVIAG 277 (410)
T ss_pred ccccccceEEEecChhHHHH
Confidence 88765543 2334444433
No 388
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.13 E-value=0.0022 Score=64.03 Aligned_cols=207 Identities=15% Similarity=0.192 Sum_probs=115.6
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCccchHHHHHhh----ccc-CCcE-EEEe
Q 012321 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETV----LPK-MGIT-ATVI 280 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al---l~pGD~VLv~~~~y~~t~~~~~~~----l~~-~gi~-v~~v 280 (466)
..++-.+...+.+-+-.-++++.||++|+.++++.. .+..| ||+.+..|.+.......+ +.. -++. .+++
T Consensus 87 ~lv~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~V 165 (452)
T KOG1403|consen 87 ELVQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYV 165 (452)
T ss_pred HHHHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCcee
Confidence 344444555555555577889999999999988753 34444 555566666532211110 000 1111 1111
Q ss_pred ---CC---------------CC-----HHHHHHhccC-----CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCE
Q 012321 281 ---DP---------------AD-----MEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (466)
Q Consensus 281 ---d~---------------~D-----~e~Le~ai~~-----~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gil 328 (466)
+. .| .+.+++.+++ ..+.+.+.|+-.+=.|.+.+ .+++++..|.+|.+
T Consensus 166 HVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv 245 (452)
T KOG1403|consen 166 HVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGV 245 (452)
T ss_pred EecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCe
Confidence 11 01 2334443321 13556666777666787775 57889999999999
Q ss_pred EEEeCCCCCC-------CccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHH----HHHHhCCCchHHHHH
Q 012321 329 VCIDGTFATP-------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN----LHHVLGGALNPNAAY 397 (466)
Q Consensus 329 lIvD~t~a~~-------~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~----~~~~~G~~ls~~~A~ 397 (466)
.|.||++..+ +.......-.|||+ +.|-+|-.- ..+.+++.+++.+.+.. +.+.+|+ +|..+.
T Consensus 246 ~IaDEVQvGFGRvG~hyWafq~y~fiPDIVt--mgKpmGNGh--PVa~VattkeIA~Af~atgv~YFNTyGG--nPVsCA 319 (452)
T KOG1403|consen 246 CIADEVQVGFGRVGSHYWAFQTYNFIPDIVT--MGKPMGNGH--PVAAVATTKEIAQAFHATGVEYFNTYGG--NPVSCA 319 (452)
T ss_pred EEeehhhhcccccchhhhhhhhhccccchhe--ecccCCCCC--eeeEEeccHHHHHHhccccceehhccCC--CchhHH
Confidence 9999995321 11222333357775 678776332 35788888998887764 3344555 455555
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 012321 398 LIIRGMKTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 398 l~lrgL~tl~~R~e~~~~na~~La~~L~ 425 (466)
..+.-|+-++ -+..+++++++-++|.
T Consensus 320 v~laVm~v~e--~E~Lq~ha~~vG~~L~ 345 (452)
T KOG1403|consen 320 VGLAVMRVCE--DENLQEHAQQVGEKLE 345 (452)
T ss_pred HHHHHHHHHh--hhhHHHHHHHHHHHHH
Confidence 5444444333 2344555555555443
No 389
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.01 E-value=0.011 Score=60.40 Aligned_cols=226 Identities=19% Similarity=0.201 Sum_probs=127.3
Q ss_pred HHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccC-----CCEEEEcCCCccchH
Q 012321 189 AELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA-----GGHIVTTTDCYRKTR 263 (466)
Q Consensus 189 ~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~p-----GD~VLv~~~~y~~t~ 263 (466)
+++...+.+.+ .|+ ++-....|++.+.+.+|-+..+-+.-|-.|=..++..++++ |.+.++..+.|..|.
T Consensus 63 ~qwaamm~GDE---AYa--gsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTT 137 (471)
T COG3033 63 KQWAAMMRGDE---AYA--GSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTT 137 (471)
T ss_pred HHHHHHhccch---hhc--ccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecch
Confidence 44555554432 355 44567899999999999877777777776666666556654 445566666666554
Q ss_pred HHHHhhcccCCcEEEE--e-------------CCCCHHHHHHhccC---CCceEEEEeCCCCCC-cccc---cHHHHHHH
Q 012321 264 IFIETVLPKMGITATV--I-------------DPADMEGLEAALNN---NNVSLFFTESPTNPF-LRCV---DVKLVSDL 321 (466)
Q Consensus 264 ~~~~~~l~~~gi~v~~--v-------------d~~D~e~Le~ai~~---~~tklV~lesPsNPt-G~v~---dl~~I~el 321 (466)
+.-.. ..|....- + ...|++.|++.|++ +++-.|++.-.+|.. |... +++++.++
T Consensus 138 r~h~~---~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~i 214 (471)
T COG3033 138 RGHIQ---INGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEI 214 (471)
T ss_pred hHHHH---hcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHH
Confidence 33211 11211110 1 12378899988864 235566664445543 5544 57899999
Q ss_pred HHhcCCEEEEeCC-CCCC-Cc--cc---------------hhccCCcEEEeccccccccccCceEEEEEeChH----HHH
Q 012321 322 CHKKGAIVCIDGT-FATP-LN--QK---------------ALSLGADLVLHSATKFIGGHNDVLAGSISGSGK----LVT 378 (466)
Q Consensus 322 a~~~gillIvD~t-~a~~-~~--~~---------------pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~e----li~ 378 (466)
|++|++.++.|.+ |+.. ++ ++ .+. .+|-.+-|.-|-- +-. +||++..+++ +..
T Consensus 215 a~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~s-YaD~~~mS~KKD~--lvn-mGGfl~~~D~~~fDvy~ 290 (471)
T COG3033 215 AKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYS-YADGCTMSAKKDG--LVN-MGGFLCFKDDSFFDVYE 290 (471)
T ss_pred HHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHh-hhhhheeeccccc--eec-cccEEEecCccHHHHHH
Confidence 9999999999988 3321 11 10 111 3677778887742 221 5899988765 555
Q ss_pred HHHHHHH------HhCCCchHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHcC
Q 012321 379 QIRNLHH------VLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 379 ~l~~~~~------~~G~~ls~~~A~l~lrgL~tl--~~R~e~~~~na~~La~~L~~~ 427 (466)
.++.... ..|+...-....+ ..||+.- ...++...+..++|++.|++.
T Consensus 291 ~~~~~~V~~eG~~tYGgl~Grdmeal-AvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 291 ECRTLVVVQEGFPTYGGLAGRDMEAL-AVGLREGVNFDYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred HHHhheEeeccccccCcccchhHHHH-HHHHHHhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 5554322 2232222221222 2233321 112233334456788888875
No 390
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.00 E-value=0.032 Score=56.89 Aligned_cols=240 Identities=14% Similarity=0.134 Sum_probs=130.1
Q ss_pred CCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhh-hCC------CcEEE---eCCHH--HHHHHHHHHhccCC
Q 012321 182 AYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSAL-EGA------ESTVI---MASGM--SASTVMLLALVPAG 249 (466)
Q Consensus 182 t~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l-~g~------e~~v~---~~SG~--aAi~~al~all~pG 249 (466)
.|+++.....+....+..-.-.|-... ...++.+.-+++ +|. +.-++ .-||+ -.+.+-+++..-++
T Consensus 69 p~vL~~VrkAE~ql~~~~ldKEYlpI~--Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~ 146 (427)
T KOG1411|consen 69 PYVLPSVRKAEQQLASLSLDKEYLPIT--GLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPS 146 (427)
T ss_pred eeeeHHHHHHHHHHhhhcccchhcccc--chHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccc
Confidence 356666665555444433334555432 233444444443 332 22222 23555 44555555666678
Q ss_pred CEEEEcCCCccchHHHHHhhcccCCcEEEEe---C----CCCHHHHHHhccCCCc-eEEEE-eCCCCCCcccc---cHHH
Q 012321 250 GHIVTTTDCYRKTRIFIETVLPKMGITATVI---D----PADMEGLEAALNNNNV-SLFFT-ESPTNPFLRCV---DVKL 317 (466)
Q Consensus 250 D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v---d----~~D~e~Le~ai~~~~t-klV~l-esPsNPtG~v~---dl~~ 317 (466)
..|.+++|+|+... .+.+..|+.+.++ + ..|.+.+.+.+.+... ..|++ ..-+||||.-. ..++
T Consensus 147 ~~I~ip~PTWgNh~----~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~k 222 (427)
T KOG1411|consen 147 RDIYIPDPTWGNHK----NIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEK 222 (427)
T ss_pred cceeecCCcccccC----ccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHH
Confidence 99999999999854 3445556665443 3 2355554444433211 22332 34579999754 3678
Q ss_pred HHHHHHhcCCEEEEeCCCCCCCccch----------hccCCc-EEEeccccccccccCceEEE-EEe-ChHHHHHHH---
Q 012321 318 VSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGAD-LVLHSATKFIGGHNDVLAGS-ISG-SGKLVTQIR--- 381 (466)
Q Consensus 318 I~ela~~~gillIvD~t~a~~~~~~p----------l~~gaD-ivv~S~sK~lgG~gdv~gG~-vvg-~~eli~~l~--- 381 (466)
|.++.++.+.+-+.|-+|..+...+. .+.|.+ ++..|+.|-+|-.|...|.+ |++ +.+...++.
T Consensus 223 i~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQl 302 (427)
T KOG1411|consen 223 ISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQL 302 (427)
T ss_pred HHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHH
Confidence 99999999999999999754432111 123444 67899999999877654433 233 444444443
Q ss_pred -HHHHHhCCCchHHHHHHH----------HHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 382 -NLHHVLGGALNPNAAYLI----------IRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 382 -~~~~~~G~~ls~~~A~l~----------lrgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+.+.+-++.+-..|.++ ..-+..+....+++...++.|.+.|+..
T Consensus 303 k~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~ 359 (427)
T KOG1411|consen 303 KILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKE 359 (427)
T ss_pred HHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcC
Confidence 333222222111111111 1123334444556666677788877764
No 391
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.48 E-value=0.0077 Score=55.08 Aligned_cols=54 Identities=13% Similarity=0.335 Sum_probs=40.5
Q ss_pred CchhHHHHHHHHHhhhC--C---CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccc
Q 012321 208 GNPTTVVVEEKMSALEG--A---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRK 261 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g--~---e~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~ 261 (466)
....++++.+.+.+..| . .+.|++++| ++|+..++.+++.+||.|++++|.|++
T Consensus 94 ~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 94 LANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 34556777777777666 2 234555555 599999999999999999999999974
No 392
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=95.83 E-value=0.21 Score=51.44 Aligned_cols=206 Identities=12% Similarity=0.084 Sum_probs=112.1
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCH-HHHHHHHHHHhccCCCE--EEEcCCCccch-HHHHHhhcccCCc-EEEEe-
Q 012321 210 PTTVVVEEKMSALEGAE---STVIMASG-MSASTVMLLALVPAGGH--IVTTTDCYRKT-RIFIETVLPKMGI-TATVI- 280 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~~~SG-~aAi~~al~all~pGD~--VLv~~~~y~~t-~~~~~~~l~~~gi-~v~~v- 280 (466)
......++.+.++++.+ +.+++.+| +....++.+.++..+.. |.+ -.|... ......+.....+ .....
T Consensus 50 ~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~--g~Ws~~a~~eA~~~~~~~~~~~~~~~~ 127 (365)
T COG1932 50 NVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDT--GAWSEFAIKEAKKVGKQPKLIDARIEE 127 (365)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEee--eehhHhHHHHHHHhcccccccccceec
Confidence 34566788888899863 35555444 47788888888865542 333 223221 1111111111111 11100
Q ss_pred ----CCCCHHHHHHhccCCCceEEEEeCCCCCCccccc-HHHHHHHHHhcCCEEEEeCCCCCCCccchhcc-CCcEEEec
Q 012321 281 ----DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFATPLNQKALSL-GADLVLHS 354 (466)
Q Consensus 281 ----d~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d-l~~I~ela~~~gillIvD~t~a~~~~~~pl~~-gaDivv~S 354 (466)
...+++.+. +.++ ...|+++.=..-+|.-++ ...+. .+.++|+|.+-. .+.++++. ..|++..+
T Consensus 128 ~~~~~iP~~~~~~--~~~~-~ayv~~~~NeTi~Gv~v~~~p~~~-----~~~~~v~D~SS~--ilsr~iDvsk~dviyag 197 (365)
T COG1932 128 AGYGSIPDLSKWD--FSDN-DAYVHFCWNETISGVEVPELPDIG-----SDGLLVADASSA--ILSRPIDVSKYDVIYAG 197 (365)
T ss_pred cCccCCCChhhcc--cCCC-ccEEEEecCCcccceEccCCCCCC-----CCceEEEecccH--HhcCCCChhHcceEEEe
Confidence 112333332 3332 344555322223465443 22211 127899998743 22233332 46899999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHH-H-H--------HhC---CCchHHHHHHHHHhhHHH------HHHHHHHHH
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNL-H-H--------VLG---GALNPNAAYLIIRGMKTL------HLRVQQQNS 415 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~-~-~--------~~G---~~ls~~~A~l~lrgL~tl------~~R~e~~~~ 415 (466)
..|-+|+.| .++++.++++++++... . . .-| .+++.+.-|+....++++ +...++-.+
T Consensus 198 aQKnlGpaG---ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ 274 (365)
T COG1932 198 AQKNLGPAG---LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQA 274 (365)
T ss_pred hhhccCccc---eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999887 48889999998887653 1 1 011 233444444444455554 344566778
Q ss_pred HHHHHHHHHHcCCCc
Q 012321 416 TALRMAKILEAHPKV 430 (466)
Q Consensus 416 na~~La~~L~~~p~V 430 (466)
+++.|.+++.+.+..
T Consensus 275 ka~~LY~~id~s~fy 289 (365)
T COG1932 275 KAQLLYDWIDKSDFY 289 (365)
T ss_pred HHHHHHHHHHhCCcc
Confidence 999999999998653
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=94.97 E-value=0.11 Score=51.48 Aligned_cols=99 Identities=16% Similarity=0.264 Sum_probs=64.4
Q ss_pred CHHHHHHhccCCCce-EEEEeCCCC-CCcccc-cHHHHHHHHHhcCCEEEEeCCCCCCCc------cchhccC-CcEEEe
Q 012321 284 DMEGLEAALNNNNVS-LFFTESPTN-PFLRCV-DVKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG-ADLVLH 353 (466)
Q Consensus 284 D~e~Le~ai~~~~tk-lV~lesPsN-PtG~v~-dl~~I~ela~~~gillIvD~t~a~~~~------~~pl~~g-aDivv~ 353 (466)
|++.+++.+++.... ++.+.+.++ -.-+.. .+++|+.+|..|+++-+|.|+|+.... ....+.| +|.++.
T Consensus 142 dleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vq 221 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQ 221 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHH
Confidence 788888888764333 333322221 122333 489999999999999999999875321 1112233 588999
Q ss_pred ccccccccccCceEEEEEe--ChHHHHHHHHHHH
Q 012321 354 SATKFIGGHNDVLAGSISG--SGKLVTQIRNLHH 385 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg--~~eli~~l~~~~~ 385 (466)
|+-|-|--+ .||.++. ++..++.+.+...
T Consensus 222 sldknf~vp---vggaiia~fk~n~iq~iak~yp 252 (432)
T KOG3843|consen 222 SLDKNFMVP---VGGAIIAAFKDNFIQEIAKMYP 252 (432)
T ss_pred Hhhhcceee---cchhHhhHhHHHHHHHHHHhCC
Confidence 999999877 4777765 4567777665443
No 394
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=90.77 E-value=1.2 Score=45.95 Aligned_cols=74 Identities=16% Similarity=0.146 Sum_probs=50.0
Q ss_pred HHHHHHhccC-----CCceEEEEeCCCCCCcccc---c-HHHHHHHHHhcCCEEEEeCCCCC----CCc--cc--hhccC
Q 012321 285 MEGLEAALNN-----NNVSLFFTESPTNPFLRCV---D-VKLVSDLCHKKGAIVCIDGTFAT----PLN--QK--ALSLG 347 (466)
Q Consensus 285 ~e~Le~ai~~-----~~tklV~lesPsNPtG~v~---d-l~~I~ela~~~gillIvD~t~a~----~~~--~~--pl~~g 347 (466)
++++|+.|.+ ..+.+|++|......|.-. | ++.|.+++++||+.+||||++.. +-+ .. .+...
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 5566666643 1378999998887777653 2 78999999999999999999632 211 11 23334
Q ss_pred CcEEEeccccccc
Q 012321 348 ADLVLHSATKFIG 360 (466)
Q Consensus 348 aDivv~S~sK~lg 360 (466)
.|+|. |||-|-
T Consensus 335 pD~vT--FSKK~q 345 (484)
T KOG1405|consen 335 PDVVT--FSKKFQ 345 (484)
T ss_pred cccee--hhhhhh
Confidence 67776 456554
No 395
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=87.34 E-value=1.6 Score=37.31 Aligned_cols=89 Identities=18% Similarity=0.238 Sum_probs=61.0
Q ss_pred HHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCC
Q 012321 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPL 339 (466)
Q Consensus 263 ~~~~~~~l~~~gi~v~~vd~~-D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~--gillIvD~t~a~~~ 339 (466)
...+...+++.|.++.++|.. +.+++.+.+.+.++++|.+.... +.......++++..|+. ++.+++=+.+.+..
T Consensus 17 l~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~t~~ 94 (121)
T PF02310_consen 17 LLYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHATAD 94 (121)
T ss_dssp HHHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSSGHH
T ss_pred HHHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCchhcC
Confidence 344556678889999988754 46888777765568899885543 34445567888888776 78999988776554
Q ss_pred ccchhc--cCCcEEEe
Q 012321 340 NQKALS--LGADLVLH 353 (466)
Q Consensus 340 ~~~pl~--~gaDivv~ 353 (466)
....+. .++|.++.
T Consensus 95 ~~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 95 PEEILREYPGIDYVVR 110 (121)
T ss_dssp HHHHHHHHHTSEEEEE
T ss_pred hHHHhccCcCcceecC
Confidence 444443 57887664
No 396
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=82.28 E-value=8.4 Score=32.95 Aligned_cols=91 Identities=13% Similarity=0.076 Sum_probs=57.7
Q ss_pred HHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc---CCEEEEeCCCCCC
Q 012321 263 RIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGTFATP 338 (466)
Q Consensus 263 ~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~---gillIvD~t~a~~ 338 (466)
..++...++..|.++.+... ..++++.+.+.+.++++|.++.-. +....++.++.+.+++. ++.+++=......
T Consensus 16 ~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~ 93 (119)
T cd02067 16 KNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTR 93 (119)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECCCCCh
Confidence 34555677888999877653 356777777766568899885442 23345677888888775 4666665554333
Q ss_pred CccchhccCCcEEEecc
Q 012321 339 LNQKALSLGADLVLHSA 355 (466)
Q Consensus 339 ~~~~pl~~gaDivv~S~ 355 (466)
........|+|.++...
T Consensus 94 ~~~~~~~~G~D~~~~~~ 110 (119)
T cd02067 94 DFKFLKEIGVDAYFGPA 110 (119)
T ss_pred hHHHHHHcCCeEEECCH
Confidence 22334456888777643
No 397
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=79.99 E-value=21 Score=37.18 Aligned_cols=43 Identities=14% Similarity=0.111 Sum_probs=32.7
Q ss_pred ceEEEEeC-----CCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC
Q 012321 297 VSLFFTES-----PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 297 tklV~les-----PsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~ 339 (466)
.++++++. -+..+-...|+..|..+-+..+.++|+|-+++++.
T Consensus 237 ~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 237 PNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 56777766 32233466799999998777799999999998764
No 398
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=79.98 E-value=6.2 Score=37.58 Aligned_cols=92 Identities=23% Similarity=0.222 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHhccCCCEEEE-cCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 233 SGMSASTVMLLALVPAGGHIVT-TTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv-~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+|..+- .++.+|++.+-+|.+ .++. ..... ..++..|+++...|..|.+.|.++++. ...|++..+.+....
T Consensus 7 tG~~G~-~v~~~L~~~~~~V~~l~R~~---~~~~~-~~l~~~g~~vv~~d~~~~~~l~~al~g--~d~v~~~~~~~~~~~ 79 (233)
T PF05368_consen 7 TGNQGR-SVVRALLSAGFSVRALVRDP---SSDRA-QQLQALGAEVVEADYDDPESLVAALKG--VDAVFSVTPPSHPSE 79 (233)
T ss_dssp TSHHHH-HHHHHHHHTTGCEEEEESSS---HHHHH-HHHHHTTTEEEES-TT-HHHHHHHHTT--CSEEEEESSCSCCCH
T ss_pred ccHHHH-HHHHHHHhCCCCcEEEEecc---chhhh-hhhhcccceEeecccCCHHHHHHHHcC--CceEEeecCcchhhh
Confidence 455332 334455556655443 3333 11112 234556899888898999999999985 566777677654333
Q ss_pred cccHHHHHHHHHhcCCEEEE
Q 012321 312 CVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIv 331 (466)
..-...|++.|++.|+-.++
T Consensus 80 ~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 80 LEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHHHHHHHT-SEEE
T ss_pred hhhhhhHHHhhhccccceEE
Confidence 33456789999998876555
No 399
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=76.76 E-value=72 Score=33.08 Aligned_cols=178 Identities=13% Similarity=0.062 Sum_probs=91.1
Q ss_pred ccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhC-CCcEEEeCCHH-HHHHHHHHHhccC--
Q 012321 173 ITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEG-AESTVIMASGM-SASTVMLLALVPA-- 248 (466)
Q Consensus 173 v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g-~e~~v~~~SG~-aAi~~al~all~p-- 248 (466)
...||..+.-=+.-+.+ +...+.....-+...|+-+ .++..+.+.+... ....+.++.|+ ..-.--+..|+..
T Consensus 44 ~~iPii~AnMdtv~~~~-mA~~la~~g~~~~iHk~~~--~e~~~~~v~~~~~~~~~~~~vsvG~~~~d~er~~~L~~a~~ 120 (343)
T TIGR01305 44 SGVPIIAANMDTVGTFE-MAAALSQHSIFTAIHKHYS--VDEWKAFATNSSPDCLQNVAVSSGSSDNDLEKMTSILEAVP 120 (343)
T ss_pred eCCceEecCCCcccCHH-HHHHHHHCCCeEEEeeCCC--HHHHHHHHHhhcccccceEEEEeccCHHHHHHHHHHHhcCC
Confidence 45677655443333333 3333332222233444222 2333333322111 12344446666 3333444556554
Q ss_pred CCEEEEcCCCccchHHHHHh---hcccC-CcEEEEeCCCCHHHHHHhccCCCceEEEEe-CC-CCCCcccc------c--
Q 012321 249 GGHIVTTTDCYRKTRIFIET---VLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SP-TNPFLRCV------D-- 314 (466)
Q Consensus 249 GD~VLv~~~~y~~t~~~~~~---~l~~~-gi~v~~vd~~D~e~Le~ai~~~~tklV~le-sP-sNPtG~v~------d-- 314 (466)
+-.+|+-+..|+-...+++. +-+.+ +..+.--+..+.|..+++++.. ...|.+. -| +|=+++.. .
T Consensus 121 ~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~viaGNV~T~e~a~~Li~aG-AD~ikVgiGpGSicttR~~~Gvg~pqlt 199 (343)
T TIGR01305 121 QLKFICLDVANGYSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILSG-ADIVKVGIGPGSVCTTRTKTGVGYPQLS 199 (343)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEEEecccCHHHHHHHHHcC-CCEEEEcccCCCcccCceeCCCCcCHHH
Confidence 34566667777765544432 22223 3444333456788888888753 6677653 12 12233322 2
Q ss_pred -HHHHHHHHHhcCCEEEEeCCCCC-CCccchhccCCcEEEec
Q 012321 315 -VKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHS 354 (466)
Q Consensus 315 -l~~I~ela~~~gillIvD~t~a~-~~~~~pl~~gaDivv~S 354 (466)
+.++++.++++++.+|.|.-.-. +-..+.+..|+|.|+..
T Consensus 200 Av~~~a~aa~~~~v~VIaDGGIr~~gDI~KALA~GAd~VMlG 241 (343)
T TIGR01305 200 AVIECADAAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLG 241 (343)
T ss_pred HHHHHHHHhccCCCeEEEcCCcCchhHHHHHHHcCCCEEEEC
Confidence 44555666677899999986433 34467788899988754
No 400
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=71.43 E-value=18 Score=31.30 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=50.9
Q ss_pred HhhcccCCcEEEEeCCCCHHHHHHhccC-CCceEEEEeCCCCCCcccccHHHHHHHHHhcC--CEEEEeCCCCCCCccc-
Q 012321 267 ETVLPKMGITATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQK- 342 (466)
Q Consensus 267 ~~~l~~~gi~v~~vd~~D~e~Le~ai~~-~~tklV~lesPsNPtG~v~dl~~I~ela~~~g--illIvD~t~a~~~~~~- 342 (466)
...+++.|+.+...+....++..+.+.. .++++|.+.. .+.......++++..|+.+ +++++=..+.+.....
T Consensus 9 aa~l~~~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~---~~~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t~~p~~~ 85 (127)
T cd02068 9 AAVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISL---MTSAIYEALELAKIAKEVLPNVIVVVGGPHATFFPEEI 85 (127)
T ss_pred HHHHHHCCCeeeecCCCCHHHHHHHHHHhcCCCEEEEee---ccccHHHHHHHHHHHHHHCCCCEEEECCcchhhCHHHH
Confidence 3445666777777776666665555543 3478888853 2333346778888888865 8888877766544333
Q ss_pred hhccCCcEEE
Q 012321 343 ALSLGADLVL 352 (466)
Q Consensus 343 pl~~gaDivv 352 (466)
....++|+++
T Consensus 86 ~~~~~~D~vv 95 (127)
T cd02068 86 LEEPGVDFVV 95 (127)
T ss_pred hcCCCCCEEE
Confidence 1223456554
No 401
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=70.46 E-value=17 Score=39.39 Aligned_cols=85 Identities=18% Similarity=0.174 Sum_probs=57.8
Q ss_pred HHhhcccCC-cEEEEeCC----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCC
Q 012321 266 IETVLPKMG-ITATVIDP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATP 338 (466)
Q Consensus 266 ~~~~l~~~g-i~v~~vd~----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~--gillIvD~t~a~~ 338 (466)
+...++..| .++.++|. .+.+++.+.+.+.++++|.++.. |.......++++.+|+. ++.+|+=+.+++.
T Consensus 28 lAa~L~~~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~ 104 (497)
T TIGR02026 28 IGGALLDAGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPTF 104 (497)
T ss_pred HHHHHHhcCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcCc
Confidence 334466678 57888873 35677777776556888888432 34445567888888886 8999998888776
Q ss_pred Cccchhc--cCCcEEEe
Q 012321 339 LNQKALS--LGADLVLH 353 (466)
Q Consensus 339 ~~~~pl~--~gaDivv~ 353 (466)
.....+. .++|+++.
T Consensus 105 ~~~~~l~~~p~vD~Vv~ 121 (497)
T TIGR02026 105 MFHQVLTEAPWIDFIVR 121 (497)
T ss_pred CHHHHHhcCCCccEEEe
Confidence 5554443 25787765
No 402
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=68.50 E-value=18 Score=34.65 Aligned_cols=125 Identities=16% Similarity=0.143 Sum_probs=71.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH--HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc--EEEEeCCC
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPA 283 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~--aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi--~v~~vd~~ 283 (466)
..|....+-..+++..++..++=+++++ +++.++ ..++++.+|++.+..- .........+++.|. .++++...
T Consensus 29 i~~~~g~lL~~l~~~~~~k~vLEIGt~~GySal~la--~~l~~~g~i~tiE~~~-~~~~~A~~~~~~ag~~~~I~~~~gd 105 (205)
T PF01596_consen 29 ISPETGQLLQMLVRLTRPKRVLEIGTFTGYSALWLA--EALPEDGKITTIEIDP-ERAEIARENFRKAGLDDRIEVIEGD 105 (205)
T ss_dssp HHHHHHHHHHHHHHHHT-SEEEEESTTTSHHHHHHH--HTSTTTSEEEEEESSH-HHHHHHHHHHHHTTGGGGEEEEES-
T ss_pred cCHHHHHHHHHHHHhcCCceEEEeccccccHHHHHH--HhhcccceEEEecCcH-HHHHHHHHHHHhcCCCCcEEEEEec
Confidence 4566777788888889988888777665 555433 2355666877766432 223334444454443 34444333
Q ss_pred CHHHHHHhccCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC
Q 012321 284 DMEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 284 D~e~Le~ai~~~---~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~ 338 (466)
-.+.|.+...+. +..+||+...- ......++.+.++.+ .|.++|+||+...+
T Consensus 106 a~~~l~~l~~~~~~~~fD~VFiDa~K--~~y~~y~~~~~~ll~-~ggvii~DN~l~~G 160 (205)
T PF01596_consen 106 ALEVLPELANDGEEGQFDFVFIDADK--RNYLEYFEKALPLLR-PGGVIIADNVLWRG 160 (205)
T ss_dssp HHHHHHHHHHTTTTTSEEEEEEESTG--GGHHHHHHHHHHHEE-EEEEEEEETTTGGG
T ss_pred cHhhHHHHHhccCCCceeEEEEcccc--cchhhHHHHHhhhcc-CCeEEEEccccccc
Confidence 344455444322 36899997643 222223555555543 57889999996543
No 403
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=68.00 E-value=1.5e+02 Score=30.78 Aligned_cols=124 Identities=15% Similarity=0.103 Sum_probs=71.8
Q ss_pred EEEeCCHH-HHHHHHHHHhcc--CCCEEEEcCCCccchHHHHH---hhcccC-CcEEEEeCCCCHHHHHHhccCCCceEE
Q 012321 228 TVIMASGM-SASTVMLLALVP--AGGHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLF 300 (466)
Q Consensus 228 ~v~~~SG~-aAi~~al~all~--pGD~VLv~~~~y~~t~~~~~---~~l~~~-gi~v~~vd~~D~e~Le~ai~~~~tklV 300 (466)
.+.++.|+ ..-.--+..++. +|-.+|+-+..|+-...+++ .+-+.+ .+.+.--+..+.|..+++++.. ...|
T Consensus 98 ~~~vavG~~~~d~er~~~L~~~~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vIaGNV~T~e~a~~Li~aG-AD~v 176 (346)
T PRK05096 98 HVMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELILSG-ADIV 176 (346)
T ss_pred eEEEEecCCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHcC-CCEE
Confidence 34446665 333333445554 56556666777876554443 222223 3444433455778888877653 4444
Q ss_pred E-------EeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCC-CCCccchhccCCcEEE
Q 012321 301 F-------TESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVL 352 (466)
Q Consensus 301 ~-------lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a-~~~~~~pl~~gaDivv 352 (466)
- +|+.--.+|.=.+ +.+.++.++++|+.+|.|.-.- .+-..+.+..|+|.|+
T Consensus 177 KVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi~~sGDI~KAlaaGAd~VM 240 (346)
T PRK05096 177 KVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFGGGADFVM 240 (346)
T ss_pred EEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCcccccHHHHHHHcCCCEEE
Confidence 3 2333333444333 5677778889999999998643 3445677788999776
No 404
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=67.90 E-value=21 Score=35.50 Aligned_cols=114 Identities=23% Similarity=0.272 Sum_probs=64.3
Q ss_pred HHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccch----HHHHHhhcccCCcEEEEeCCCCHH
Q 012321 212 TVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKT----RIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 212 ~~~Lee~lA~l~g~-e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t----~~~~~~~l~~~gi~v~~vd~~D~e 286 (466)
.+.|++....+-+. .-.|.|++|.....++..+.-.-||+|+..+-..+-. ..-....++..|++..+++..-.
T Consensus 4 ~~Kl~~l~~~ik~~~kv~vAfSGGvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~~- 82 (269)
T COG1606 4 LSKLERLKKAIKEKKKVVVAFSGGVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNRM- 82 (269)
T ss_pred HHHHHHHHHHHhhcCeEEEEecCCccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhhc-
Confidence 34444444444333 4566778887544444444444567766543332221 22223446677888777654211
Q ss_pred HHHHhccCCCceEEEEeCCCCCCccccc--HHHHHHHHHhcCCEEEEeCCCCC
Q 012321 287 GLEAALNNNNVSLFFTESPTNPFLRCVD--VKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPtG~v~d--l~~I~ela~~~gillIvD~t~a~ 337 (466)
+++ +..+|.|+.-.|-. .+.|.+.++++|.-+|+|.|-++
T Consensus 83 ------~~~-----~~~n~~~rCY~CK~~v~~~l~~~a~~~Gyd~V~dGtNas 124 (269)
T COG1606 83 ------DPE-----FKENPENRCYLCKRAVYSTLVEEAEKRGYDVVADGTNAS 124 (269)
T ss_pred ------chh-----hccCCCCcchHHHHHHHHHHHHHHHHcCCCEEEeCCcHH
Confidence 111 23355555544432 57899999999999999999543
No 405
>PLN02476 O-methyltransferase
Probab=64.83 E-value=43 Score=33.68 Aligned_cols=124 Identities=15% Similarity=0.225 Sum_probs=69.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH--HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE--EEEeCCC
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPA 283 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~--aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~--v~~vd~~ 283 (466)
..|....+-..+.++.++..++=+++++ .++.++. .+.++.+|+..+..- .........+++.|+. ++.+...
T Consensus 102 v~~~~g~lL~~L~~~~~ak~VLEIGT~tGySal~lA~--al~~~G~V~TiE~d~-e~~~~Ar~n~~~aGl~~~I~li~Gd 178 (278)
T PLN02476 102 VSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAVAL--VLPESGCLVACERDS-NSLEVAKRYYELAGVSHKVNVKHGL 178 (278)
T ss_pred cCHHHHHHHHHHHHhcCCCeEEEecCCCCHHHHHHHH--hCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 4677888899999999887766555544 5554432 345566766544332 2233444445556653 4433333
Q ss_pred CHHHHHHhcc---CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCC
Q 012321 284 DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 284 D~e~Le~ai~---~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~ 337 (466)
-.+.|.+... ..+..+||+..+- .....-++.+.++.+ .|.++++||+...
T Consensus 179 A~e~L~~l~~~~~~~~FD~VFIDa~K--~~Y~~y~e~~l~lL~-~GGvIV~DNvL~~ 232 (278)
T PLN02476 179 AAESLKSMIQNGEGSSYDFAFVDADK--RMYQDYFELLLQLVR-VGGVIVMDNVLWH 232 (278)
T ss_pred HHHHHHHHHhcccCCCCCEEEECCCH--HHHHHHHHHHHHhcC-CCcEEEEecCccC
Confidence 2344444331 1236899997653 122223455555554 4777899998543
No 406
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=63.76 E-value=92 Score=30.90 Aligned_cols=43 Identities=14% Similarity=0.120 Sum_probs=30.8
Q ss_pred ceEEEEeCC----CCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC
Q 012321 297 VSLFFTESP----TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 297 tklV~lesP----sNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~ 339 (466)
.++++++.- .+++-...|+..|..+.+..+.++++|-++..+.
T Consensus 151 ~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 151 SNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 467777511 1233336799999888887999999999987653
No 407
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=62.35 E-value=74 Score=33.23 Aligned_cols=89 Identities=20% Similarity=0.182 Sum_probs=51.3
Q ss_pred CCcEEEEeCC--CCHHHHHHhcc----CCCceEEEEe-CCC-CC--CcccccHHHHHHHHHhcCCEEEEeCCCCCC---C
Q 012321 273 MGITATVIDP--ADMEGLEAALN----NNNVSLFFTE-SPT-NP--FLRCVDVKLVSDLCHKKGAIVCIDGTFATP---L 339 (466)
Q Consensus 273 ~gi~v~~vd~--~D~e~Le~ai~----~~~tklV~le-sPs-NP--tG~v~dl~~I~ela~~~gillIvD~t~a~~---~ 339 (466)
.|..+..-.. .++++++.+++ ..+.++++++ ..+ .| +-...|+..|..+-+.+++++++|-++..+ +
T Consensus 224 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G~r~~ 303 (360)
T PRK12595 224 VNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTGRRDL 303 (360)
T ss_pred cCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCcchhh
Confidence 3444443322 35666655442 2234677775 222 23 233369999998888899999999998766 2
Q ss_pred c----cchhccCCc-EEEec-ccccccc
Q 012321 340 N----QKALSLGAD-LVLHS-ATKFIGG 361 (466)
Q Consensus 340 ~----~~pl~~gaD-ivv~S-~sK~lgG 361 (466)
. .-....|+| +++.. +.|-..|
T Consensus 304 ~~~~a~aAva~GAdg~~iE~H~dp~~a~ 331 (360)
T PRK12595 304 LLPTAKAALAIGADGVMAEVHPDPAVAL 331 (360)
T ss_pred HHHHHHHHHHcCCCeEEEEecCCCCCCC
Confidence 1 223567887 44432 2444443
No 408
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=61.71 E-value=1e+02 Score=28.53 Aligned_cols=105 Identities=13% Similarity=0.181 Sum_probs=55.2
Q ss_pred CcEEEeC-CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeC
Q 012321 226 ESTVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTES 304 (466)
Q Consensus 226 e~~v~~~-SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~les 304 (466)
...++++ +|..+- .+...+...|.+|.+..........+...+....+..+...+..+.+++.+.+.+ ..+|+..+
T Consensus 29 ~~vlVlGgtG~iG~-~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~diVi~at 105 (194)
T cd01078 29 KTAVVLGGTGPVGQ-RAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG--ADVVFAAG 105 (194)
T ss_pred CEEEEECCCCHHHH-HHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc--CCEEEECC
Confidence 3466665 466443 3334455667677665433222222222222234566666677788888888864 56777755
Q ss_pred CCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC
Q 012321 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 305 PsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~ 339 (466)
|. |.... .+.+... ....+++|-.+....
T Consensus 106 ~~---g~~~~--~~~~~~~-~~~~vv~D~~~~~~~ 134 (194)
T cd01078 106 AA---GVELL--EKLAWAP-KPLAVAADVNAVPPV 134 (194)
T ss_pred CC---Cceec--hhhhccc-CceeEEEEccCCCCC
Confidence 54 33211 1111111 224689998876544
No 409
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=61.62 E-value=37 Score=35.51 Aligned_cols=84 Identities=17% Similarity=0.073 Sum_probs=57.5
Q ss_pred HHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc-----cHHHHHHHHHhcCCEEEEeCCCCCCC-
Q 012321 266 IETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATPL- 339 (466)
Q Consensus 266 ~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~-----dl~~I~ela~~~gillIvD~t~a~~~- 339 (466)
++.+.+.++..+..-+..+.++.+.+++-. .+.|++.+ --|+-. +++.|.++.+..++.|++|.-.-.+.
T Consensus 228 i~~ir~~~~~pviiKgV~~~eda~~a~~~G-~d~I~VSn---hGGrqld~~~~~~~~L~ei~~~~~~~vi~dGGIr~g~D 303 (361)
T cd04736 228 LRWLRDLWPHKLLVKGIVTAEDAKRCIELG-ADGVILSN---HGGRQLDDAIAPIEALAEIVAATYKPVLIDSGIRRGSD 303 (361)
T ss_pred HHHHHHhCCCCEEEecCCCHHHHHHHHHCC-cCEEEECC---CCcCCCcCCccHHHHHHHHHHHhCCeEEEeCCCCCHHH
Confidence 444444455555544567888888888764 88998844 334443 48889998888889999998755443
Q ss_pred ccchhccCCcEEEe
Q 012321 340 NQKALSLGADLVLH 353 (466)
Q Consensus 340 ~~~pl~~gaDivv~ 353 (466)
..+.+.+|+|.|..
T Consensus 304 v~KALaLGA~aV~i 317 (361)
T cd04736 304 IVKALALGANAVLL 317 (361)
T ss_pred HHHHHHcCCCEEEE
Confidence 35667788887753
No 410
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=61.31 E-value=86 Score=30.93 Aligned_cols=124 Identities=15% Similarity=0.153 Sum_probs=70.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHH--HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc--EEEEeCCCC
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPAD 284 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~--aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi--~v~~vd~~D 284 (466)
.|....|-..+.+..++..++=+++++ +++.++ ..+.++.+|++.+.. ..........+++.|+ .++++...-
T Consensus 64 ~~~~g~lL~~l~~~~~ak~iLEiGT~~GySal~la--~al~~~g~v~tiE~~-~~~~~~Ar~~~~~ag~~~~I~~~~G~a 140 (247)
T PLN02589 64 SADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATA--LALPEDGKILAMDIN-RENYELGLPVIQKAGVAHKIDFREGPA 140 (247)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEEeChhhHHHHHHH--hhCCCCCEEEEEeCC-HHHHHHHHHHHHHCCCCCceEEEeccH
Confidence 567778888888888888777666555 555333 224566677776653 2223333334444453 233333333
Q ss_pred HHHHHHhccC----CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC
Q 012321 285 MEGLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 285 ~e~Le~ai~~----~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~ 338 (466)
.+.|.+.... .+..+||+..- .......++.+.++.+ .|.++|+||+.-.+
T Consensus 141 ~e~L~~l~~~~~~~~~fD~iFiDad--K~~Y~~y~~~~l~ll~-~GGviv~DNvl~~G 195 (247)
T PLN02589 141 LPVLDQMIEDGKYHGTFDFIFVDAD--KDNYINYHKRLIDLVK-VGGVIGYDNTLWNG 195 (247)
T ss_pred HHHHHHHHhccccCCcccEEEecCC--HHHhHHHHHHHHHhcC-CCeEEEEcCCCCCC
Confidence 4444443321 24789999543 3333444566666554 47779999995443
No 411
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=59.67 E-value=52 Score=34.01 Aligned_cols=131 Identities=18% Similarity=0.240 Sum_probs=81.1
Q ss_pred HHHHHHHHHhccCCCEEEEc-CCCccc-hHHHHHhhcccCCcEEEEe-CCCCH-----HHHHHhccCCCceEEEEeCCC-
Q 012321 236 SASTVMLLALVPAGGHIVTT-TDCYRK-TRIFIETVLPKMGITATVI-DPADM-----EGLEAALNNNNVSLFFTESPT- 306 (466)
Q Consensus 236 aAi~~al~all~pGD~VLv~-~~~y~~-t~~~~~~~l~~~gi~v~~v-d~~D~-----e~Le~ai~~~~tklV~lesPs- 306 (466)
..|.-+..-+.+.|-.|++. ..+|.. ....++...++.|+++..- ...|+ ++++.+..++ ..+|++.+..
T Consensus 154 TTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~-~DvvliDTAGR 232 (340)
T COG0552 154 TTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARG-IDVVLIDTAGR 232 (340)
T ss_pred hHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcC-CCEEEEeCccc
Confidence 56666666677888776654 456644 3444555567788887652 24454 5667776664 8999998864
Q ss_pred --CCCcccccHHHHHHHHHhcC------CEEEEeCCCCCCCccch--h--ccCCcEEEeccccccccccCceEEEEEe
Q 012321 307 --NPFLRCVDVKLVSDLCHKKG------AIVCIDGTFATPLNQKA--L--SLGADLVLHSATKFIGGHNDVLAGSISG 372 (466)
Q Consensus 307 --NPtG~v~dl~~I~ela~~~g------illIvD~t~a~~~~~~p--l--~~gaDivv~S~sK~lgG~gdv~gG~vvg 372 (466)
|-..-+.++++|.+++++.. +++++|.+.+.....+. + ..+.|-++ +||.=+. ..||+++.
T Consensus 233 Lhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiI--lTKlDgt---AKGG~il~ 305 (340)
T COG0552 233 LHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGII--LTKLDGT---AKGGIILS 305 (340)
T ss_pred ccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEE--EEecccC---CCcceeee
Confidence 44454557888888888754 77888999664333221 1 12344333 5675432 25788765
No 412
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=56.71 E-value=52 Score=28.39 Aligned_cols=93 Identities=14% Similarity=0.074 Sum_probs=55.6
Q ss_pred HHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc---CCEEEEeCCCCCC
Q 012321 263 RIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGTFATP 338 (466)
Q Consensus 263 ~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~---gillIvD~t~a~~ 338 (466)
..++...++..|.++.+... ..++++.+++.+.++.+|.++.... -....++++.+..++. ++.+++=.....-
T Consensus 16 ~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~--~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~ 93 (122)
T cd02071 16 AKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSG--GHMTLFPEVIELLRELGAGDILVVGGGIIPPE 93 (122)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccch--hhHHHHHHHHHHHHhcCCCCCEEEEECCCCHH
Confidence 34455667888999887754 3567776666555688999865542 2233567888877776 4566665432211
Q ss_pred CccchhccCCcEEEecccc
Q 012321 339 LNQKALSLGADLVLHSATK 357 (466)
Q Consensus 339 ~~~~pl~~gaDivv~S~sK 357 (466)
......+.|.|-+++.-++
T Consensus 94 ~~~~~~~~G~d~~~~~~~~ 112 (122)
T cd02071 94 DYELLKEMGVAEIFGPGTS 112 (122)
T ss_pred HHHHHHHCCCCEEECCCCC
Confidence 1122335677776655443
No 413
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=55.59 E-value=84 Score=31.32 Aligned_cols=89 Identities=12% Similarity=0.147 Sum_probs=45.7
Q ss_pred HHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEe-CC-CCHHHHHHhccCCCceEEEEeCCCCCCcccc----c
Q 012321 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI-DP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV----D 314 (466)
Q Consensus 242 l~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v-d~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~----d 314 (466)
+..+.+.| |-|++++-.+.....++ ..++..|+...++ .+ ...+.++...+.. ...||+-+-...||.-. +
T Consensus 112 ~~~~~~aGvdgviipDLP~ee~~~~~-~~~~~~gi~~I~lv~PtT~~eri~~i~~~a-~gFIY~vS~~GvTG~~~~~~~~ 189 (263)
T CHL00200 112 IKKISQAGVKGLIIPDLPYEESDYLI-SVCNLYNIELILLIAPTSSKSRIQKIARAA-PGCIYLVSTTGVTGLKTELDKK 189 (263)
T ss_pred HHHHHHcCCeEEEecCCCHHHHHHHH-HHHHHcCCCEEEEECCCCCHHHHHHHHHhC-CCcEEEEcCCCCCCCCccccHH
Confidence 33344445 66777776554433333 3456667665443 33 2345555544432 33666645444566532 3
Q ss_pred HHHHHHHHHhc-CCEEEEe
Q 012321 315 VKLVSDLCHKK-GAIVCID 332 (466)
Q Consensus 315 l~~I~ela~~~-gillIvD 332 (466)
++++.+..|++ +.++++|
T Consensus 190 ~~~~i~~ir~~t~~Pi~vG 208 (263)
T CHL00200 190 LKKLIETIKKMTNKPIILG 208 (263)
T ss_pred HHHHHHHHHHhcCCCEEEE
Confidence 45555555553 5666665
No 414
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=54.14 E-value=77 Score=28.48 Aligned_cols=84 Identities=17% Similarity=0.213 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
+|.-+- .++..+++.|-+|......-.... . ..++++...|..|++.+.+++.. ...|+...+.++. ..
T Consensus 7 tG~vG~-~l~~~L~~~~~~V~~~~R~~~~~~----~---~~~~~~~~~d~~d~~~~~~al~~--~d~vi~~~~~~~~-~~ 75 (183)
T PF13460_consen 7 TGFVGR-ALAKQLLRRGHEVTALVRSPSKAE----D---SPGVEIIQGDLFDPDSVKAALKG--ADAVIHAAGPPPK-DV 75 (183)
T ss_dssp TSHHHH-HHHHHHHHTTSEEEEEESSGGGHH----H---CTTEEEEESCTTCHHHHHHHHTT--SSEEEECCHSTTT-HH
T ss_pred CChHHH-HHHHHHHHCCCEEEEEecCchhcc----c---ccccccceeeehhhhhhhhhhhh--cchhhhhhhhhcc-cc
Confidence 354443 345667777766655433222111 1 56888888899999999999985 4566654433222 33
Q ss_pred ccHHHHHHHHHhcCC
Q 012321 313 VDVKLVSDLCHKKGA 327 (466)
Q Consensus 313 ~dl~~I~ela~~~gi 327 (466)
...+.+.+.+++.|+
T Consensus 76 ~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 76 DAAKNIIEAAKKAGV 90 (183)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred ccccccccccccccc
Confidence 346778888888775
No 415
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=53.73 E-value=1.5e+02 Score=28.93 Aligned_cols=70 Identities=20% Similarity=0.252 Sum_probs=39.6
Q ss_pred CCCCHHHHHHhccCCCceEEEEeCCCCCC--cccc-c-----HHHHHHHHHhcC--CEEEEeCCCCCCCccchhccCCcE
Q 012321 281 DPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV-D-----VKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADL 350 (466)
Q Consensus 281 d~~D~e~Le~ai~~~~tklV~lesPsNPt--G~v~-d-----l~~I~ela~~~g--illIvD~t~a~~~~~~pl~~gaDi 350 (466)
+.+.++.++..+.. +..|.+-+. ||- |.-. + ++++.++.+++| ..+-+|.-....-.....+.|+|+
T Consensus 127 P~Tp~~~i~~~l~~--vD~VLiMtV-~PGfgGQ~f~~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGaD~ 203 (228)
T PRK08091 127 PETPISLLEPYLDQ--IDLIQILTL-DPRTGTKAPSDLILDRVIQVENRLGNRRVEKLISIDGSMTLELASYLKQHQIDW 203 (228)
T ss_pred CCCCHHHHHHHHhh--cCEEEEEEE-CCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCCE
Confidence 45678888888864 454444333 342 3332 1 444555555554 778999753322223445679998
Q ss_pred EEe
Q 012321 351 VLH 353 (466)
Q Consensus 351 vv~ 353 (466)
++.
T Consensus 204 ~V~ 206 (228)
T PRK08091 204 VVS 206 (228)
T ss_pred EEE
Confidence 773
No 416
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=53.31 E-value=67 Score=27.29 Aligned_cols=84 Identities=13% Similarity=0.086 Sum_probs=48.1
Q ss_pred HHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC---CHHHHHHhccC-CCceEEEEeCCC--CCCccccc
Q 012321 241 MLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---DMEGLEAALNN-NNVSLFFTESPT--NPFLRCVD 314 (466)
Q Consensus 241 al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~---D~e~Le~ai~~-~~tklV~lesPs--NPtG~v~d 314 (466)
.+..+..-|=+|+.+. ++..++ +..|+++..+... .-.++.+.|.+ .++.+|+. .|+ +......|
T Consensus 17 ~a~~l~~~G~~i~AT~----gTa~~L----~~~Gi~~~~v~~~~~~g~~~i~~~i~~~g~idlVIn-~~~~~~~~~~~~d 87 (112)
T cd00532 17 LAPKLSSDGFPLFATG----GTSRVL----ADAGIPVRAVSKRHEDGEPTVDAAIAEKGKFDVVIN-LRDPRRDRCTDED 87 (112)
T ss_pred HHHHHHHCCCEEEECc----HHHHHH----HHcCCceEEEEecCCCCCcHHHHHHhCCCCEEEEEE-cCCCCcccccCCC
Confidence 3344445565555432 333333 3356766554321 12446666666 56887764 454 21124557
Q ss_pred HHHHHHHHHhcCCEEEEeC
Q 012321 315 VKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 315 l~~I~ela~~~gillIvD~ 333 (466)
-..|.+.|-+++++++.+-
T Consensus 88 g~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 88 GTALLRLARLYKIPVTTPN 106 (112)
T ss_pred hHHHHHHHHHcCCCEEECH
Confidence 8899999999999998763
No 417
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=53.06 E-value=2.7e+02 Score=28.50 Aligned_cols=175 Identities=18% Similarity=0.140 Sum_probs=85.2
Q ss_pred ccCCccccCCCccCChHHHHHHHhcccCCCc-cCCCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCC
Q 012321 173 ITTPVVNTSAYFFKKTAELIDFKEKRRASFE-YGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGG 250 (466)
Q Consensus 173 v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~-Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD 250 (466)
+..||+.+.-....+.+........ ++.. ..+. -..+++++.+.+.-+. -.+....|. .-....+..+++.|=
T Consensus 33 l~~Piv~apM~~vt~~~ma~ava~~--GglGvi~~~--~~~~~~~~~i~~vk~~-l~v~~~~~~~~~~~~~~~~l~eagv 107 (325)
T cd00381 33 LNIPLVSAPMDTVTESEMAIAMARL--GGIGVIHRN--MSIEEQAEEVRKVKGR-LLVGAAVGTREDDKERAEALVEAGV 107 (325)
T ss_pred cCCCEEecCCCcCCcHHHHHHHHHC--CCEEEEeCC--CCHHHHHHHHHHhccC-ceEEEecCCChhHHHHHHHHHhcCC
Confidence 5667877655544444444333222 2221 1222 1235666666555432 122222222 112233445666675
Q ss_pred EEEEcCCCccch---HHHHHhhcccCC-cEEEEeCCCCHHHHHHhccCCCceEEEEe-CCCC------CCccc-cc---H
Q 012321 251 HIVTTTDCYRKT---RIFIETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PFLRC-VD---V 315 (466)
Q Consensus 251 ~VLv~~~~y~~t---~~~~~~~l~~~g-i~v~~vd~~D~e~Le~ai~~~~tklV~le-sPsN------PtG~v-~d---l 315 (466)
.+|..+..++.. ...++.+-+... +.+..-...+.+..+++++.. ...|.+. .|.. .+|.- .+ +
T Consensus 108 ~~I~vd~~~G~~~~~~~~i~~ik~~~p~v~Vi~G~v~t~~~A~~l~~aG-aD~I~vg~g~G~~~~t~~~~g~g~p~~~~i 186 (325)
T cd00381 108 DVIVIDSAHGHSVYVIEMIKFIKKKYPNVDVIAGNVVTAEAARDLIDAG-ADGVKVGIGPGSICTTRIVTGVGVPQATAV 186 (325)
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHHCCCceEEECCCCCHHHHHHHHhcC-CCEEEECCCCCcCcccceeCCCCCCHHHHH
Confidence 555444444433 222322222222 454433556778777777653 6777662 1210 11111 22 3
Q ss_pred HHHHHHHHhcCCEEEEeCCCCCC-CccchhccCCcEEEe
Q 012321 316 KLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLH 353 (466)
Q Consensus 316 ~~I~ela~~~gillIvD~t~a~~-~~~~pl~~gaDivv~ 353 (466)
.++.+.++++++++|.|.=..++ -..+.+..|+|.|+.
T Consensus 187 ~~v~~~~~~~~vpVIA~GGI~~~~di~kAla~GA~~Vmi 225 (325)
T cd00381 187 ADVAAAARDYGVPVIADGGIRTSGDIVKALAAGADAVML 225 (325)
T ss_pred HHHHHHHhhcCCcEEecCCCCCHHHHHHHHHcCCCEEEe
Confidence 45666677789999998765543 235566788886653
No 418
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=52.42 E-value=76 Score=28.12 Aligned_cols=73 Identities=16% Similarity=0.069 Sum_probs=46.0
Q ss_pred CCccchHHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC---CEEEE
Q 012321 257 DCYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCI 331 (466)
Q Consensus 257 ~~y~~t~~~~~~~l~~~gi~v~~vd~~-D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~g---illIv 331 (466)
+.|.--..++...++..|+++...... .++++.++..+.+..+|.+++-. +.....++++.+..++.| +.+++
T Consensus 13 D~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~--~~~~~~~~~~~~~L~~~g~~~i~viv 89 (132)
T TIGR00640 13 DGHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKLGRPDILVVV 89 (132)
T ss_pred CccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCch--hhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 345444556666788889998776532 45665444444458899885544 334445788888888764 45555
No 419
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=51.74 E-value=2.3e+02 Score=27.37 Aligned_cols=126 Identities=14% Similarity=0.150 Sum_probs=64.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE--EEEeCCCCH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADM 285 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~--v~~vd~~D~ 285 (466)
..|....+-..++++.+...++=+++|+......+...+.++.+|+..+..- ......+..++..|+. ++++..+-.
T Consensus 52 v~~~~g~~L~~l~~~~~~~~vLEiGt~~G~s~l~la~~~~~~g~v~tiD~d~-~~~~~A~~n~~~~gl~~~i~~~~gda~ 130 (234)
T PLN02781 52 VPVDEGLFLSMLVKIMNAKNTLEIGVFTGYSLLTTALALPEDGRITAIDIDK-EAYEVGLEFIKKAGVDHKINFIQSDAL 130 (234)
T ss_pred cCHHHHHHHHHHHHHhCCCEEEEecCcccHHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEEccHH
Confidence 3456667777888888888777777665332223333344445776655432 2233333344444542 333322222
Q ss_pred HHHHHhcc---CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCC
Q 012321 286 EGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 286 e~Le~ai~---~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~ 337 (466)
+.+.+... ..+..+||+...-.+.- .-++.+.++.+ .|.++++||+...
T Consensus 131 ~~L~~l~~~~~~~~fD~VfiDa~k~~y~--~~~~~~~~ll~-~GG~ii~dn~l~~ 182 (234)
T PLN02781 131 SALDQLLNNDPKPEFDFAFVDADKPNYV--HFHEQLLKLVK-VGGIIAFDNTLWF 182 (234)
T ss_pred HHHHHHHhCCCCCCCCEEEECCCHHHHH--HHHHHHHHhcC-CCeEEEEEcCCcC
Confidence 33333321 12378999865421111 11344444443 4678999998543
No 420
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=51.73 E-value=91 Score=32.15 Aligned_cols=116 Identities=14% Similarity=0.092 Sum_probs=60.6
Q ss_pred HHHHHHHHHhhhCC----CcEEE-eCCHHHHHHHHHHHhccCCCEE--EEcCCCccch--HHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSALEGA----ESTVI-MASGMSASTVMLLALVPAGGHI--VTTTDCYRKT--RIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l~g~----e~~v~-~~SG~aAi~~al~all~pGD~V--Lv~~~~y~~t--~~~~~~~l~~~gi~v~~vd~ 282 (466)
.++|++.+.++-+. -++++ +++|-....++....-.-|.++ +..++.+..- ...++.+++.+|++...+..
T Consensus 42 ~~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~ 121 (343)
T TIGR03573 42 EKELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI 121 (343)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC
Confidence 34555555554321 23454 5566543333321111224443 3445555432 22455667778988776654
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCcccc--cHHHHHHHHHhcCCEEEEeCC
Q 012321 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCV--DVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 283 ~D~e~Le~ai~~~~tklV~lesPsNPtG~v~--dl~~I~ela~~~gillIvD~t 334 (466)
|.+.+....... .+ ...+|...+. -...+.++|+++|+.+|++..
T Consensus 122 -d~~~~~~l~~~~-~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~ 168 (343)
T TIGR03573 122 -NPETFRKLQRAY-FK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGE 168 (343)
T ss_pred -CHHHHHHHHHHH-Hh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCC
Confidence 445554433221 11 2334433332 256788999999999999876
No 421
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase. These enzymes adopt a TIM barrel structure. IMP dehydrogenase (1.1.1.205 from EC) (IMPDH) catalyzes the rate-limiting reaction of de novo GTP biosynthesis, the NAD-dependent reduction of IMP into XMP []. Inosine 5-phosphate + NAD+ + H2O = xanthosine 5-phosphate + NADH IMP dehydrogenase is associated with cell proliferation and is a possible target for cancer chemotherapy. Mammalian and bacterial IMPDHs are tetramers of identical chains. There are two IMP dehydrogenase isozymes in humans []. IMP dehydrogenase nearly always contains a long insertion that has two CBS domains within it. GMP reductase (1.7.1.7 from EC) catalyzes the irreversible and NADPH-dependent reductive deamination of GMP into IMP []. NADPH + guanosine 5-phosphate = NADP+ + inosine 5-phosphate + NH3 It converts nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and maintains intracellular balance of A and G nucleotides.; GO: 0003824 catalytic activity, 0055114 oxidation-reduction process; PDB: 3FFS_D 1VRD_A 1JCN_B 1EEP_B 3TSB_B 3USB_B 3TSD_A 4FF0_A 4FEZ_A 3KHJ_D ....
Probab=48.22 E-value=69 Score=33.41 Aligned_cols=110 Identities=20% Similarity=0.196 Sum_probs=62.1
Q ss_pred HHhccCCCEEEEcCCCccchHHHHH---hhcccCC-cEEEEeCCCCHHHHHHhccCCCceEEEEeC-CCCC------Ccc
Q 012321 243 LALVPAGGHIVTTTDCYRKTRIFIE---TVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTES-PTNP------FLR 311 (466)
Q Consensus 243 ~all~pGD~VLv~~~~y~~t~~~~~---~~l~~~g-i~v~~vd~~D~e~Le~ai~~~~tklV~les-PsNP------tG~ 311 (466)
..|+..|=.+|+-+-.++.+...++ .+-+.++ +.+.--+..+.+..+..++.. ...|-+-- |... +|.
T Consensus 114 ~~L~~agvD~ivID~a~g~s~~~~~~ik~ik~~~~~~~viaGNV~T~e~a~~L~~aG-ad~vkVGiGpGsiCtTr~v~Gv 192 (352)
T PF00478_consen 114 EALVEAGVDVIVIDSAHGHSEHVIDMIKKIKKKFPDVPVIAGNVVTYEGAKDLIDAG-ADAVKVGIGPGSICTTREVTGV 192 (352)
T ss_dssp HHHHHTT-SEEEEE-SSTTSHHHHHHHHHHHHHSTTSEEEEEEE-SHHHHHHHHHTT--SEEEESSSSSTTBHHHHHHSB
T ss_pred HHHHHcCCCEEEccccCccHHHHHHHHHHHHHhCCCceEEecccCCHHHHHHHHHcC-CCEEEEeccCCccccccccccc
Confidence 4456667556666666666444432 2333344 555444455788888877654 66776621 2111 222
Q ss_pred ccc----HHHHHHHHHhcCCEEEEeCCCC-CCCccchhccCCcEEEe
Q 012321 312 CVD----VKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLH 353 (466)
Q Consensus 312 v~d----l~~I~ela~~~gillIvD~t~a-~~~~~~pl~~gaDivv~ 353 (466)
=.+ +.+.++.++++++.+|.|.=.- .+-..+.+..|+|.|+-
T Consensus 193 G~PQ~tAv~~~a~~a~~~~v~iIADGGi~~sGDi~KAla~GAd~VMl 239 (352)
T PF00478_consen 193 GVPQLTAVYECAEAARDYGVPIIADGGIRTSGDIVKALAAGADAVML 239 (352)
T ss_dssp SCTHHHHHHHHHHHHHCTTSEEEEESS-SSHHHHHHHHHTT-SEEEE
T ss_pred CCcHHHHHHHHHHHhhhccCceeecCCcCcccceeeeeeecccceee
Confidence 122 5677778888999999998533 23446778889997763
No 422
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=47.58 E-value=1.7e+02 Score=27.12 Aligned_cols=108 Identities=17% Similarity=0.064 Sum_probs=56.8
Q ss_pred HHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEE--eCCCCHHHHHHhccCCCceEEEEeCCCCCCc---ccccHH
Q 012321 243 LALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPFL---RCVDVK 316 (466)
Q Consensus 243 ~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~--vd~~D~e~Le~ai~~~~tklV~lesPsNPtG---~v~dl~ 316 (466)
..+...| |.|++...........+-..+++.|+.+.. ....+++++.+++... ...|.+ .|....+ .....+
T Consensus 71 ~~~~~aGad~i~~h~~~~~~~~~~~i~~~~~~g~~~~v~~~~~~t~~e~~~~~~~~-~d~v~~-~~~~~~~~~~~~~~~~ 148 (202)
T cd04726 71 EMAFKAGADIVTVLGAAPLSTIKKAVKAAKKYGKEVQVDLIGVEDPEKRAKLLKLG-VDIVIL-HRGIDAQAAGGWWPED 148 (202)
T ss_pred HHHHhcCCCEEEEEeeCCHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHCC-CCEEEE-cCcccccccCCCCCHH
Confidence 3334444 666665433221112122344556777654 4566777776666533 566555 4432222 234467
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEE
Q 012321 317 LVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVL 352 (466)
Q Consensus 317 ~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv 352 (466)
.+.++.+..++++++|.-....-.....+.|+|.++
T Consensus 149 ~i~~~~~~~~~~i~~~GGI~~~~i~~~~~~Gad~vv 184 (202)
T cd04726 149 DLKKVKKLLGVKVAVAGGITPDTLPEFKKAGADIVI 184 (202)
T ss_pred HHHHHHhhcCCCEEEECCcCHHHHHHHHhcCCCEEE
Confidence 777777657788998864321111233456788655
No 423
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=47.20 E-value=1.7e+02 Score=24.62 Aligned_cols=22 Identities=14% Similarity=0.155 Sum_probs=16.3
Q ss_pred CcccccHHHHHHHHHhcCCEEE
Q 012321 309 FLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 309 tG~v~dl~~I~ela~~~gillI 330 (466)
.|...++-++.+.++++|+.++
T Consensus 70 ~g~~~~~~~~~~~a~~~g~~iv 91 (139)
T cd05013 70 SGETKETVEAAEIAKERGAKVI 91 (139)
T ss_pred CCCCHHHHHHHHHHHHcCCeEE
Confidence 3666678888899999986543
No 424
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed
Probab=46.77 E-value=78 Score=34.31 Aligned_cols=111 Identities=20% Similarity=0.191 Sum_probs=62.9
Q ss_pred HHHHhccCCCEEEEcCCCccchHHH---HHhhcccC-CcEEEEeCCCCHHHHHHhccCCCceEEEEe-CCC-CCCcc---
Q 012321 241 MLLALVPAGGHIVTTTDCYRKTRIF---IETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPT-NPFLR--- 311 (466)
Q Consensus 241 al~all~pGD~VLv~~~~y~~t~~~---~~~~l~~~-gi~v~~vd~~D~e~Le~ai~~~~tklV~le-sPs-NPtG~--- 311 (466)
.+..++..|-.+++.+..++....+ ++.+...+ ++.+..-+..+.++...+++-. .+.|-+. .|. +-+++
T Consensus 232 ~a~~L~~agvdvivvD~a~g~~~~vl~~i~~i~~~~p~~~vi~g~v~t~e~a~~l~~aG-ad~i~vg~g~gs~~~~r~~~ 310 (486)
T PRK05567 232 RAEALVEAGVDVLVVDTAHGHSEGVLDRVREIKAKYPDVQIIAGNVATAEAARALIEAG-ADAVKVGIGPGSICTTRIVA 310 (486)
T ss_pred HHHHHHHhCCCEEEEECCCCcchhHHHHHHHHHhhCCCCCEEEeccCCHHHHHHHHHcC-CCEEEECCCCCccccceeec
Confidence 3445556664566655555543222 33333333 4555555667788888877653 6666441 232 11222
Q ss_pred ---cccHHHH---HHHHHhcCCEEEEeCCCCCC-CccchhccCCcEEE
Q 012321 312 ---CVDVKLV---SDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 312 ---v~dl~~I---~ela~~~gillIvD~t~a~~-~~~~pl~~gaDivv 352 (466)
+.++..| .+.++++++.+|.|.-.-++ -..+.+.+|+|.++
T Consensus 311 ~~g~p~~~~~~~~~~~~~~~~~~viadGGi~~~~di~kAla~GA~~v~ 358 (486)
T PRK05567 311 GVGVPQITAIADAAEAAKKYGIPVIADGGIRYSGDIAKALAAGASAVM 358 (486)
T ss_pred CCCcCHHHHHHHHHHHhccCCCeEEEcCCCCCHHHHHHHHHhCCCEEE
Confidence 2234444 55555679999999875544 33567788999766
No 425
>PLN02274 inosine-5'-monophosphate dehydrogenase
Probab=45.89 E-value=1.3e+02 Score=33.04 Aligned_cols=110 Identities=20% Similarity=0.187 Sum_probs=67.7
Q ss_pred HHHhccCCCEEEEcCCCccchHH---HHHhhcccC-CcEEEEeCCCCHHHHHHhccCCCceEEEEeC-CC----CC--C-
Q 012321 242 LLALVPAGGHIVTTTDCYRKTRI---FIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTES-PT----NP--F- 309 (466)
Q Consensus 242 l~all~pGD~VLv~~~~y~~t~~---~~~~~l~~~-gi~v~~vd~~D~e~Le~ai~~~~tklV~les-Ps----NP--t- 309 (466)
+..++..|-.||+-+..++.... .++.+-+.+ +..+..-+..+.++.+.+++.. ..+|.+.. |. ++ +
T Consensus 253 ~~~l~~ag~d~i~iD~~~g~~~~~~~~i~~ik~~~p~~~vi~g~v~t~e~a~~a~~aG-aD~i~vg~g~G~~~~t~~~~~ 331 (505)
T PLN02274 253 LEHLVKAGVDVVVLDSSQGDSIYQLEMIKYIKKTYPELDVIGGNVVTMYQAQNLIQAG-VDGLRVGMGSGSICTTQEVCA 331 (505)
T ss_pred HHHHHHcCCCEEEEeCCCCCcHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHcC-cCEEEECCCCCccccCccccc
Confidence 34566778666666667765443 333333333 3555444667788888887653 67776631 11 11 2
Q ss_pred -c--ccccHHHHHHHHHhcCCEEEEeCCCCCC-CccchhccCCcEEE
Q 012321 310 -L--RCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 310 -G--~v~dl~~I~ela~~~gillIvD~t~a~~-~~~~pl~~gaDivv 352 (466)
| ....+..+.+++++.++++|.|.-...+ -..+.+..|+|.|+
T Consensus 332 ~g~~~~~~i~~~~~~~~~~~vpVIadGGI~~~~di~kAla~GA~~V~ 378 (505)
T PLN02274 332 VGRGQATAVYKVASIAAQHGVPVIADGGISNSGHIVKALTLGASTVM 378 (505)
T ss_pred cCCCcccHHHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 2 2236778899999999999999875543 33566777888554
No 426
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=44.63 E-value=2.9e+02 Score=26.48 Aligned_cols=93 Identities=13% Similarity=0.200 Sum_probs=54.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCC
Q 012321 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 226 e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesP 305 (466)
..++++++|..|..-+ ..+++.|.+|.+-.+....- +.......+++... +..+.+.+.. .-+|++.+.
T Consensus 13 k~VlvvGgG~va~rKa-~~ll~~ga~v~Vvs~~~~~e---l~~~~~~~~i~~~~-~~~~~~~~~~------~~lviaAt~ 81 (210)
T COG1648 13 KKVLVVGGGSVALRKA-RLLLKAGADVTVVSPEFEPE---LKALIEEGKIKWIE-REFDAEDLDD------AFLVIAATD 81 (210)
T ss_pred CEEEEECCCHHHHHHH-HHHHhcCCEEEEEcCCccHH---HHHHHHhcCcchhh-cccChhhhcC------ceEEEEeCC
Confidence 4688899999776654 56788999988888877322 22233333333221 2223333321 457777554
Q ss_pred CCCCcccccHHHHHHHHHhcCCEE-EEeCC
Q 012321 306 TNPFLRCVDVKLVSDLCHKKGAIV-CIDGT 334 (466)
Q Consensus 306 sNPtG~v~dl~~I~ela~~~gill-IvD~t 334 (466)
+ +- -=++|.+.|+++++++ ++|..
T Consensus 82 d-~~----ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 82 D-EE----LNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred C-HH----HHHHHHHHHHHhCCceeccCCc
Confidence 4 11 1378999999998765 34433
No 427
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=44.30 E-value=21 Score=40.01 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=31.9
Q ss_pred CCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCC
Q 012321 304 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 304 sPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~ 337 (466)
.|++..|...|++++++.||++||-||+|-+++-
T Consensus 205 Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~H 238 (628)
T COG0296 205 APTSRYGTPEDFKALVDAAHQAGIGVILDWVPNH 238 (628)
T ss_pred cccccCCCHHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 7999999999999999999999999999998653
No 428
>PRK13937 phosphoheptose isomerase; Provisional
Probab=43.79 E-value=2.6e+02 Score=26.03 Aligned_cols=41 Identities=12% Similarity=-0.097 Sum_probs=27.0
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEe
Q 012321 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLH 353 (466)
Q Consensus 309 tG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~ 353 (466)
.|...++-++.+.|+++|+.+|.= +.....++...+|+++.
T Consensus 116 sG~t~~~~~~~~~ak~~g~~~I~i----T~~~~s~L~~~ad~~l~ 156 (188)
T PRK13937 116 SGNSPNVLAALEKARELGMKTIGL----TGRDGGKMKELCDHLLI 156 (188)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEE----eCCCCChhHHhCCEEEE
Confidence 477788999999999999776642 22233444444566553
No 429
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=43.50 E-value=1e+02 Score=23.57 Aligned_cols=60 Identities=15% Similarity=0.211 Sum_probs=35.6
Q ss_pred HhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEe
Q 012321 267 ETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 267 ~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD 332 (466)
...++..|+++..+... .+.++. + +.-+|++ .|.-..-.-.++++|.+++++=|-++|+|
T Consensus 11 ~~~L~~~g~~v~~~~~~-~~~l~~---~-~~tll~i-~~~~~~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 11 YQLLEEQGVKVERWRKP-YEALEA---D-DGTLLVI-GPDLRLSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHCCCeeEEeccc-HHHhCC---C-CCEEEEE-eCCCCCCchHHHHHHHHHHHcCCEEEEeC
Confidence 35566779988766543 444432 2 2445555 44422111356789999998767777664
No 430
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=43.14 E-value=2.4e+02 Score=27.30 Aligned_cols=81 Identities=19% Similarity=0.192 Sum_probs=43.6
Q ss_pred cccCCcEEEE--eCCCCHHHHHHhccCCCceEEEEeCCCCCC--cccc------cHHHHHHHHHhcC--CEEEEeCCCCC
Q 012321 270 LPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV------DVKLVSDLCHKKG--AIVCIDGTFAT 337 (466)
Q Consensus 270 l~~~gi~v~~--vd~~D~e~Le~ai~~~~tklV~lesPsNPt--G~v~------dl~~I~ela~~~g--illIvD~t~a~ 337 (466)
.+..|++.-. -+...++.++..+.. +.+|.+-+. ||- |.-. .++++.++.++++ +.+-+|.-...
T Consensus 106 Ir~~g~k~GlalnP~T~~~~i~~~l~~--vD~VlvMtV-~PGf~GQ~fi~~~l~KI~~l~~~~~~~~~~~~IeVDGGI~~ 182 (223)
T PRK08745 106 IKSHGCQAGLVLNPATPVDILDWVLPE--LDLVLVMSV-NPGFGGQAFIPSALDKLRAIRKKIDALGKPIRLEIDGGVKA 182 (223)
T ss_pred HHHCCCceeEEeCCCCCHHHHHHHHhh--cCEEEEEEE-CCCCCCccccHHHHHHHHHHHHHHHhcCCCeeEEEECCCCH
Confidence 4445554322 244678888888764 455554333 242 3332 2444555555554 77889965332
Q ss_pred CCccchhccCCcEEEe
Q 012321 338 PLNQKALSLGADLVLH 353 (466)
Q Consensus 338 ~~~~~pl~~gaDivv~ 353 (466)
-......+.|+|+++-
T Consensus 183 eti~~l~~aGaDi~V~ 198 (223)
T PRK08745 183 DNIGAIAAAGADTFVA 198 (223)
T ss_pred HHHHHHHHcCCCEEEE
Confidence 2223345678998773
No 431
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=42.27 E-value=1.5e+02 Score=30.68 Aligned_cols=93 Identities=18% Similarity=0.220 Sum_probs=47.5
Q ss_pred EEeCCHHHHHHHHHHHhccCCC--EEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCC
Q 012321 229 VIMASGMSASTVMLLALVPAGG--HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 229 v~~~SG~aAi~~al~all~pGD--~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPs 306 (466)
++++.|..+- .++..|.+.++ +|++.+..-.....+... +....++...+|..|.++|++.+++ .++|+-+.|.
T Consensus 2 lvlG~G~vG~-~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~--~dvVin~~gp 77 (386)
T PF03435_consen 2 LVLGAGRVGS-AIARLLARRGPFEEVTVADRNPEKAERLAEK-LLGDRVEAVQVDVNDPESLAELLRG--CDVVINCAGP 77 (386)
T ss_dssp EEE--SHHHH-HHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTT--SSEEEE-SSG
T ss_pred EEEcCcHHHH-HHHHHHhcCCCCCcEEEEECCHHHHHHHHhh-ccccceeEEEEecCCHHHHHHHHhc--CCEEEECCcc
Confidence 4555565332 23344555443 676654433332222211 1334677788899999999999976 4777765544
Q ss_pred CCCcccccHHHHHHHHHhcCCEEEEe
Q 012321 307 NPFLRCVDVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 307 NPtG~v~dl~~I~ela~~~gillIvD 332 (466)
. .-..|.+.|-+.|+. .+|
T Consensus 78 ~------~~~~v~~~~i~~g~~-yvD 96 (386)
T PF03435_consen 78 F------FGEPVARACIEAGVH-YVD 96 (386)
T ss_dssp G------GHHHHHHHHHHHT-E-EEE
T ss_pred c------hhHHHHHHHHHhCCC-eec
Confidence 2 234556666666654 344
No 432
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=41.95 E-value=1.2e+02 Score=27.43 Aligned_cols=74 Identities=14% Similarity=0.077 Sum_probs=49.9
Q ss_pred EEEEcCCC---ccchHHHHHhhcccCCcEEEEeCCC-CH-HHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc
Q 012321 251 HIVTTTDC---YRKTRIFIETVLPKMGITATVIDPA-DM-EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (466)
Q Consensus 251 ~VLv~~~~---y~~t~~~~~~~l~~~gi~v~~vd~~-D~-e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~ 325 (466)
+|++.... |..-..++...+...|+++.+.... .+ |.+.+++++. ..+|.+++-+ -+.....+.+.+.++++
T Consensus 14 rvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp~e~v~aA~~~d-v~vIgvSsl~--g~h~~l~~~lve~lre~ 90 (143)
T COG2185 14 RVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTPEEAVRAAVEED-VDVIGVSSLD--GGHLTLVPGLVEALREA 90 (143)
T ss_pred eEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCHHHHHHHHHhcC-CCEEEEEecc--chHHHHHHHHHHHHHHh
Confidence 56665543 3334455667788889998876532 33 4556666664 8888886665 34556789999999998
Q ss_pred CC
Q 012321 326 GA 327 (466)
Q Consensus 326 gi 327 (466)
|.
T Consensus 91 G~ 92 (143)
T COG2185 91 GV 92 (143)
T ss_pred CC
Confidence 74
No 433
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=41.75 E-value=2.1e+02 Score=27.65 Aligned_cols=80 Identities=23% Similarity=0.309 Sum_probs=42.1
Q ss_pred cccCCcEEEE--eCCCCHHHHHHhccCCCceEEEEeCCCCCC--ccc-c--c---HHHHHHHHHhcC--CEEEEeCCCCC
Q 012321 270 LPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRC-V--D---VKLVSDLCHKKG--AIVCIDGTFAT 337 (466)
Q Consensus 270 l~~~gi~v~~--vd~~D~e~Le~ai~~~~tklV~lesPsNPt--G~v-~--d---l~~I~ela~~~g--illIvD~t~a~ 337 (466)
.+..|++.-. -+....+.++..+.. ..+|.+-+. ||. |.- . . ++++.++.+++| +.+.+|.-...
T Consensus 102 ik~~g~k~GlalnP~Tp~~~i~~~l~~--~D~vlvMtV-~PGfgGq~fi~~~lekI~~l~~~~~~~~~~~~I~vdGGI~~ 178 (220)
T PRK08883 102 IKEHGCQAGVVLNPATPLHHLEYIMDK--VDLILLMSV-NPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVKV 178 (220)
T ss_pred HHHcCCcEEEEeCCCCCHHHHHHHHHh--CCeEEEEEe-cCCCCCceecHhHHHHHHHHHHHHHhcCCCeeEEEECCCCH
Confidence 4445554332 234567888887764 455555333 343 321 1 2 344444444444 77889965332
Q ss_pred CCccchhccCCcEEE
Q 012321 338 PLNQKALSLGADLVL 352 (466)
Q Consensus 338 ~~~~~pl~~gaDivv 352 (466)
.-.....+.|+|+++
T Consensus 179 eni~~l~~aGAd~vV 193 (220)
T PRK08883 179 DNIREIAEAGADMFV 193 (220)
T ss_pred HHHHHHHHcCCCEEE
Confidence 222334567888776
No 434
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=41.10 E-value=1.3e+02 Score=32.71 Aligned_cols=112 Identities=17% Similarity=0.172 Sum_probs=67.1
Q ss_pred HHHHHhccCCCEEEEcCCCccchHH---HHHhhcccC-CcEEEEeCCCCHHHHHHhccCCCceEEEEe-CCCC------C
Q 012321 240 VMLLALVPAGGHIVTTTDCYRKTRI---FIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------P 308 (466)
Q Consensus 240 ~al~all~pGD~VLv~~~~y~~t~~---~~~~~l~~~-gi~v~~vd~~D~e~Le~ai~~~~tklV~le-sPsN------P 308 (466)
..+.++++.|-.+|.-+..++.+.. .++.+-+.+ ++.+..-+..+.++.+.+++.. ...|.+. .|.. .
T Consensus 244 ~~~~~l~~ag~d~i~id~a~G~s~~~~~~i~~ik~~~~~~~v~aG~V~t~~~a~~~~~aG-ad~I~vg~g~Gs~~~t~~~ 322 (495)
T PTZ00314 244 ERAAALIEAGVDVLVVDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAG-ADGLRIGMGSGSICITQEV 322 (495)
T ss_pred HHHHHHHHCCCCEEEEecCCCCchHHHHHHHHHHhhCCCceEEECCcCCHHHHHHHHHcC-CCEEEECCcCCcccccchh
Confidence 3445677778666666666664332 333333333 3444333556788888888764 6777652 1221 0
Q ss_pred C--cc--cccHHHHHHHHHhcCCEEEEeCCCCCC-CccchhccCCcEEE
Q 012321 309 F--LR--CVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 309 t--G~--v~dl~~I~ela~~~gillIvD~t~a~~-~~~~pl~~gaDivv 352 (466)
+ |. +..+.++.++|+++|+.+|.|.-..++ -..+.+.+|+|.|+
T Consensus 323 ~~~g~p~~~ai~~~~~~~~~~~v~vIadGGi~~~~di~kAla~GA~~Vm 371 (495)
T PTZ00314 323 CAVGRPQASAVYHVARYARERGVPCIADGGIKNSGDICKALALGADCVM 371 (495)
T ss_pred ccCCCChHHHHHHHHHHHhhcCCeEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 1 11 113456778889999999999875554 33566788998665
No 435
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=41.07 E-value=1.3e+02 Score=23.42 Aligned_cols=22 Identities=14% Similarity=0.086 Sum_probs=17.0
Q ss_pred CcccccHHHHHHHHHhcCCEEE
Q 012321 309 FLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 309 tG~v~dl~~I~ela~~~gillI 330 (466)
.|...++.++.+.++++|+.++
T Consensus 57 sg~t~~~~~~~~~a~~~g~~ii 78 (87)
T cd04795 57 SGRTEELLAALEIAKELGIPVI 78 (87)
T ss_pred CCCCHHHHHHHHHHHHcCCeEE
Confidence 3556778889999999987665
No 436
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=41.00 E-value=65 Score=33.26 Aligned_cols=105 Identities=15% Similarity=0.136 Sum_probs=59.0
Q ss_pred EEEeCCHHH-HHHHHHHHhccCCCEEEEcCCCccchHHHHH---hh-cccCCcEEEEeCCCCHHHHHHhccCCCc-eEEE
Q 012321 228 TVIMASGMS-ASTVMLLALVPAGGHIVTTTDCYRKTRIFIE---TV-LPKMGITATVIDPADMEGLEAALNNNNV-SLFF 301 (466)
Q Consensus 228 ~v~~~SG~a-Ai~~al~all~pGD~VLv~~~~y~~t~~~~~---~~-l~~~gi~v~~vd~~D~e~Le~ai~~~~t-klV~ 301 (466)
.|++++|.. -=..+...|++.|+.|++.++.-......+. .+ .+..++.+...|..|.+.|++.++..+. .++.
T Consensus 4 ~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~H 83 (343)
T KOG1371|consen 4 HVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVMH 83 (343)
T ss_pred EEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEEe
Confidence 456666652 1123445678899999888766544333332 22 2234678888899999999998876433 3333
Q ss_pred E-------eCCCCCCcccc-c---HHHHHHHHHhcCCEEEEe
Q 012321 302 T-------ESPTNPFLRCV-D---VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 302 l-------esPsNPtG~v~-d---l~~I~ela~~~gillIvD 332 (466)
+ ++--||+-... . --.+.+.++++|..-++=
T Consensus 84 fa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~ 125 (343)
T KOG1371|consen 84 FAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVF 125 (343)
T ss_pred ehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEE
Confidence 3 11123321111 1 125667778887544443
No 437
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=40.98 E-value=1.8e+02 Score=24.28 Aligned_cols=85 Identities=14% Similarity=0.116 Sum_probs=52.1
Q ss_pred HHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCc
Q 012321 264 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN 340 (466)
Q Consensus 264 ~~~~~~l~~~gi~v~~vd~~-D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~--gillIvD~t~a~~~~ 340 (466)
..+...++..|.++.+.... ..+++.+.+.+.++++|.++.-. +....+++.+.++.+++ ++.+++=..+.+...
T Consensus 17 ~~~~~~l~~~G~~v~~l~~~~~~~~~~~~i~~~~pdiV~iS~~~--~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~t~~~ 94 (125)
T cd02065 17 NIVAIALRDNGFEVIDLGVDVPPEEIVEAAKEEDADVVGLSALS--TTHMEAMKLVIEALKELGIDIPVVVGGAHPTADP 94 (125)
T ss_pred HHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEEecch--HhHHHHHHHHHHHHHhcCCCCeEEEeCCcCCccc
Confidence 33445577788888877533 45666666655568899884433 12224566667776766 488888777665443
Q ss_pred cchhccCCcEEEe
Q 012321 341 QKALSLGADLVLH 353 (466)
Q Consensus 341 ~~pl~~gaDivv~ 353 (466)
.. ...|+++.
T Consensus 95 ~~---~~~d~~~~ 104 (125)
T cd02065 95 EE---PKVDAVVI 104 (125)
T ss_pred cc---cccceeee
Confidence 33 34566553
No 438
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=40.75 E-value=1.3e+02 Score=32.34 Aligned_cols=90 Identities=13% Similarity=0.198 Sum_probs=53.2
Q ss_pred ccCCCEE-EEcCCCccc-hHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHH
Q 012321 246 VPAGGHI-VTTTDCYRK-TRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH 323 (466)
Q Consensus 246 l~pGD~V-Lv~~~~y~~-t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~ 323 (466)
...|..| ++....|.. ....+.......|+.+.. ..++..+.+.+..+...+|++.+|..+.-....++++.++.+
T Consensus 249 ~~~G~~V~Lit~Dt~R~aA~eQLk~yAe~lgvp~~~--~~~~~~l~~~l~~~~~D~VLIDTaGr~~rd~~~l~eL~~~~~ 326 (432)
T PRK12724 249 LHMGKSVSLYTTDNYRIAAIEQLKRYADTMGMPFYP--VKDIKKFKETLARDGSELILIDTAGYSHRNLEQLERMQSFYS 326 (432)
T ss_pred HhcCCeEEEecccchhhhHHHHHHHHHHhcCCCeee--hHHHHHHHHHHHhCCCCEEEEeCCCCCccCHHHHHHHHHHHH
Confidence 4567655 444455554 233344445556665532 223555555554334689999998765444556677776665
Q ss_pred h------cCCEEEEeCCCCC
Q 012321 324 K------KGAIVCIDGTFAT 337 (466)
Q Consensus 324 ~------~gillIvD~t~a~ 337 (466)
. ...+||+|.+...
T Consensus 327 ~~~~~~~~e~~LVLsAt~~~ 346 (432)
T PRK12724 327 CFGEKDSVENLLVLSSTSSY 346 (432)
T ss_pred hhcCCCCCeEEEEEeCCCCH
Confidence 3 2578999988653
No 439
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=40.72 E-value=2.1e+02 Score=30.26 Aligned_cols=109 Identities=18% Similarity=0.243 Sum_probs=68.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeC
Q 012321 226 ESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTES 304 (466)
Q Consensus 226 e~~v~~~SG~aAi~~al~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~les 304 (466)
..++++++|.-+-.. +..+.+.| .+|.+.+-.-....+..... .-+++...+|..|.+++.++|++. .+|+-.-
T Consensus 2 ~~ilviGaG~Vg~~v-a~~la~~~d~~V~iAdRs~~~~~~i~~~~--~~~v~~~~vD~~d~~al~~li~~~--d~VIn~~ 76 (389)
T COG1748 2 MKILVIGAGGVGSVV-AHKLAQNGDGEVTIADRSKEKCARIAELI--GGKVEALQVDAADVDALVALIKDF--DLVINAA 76 (389)
T ss_pred CcEEEECCchhHHHH-HHHHHhCCCceEEEEeCCHHHHHHHHhhc--cccceeEEecccChHHHHHHHhcC--CEEEEeC
Confidence 357788888744333 33445555 46666555443333222111 115778888999999999999874 7777777
Q ss_pred CCCCCcccc------------------cHHHHHHHHHhcCCEEEEeCCCCCCC
Q 012321 305 PTNPFLRCV------------------DVKLVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 305 PsNPtG~v~------------------dl~~I~ela~~~gillIvD~t~a~~~ 339 (466)
|..-+-.+. +..++.+.|++.|+..|.+.=+..++
T Consensus 77 p~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi 129 (389)
T COG1748 77 PPFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGI 129 (389)
T ss_pred CchhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcch
Confidence 754332221 13567788888898888887776654
No 440
>smart00642 Aamy Alpha-amylase domain.
Probab=40.66 E-value=27 Score=32.13 Aligned_cols=29 Identities=28% Similarity=0.322 Sum_probs=25.6
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 308 PtG~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
..|...|++++++.||++|+.+|+|-++.
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 46788899999999999999999998854
No 441
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=40.45 E-value=76 Score=32.53 Aligned_cols=100 Identities=18% Similarity=0.183 Sum_probs=61.6
Q ss_pred EEEeCCHHHHH-HHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEE----
Q 012321 228 TVIMASGMSAS-TVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFT---- 302 (466)
Q Consensus 228 ~v~~~SG~aAi-~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~l---- 302 (466)
.|++++|..=| ..++..|++.|-.|++-+....+....+.... +++...|..|-+.|.+.+.++++..|+=
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~----~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ----FKFYEGDLLDRALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc----CceEEeccccHHHHHHHHHhcCCCEEEECccc
Confidence 46677776322 44556778899888888877777665443211 4566677888888998888766655542
Q ss_pred ----eCCCCCCcc----cccHHHHHHHHHhcCCEEEE
Q 012321 303 ----ESPTNPFLR----CVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 303 ----esPsNPtG~----v~dl~~I~ela~~~gillIv 331 (466)
|+..+|.-. +.-.-.|.+.++++|+.=++
T Consensus 78 ~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~v 114 (329)
T COG1087 78 ISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFI 114 (329)
T ss_pred cccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEE
Confidence 444444211 11234677888888865333
No 442
>PRK14057 epimerase; Provisional
Probab=40.26 E-value=3e+02 Score=27.34 Aligned_cols=71 Identities=20% Similarity=0.225 Sum_probs=41.6
Q ss_pred eCCCCHHHHHHhccCCCceEEEEeCCCCCC--cccc-c-----HHHHHHHHHhcC--CEEEEeCCCCCCCccchhccCCc
Q 012321 280 IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV-D-----VKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGAD 349 (466)
Q Consensus 280 vd~~D~e~Le~ai~~~~tklV~lesPsNPt--G~v~-d-----l~~I~ela~~~g--illIvD~t~a~~~~~~pl~~gaD 349 (466)
-+...++.++..+.. +.+|.+-+. ||- |.-. + ++++.++.+++| +.+-+|.-....-.....+.|+|
T Consensus 140 nP~Tp~e~i~~~l~~--vD~VLvMtV-~PGfgGQ~Fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGad 216 (254)
T PRK14057 140 CPATPLDVIIPILSD--VEVIQLLAV-NPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGID 216 (254)
T ss_pred CCCCCHHHHHHHHHh--CCEEEEEEE-CCCCCchhccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCC
Confidence 345678888888864 455555333 342 4332 1 444555555654 78999975443323344567999
Q ss_pred EEEe
Q 012321 350 LVLH 353 (466)
Q Consensus 350 ivv~ 353 (466)
+++.
T Consensus 217 ~~V~ 220 (254)
T PRK14057 217 RVVS 220 (254)
T ss_pred EEEE
Confidence 8774
No 443
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional
Probab=39.18 E-value=3.1e+02 Score=29.06 Aligned_cols=109 Identities=15% Similarity=0.051 Sum_probs=52.7
Q ss_pred HHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEE--eCCCCH-HHHHHhccCCCceEEEEeCCCCCCcccccHHH
Q 012321 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADM-EGLEAALNNNNVSLFFTESPTNPFLRCVDVKL 317 (466)
Q Consensus 242 l~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~--vd~~D~-e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~ 317 (466)
+..+.+.| |.+.+..-.-..+........++.|+.+.. +.+.++ +.++.. .. .+..|.+-+-.+|.+.-..++.
T Consensus 243 v~~~a~aGAD~vTVH~ea~~~ti~~ai~~akk~GikvgVD~lnp~tp~e~i~~l-~~-~vD~Vllht~vdp~~~~~~~~k 320 (391)
T PRK13307 243 ARMAADATADAVVISGLAPISTIEKAIHEAQKTGIYSILDMLNVEDPVKLLESL-KV-KPDVVELHRGIDEEGTEHAWGN 320 (391)
T ss_pred HHHHHhcCCCEEEEeccCCHHHHHHHHHHHHHcCCEEEEEEcCCCCHHHHHHHh-hC-CCCEEEEccccCCCcccchHHH
Confidence 33445556 555443221111222222445667776543 233344 444443 33 3677777554455443233445
Q ss_pred HHHHHH-hcCCEEEEeCCCCCCCccchhccCCcEEE
Q 012321 318 VSDLCH-KKGAIVCIDGTFATPLNQKALSLGADLVL 352 (466)
Q Consensus 318 I~ela~-~~gillIvD~t~a~~~~~~pl~~gaDivv 352 (466)
|.++.+ ..++.+.+|.-....-.....+.|+|+++
T Consensus 321 I~~ikk~~~~~~I~VdGGI~~eti~~l~~aGADivV 356 (391)
T PRK13307 321 IKEIKKAGGKILVAVAGGVRVENVEEALKAGADILV 356 (391)
T ss_pred HHHHHHhCCCCcEEEECCcCHHHHHHHHHcCCCEEE
Confidence 554443 24678899864332112234467888776
No 444
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=38.85 E-value=2e+02 Score=27.02 Aligned_cols=44 Identities=14% Similarity=0.007 Sum_probs=30.0
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEecc
Q 012321 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSA 355 (466)
Q Consensus 308 PtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~ 355 (466)
..|...++-++++.|+++|+.+|.= +.....++..-+|+++...
T Consensus 120 ~SG~t~~~i~~~~~ak~~g~~iI~i----T~~~~s~l~~~ad~~l~~~ 163 (192)
T PRK00414 120 TSGNSGNIIKAIEAARAKGMKVITL----TGKDGGKMAGLADIEIRVP 163 (192)
T ss_pred CCCCCHHHHHHHHHHHHCCCeEEEE----eCCCCChhHHhCCEEEEeC
Confidence 3488889999999999999887752 2233445544567766543
No 445
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=38.77 E-value=2.9e+02 Score=29.64 Aligned_cols=91 Identities=12% Similarity=0.172 Sum_probs=52.4
Q ss_pred HhccCCCEE-EEcCCCcc-chHHHHHhhcccCCcEEEEeCCCCHHHHHHhccC----CCceEEEEeCCCCCCcccccHHH
Q 012321 244 ALVPAGGHI-VTTTDCYR-KTRIFIETVLPKMGITATVIDPADMEGLEAALNN----NNVSLFFTESPTNPFLRCVDVKL 317 (466)
Q Consensus 244 all~pGD~V-Lv~~~~y~-~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~----~~tklV~lesPsNPtG~v~dl~~ 317 (466)
.+...|-+| ++..+.|. +....+.......|+.+... .+++++.+++.. .+..+|++.++....-....+++
T Consensus 264 ~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~--~d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~E 341 (436)
T PRK11889 264 QFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV--RDEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEE 341 (436)
T ss_pred HHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec--CCHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHH
Confidence 344556444 45555664 33444445555667776543 356666666631 12579999998743322233556
Q ss_pred HHHHHHh---cCCEEEEeCCCC
Q 012321 318 VSDLCHK---KGAIVCIDGTFA 336 (466)
Q Consensus 318 I~ela~~---~gillIvD~t~a 336 (466)
+.++.+. +.++|++|.+..
T Consensus 342 L~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 342 MIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred HHHHHhhcCCCeEEEEECCccC
Confidence 6665543 567888888744
No 446
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=38.20 E-value=3.4e+02 Score=28.07 Aligned_cols=53 Identities=23% Similarity=0.201 Sum_probs=36.6
Q ss_pred ceEEEEeC-C-C--CCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-------cchhccCCc
Q 012321 297 VSLFFTES-P-T--NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------QKALSLGAD 349 (466)
Q Consensus 297 tklV~les-P-s--NPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-------~~pl~~gaD 349 (466)
..+++++. . + +.+-...|+..|..+-+..+.++|+|-.++.+.. ......|+|
T Consensus 229 ~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G~~~~v~~~a~AAvA~GAd 292 (335)
T PRK08673 229 PNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATGKRDLVEPLALAAVAAGAD 292 (335)
T ss_pred CeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCccccchHHHHHHHHHhCCC
Confidence 56777764 2 2 2344557899988888778999999999877641 223456887
No 447
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=38.04 E-value=1.5e+02 Score=31.45 Aligned_cols=111 Identities=15% Similarity=0.138 Sum_probs=63.2
Q ss_pred HHHHhccCCCEEEEcCCCccchH---HHHHhhcccC-CcEEEEeCCCCHHHHHHhccCCCceEEEEe-CCCC------CC
Q 012321 241 MLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PF 309 (466)
Q Consensus 241 al~all~pGD~VLv~~~~y~~t~---~~~~~~l~~~-gi~v~~vd~~D~e~Le~ai~~~~tklV~le-sPsN------Pt 309 (466)
-+..++..|-.||+.+..++... ..++.+-+.+ ++.+..-+..+.++.+.+++-. ...|.+. .|.. .+
T Consensus 157 ~v~~lv~aGvDvI~iD~a~g~~~~~~~~v~~ik~~~p~~~vi~g~V~T~e~a~~l~~aG-aD~I~vG~g~Gs~c~tr~~~ 235 (404)
T PRK06843 157 RVEELVKAHVDILVIDSAHGHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVG-ADCLKVGIGPGSICTTRIVA 235 (404)
T ss_pred HHHHHHhcCCCEEEEECCCCCChhHHHHHHHHHhhCCCCcEEEEecCCHHHHHHHHHcC-CCEEEECCCCCcCCcceeec
Confidence 34566677866666555555322 2233332233 3444333566778877777653 6666653 2221 12
Q ss_pred cc-cc---cHHHHHHHHHhcCCEEEEeCCCCCC-CccchhccCCcEEE
Q 012321 310 LR-CV---DVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 310 G~-v~---dl~~I~ela~~~gillIvD~t~a~~-~~~~pl~~gaDivv 352 (466)
|. .. .+..+.+++++.++.+|.|.-..++ -..+.+.+|+|.|+
T Consensus 236 g~g~p~ltai~~v~~~~~~~~vpVIAdGGI~~~~Di~KALalGA~aVm 283 (404)
T PRK06843 236 GVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 (404)
T ss_pred CCCCChHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 21 12 3445677778889999999865443 34567788888665
No 448
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=37.98 E-value=2e+02 Score=30.18 Aligned_cols=53 Identities=9% Similarity=0.196 Sum_probs=35.8
Q ss_pred EeCCCCHHHHHHhccCCCceEEEEeCCCCCC--------ccccc----HHHHHHHHHhcCCEEEE
Q 012321 279 VIDPADMEGLEAALNNNNVSLFFTESPTNPF--------LRCVD----VKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 279 ~vd~~D~e~Le~ai~~~~tklV~lesPsNPt--------G~v~d----l~~I~ela~~~gillIv 331 (466)
.+...+++.+.+.+...++++|++.+.++.. |.... +.+|.++++++|+.+++
T Consensus 141 l~~e~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 141 LLAETNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EEccCcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 3445678888888876568999999876432 22222 34578889999976543
No 449
>PLN02672 methionine S-methyltransferase
Probab=37.52 E-value=1.2e+02 Score=36.40 Aligned_cols=124 Identities=13% Similarity=0.107 Sum_probs=68.2
Q ss_pred cCCCCchh-HHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHh------ccCCCEEEEcCCCccchHHHHHh
Q 012321 204 YGRYGNPT-TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLAL------VPAGGHIVTTTDCYRKTRIFIET 268 (466)
Q Consensus 204 Y~R~~~p~-~~~Lee~lA~l~g--------~e~~v~~~SG~aAi~~al~al------l~pGD~VLv~~~~y~~t~~~~~~ 268 (466)
|-.|..|. ...+++.+|.+.. .+++++++|-..||..+++.+ +..+ + +.... ..++..
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~---~~~~~~ 491 (1082)
T PLN02672 419 YFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEH---L-TRWLP---KKWLTS 491 (1082)
T ss_pred CCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhh---h-hccCC---HHHHhH
Confidence 44443333 5567777777543 367888999999998777643 2222 1 11111 111111
Q ss_pred h-------cccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC
Q 012321 269 V-------LPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 269 ~-------l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t 334 (466)
+ ....+..++.++. ..-+.+.+.|++-++++|++..-.-..-+..-++.|.+.+++.|+.|+.|..
T Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 492 LAIENATSDSKSDDVITVIEAPRQSDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred hhhhcccccCccCCeEEEEeCCCcchHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehh
Confidence 1 1222344444442 1123445555554578888643332222223478889999999999999987
No 450
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=37.35 E-value=98 Score=25.53 Aligned_cols=62 Identities=13% Similarity=0.037 Sum_probs=40.3
Q ss_pred HHHhhcccCCcEEEEe---CCCCH--HHHHHhccCCCceEEEEeCCCCCCccc--ccHHHHHHHHHhcCCEEEEeC
Q 012321 265 FIETVLPKMGITATVI---DPADM--EGLEAALNNNNVSLFFTESPTNPFLRC--VDVKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 265 ~~~~~l~~~gi~v~~v---d~~D~--e~Le~ai~~~~tklV~lesPsNPtG~v--~dl~~I~ela~~~gillIvD~ 333 (466)
.+...++++|.+..+. +.... ..|++.+.+ +.+|++- |..+ .-...+.+.|+++|++++.=.
T Consensus 14 ~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~--aD~VIv~-----t~~vsH~~~~~vk~~akk~~ip~~~~~ 82 (97)
T PF10087_consen 14 RYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKK--ADLVIVF-----TDYVSHNAMWKVKKAAKKYGIPIIYSR 82 (97)
T ss_pred HHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCC--CCEEEEE-----eCCcChHHHHHHHHHHHHcCCcEEEEC
Confidence 3456677889888877 22222 347877764 5777762 2222 136788999999999887543
No 451
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=37.22 E-value=91 Score=28.06 Aligned_cols=48 Identities=13% Similarity=0.096 Sum_probs=33.3
Q ss_pred HHHHHhccCCCceEEEEeCC--CCCCcccccHHHHHHHHHhcCCEEEEeCC
Q 012321 286 EGLEAALNNNNVSLFFTESP--TNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesP--sNPtG~v~dl~~I~ela~~~gillIvD~t 334 (466)
.++.+.|.+.++.+|+. +| ..+-+...|...|.+.|-+++++++..-.
T Consensus 65 ~~i~~~I~~g~i~lVIn-t~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 65 QQIGALIAEGKIDMLIF-FRDPLTAQPHDPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred hhHHHHHHcCceeEEEE-ecCCCCCCcccchHHHHHHHHHHcCCCEEcCHH
Confidence 44666666655777654 45 44444356888999999999999886543
No 452
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=36.96 E-value=2.8e+02 Score=26.59 Aligned_cols=101 Identities=15% Similarity=0.080 Sum_probs=55.7
Q ss_pred HHHHHhccCCCEEEEcCCCccchHHHHHhhcccCC-cEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHH
Q 012321 240 VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (466)
Q Consensus 240 ~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~g-i~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I 318 (466)
.+..++...|=+++--+..-+.....++.+.+.++ +.+---...|.++++++++.. .+.++ +|+- -.++
T Consensus 24 ~~~~al~~~Gi~~iEit~~t~~a~~~i~~l~~~~~~~~vGAGTVl~~~~a~~a~~aG-A~Fiv--sP~~-------~~~v 93 (204)
T TIGR01182 24 PLAKALIEGGLRVLEVTLRTPVALDAIRLLRKEVPDALIGAGTVLNPEQLRQAVDAG-AQFIV--SPGL-------TPEL 93 (204)
T ss_pred HHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHcC-CCEEE--CCCC-------CHHH
Confidence 34456666664433222222333344444333332 222222346889999998764 55554 6661 2589
Q ss_pred HHHHHhcCCEEEEeCCCCCCCccchhccCCcEE
Q 012321 319 SDLCHKKGAIVCIDGTFATPLNQKALSLGADLV 351 (466)
Q Consensus 319 ~ela~~~gillIvD~t~a~~~~~~pl~~gaDiv 351 (466)
.+.|+++|++++-- +....-.....++|+|++
T Consensus 94 ~~~~~~~~i~~iPG-~~TptEi~~A~~~Ga~~v 125 (204)
T TIGR01182 94 AKHAQDHGIPIIPG-VATPSEIMLALELGITAL 125 (204)
T ss_pred HHHHHHcCCcEECC-CCCHHHHHHHHHCCCCEE
Confidence 99999999988762 222122245567788876
No 453
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=36.93 E-value=2.9e+02 Score=27.26 Aligned_cols=91 Identities=10% Similarity=0.064 Sum_probs=43.8
Q ss_pred HHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEE-EeC-CCCHHHHHHhccCCCceEEEEeCCCCCCccc----c
Q 012321 241 MLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITAT-VID-PADMEGLEAALNNNNVSLFFTESPTNPFLRC----V 313 (466)
Q Consensus 241 al~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~-~vd-~~D~e~Le~ai~~~~tklV~lesPsNPtG~v----~ 313 (466)
.+..+.+.| |-|++++-.+.....++ ..++..|+... .+. ..+.+.++...+.. ...||+-+.+.-||.- .
T Consensus 107 f~~~~~~aGvdgviipDlp~ee~~~~~-~~~~~~gl~~i~lv~P~T~~eri~~i~~~~-~gfiy~vs~~G~TG~~~~~~~ 184 (256)
T TIGR00262 107 FYAKCKEVGVDGVLVADLPLEESGDLV-EAAKKHGVKPIFLVAPNADDERLKQIAEKS-QGFVYLVSRAGVTGARNRAAS 184 (256)
T ss_pred HHHHHHHcCCCEEEECCCChHHHHHHH-HHHHHCCCcEEEEECCCCCHHHHHHHHHhC-CCCEEEEECCCCCCCcccCCh
Confidence 344444444 56677665543322222 34556676643 333 33456665555432 2356654544556652 2
Q ss_pred cHHHHHHHHHh-cCCEEEEeC
Q 012321 314 DVKLVSDLCHK-KGAIVCIDG 333 (466)
Q Consensus 314 dl~~I~ela~~-~gillIvD~ 333 (466)
++.+..+.+++ .+..+++|-
T Consensus 185 ~~~~~i~~lr~~~~~pi~vgf 205 (256)
T TIGR00262 185 ALNELVKRLKAYSAKPVLVGF 205 (256)
T ss_pred hHHHHHHHHHhhcCCCEEEeC
Confidence 33444444443 355666654
No 454
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=36.67 E-value=3.1e+02 Score=25.74 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=61.3
Q ss_pred CCEEEEcCC---CccchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh
Q 012321 249 GGHIVTTTD---CYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (466)
Q Consensus 249 GD~VLv~~~---~y~~t~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~ 324 (466)
+.+|++... .|.--..++...++..|.++.+... ..++++.+++.+.++.+|.+..-.. ....++.++.+..++
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~--~~~~~~~~~i~~lr~ 159 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMT--TTMGGMKEVIEALKE 159 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccc--ccHHHHHHHHHHHHH
Confidence 346665432 2322234455678889999977653 3578888888776788998854432 234567888888877
Q ss_pred c----CCEEEEeCCCCCCCccchhccCCcEEEecc
Q 012321 325 K----GAIVCIDGTFATPLNQKALSLGADLVLHSA 355 (466)
Q Consensus 325 ~----gillIvD~t~a~~~~~~pl~~gaDivv~S~ 355 (466)
. ++.+++=....+. .-....|+|.+..+.
T Consensus 160 ~~~~~~~~i~vGG~~~~~--~~~~~~GaD~~~~da 192 (201)
T cd02070 160 AGLRDKVKVMVGGAPVNQ--EFADEIGADGYAEDA 192 (201)
T ss_pred CCCCcCCeEEEECCcCCH--HHHHHcCCcEEECCH
Confidence 5 3566665442221 111234777666543
No 455
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=36.40 E-value=1.5e+02 Score=29.99 Aligned_cols=52 Identities=8% Similarity=0.073 Sum_probs=35.0
Q ss_pred eCCCCHHHHHHhccCCCceEEEEeCCC-CCCccccc-----------HHHHHHHHHhcCCEEEE
Q 012321 280 IDPADMEGLEAALNNNNVSLFFTESPT-NPFLRCVD-----------VKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 280 vd~~D~e~Le~ai~~~~tklV~lesPs-NPtG~v~d-----------l~~I~ela~~~gillIv 331 (466)
+|..|.+.+.+.+.+.++.+|+-+... +....-.+ ...|+++|++.|+++|-
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE
Confidence 566788888888877667888764443 22222222 24689999999988764
No 456
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=36.13 E-value=1.3e+02 Score=25.70 Aligned_cols=66 Identities=20% Similarity=0.222 Sum_probs=45.8
Q ss_pred HHHHHhhcccCCcE-EEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC
Q 012321 263 RIFIETVLPKMGIT-ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 263 ~~~~~~~l~~~gi~-v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t 334 (466)
...++.+.+++||+ +.++.+.--|.-.-.+..- +-.|++..+.| .|++.|..+|+++|+.+.++.-
T Consensus 22 ~~~v~~i~~~~gI~diN~IKPGIgEaTRvLLRRv-P~~vLVr~~~~-----pd~~Hl~~LA~ekgVpVe~~~d 88 (100)
T PF15608_consen 22 WAEVERIAERYGISDINLIKPGIGEATRVLLRRV-PWKVLVRDPDD-----PDLAHLLLLAEEKGVPVEVYPD 88 (100)
T ss_pred HHHHHHHHHHhCCCCcccccCChhHHHHHHHhcC-CCEEEECCCCC-----ccHHHHHHHHHHcCCcEEEeCC
Confidence 34455667777764 4445544446555566554 66777877776 6889999999999999887753
No 457
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=35.68 E-value=3.2e+02 Score=26.97 Aligned_cols=43 Identities=28% Similarity=0.203 Sum_probs=27.1
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEecc
Q 012321 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSA 355 (466)
Q Consensus 309 tG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~ 355 (466)
.|...++.++++.|+++|+.+|.= +.....++...+|+++...
T Consensus 197 sG~t~~~~~~~~~ak~~g~~ii~I----T~~~~s~la~~ad~~l~~~ 239 (292)
T PRK11337 197 SGRTSDVIEAVELAKKNGAKIICI----TNSYHSPIAKLADYVICST 239 (292)
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEE----eCCCCChhHHhCCEEEEcC
Confidence 466677889999999999755431 1222334444577777543
No 458
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=35.41 E-value=2.2e+02 Score=31.00 Aligned_cols=113 Identities=18% Similarity=0.141 Sum_probs=64.9
Q ss_pred HHHHHHhccCCCEEEEcCCCccchHHHH---HhhcccC-CcEEEEeCCCCHHHHHHhccCCCceEEE-------EeCCCC
Q 012321 239 TVMLLALVPAGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFF-------TESPTN 307 (466)
Q Consensus 239 ~~al~all~pGD~VLv~~~~y~~t~~~~---~~~l~~~-gi~v~~vd~~D~e~Le~ai~~~~tklV~-------lesPsN 307 (466)
...+..++..|-.+|+.+..++.....+ +.+-+.+ ++.+.--+..+.|..+.+++.. ..+|- +|+-.-
T Consensus 229 ~~~a~~Lv~aGvd~i~~D~a~~~~~~~~~~i~~ik~~~p~~~v~agnv~t~~~a~~l~~aG-ad~v~vgig~gsictt~~ 307 (479)
T PRK07807 229 AAKARALLEAGVDVLVVDTAHGHQEKMLEALRAVRALDPGVPIVAGNVVTAEGTRDLVEAG-ADIVKVGVGPGAMCTTRM 307 (479)
T ss_pred HHHHHHHHHhCCCEEEEeccCCccHHHHHHHHHHHHHCCCCeEEeeccCCHHHHHHHHHcC-CCEEEECccCCccccccc
Confidence 3455567777877777777777543333 2222233 3444433666778877777653 44543 233333
Q ss_pred CCccc-ccHHHHHHHH---HhcCCEEEEeCCCCCC-CccchhccCCcEEE
Q 012321 308 PFLRC-VDVKLVSDLC---HKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 308 PtG~v-~dl~~I~ela---~~~gillIvD~t~a~~-~~~~pl~~gaDivv 352 (466)
.||.- .++..|.+++ +++++.+|.|.-...+ -..+.+..|+|.++
T Consensus 308 ~~~~~~p~~~av~~~~~~~~~~~~~via~ggi~~~~~~~~al~~ga~~v~ 357 (479)
T PRK07807 308 MTGVGRPQFSAVLECAAAARELGAHVWADGGVRHPRDVALALAAGASNVM 357 (479)
T ss_pred ccCCchhHHHHHHHHHHHHHhcCCcEEecCCCCCHHHHHHHHHcCCCeee
Confidence 44433 3455555554 5789999999875443 23456667777544
No 459
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=35.13 E-value=2.3e+02 Score=29.92 Aligned_cols=97 Identities=20% Similarity=0.181 Sum_probs=51.7
Q ss_pred EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCC
Q 012321 228 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 307 (466)
Q Consensus 228 ~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsN 307 (466)
.++++.|-+++.+ ...+.+.|-.|...+.............+...|+++..-...+++.++..+.+ ..+|++ +|.-
T Consensus 3 v~viG~G~sG~s~-a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~--~d~vv~-s~gi 78 (459)
T PRK02705 3 AHVIGLGRSGIAA-ARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQ--PDLVVV-SPGI 78 (459)
T ss_pred EEEEccCHHHHHH-HHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhc--CCEEEE-CCCC
Confidence 4667777666664 45566788888877744332221111224456887754333344544445543 456666 6653
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeC
Q 012321 308 PFLRCVDVKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 308 PtG~v~dl~~I~ela~~~gillIvD~ 333 (466)
| .|- .+.+.|++.|+.++-+-
T Consensus 79 ~----~~~-~~~~~a~~~~i~v~~~~ 99 (459)
T PRK02705 79 P----WDH-PTLVELRERGIEVIGEI 99 (459)
T ss_pred C----CCC-HHHHHHHHcCCcEEEhH
Confidence 3 222 23444556666665543
No 460
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=35.03 E-value=56 Score=30.59 Aligned_cols=45 Identities=20% Similarity=0.292 Sum_probs=35.3
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC--CEEEEeCC
Q 012321 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGT 334 (466)
Q Consensus 284 D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~g--illIvD~t 334 (466)
|..+++++++.+ ...|++ -+|.+.+++++.+.++++| +.+++|=.
T Consensus 12 ~~~~le~~les~-~~~vfl-----L~~~i~~ik~ivk~lK~~gK~vfiHvDLv 58 (181)
T COG1954 12 DNKDLEKALESE-SQYVFL-----LTGHILNIKEIVKKLKNRGKTVFIHVDLV 58 (181)
T ss_pred hHHHHHHHhcCC-CeEEEE-----EechhhhHHHHHHHHHhCCcEEEEEeHHh
Confidence 678889999875 777777 4688999999999999987 45566644
No 461
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=35.02 E-value=3.1e+02 Score=25.95 Aligned_cols=41 Identities=7% Similarity=0.041 Sum_probs=28.0
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE
Q 012321 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIv 331 (466)
..++...++. .++++-+ ..|.-.++.++++++|++|+.+|.
T Consensus 101 ~ql~~~~~~g--Dvli~iS---~SG~s~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 101 KQVRALGHAG--DVLLAIS---TRGNSRDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHcCCCC--CEEEEEe---CCCCCHHHHHHHHHHHHCCCEEEE
Confidence 4455555543 3444322 257778899999999999998876
No 462
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=34.45 E-value=23 Score=33.21 Aligned_cols=83 Identities=22% Similarity=0.284 Sum_probs=49.7
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEecccccccccc
Q 012321 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHN 363 (466)
Q Consensus 284 D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~g 363 (466)
+.++++.+++.+ ...|++ -+|.+.+++.+.+.+|++|-.+++.--...++..+.. | -+|+....
T Consensus 8 ~~~~l~~al~s~-~~~vfL-----l~g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl~~D~~--~--------i~~L~~~~ 71 (175)
T PF04309_consen 8 DEEDLEKALESD-VEVVFL-----LTGDIGNLKDIVKRLKAAGKKVFVHIDLIEGLSRDEA--G--------IEYLKEYG 71 (175)
T ss_dssp CCCCCCCCCCSS-SSEEEE------SEECCCHHHHHHHHHHTT-EEEEECCGEETB-SSHH--H--------HHHHHHTT
T ss_pred CHHHHHHHHcCC-CCEEEE-----EcCcHHHHHHHHHHHHHcCCEEEEEehhcCCCCCCHH--H--------HHHHHHcC
Confidence 345666777664 778887 3588999999999999998655554333333322211 1 12332221
Q ss_pred CceEEEEEeChHHHHHHHHH
Q 012321 364 DVLAGSISGSGKLVTQIRNL 383 (466)
Q Consensus 364 dv~gG~vvg~~eli~~l~~~ 383 (466)
. .-|++.++..+++..++.
T Consensus 72 ~-~dGIISTk~~~i~~Ak~~ 90 (175)
T PF04309_consen 72 K-PDGIISTKSNLIKRAKKL 90 (175)
T ss_dssp ---SEEEESSHHHHHHHHHT
T ss_pred C-CcEEEeCCHHHHHHHHHc
Confidence 1 138899999888776654
No 463
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=34.10 E-value=30 Score=33.74 Aligned_cols=31 Identities=29% Similarity=0.263 Sum_probs=26.7
Q ss_pred CCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 305 PsNPtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
+..-.|...|++++++.||++|+.||+|-+.
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred cccccchhhhhhhhhhccccccceEEEeeec
Confidence 3444788889999999999999999999874
No 464
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=33.29 E-value=1.6e+02 Score=26.27 Aligned_cols=61 Identities=11% Similarity=0.180 Sum_probs=41.8
Q ss_pred HHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc
Q 012321 263 RIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (466)
Q Consensus 263 ~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~ 325 (466)
..++...++..|.++.+.-. ..++++.+++.+.++++|.+..-.. .....++++.+.+++.
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccc--cCHHHHHHHHHHHHhc
Confidence 34455567788999988754 3578888777666689999854442 3344677777777776
No 465
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=33.14 E-value=2.2e+02 Score=27.73 Aligned_cols=77 Identities=13% Similarity=0.106 Sum_probs=44.2
Q ss_pred HHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccC----CC-ceEEEEeCCCCCCcccccHH
Q 012321 242 LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN----NN-VSLFFTESPTNPFLRCVDVK 316 (466)
Q Consensus 242 l~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~----~~-tklV~lesPsNPtG~v~dl~ 316 (466)
+..|++.|-+|.+..-.-.. ....++++...|..|++.|.++++. .. ...|++..|..+ .......
T Consensus 16 v~~L~~~g~~V~~~~R~~~~--------~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-~~~~~~~ 86 (285)
T TIGR03649 16 ARLLQAASVPFLVASRSSSS--------SAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP-DLAPPMI 86 (285)
T ss_pred HHHHHhCCCcEEEEeCCCcc--------ccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC-ChhHHHH
Confidence 34566677666543221111 1123555555677888999888731 12 566776666432 2233456
Q ss_pred HHHHHHHhcCC
Q 012321 317 LVSDLCHKKGA 327 (466)
Q Consensus 317 ~I~ela~~~gi 327 (466)
.+.+.|++.|+
T Consensus 87 ~~i~aa~~~gv 97 (285)
T TIGR03649 87 KFIDFARSKGV 97 (285)
T ss_pred HHHHHHHHcCC
Confidence 78888888886
No 466
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=33.11 E-value=3.7e+02 Score=28.88 Aligned_cols=84 Identities=15% Similarity=0.189 Sum_probs=52.7
Q ss_pred hccCCCEEEEcCCCccchHHHHHhhcccCCcE---EEEeCCCCHHHHHHhccCCCceEEEEeCCC---CCC-----cccc
Q 012321 245 LVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT---ATVIDPADMEGLEAALNNNNVSLFFTESPT---NPF-----LRCV 313 (466)
Q Consensus 245 ll~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~---v~~vd~~D~e~Le~ai~~~~tklV~lesPs---NPt-----G~v~ 313 (466)
+.+.+ +|++....-.. ..++.-+.++|+. +......++|++.+.+++.+++++++.+.. ++. |.+.
T Consensus 117 lA~~~-~vLYVsGEES~--~QiklRA~RL~~~~~~l~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVs 193 (456)
T COG1066 117 LAKRG-KVLYVSGEESL--QQIKLRADRLGLPTNNLYLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVS 193 (456)
T ss_pred HHhcC-cEEEEeCCcCH--HHHHHHHHHhCCCccceEEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHH
Confidence 44555 66655443332 2233334555542 333345689999999987779999998875 232 5554
Q ss_pred cH----HHHHHHHHhcCCEEEE
Q 012321 314 DV----KLVSDLCHKKGAIVCI 331 (466)
Q Consensus 314 dl----~~I~ela~~~gillIv 331 (466)
.+ .+|.++||++|+.+++
T Consensus 194 QVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 194 QVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHHHHHHHHHHHcCCeEEE
Confidence 33 4788999999987655
No 467
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=32.56 E-value=4e+02 Score=26.58 Aligned_cols=42 Identities=14% Similarity=0.074 Sum_probs=29.6
Q ss_pred ceEEEEeC----CCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC
Q 012321 297 VSLFFTES----PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 297 tklV~les----PsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~ 338 (466)
..+++++. .+|..-...|+..|..+-+..+.++++|..++.+
T Consensus 163 ~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 163 ENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 46666664 3344444567888887777779999999888765
No 468
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=32.18 E-value=1.3e+02 Score=29.52 Aligned_cols=40 Identities=15% Similarity=0.232 Sum_probs=25.8
Q ss_pred CCCceEEEEeCCCCCC-----c--ccc----c----HHHHHHHHHhcCCEEEEeC
Q 012321 294 NNNVSLFFTESPTNPF-----L--RCV----D----VKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 294 ~~~tklV~lesPsNPt-----G--~v~----d----l~~I~ela~~~gillIvD~ 333 (466)
+.++++|++.+...+. | ... . +..|..+|+++++.+++=|
T Consensus 131 ~~~ikLIVIDSIaalfr~e~~~~~~~~~R~~~L~~~~~~L~~lA~~~~iaVvvTN 185 (256)
T PF08423_consen 131 ESKIKLIVIDSIAALFRSEFSGRGDLAERQRMLARLARILKRLARKYNIAVVVTN 185 (256)
T ss_dssp HSCEEEEEEETSSHHHHHHSGSTTTHHHHHHHHHHHHHHHHHHHHHTT-EEEEEE
T ss_pred ccceEEEEecchHHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHhCCceEEeec
Confidence 3469999999998653 1 111 1 2347778899998777655
No 469
>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.
Probab=32.06 E-value=2e+02 Score=30.34 Aligned_cols=84 Identities=19% Similarity=0.128 Sum_probs=53.4
Q ss_pred HHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc-----cHHHHHHHHHhc--CCEEEEeCCCCCC
Q 012321 266 IETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKK--GAIVCIDGTFATP 338 (466)
Q Consensus 266 ~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~-----dl~~I~ela~~~--gillIvD~t~a~~ 338 (466)
++.+.+..++++..-...+.++.+.+++.. .+.|++. |.-|+.. .++.|.++.+.. .+.|++|.-.-.+
T Consensus 245 i~~lr~~~~~pvivKgV~~~~dA~~a~~~G-~d~I~vs---nhGGr~~d~~~~t~~~L~ei~~~~~~~~~vi~dGGIr~G 320 (383)
T cd03332 245 LAFLREWTDLPIVLKGILHPDDARRAVEAG-VDGVVVS---NHGGRQVDGSIAALDALPEIVEAVGDRLTVLFDSGVRTG 320 (383)
T ss_pred HHHHHHhcCCCEEEecCCCHHHHHHHHHCC-CCEEEEc---CCCCcCCCCCcCHHHHHHHHHHHhcCCCeEEEeCCcCcH
Confidence 333334445555544456788888888764 8899984 4445443 466777776654 4899999875544
Q ss_pred C-ccchhccCCcEEEe
Q 012321 339 L-NQKALSLGADLVLH 353 (466)
Q Consensus 339 ~-~~~pl~~gaDivv~ 353 (466)
. ..+.+.+|+|.|..
T Consensus 321 ~Dv~KALaLGA~~v~i 336 (383)
T cd03332 321 ADIMKALALGAKAVLI 336 (383)
T ss_pred HHHHHHHHcCCCEEEE
Confidence 3 24666778886653
No 470
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length. The function of this family is unknown.
Probab=31.90 E-value=4.6e+02 Score=25.53 Aligned_cols=120 Identities=18% Similarity=0.194 Sum_probs=65.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEe-CCHH-HHHHHHHH-HhccCCCEEEEcCCCccchHHHHHhhcccCCcE--EEEeCC
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIM-ASGM-SASTVMLL-ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDP 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~-~SG~-aAi~~al~-all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~--v~~vd~ 282 (466)
..|...+|-.+||.=.++.-.+.. ++|. .+..++|. +--+.|.++++--|....-. .....+...|.. +.++-.
T Consensus 25 ~ep~~aEfISAlAAG~nAkliVe~~s~g~~~~ttiaLaaAAr~TgGR~vCIvp~~~~~~-~~~~~l~~~~~~~~vEfvvg 103 (218)
T PF07279_consen 25 KEPGVAEFISALAAGWNAKLIVEAWSSGGAISTTIALAAAARQTGGRHVCIVPDEQSLS-EYKKALGEAGLSDVVEFVVG 103 (218)
T ss_pred CCCCHHHHHHHHhccccceEEEEEecCCCchHhHHHHHHHHHhcCCeEEEEcCChhhHH-HHHHHHhhccccccceEEec
Confidence 357677776666663333333333 3443 22222222 23456777777666665422 233444444543 333334
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCcccccHH-HHHHHHHh--cCCEEEEeCCCC
Q 012321 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK-LVSDLCHK--KGAIVCIDGTFA 336 (466)
Q Consensus 283 ~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~-~I~ela~~--~gillIvD~t~a 336 (466)
...+++...+.. ...+++.. +.-|.. ++.++++- +|.+||.+|++.
T Consensus 104 ~~~e~~~~~~~~--iDF~vVDc------~~~d~~~~vl~~~~~~~~GaVVV~~Na~~ 152 (218)
T PF07279_consen 104 EAPEEVMPGLKG--IDFVVVDC------KREDFAARVLRAAKLSPRGAVVVCYNAFS 152 (218)
T ss_pred CCHHHHHhhccC--CCEEEEeC------CchhHHHHHHHHhccCCCceEEEEecccc
Confidence 446666666643 67777733 234555 66666653 789999999976
No 471
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=31.82 E-value=89 Score=26.08 Aligned_cols=10 Identities=20% Similarity=0.414 Sum_probs=5.8
Q ss_pred ceEEEEeCCC
Q 012321 297 VSLFFTESPT 306 (466)
Q Consensus 297 tklV~lesPs 306 (466)
+.+|++++|+
T Consensus 63 ~D~V~I~tp~ 72 (120)
T PF01408_consen 63 VDAVIIATPP 72 (120)
T ss_dssp ESEEEEESSG
T ss_pred CCEEEEecCC
Confidence 5566665555
No 472
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=31.72 E-value=2.6e+02 Score=30.32 Aligned_cols=113 Identities=19% Similarity=0.124 Sum_probs=66.0
Q ss_pred HHHHHHhccCCCEEEEcCCCccchHHHHH---hhcccC-CcEEEEeCCCCHHHHHHhccCCCceEEEE-------eCCCC
Q 012321 239 TVMLLALVPAGGHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFT-------ESPTN 307 (466)
Q Consensus 239 ~~al~all~pGD~VLv~~~~y~~t~~~~~---~~l~~~-gi~v~~vd~~D~e~Le~ai~~~~tklV~l-------esPsN 307 (466)
...+..|+..|-.+|+.+..|+-....++ .+-..+ ++.+..-...+.+..+.+++.. ...|-+ |+-..
T Consensus 227 ~~ra~~Lv~aGVd~i~~D~a~g~~~~~~~~i~~i~~~~~~~~vi~g~~~t~~~~~~l~~~G-~d~i~vg~g~Gs~~ttr~ 305 (475)
T TIGR01303 227 GGKAKALLDAGVDVLVIDTAHGHQVKMISAIKAVRALDLGVPIVAGNVVSAEGVRDLLEAG-ANIIKVGVGPGAMCTTRM 305 (475)
T ss_pred HHHHHHHHHhCCCEEEEeCCCCCcHHHHHHHHHHHHHCCCCeEEEeccCCHHHHHHHHHhC-CCEEEECCcCCccccCcc
Confidence 34456677788777777777765433322 222222 4555433356788888777653 555541 22223
Q ss_pred CCcccc----cHHHHHHHHHhcCCEEEEeCCCCCC-CccchhccCCcEEE
Q 012321 308 PFLRCV----DVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 308 PtG~v~----dl~~I~ela~~~gillIvD~t~a~~-~~~~pl~~gaDivv 352 (466)
.+|.-. .+-++++.++++++.+|.|.-.-.+ -..+.+..|+|.|+
T Consensus 306 ~~~~g~~~~~a~~~~~~~~~~~~~~viadGgi~~~~di~kala~GA~~vm 355 (475)
T TIGR01303 306 MTGVGRPQFSAVLECAAEARKLGGHVWADGGVRHPRDVALALAAGASNVM 355 (475)
T ss_pred ccCCCCchHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCCEEe
Confidence 333222 2445666678889999999875443 34567778888665
No 473
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=31.67 E-value=2.9e+02 Score=22.83 Aligned_cols=44 Identities=20% Similarity=0.268 Sum_probs=33.7
Q ss_pred HHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEe
Q 012321 285 MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 285 ~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD 332 (466)
.+.+..+++.. +-|++|-|-- ....+.++|.++++++|..+.+.
T Consensus 76 ~~~~~~~l~~g--~~v~~EKP~~--~~~~~~~~l~~~a~~~~~~~~Vg 119 (120)
T PF01408_consen 76 AEIAKKALEAG--KHVLVEKPLA--LTLEEAEELVEAAKEKGVKVMVG 119 (120)
T ss_dssp HHHHHHHHHTT--SEEEEESSSS--SSHHHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHHcC--CEEEEEcCCc--CCHHHHHHHHHHHHHhCCEEEEe
Confidence 45566667653 5899999973 45568999999999999888763
No 474
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=31.39 E-value=5.8e+02 Score=26.03 Aligned_cols=90 Identities=12% Similarity=0.252 Sum_probs=48.2
Q ss_pred ccCCCEEE-EcCCCccc-hHHHHHhhcccCCcEEEEeC-CCCH-----HHHHHhccCCCceEEEEeCCCCCCcc---ccc
Q 012321 246 VPAGGHIV-TTTDCYRK-TRIFIETVLPKMGITATVID-PADM-----EGLEAALNNNNVSLFFTESPTNPFLR---CVD 314 (466)
Q Consensus 246 l~pGD~VL-v~~~~y~~-t~~~~~~~l~~~gi~v~~vd-~~D~-----e~Le~ai~~~~tklV~lesPsNPtG~---v~d 314 (466)
...|.+|+ +..+.|.. ....+.......++.+...+ ..|+ +.+..+..+ +..+|++++|....-. +.+
T Consensus 139 ~~~g~~V~Li~~D~~r~~a~eql~~~a~~~~i~~~~~~~~~dpa~~v~~~l~~~~~~-~~D~ViIDTaGr~~~~~~l~~e 217 (318)
T PRK10416 139 KAQGKKVLLAAGDTFRAAAIEQLQVWGERVGVPVIAQKEGADPASVAFDAIQAAKAR-GIDVLIIDTAGRLHNKTNLMEE 217 (318)
T ss_pred HhcCCeEEEEecCccchhhHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHHHhC-CCCEEEEeCCCCCcCCHHHHHH
Confidence 34555554 44455643 22223233445566655442 2243 344444444 3689999999743222 234
Q ss_pred HHHHHHHHH------hcCCEEEEeCCCC
Q 012321 315 VKLVSDLCH------KKGAIVCIDGTFA 336 (466)
Q Consensus 315 l~~I~ela~------~~gillIvD~t~a 336 (466)
++++.++++ .++.++++|.+..
T Consensus 218 L~~~~~v~~~~~~~~p~~~~LVl~a~~g 245 (318)
T PRK10416 218 LKKIKRVIKKADPDAPHEVLLVLDATTG 245 (318)
T ss_pred HHHHHHHHhhhcCCCCceEEEEEECCCC
Confidence 556665554 2467899999843
No 475
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=31.39 E-value=3e+02 Score=29.05 Aligned_cols=76 Identities=14% Similarity=0.126 Sum_probs=43.7
Q ss_pred cCCCEEEEcCCCccchH-----HHHHhhcccCCcEEEE-eC---CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHH
Q 012321 247 PAGGHIVTTTDCYRKTR-----IFIETVLPKMGITATV-ID---PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKL 317 (466)
Q Consensus 247 ~pGD~VLv~~~~y~~t~-----~~~~~~l~~~gi~v~~-vd---~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~ 317 (466)
++||.|+.+.+..++.. ..++..+.+.|+++.. +. ..+.++|...++.-+++.++- . .|.-..+..
T Consensus 317 ~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ip---v--Hge~~~~~~ 391 (422)
T TIGR00649 317 RKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIP---V--HGEYRMLIN 391 (422)
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEe---c--CCcHHHHHH
Confidence 47899998887777654 1122134456766532 11 235566666554323555542 2 266666778
Q ss_pred HHHHHHhcCC
Q 012321 318 VSDLCHKKGA 327 (466)
Q Consensus 318 I~ela~~~gi 327 (466)
.++++++.|+
T Consensus 392 ~~~~a~~~g~ 401 (422)
T TIGR00649 392 HTKLAEEEGY 401 (422)
T ss_pred HHHHHHHcCC
Confidence 8888887775
No 476
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=30.97 E-value=1.9e+02 Score=32.41 Aligned_cols=123 Identities=17% Similarity=0.256 Sum_probs=62.8
Q ss_pred cCCCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
|...-....+.++..++. .+..+++++|. =.+-.-+-+++.+|=.+|+++ .-.=....+ ..+...|+...+++.
T Consensus 15 y~~FR~gQ~evI~~~l~g---~d~lvvmPTGgGKSlCyQiPAll~~G~TLVVSP-LiSLM~DQV-~~l~~~Gi~A~~lnS 89 (590)
T COG0514 15 YASFRPGQQEIIDALLSG---KDTLVVMPTGGGKSLCYQIPALLLEGLTLVVSP-LISLMKDQV-DQLEAAGIRAAYLNS 89 (590)
T ss_pred ccccCCCHHHHHHHHHcC---CcEEEEccCCCCcchHhhhHHHhcCCCEEEECc-hHHHHHHHH-HHHHHcCceeehhhc
Confidence 444433333444443332 34444455554 334444567778897777643 221111222 236677888877764
Q ss_pred C-C---HHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 283 A-D---MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 283 ~-D---~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
. + ...+...+.....+++|+ +|- ......+-+..+ +-.=.++++||++.
T Consensus 90 ~l~~~e~~~v~~~l~~g~~klLyi-sPE--rl~~~~f~~~L~--~~~i~l~vIDEAHC 142 (590)
T COG0514 90 TLSREERQQVLNQLKSGQLKLLYI-SPE--RLMSPRFLELLK--RLPISLVAIDEAHC 142 (590)
T ss_pred ccCHHHHHHHHHHHhcCceeEEEE-Cch--hhcChHHHHHHH--hCCCceEEechHHH
Confidence 3 3 334555554445899998 553 111112222222 33457899999964
No 477
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=30.50 E-value=1.6e+02 Score=26.09 Aligned_cols=63 Identities=13% Similarity=0.181 Sum_probs=42.1
Q ss_pred HHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCC
Q 012321 263 RIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 263 ~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gi 327 (466)
..++...++..|+++...-. ..+|++.++..++++.+|-+++-. +.....++++.+.+++.|+
T Consensus 16 kniv~~~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 16 NKILDHAFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cCCHHHHHHHHHHHHHCCC
Confidence 34555667888999876643 246776665555568888884443 3444568889998888753
No 478
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase. This model describes a rather tightly conserved cluster of IMP dehydrogenase sequences, many of which are characterized. The model excludes two related families of proteins proposed also to be IMP dehydrogenases, but without characterized members. These are related families are the subject of separate models.
Probab=30.31 E-value=2.1e+02 Score=30.65 Aligned_cols=108 Identities=21% Similarity=0.195 Sum_probs=64.6
Q ss_pred HhccCCCEEEEcCCCccchHHHH---HhhcccC-CcEEEEeCCCCHHHHHHhccCCCceEEEEe-CCCC--CC------c
Q 012321 244 ALVPAGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN--PF------L 310 (466)
Q Consensus 244 all~pGD~VLv~~~~y~~t~~~~---~~~l~~~-gi~v~~vd~~D~e~Le~ai~~~~tklV~le-sPsN--Pt------G 310 (466)
.+...|-.+|.-+..++.....+ +.+-+.+ .+.+..-+..+.++.+.+++.. ...|-+. .|.. .| |
T Consensus 231 ~L~~aG~d~I~vd~a~g~~~~~~~~i~~i~~~~~~~~vi~G~v~t~~~a~~l~~aG-ad~i~vg~g~G~~~~t~~~~~~g 309 (450)
T TIGR01302 231 ALVKAGVDVIVIDSSHGHSIYVIDSIKEIKKTYPDLDIIAGNVATAEQAKALIDAG-ADGLRVGIGPGSICTTRIVAGVG 309 (450)
T ss_pred HHHHhCCCEEEEECCCCcHhHHHHHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHhC-CCEEEECCCCCcCCccceecCCC
Confidence 56667766666676666543333 2222222 3444433566788888888754 6777653 2321 11 1
Q ss_pred c--cccHHHHHHHHHhcCCEEEEeCCCCCC-CccchhccCCcEEE
Q 012321 311 R--CVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 311 ~--v~dl~~I~ela~~~gillIvD~t~a~~-~~~~pl~~gaDivv 352 (466)
. +..+.++.+.++++++.+|.|.-.-++ -..+.+..|+|.|+
T Consensus 310 ~p~~~~i~~~~~~~~~~~vpviadGGi~~~~di~kAla~GA~~V~ 354 (450)
T TIGR01302 310 VPQITAVYDVAEYAAQSGIPVIADGGIRYSGDIVKALAAGADAVM 354 (450)
T ss_pred ccHHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 1 112456777788899999999865544 33577888999776
No 479
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=30.17 E-value=5.4e+02 Score=26.04 Aligned_cols=105 Identities=10% Similarity=0.090 Sum_probs=53.1
Q ss_pred hhhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEcC--CCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCC
Q 012321 221 ALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNN 296 (466)
Q Consensus 221 ~l~g~e~~v~~~SG~aAi~~al~all~pGD--~VLv~~--~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~ 296 (466)
++....+.|++-+-+..+...+....+.|. +|++.+ |.+.+ +.+. ..+...|++++++... .+-..+.+
T Consensus 111 ~~i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G-~~~a-~~L~~~gI~vtlI~Ds---a~~~~m~~-- 183 (301)
T TIGR00511 111 KRIRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQG-HITA-KELRDYGIPVTLIVDS---AVRYFMKE-- 183 (301)
T ss_pred HHcCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchH-HHHH-HHHHHCCCCEEEEehh---HHHHHHHh--
Confidence 333334455554434333344444444443 455543 44444 3333 4466779999887432 23333332
Q ss_pred ceEEEEeCCC-CCCccccc---HHHHHHHHHhcCCEEEEe
Q 012321 297 VSLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 297 tklV~lesPs-NPtG~v~d---l~~I~ela~~~gillIvD 332 (466)
+..|++-.=. -..|.+.. --.++-.||.+++++++=
T Consensus 184 vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 184 VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 4555552111 12344443 246777889999887764
No 480
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=29.98 E-value=4.8e+02 Score=25.42 Aligned_cols=81 Identities=14% Similarity=0.230 Sum_probs=44.9
Q ss_pred cccCCcEEE--EeCCCCHHHHHHhccCCCceEEEEeCCCCCC--ccccc------HHHHHHHHHhcC--CEEEEeCCCCC
Q 012321 270 LPKMGITAT--VIDPADMEGLEAALNNNNVSLFFTESPTNPF--LRCVD------VKLVSDLCHKKG--AIVCIDGTFAT 337 (466)
Q Consensus 270 l~~~gi~v~--~vd~~D~e~Le~ai~~~~tklV~lesPsNPt--G~v~d------l~~I~ela~~~g--illIvD~t~a~ 337 (466)
.+..|++.- .-+.++++.++..+.. +.+|.+-+. ||- |.-.- ++++.++.+++| +.+-+|.-...
T Consensus 104 Ik~~G~kaGlalnP~T~~~~l~~~l~~--vD~VLvMsV-~PGf~GQ~fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~ 180 (229)
T PRK09722 104 IRRAGMKVGLVLNPETPVESIKYYIHL--LDKITVMTV-DPGFAGQPFIPEMLDKIAELKALRERNGLEYLIEVDGSCNQ 180 (229)
T ss_pred HHHcCCCEEEEeCCCCCHHHHHHHHHh--cCEEEEEEE-cCCCcchhccHHHHHHHHHHHHHHHhcCCCeEEEEECCCCH
Confidence 444555432 2345678888888864 455555443 342 43331 344455555554 77999975432
Q ss_pred CCccchhccCCcEEEe
Q 012321 338 PLNQKALSLGADLVLH 353 (466)
Q Consensus 338 ~~~~~pl~~gaDivv~ 353 (466)
.-.....+.|+|+++.
T Consensus 181 ~~i~~~~~aGad~~V~ 196 (229)
T PRK09722 181 KTYEKLMEAGADVFIV 196 (229)
T ss_pred HHHHHHHHcCCCEEEE
Confidence 2223445679998873
No 481
>PRK04296 thymidine kinase; Provisional
Probab=29.98 E-value=1.9e+02 Score=26.95 Aligned_cols=90 Identities=10% Similarity=0.116 Sum_probs=45.8
Q ss_pred HHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhcc--CCCceEEEEeCCCCCCcccccHHHHH
Q 012321 242 LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALN--NNNVSLFFTESPTNPFLRCVDVKLVS 319 (466)
Q Consensus 242 l~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~--~~~tklV~lesPsNPtG~v~dl~~I~ 319 (466)
+..+...|.+|++..+.+.... .........|+++........+++.+.+. ..+..+|++..... ....++.++.
T Consensus 23 ~~~~~~~g~~v~i~k~~~d~~~-~~~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~dvviIDEaq~--l~~~~v~~l~ 99 (190)
T PRK04296 23 AYNYEERGMKVLVFKPAIDDRY-GEGKVVSRIGLSREAIPVSSDTDIFELIEEEGEKIDCVLIDEAQF--LDKEQVVQLA 99 (190)
T ss_pred HHHHHHcCCeEEEEeccccccc-cCCcEecCCCCcccceEeCChHHHHHHHHhhCCCCCEEEEEcccc--CCHHHHHHHH
Confidence 3344456888887655332211 12234555565543222223344433332 22367899977752 1111255667
Q ss_pred HHHHhcCCEEEEeCC
Q 012321 320 DLCHKKGAIVCIDGT 334 (466)
Q Consensus 320 ela~~~gillIvD~t 334 (466)
+.++..|+.+++=.-
T Consensus 100 ~~l~~~g~~vi~tgl 114 (190)
T PRK04296 100 EVLDDLGIPVICYGL 114 (190)
T ss_pred HHHHHcCCeEEEEec
Confidence 777778887777543
No 482
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=29.85 E-value=47 Score=35.84 Aligned_cols=30 Identities=17% Similarity=0.140 Sum_probs=26.7
Q ss_pred CCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 306 sNPtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
....|...|++++++.||++|+.||+|-++
T Consensus 74 d~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 444788999999999999999999999984
No 483
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=29.78 E-value=2.3e+02 Score=31.27 Aligned_cols=108 Identities=17% Similarity=0.185 Sum_probs=60.5
Q ss_pred CCcEEEeCCHH-HH-HHHHHHHhccCCCE----EEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCce
Q 012321 225 AESTVIMASGM-SA-STVMLLALVPAGGH----IVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVS 298 (466)
Q Consensus 225 ~e~~v~~~SG~-aA-i~~al~all~pGD~----VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tk 298 (466)
.+-++++++|. ++ |..++....+.... |-.....+. -..+....++.+|.+.+.+ ....+++.+++.+ -
T Consensus 231 vpvg~~lSGGlDSS~Iaa~a~~~~~~~~~~~fsvg~~~~~~~-D~~~a~~~A~~lg~~h~~~-~~~~~e~~~~~~~---v 305 (542)
T COG0367 231 VPVGVFLSGGLDSSLIAAIAAEELGKEGKTTFTVGFEDSDSP-DAKYARAVAKFLGTPHHEI-ILTNEELLNALPE---V 305 (542)
T ss_pred CcEEEEeCCCccHHHHHHHHHHhccccceeeeEeecCCCCCc-hHHHHHHHHHHhCCCcEEE-eecHHHHHHHHHH---H
Confidence 35678888887 44 44333333333222 222222221 2333444555566533322 2346777777643 2
Q ss_pred EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE-----eCCCCCC
Q 012321 299 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-----DGTFATP 338 (466)
Q Consensus 299 lV~lesPsNPtG~v~dl~~I~ela~~~gillIv-----D~t~a~~ 338 (466)
+..++.|.. .....++--+++.+++++..++. ||.|+..
T Consensus 306 v~~~~~p~~-~~~~~ply~~~~~a~~~g~kVvLSGeGADElFgGY 349 (542)
T COG0367 306 VKALDTPGG-MAASIPLYLLSRKARAEGEKVVLSGEGADELFGGY 349 (542)
T ss_pred HhhcCCCCc-ccchhHHHHHHHhhhhcCcEEeecCccHHHHhcCC
Confidence 455667775 66667888999999999988887 5556543
No 484
>cd00150 PlantTI Plant trypsin inhibitors such as squash trypsin inhibitor. Plant proteinase inhibitors play important roles in natural plant defense. Proteinase inhibitors from squash seeds form an uniform family of small proteins cross-linked with three disulfide bridges.
Probab=29.71 E-value=24 Score=22.58 Aligned_cols=15 Identities=40% Similarity=0.815 Sum_probs=12.5
Q ss_pred ccccccccCCCCcccccCCCCCC
Q 012321 8 SQKILSFSSSCSSFECRSDPDFS 30 (466)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~ 30 (466)
|||++ .+|..|.|-.
T Consensus 1 CPrIl--------m~Ck~DsDCl 15 (27)
T cd00150 1 CPRIL--------MECKRDSDCL 15 (27)
T ss_pred Ccchh--------eecccccccc
Confidence 78998 8999998853
No 485
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=29.67 E-value=2.2e+02 Score=27.22 Aligned_cols=81 Identities=15% Similarity=0.104 Sum_probs=42.0
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh---cC--CEEEEeCCCCCCCccchhccCCcEEEeccccccc
Q 012321 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIG 360 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~---~g--illIvD~t~a~~~~~~pl~~gaDivv~S~sK~lg 360 (466)
+.|+++-++.+++.|++. .+.|.|...++++|.+..++ .+ ++.++|.+...++ .+...+|.++-+-+-.++
T Consensus 36 ~~l~~a~~d~~ik~vvL~-~~s~gg~~~~~~el~~~i~~~~~~~kpVia~~~~~~sggy---~lasaad~I~a~p~~~vg 111 (222)
T cd07018 36 EALEKAAEDDRIKGIVLD-LDGLSGGLAKLEELRQALERFRASGKPVIAYADGYSQGQY---YLASAADEIYLNPSGSVE 111 (222)
T ss_pred HHHHHHhcCCCeEEEEEE-CCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCCchhh---hhhhhCCEEEECCCceEE
Confidence 344444444458999884 45578877787777765532 33 4444453222222 223346655554443333
Q ss_pred cccCceEEEEEeChH
Q 012321 361 GHNDVLAGSISGSGK 375 (466)
Q Consensus 361 G~gdv~gG~vvg~~e 375 (466)
. .|++.....
T Consensus 112 ~-----iGv~~~~~~ 121 (222)
T cd07018 112 L-----TGLSAETLF 121 (222)
T ss_pred e-----eccchhhhh
Confidence 2 355544443
No 486
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=29.54 E-value=4.7e+02 Score=25.37 Aligned_cols=109 Identities=10% Similarity=0.010 Sum_probs=52.8
Q ss_pred HHHhccCC-CEEEEcCCCcc--chHHHHHhhcccCCcEEEE-eC-CCCHHHHHHhccCCCceEEEEeCCCCCCcccc--c
Q 012321 242 LLALVPAG-GHIVTTTDCYR--KTRIFIETVLPKMGITATV-ID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCV--D 314 (466)
Q Consensus 242 l~all~pG-D~VLv~~~~y~--~t~~~~~~~l~~~gi~v~~-vd-~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~--d 314 (466)
+..+...| |.|++++-.|. ....-+...+++.|++... +. ..+.+.++..+..- ..++|+ +.++-+|... +
T Consensus 94 i~~~~~~Gadgvii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~-~~~l~m-sv~~~~g~~~~~~ 171 (244)
T PRK13125 94 LNMARDVGADGVLFPDLLIDYPDDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLS-PLFIYY-GLRPATGVPLPVS 171 (244)
T ss_pred HHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhC-CCEEEE-EeCCCCCCCchHH
Confidence 33444445 67777653332 1111122445677876543 33 34577888777653 455655 5555566533 3
Q ss_pred HHHHHHHHHhc--CCEEEEeCCCCCCCccch-hccCCcEEE
Q 012321 315 VKLVSDLCHKK--GAIVCIDGTFATPLNQKA-LSLGADLVL 352 (466)
Q Consensus 315 l~~I~ela~~~--gillIvD~t~a~~~~~~p-l~~gaDivv 352 (466)
+.+..+.+++. +..+++|.-..++-..+. ...|+|.++
T Consensus 172 ~~~~i~~lr~~~~~~~i~v~gGI~~~e~i~~~~~~gaD~vv 212 (244)
T PRK13125 172 VERNIKRVRNLVGNKYLVVGFGLDSPEDARDALSAGADGVV 212 (244)
T ss_pred HHHHHHHHHHhcCCCCEEEeCCcCCHHHHHHHHHcCCCEEE
Confidence 33333333432 355777754322212222 345666433
No 487
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=29.20 E-value=1.7e+02 Score=26.12 Aligned_cols=68 Identities=13% Similarity=0.178 Sum_probs=44.8
Q ss_pred CccchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCC
Q 012321 258 CYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 258 ~y~~t~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gi 327 (466)
.|.--...+...++..|.++...-. ..+|++.++..+.++.+|-+++-. +.....++++.+.+++.|.
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~--~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLY--GHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--ccCHHHHHHHHHHHHHCCC
Confidence 3433344555678888999877643 356777666655568888884444 3344468899999988763
No 488
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=29.09 E-value=1.2e+02 Score=30.31 Aligned_cols=84 Identities=13% Similarity=0.242 Sum_probs=49.6
Q ss_pred ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC--CCCHHHHHHhccC--CCceEEEEeCCCCCCccccc-HHHHHH
Q 012321 246 VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--PADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD-VKLVSD 320 (466)
Q Consensus 246 l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd--~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d-l~~I~e 320 (466)
+.-||+||.-+-.-. ...++...+...|+++..+. .+|+++|.+.++. .+..+|+++- -.|-..| +-+ -.
T Consensus 7 I~vG~ElL~G~ivdt-Na~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~r~D~vI~tG---GLGPT~DDiT~-e~ 81 (255)
T COG1058 7 IAVGDELLSGRIVDT-NAAFLADELTELGVDLARITTVGDNPDRIVEALREASERADVVITTG---GLGPTHDDLTA-EA 81 (255)
T ss_pred EEEccceecCceecc-hHHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHHhCCCEEEECC---CcCCCccHhHH-HH
Confidence 345788876554332 34456667778899877653 5677777766632 1378888722 2344333 322 22
Q ss_pred HHHhcCCEEEEeCC
Q 012321 321 LCHKKGAIVCIDGT 334 (466)
Q Consensus 321 la~~~gillIvD~t 334 (466)
+|+..|..++.|+.
T Consensus 82 vAka~g~~lv~~~~ 95 (255)
T COG1058 82 VAKALGRPLVLDEE 95 (255)
T ss_pred HHHHhCCCcccCHH
Confidence 44556777888865
No 489
>PRK14974 cell division protein FtsY; Provisional
Probab=28.85 E-value=5.6e+02 Score=26.44 Aligned_cols=99 Identities=13% Similarity=0.147 Sum_probs=52.4
Q ss_pred HHHHHHHHhccCCCEE-EEcCCCcc-chHHHHHhhcccCCcEEEEeC-CCCHHH-----HHHhccCCCceEEEEeCCCCC
Q 012321 237 ASTVMLLALVPAGGHI-VTTTDCYR-KTRIFIETVLPKMGITATVID-PADMEG-----LEAALNNNNVSLFFTESPTNP 308 (466)
Q Consensus 237 Ai~~al~all~pGD~V-Lv~~~~y~-~t~~~~~~~l~~~gi~v~~vd-~~D~e~-----Le~ai~~~~tklV~lesPsNP 308 (466)
.+..+...+...|-+| ++....|. +....+.......|+.+.... ..|+.. ++.+-.. ...+|+++++...
T Consensus 156 tiakLA~~l~~~g~~V~li~~Dt~R~~a~eqL~~~a~~lgv~v~~~~~g~dp~~v~~~ai~~~~~~-~~DvVLIDTaGr~ 234 (336)
T PRK14974 156 TIAKLAYYLKKNGFSVVIAAGDTFRAGAIEQLEEHAERLGVKVIKHKYGADPAAVAYDAIEHAKAR-GIDVVLIDTAGRM 234 (336)
T ss_pred HHHHHHHHHHHcCCeEEEecCCcCcHHHHHHHHHHHHHcCCceecccCCCCHHHHHHHHHHHHHhC-CCCEEEEECCCcc
Confidence 3433444455566555 45455563 333445455666777654322 234332 2222222 2569999999744
Q ss_pred Cc---ccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 309 FL---RCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 309 tG---~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
.. .+..++.+.+.+....+++|+|.+.+
T Consensus 235 ~~~~~lm~eL~~i~~~~~pd~~iLVl~a~~g 265 (336)
T PRK14974 235 HTDANLMDELKKIVRVTKPDLVIFVGDALAG 265 (336)
T ss_pred CCcHHHHHHHHHHHHhhCCceEEEeeccccc
Confidence 32 22345555555555677888888643
No 490
>TIGR02238 recomb_DMC1 meiotic recombinase Dmc1. This model describes DMC1, a subfamily of a larger family of DNA repair and recombination proteins. It is eukaryotic only and most closely related to eukaryotic RAD51. It also resembles archaeal RadA (TIGR02236) and RadB (TIGR02237) and bacterial RecA (TIGR02012). It has been characterized for human as a recombinase active only in meiosis.
Probab=28.58 E-value=4e+02 Score=27.12 Aligned_cols=43 Identities=9% Similarity=0.175 Sum_probs=26.5
Q ss_pred hccCCCceEEEEeCCCCCCcc-------ccc--------HHHHHHHHHhcCCEEEEeC
Q 012321 291 ALNNNNVSLFFTESPTNPFLR-------CVD--------VKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~-------v~d--------l~~I~ela~~~gillIvD~ 333 (466)
.+.+.++++|++.+.++..-. +.+ +..|..+++++|+.+++=|
T Consensus 186 ~i~~~~~~LvVIDSisal~r~~~~~~g~~~~r~~~l~~~~~~L~~la~~~~vavvitN 243 (313)
T TIGR02238 186 KFSEEPFRLLIVDSIMALFRVDFSGRGELSERQQKLAQMLSRLNKISEEFNVAVFVTN 243 (313)
T ss_pred HhhccCCCEEEEEcchHhhhhhccCccchHHHHHHHHHHHHHHHHHHHHcCcEEEEEC
Confidence 344445899999988754211 111 2347778888998776643
No 491
>PLN00191 enolase
Probab=28.56 E-value=3.4e+02 Score=29.40 Aligned_cols=98 Identities=8% Similarity=-0.003 Sum_probs=62.8
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--CCHHHHHHhccCCCceEEEEeCCCCCCc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--~D~e~Le~ai~~~~tklV~lesPsNPtG 310 (466)
+..+++.. +..++.+=+-+.+.+|.....+..+..+-+...+.+.--|. .+++.+++.++..-..+|.+ - .|..|
T Consensus 296 s~~e~i~~-~~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~i-K-l~qiG 372 (457)
T PLN00191 296 SGDELIDL-YKEFVSDYPIVSIEDPFDQDDWEHWAKLTSLEDVQIVGDDLLVTNPKRVAKAIQEKACNALLL-K-VNQIG 372 (457)
T ss_pred CHHHHHHH-HHHHhhcCCcEEEECCCCcccHHHHHHHHccCCCcEEccCcccCCHHHHHHHHHhCCCCEEEe-c-ccccC
Confidence 33344433 34455544566788888766555555544444444432232 46888888887654556655 2 34678
Q ss_pred ccccHHHHHHHHHhcCCEEEEeC
Q 012321 311 RCVDVKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 311 ~v~dl~~I~ela~~~gillIvD~ 333 (466)
.+.+..+++++|+++|+.+++-.
T Consensus 373 GITea~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 373 TVTESIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred CHHHHHHHHHHHHHCCCEEEeCC
Confidence 89999999999999999988754
No 492
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=28.55 E-value=5.1e+02 Score=24.51 Aligned_cols=93 Identities=16% Similarity=0.177 Sum_probs=53.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCC
Q 012321 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 226 e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesP 305 (466)
..++++++|..|...+ ..|++.|-+|.+.++..... +..+.....++...-+ .+.+. +.. ..+|++ .|
T Consensus 10 k~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~---l~~l~~~~~i~~~~~~-~~~~d----l~~--~~lVi~-at 77 (205)
T TIGR01470 10 RAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESE---LTLLAEQGGITWLARC-FDADI----LEG--AFLVIA-AT 77 (205)
T ss_pred CeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHH---HHHHHHcCCEEEEeCC-CCHHH----hCC--cEEEEE-CC
Confidence 5788899998776544 56778887777766655432 2222222234332211 12232 332 456665 44
Q ss_pred CCCCcccccHHHHHHHHHhcCCEE-EEeCC
Q 012321 306 TNPFLRCVDVKLVSDLCHKKGAIV-CIDGT 334 (466)
Q Consensus 306 sNPtG~v~dl~~I~ela~~~gill-IvD~t 334 (466)
+++- .-+.|.+.|++.|+++ ++|+.
T Consensus 78 ~d~~----ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 78 DDEE----LNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred CCHH----HHHHHHHHHHHcCCEEEECCCc
Confidence 4331 1268999999999877 35554
No 493
>PLN03187 meiotic recombination protein DMC1 homolog; Provisional
Probab=28.36 E-value=3.5e+02 Score=28.03 Aligned_cols=43 Identities=9% Similarity=0.192 Sum_probs=26.4
Q ss_pred hccCCCceEEEEeCCCCCCcc-------ccc--------HHHHHHHHHhcCCEEEEeC
Q 012321 291 ALNNNNVSLFFTESPTNPFLR-------CVD--------VKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~-------v~d--------l~~I~ela~~~gillIvD~ 333 (466)
.+.+.++++|++.+.+...-. +.+ +..|..+++++|+.+++=|
T Consensus 216 ~i~~~~~~LvVIDSital~r~~~~~rg~l~~rq~~L~~~~~~L~~lA~~~~vavvvTN 273 (344)
T PLN03187 216 KMAEEPFRLLIVDSVIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTN 273 (344)
T ss_pred HHHhcCCCEEEEeCcHHhhhccccCccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 343445889999888754221 111 2346777788888777654
No 494
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=28.35 E-value=2e+02 Score=24.73 Aligned_cols=45 Identities=13% Similarity=0.137 Sum_probs=30.7
Q ss_pred HHHHHhccCCCceEEEEeCCC--CCCcccccHHHHHHHHHhcCCEEEE
Q 012321 286 EGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesPs--NPtG~v~dl~~I~ela~~~gillIv 331 (466)
+++.+.|...+..+|+. +|+ .......|...|.+.|-+++++++.
T Consensus 60 ~~i~~~i~~g~i~~VIn-t~~~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 60 QQIGALIAEGEIDAVIF-FRDPLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hHHHHHHHcCceeEEEE-cCCCCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 45666676655777654 554 2233256889999999999998764
No 495
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=28.30 E-value=2.4e+02 Score=29.76 Aligned_cols=86 Identities=17% Similarity=0.246 Sum_probs=51.8
Q ss_pred CCEE-EEcCCCccc-hHHHHHhhcccCCcEEEEeCCCCHHHHHHhccC-CCceEEEEeCCCCCCcccccHHHHHHHHHhc
Q 012321 249 GGHI-VTTTDCYRK-TRIFIETVLPKMGITATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (466)
Q Consensus 249 GD~V-Lv~~~~y~~-t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~-~~tklV~lesPsNPtG~v~dl~~I~ela~~~ 325 (466)
|..| ++..++|.. ....+.......|+++.... +.+++.+.+.. .+..+|++.++.-.......+.++.++.+..
T Consensus 206 g~~V~lit~Dt~R~aa~eQL~~~a~~lgvpv~~~~--~~~~l~~~L~~~~~~DlVLIDTaGr~~~~~~~l~el~~~l~~~ 283 (388)
T PRK12723 206 SLNIKIITIDNYRIGAKKQIQTYGDIMGIPVKAIE--SFKDLKEEITQSKDFDLVLVDTIGKSPKDFMKLAEMKELLNAC 283 (388)
T ss_pred CCeEEEEeccCccHHHHHHHHHHhhcCCcceEeeC--cHHHHHHHHHHhCCCCEEEEcCCCCCccCHHHHHHHHHHHHhc
Confidence 4443 455556643 44445556677788765443 45566654432 1368999999974333333466766666542
Q ss_pred ----CCEEEEeCCCC
Q 012321 326 ----GAIVCIDGTFA 336 (466)
Q Consensus 326 ----gillIvD~t~a 336 (466)
.++||+|.+..
T Consensus 284 ~~~~e~~LVlsat~~ 298 (388)
T PRK12723 284 GRDAEFHLAVSSTTK 298 (388)
T ss_pred CCCCeEEEEEcCCCC
Confidence 57899998865
No 496
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=28.18 E-value=4.1e+02 Score=24.05 Aligned_cols=41 Identities=22% Similarity=0.119 Sum_probs=26.6
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEe
Q 012321 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLH 353 (466)
Q Consensus 309 tG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~ 353 (466)
.|...++-++++.|+++|+.+|.= +.....|+...+|+++.
T Consensus 82 sG~t~~~i~~~~~ak~~g~~ii~I----T~~~~s~la~~ad~~l~ 122 (179)
T TIGR03127 82 SGETESLVTVAKKAKEIGATVAAI----TTNPESTLGKLADVVVE 122 (179)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEE----ECCCCCchHHhCCEEEE
Confidence 477788899999999999665431 22223445545776654
No 497
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=27.76 E-value=5.1e+02 Score=25.87 Aligned_cols=74 Identities=9% Similarity=0.158 Sum_probs=42.4
Q ss_pred chHHHHHhhcccCCcEEEEeCCCCHHHHHHhcc---C-CCceEEEEeCCCCCCcccccHHHHHHHHHh---cCCEEEEeC
Q 012321 261 KTRIFIETVLPKMGITATVIDPADMEGLEAALN---N-NNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDG 333 (466)
Q Consensus 261 ~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~---~-~~tklV~lesPsNPtG~v~dl~~I~ela~~---~gillIvD~ 333 (466)
+....+.......++++.. ..+.+++.+.+. . .+..+|++.+|....-....++++.++.+. ..++|++|.
T Consensus 117 ~~~~ql~~~~~~~~~~~~~--~~~~~~l~~~l~~l~~~~~~D~ViIDt~Gr~~~~~~~l~el~~~~~~~~~~~~~LVl~a 194 (270)
T PRK06731 117 GTVQQLQDYVKTIGFEVIA--VRDEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSA 194 (270)
T ss_pred HHHHHHHHHhhhcCceEEe--cCCHHHHHHHHHHHHhcCCCCEEEEECCCCCcCCHHHHHHHHHHHhhhCCCeEEEEEcC
Confidence 4444444555566766543 345566655542 1 136899999997443223345555555443 346889998
Q ss_pred CCC
Q 012321 334 TFA 336 (466)
Q Consensus 334 t~a 336 (466)
+..
T Consensus 195 ~~~ 197 (270)
T PRK06731 195 SMK 197 (270)
T ss_pred ccC
Confidence 754
No 498
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=27.50 E-value=4.1e+02 Score=25.61 Aligned_cols=43 Identities=23% Similarity=0.217 Sum_probs=31.3
Q ss_pred CCCHHH---HHHhccCCCceEEEEeCCCCCCccc-ccHHHHHHHHHh
Q 012321 282 PADMEG---LEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHK 324 (466)
Q Consensus 282 ~~D~e~---Le~ai~~~~tklV~lesPsNPtG~v-~dl~~I~ela~~ 324 (466)
..|++. |.+++..+++.+|+-..-.|+||.- .|-..+.++|.+
T Consensus 119 vtdp~~~~ki~e~lp~r~VdvVlSDMapnaTGvr~~Dh~~~i~LC~s 165 (232)
T KOG4589|consen 119 VTDPETYRKIFEALPNRPVDVVLSDMAPNATGVRIRDHYRSIELCDS 165 (232)
T ss_pred cCCHHHHHHHHHhCCCCcccEEEeccCCCCcCcchhhHHHHHHHHHH
Confidence 345554 4445544557888888888999964 589999999976
No 499
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=27.41 E-value=52 Score=36.23 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=29.2
Q ss_pred CCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 304 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 304 sPsNPtG~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
.|....|...+++++++.||++|+-||+|-++.
T Consensus 151 ~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~N 183 (542)
T TIGR02402 151 APHNAYGGPDDLKALVDAAHGLGLGVILDVVYN 183 (542)
T ss_pred ccccccCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 566678888999999999999999999998864
No 500
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=27.21 E-value=1.2e+02 Score=25.73 Aligned_cols=39 Identities=26% Similarity=0.160 Sum_probs=26.1
Q ss_pred CcccccHHHHHHHHHhcCCEEE--EeCCCCCCCccchhccCCcEEEe
Q 012321 309 FLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLH 353 (466)
Q Consensus 309 tG~v~dl~~I~ela~~~gillI--vD~t~a~~~~~~pl~~gaDivv~ 353 (466)
.|...++-++++.++++|+.+| .|+ ...++..-+|.++.
T Consensus 56 sG~t~e~~~~~~~a~~~g~~vi~iT~~------~~s~la~~ad~~l~ 96 (126)
T cd05008 56 SGETADTLAALRLAKEKGAKTVAITNV------VGSTLAREADYVLY 96 (126)
T ss_pred CcCCHHHHHHHHHHHHcCCeEEEEECC------CCChHHHhCCEEEE
Confidence 4777889999999999986654 443 23344444666554
Done!