Query 012321
Match_columns 466
No_of_seqs 454 out of 2917
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 07:08:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012321.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012321hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ri6_A O-acetylhomoserine sulf 100.0 4.8E-54 1.6E-58 450.7 30.7 309 152-464 26-356 (430)
2 1qgn_A Protein (cystathionine 100.0 5.7E-53 2E-57 444.4 38.0 319 145-464 49-368 (445)
3 3ndn_A O-succinylhomoserine su 100.0 2.2E-52 7.4E-57 435.7 34.6 309 152-464 26-335 (414)
4 2fq6_A Cystathionine beta-lyas 100.0 2.8E-52 9.4E-57 435.3 34.4 310 152-464 25-337 (415)
5 3nmy_A Xometc, cystathionine g 100.0 1.2E-51 4.2E-56 428.2 31.8 301 152-464 19-322 (400)
6 3qhx_A Cystathionine gamma-syn 100.0 4.7E-49 1.6E-53 406.4 36.5 303 152-464 17-320 (392)
7 3acz_A Methionine gamma-lyase; 100.0 5.4E-48 1.9E-52 397.5 36.1 308 152-464 5-313 (389)
8 3cog_A Cystathionine gamma-lya 100.0 5.4E-47 1.8E-51 392.9 33.6 301 152-464 18-321 (403)
9 2ctz_A O-acetyl-L-homoserine s 100.0 2E-45 6.7E-50 382.8 32.2 309 153-464 3-346 (421)
10 1gc0_A Methionine gamma-lyase; 100.0 8.5E-45 2.9E-49 374.2 30.2 310 152-464 9-320 (398)
11 1e5e_A MGL, methionine gamma-l 100.0 2.4E-43 8.1E-48 365.2 34.6 309 152-464 7-318 (404)
12 1n8p_A Cystathionine gamma-lya 100.0 7.6E-44 2.6E-48 367.9 30.6 300 152-464 7-314 (393)
13 2cb1_A O-acetyl homoserine sul 100.0 9E-43 3.1E-47 360.9 35.3 304 153-462 3-335 (412)
14 2rfv_A Methionine gamma-lyase; 100.0 7.1E-41 2.4E-45 344.3 36.3 310 152-464 8-319 (398)
15 1cs1_A CGS, protein (cystathio 100.0 1.9E-40 6.6E-45 339.3 35.4 302 152-464 4-306 (386)
16 1ibj_A CBL, cystathionine beta 100.0 6.2E-39 2.1E-43 339.1 34.8 300 152-464 86-386 (464)
17 3i16_A Aluminum resistance pro 100.0 4.4E-35 1.5E-39 306.7 24.2 249 199-464 65-341 (427)
18 3hvy_A Cystathionine beta-lyas 100.0 4.3E-34 1.5E-38 299.2 24.5 247 199-463 66-340 (427)
19 3jzl_A Putative cystathionine 100.0 1.2E-33 4.1E-38 294.3 24.3 245 199-463 51-323 (409)
20 1pff_A Methionine gamma-lyase; 100.0 5.3E-33 1.8E-37 277.1 25.9 249 214-463 2-253 (331)
21 3ht4_A Aluminum resistance pro 100.0 9.1E-28 3.1E-32 251.4 21.2 232 208-444 63-320 (431)
22 3op7_A Aminotransferase class 99.9 2.3E-24 7.8E-29 218.0 22.9 219 209-433 62-301 (375)
23 1bs0_A Protein (8-amino-7-oxon 99.9 2.5E-23 8.6E-28 211.0 29.9 213 208-428 82-310 (384)
24 1t3i_A Probable cysteine desul 99.9 4.6E-24 1.6E-28 217.7 24.3 227 202-432 64-329 (420)
25 3cai_A Possible aminotransfera 99.9 7.2E-24 2.4E-28 216.3 23.3 227 201-431 60-326 (406)
26 3tqx_A 2-amino-3-ketobutyrate 99.9 2.8E-23 9.5E-28 210.8 26.5 213 208-427 86-318 (399)
27 1jg8_A L-ALLO-threonine aldola 99.9 1.2E-23 4.1E-28 210.1 23.3 216 208-427 36-272 (347)
28 3lvm_A Cysteine desulfurase; s 99.9 1.5E-23 5E-28 215.2 23.7 223 206-433 64-309 (423)
29 1fc4_A 2-amino-3-ketobutyrate 99.9 2.9E-23 1E-27 211.7 25.5 212 209-427 89-319 (401)
30 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 4.5E-24 1.5E-28 214.6 19.1 220 203-431 46-291 (371)
31 3dzz_A Putative pyridoxal 5'-p 99.9 1.6E-22 5.3E-27 204.8 30.3 227 201-432 57-315 (391)
32 3ffh_A Histidinol-phosphate am 99.9 8.4E-23 2.9E-27 205.6 28.0 220 204-431 61-299 (363)
33 2aeu_A Hypothetical protein MJ 99.9 7.3E-24 2.5E-28 216.7 19.9 200 211-420 59-269 (374)
34 2dr1_A PH1308 protein, 386AA l 99.9 1.1E-22 3.8E-27 205.2 27.1 215 209-427 52-300 (386)
35 3euc_A Histidinol-phosphate am 99.9 1.9E-23 6.4E-28 210.6 20.6 220 204-431 61-300 (367)
36 3get_A Histidinol-phosphate am 99.9 4.7E-23 1.6E-27 207.6 23.5 216 204-427 59-297 (365)
37 3nra_A Aspartate aminotransfer 99.9 2.9E-23 1E-27 211.5 22.0 222 205-432 77-331 (407)
38 3a2b_A Serine palmitoyltransfe 99.9 1.7E-22 6E-27 206.0 27.6 216 204-427 82-314 (398)
39 4dq6_A Putative pyridoxal phos 99.9 1.7E-22 5.7E-27 204.6 26.4 225 201-432 62-319 (391)
40 3ly1_A Putative histidinol-pho 99.9 8.8E-23 3E-27 204.4 23.9 217 204-427 45-283 (354)
41 1kmj_A Selenocysteine lyase; p 99.9 3E-23 1E-27 210.5 20.7 221 208-432 65-325 (406)
42 2z61_A Probable aspartate amin 99.9 4.1E-22 1.4E-26 201.3 28.5 208 212-427 68-296 (370)
43 2w8t_A SPT, serine palmitoyltr 99.9 1.7E-22 5.8E-27 209.3 25.8 212 208-427 107-335 (427)
44 3kki_A CAI-1 autoinducer synth 99.9 1E-22 3.4E-27 209.0 23.8 211 209-427 103-327 (409)
45 1b5p_A Protein (aspartate amin 99.9 3.4E-22 1.2E-26 203.7 27.3 210 212-427 70-310 (385)
46 1fg7_A Histidinol phosphate am 99.9 1.7E-22 5.8E-27 204.3 24.8 218 205-432 53-291 (356)
47 4hvk_A Probable cysteine desul 99.9 4.5E-23 1.5E-27 206.8 20.2 224 201-432 34-280 (382)
48 1j32_A Aspartate aminotransfer 99.9 4.1E-22 1.4E-26 202.3 27.5 214 212-431 69-314 (388)
49 3kax_A Aminotransferase, class 99.9 4.7E-22 1.6E-26 200.7 26.5 226 201-432 54-311 (383)
50 1elu_A L-cysteine/L-cystine C- 99.9 2.4E-22 8.2E-27 203.0 24.2 219 210-431 59-320 (390)
51 3e2y_A Kynurenine-oxoglutarate 99.9 1.9E-22 6.5E-27 206.0 23.7 210 212-427 63-320 (410)
52 3nyt_A Aminotransferase WBPE; 99.9 1.2E-22 4E-27 205.8 21.6 211 208-428 33-267 (367)
53 3ju7_A Putative PLP-dependent 99.9 7.3E-23 2.5E-27 209.9 20.2 211 209-430 35-274 (377)
54 1b9h_A AHBA synthase, protein 99.9 1.5E-22 5.1E-27 205.8 22.0 217 204-432 32-278 (388)
55 1c7n_A Cystalysin; transferase 99.9 1.6E-21 5.3E-26 198.8 28.8 215 212-431 68-318 (399)
56 1v2d_A Glutamine aminotransfer 99.9 7E-22 2.4E-26 200.4 26.0 211 211-427 62-297 (381)
57 1u08_A Hypothetical aminotrans 99.9 9.7E-22 3.3E-26 199.7 27.1 210 212-427 69-309 (386)
58 3vax_A Putative uncharacterize 99.9 1E-22 3.6E-27 207.0 19.6 224 201-431 54-306 (400)
59 1o4s_A Aspartate aminotransfer 99.9 8.4E-22 2.9E-26 201.1 26.3 211 211-427 79-316 (389)
60 3fvs_A Kynurenine--oxoglutarat 99.9 8.7E-22 3E-26 202.1 26.1 215 210-431 71-330 (422)
61 1gd9_A Aspartate aminotransfer 99.9 9.8E-22 3.4E-26 199.6 26.1 210 212-427 65-308 (389)
62 2dou_A Probable N-succinyldiam 99.9 4.5E-22 1.5E-26 201.5 23.4 212 210-427 63-303 (376)
63 3uwc_A Nucleotide-sugar aminot 99.9 2.5E-22 8.6E-27 202.6 21.3 214 208-431 36-273 (374)
64 3hdo_A Histidinol-phosphate am 99.9 3.1E-22 1.1E-26 201.7 21.7 217 204-427 59-284 (360)
65 3l8a_A METC, putative aminotra 99.9 6.3E-22 2.2E-26 204.3 24.5 228 201-433 91-349 (421)
66 4eb5_A Probable cysteine desul 99.9 1.9E-22 6.5E-27 203.2 20.0 221 205-431 38-279 (382)
67 3zrp_A Serine-pyruvate aminotr 99.9 3.7E-22 1.3E-26 200.9 22.1 215 208-427 33-285 (384)
68 3frk_A QDTB; aminotransferase, 99.9 2.6E-22 8.8E-27 203.3 20.7 211 208-428 34-268 (373)
69 3fdb_A Beta C-S lyase, putativ 99.9 7.6E-22 2.6E-26 199.0 23.8 224 202-431 54-302 (377)
70 3lws_A Aromatic amino acid bet 99.9 3.7E-22 1.3E-26 200.4 21.4 221 209-436 46-284 (357)
71 2oga_A Transaminase; PLP-depen 99.9 7.9E-22 2.7E-26 202.2 23.2 213 209-431 62-298 (399)
72 1lc5_A COBD, L-threonine-O-3-p 99.9 9.8E-22 3.3E-26 198.3 22.9 215 207-431 56-291 (364)
73 3pj0_A LMO0305 protein; struct 99.9 6.2E-22 2.1E-26 198.6 21.4 219 208-433 46-283 (359)
74 1xi9_A Putative transaminase; 99.9 2.2E-21 7.5E-26 198.8 25.9 213 212-431 80-327 (406)
75 1eg5_A Aminotransferase; PLP-d 99.9 5.2E-22 1.8E-26 199.9 20.8 218 208-431 42-282 (384)
76 2o1b_A Aminotransferase, class 99.9 7.1E-22 2.4E-26 203.0 22.2 211 211-427 86-326 (404)
77 3dyd_A Tyrosine aminotransfera 99.9 2E-21 7E-26 201.2 25.7 218 209-433 95-349 (427)
78 3ftb_A Histidinol-phosphate am 99.9 8.8E-22 3E-26 197.4 22.1 218 205-435 56-294 (361)
79 2x5d_A Probable aminotransfera 99.9 2.5E-21 8.5E-26 198.8 25.7 212 210-427 75-318 (412)
80 3h14_A Aminotransferase, class 99.9 3E-21 1E-25 196.4 26.1 209 212-429 70-304 (391)
81 2o0r_A RV0858C (N-succinyldiam 99.9 4.1E-21 1.4E-25 197.1 27.2 210 212-427 64-306 (411)
82 3g0t_A Putative aminotransfera 99.9 6E-22 2E-26 204.2 20.6 211 212-427 84-354 (437)
83 3jtx_A Aminotransferase; NP_28 99.9 3E-21 1E-25 196.2 25.5 213 209-427 69-317 (396)
84 1yiz_A Kynurenine aminotransfe 99.9 6E-21 2.1E-25 196.8 27.1 210 212-427 79-335 (429)
85 2z9v_A Aspartate aminotransfer 99.9 2.5E-21 8.7E-26 196.2 23.5 215 209-427 41-289 (392)
86 2r2n_A Kynurenine/alpha-aminoa 99.9 9E-21 3.1E-25 196.1 28.0 221 210-436 82-350 (425)
87 1vjo_A Alanine--glyoxylate ami 99.9 1.4E-21 4.8E-26 198.5 21.2 220 204-427 61-314 (393)
88 3b46_A Aminotransferase BNA3; 99.9 3.4E-21 1.2E-25 200.9 24.5 210 212-427 97-350 (447)
89 3ruy_A Ornithine aminotransfer 99.9 2.9E-21 9.8E-26 196.6 22.9 223 201-427 69-322 (392)
90 3isl_A Purine catabolism prote 99.9 1.2E-21 4.3E-26 199.8 20.1 170 209-382 43-221 (416)
91 1d2f_A MALY protein; aminotran 99.9 1.5E-20 5.2E-25 191.1 27.8 210 215-430 69-313 (390)
92 3nnk_A Ureidoglycine-glyoxylat 99.9 2.1E-21 7.4E-26 197.7 21.2 170 210-383 46-224 (411)
93 3p1t_A Putative histidinol-pho 99.9 3.2E-21 1.1E-25 191.5 21.9 211 204-427 45-268 (337)
94 2bwn_A 5-aminolevulinate synth 99.9 1.8E-20 6.2E-25 191.2 28.0 212 208-427 89-321 (401)
95 3f9t_A TDC, L-tyrosine decarbo 99.9 1.3E-21 4.6E-26 197.1 19.1 216 209-431 68-331 (397)
96 2c81_A Glutamine-2-deoxy-scyll 99.9 1.2E-20 4.2E-25 194.2 26.3 212 210-432 42-291 (418)
97 2po3_A 4-dehydrase; external a 99.9 2.4E-20 8.3E-25 192.6 28.0 212 209-432 51-285 (424)
98 2huf_A Alanine glyoxylate amin 99.9 4E-21 1.4E-25 194.8 21.5 220 204-427 46-302 (393)
99 2gb3_A Aspartate aminotransfer 99.9 6E-21 2E-25 196.0 23.0 209 212-427 81-317 (409)
100 3ezs_A Aminotransferase ASPB; 99.9 3.2E-21 1.1E-25 194.7 20.3 210 210-425 63-301 (376)
101 1mdo_A ARNB aminotransferase; 99.9 6.3E-21 2.2E-25 193.6 22.4 210 208-428 37-281 (393)
102 3cq5_A Histidinol-phosphate am 99.9 5.7E-21 2E-25 193.3 21.7 213 208-427 67-301 (369)
103 2fnu_A Aminotransferase; prote 99.9 8E-21 2.7E-25 191.1 22.2 212 209-431 31-271 (375)
104 3dr4_A Putative perosamine syn 99.9 1.2E-20 4E-25 192.2 23.6 213 207-431 53-291 (391)
105 2x5f_A Aspartate_tyrosine_phen 99.9 1.2E-20 4E-25 194.9 23.7 210 212-426 90-353 (430)
106 2eh6_A Acoat, acetylornithine 99.9 6.4E-21 2.2E-25 192.4 20.9 219 206-429 66-311 (375)
107 2ch1_A 3-hydroxykynurenine tra 99.9 8.2E-21 2.8E-25 192.7 21.7 220 204-427 45-301 (396)
108 2zyj_A Alpha-aminodipate amino 99.9 4.8E-21 1.6E-25 195.5 19.9 216 210-431 74-317 (397)
109 1iay_A ACC synthase 2, 1-amino 99.9 8.7E-21 3E-25 195.7 22.0 217 205-427 77-343 (428)
110 3kgw_A Alanine-glyoxylate amin 99.9 6.4E-21 2.2E-25 192.4 20.4 215 209-427 55-306 (393)
111 3aow_A Putative uncharacterize 99.9 3.2E-20 1.1E-24 194.2 25.8 215 212-432 120-370 (448)
112 1bw0_A TAT, protein (tyrosine 99.9 2.8E-20 9.5E-25 190.8 24.6 215 211-432 76-337 (416)
113 1iug_A Putative aspartate amin 99.9 1.1E-20 3.6E-25 188.3 20.7 212 210-430 34-273 (352)
114 3ele_A Amino transferase; RER0 99.9 2.9E-20 9.8E-25 189.3 24.0 211 210-427 80-323 (398)
115 1v72_A Aldolase; PLP-dependent 99.9 6.5E-20 2.2E-24 182.9 26.0 219 208-433 41-289 (356)
116 3fkd_A L-threonine-O-3-phospha 99.9 5E-21 1.7E-25 191.9 17.9 216 204-432 44-272 (350)
117 3tcm_A Alanine aminotransferas 99.9 3.3E-20 1.1E-24 197.0 24.9 217 210-432 138-408 (500)
118 4adb_A Succinylornithine trans 99.9 1.5E-20 5.2E-25 191.6 21.2 220 202-427 73-322 (406)
119 3ihj_A Alanine aminotransferas 99.9 5.3E-20 1.8E-24 195.5 25.8 225 202-432 125-407 (498)
120 1vp4_A Aminotransferase, putat 99.9 2.1E-20 7.2E-25 193.1 22.0 211 211-427 86-334 (425)
121 3ffr_A Phosphoserine aminotran 99.9 1.8E-20 6.2E-25 187.0 20.8 213 210-432 43-290 (362)
122 2zc0_A Alanine glyoxylate tran 99.9 1.6E-20 5.5E-25 191.7 20.7 214 211-430 76-326 (407)
123 3t18_A Aminotransferase class 99.9 3.8E-20 1.3E-24 189.8 23.4 214 209-427 82-346 (413)
124 3f0h_A Aminotransferase; RER07 99.9 2.9E-20 1E-24 187.3 21.3 214 210-428 52-298 (376)
125 1m32_A 2-aminoethylphosphonate 99.8 9.5E-21 3.2E-25 189.1 16.8 213 210-427 37-285 (366)
126 2bkw_A Alanine-glyoxylate amin 99.8 1E-19 3.6E-24 183.3 24.3 214 211-430 39-303 (385)
127 3piu_A 1-aminocyclopropane-1-c 99.8 6.4E-20 2.2E-24 189.9 23.1 211 212-427 88-348 (435)
128 2yrr_A Aminotransferase, class 99.8 2.1E-20 7.3E-25 185.6 18.8 214 210-430 33-276 (353)
129 7aat_A Aspartate aminotransfer 99.8 3.5E-19 1.2E-23 181.7 27.5 211 212-427 73-336 (401)
130 3rq1_A Aminotransferase class 99.8 1.1E-19 3.6E-24 186.8 23.6 212 211-427 85-348 (418)
131 3b8x_A WBDK, pyridoxamine 5-ph 99.8 1.1E-19 3.8E-24 185.2 23.4 213 208-431 32-293 (390)
132 3ppl_A Aspartate aminotransfer 99.8 5.6E-20 1.9E-24 189.8 21.0 211 210-426 78-334 (427)
133 3mad_A Sphingosine-1-phosphate 99.8 7.3E-20 2.5E-24 194.3 22.2 215 212-433 141-402 (514)
134 3if2_A Aminotransferase; YP_26 99.8 5.2E-20 1.8E-24 190.6 20.2 215 212-429 85-354 (444)
135 3meb_A Aspartate aminotransfer 99.8 2.3E-19 7.8E-24 187.4 25.1 224 201-427 87-371 (448)
136 3e9k_A Kynureninase; kynurenin 99.8 4.8E-20 1.6E-24 192.8 19.9 216 210-427 111-375 (465)
137 1o69_A Aminotransferase; struc 99.8 2.4E-19 8.2E-24 183.6 24.6 209 209-427 31-266 (394)
138 1qz9_A Kynureninase; kynurenin 99.8 6.9E-20 2.4E-24 187.3 19.5 218 209-431 70-331 (416)
139 1svv_A Threonine aldolase; str 99.8 1E-19 3.5E-24 181.4 20.0 224 201-431 40-290 (359)
140 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 2.7E-19 9.3E-24 185.8 24.0 215 208-431 60-331 (437)
141 3nx3_A Acoat, acetylornithine 99.8 1.9E-19 6.5E-24 183.5 22.2 228 201-433 69-329 (395)
142 3hbx_A GAD 1, glutamate decarb 99.8 3.1E-19 1.1E-23 189.8 24.6 217 213-435 98-369 (502)
143 1uu1_A Histidinol-phosphate am 99.8 1.8E-19 6.2E-24 179.9 20.4 203 207-427 53-272 (335)
144 3qgu_A LL-diaminopimelate amin 99.8 1.2E-19 4E-24 188.4 19.5 212 210-427 111-364 (449)
145 2dgk_A GAD-beta, GADB, glutama 99.8 1.7E-19 5.8E-24 188.3 20.5 214 212-433 83-352 (452)
146 3g7q_A Valine-pyruvate aminotr 99.8 4.6E-19 1.6E-23 181.3 23.1 214 211-429 76-328 (417)
147 3n0l_A Serine hydroxymethyltra 99.8 3.2E-19 1.1E-23 182.2 21.7 207 214-426 75-300 (417)
148 3ez1_A Aminotransferase MOCR f 99.8 2.4E-19 8.1E-24 184.4 20.8 211 210-426 70-328 (423)
149 1vef_A Acetylornithine/acetyl- 99.8 1.3E-19 4.4E-24 184.6 18.5 216 207-428 84-325 (395)
150 3d6k_A Putative aminotransfera 99.8 1.5E-19 5.1E-24 186.7 19.1 215 206-426 71-332 (422)
151 3a9z_A Selenocysteine lyase; P 99.8 1.3E-19 4.6E-24 186.6 18.5 215 209-428 60-326 (432)
152 1wyu_B Glycine dehydrogenase s 99.8 2.8E-19 9.7E-24 188.3 20.9 212 210-427 107-363 (474)
153 1ajs_A Aspartate aminotransfer 99.8 1.2E-18 4E-23 178.4 24.6 215 209-428 73-345 (412)
154 4eu1_A Mitochondrial aspartate 99.8 5.6E-19 1.9E-23 181.1 22.0 214 210-428 79-345 (409)
155 4f4e_A Aromatic-amino-acid ami 99.8 1.4E-18 4.7E-23 179.2 24.8 196 227-427 119-355 (420)
156 1yaa_A Aspartate aminotransfer 99.8 1.4E-18 4.7E-23 178.1 24.2 214 210-428 73-345 (412)
157 3mc6_A Sphingosine-1-phosphate 99.8 2.3E-19 8E-24 189.1 18.7 218 212-436 109-374 (497)
158 2pb2_A Acetylornithine/succiny 99.8 1.9E-18 6.3E-23 178.9 24.9 216 207-427 96-340 (420)
159 2q7w_A Aspartate aminotransfer 99.8 2.1E-18 7.2E-23 175.1 24.8 215 209-428 68-333 (396)
160 2dkj_A Serine hydroxymethyltra 99.8 4.4E-19 1.5E-23 180.6 19.1 213 208-427 63-300 (407)
161 3vp6_A Glutamate decarboxylase 99.8 8E-19 2.7E-23 187.1 21.8 226 202-434 125-415 (511)
162 3ei9_A LL-diaminopimelate amin 99.8 8E-19 2.7E-23 181.2 21.1 212 210-427 98-352 (432)
163 2ez2_A Beta-tyrosinase, tyrosi 99.8 1.2E-18 4E-23 181.3 22.3 210 208-427 73-332 (456)
164 2oat_A Ornithine aminotransfer 99.8 4E-18 1.4E-22 177.8 26.3 218 207-427 115-363 (439)
165 3bwn_A AT1G70560, L-tryptophan 99.8 4.1E-19 1.4E-23 182.3 18.4 205 213-430 71-304 (391)
166 2z67_A O-phosphoseryl-tRNA(SEC 99.8 7.3E-19 2.5E-23 184.3 20.5 210 211-428 134-370 (456)
167 2ord_A Acoat, acetylornithine 99.8 1.8E-19 6.3E-24 183.8 15.2 214 207-427 79-321 (397)
168 3ke3_A Putative serine-pyruvat 99.8 2.9E-18 9.9E-23 174.8 24.0 213 210-427 35-294 (379)
169 1z7d_A Ornithine aminotransfer 99.8 3.6E-18 1.2E-22 177.7 24.9 217 207-426 104-351 (433)
170 3fsl_A Aromatic-amino-acid ami 99.8 5.9E-18 2E-22 171.9 25.2 212 212-428 72-334 (397)
171 3gbx_A Serine hydroxymethyltra 99.8 1.1E-18 3.8E-23 178.1 18.9 212 210-427 76-308 (420)
172 3h7f_A Serine hydroxymethyltra 99.8 1.2E-18 4.2E-23 181.8 19.7 205 217-427 98-321 (447)
173 3b1d_A Betac-S lyase; HET: PLP 99.7 3.3E-21 1.1E-25 196.7 0.0 215 212-431 68-318 (392)
174 3f6t_A Aspartate aminotransfer 99.8 2.8E-18 9.7E-23 183.8 22.5 143 227-375 166-330 (533)
175 2ay1_A Aroat, aromatic amino a 99.8 2.9E-18 9.9E-23 174.3 21.4 213 210-427 69-329 (394)
176 3asa_A LL-diaminopimelate amin 99.8 3.1E-18 1E-22 175.3 20.6 212 210-427 75-315 (400)
177 2a7v_A Serine hydroxymethyltra 99.8 9.5E-19 3.3E-23 186.0 17.1 221 201-427 85-354 (490)
178 1c4k_A Protein (ornithine deca 99.8 3.1E-18 1E-22 189.9 21.5 218 208-431 171-443 (730)
179 1js3_A DDC;, DOPA decarboxylas 99.8 4.2E-18 1.4E-22 179.4 21.5 221 209-436 108-404 (486)
180 3ecd_A Serine hydroxymethyltra 99.8 8.7E-18 3E-22 171.7 23.0 210 212-427 80-309 (425)
181 1ax4_A Tryptophanase; tryptoph 99.8 4.8E-18 1.7E-22 176.9 21.3 212 208-426 74-341 (467)
182 2jis_A Cysteine sulfinic acid 99.8 8.6E-18 2.9E-22 178.8 22.7 218 212-433 150-426 (515)
183 2okj_A Glutamate decarboxylase 99.8 5.6E-18 1.9E-22 179.5 21.1 217 213-433 135-411 (504)
184 1rv3_A Serine hydroxymethyltra 99.8 7.1E-18 2.4E-22 178.3 21.5 211 214-431 94-347 (483)
185 3dxv_A Alpha-amino-epsilon-cap 99.8 9.3E-18 3.2E-22 173.8 20.3 226 201-431 77-347 (439)
186 2vi8_A Serine hydroxymethyltra 99.8 6.2E-18 2.1E-22 171.9 18.3 214 208-427 63-299 (405)
187 2vyc_A Biodegradative arginine 99.8 2.1E-17 7E-22 184.2 22.6 215 207-429 202-466 (755)
188 2hox_A ALLIIN lyase 1; cystein 99.8 4.1E-18 1.4E-22 177.4 15.8 205 212-430 102-339 (427)
189 2x3l_A ORN/Lys/Arg decarboxyla 99.8 3.3E-18 1.1E-22 179.1 15.1 166 201-378 48-230 (446)
190 3a8u_X Omega-amino acid--pyruv 99.8 9E-17 3.1E-21 167.0 25.3 218 206-426 89-367 (449)
191 2qma_A Diaminobutyrate-pyruvat 99.8 2.6E-17 9E-22 174.0 20.4 227 201-433 129-419 (497)
192 2c0r_A PSAT, phosphoserine ami 99.8 6.1E-18 2.1E-22 170.1 14.4 205 210-430 49-285 (362)
193 4e1o_A HDC, histidine decarbox 99.8 5.1E-17 1.8E-21 171.6 22.1 226 201-433 107-405 (481)
194 1s0a_A Adenosylmethionine-8-am 99.7 8.9E-17 3E-21 165.9 23.1 221 204-427 80-350 (429)
195 3k7y_A Aspartate aminotransfer 99.7 2.4E-16 8.1E-21 163.4 24.8 191 229-425 101-333 (405)
196 4a6r_A Omega transaminase; tra 99.7 2.8E-16 9.7E-21 164.3 25.1 229 202-433 86-373 (459)
197 3k40_A Aromatic-L-amino-acid d 99.7 1.3E-16 4.4E-21 168.5 22.2 226 201-433 102-398 (475)
198 2epj_A Glutamate-1-semialdehyd 99.7 5.5E-17 1.9E-21 167.9 19.0 217 207-427 93-344 (434)
199 3n75_A LDC, lysine decarboxyla 99.7 4.5E-17 1.5E-21 179.8 19.3 213 208-429 193-444 (715)
200 1wyu_A Glycine dehydrogenase ( 99.7 1.1E-16 3.7E-21 166.4 20.7 214 210-432 108-368 (438)
201 1w23_A Phosphoserine aminotran 99.7 2.7E-18 9.3E-23 171.9 8.0 205 210-430 48-284 (360)
202 2eo5_A 419AA long hypothetical 99.7 2.2E-16 7.4E-21 163.0 22.5 218 205-427 81-348 (419)
203 1sff_A 4-aminobutyrate aminotr 99.7 1E-16 3.4E-21 164.6 19.5 215 206-426 80-337 (426)
204 3gju_A Putative aminotransfera 99.7 4.6E-16 1.6E-20 162.8 24.4 229 202-433 87-378 (460)
205 2cy8_A D-phgat, D-phenylglycin 99.7 1.6E-16 5.6E-21 165.4 20.2 215 207-426 94-343 (453)
206 2oqx_A Tryptophanase; lyase, p 99.7 6.4E-17 2.2E-21 168.4 16.9 213 208-427 72-344 (467)
207 3dod_A Adenosylmethionine-8-am 99.7 2E-16 6.8E-21 164.9 20.3 226 205-433 82-367 (448)
208 2zy4_A L-aspartate beta-decarb 99.7 3E-16 1E-20 168.7 21.7 151 227-381 166-339 (546)
209 3l44_A Glutamate-1-semialdehyd 99.7 1.5E-16 5.3E-21 164.3 18.7 216 207-426 92-342 (434)
210 3tfu_A Adenosylmethionine-8-am 99.7 1.5E-16 5.1E-21 167.1 18.7 228 204-434 112-389 (457)
211 2fyf_A PSAT, phosphoserine ami 99.7 1.2E-16 4.2E-21 163.3 17.4 213 210-431 78-321 (398)
212 3i4j_A Aminotransferase, class 99.7 4.9E-16 1.7E-20 160.4 21.8 225 206-433 68-346 (430)
213 1zod_A DGD, 2,2-dialkylglycine 99.7 6.9E-16 2.3E-20 159.2 22.8 218 205-426 80-343 (433)
214 3n5m_A Adenosylmethionine-8-am 99.7 5.5E-16 1.9E-20 161.4 21.7 225 205-433 86-371 (452)
215 4e77_A Glutamate-1-semialdehyd 99.7 4.4E-16 1.5E-20 160.8 19.4 216 207-426 90-340 (429)
216 3oks_A 4-aminobutyrate transam 99.7 1.9E-15 6.3E-20 158.0 23.6 228 202-433 96-376 (451)
217 3fq8_A Glutamate-1-semialdehyd 99.7 4.5E-16 1.5E-20 160.5 18.1 216 207-426 89-339 (427)
218 3k28_A Glutamate-1-semialdehyd 99.7 2.8E-16 9.7E-21 162.5 16.6 216 207-426 90-339 (429)
219 3hmu_A Aminotransferase, class 99.7 1.2E-15 4E-20 161.0 21.4 228 202-433 91-375 (472)
220 2e7u_A Glutamate-1-semialdehyd 99.7 9E-16 3.1E-20 158.3 19.7 214 207-426 89-339 (424)
221 3i5t_A Aminotransferase; pyrid 99.7 4.6E-15 1.6E-19 156.5 24.9 229 202-433 88-378 (476)
222 4ffc_A 4-aminobutyrate aminotr 99.7 2.6E-15 8.9E-20 157.1 21.7 227 202-433 99-374 (453)
223 2cjg_A L-lysine-epsilon aminot 99.7 2.5E-15 8.7E-20 156.9 19.3 214 205-426 96-370 (449)
224 4h51_A Aspartate aminotransfer 99.6 3.5E-14 1.2E-18 148.0 24.0 236 185-427 64-351 (420)
225 3hl2_A O-phosphoseryl-tRNA(SEC 99.6 3.2E-14 1.1E-18 148.6 18.2 205 216-427 123-355 (501)
226 2yky_A Beta-transaminase; tran 99.4 1.2E-16 4.2E-21 168.7 0.0 216 206-426 136-374 (465)
227 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 5E-14 1.7E-18 147.6 18.6 211 212-428 100-338 (450)
228 3ou5_A Serine hydroxymethyltra 99.5 2.6E-13 8.9E-18 141.2 17.9 222 201-428 85-355 (490)
229 3e77_A Phosphoserine aminotran 99.5 3.1E-13 1.1E-17 139.0 17.3 209 210-431 58-296 (377)
230 1ohv_A 4-aminobutyrate aminotr 99.4 2.2E-12 7.4E-17 135.9 16.2 206 210-426 110-393 (472)
231 3m5u_A Phosphoserine aminotran 99.4 2.9E-12 9.8E-17 131.0 14.8 204 210-430 50-283 (361)
232 3qm2_A Phosphoserine aminotran 99.4 9E-13 3.1E-17 135.9 10.6 205 209-428 71-308 (386)
233 4ao9_A Beta-phenylalanine amin 99.4 1.4E-11 4.8E-16 129.6 18.4 215 208-426 125-360 (454)
234 4atq_A 4-aminobutyrate transam 99.2 2.2E-09 7.4E-14 113.0 23.9 214 208-425 105-363 (456)
235 4e3q_A Pyruvate transaminase; 99.1 9.3E-09 3.2E-13 108.6 26.0 226 208-436 109-395 (473)
236 4a0g_A Adenosylmethionine-8-am 99.0 2.2E-09 7.4E-14 120.8 12.1 226 207-435 421-757 (831)
237 3ic5_A Putative saccharopine d 63.2 51 0.0017 25.7 9.5 90 227-330 7-97 (118)
238 3dr5_A Putative O-methyltransf 59.0 98 0.0033 28.0 11.8 120 208-335 37-165 (221)
239 2yxb_A Coenzyme B12-dependent 55.1 21 0.00072 31.2 6.1 75 250-326 19-97 (161)
240 3c85_A Putative glutathione-re 51.3 38 0.0013 29.4 7.3 88 226-326 40-130 (183)
241 3ruf_A WBGU; rossmann fold, UD 51.1 98 0.0033 29.4 10.9 99 227-327 26-143 (351)
242 3i6i_A Putative leucoanthocyan 48.8 55 0.0019 31.3 8.7 92 241-336 26-121 (346)
243 1xrs_B D-lysine 5,6-aminomutas 48.1 1.2E+02 0.0042 28.8 10.6 122 232-356 103-243 (262)
244 2avd_A Catechol-O-methyltransf 46.6 1.5E+02 0.0051 26.1 10.8 122 209-335 54-181 (229)
245 2xhz_A KDSD, YRBH, arabinose 5 46.4 1E+02 0.0034 26.6 9.3 40 309-354 106-147 (183)
246 1qyd_A Pinoresinol-lariciresin 43.4 99 0.0034 28.7 9.3 85 241-328 20-110 (313)
247 3tr6_A O-methyltransferase; ce 42.9 1.7E+02 0.0058 25.7 10.5 120 209-336 49-177 (225)
248 3sho_A Transcriptional regulat 42.5 1.4E+02 0.0048 25.7 9.6 43 309-357 97-141 (187)
249 1lss_A TRK system potassium up 41.3 1.3E+02 0.0046 23.9 9.8 89 227-326 6-94 (140)
250 4gqr_A Pancreatic alpha-amylas 40.3 16 0.00055 36.9 3.3 83 247-335 7-99 (496)
251 1sui_A Caffeoyl-COA O-methyltr 40.0 2.2E+02 0.0075 26.0 12.2 123 209-336 64-193 (247)
252 2r6j_A Eugenol synthase 1; phe 39.8 76 0.0026 29.8 7.9 84 241-331 27-112 (318)
253 3llv_A Exopolyphosphatase-rela 39.2 1.4E+02 0.0047 24.3 8.6 89 226-326 7-95 (141)
254 1zco_A 2-dehydro-3-deoxyphosph 39.0 1.2E+02 0.004 28.8 9.0 67 273-339 129-205 (262)
255 3c3y_A Pfomt, O-methyltransfer 38.3 2.2E+02 0.0077 25.6 11.1 119 209-335 55-183 (237)
256 3tfw_A Putative O-methyltransf 37.9 2.3E+02 0.0079 25.7 11.3 123 209-336 48-173 (248)
257 1y80_A Predicted cobalamin bin 37.6 72 0.0025 28.7 7.0 84 250-335 89-180 (210)
258 3bo9_A Putative nitroalkan dio 37.2 2.6E+02 0.0088 27.0 11.4 169 173-352 25-203 (326)
259 3dm5_A SRP54, signal recogniti 36.3 1.4E+02 0.0047 30.6 9.6 125 211-336 75-225 (443)
260 3gi1_A LBP, laminin-binding pr 35.7 64 0.0022 30.8 6.6 70 248-331 178-256 (286)
261 2zcu_A Uncharacterized oxidore 35.7 1.2E+02 0.0041 27.7 8.4 53 273-327 44-96 (286)
262 3khj_A Inosine-5-monophosphate 35.7 2.7E+02 0.0094 27.4 11.5 109 243-352 111-234 (361)
263 3keo_A Redox-sensing transcrip 35.4 15 0.0005 34.1 1.9 105 211-334 67-180 (212)
264 1tks_A 3,4-dihydroxy-2-butanon 35.3 48 0.0017 30.5 5.3 36 296-331 159-194 (204)
265 1m3s_A Hypothetical protein YC 34.8 2E+02 0.0069 24.6 9.4 102 213-354 25-130 (186)
266 1qop_A Tryptophan synthase alp 34.0 1.7E+02 0.0057 27.5 9.2 108 242-351 115-231 (268)
267 3tsm_A IGPS, indole-3-glycerol 33.4 95 0.0033 29.7 7.3 97 251-352 97-194 (272)
268 4df3_A Fibrillarin-like rRNA/T 33.2 38 0.0013 31.6 4.4 128 203-334 51-184 (233)
269 3vnd_A TSA, tryptophan synthas 32.6 1.3E+02 0.0045 28.5 8.2 89 242-332 116-212 (267)
270 3cbg_A O-methyltransferase; cy 32.5 2.7E+02 0.0093 24.8 12.2 120 208-335 56-184 (232)
271 2jl1_A Triphenylmethane reduct 32.3 1.9E+02 0.0066 26.2 9.3 92 229-327 3-99 (287)
272 3duw_A OMT, O-methyltransferas 32.3 2.5E+02 0.0087 24.5 11.4 120 209-336 43-170 (223)
273 3tla_A MCCF; serine protease, 32.2 93 0.0032 31.1 7.3 74 246-319 40-135 (371)
274 4h1h_A LMO1638 protein; MCCF-l 31.8 87 0.003 30.5 7.0 74 245-318 8-103 (327)
275 1g94_A Alpha-amylase; beta-alp 31.4 24 0.00084 35.8 2.9 32 304-335 56-87 (448)
276 1jeo_A MJ1247, hypothetical pr 31.3 1.8E+02 0.006 24.9 8.3 103 213-356 28-134 (180)
277 1vim_A Hypothetical protein AF 31.3 1.7E+02 0.0057 25.8 8.4 41 309-353 99-139 (200)
278 3e48_A Putative nucleoside-dip 30.9 1.5E+02 0.0052 27.1 8.3 54 272-327 43-98 (289)
279 2o1e_A YCDH; alpha-beta protei 30.9 93 0.0032 30.1 6.9 69 248-330 189-266 (312)
280 3tnl_A Shikimate dehydrogenase 30.4 61 0.0021 31.7 5.5 103 226-337 155-266 (315)
281 1qyc_A Phenylcoumaran benzylic 30.4 1E+02 0.0035 28.5 7.1 85 241-331 20-110 (308)
282 2g1u_A Hypothetical protein TM 30.3 2.3E+02 0.008 23.4 10.2 95 225-332 19-117 (155)
283 3l4b_C TRKA K+ channel protien 30.1 2.8E+02 0.0094 24.5 9.7 86 228-324 3-88 (218)
284 3dhn_A NAD-dependent epimerase 30.0 1.9E+02 0.0067 25.2 8.6 91 228-327 7-104 (227)
285 3c1o_A Eugenol synthase; pheny 29.2 1.4E+02 0.0047 27.9 7.8 60 272-336 55-115 (321)
286 4e5s_A MCCFLIKE protein (BA_56 29.1 97 0.0033 30.4 6.8 75 245-319 8-104 (331)
287 3sr3_A Microcin immunity prote 28.9 1.1E+02 0.0038 30.0 7.1 75 245-319 9-105 (336)
288 3enk_A UDP-glucose 4-epimerase 28.8 1.4E+02 0.0047 28.1 7.8 77 228-304 7-86 (341)
289 2gas_A Isoflavone reductase; N 28.7 1.6E+02 0.0054 27.2 8.0 55 272-331 54-109 (307)
290 3bh4_A Alpha-amylase; calcium, 28.5 34 0.0012 35.1 3.4 31 305-335 71-101 (483)
291 1vhx_A Putative holliday junct 27.6 76 0.0026 27.4 5.1 56 284-339 43-104 (150)
292 1wpc_A Glucan 1,4-alpha-maltoh 27.5 35 0.0012 34.9 3.4 28 308-335 78-105 (485)
293 1ud2_A Amylase, alpha-amylase; 27.4 36 0.0012 34.9 3.4 28 308-335 76-103 (480)
294 2xij_A Methylmalonyl-COA mutas 27.1 3E+02 0.01 30.3 10.7 81 250-332 605-692 (762)
295 1req_A Methylmalonyl-COA mutas 26.8 2.5E+02 0.0086 30.7 10.0 82 250-333 597-685 (727)
296 1mxg_A Alpha amylase; hyperthe 26.8 37 0.0013 34.4 3.4 28 308-335 82-109 (435)
297 1hvx_A Alpha-amylase; hydrolas 26.7 37 0.0013 35.2 3.4 30 306-335 75-104 (515)
298 3kts_A Glycerol uptake operon 26.4 79 0.0027 28.7 5.1 43 283-331 17-59 (192)
299 3qtp_A Enolase 1; glycolysis, 26.3 1.8E+02 0.0063 29.8 8.4 96 236-334 283-381 (441)
300 1pq4_A Periplasmic binding pro 26.3 1.7E+02 0.0057 27.9 7.8 69 248-330 189-264 (291)
301 3mfq_A TROA, high-affinity zin 26.2 36 0.0012 32.5 3.0 71 250-331 164-243 (282)
302 1gcy_A Glucan 1,4-alpha-maltot 25.8 40 0.0014 35.1 3.5 29 307-335 87-115 (527)
303 3qja_A IGPS, indole-3-glycerol 25.8 91 0.0031 29.7 5.7 99 251-354 90-189 (272)
304 2aef_A Calcium-gated potassium 25.7 2.6E+02 0.0088 25.0 8.7 112 226-353 10-124 (234)
305 2xw6_A MGS, methylglyoxal synt 25.6 45 0.0015 28.6 3.1 45 287-332 65-111 (134)
306 3nav_A Tryptophan synthase alp 25.6 2.1E+02 0.0071 27.2 8.2 89 242-332 118-214 (271)
307 4aie_A Glucan 1,6-alpha-glucos 25.5 34 0.0012 35.2 2.8 28 308-335 75-102 (549)
308 1zk4_A R-specific alcohol dehy 25.4 2.2E+02 0.0076 25.3 8.2 78 227-304 7-90 (251)
309 1ccw_A Protein (glutamate muta 24.9 63 0.0021 27.2 3.9 75 258-334 15-93 (137)
310 3io5_A Recombination and repai 24.9 3.4E+02 0.011 26.7 9.7 81 248-332 57-168 (333)
311 1lwj_A 4-alpha-glucanotransfer 24.6 37 0.0013 34.3 2.8 28 308-335 65-92 (441)
312 2ya0_A Putative alkaline amylo 24.5 34 0.0012 37.3 2.6 32 305-336 247-278 (714)
313 1xgk_A Nitrogen metabolite rep 24.5 2.5E+02 0.0085 27.0 8.9 81 241-326 21-103 (352)
314 2oz8_A MLL7089 protein; struct 24.4 1.2E+02 0.0041 30.1 6.6 77 250-332 219-296 (389)
315 3qvo_A NMRA family protein; st 24.1 2.8E+02 0.0096 24.6 8.6 91 228-327 25-117 (236)
316 3dqp_A Oxidoreductase YLBE; al 24.1 2.2E+02 0.0077 24.8 7.8 79 240-327 15-98 (219)
317 1lu0_A CMTI-I, trypsin inhibit 24.1 17 0.00058 22.8 0.1 15 7-29 2-16 (29)
318 3u81_A Catechol O-methyltransf 24.0 2.2E+02 0.0074 25.1 7.8 125 208-337 42-174 (221)
319 3etn_A Putative phosphosugar i 23.9 2.4E+02 0.0083 25.3 8.1 42 309-354 116-159 (220)
320 3nzo_A UDP-N-acetylglucosamine 23.7 5.2E+02 0.018 25.2 11.5 109 218-327 28-157 (399)
321 1ht6_A AMY1, alpha-amylase iso 23.5 42 0.0014 33.6 2.9 29 308-336 64-92 (405)
322 3ujp_A Mn transporter subunit; 23.3 1.3E+02 0.0045 29.0 6.4 67 249-329 190-265 (307)
323 1wza_A Alpha-amylase A; hydrol 23.3 42 0.0014 34.4 3.0 27 309-335 78-104 (488)
324 2guy_A Alpha-amylase A; (beta- 23.1 41 0.0014 34.3 2.9 31 306-336 91-121 (478)
325 2e8y_A AMYX protein, pullulana 22.8 27 0.00093 38.1 1.5 27 310-336 313-339 (718)
326 3l77_A Short-chain alcohol deh 22.8 1.4E+02 0.0047 26.6 6.2 77 228-304 4-88 (235)
327 3ezx_A MMCP 1, monomethylamine 22.6 1.6E+02 0.0056 26.7 6.7 83 250-334 93-185 (215)
328 2dh2_A 4F2 cell-surface antige 22.6 45 0.0015 33.7 3.0 31 306-336 75-105 (424)
329 1jae_A Alpha-amylase; glycosid 22.6 36 0.0012 34.9 2.3 32 304-335 66-97 (471)
330 1xg5_A ARPG836; short chain de 22.2 4.4E+02 0.015 23.9 10.1 77 227-304 33-119 (279)
331 1chr_A Chloromuconate cycloiso 22.1 3E+02 0.01 26.9 9.0 89 246-336 211-300 (370)
332 3inp_A D-ribulose-phosphate 3- 22.1 1.9E+02 0.0064 27.1 7.0 105 245-353 105-222 (246)
333 3ghf_A Septum site-determining 21.7 1.6E+02 0.0056 24.3 5.9 54 273-330 15-78 (120)
334 1mct_I Trypsin inhibitor A; co 21.6 19 0.00063 22.4 -0.1 15 7-29 2-16 (28)
335 3dhu_A Alpha-amylase; structur 21.5 46 0.0016 33.6 2.8 27 309-335 80-106 (449)
336 1vmd_A MGS, methylglyoxal synt 21.3 86 0.0029 28.2 4.2 45 287-332 89-135 (178)
337 3nvt_A 3-deoxy-D-arabino-heptu 21.0 1.2E+02 0.0042 30.4 5.8 88 272-359 247-355 (385)
338 2z1k_A (NEO)pullulanase; hydro 21.0 46 0.0016 33.9 2.7 28 308-335 92-119 (475)
339 4dmm_A 3-oxoacyl-[acyl-carrier 20.8 1.8E+02 0.0061 26.8 6.7 77 226-302 28-112 (269)
340 2aaa_A Alpha-amylase; glycosid 20.8 46 0.0016 34.0 2.7 31 305-335 90-120 (484)
341 4af0_A Inosine-5'-monophosphat 20.7 1.9E+02 0.0065 30.5 7.3 110 243-353 287-412 (556)
342 1pjq_A CYSG, siroheme synthase 20.7 2.9E+02 0.0098 28.0 8.7 93 226-334 13-106 (457)
343 1b93_A Protein (methylglyoxal 20.6 70 0.0024 28.0 3.4 45 287-332 73-119 (152)
344 1sjd_A N-acylamino acid racema 20.6 2.2E+02 0.0076 27.7 7.6 88 246-335 205-293 (368)
345 3ijr_A Oxidoreductase, short c 20.5 1.4E+02 0.0047 28.0 5.9 76 227-302 48-131 (291)
346 2i2x_B MTAC, methyltransferase 20.4 1E+02 0.0035 28.9 4.8 84 249-334 123-212 (258)
347 4had_A Probable oxidoreductase 20.4 1.8E+02 0.0062 27.8 6.9 89 230-332 28-116 (350)
348 3rih_A Short chain dehydrogena 20.4 3.1E+02 0.011 25.6 8.4 75 227-302 42-125 (293)
349 3kl4_A SRP54, signal recogniti 20.4 3.1E+02 0.01 27.9 8.7 92 244-336 120-224 (433)
350 3is3_A 17BETA-hydroxysteroid d 20.3 1.7E+02 0.0059 26.8 6.4 67 227-293 19-88 (270)
351 2wc7_A Alpha amylase, catalyti 20.3 44 0.0015 34.2 2.4 27 309-335 99-125 (488)
352 1g57_A DHBP synthase, 3,4-dihy 20.0 1.6E+02 0.0054 27.3 5.8 34 297-331 168-201 (217)
353 3v2g_A 3-oxoacyl-[acyl-carrier 20.0 2.2E+02 0.0075 26.3 7.1 76 227-302 32-115 (271)
No 1
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=100.00 E-value=4.8e-54 Score=450.71 Aligned_cols=309 Identities=30% Similarity=0.470 Sum_probs=245.7
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|+|+.++ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|+.++||++|++++|.+.++++
T Consensus 26 ~~~t~~~h~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~ 103 (430)
T 3ri6_A 26 GFTTRALHVPKAKR--DVHGALRTPVYDNAAFEFENSDEIAQVSLGRALGHVYSRSSNPTVEDLEQRLKNLTGALGVLAL 103 (430)
T ss_dssp CHHHHHHCCC----------------------------------------------CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcchhheeCCCCCC--CCCCCcCCCcccccccccCCHHHHHHHhhcccCCccccCCCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 37899999997653 3478999999999999999998887777777778999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+||++|+.+++.+++++||+|+++++.|++++..+...+...|+++.+++..|+++|+++++++ |++|++|+|+||+|.
T Consensus 104 ~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~-t~~v~~e~p~NptG~ 182 (430)
T 3ri6_A 104 GSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDET-TKLLFLETISNPQLQ 182 (430)
T ss_dssp SCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTT-EEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCC-CeEEEEECCCCCCCe
Confidence 9999999999999999999999999999999887766777889999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEe--ChHH-------------
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG--SGKL------------- 376 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg--~~el------------- 376 (466)
+.|+++|.++|+++|++||+|++|+.+..+++..+|+|++++|+||+++||++++||+++. +.++
T Consensus 183 ~~dl~~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~ 262 (430)
T 3ri6_A 183 VADLEALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKA 262 (430)
T ss_dssp CCCHHHHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHH
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhh
Confidence 9999999999999999999999999998899999999999999999999999999999994 3222
Q ss_pred -----HHHHHH-HHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhh
Q 012321 377 -----VTQIRN-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQ 450 (466)
Q Consensus 377 -----i~~l~~-~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~ 450 (466)
+.+++. ....+|..++++.+|+++++++++..|++++.+|+++++++|+++|.|++|+||+|++||+|+++++|
T Consensus 263 g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~ 342 (430)
T 3ri6_A 263 GPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQ 342 (430)
T ss_dssp GGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHH
T ss_pred chhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHh
Confidence 333332 34567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcce-EEEEEece
Q 012321 451 MTGFGG-VVSFEVCV 464 (466)
Q Consensus 451 ~~g~Gg-l~sfel~~ 464 (466)
| |+|| ||+|+|++
T Consensus 343 ~-g~Gg~~lsf~l~~ 356 (430)
T 3ri6_A 343 F-RYAGSILTFELES 356 (430)
T ss_dssp C-SSCCSEEEEECSS
T ss_pred C-CCCceEEEEEECC
Confidence 9 9999 99999974
No 2
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=5.7e-53 Score=444.42 Aligned_cols=319 Identities=87% Similarity=1.283 Sum_probs=294.7
Q ss_pred hhhccCCCccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhC
Q 012321 145 NEASFLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEG 224 (466)
Q Consensus 145 ~~~~~~~~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g 224 (466)
++++|++..+|+++|+|+..+.+..++++.+|||+|+||.|++.++..+.+.++..+|.|+|+++|+.++||++|++++|
T Consensus 49 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~Pi~~t~t~~~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~lA~l~g 128 (445)
T 1qgn_A 49 KYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEG 128 (445)
T ss_dssp CCCTTCCSHHHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHT
T ss_pred cccccCCCcccEEEecCCCCCcCCCCCCcCCCcccCCceecCCHHHHHhhhccccCCccccCCCChHHHHHHHHHHHHhC
Confidence 55666654499999999865311357899999999999999999888877777777899999999999999999999999
Q ss_pred CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCc-eEEEEe
Q 012321 225 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV-SLFFTE 303 (466)
Q Consensus 225 ~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~t-klV~le 303 (466)
.+++++++||++|+.+++.+++++||+||++++.|++++.++...++..|+++.+++..|+++|+++++++ | ++|++|
T Consensus 129 ~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~-tv~lV~le 207 (445)
T 1qgn_A 129 AESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQK-KVNLFFTE 207 (445)
T ss_dssp CSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHS-CEEEEEEE
T ss_pred CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccC-CCCEEEEe
Confidence 99999999999999999999999999999999999998887766678889999999988999999999875 8 999999
Q ss_pred CCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH
Q 012321 304 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL 383 (466)
Q Consensus 304 sPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~ 383 (466)
+|+||+|.+.|+++|.++|+++|+++|+|++|+.++...++.+|+|++++|+||+++|++|+++|+++++++++++++..
T Consensus 208 ~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~ 287 (445)
T 1qgn_A 208 SPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL 287 (445)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH
T ss_pred CCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHH
Confidence 99999999999999999999999999999999988888888889999999999999999988899999999999999888
Q ss_pred HHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEec
Q 012321 384 HHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVC 463 (466)
Q Consensus 384 ~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~ 463 (466)
...+|..++++.+|+++++++++..|++++.+++++++++|+++|.|.+|+||++++||+|+++++||+|+|+|++|+++
T Consensus 288 ~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~ 367 (445)
T 1qgn_A 288 HHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVD 367 (445)
T ss_dssp HHHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEES
T ss_pred HHHhCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEEC
Confidence 88889889999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred e
Q 012321 464 V 464 (466)
Q Consensus 464 ~ 464 (466)
+
T Consensus 368 ~ 368 (445)
T 1qgn_A 368 G 368 (445)
T ss_dssp S
T ss_pred C
Confidence 5
No 3
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.2e-52 Score=435.66 Aligned_cols=309 Identities=34% Similarity=0.553 Sum_probs=290.1
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|+|... +.++++.||||+|+||.|++.+++.+.+.+...+|.|+|+++|+.++|++++++++|.++++++
T Consensus 26 ~~~t~~~~~~~~~---~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~~~~ 102 (414)
T 3ndn_A 26 SQATVGVRGGMLR---SGFEETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFAT 102 (414)
T ss_dssp CHHHHHHHTTCCC---CTTCBSSCCBCCCSBBCCSSHHHHHHHHTTSSCCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CccceeeecCCCC---CCCCCcCCCcccCCceecCChHHHHHHHhCCcCCcCcCCCCChHHHHHHHHHHHHHCCCcEEEE
Confidence 5899999999764 2478999999999999999999888888887788999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+||++|+.+++.+++++||+|+++++.|+++...+...+...|+++.+++..|+++|+++++++ |++|++|+|+||+|.
T Consensus 103 ~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~-t~~v~le~p~NptG~ 181 (414)
T 3ndn_A 103 ASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVP-TQAVFFETPSNPMQS 181 (414)
T ss_dssp SSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSC-CSEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999998887776677789999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHH-HHHHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~-~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|++||+|++|+++....++.+|+|++++|+||+++++|++++|+++++++.+. .++.....+|..
T Consensus 182 ~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~ 261 (414)
T 3ndn_A 182 LVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 261 (414)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999887788889999999999999999999888999999998876 777777888999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++.+|+++++++++..|++++.+++++++++|+++|.|.+|+||+++++|+|+++++|++|+|+||+|+|++
T Consensus 262 ~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~ 335 (414)
T 3ndn_A 262 MSAFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDC 335 (414)
T ss_dssp CCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976
No 4
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=100.00 E-value=2.8e-52 Score=435.28 Aligned_cols=310 Identities=27% Similarity=0.462 Sum_probs=289.4
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcc-cCCCccCCCCchhHHHHHHHHHhhhCCCcEEE
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKR-RASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~-~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~ 230 (466)
+++|+++|+|..++ ..+++++||||+|+||.|++.+++.+.+.+. .++|.|+|+++|+.++||+++|+++|.+++++
T Consensus 25 ~~~t~~~~~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~ 102 (415)
T 2fq6_A 25 KLDTQLVNAGRSKK--YTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVL 102 (415)
T ss_dssp CHHHHHHHTTCCHH--HHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTSCCCTTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CcCceeEeCCCCCC--CCCCCEeCCeecccceeeCCHHHHHHhhccccCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Confidence 58899999997642 2478999999999999999999888877655 56799999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCc
Q 012321 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG 310 (466)
++||++|+.+++.+++++||+||++++.|++++..+...++..|+++++++..|+++|+++++++ |++|++|+|+||+|
T Consensus 103 ~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~-tklV~~e~~~NptG 181 (415)
T 2fq6_A 103 FPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPN-TKIVFLESPGSITM 181 (415)
T ss_dssp ESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTT-EEEEEEESSCTTTC
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccC-CcEEEEECCCCCCC
Confidence 99999999999999999999999999999999888877778889999999999999999999875 99999999999999
Q ss_pred ccccHHHHHHHHHh--cCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhC
Q 012321 311 RCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG 388 (466)
Q Consensus 311 ~v~dl~~I~ela~~--~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G 388 (466)
.+.|+++|+++|++ +|+++|+|++|+.++...++.+|+|++++|+||++++++++++|+++++++++++++......|
T Consensus 182 ~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G 261 (415)
T 2fq6_A 182 EVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMG 261 (415)
T ss_dssp CCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTT
T ss_pred EeecHHHHHHHHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcC
Confidence 99999999999999 9999999999999888888899999999999999999998889999999989999888877788
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 389 ~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
..++++.+|+++++++++..|++++.+|+..++++|+++|.|.+|+||+++++|+|+++++++.++|+|++|++++
T Consensus 262 ~~~~~~~a~~~~~~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g 337 (415)
T 2fq6_A 262 QMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKK 337 (415)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS
T ss_pred CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999986
No 5
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=100.00 E-value=1.2e-51 Score=428.15 Aligned_cols=301 Identities=39% Similarity=0.665 Sum_probs=279.0
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|+|..++ ..+++++||||+++||.|++.+ ...+|.|+|+++|+.++|+++|++++|.+.++++
T Consensus 19 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~--------~~~~~~y~r~~~p~~~~l~~~la~l~g~~~~~~~ 88 (400)
T 3nmy_A 19 SLATLAIHGGQSPD--PSTGAVMPPIYATSTYAQSSPG--------EHQGFEYSRTHNPTRFAYERCVAALEGGTRAFAF 88 (400)
T ss_dssp CHHHHHHHTTCCCC--TTTCBSSCCBCCCSBBBCSBTT--------BSSSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcchheeeCCCCCC--CCCCCcCCCccccceeeccCcc--------ccCCcccccCCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 58899999998753 3578999999999999998753 3458999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhh-cccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV-LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~-l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG 310 (466)
+||++|+.+ +..++++||+|++.++.|++++..+... ++..|+++.+++..|+++|+++++++ +++|++|+|+||+|
T Consensus 89 ~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~~~v~~e~~~np~G 166 (400)
T 3nmy_A 89 ASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRAD-TKMVWIETPTNPML 166 (400)
T ss_dssp SSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTT-EEEEEEESSCTTTC
T ss_pred cCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccC-CCEEEEECCCCCCC
Confidence 999999988 5778999999999999999988877766 77789999999999999999999874 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEE-EEE-eChHHHHHHHHHHHHhC
Q 012321 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-SIS-GSGKLVTQIRNLHHVLG 388 (466)
Q Consensus 311 ~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG-~vv-g~~eli~~l~~~~~~~G 388 (466)
.+.|+++|.++|+++|+++|+|++|++++.+.++.+|+|++++|+||+++||++.++| +++ .+++++++++.....+|
T Consensus 167 ~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g 246 (400)
T 3nmy_A 167 KLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIG 246 (400)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHC
T ss_pred eeecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999988888899999999999999999999998999 555 57788999998888899
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 389 ~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
..++++.+|+++++++++..|++++.+|+++++++|+++|.|.+|+||++++||+|+++++||+|+|+|++|+|++
T Consensus 247 ~~~~~~~a~~~l~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~ 322 (400)
T 3nmy_A 247 GVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKG 322 (400)
T ss_dssp CBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999975
No 6
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=100.00 E-value=4.7e-49 Score=406.45 Aligned_cols=303 Identities=38% Similarity=0.605 Sum_probs=282.8
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|+|..++ ..++++.||||++++|.+++.+ ....+|.|+|+++|+.++|+++|++++|.++++++
T Consensus 17 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~-------~~~~~~~y~r~~~~~~~~l~~~la~~~g~~~~~~~ 87 (392)
T 3qhx_A 17 GLATRAIHSGYRPD--PATGAVNAPIYASSTFAQDGVG-------GLRGGYEYARTGNPTRTALEAALAAVEDAAFGRAF 87 (392)
T ss_dssp CHHHHHHHSSCCCC--TTTCBSSCCBCCCSBBCCSSTT-------CCBTTBCBTTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcchhheeCCCCCC--CCCCCccCCcccCcceEecCcc-------cccCCccccCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 37899999997653 3578999999999999998753 33457999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+||++|+.+++.+++++||+|+++.+.|++++..+...++..|+++.+++..|+++|+++++++ +++|++|+|+||+|.
T Consensus 88 ~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 166 (392)
T 3qhx_A 88 SSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPT-TRLIWVETPTNPLLS 166 (392)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTT-EEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCC-CeEEEEECCCCCCcE
Confidence 9999999999999999999999999999998888777778889999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++|+.++...+..+|+|++++|+||++++++++++|+++++ +++++.++......|..
T Consensus 167 ~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~ 246 (392)
T 3qhx_A 167 IADIAGIAQLGADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAV 246 (392)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCC
T ss_pred EecHHHHHHHHHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999888889999999999999999999998889999997 68889998888888999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
.+++.+|+++++++++..|++++.+++++++++|+++|.|.+|+||+++++|+|+++++|++|+|+|++|+|++
T Consensus 247 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~ 320 (392)
T 3qhx_A 247 PGPFDAYLTMRGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRA 320 (392)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976
No 7
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=100.00 E-value=5.4e-48 Score=397.53 Aligned_cols=308 Identities=35% Similarity=0.572 Sum_probs=285.6
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|+| .. ..+++++||||+++||.|++.+++.+.+.+...+|.|+|+++|...+|+++|++++|.++++++
T Consensus 5 ~~~t~~~~~~-~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~i~~ 80 (389)
T 3acz_A 5 DITTTLLHPK-GD---HVLHSHAYPIFQTSTFCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGAAGSAAF 80 (389)
T ss_dssp CHHHHHHSCS-SC---CSTTBSSCCBCCCSBBCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcceeEEecC-CC---CCCCCCCCCcccCCceecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 4789999999 32 2478999999999999999998888888776678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+||++|+..++.+++++||+|+++++.|++++..+...++..|+++.+++..|+++++++++++ +++|++|+|+||+|.
T Consensus 81 ~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 159 (389)
T 3acz_A 81 GSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPN-TKMVYLESPANPTCK 159 (389)
T ss_dssp SSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTT-EEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCCe
Confidence 9999999999999999999999999999998877666667789999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++|+.+....++.+++|++++|+||+++++++.++|++++++ +++++++.....+|..
T Consensus 160 ~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~ 239 (389)
T 3acz_A 160 VSDIKGIAVVCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSL 239 (389)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCC
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999988777788889999999999999999987779999998 9999998887778888
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
.+++.+|+++++++++..|++++.++++.++++|+++|.+.++.||+|+++|++.+++++++++|++++|++++
T Consensus 240 ~~~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~ 313 (389)
T 3acz_A 240 MAPMDAFLCARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS 313 (389)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS
T ss_pred CCHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999974
No 8
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=100.00 E-value=5.4e-47 Score=392.89 Aligned_cols=301 Identities=35% Similarity=0.603 Sum_probs=267.0
Q ss_pred CccccccccCCcCCCCCCC-CCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEE
Q 012321 152 SDGSLAIHAGERLGRGIVT-DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~-~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~ 230 (466)
+++|+++|+|...+ ..+ +++.+|||+++||.+++..+ ..+|.|+|+++|+..+||++|++++|.+++++
T Consensus 18 ~~~t~~~h~g~~~~--~~~~~~~~~pi~~stt~~~~~~~~--------~~~~~y~r~~~p~~~~l~~~la~~~g~~~~i~ 87 (403)
T 3cog_A 18 HFATQAIHVGQDPE--QWTSRAVVPPISLSTTFKQGAPGQ--------HSGFEYSRSGNPTRNCLEKAVAALDGAKYCLA 87 (403)
T ss_dssp THHHHHHHTTCCGG--GSTTCBSSCCBCCCSCBCCC----------------------CHHHHHHHHHHHHHHTCSEEEE
T ss_pred CcccEEEeCCCCCC--cCCCCCccCCeeccceeecCCccc--------cCCCcccCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 47899999997643 245 79999999999999987532 13588999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCc
Q 012321 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG 310 (466)
++||++|+.+++. ++++||+|+++++.|++++..+...++..|+++.+++..|+++|+++++++ +++|++|+|+||+|
T Consensus 88 ~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~-t~~v~~~~p~nptG 165 (403)
T 3cog_A 88 FASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPE-TKLVWIETPTNPTQ 165 (403)
T ss_dssp ESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTT-EEEEEEESSCTTTC
T ss_pred ECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCC
Confidence 9999999999998 899999999999999998877766778889999999988999999999874 99999999999999
Q ss_pred ccccHHHHHHHHHhcC-CEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhC
Q 012321 311 RCVDVKLVSDLCHKKG-AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG 388 (466)
Q Consensus 311 ~v~dl~~I~ela~~~g-illIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G 388 (466)
.+.|+++|.++|+++| +++|+|++|+.+....++.+++|++++|+||+++||+++++|+++++ ++++++++.....+|
T Consensus 166 ~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g 245 (403)
T 3cog_A 166 KVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLG 245 (403)
T ss_dssp CCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHC
T ss_pred eeeCHHHHHHHHHHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcC
Confidence 9999999999999999 99999999999887788888999999999999999998788999985 789999988888888
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 389 ~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
...+++.+|+++++++++..|++++.+|+..++++|+++|.|+++.||+|+++|++++++++++++|+|++|++++
T Consensus 246 ~~~~~~~~~~~~~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~ 321 (403)
T 3cog_A 246 AVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG 321 (403)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS
T ss_pred CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999975
No 9
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=2e-45 Score=382.80 Aligned_cols=309 Identities=30% Similarity=0.440 Sum_probs=274.7
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|+|...+ ..++++.+|||+++||.+++.++..+.+.++..+|.|+|+.+|..++|++++++++|.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~v~~~ 80 (421)
T 2ctz_A 3 FETLQLHAGYEPE--PTTLSRQVPIYPTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALATA 80 (421)
T ss_dssp HHHHHHHTTCCCC--TTTCBSSCCBCCCSCBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred cceeeeeCCCCCC--cCCCCccCCeeccceeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCCceEEec
Confidence 6799999997643 24789999999999999999988887776666789999999999999999999999998899999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe-CCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI-DPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v-d~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
||++|+..++.+++++||+|+++.+.|+++...+...++..|+++.++ +..|+++|+++++++ +++|++++|+||+|.
T Consensus 81 sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~n~~G~ 159 (421)
T 2ctz_A 81 SGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEK-TRAWWVESIGNPALN 159 (421)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTT-EEEEEEESSCTTTCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccC-CeEEEEECCCCCCCc
Confidence 999999999999999999999999999998776655566789999999 888999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCC-CCCCccchhccCCcEEEeccccccccccCceEEEEEeC--hHH----HHHHH---
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS--GKL----VTQIR--- 381 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~-a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~--~el----i~~l~--- 381 (466)
+.|+++|.++|+++|+++|+|+++ +.++..+++..++|++++|++|+++++++.+||+++.+ +++ ++.++
T Consensus 160 ~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~ 239 (421)
T 2ctz_A 160 IPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQ 239 (421)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCB
T ss_pred ccCHHHHHHHHHHcCCEEEEECCcccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhcccc
Confidence 999999999999999999999999 87766678888999999999999999988778888873 222 11221
Q ss_pred ----------------------H-HHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCC
Q 012321 382 ----------------------N-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 382 ----------------------~-~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL 438 (466)
. ....+|..++++.+|+++++++++..|++++.+++++++++|+++|.|+.|.||++
T Consensus 240 ~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~ 319 (421)
T 2ctz_A 240 PGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGL 319 (421)
T ss_dssp GGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTS
T ss_pred chhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCC
Confidence 0 12346778899999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHhhc-CCcceEEEEEece
Q 012321 439 KSHPEHHIATQQM-TGFGGVVSFEVCV 464 (466)
Q Consensus 439 ~s~p~~~l~~~~~-~g~Ggl~sfel~~ 464 (466)
+++|+|+++++++ ++.|+|++|++++
T Consensus 320 ~~~~~~~~~~~~~~~~~g~ivsf~l~~ 346 (421)
T 2ctz_A 320 PHHPHHDRAQKYFKGKPGAVLTFGLKG 346 (421)
T ss_dssp TTCTTHHHHHHHHTTCCCSEEEEEETT
T ss_pred CCCCCHHHHHHhccCCCceEEEEEeCC
Confidence 9999999999999 7999999999975
No 10
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=100.00 E-value=8.5e-45 Score=374.19 Aligned_cols=310 Identities=35% Similarity=0.546 Sum_probs=249.3
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|+|...+ ..++++.+|+|+++||.+++.++....+.++..+|.|+|+++|..+++++++++++|.++++++
T Consensus 9 ~~~t~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~~~i~~ 86 (398)
T 1gc0_A 9 GFATRAIHHGYDPQ--DHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLAL 86 (398)
T ss_dssp CHHHHHHHTTCCGG--GGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcCceeEeCCCCCC--CCCCCcCCCccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 47899999997642 3478999999999999999987766656666678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+||++|+..++.+++++||+|+++++.|+++...+...+...|+++.+++..|+++++++++++ +++|++++|+||+|.
T Consensus 87 ~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 165 (398)
T 1gc0_A 87 ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPA-TRVIYFESPANPNMH 165 (398)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTT-EEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCcc
Confidence 9999999999999999999999999999998877765567789999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHH-HHHHHHHH-hCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHV-LGG 389 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~-~l~~~~~~-~G~ 389 (466)
+.|+++|.++|+++|+++|+|++|+.+....++..++|+++.|+||+++++++.++|++++++++++ .++..... +|.
T Consensus 166 ~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~ 245 (398)
T 1gc0_A 166 MADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGA 245 (398)
T ss_dssp CCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCC
Confidence 9999999999999999999999998876666777899999999999999999877899999988776 56666666 778
Q ss_pred CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
.+++..+++++++++++..|++++.++++.+.++|+++|.+.++.||+|+++|+|+++.+++.+.|++++|++++
T Consensus 246 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (398)
T 1gc0_A 246 VLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG 320 (398)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC
Confidence 889999999999999999999999999999999999999999999999999999999999999999999999974
No 11
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=2.4e-43 Score=365.20 Aligned_cols=309 Identities=32% Similarity=0.553 Sum_probs=279.7
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|+|.. + ..++++.+|+|+++++.++..++..+.+.+..+.|.|++.++|+.++|++++++++|.++++++
T Consensus 7 ~~~t~~~~~~~~-~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~~~i~~ 83 (404)
T 1e5e_A 7 TPATACIHANPQ-K--DQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVAT 83 (404)
T ss_dssp CHHHHHHHSSCC-C--CTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CccceeeecCCC-C--CCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCCcEEEe
Confidence 468999999875 2 2367899999999999999987776666666678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
++|++|+..++.+++++||+|+++++.|+++...+...++..|+++.+++..|+++|+++++++ +++|++|+|+||||.
T Consensus 84 ~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-t~~v~l~~p~NptG~ 162 (404)
T 1e5e_A 84 SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPN-TKIVYFETPANPTLK 162 (404)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTT-EEEEEEESSCTTTCC
T ss_pred CChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCC-CcEEEEECCCCCCCc
Confidence 9999999999999999999999999999998776555567789999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHh-cCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHH-HHHHHHHHh-C
Q 012321 312 CVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVL-G 388 (466)
Q Consensus 312 v~dl~~I~ela~~-~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~-~l~~~~~~~-G 388 (466)
+.|+++|.++|++ +|+++|+|++|+.+....++.+|+|+++.|+||+++++++.++|++++++++++ +++.....+ |
T Consensus 163 v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g 242 (404)
T 1e5e_A 163 IIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITG 242 (404)
T ss_dssp CCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCC
T ss_pred ccCHHHHHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCC
Confidence 9999999999999 999999999999887667778899999999999999999766799999999888 887766666 7
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 389 ~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
...+++.+++++++++++..|++++.++++.++++|++++.+.++.||+|.++|++.+++.++++.|++++|++++
T Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~ 318 (404)
T 1e5e_A 243 SVISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS 318 (404)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC
Confidence 7789999999999999999999999999999999999999999999999999999999999999999999999864
No 12
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=7.6e-44 Score=367.86 Aligned_cols=300 Identities=33% Similarity=0.573 Sum_probs=271.0
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|.|...+ .++++.||||+++||.|++.+ ...++|.|+|+.++..++|+++|++++|.++.+++
T Consensus 7 ~~~t~~~~~~~~~~---~~~~~~~pi~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~lr~~la~~~g~~~~i~~ 76 (393)
T 1n8p_A 7 KFATKAIHAGEHVD---VHGSVIEPISLSTTFKQSSPA-------NPIGTYEYSRSQNPNRENLERAVAALENAQYGLAF 76 (393)
T ss_dssp CHHHHHHHTTCCCC---SSCCSSCCBCCCSBCCBSSSS-------SBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CccceEEecCCCcc---CCCCcCCCcccccceeecccc-------ccccCcceecCCChhHHHHHHHHHHHhCCCcEEEE
Confidence 46899999997642 478999999999999998742 12257999999999999999999999999899999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
+||++|+.+++. ++++||+|+++.+.|++++..+...++..|+++.+++..| ++|+++++++ |++|++++|+||+|.
T Consensus 77 ~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l~~~i~~~-t~lv~~~~~~nptG~ 153 (393)
T 1n8p_A 77 SSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDLPQLIKEN-TKLVWIETPTNPTLK 153 (393)
T ss_dssp SCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHHHHHSCSS-EEEEEECSSCTTTCC
T ss_pred CChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHHHHhcccC-ceEEEEECCCCCcce
Confidence 999999999999 8999999999999999887766666778899999998778 9999999874 999999999999999
Q ss_pred cccHHHHHHHHHhc----CCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHH
Q 012321 312 CVDVKLVSDLCHKK----GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHV 386 (466)
Q Consensus 312 v~dl~~I~ela~~~----gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~ 386 (466)
+.|+++|.++|+++ |+++|+|++|+.+...++..+|+|++++|+||+++++|+.++|+++++ ++++++++..+..
T Consensus 154 ~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~ 233 (393)
T 1n8p_A 154 VTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNA 233 (393)
T ss_dssp CCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHh
Confidence 99999999999999 999999999987665577778999999999999999998888999985 7899999888777
Q ss_pred hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEeCCCCCCCcchHHHHhhcCC-c-ceEEEEEec
Q 012321 387 LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK-VKRVHYPGLKSHPEHHIATQQMTG-F-GGVVSFEVC 463 (466)
Q Consensus 387 ~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~-V~~V~~PgL~s~p~~~l~~~~~~g-~-Ggl~sfel~ 463 (466)
+|..+++..+++++++++++..|++++.++++.+.++|+++|. +.++.||++.++|+|+++.+++++ . |++++|+++
T Consensus 234 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~ 313 (393)
T 1n8p_A 234 IGAIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIK 313 (393)
T ss_dssp HCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEES
T ss_pred cCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeC
Confidence 8888889999999999999999999999999999999999998 999999999999999999999877 7 999999997
Q ss_pred e
Q 012321 464 V 464 (466)
Q Consensus 464 ~ 464 (466)
+
T Consensus 314 ~ 314 (393)
T 1n8p_A 314 G 314 (393)
T ss_dssp S
T ss_pred C
Confidence 5
No 13
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=100.00 E-value=9e-43 Score=360.94 Aligned_cols=304 Identities=32% Similarity=0.513 Sum_probs=271.7
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012321 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~ 232 (466)
++|+++|+|...+ .+++++||||+++||.|++.+++.+.+. ...+|.|+|+.++..+++++++++++|.+++++++
T Consensus 3 ~~t~~~~~~~~~~---~~~~~~~pi~~s~~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~~~~~ 78 (412)
T 2cb1_A 3 YTTLAVLAGLPED---PHGAVGLPIYAVAAYGFKTLEEGQERFA-TGEGYVYARQKDPTAKALEERLKALEGALEAVVLA 78 (412)
T ss_dssp HHHHHHHTTCCCC---TTCCSSCCCCCCSBCCCSSHHHHHHHHH-HCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred ccceeeecCCCcC---CCCCcCCCccccceeecCChHHHHHHhc-cccCcCcCCCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999997642 4789999999999999999988877665 45679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
+|++|+..++.+++++||+|+++.+.|++++..+...++..|+++.+++. |+++|+++++++ +++|++++|+||+|.+
T Consensus 79 ~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~l~~~i~~~-~~~v~~~~~~n~~G~~ 156 (412)
T 2cb1_A 79 SGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP-EPEAVREALSAK-TRAVFVETVANPALLV 156 (412)
T ss_dssp SHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS-SHHHHHHHCCTT-EEEEEEESSCTTTCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-CHHHHHHHhccC-CeEEEEeCCCCCCccc
Confidence 99999999999999999999999999998877666557778999998886 499999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCC-CccchhccCCcEEEeccccccccccCceEEEEEeCh-----------------
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG----------------- 374 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t~a~~-~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~----------------- 374 (466)
.|+++|.++|+++|+++|+|++|+.+ ....+...+.|+++.|+||+++++++.+||+++.++
T Consensus 157 ~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 236 (412)
T 2cb1_A 157 PDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKG 236 (412)
T ss_dssp CCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC----
T ss_pred ccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccc
Confidence 99999999999999999999999887 666777889999999999999999877788888773
Q ss_pred ----------HHHHHHHHHH-HHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcc
Q 012321 375 ----------KLVTQIRNLH-HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 443 (466)
Q Consensus 375 ----------eli~~l~~~~-~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~ 443 (466)
++.++++... ...|..+.+..+|+++.+++++..+++++.++++++.++|.++|.|..|++|++.+||+
T Consensus 237 ~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~ 316 (412)
T 2cb1_A 237 QIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPA 316 (412)
T ss_dssp ---HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTT
T ss_pred cchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence 4555665544 44566778999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCcceEEEEEe
Q 012321 444 HHIATQQMTGFGGVVSFEV 462 (466)
Q Consensus 444 ~~l~~~~~~g~Ggl~sfel 462 (466)
|+++++++++.|++++|++
T Consensus 317 ~~~~~~~~~~~~~iv~~~~ 335 (412)
T 2cb1_A 317 HRNARKYLASGGPILTLDL 335 (412)
T ss_dssp HHHHHHHCSSSCSEEEEEC
T ss_pred HHHHHHhCCCCceEEEEEe
Confidence 9999999999999999998
No 14
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=7.1e-41 Score=344.28 Aligned_cols=310 Identities=37% Similarity=0.645 Sum_probs=275.3
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
++.|+++|+|...+ ..+.++.+|++.++++.++...+....+.+....|.|+|+.++..+++++++++++|.++.+++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~i~~ 85 (398)
T 2rfv_A 8 GFNTQIVHAGQQPD--PSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLAT 85 (398)
T ss_dssp CHHHHHHHTTCCCC--TTTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCceeEeecCCcCc--cCCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 46799999997642 2467899999999999999987766555555668999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
++|++|+..++.+++++||+|+++++.|+++...+...+...|+++..++..|+++++++++++ +++|++++|+||+|.
T Consensus 86 ~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 164 (398)
T 2rfv_A 86 ASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPE-TKVVYIETPANPTLS 164 (398)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTT-EEEEEEESSBTTTTB
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999998776655556779999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeChHHHH-HHHHHHHHh-CC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVL-GG 389 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~-~l~~~~~~~-G~ 389 (466)
+.|+++|.++|+++|+++|+|++|+.+....++.+++|+++.|+||+++++++.++|++++++++++ .++.....+ |.
T Consensus 165 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 244 (398)
T 2rfv_A 165 LVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGG 244 (398)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCC
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999877667778899999999999999998766799999998887 677666666 77
Q ss_pred CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
..+++.++.+++.++.+..|++++.++++.+.++|++++.+..+.||+|+++|++.+...++++.|++++|++++
T Consensus 245 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~ 319 (398)
T 2rfv_A 245 CMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG 319 (398)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 888999999999999999999999999999999999999999999999999999999999888899999999874
No 15
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1.9e-40 Score=339.35 Aligned_cols=302 Identities=32% Similarity=0.548 Sum_probs=270.1
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|+++|.|...+ ..++++.||||++++|.+++. +...+|.|+|+++|...+|+++|+++++.++.+++
T Consensus 4 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~ 73 (386)
T 1cs1_A 4 KQATIAVRSGLNDD--EQYGCVVPPIHLSSTYNFTGF--------NEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLT 73 (386)
T ss_dssp CHHHHHHHTTTTCC--TTTCBSSCCBCCCSBBCCSBT--------TBCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcceeEEecCCCcc--ccCCCCCCCccccceeecccc--------CCCCCcceeCCCCccHHHHHHHHHHHhCCCcEEEe
Confidence 36799999997542 347899999999999999764 22357999999999999999999999999899999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
++|++|+..++.+++++||+|++..+.|++++..+...++..|+++..++..|+++|+++++++ +++|++++|+||+|.
T Consensus 74 ~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 152 (386)
T 1cs1_A 74 NTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEK-PKLVLVESPSNPLLR 152 (386)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTC-CSEEEEECSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccC-CcEEEEeCCCCCCCc
Confidence 9999999999999999999999999999987776655567789999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++|..+....+...+.|+++.|++|++++++++++|++++++ +++++++.....++..
T Consensus 153 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~ 232 (386)
T 1cs1_A 153 VVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVT 232 (386)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCB
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999887666667789999999999999998876679999876 8889988877777777
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
.++..++.++++++++..++++..++++.+.++|++++.+..+.+|+|.++|++.+...++++.|++++|++++
T Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (386)
T 1cs1_A 233 GGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG 306 (386)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS
T ss_pred CCHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC
Confidence 88888888888999999999999999999999999999999999999999999999999888999999999874
No 16
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=6.2e-39 Score=339.10 Aligned_cols=300 Identities=34% Similarity=0.602 Sum_probs=266.6
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012321 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~ 231 (466)
+++|.++|.+... +..+++.+||++++++.+++. ...+.|.|+++++|.++++++++++++|.++++++
T Consensus 86 ~~~~~~i~l~~g~---~~~~~~~~~i~~a~~~~~~~~--------~~~~~~~Y~~~g~~~~~~l~~~la~~~g~~~~i~~ 154 (464)
T 1ibj_A 86 SVSTLLVNLDNKF---DPFDAMSTPLYQTATFKQPSA--------IENGPYDYTRSGNPTRDALESLLAKLDKADRAFCF 154 (464)
T ss_dssp CHHHHHTCCCCSS---CTTCCSSCCCCCCSBCCCSSS--------SCCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcCCeEEECCCCC---CCCCCCCccHHhhhhhhhhcc--------cccCCccccCCCCHHHHHHHHHHHHHhCCCeEEEE
Confidence 3678889987531 135678999999999987653 12346889999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~ 311 (466)
++|++|+.+++. ++++||+|+++++.|+++...+....+..|+++.+++..|+++|+++++++ +++|++++|+||+|.
T Consensus 155 ~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~-tk~v~l~~p~NptG~ 232 (464)
T 1ibj_A 155 TSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQ-TKLVWLESPTNPRQQ 232 (464)
T ss_dssp SSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSS-EEEEEECSSCTTTCC
T ss_pred CCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccC-ceEEEEeCCCCCCCE
Confidence 999999988775 789999999999999998766656677789999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHHHhCCC
Q 012321 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++|..+....++.+|+|++++|+||+++|++++++|++++++ +++++++......|..
T Consensus 233 v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~ 312 (464)
T 1ibj_A 233 ISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSG 312 (464)
T ss_dssp CCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCB
T ss_pred eecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999887766677789999999999999998777889999984 8888888877778888
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
++++.+|+++++++++..|++++.+++..++++|++++.+..+.|++|.++|++.++..+.+++|++++|++++
T Consensus 313 ~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~ 386 (464)
T 1ibj_A 313 LAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS 386 (464)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC
T ss_pred CCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC
Confidence 89999999999999999999999999999999999999999999999999999999998888899999999864
No 17
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=100.00 E-value=4.4e-35 Score=306.71 Aligned_cols=249 Identities=18% Similarity=0.269 Sum_probs=218.6
Q ss_pred cCCCccCCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCccchHHHH-------H
Q 012321 199 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFI-------E 267 (466)
Q Consensus 199 ~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~---~~SG~aAi~~al~all~pGD~VLv~~-~~y~~t~~~~-------~ 267 (466)
..+|.|+|. .+++||+++|+++|.+.+++ ++||++|+..++.+++++||+|++.+ +.|+++..++ .
T Consensus 65 ~~gy~y~~~---~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~ 141 (427)
T 3i16_A 65 SSGYGYGDI---GRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNM 141 (427)
T ss_dssp CCTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSS
T ss_pred CCCCCCCHH---HHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchH
Confidence 346777765 59999999999999998888 89999999999999999999999999 9999987665 2
Q ss_pred hhcccCCcEEEEeCC-----CCHHHHHHhccC-CCceEEEEeC----CCCCCcccccHHHHHHHHHh--cCCEEEEeCCC
Q 012321 268 TVLPKMGITATVIDP-----ADMEGLEAALNN-NNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTF 335 (466)
Q Consensus 268 ~~l~~~gi~v~~vd~-----~D~e~Le~ai~~-~~tklV~les----PsNPtG~v~dl~~I~ela~~--~gillIvD~t~ 335 (466)
..++..|+++.+++. .|+++|++++++ .++++|++++ |+||+|.+.|+++|+++|++ +|+++++|++|
T Consensus 142 ~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~ 221 (427)
T 3i16_A 142 GSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCY 221 (427)
T ss_dssp CCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred HHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 456677999999886 689999999982 2599999999 99999999999999999999 99999999999
Q ss_pred CCCC-ccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH--HHhCCCchH-HH-HHHHHHhhHHHHHHH
Q 012321 336 ATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNP-NA-AYLIIRGMKTLHLRV 410 (466)
Q Consensus 336 a~~~-~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~--~~~G~~ls~-~~-A~l~lrgL~tl~~R~ 410 (466)
+.+. ...+...|+|++++|+||+++|+++.+||+++++++++++++... ..+|..+++ +. +|+++++++++..|+
T Consensus 222 ~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~~~r~ 301 (427)
T 3i16_A 222 GEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHIS 301 (427)
T ss_dssp TTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHH
T ss_pred ccccccCCccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHHHHHHHHHHH
Confidence 9887 678888999999999999999999888999999999999988743 344444444 55 899999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEece
Q 012321 411 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVCV 464 (466)
Q Consensus 411 e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~~ 464 (466)
+++.+++..++++|++++. +| ||+ ++||+|++ |++|++++
T Consensus 302 ~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~~----------i~~i~l~~ 341 (427)
T 3i16_A 302 MEALKGAILCSRIMELAGF--EV-MPK-YDEKRSDI----------IQSIKFND 341 (427)
T ss_dssp HHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------CEEEECSS
T ss_pred HHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCccE----------EEEEEECC
Confidence 9999999999999999987 77 899 89998876 88888753
No 18
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=4.3e-34 Score=299.25 Aligned_cols=247 Identities=17% Similarity=0.253 Sum_probs=216.3
Q ss_pred cCCCccCCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCccchHHHHH-------
Q 012321 199 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------- 267 (466)
Q Consensus 199 ~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~---~~SG~aAi~~al~all~pGD~VLv~~-~~y~~t~~~~~------- 267 (466)
..+|.|+|+ .+++||+++++++|.+.+++ ++||++|+.+++.++++|||+|++.+ +.|+++..++.
T Consensus 66 ~~gy~Y~~~---g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~ 142 (427)
T 3hvy_A 66 SSGYGYNDI---GRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKV 142 (427)
T ss_dssp CCTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCS
T ss_pred CcCCCCCch---hHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhh
Confidence 346777775 48999999999999999998 89999999999999999999999999 99998876552
Q ss_pred hhcccCCcEEEEeCC----CCHHHHHHhcc--CCCceEEEEeC----CCCCCcccccHHHHHHHHHh--cCCEEEEeCCC
Q 012321 268 TVLPKMGITATVIDP----ADMEGLEAALN--NNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTF 335 (466)
Q Consensus 268 ~~l~~~gi~v~~vd~----~D~e~Le~ai~--~~~tklV~les----PsNPtG~v~dl~~I~ela~~--~gillIvD~t~ 335 (466)
..++..|+++..++. .|+++|+++++ + +||+|++++ |+||+|.+.|+++|+++|++ +|+++++|++|
T Consensus 143 ~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~-~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~ 221 (427)
T 3hvy_A 143 GSLREYGVKYKMVDLKDGKVDINTVKEELKKDD-SIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCY 221 (427)
T ss_dssp CCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCT-TEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred hHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCC-CCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence 456678999999987 79999999998 5 599999999 99999999999999999999 89999999999
Q ss_pred CCCC-ccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchH--HHHHHHHHhhHHHHHHH
Q 012321 336 ATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNP--NAAYLIIRGMKTLHLRV 410 (466)
Q Consensus 336 a~~~-~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~--~~A~l~lrgL~tl~~R~ 410 (466)
+.+. ...|...|+|++++|+||+++|+++.+||+++++++++++++.... .+|..+++ ..++++++++++++.|+
T Consensus 222 ~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~~r~ 301 (427)
T 3hvy_A 222 GEFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMAPHVT 301 (427)
T ss_dssp CTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHH
T ss_pred cccccCCCCcccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHHHHHH
Confidence 9887 6788889999999999999999988889999999999999987543 33322222 34899999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEec
Q 012321 411 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVC 463 (466)
Q Consensus 411 e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~ 463 (466)
+++.+|+..++++|++++. +| ||+ +++|.|++ +++|+++
T Consensus 302 ~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~l----------i~~~~l~ 340 (427)
T 3hvy_A 302 IEAVKGAVFCARIMELAGF--DV-LPK-YNDKRTDI----------IQAIKFN 340 (427)
T ss_dssp HHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------EEEEECS
T ss_pred HHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCceE----------EEEEeCC
Confidence 9999999999999999986 77 898 88888876 7888775
No 19
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=100.00 E-value=1.2e-33 Score=294.29 Aligned_cols=245 Identities=16% Similarity=0.205 Sum_probs=212.6
Q ss_pred cCCCccCCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCccchHHHHH------h
Q 012321 199 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------T 268 (466)
Q Consensus 199 ~~~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~---~~SG~aAi~~al~all~pGD~VLv~~-~~y~~t~~~~~------~ 268 (466)
..+|.|+| +.++.||+++|+++|.+.+++ ++||++|+.+++.+++++||+|++++ +.|..+...+. .
T Consensus 51 ~~~~~y~~---~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~ 127 (409)
T 3jzl_A 51 STGYGYDD---EGRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQG 127 (409)
T ss_dssp CCTTCTTC---HHHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSS
T ss_pred CcCCCCCh---hHHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhh
Confidence 34676765 458999999999999999988 88999999999999999999999998 99998776553 4
Q ss_pred hcccCCcEEEEeCC-----CCHHHHHHhccCCCceEEEEeC----CCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCC
Q 012321 269 VLPKMGITATVIDP-----ADMEGLEAALNNNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFAT 337 (466)
Q Consensus 269 ~l~~~gi~v~~vd~-----~D~e~Le~ai~~~~tklV~les----PsNPtG~v~dl~~I~ela~~--~gillIvD~t~a~ 337 (466)
.++..|+++.+++. .|+++|+++++++ |++|++++ |+||+|.+.|+++|+++|++ +|+++++|++|+.
T Consensus 128 ~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~-tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~ 206 (409)
T 3jzl_A 128 SLKDFHIGYSSVPLLENGDVDFPRIAKKMTPK-TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGE 206 (409)
T ss_dssp CTGGGTCEEEECCCCTTSCCCHHHHHHHCCTT-EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT
T ss_pred HHHHcCCEEEEeCCCCCCCcCHHHHHHhccCC-CeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccc
Confidence 56778999999987 6999999999874 99999999 99999999999999999999 9999999999998
Q ss_pred CC-ccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHH------hCCCchHHHHHHHHHhhHHHHHHH
Q 012321 338 PL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV------LGGALNPNAAYLIIRGMKTLHLRV 410 (466)
Q Consensus 338 ~~-~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~------~G~~ls~~~A~l~lrgL~tl~~R~ 410 (466)
++ ...+...|+|++++|+||+++|+++.+||+++++++++++++..... .|..+. .++++++++++++.|+
T Consensus 207 ~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~--~~~~~l~gl~~~~~r~ 284 (409)
T 3jzl_A 207 FVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLY--SLLEMYQGFFLAPHVT 284 (409)
T ss_dssp TTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT--CHHHHHHHHHHHHHHH
T ss_pred ccccCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHH--HHHHHHHHHhhHHHHH
Confidence 87 57788899999999999999999988899999999999998875432 222222 2566899999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhhcCCcceEEEEEec
Q 012321 411 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVC 463 (466)
Q Consensus 411 e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~~~g~Ggl~sfel~ 463 (466)
+++.+++..++++|++++. +| ||+ ++||+|++ |++|+++
T Consensus 285 ~~~~~~a~~la~~L~~~g~--~v-~p~-~~~~~~~~----------i~~i~l~ 323 (409)
T 3jzl_A 285 AQAIKGARFTAAMLAEFGV--EA-DPV-WDAPRTDL----------IQSVSFH 323 (409)
T ss_dssp HHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------CCEEECS
T ss_pred HHHHHHHHHHHHHHHhCCC--cc-cCC-CCCCCccE----------EEEEEeC
Confidence 9999999999999999987 67 888 88888775 7777764
No 20
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=100.00 E-value=5.3e-33 Score=277.13 Aligned_cols=249 Identities=36% Similarity=0.592 Sum_probs=223.8
Q ss_pred HHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhcc
Q 012321 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALN 293 (466)
Q Consensus 214 ~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~ 293 (466)
+|++++++++|.++.+++++|++|+..++.+++++||+|+++.+.|+++...+...++..|+++.+++..|+++++++++
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~ 81 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK 81 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc
Confidence 68999999999999999999999999999999999999999999999977665544556799999999889999999998
Q ss_pred CCCceEEEEeCCCCCCcccccHHHHHHHHHh-cCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCceEEEEEe
Q 012321 294 NNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG 372 (466)
Q Consensus 294 ~~~tklV~lesPsNPtG~v~dl~~I~ela~~-~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg 372 (466)
++ +++|++++|+||+|.+.|+++|.++|++ +|+++|+|++|+.+....++..+.|+++.|+||+++++++.++|++++
T Consensus 82 ~~-~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~~~r~~G~~~~ 160 (331)
T 1pff_A 82 PN-TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHTDVVAGLVCS 160 (331)
T ss_dssp TT-EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSSSSCCCEEEEE
T ss_pred CC-CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCCCCceEEEEEe
Confidence 74 9999999999999999999999999999 999999999998765555667889999999999999988655899999
Q ss_pred Ch-HHHHHHHHHHHH-hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCCCCCCCcchHHHHhh
Q 012321 373 SG-KLVTQIRNLHHV-LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQ 450 (466)
Q Consensus 373 ~~-eli~~l~~~~~~-~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~PgL~s~p~~~l~~~~ 450 (466)
++ +++++++..... .+...++..++.+.++++++..|+++..++.+.+.++|++++.+..+.+++|.+.|++.+...+
T Consensus 161 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~ 240 (331)
T 1pff_A 161 RADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQ 240 (331)
T ss_dssp CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhh
Confidence 98 898888876665 5667888888888889999999999999999999999999999999999999999999999988
Q ss_pred cCCcceEEEEEec
Q 012321 451 MTGFGGVVSFEVC 463 (466)
Q Consensus 451 ~~g~Ggl~sfel~ 463 (466)
..+.|++++|+++
T Consensus 241 ~~~~~~~~~~~~~ 253 (331)
T 1pff_A 241 MKMFGSMIAFDVD 253 (331)
T ss_dssp CSSCCSEEEEECS
T ss_pred CCCCceEEEEEEC
Confidence 8889999999875
No 21
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.95 E-value=9.1e-28 Score=251.44 Aligned_cols=232 Identities=18% Similarity=0.223 Sum_probs=192.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCccchHHHHH------hhcccCCcEE
Q 012321 208 GNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------TVLPKMGITA 277 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~---~~SG~aAi~~al~all~pGD~VLv~~-~~y~~t~~~~~------~~l~~~gi~v 277 (466)
+++.+++|++++++++|.+..++ ++||++|+..++.+++++||+|++.+ +.|+.+...+. ..++..|+++
T Consensus 63 ~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~ 142 (431)
T 3ht4_A 63 DDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGY 142 (431)
T ss_dssp SCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEE
T ss_pred ChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEE
Confidence 35679999999999999987776 88999999999999999999999998 99998765542 3456689999
Q ss_pred EEeCC-----CCHHHHHHhccCCCceEEEEeC-CCCCC---cccccHHHHHHHHHh--cCCEEEEeCCCCCCC-ccchhc
Q 012321 278 TVIDP-----ADMEGLEAALNNNNVSLFFTES-PTNPF---LRCVDVKLVSDLCHK--KGAIVCIDGTFATPL-NQKALS 345 (466)
Q Consensus 278 ~~vd~-----~D~e~Le~ai~~~~tklV~les-PsNPt---G~v~dl~~I~ela~~--~gillIvD~t~a~~~-~~~pl~ 345 (466)
.+++. .|+++|+++++++ +++|++++ |+||+ |.+.|+++|+++|++ +|+++|+|++|+.+. ..++..
T Consensus 143 ~~v~~~~~~~~d~e~l~~~l~~~-tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~ 221 (431)
T 3ht4_A 143 NAVPLTEGGLVDFEAVAAAIHSN-TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCH 221 (431)
T ss_dssp EECCBCTTSSBCHHHHHHHCCTT-EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGG
T ss_pred EEeCCCCCCCcCHHHHHhhcCCC-CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCccc
Confidence 99886 4899999999874 99999995 55555 555678999999999 999999999999876 367888
Q ss_pred cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHH--hCCCchH--HHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 012321 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNP--NAAYLIIRGMKTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 346 ~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~--~G~~ls~--~~A~l~lrgL~tl~~R~e~~~~na~~La 421 (466)
.|+|+++.|++|+++|+....||+++++++++++++..... +|....+ ..++++++++++++.|++++.+++..++
T Consensus 222 ~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~l~ 301 (431)
T 3ht4_A 222 VGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTA 301 (431)
T ss_dssp TTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhHHHHHHHHHHHHHHHH
Confidence 89999999999999997666789999999999998875543 2322222 2367788999999999999999999999
Q ss_pred HHHHcCCCcEEEeCCCCCCCcch
Q 012321 422 KILEAHPKVKRVHYPGLKSHPEH 444 (466)
Q Consensus 422 ~~L~~~p~V~~V~~PgL~s~p~~ 444 (466)
++|++++. .| +|+ ++++.+
T Consensus 302 ~~L~~~g~--~v-~p~-~~~~~~ 320 (431)
T 3ht4_A 302 AFLEKLGM--NT-SPA-WNAPRT 320 (431)
T ss_dssp HHHHHHTC--CE-ESC-TTSCCS
T ss_pred HHHHhCcC--Ee-cCC-CCCCCc
Confidence 99999875 45 676 555543
No 22
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.93 E-value=2.3e-24 Score=217.97 Aligned_cols=219 Identities=12% Similarity=0.169 Sum_probs=171.7
Q ss_pred chhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 209 NPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g---~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
.+...+|++.++++++ .++++++++|++|+..++.+++++||+|+++.+.|.+....+ ...|.++..++.
T Consensus 62 ~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~~ 137 (375)
T 3op7_A 62 IEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIP----KSLGAEVDLWQIEEE 137 (375)
T ss_dssp TTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHH----HHTTCEEEEEEEEGG
T ss_pred CCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHH----HHcCCEEEEEecccc
Confidence 4456799999999874 267888888889999999999999999999999999866443 345766666542
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc---c-hhccCCcEE
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---K-ALSLGADLV 351 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~---~-pl~~gaDiv 351 (466)
.|+++|+++++++ +++|++++|+||+|.+.| +++|.++|++||+++|+|++|+..... . ....+.+++
T Consensus 138 ~~~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~ 216 (375)
T 3op7_A 138 NGWLPDLEKLRQLIRPT-TKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIA 216 (375)
T ss_dssp GTTEECHHHHHHHCCTT-CCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEE
T ss_pred CCCCCCHHHHHHhhccC-CeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEE
Confidence 3899999999874 999999999999999999 999999999999999999998763321 1 112356799
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH----HHHHHHHHHHHHHHHHHHcC
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH----LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~----~R~e~~~~na~~La~~L~~~ 427 (466)
+.|+||.++.+| .++|++++++++++.++..+...+...++..++++...++..+ .+.++..++++.+.+.|+++
T Consensus 217 ~~s~sK~~~~~G-~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 295 (375)
T 3op7_A 217 VNSLSKTYSLPG-IRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEE 295 (375)
T ss_dssp EEESSSSSSCGG-GCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EeEChhhcCCcc-cceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999998666 4579999999999999877766665666666665555554433 33444578888999999998
Q ss_pred CCcEEE
Q 012321 428 PKVKRV 433 (466)
Q Consensus 428 p~V~~V 433 (466)
|.+..+
T Consensus 296 ~~~~~~ 301 (375)
T 3op7_A 296 PLVSYI 301 (375)
T ss_dssp TTEEEC
T ss_pred CCceEe
Confidence 877654
No 23
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.92 E-value=2.5e-23 Score=210.99 Aligned_cols=213 Identities=11% Similarity=0.099 Sum_probs=172.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~ 287 (466)
..+...+|++++++++|.++.+++++|++|+..++.+++++||+|+++.+.|+.+... +...|.++..++..|+++
T Consensus 82 ~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~ 157 (384)
T 1bs0_A 82 YSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEA----ASLSPSQLRRFAHNDVTH 157 (384)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH----HHTSSSEEEEECTTCHHH
T ss_pred ChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHHH----HHHcCCCEEEeCCCCHHH
Confidence 3478899999999999998999999999999999999999999999999999976543 344688888898889999
Q ss_pred HHHhccCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-------chhccCCcEEEeccccc
Q 012321 288 LEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALSLGADLVLHSATKF 358 (466)
Q Consensus 288 Le~ai~~~--~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~-------~pl~~gaDivv~S~sK~ 358 (466)
|++++++. ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+... .....+.|+++.|+||+
T Consensus 158 l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~ 237 (384)
T 1bs0_A 158 LARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKG 237 (384)
T ss_dssp HHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSST
T ss_pred HHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccch
Confidence 99998753 3799999999999999999999999999999999999999765421 11223589999999999
Q ss_pred cccccCceEEEEEeChHHHHHHHHHHHH--hCCCchHHHHHHHHHhhH-----HHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 359 IGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 359 lgG~gdv~gG~vvg~~eli~~l~~~~~~--~G~~ls~~~A~l~lrgL~-----tl~~R~e~~~~na~~La~~L~~~p 428 (466)
++.+ ||+++++++++++++..... .+...++..+..+...++ .++.+.++..++++.+.+.|++++
T Consensus 238 ~~~~----GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 310 (384)
T 1bs0_A 238 FGVS----GAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP 310 (384)
T ss_dssp TSSC----CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred hhcc----CcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 9854 49999999999888765322 223456665554444443 344667778889999999999873
No 24
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.92 E-value=4.6e-24 Score=217.74 Aligned_cols=227 Identities=15% Similarity=0.163 Sum_probs=174.6
Q ss_pred CccCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCccchHHHHHhhcccCC
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~al----l~pGD~VLv~~~~y~~t~~~~~~~l~~~g 274 (466)
+.|+....+...++++++++++|. ++.+++++|++|+.+++.++ +++||+|+++.++|+++...+.......|
T Consensus 64 ~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g 143 (420)
T 1t3i_A 64 HQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTG 143 (420)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcC
Confidence 345433356788999999999998 67888888899999999999 89999999999999996543434445567
Q ss_pred cEEEEeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-chhccCC
Q 012321 275 ITATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGA 348 (466)
Q Consensus 275 i~v~~vd~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~-~pl~~ga 348 (466)
+++..++. .|+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+... .....+.
T Consensus 144 ~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~ 222 (420)
T 1t3i_A 144 AVLKFVQLDEQESFDLEHFKTLLSEK-TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDC 222 (420)
T ss_dssp CEEEEECBCTTSSBCHHHHHHHCCTT-EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTC
T ss_pred cEEEEeccCCCCCcCHHHHHHhhCCC-ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCC
Confidence 88877764 5899999999874 999999999999999999999999999999999999998865432 3345689
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHHHH--------------------hCCCchHHHHHHH----HHhhH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------------------LGGALNPNAAYLI----IRGMK 404 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~--------------------~G~~ls~~~A~l~----lrgL~ 404 (466)
|+++.|+||.++++| +|+++++++++++++..... +....++..++++ ++.++
T Consensus 223 di~~~s~sK~~~~~g---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 299 (420)
T 1t3i_A 223 DWLVASGHKMCAPTG---IGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT 299 (420)
T ss_dssp SEEEEEGGGTTSCTT---CEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEehhhhcCCCc---eEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHH
Confidence 999999999887765 68999999988877543321 1111223333332 23333
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHcCCCcEE
Q 012321 405 T--LHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 405 t--l~~R~e~~~~na~~La~~L~~~p~V~~ 432 (466)
. ++.+.++..++++.+.+.|++.|+++.
T Consensus 300 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 329 (420)
T 1t3i_A 300 DLGMENIHNYEVELTHYLWQGLGQIPQLRL 329 (420)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 2 455667788899999999999887643
No 25
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=7.2e-24 Score=216.30 Aligned_cols=227 Identities=15% Similarity=0.112 Sum_probs=170.2
Q ss_pred CCccCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCccchHHHHHhhcccCCc
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~al---l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi 275 (466)
.|.|++...+..+++++++++++|.+ +.+++++|++++.+++.++ +++||+|+++.+.|+++...+....+..|.
T Consensus 60 ~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~ 139 (406)
T 3cai_A 60 AHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGA 139 (406)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCC
Confidence 35555445678899999999999974 5666677779999998887 789999999999999876555443344588
Q ss_pred EEEEeCCC------CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCC
Q 012321 276 TATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGA 348 (466)
Q Consensus 276 ~v~~vd~~------D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~ga 348 (466)
++.+++.. |+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .....++.
T Consensus 140 ~v~~v~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~ 218 (406)
T 3cai_A 140 KVKWAEVDIETGELPTWQWESLISKS-TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDA 218 (406)
T ss_dssp EEEEECCCTTTCCCCGGGHHHHCCTT-EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCC
T ss_pred eEEEEecCcccCCcCHHHHHHHhCCC-ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCC
Confidence 88887654 889999999874 99999999999999999999999999999999999999986543 33334689
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHHHH--------h-CCCchHHHHH---HHHHhhH------------
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------L-GGALNPNAAY---LIIRGMK------------ 404 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~--------~-G~~ls~~~A~---l~lrgL~------------ 404 (466)
|+++.|++|++++ + +||+++++++++++++..... + .++.+..... .+++.+.
T Consensus 219 d~~~~s~~K~~g~-~--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 295 (406)
T 3cai_A 219 DVVTVNAHAWGGP-P--IGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRE 295 (406)
T ss_dssp SEEEEEGGGGTSC-S--CEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHH
T ss_pred CEEEeehhhhcCC-C--cCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhh
Confidence 9999999998763 3 333999999888776543211 1 2223332221 1222222
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHcCCCcE
Q 012321 405 ----TLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 405 ----tl~~R~e~~~~na~~La~~L~~~p~V~ 431 (466)
.++...++..++++.+.+.|++.|+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 326 (406)
T 3cai_A 296 RLAVSMQSADAYLNRVFDYLMVSLRSLPLVM 326 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 245566677788999999999988763
No 26
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.92 E-value=2.8e-23 Score=210.84 Aligned_cols=213 Identities=17% Similarity=0.159 Sum_probs=172.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~ 287 (466)
..+...+|++++++++|.++.+++++|++|+..++.+++++||+|+++.+.|+.+.. .++..|.++..++..|+++
T Consensus 86 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~ 161 (399)
T 3tqx_A 86 TQTIHKELEKDISEFLGTDDTILYSSCFDANGGLFETLLGPEDAIISDELNHASIID----GIRLCKAQRYRYKNNAMGD 161 (399)
T ss_dssp CBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHH----HHHSCCSEEEEECTTCTTH
T ss_pred CchHHHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHHH----HHHHcCCceeEeCCCCHHH
Confidence 467789999999999999999999999999999999999999999999999998654 3445688888888888899
Q ss_pred HHHhccCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc-------hhc--cCCcEEEe
Q 012321 288 LEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------ALS--LGADLVLH 353 (466)
Q Consensus 288 Le~ai~~~-----~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~-------pl~--~gaDivv~ 353 (466)
|++.+++. ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.++... ... .+.|+++.
T Consensus 162 l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~ 241 (399)
T 3tqx_A 162 LEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTG 241 (399)
T ss_dssp HHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEE
T ss_pred HHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEe
Confidence 99888651 48999999999999999999999999999999999999996543211 111 25799999
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHH----HHHHHHHHHHHHHHHHHHHHcC
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~t----l~~R~e~~~~na~~La~~L~~~ 427 (466)
|+||+++|. .||++++++++++.++.... .+....++..+..++..++. +....++..++++.+.+.|+++
T Consensus 242 s~sK~~~g~---~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (399)
T 3tqx_A 242 TLGKALGGA---SGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL 318 (399)
T ss_dssp ESSSSSCSS---CCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHhcccC---ceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 999999944 36999999999998887533 23445666655544444443 4566677888889999999875
No 27
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.92 E-value=1.2e-23 Score=210.15 Aligned_cols=216 Identities=19% Similarity=0.216 Sum_probs=165.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----C
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 283 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----~ 283 (466)
.++...+|++++++++|.++.+++++|++|+.+++.+++++||+|+++++.|..++... ......|+++.+++. .
T Consensus 36 ~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 114 (347)
T 1jg8_A 36 EDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVG-AMAVLSGVMPHPVPGKNGAM 114 (347)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTT-HHHHHTCCEEEEECEETTEE
T ss_pred CChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhcccc-chhhccCeEEEEecCCCCcc
Confidence 57889999999999999999999999999999999999999999999999997654211 112335666666521 3
Q ss_pred CHHHHHHhccC-----CCceEEEEeCCCCCC-ccccc---HHHHHHHHHhcCCEEEEeCCCCC------CCccchhccCC
Q 012321 284 DMEGLEAALNN-----NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGA 348 (466)
Q Consensus 284 D~e~Le~ai~~-----~~tklV~lesPsNPt-G~v~d---l~~I~ela~~~gillIvD~t~a~------~~~~~pl~~ga 348 (466)
|+++|++++++ .++++|++++|+||| |.+.+ +++|.++|+++|+++|+|+++.. +.....+..+.
T Consensus 115 d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 194 (347)
T 1jg8_A 115 DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYA 194 (347)
T ss_dssp CHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTC
T ss_pred CHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccc
Confidence 89999999975 149999999999999 99876 57889999999999999998632 22222333468
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc--hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHc
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l--s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~ 426 (466)
|.++.|+||+++++ +||+++++++++++++.++..++... ....++++..+++....++++..++++.+.+.|++
T Consensus 195 d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 271 (347)
T 1jg8_A 195 DSVMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKE 271 (347)
T ss_dssp SEEEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHH
T ss_pred cEEEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98889999999875 46678889999998887777666443 44555555556665444566666788888888877
Q ss_pred C
Q 012321 427 H 427 (466)
Q Consensus 427 ~ 427 (466)
+
T Consensus 272 ~ 272 (347)
T 1jg8_A 272 I 272 (347)
T ss_dssp H
T ss_pred c
Confidence 5
No 28
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.92 E-value=1.5e-23 Score=215.17 Aligned_cols=223 Identities=18% Similarity=0.230 Sum_probs=169.6
Q ss_pred CCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhcc----CCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 206 RYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all~----pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
+...+..+++++++++++|.+ +++++++|++|+.+++.+++. +||+|+++.+.|++....+.. +...|+++..
T Consensus 64 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~~~~g~~~~~ 142 (423)
T 3lvm_A 64 WQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQ-LEREGFEVTY 142 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHH-HHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHH-HHHcCCEEEE
Confidence 334566789999999999985 788888889999999988874 799999999999987655533 3556888888
Q ss_pred eCCC-----CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEe
Q 012321 280 IDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLH 353 (466)
Q Consensus 280 vd~~-----D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~ 353 (466)
++.. |+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|++||+|++++.+.. ......+.|+++.
T Consensus 143 v~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~ 221 (423)
T 3lvm_A 143 LAPQRNGIIDLKELEAAMRDD-TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSF 221 (423)
T ss_dssp ECCCTTSCCCHHHHHHHCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEE
T ss_pred eccCCCCccCHHHHHHhcCCC-cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEe
Confidence 8753 899999999874 99999999999999999999999999999999999999876544 3444568899999
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHH-------HhCCCchHHHHHHH---HHhh-HHHHHHHHHHHHHHHHHHH
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLI---IRGM-KTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~-------~~G~~ls~~~A~l~---lrgL-~tl~~R~e~~~~na~~La~ 422 (466)
|+||++++++ .|++++++++++.++.... ....+.+......+ ++.+ +.++...++..++++.+.+
T Consensus 222 s~sK~~g~~g---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~ 298 (423)
T 3lvm_A 222 SGHKIYGPKG---IGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWN 298 (423)
T ss_dssp ESTTTTSCSS---CEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHhcCCCC---eEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887765 5788888766555433221 11122233322222 2222 2245667778888999999
Q ss_pred HHHcCCCcEEE
Q 012321 423 ILEAHPKVKRV 433 (466)
Q Consensus 423 ~L~~~p~V~~V 433 (466)
.|+++|.+..+
T Consensus 299 ~L~~~~~~~~~ 309 (423)
T 3lvm_A 299 GIKDIEEVYLN 309 (423)
T ss_dssp HHTTSTTEEEE
T ss_pred HHhcCCCEEEe
Confidence 99988877544
No 29
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.92 E-value=2.9e-23 Score=211.68 Aligned_cols=212 Identities=18% Similarity=0.180 Sum_probs=173.9
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~L 288 (466)
.+...+|+++|++++|.++.+++++|++|+..++.+++++||+|+++.+.|+..... +...|+++..++..|+++|
T Consensus 89 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l 164 (401)
T 1fc4_A 89 QDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDG----VRLCKAKRYRYANNDMQEL 164 (401)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHH----HHTSCSEEEEECTTCHHHH
T ss_pred cHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHH----HHHcCCceEEECCCCHHHH
Confidence 688999999999999998899999999999999999999999999999999876543 4467888888888899999
Q ss_pred HHhccCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---------chhccCCcEEEec
Q 012321 289 EAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLHS 354 (466)
Q Consensus 289 e~ai~~~-----~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~---------~pl~~gaDivv~S 354 (466)
++++++. ++++|++++|+||||.+.++++|.++|+++|+++|+|++|+.++.. ..+..+.|+++.|
T Consensus 165 ~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s 244 (401)
T 1fc4_A 165 EARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGT 244 (401)
T ss_dssp HHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEE
T ss_pred HHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEec
Confidence 9988641 4899999999999999999999999999999999999999643321 1112357999999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~tl---~~R~e~~~~na~~La~~L~~~ 427 (466)
+||+++++. ||++++++++++.++.... .+....++..++.+...++.+ ..+.++..++++.+.+.|+++
T Consensus 245 ~sK~~~~~~---gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (401)
T 1fc4_A 245 LGKALGGAS---GGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA 319 (401)
T ss_dssp SSSTTCSSS---CEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhccCCC---CEEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 999995443 4999999999998876542 235566777776666666655 466778888999999999886
No 30
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.92 E-value=4.5e-24 Score=214.59 Aligned_cols=220 Identities=14% Similarity=0.226 Sum_probs=166.7
Q ss_pred ccCCCCchhHHHHHHH-HHhhhCCCcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 203 EYGRYGNPTTVVVEEK-MSALEGAESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 203 ~Y~R~~~p~~~~Lee~-lA~l~g~e~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
.++++..+...+++++ +++++|.+ .+++++| ++|+..++.+++++||+|++++++|.+.... +...|+++..+
T Consensus 46 ~~~~~~~~~~~~l~~~~la~~~~~~-~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v 120 (371)
T 2e7j_A 46 RLDEIKTPPIHDFIHNQLPKFLGCD-VARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVA----AERAGLNIALV 120 (371)
T ss_dssp -------CCHHHHHHTHHHHHTTSS-EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH----HHHTTCEEEEE
T ss_pred cchhhHHHHHHHHHHHHHHHHcCCC-EEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHH----HHHcCCeEEEe
Confidence 3455567889999999 99999988 5555555 7999999999999999999999999987644 34568888887
Q ss_pred C--CC-----CHHHHHHhcc-----CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccC
Q 012321 281 D--PA-----DMEGLEAALN-----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLG 347 (466)
Q Consensus 281 d--~~-----D~e~Le~ai~-----~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~g 347 (466)
+ .. |+++|+++++ + ++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+.. .....++
T Consensus 121 ~~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~ 199 (371)
T 2e7j_A 121 PKTDYPDYAITPENFAQTIEETKKRG-EVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIG 199 (371)
T ss_dssp CCCCTTTCCCCHHHHHHHHHHHTTTS-CEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHT
T ss_pred ecccCCCCCcCHHHHHHHHHhhcccC-CeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcC
Confidence 7 43 7999999997 5 499999999999999999999999999999999999999987654 3344568
Q ss_pred CcEEEeccccccccccCceEEEEEeChHHHHH-HHHHHH--Hh-----CCCchHHHHHHHHHhhHHHH-HHHHHH--HHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHH--VL-----GGALNPNAAYLIIRGMKTLH-LRVQQQ--NST 416 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~-l~~~~~--~~-----G~~ls~~~A~l~lrgL~tl~-~R~e~~--~~n 416 (466)
.|+++.|+||+++++. .+|+++++++++++ ++.... .. ....++...+.+...++.+. ...++. .++
T Consensus 200 ~di~~~s~sK~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 277 (371)
T 2e7j_A 200 ADFIVGSGHKSMAASG--PIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEK 277 (371)
T ss_dssp CSEEEEEHHHHSSCCS--SCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHH
T ss_pred CCEEEecCCcCCCCCC--CcEEEEEechhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999998875 56999999888776 654332 11 22334443433334444444 344556 788
Q ss_pred HHHHHHHHHcCCCcE
Q 012321 417 ALRMAKILEAHPKVK 431 (466)
Q Consensus 417 a~~La~~L~~~p~V~ 431 (466)
++++.+.|+++ ++.
T Consensus 278 ~~~l~~~L~~~-~~~ 291 (371)
T 2e7j_A 278 ARRFAAEMEKL-GIK 291 (371)
T ss_dssp HHHHHHHHHHT-TCE
T ss_pred HHHHHHHHHHc-CcE
Confidence 89999999987 554
No 31
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.92 E-value=1.6e-22 Score=204.79 Aligned_cols=227 Identities=19% Similarity=0.175 Sum_probs=172.1
Q ss_pred CCccCCCCchhHHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g----~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~ 276 (466)
.+.|+....+..+++++.+++.+| .++.+++++|++|+.+++.+++++||+|+++.+.|.+....+ ...|.+
T Consensus 57 ~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~----~~~g~~ 132 (391)
T 3dzz_A 57 AFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVI----EGNGRR 132 (391)
T ss_dssp CCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHH----HHTTCE
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHH----HHcCCE
Confidence 456776666778888888888877 356777777789999999999999999999999999866443 346777
Q ss_pred EEEeCC--------CCHHHHHHhccCCCceEEEEeCCCCCCccc---ccHHHHHHHHHhcCCEEEEeCCCCCCCc-----
Q 012321 277 ATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----- 340 (466)
Q Consensus 277 v~~vd~--------~D~e~Le~ai~~~~tklV~lesPsNPtG~v---~dl~~I~ela~~~gillIvD~t~a~~~~----- 340 (466)
+..++. .|+++|++++++.++++|++++|+||||.+ .++++|.++|+++|+++|+|++|+....
T Consensus 133 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 212 (391)
T 3dzz_A 133 VISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDI 212 (391)
T ss_dssp EEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC
T ss_pred EEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCc
Confidence 777654 689999999984459999999999999999 5789999999999999999999875322
Q ss_pred cchhccC---Cc--EEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhC-CCchHHHHHHHHHh----hHHHHHH
Q 012321 341 QKALSLG---AD--LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-GALNPNAAYLIIRG----MKTLHLR 409 (466)
Q Consensus 341 ~~pl~~g---aD--ivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G-~~ls~~~A~l~lrg----L~tl~~R 409 (466)
.....++ .| +++.|+||+++.+| .+.|+++++ +++++.++......+ ...++...+.+... .+.++.+
T Consensus 213 ~~~~~~~~~~~d~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 291 (391)
T 3dzz_A 213 TPAFTVDWDAKNWVVSLISPSKTFNLAA-LHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLREL 291 (391)
T ss_dssp CCGGGSCTTTGGGEEEEECSHHHHTCTT-TCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHH
T ss_pred eehhhcCccccCcEEEEEeChhhccccc-hhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHH
Confidence 1122222 45 99999999997666 357888886 889998887655333 23333333333222 3336677
Q ss_pred HHHHHHHHHHHHHHHHc-CCCcEE
Q 012321 410 VQQQNSTALRMAKILEA-HPKVKR 432 (466)
Q Consensus 410 ~e~~~~na~~La~~L~~-~p~V~~ 432 (466)
.++..++++.+.+.|++ .|.+..
T Consensus 292 ~~~~~~~~~~l~~~l~~~~~~~~~ 315 (391)
T 3dzz_A 292 KQVLRDNFAYAREFLAKEVPEVKV 315 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHHHHHHHhhCCCcEE
Confidence 77888899999999998 777643
No 32
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.92 E-value=8.4e-23 Score=205.57 Aligned_cols=220 Identities=12% Similarity=0.148 Sum_probs=171.3
Q ss_pred cCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
+.+|+++...++++++++++|. ++.+++++|++|+.+++.+++++||+|+++.+.|.+.... +...|.++..++
T Consensus 61 ~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~ 136 (363)
T 3ffh_A 61 TEIYPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQN----ALIEGAEVREIP 136 (363)
T ss_dssp CCBC----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHH----HHHHTCEEEEEE
T ss_pred hhcCCCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHH----HHHcCCEEEEec
Confidence 4455677789999999999985 5677788888999999999999999999999999885543 344577777776
Q ss_pred CC-----CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCc-------cchhccC
Q 012321 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-------QKALSLG 347 (466)
Q Consensus 282 ~~-----D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~--gillIvD~t~a~~~~-------~~pl~~g 347 (466)
.. |+++++++++++ +++|++++|+||||.+.|+++|.++++.+ |+++|+|++|+.... ......+
T Consensus 137 ~~~~~~~d~~~l~~~i~~~-~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 215 (363)
T 3ffh_A 137 LLQDGEHDLEGMLNAIDEK-TTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYK 215 (363)
T ss_dssp CCTTSCCCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCT
T ss_pred CCCCCCcCHHHHHHhcccC-CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCC
Confidence 54 899999999874 99999999999999999999999999887 999999999873221 1111234
Q ss_pred CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L 424 (466)
.++++.|+||.++.+| .+.|+++++++++++++.....+ ..++..++.+...+ +.+..+.++..++++.+.+.|
T Consensus 216 ~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l 292 (363)
T 3ffh_A 216 NLIITRTFSKIYGLAS-ARVGYGIADKEIIRQLNIVRPPF--NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFA 292 (363)
T ss_dssp TEEEEEESSSTTCCSS-CCCEEEEECHHHHHHHHHTCCSC--CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeechhhhcCch-hceeeeecCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688999999998776 45788889999999888765533 44555555444444 566777788889999999999
Q ss_pred HcCCCcE
Q 012321 425 EAHPKVK 431 (466)
Q Consensus 425 ~~~p~V~ 431 (466)
++++++.
T Consensus 293 ~~~~g~~ 299 (363)
T 3ffh_A 293 KRFEKVK 299 (363)
T ss_dssp HHCTTCE
T ss_pred hhCCCce
Confidence 9977664
No 33
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.91 E-value=7.3e-24 Score=216.68 Aligned_cols=200 Identities=22% Similarity=0.194 Sum_probs=165.1
Q ss_pred hHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHH
Q 012321 211 TTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~ 287 (466)
..+.+++.+++++|. ++++++++|++|+..++.++ +||+|+++.+.|+++...+. .++..|+++..+ .|+++
T Consensus 59 ~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v--~d~~~ 133 (374)
T 2aeu_A 59 FAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIER-SCKIVNAKYFES--DKVGE 133 (374)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEE--SCHHH
T ss_pred HHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEe--CCHHH
Confidence 345777778888898 77888999999999999877 99999999999988766554 455678888877 68999
Q ss_pred HHHhccCCCceE-EEEeCCCCCCc-ccccHHHHHHHHHhcCCEEEEeCCCCCCC---c-cc-hhccCCcEEEeccccccc
Q 012321 288 LEAALNNNNVSL-FFTESPTNPFL-RCVDVKLVSDLCHKKGAIVCIDGTFATPL---N-QK-ALSLGADLVLHSATKFIG 360 (466)
Q Consensus 288 Le~ai~~~~tkl-V~lesPsNPtG-~v~dl~~I~ela~~~gillIvD~t~a~~~---~-~~-pl~~gaDivv~S~sK~lg 360 (466)
|+++ ++ ++++ |++++|+||+| ...|+++|.++|+++|+++|+|++|+... . .. +...+.|+++.|+||+++
T Consensus 134 l~~~-~~-~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~ 211 (374)
T 2aeu_A 134 ILNK-ID-KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLME 211 (374)
T ss_dssp HHTT-CC-TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSS
T ss_pred HHhc-CC-CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCccccc
Confidence 9988 65 5999 99999999999 88899999999999999999999987543 1 11 556788999999999988
Q ss_pred cccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHH-HHHHHHHHHHHH
Q 012321 361 GHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL-RVQQQNSTALRM 420 (466)
Q Consensus 361 G~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~~-R~e~~~~na~~L 420 (466)
|. ++|+++++++++++++.....++...++..++.+...++.+.. +++++.++++.+
T Consensus 212 g~---~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 269 (374)
T 2aeu_A 212 GP---RGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNF 269 (374)
T ss_dssp SC---SCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
T ss_pred Cc---ceEEEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 75 4799999999999998887777777788888877777777644 667777777666
No 34
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.91 E-value=1.1e-22 Score=205.21 Aligned_cols=215 Identities=15% Similarity=0.097 Sum_probs=164.9
Q ss_pred chhHHHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 209 NPTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e--~-~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
.+..+++++++++++|.+ + .+++++|++|+..++.+++++||+|+++++.|.+.. +...+...|+++..++.
T Consensus 52 ~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 129 (386)
T 2dr1_A 52 RKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKR--YKEVVESNGRKAVVLEYEPG 129 (386)
T ss_dssp HHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHH--HHHHHHHhCCceEEEecCCC
Confidence 678899999999999975 5 455677779999999999999999999999998731 22334556777777754
Q ss_pred --CCHHHHHHhccC-CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEeccccc
Q 012321 283 --ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKF 358 (466)
Q Consensus 283 --~D~e~Le~ai~~-~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK~ 358 (466)
.|+++|++++++ .++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. ......++|+++.|+||+
T Consensus 130 ~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~ 209 (386)
T 2dr1_A 130 KAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKA 209 (386)
T ss_dssp CCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTST
T ss_pred CCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEecccc
Confidence 689999999942 2489999999999999999999999999999999999999886543 233345789999999999
Q ss_pred cccccCceEEEEEeChHHHHHHH----------------HHH--HHhCCCchHHHHHHHHHhhHH------HHHHHHHHH
Q 012321 359 IGGHNDVLAGSISGSGKLVTQIR----------------NLH--HVLGGALNPNAAYLIIRGMKT------LHLRVQQQN 414 (466)
Q Consensus 359 lgG~gdv~gG~vvg~~eli~~l~----------------~~~--~~~G~~ls~~~A~l~lrgL~t------l~~R~e~~~ 414 (466)
++++.+ .|+++++++++++++ ... .....+.++...+.+...++. ++.+.++..
T Consensus 210 ~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~ 287 (386)
T 2dr1_A 210 FGVPPG--LAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYE 287 (386)
T ss_dssp TCCCSS--CEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCCc--eEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 998743 599999999888763 121 122234444444433333432 456677888
Q ss_pred HHHHHHHHHHHcC
Q 012321 415 STALRMAKILEAH 427 (466)
Q Consensus 415 ~na~~La~~L~~~ 427 (466)
++++.+.+.|+++
T Consensus 288 ~~~~~l~~~L~~~ 300 (386)
T 2dr1_A 288 KRAKMVREGVREI 300 (386)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 8999999999876
No 35
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.91 E-value=1.9e-23 Score=210.62 Aligned_cols=220 Identities=15% Similarity=0.240 Sum_probs=169.4
Q ss_pred cCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
+.+|+++...+|++++++++|. ++.+++++|++|+.+++.+++++||+|+++.+.|.+.... +...|.++..+
T Consensus 61 ~~~y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v 136 (367)
T 3euc_A 61 LNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMS----AQFAGLEFVGV 136 (367)
T ss_dssp TTCSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHH----HHTTTCEEEEE
T ss_pred hhcCCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHH----HHHcCCeEEEe
Confidence 3445556789999999999997 4555556666999999999999999999999999986543 34567777776
Q ss_pred C-----CCCHHHHHHhccCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhc--CCEEEEeCCCCCCCcc----chhcc
Q 012321 281 D-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKK--GAIVCIDGTFATPLNQ----KALSL 346 (466)
Q Consensus 281 d-----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~---dl~~I~ela~~~--gillIvD~t~a~~~~~----~pl~~ 346 (466)
+ ..|+++|++++++.++++|++++|+||||.+. ++++|+++|+++ |+++|+|++|+..... .....
T Consensus 137 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 216 (367)
T 3euc_A 137 PLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDF 216 (367)
T ss_dssp ECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTC
T ss_pred cCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhC
Confidence 5 34899999999873499999999999999997 477888889999 9999999998753221 11223
Q ss_pred CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHH
Q 012321 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 347 gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg---L~tl~~R~e~~~~na~~La~~ 423 (466)
+.++++.|+||+ +++| .+.|+++++++++++++.....++ .++..++.+... .+.+..+.++..++++.+.+.
T Consensus 217 ~~~i~~~s~sK~-~~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 292 (367)
T 3euc_A 217 GNLLVMRTVSKL-GLAG-IRLGYVAGDPQWLEQLDKVRPPYN--VNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEG 292 (367)
T ss_dssp TTEEEEEECCCT-TSCS-CCEEEEEECHHHHHHHGGGCCSSC--CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecchhh-cccc-cCceeeeeCHHHHHHHHHhCCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 566999999999 6655 568999999999988876554333 445444444333 344677788888999999999
Q ss_pred HHcCCCcE
Q 012321 424 LEAHPKVK 431 (466)
Q Consensus 424 L~~~p~V~ 431 (466)
|+++|++.
T Consensus 293 l~~~~g~~ 300 (367)
T 3euc_A 293 MAAHGGVT 300 (367)
T ss_dssp HHTSTTCE
T ss_pred HHhCCCcE
Confidence 99998876
No 36
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.91 E-value=4.7e-23 Score=207.58 Aligned_cols=216 Identities=12% Similarity=0.182 Sum_probs=169.8
Q ss_pred cCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
+.+|+++...+|++++++++|. ++.+++++|++|+.+++.+++++||+|+++.+.|...... +...|.++..++
T Consensus 59 ~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~ 134 (365)
T 3get_A 59 AHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIY----AKQCGAKCYKTQ 134 (365)
T ss_dssp TTSCCCTTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHH----HHHHTCEEEECS
T ss_pred hccCCCCChHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHH----HHHcCCEEEEEe
Confidence 3444555557999999999995 5777888888999999999999999999999999986543 344688888887
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHH--hcCCEEEEeCCCCCCC---c----cchh---
Q 012321 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH--KKGAIVCIDGTFATPL---N----QKAL--- 344 (466)
Q Consensus 282 ~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~--~~gillIvD~t~a~~~---~----~~pl--- 344 (466)
. .|+++|++++++ ++++|++++|+||||.+.++++|.++++ ++|+++|+|++|+... . ....
T Consensus 135 ~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 213 (365)
T 3get_A 135 SITHNLDEFKKLYETHKD-EIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELI 213 (365)
T ss_dssp SSSCCHHHHHHHHHHTTT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHH
T ss_pred cCCCCCCCHHHHHHHhCC-CCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHh
Confidence 5 578999999986 4999999999999999999999888888 6799999999987322 1 1111
Q ss_pred -ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHH---HhhHHHHHHHHHHHHHHHHH
Q 012321 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII---RGMKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 345 -~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~l---rgL~tl~~R~e~~~~na~~L 420 (466)
..+.++++.|+||+++.+| .+.|+++++++++++++.....++ .++..++.+. +..+.+..+.+++.++++.+
T Consensus 214 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 290 (365)
T 3get_A 214 KEFDNVLYLGTFSKLYGLGG-LRIGYGIANANIISAFYKLRAPFN--VSNLALKAAVAAMDDDEFTEKTLENNFSQMELY 290 (365)
T ss_dssp HHCTTEEEEEESSSTTSCTT-TCCEEEEECHHHHHHHHHHSCTTC--SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeecchHhcCcc-hheEEEEcCHHHHHHHHHhcCCCC--cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 2367799999999998676 357888899999999887766554 4444444333 33355777788888999999
Q ss_pred HHHHHcC
Q 012321 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 291 ~~~l~~~ 297 (365)
T 3get_A 291 KEFAKKH 297 (365)
T ss_dssp HHHHHHT
T ss_pred HHHHHhC
Confidence 9999987
No 37
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.91 E-value=2.9e-23 Score=211.53 Aligned_cols=222 Identities=15% Similarity=0.171 Sum_probs=174.8
Q ss_pred CCCCchhHHHHHHHHHhhhCC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 205 GRYGNPTTVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~-----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
.+...+..+++++++++++|. ++.+++++|++|+..++.+++++||+|+++.+.|.+....+ ...|.++..
T Consensus 77 ~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~ 152 (407)
T 3nra_A 77 YRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLV----EFFEGEMVP 152 (407)
T ss_dssp TTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHHH----HHTTCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHHH----HHcCCEEEE
Confidence 334467788999999999886 56777777779999999999999999999999999865433 345666665
Q ss_pred eCC-----------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----c
Q 012321 280 IDP-----------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----Q 341 (466)
Q Consensus 280 vd~-----------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~----~ 341 (466)
++. .|+++|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.... .
T Consensus 153 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~ 231 (407)
T 3nra_A 153 VQLDYVSADETRAGLDLTGLEEAFKA-GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASY 231 (407)
T ss_dssp EEBCCCSSCCSSCCBCHHHHHHHHHT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCC
T ss_pred eecccccccCcCCCcCHHHHHHHHhh-CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 543 389999999987 4899999999999999998 89999999999999999999875321 1
Q ss_pred ch---h---ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHH
Q 012321 342 KA---L---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQ 411 (466)
Q Consensus 342 ~p---l---~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e 411 (466)
.+ + ..+.++++.|+||.++.+| .+.|++++++++++.++.....+....++..++.+...+ +.+..+.+
T Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 310 (407)
T 3nra_A 232 THLRAEAAVDAENVVTIMGPSKTESLSG-YRLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIA 310 (407)
T ss_dssp CCGGGCTTSCGGGEEEEECSSSTTCCGG-GCCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHH
T ss_pred CChhhcCcccCCcEEEEeCcccccCCCe-eeEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHH
Confidence 11 1 1345699999999998665 457899999999999988877776666666555444433 34677788
Q ss_pred HHHHHHHHHHHHHHcCCCcEE
Q 012321 412 QQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~~ 432 (466)
+..++++.+.+.|+++|.+..
T Consensus 311 ~~~~~~~~l~~~L~~~~~~~~ 331 (407)
T 3nra_A 311 RHQAIRDELLHVLRGCEGVFA 331 (407)
T ss_dssp HHHHHHHHHHHHHHTSTTCBC
T ss_pred HHHHHHHHHHHHHhcCCCcee
Confidence 888999999999999876643
No 38
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.91 E-value=1.7e-22 Score=206.00 Aligned_cols=216 Identities=15% Similarity=0.144 Sum_probs=171.0
Q ss_pred cCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~ 283 (466)
+.....+..+++++++++++|.++.+++++|++|+..++.+++++||+|+++.+.|+.+... +...|.++..++..
T Consensus 82 ~~~g~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~----~~~~g~~~~~v~~~ 157 (398)
T 3a2b_A 82 FLNGTLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDG----SRLSFSKVIKYGHN 157 (398)
T ss_dssp TTTCCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHH----HHHSSSEEEEECTT
T ss_pred cccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHH----HHHcCCceEEeCCC
Confidence 33334688999999999999999899999999999999999999999999999999986644 34468888888888
Q ss_pred CHHHHHHhccCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc----chhc-c----CCcEE
Q 012321 284 DMEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS-L----GADLV 351 (466)
Q Consensus 284 D~e~Le~ai~~~---~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~----~pl~-~----gaDiv 351 (466)
|+++|++++++. ++++|++++|+||||.+.++++|.++|+++|+++|+|++|+.+... .... . ++|++
T Consensus 158 d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~ 237 (398)
T 3a2b_A 158 NMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLI 237 (398)
T ss_dssp CHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEE
T ss_pred CHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEE
Confidence 999999999762 4899999999999999999999999999999999999999765321 1112 1 26999
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHH-HH-HhCCCchHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHHc
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-HH-VLGGALNPNAAYL---IIRGMKTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~-~~-~~G~~ls~~~A~l---~lrgL~tl~~R~e~~~~na~~La~~L~~ 426 (466)
+.|+||+++.+| |++++++++++.++.. .. ......++..... +++.++.+..+.++..++++.+.+.|++
T Consensus 238 ~~s~sK~~~~~G----G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 313 (398)
T 3a2b_A 238 MGTFSKSLASLG----GFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLD 313 (398)
T ss_dssp EEESSSTTCSSC----EEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHH
T ss_pred EecccccccCCC----cEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999654 8999999999988774 22 2233344443322 2333333445677788889999999987
Q ss_pred C
Q 012321 427 H 427 (466)
Q Consensus 427 ~ 427 (466)
.
T Consensus 314 ~ 314 (398)
T 3a2b_A 314 H 314 (398)
T ss_dssp T
T ss_pred c
Confidence 6
No 39
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.91 E-value=1.7e-22 Score=204.57 Aligned_cols=225 Identities=15% Similarity=0.137 Sum_probs=173.1
Q ss_pred CCccCCCCchhHHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g----~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~ 276 (466)
.+.|+.+..+..+++++++++++| .++.+++++|++|+.+++.+++++||+|+++.+.|.+....+ ...|.+
T Consensus 62 ~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g~~ 137 (391)
T 4dq6_A 62 IYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVV----KNNNRE 137 (391)
T ss_dssp CCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHH----HHTTCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHH----HHcCCe
Confidence 467887778889999999999988 356778888889999999999999999999999999866443 346777
Q ss_pred EEEeCCC---------CHHHHHHhccCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCcc---
Q 012321 277 ATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (466)
Q Consensus 277 v~~vd~~---------D~e~Le~ai~~~~tklV~lesPsNPtG~v~---dl~~I~ela~~~gillIvD~t~a~~~~~--- 341 (466)
+..++.. |+++|++++++ +++|++++|+||||.+. ++++|.++|+++|+++|+|++|+.....
T Consensus 138 ~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~ 215 (391)
T 4dq6_A 138 LIISPLQKLENGNYIMDYEDIENKIKD--VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHK 215 (391)
T ss_dssp EEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCC
T ss_pred EEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCC
Confidence 7776543 89999999976 89999999999999994 6889999999999999999998753221
Q ss_pred --chhcc-----CCcEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHHHhCC-CchHHHHHHHHHhh----HHHHH
Q 012321 342 --KALSL-----GADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGG-ALNPNAAYLIIRGM----KTLHL 408 (466)
Q Consensus 342 --~pl~~-----gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~~~G~-~ls~~~A~l~lrgL----~tl~~ 408 (466)
..... +..+++.|+||.++.+| .+.|++++++ ++++.++......+. +.++..+..+...+ +.+..
T Consensus 216 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 294 (391)
T 4dq6_A 216 HIPMASISKEFEKNTITCMAPTKTFNIAG-LQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLES 294 (391)
T ss_dssp CCCGGGSCHHHHHTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHH
T ss_pred ccCHHHcCccccCcEEEEEechhhccCcc-cceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHH
Confidence 11122 23489999999998666 4578888775 888888877654432 44555444333333 33666
Q ss_pred HHHHHHHHHHHHHHHHHc-CCCcEE
Q 012321 409 RVQQQNSTALRMAKILEA-HPKVKR 432 (466)
Q Consensus 409 R~e~~~~na~~La~~L~~-~p~V~~ 432 (466)
+.++..++++.+.+.|++ .|.+..
T Consensus 295 ~~~~~~~~~~~l~~~l~~~~~~~~~ 319 (391)
T 4dq6_A 295 FLEYLESNIDFAIKYINENMPKLKV 319 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCEe
Confidence 677888899999999988 577643
No 40
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.91 E-value=8.8e-23 Score=204.43 Aligned_cols=217 Identities=15% Similarity=0.196 Sum_probs=170.4
Q ss_pred cCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
+.+|+++...+|++++++++|. ++.+++++|++|+..++.+++++||+|+++.++|.+.... +...|+++..++
T Consensus 45 ~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~ 120 (354)
T 3ly1_A 45 ANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHF----AKIAGMKVTKVK 120 (354)
T ss_dssp TTSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEEC
T ss_pred CcCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHHH----HHHcCCEEEEec
Confidence 3455678889999999999985 5667777777999999999999999999999999986543 345688888887
Q ss_pred CC-----CHHHHHHhccC-CCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcc----chh----c
Q 012321 282 PA-----DMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----S 345 (466)
Q Consensus 282 ~~-----D~e~Le~ai~~-~~tklV~lesPsNPtG~v~dl~~I~ela~~--~gillIvD~t~a~~~~~----~pl----~ 345 (466)
.. |+++|++++++ .++++|++++|+||||.+.++++|.++++. +|+++|+|++|+..... ... .
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 200 (354)
T 3ly1_A 121 MLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQ 200 (354)
T ss_dssp CCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHT
T ss_pred CCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhh
Confidence 55 89999999983 259999999999999999999888888887 99999999998753321 111 2
Q ss_pred c-CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHH
Q 012321 346 L-GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 346 ~-gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La 421 (466)
. +.++++.|+||+++.+| .+.|+++++++++++++.....+ ..++...+.+...+ +.+..+.+++.++++.+.
T Consensus 201 ~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 277 (354)
T 3ly1_A 201 GAENIILLKTFSKIHAMAG-MRVGYAVAHPTVIALMGRYVAGE--KINFSGVDAALASMNDSAFITYSKKSNDVSRQILL 277 (354)
T ss_dssp TCSSEEEEEESSSTTCCGG-GCCEEEECCHHHHHHHGGGTTCS--CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeeChhhccChh-hhheeeecCHHHHHHHHHhcCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 2 56799999999997665 45799999999999887765543 44555444444333 456677788888999999
Q ss_pred HHHHcC
Q 012321 422 KILEAH 427 (466)
Q Consensus 422 ~~L~~~ 427 (466)
+.|+++
T Consensus 278 ~~l~~~ 283 (354)
T 3ly1_A 278 KALEDL 283 (354)
T ss_dssp HHHHHH
T ss_pred HHHHHC
Confidence 999875
No 41
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.91 E-value=3e-23 Score=210.52 Aligned_cols=221 Identities=16% Similarity=0.175 Sum_probs=168.6
Q ss_pred CchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 208 GNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~al----l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
..+...++++++++++|. ++.+++++|++|+.+++.++ +++||+|+++.++|++....+.......|+++..+
T Consensus 65 ~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~ 144 (406)
T 1kmj_A 65 ATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVI 144 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEE
Confidence 456788999999999997 45677777789999999999 89999999999999987655545555568888777
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEec
Q 012321 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (466)
Q Consensus 281 d~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S 354 (466)
+. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. ......+.|+++.|
T Consensus 145 ~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s 223 (406)
T 1kmj_A 145 PLNPDGTLQLETLPTLFDEK-TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFS 223 (406)
T ss_dssp CBCTTSCBCGGGHHHHCCTT-EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEE
T ss_pred ecCCCCCcCHHHHHHHhccC-CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEE
Confidence 64 3789999999874 99999999999999999999999999999999999999876533 22234579999999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHHHH---------------------HhCCCchHHHHHHHH-HhhHH-----HH
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLII-RGMKT-----LH 407 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~---------------------~~G~~ls~~~A~l~l-rgL~t-----l~ 407 (466)
++|.++++| .|+++++++++++++.... .+....++..++.++ ..++. ++
T Consensus 224 ~~K~~g~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 300 (406)
T 1kmj_A 224 GHKLYGPTG---IGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLN 300 (406)
T ss_dssp GGGTTSCTT---CEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHH
T ss_pred chhccCCCC---cEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHH
Confidence 999997665 5899999998887754321 011111222222222 22332 33
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcEE
Q 012321 408 LRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 408 ~R~e~~~~na~~La~~L~~~p~V~~ 432 (466)
...++..++++.+.+.|++.|++..
T Consensus 301 ~~~~~~~~~~~~l~~~L~~~~~~~~ 325 (406)
T 1kmj_A 301 NIAEYEQNLMHYALSQLESVPDLTL 325 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 4566677889999999999877643
No 42
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.91 E-value=4.1e-22 Score=201.29 Aligned_cols=208 Identities=15% Similarity=0.271 Sum_probs=165.5
Q ss_pred HHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC
Q 012321 212 TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 212 ~~~Lee~lA~l~g--------~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~ 283 (466)
...|++.++++++ .++.+++++|++|+.+++.+++++||+|++++++|++.... +...|.++..++ .
T Consensus 68 ~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~-~ 142 (370)
T 2z61_A 68 ILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNF----IRFLGAKPVFCD-F 142 (370)
T ss_dssp CHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHH----HHHTTCEEEEEC-S
T ss_pred CHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEeC-C
Confidence 4567777776653 25677888888999999999999999999999999986543 345688888887 7
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc----cchhc----cCCcEEEecc
Q 012321 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----QKALS----LGADLVLHSA 355 (466)
Q Consensus 284 D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~----~~pl~----~gaDivv~S~ 355 (466)
|+++|++++++ ++++|++++|+||||.+.+++ |.++|+++|+++|+|++|..+.. ..... .+.|+++.|+
T Consensus 143 d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~ 220 (370)
T 2z61_A 143 TVESLEEALSD-KTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGF 220 (370)
T ss_dssp SHHHHHHHCCS-SEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEES
T ss_pred CHHHHHHhccc-CceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecC
Confidence 89999999987 499999999999999999999 99999999999999999876432 11222 3678999999
Q ss_pred ccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH-----HHHHHHHHHHHHHHHHHHHHHcC
Q 012321 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 356 sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~-----tl~~R~e~~~~na~~La~~L~~~ 427 (466)
||+++.+| .+.|++++++++++.++........+.++...+.+...++ .++...++..++++.+.+.|+++
T Consensus 221 sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 296 (370)
T 2z61_A 221 SKLYAMTG-WRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF 296 (370)
T ss_dssp TTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhccCCcc-ceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99998666 4679999999999999887766655666666655554444 34455666778888999999876
No 43
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.90 E-value=1.7e-22 Score=209.33 Aligned_cols=212 Identities=16% Similarity=0.178 Sum_probs=172.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~ 287 (466)
..+...+|+++|++++|.++.++++||++|+..++.+++++||+|+++.+.|++....+ ...|.++..++..|+++
T Consensus 107 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 182 (427)
T 2w8t_A 107 TFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGC----QQGNAEIVRFRHNSVED 182 (427)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHH----HHSCSEEEEECTTCHHH
T ss_pred CcHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHH----HHcCCeeEEeCCCCHHH
Confidence 45788999999999999999999999999999999999999999999999999865443 34578888888889999
Q ss_pred HHHhccCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---------chhccCCcEEEecc
Q 012321 288 LEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLHSA 355 (466)
Q Consensus 288 Le~ai~~~---~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~---------~pl~~gaDivv~S~ 355 (466)
|++++++. ++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+... ..+..++|+++.|+
T Consensus 183 le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~ 262 (427)
T 2w8t_A 183 LDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTF 262 (427)
T ss_dssp HHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEES
T ss_pred HHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecc
Confidence 99999762 4899999999999999999999999999999999999998865432 11123579999999
Q ss_pred ccccccccCceEEEEEeChHHHHHHHHHH--HHhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012321 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 356 sK~lgG~gdv~gG~vvg~~eli~~l~~~~--~~~G~~ls~~~A~l~lrgL~tl---~~R~e~~~~na~~La~~L~~~ 427 (466)
+|+++.+ ||++++++++++.++... ..++...++..+..+...++.+ +.+.++..++++++.+.|++.
T Consensus 263 sK~~g~~----gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 335 (427)
T 2w8t_A 263 SKSVGTV----GGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM 335 (427)
T ss_dssp SSTTCSC----CEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhccC----CCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999854 499999998888776542 2334556666555554555544 667788888999999999876
No 44
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.90 E-value=1e-22 Score=209.01 Aligned_cols=211 Identities=11% Similarity=0.117 Sum_probs=169.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~L 288 (466)
.+..++|++++++++|.+..+++++|++|+..++.+++++||+|+++++.|+.+...+ ...|.++..++..|+++|
T Consensus 103 ~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~d~~~l 178 (409)
T 3kki_A 103 DYDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGA----RYANAQAHPFMHNNCDHL 178 (409)
T ss_dssp TTTSCHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHH----HHTTCEEEEECTTCHHHH
T ss_pred cHHHHHHHHHHHHHhCCCeEEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHH----HHcCCeEEEecCCCHHHH
Confidence 3567789999999999999999999999999999999999999999999999866443 345788888888899999
Q ss_pred HHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-------c--hhccCCcEEEecccccc
Q 012321 289 EAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------K--ALSLGADLVLHSATKFI 359 (466)
Q Consensus 289 e~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~-------~--pl~~gaDivv~S~sK~l 359 (466)
+++++++++++|++++|+||||.+.++++|.++|+++|++||+|++|+.+... . ....+.|+++.|++|++
T Consensus 179 e~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~ 258 (409)
T 3kki_A 179 RMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTF 258 (409)
T ss_dssp HHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTT
T ss_pred HHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhh
Confidence 99997644899999999999999999999999999999999999998764321 1 11225789999999999
Q ss_pred ccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012321 360 GGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 360 gG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~tl---~~R~e~~~~na~~La~~L~~~ 427 (466)
+++ +|++++++++++.++.... .++...++..+..++..++.+ ..+.++..++++.+.+.|++.
T Consensus 259 ~~~----gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 327 (409)
T 3kki_A 259 AYR----AGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQL 327 (409)
T ss_dssp CSS----CEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCC----ceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 976 4999999988887765332 344445665544444444433 456667788899999999876
No 45
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.90 E-value=3.4e-22 Score=203.73 Aligned_cols=210 Identities=13% Similarity=0.161 Sum_probs=156.3
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
...|++.+++++ |. ++.+++++|++|+.+++.+++++||+|+++.|+|......+ +..|.++..++.
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~ 145 (385)
T 1b5p_A 70 IPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMV----RFAGGVVVEVETL 145 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHH----HHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEeecC
Confidence 345555555544 42 45666666679999999999999999999999998755433 345777666643
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chhcc--C
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSL--G 347 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl~~--g 347 (466)
.|+++|+++++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|+..... ....+ +
T Consensus 146 ~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 224 (385)
T 1b5p_A 146 PEEGFVPDPERVRRAITPR-TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPE 224 (385)
T ss_dssp GGGTTCCCHHHHHTTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTT
T ss_pred cccCCCCCHHHHHHhcCCC-CEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCC
Confidence 4789999999874 999999999999999976 889999999999999999998764321 11222 5
Q ss_pred CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHh-------hHHHHHHHHHHHHHHHHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG-------MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrg-------L~tl~~R~e~~~~na~~L 420 (466)
.++++.|+||.++.+| .+.|+++++++++++++..+.....+.+....+.+... .+.++...+++.++++.+
T Consensus 225 ~~i~~~s~SK~~~~~G-~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 303 (385)
T 1b5p_A 225 HTLTVNGAAKAFAMTG-WRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLL 303 (385)
T ss_dssp TEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEechhhcCCcc-cceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHH
Confidence 6799999999999777 45799999999999888776544434444444433222 334555667777888888
Q ss_pred HHHHHcC
Q 012321 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 304 ~~~L~~~ 310 (385)
T 1b5p_A 304 LEGLTAL 310 (385)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
Confidence 8888865
No 46
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.90 E-value=1.7e-22 Score=204.27 Aligned_cols=218 Identities=17% Similarity=0.245 Sum_probs=163.9
Q ss_pred CCCCchhHHHHHHHHHhhhCCC-cEEEeCCH-HHHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~e-~~v~~~SG-~aAi~~al~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
.+|+++...+|++++++++|.+ +.+++++| ++++..++.+++++| |+|+++.|+|.+....+ ...|.++..++
T Consensus 53 ~~Y~~~~~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~v~ 128 (356)
T 1fg7_A 53 NRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSA----ETIGVECRTVP 128 (356)
T ss_dssp TSCCCSSCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHH----HHHTCEEEECC
T ss_pred ccCCCccHHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHH----HHcCCEEEEee
Confidence 4455556789999999999863 44555555 599999999999999 99999999999866443 34577777765
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHH---HHHHHhcCCEEEEeCCCCCCCc-cchh----ccCC
Q 012321 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV---SDLCHKKGAIVCIDGTFATPLN-QKAL----SLGA 348 (466)
Q Consensus 282 ~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I---~ela~~~gillIvD~t~a~~~~-~~pl----~~ga 348 (466)
. .|+++++++++ ++++|++++|+||||.+.+.++| +++|+ +|+++|+|++|..... .... ..+.
T Consensus 129 ~~~~~~~d~~~l~~~i~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~ 205 (356)
T 1fg7_A 129 TLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPH 205 (356)
T ss_dssp CCTTSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTT
T ss_pred CCCCCCCCHHHHHHHhc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCC
Confidence 3 47899999987 49999999999999999986555 55555 8999999999875431 1111 2356
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH-----HHHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t-----l~~R~e~~~~na~~La~~ 423 (466)
++++.|+||+++.+| .+.|++++++++++.++.....+ +.++..++.+...++. +..+.++..++++.+.+.
T Consensus 206 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 282 (356)
T 1fg7_A 206 LAILRTLSKAFALAG-LRCGFTLANEEVINLLMKVIAPY--PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAA 282 (356)
T ss_dssp EEEEEESSSTTCCGG-GCCEEEEECHHHHHHHHHHSCSS--CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecchHhhcCch-hhhEEEEeCHHHHHHHHHhcCCC--CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999998766 45789999999999888765544 3455555544444433 566677788889999999
Q ss_pred HHcCCCcEE
Q 012321 424 LEAHPKVKR 432 (466)
Q Consensus 424 L~~~p~V~~ 432 (466)
|++++.+..
T Consensus 283 L~~~~~~~~ 291 (356)
T 1fg7_A 283 LKEIPCVEQ 291 (356)
T ss_dssp HHHSTTEEE
T ss_pred HHhCCCceE
Confidence 999886533
No 47
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.90 E-value=4.5e-23 Score=206.82 Aligned_cols=224 Identities=15% Similarity=0.149 Sum_probs=165.3
Q ss_pred CCccCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCccchHHHHHhhcccCC
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all----~pGD~VLv~~~~y~~t~~~~~~~l~~~g 274 (466)
.|.|++...+..+++++++++++|.+ +.+++++|++|+.+++.+++ ++||+|+++++.|++....+. .+...|
T Consensus 34 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~-~~~~~g 112 (382)
T 4hvk_A 34 VHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQG 112 (382)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHHHTT
T ss_pred cchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHH-HHHhcC
Confidence 35555666788899999999999974 45666677799999999887 999999999999998766543 334568
Q ss_pred cEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCC
Q 012321 275 ITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGA 348 (466)
Q Consensus 275 i~v~~vd~~-----D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~ga 348 (466)
+++.+++.. |+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+ +|+|++++.+.. ......++
T Consensus 113 ~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~ 190 (382)
T 4hvk_A 113 FEVEYIPVGKYGEVDVSFIDQKLRDD-TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGA 190 (382)
T ss_dssp CEEEEECBCTTSCBCHHHHHHHCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTC
T ss_pred CEEEEeccCCCCCcCHHHHHHHhccC-ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCC
Confidence 888888643 899999999874 9999999999999999999999999999999 999999876544 23334589
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHH-------HHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTA 417 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-------~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na 417 (466)
|+++.|+||+++++| .|+++.+++. .++... .....+.+....+.+...+ +.++.+.++..+++
T Consensus 191 d~~~~s~~K~~g~~g---~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 265 (382)
T 4hvk_A 191 DMLTISSNDIYGPKG---VGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLR 265 (382)
T ss_dssp SEEEEESGGGTSCTT---CEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeHHHhcCCCc---eEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999887665 3555554432 111111 0112223333332222222 34556677788889
Q ss_pred HHHHHHHHcCCCcEE
Q 012321 418 LRMAKILEAHPKVKR 432 (466)
Q Consensus 418 ~~La~~L~~~p~V~~ 432 (466)
+.+.+.|+++|.+..
T Consensus 266 ~~l~~~L~~~~~~~~ 280 (382)
T 4hvk_A 266 DRIIDNVLKIEESYL 280 (382)
T ss_dssp HHHHHHHTTSTTEEE
T ss_pred HHHHHHHhcCCCeEE
Confidence 999999998887643
No 48
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.90 E-value=4.1e-22 Score=202.30 Aligned_cols=214 Identities=14% Similarity=0.181 Sum_probs=161.9
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
...+++.+++++ |. ++.+++++|++|+..++.+++++||+|+++++.|++.... ++..|+++..++.
T Consensus 69 ~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~~~ 144 (388)
T 1j32_A 69 EPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEM----VKLAEGTPVILPTT 144 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHH----HHHTTCEEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCEEEEecCC
Confidence 445555555554 42 4556666667999999999999999999999999986543 3446777777653
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----chh----
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL---- 344 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~pl---- 344 (466)
.|+++|+++++++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++|+..... ...
T Consensus 145 ~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 223 (388)
T 1j32_A 145 VETQFKVSPEQIRQAITPK-TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASP 223 (388)
T ss_dssp GGGTTCCCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCH
T ss_pred cccCCCCCHHHHHHhcCcC-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccc
Confidence 3789999999874 999999999999999964 899999999999999999998754321 111
Q ss_pred -ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHH
Q 012321 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALR 419 (466)
Q Consensus 345 -~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~~ 419 (466)
..+.|+++.|+||+++.+| .+.|+++++++++++++..........++..++.+...+ +.+..+.+++.++++.
T Consensus 224 ~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (388)
T 1j32_A 224 EAYERSVVCSGFAKTYAMTG-WRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRY 302 (388)
T ss_dssp HHHHTEEEEEESTTTTTCTT-TCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHH
T ss_pred cccCCEEEEeechhccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 1457899999999998666 457999999999998887766544455555544433333 3466667788889999
Q ss_pred HHHHHHcCCCcE
Q 012321 420 MAKILEAHPKVK 431 (466)
Q Consensus 420 La~~L~~~p~V~ 431 (466)
+.+.|++.|++.
T Consensus 303 l~~~L~~~~g~~ 314 (388)
T 1j32_A 303 MLDALNAMPGLE 314 (388)
T ss_dssp HHHHHHTCTTCB
T ss_pred HHHHHhhCCCCc
Confidence 999999887664
No 49
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.90 E-value=4.7e-22 Score=200.71 Aligned_cols=226 Identities=17% Similarity=0.112 Sum_probs=173.7
Q ss_pred CCccCCCCchhHHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g----~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~ 276 (466)
.+.|+....+..+++++.+++.+| .++.+++++|++|+.+++.+++++||+|+++.+.|.+.... +...|.+
T Consensus 54 ~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~ 129 (383)
T 3kax_A 54 IFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEM----VTTNNRQ 129 (383)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHH----HHHTTCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHH----HHHcCCE
Confidence 456776677889999999999987 25677778888999999999999999999999999986643 3446777
Q ss_pred EEEeCC--------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----
Q 012321 277 ATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (466)
Q Consensus 277 v~~vd~--------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~---- 341 (466)
+..++. .|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|......
T Consensus 130 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~ 208 (383)
T 3kax_A 130 LCVSPLQKQNDTYAIDFEHLEKQFQQ-GVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTH 208 (383)
T ss_dssp EEECCCEEETTEEECCHHHHHHHHTT-TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred EEeccceecCCcEEEcHHHHHHHhCc-CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCc
Confidence 777653 589999999965 4999999999999999986 566777799999999999998753221
Q ss_pred -chhc-----cCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCC-CchHHHHHHHHHhhH----HHHHH
Q 012321 342 -KALS-----LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG-ALNPNAAYLIIRGMK----TLHLR 409 (466)
Q Consensus 342 -~pl~-----~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~-~ls~~~A~l~lrgL~----tl~~R 409 (466)
.... .+.++++.|+||.++.+| .+.|++++ ++++++.++......+. +.++..++.+...++ .+..+
T Consensus 209 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 287 (383)
T 3kax_A 209 TPFASLSEELAARTITCMAPSKTFNIAG-LQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEI 287 (383)
T ss_dssp CCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHH
T ss_pred eeHhhcCccccCcEEEEEEChhhccCcc-hhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHH
Confidence 1111 245699999999998666 45788887 68899988877665543 456655554444433 36666
Q ss_pred HHHHHHHHHHHHHHHHc-CCCcEE
Q 012321 410 VQQQNSTALRMAKILEA-HPKVKR 432 (466)
Q Consensus 410 ~e~~~~na~~La~~L~~-~p~V~~ 432 (466)
.++..++++.+.+.|++ .|.+..
T Consensus 288 ~~~~~~~~~~l~~~l~~~~~~~~~ 311 (383)
T 3kax_A 288 RFYIEDNAKFACEYIKDHIPTLSV 311 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHHHHHHHhhCCCceE
Confidence 77788899999999988 677643
No 50
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.90 E-value=2.4e-22 Score=203.02 Aligned_cols=219 Identities=13% Similarity=0.100 Sum_probs=167.5
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
+...++++++++++|.+ +.+++++|++|+.+++.++ +++||+|+++.+.|++....+....+..|.++..++.
T Consensus 59 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 138 (390)
T 1elu_A 59 QLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATL 138 (390)
T ss_dssp HHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCC
Confidence 67889999999999974 6778888899999999999 8999999999999998765444444556788877764
Q ss_pred ---CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHH----hcCCEEEEeCCCCCCCcc-chhccCCcEEEec
Q 012321 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH----KKGAIVCIDGTFATPLNQ-KALSLGADLVLHS 354 (466)
Q Consensus 283 ---~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~----~~gillIvD~t~a~~~~~-~pl~~gaDivv~S 354 (466)
.|+++|+++++++ +++|++++|+||||.+.|+++|.++|+ ++|+++|+|++|+.+... .....+.|+++.|
T Consensus 139 ~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s 217 (390)
T 1elu_A 139 NQGDAAAVLANHLGPK-TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFT 217 (390)
T ss_dssp SSSCHHHHHHTTCCTT-EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEE
T ss_pred CccchHHHHHHhcCCC-ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEcc
Confidence 3689999999874 999999999999999999999999999 999999999998754321 1124578999999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHHH----------------------HHhCCCchHHHHH---HHHHhhHH---H
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH----------------------HVLGGALNPNAAY---LIIRGMKT---L 406 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~~----------------------~~~G~~ls~~~A~---l~lrgL~t---l 406 (466)
++|++.++.. .|+++++++++++++... ....++.+..... .+++.++. +
T Consensus 218 ~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~ 295 (390)
T 1elu_A 218 GHKWFAGPAG--VGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTA 295 (390)
T ss_dssp SSSTTCCCTT--CEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCH
T ss_pred ccccccCCCc--eEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 9996655532 589999988877664321 1111233333222 23333333 5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcE
Q 012321 407 HLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 407 ~~R~e~~~~na~~La~~L~~~p~V~ 431 (466)
..+.++..++++.+.+.|+++|++.
T Consensus 296 ~~~~~~~~~~~~~l~~~L~~~~g~~ 320 (390)
T 1elu_A 296 EERYQAICQRSEFLWRGLNQLPHVH 320 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 6677888899999999999987764
No 51
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.90 E-value=1.9e-22 Score=205.99 Aligned_cols=210 Identities=15% Similarity=0.211 Sum_probs=159.0
Q ss_pred HHHHHHHHHhhhC--------C-CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSALEG--------A-ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l~g--------~-e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...+++.++++++ . ++.+++++|++|+..++.+++++||+|+++.|.|.+....+ ...|.++..++.
T Consensus 63 ~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~ 138 (410)
T 3e2y_A 63 HPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMV----RMAGAVPVFIPL 138 (410)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEC
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEEec
Confidence 4556666666544 2 45666666669999999999999999999999999866443 335666555542
Q ss_pred ----------------CCHHHHHHhccCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCcc--
Q 012321 283 ----------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (466)
Q Consensus 283 ----------------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~---dl~~I~ela~~~gillIvD~t~a~~~~~-- 341 (466)
.|+++++++++++ +++|++++|+||||.++ ++++|+++|+++|+++|+|++|......
T Consensus 139 ~~~~~~g~~~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 217 (410)
T 3e2y_A 139 RSKPTDGMKWTSSDWTFDPRELESKFSSK-TKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH 217 (410)
T ss_dssp EECCCCSSCCBGGGEECCHHHHHTTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC
T ss_pred cccccccccccccCCcCCHHHHHhhcCCC-ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC
Confidence 3899999999874 99999999999999995 6899999999999999999998753211
Q ss_pred ---chhc----cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----------
Q 012321 342 ---KALS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---------- 404 (466)
Q Consensus 342 ---~pl~----~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~---------- 404 (466)
.... .+.++++.|+||.++.+| .+.|++++++++++.++..........++..++.+...++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 296 (410)
T 3e2y_A 218 THVKIATLPGMWERTITIGSAGKTFSVTG-WKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296 (410)
T ss_dssp CCCCGGGSTTCGGGEEEEEEHHHHSSCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTT
T ss_pred CCCCHHHcCCccCeEEEEecchhhcCCCC-ceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchH
Confidence 1111 234599999999998666 4679999999999998877765555556655554444443
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHcC
Q 012321 405 -TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 -tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+..+.+++.++++.+.+.|+++
T Consensus 297 ~~~~~~~~~~~~~~~~l~~~L~~~ 320 (410)
T 3e2y_A 297 CYFNSLPKELEVKRDRMVRLLNSV 320 (410)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 35666777888999999999987
No 52
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.90 E-value=1.2e-22 Score=205.84 Aligned_cols=211 Identities=20% Similarity=0.274 Sum_probs=175.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC---
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~--- 283 (466)
.++...++|+.+++++|.+++++++||++|+..++.++ +++||+|+++.++|.++...+ ...|+++.+++..
T Consensus 33 ~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~----~~~G~~~~~~~~~~~~ 108 (367)
T 3nyt_A 33 LGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETV----ALLGAKPVYVDIDPRT 108 (367)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHH----HHcCCEEEEEecCCcc
Confidence 56889999999999999999999999999999999999 899999999999999876543 4468888877632
Q ss_pred ---CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCC--cEEEecc--c
Q 012321 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA--DLVLHSA--T 356 (466)
Q Consensus 284 ---D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~ga--Divv~S~--s 356 (466)
|+++|+++++++ +++|+ |+||+|.+.|+++|.++|+++|+++|+|++++.+........+. |+++.|+ +
T Consensus 109 ~~~d~~~l~~~i~~~-~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~ 184 (367)
T 3nyt_A 109 YNLDPQLLEAAITPR-TKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPS 184 (367)
T ss_dssp CSBCGGGTGGGCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTT
T ss_pred CCcCHHHHHHhcCcC-CcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCC
Confidence 789999999874 89888 78999999999999999999999999999988655433333333 9999996 8
Q ss_pred cccccccCceEEEEEe-ChHHHHHHHHHHHH------------hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 012321 357 KFIGGHNDVLAGSISG-SGKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 357 K~lgG~gdv~gG~vvg-~~eli~~l~~~~~~------------~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~ 423 (466)
|++++.|. +|++++ ++++.++++..+.. ++..+++..+.+++..++.++.+.++..++++++.+.
T Consensus 185 K~l~~~g~--gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~ 262 (367)
T 3nyt_A 185 APLGCYGD--GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLS 262 (367)
T ss_dssp SSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCcCc--eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998663 788887 57788887765432 2345778888888888888888888899999999999
Q ss_pred HHcCC
Q 012321 424 LEAHP 428 (466)
Q Consensus 424 L~~~p 428 (466)
|++.+
T Consensus 263 L~~~~ 267 (367)
T 3nyt_A 263 LKQVG 267 (367)
T ss_dssp HHHTT
T ss_pred hccCC
Confidence 99874
No 53
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.90 E-value=7.3e-23 Score=209.93 Aligned_cols=211 Identities=16% Similarity=0.168 Sum_probs=174.1
Q ss_pred chhHHHHHHHH-HhhhC-CCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 209 NPTTVVVEEKM-SALEG-AESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 209 ~p~~~~Lee~l-A~l~g-~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
.|...+||+++ ++++| .+++++++||++|+.+++.++ +++||+||++.+.|.++...+ ...|+++.+++.
T Consensus 35 ~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~----~~~G~~~~~v~~~~~ 110 (377)
T 3ju7_A 35 GPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAA----IWCGLEPYFIDISID 110 (377)
T ss_dssp CHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTT
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCc
Confidence 48899999999 99999 789999999999999999998 899999999999999876443 456888888763
Q ss_pred ---CCHHHHHHhccCCC--ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhcc---CCcEEEec
Q 012321 283 ---ADMEGLEAALNNNN--VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSL---GADLVLHS 354 (466)
Q Consensus 283 ---~D~e~Le~ai~~~~--tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~---gaDivv~S 354 (466)
.|+++|++++...+ |++|+ |+||+|.+.|+++|.++|+ +|++||+|++++.+........ ..|+.++|
T Consensus 111 ~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S 186 (377)
T 3ju7_A 111 DWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYS 186 (377)
T ss_dssp TCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEE
T ss_pred cCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEE
Confidence 28999999883224 88887 7889999999999999999 9999999999886644332233 26888888
Q ss_pred c--ccccccccCceEEEEEe-ChHHHHHHHHHHHH------------hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 012321 355 A--TKFIGGHNDVLAGSISG-SGKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALR 419 (466)
Q Consensus 355 ~--sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~------------~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~ 419 (466)
+ +|++++ + .||+++. +++++++++.++.. ++..++++.+++.+..+++++.+++++++++++
T Consensus 187 ~~~~K~l~~-g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~~ 263 (377)
T 3ju7_A 187 FHATKPFGI-G--EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISEW 263 (377)
T ss_dssp CBTTSSSCC-B--SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCCCcCCC-C--CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 699997 4 3677776 56788888776542 235578899999999999999999999999999
Q ss_pred HHHHHHcCCCc
Q 012321 420 MAKILEAHPKV 430 (466)
Q Consensus 420 La~~L~~~p~V 430 (466)
+.+.|++++.+
T Consensus 264 ~~~~L~~~~~~ 274 (377)
T 3ju7_A 264 YKQLLQSNGLM 274 (377)
T ss_dssp HHHHHHHTTTT
T ss_pred HHHHhcCCCCc
Confidence 99999998754
No 54
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.90 E-value=1.5e-22 Score=205.84 Aligned_cols=217 Identities=16% Similarity=0.204 Sum_probs=172.4
Q ss_pred cCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
|+++..+...+|++++++++|.++.++++||++|+.+++.++ +++||+|+++.+.|.++...+ ...|+++.+++.
T Consensus 32 ~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~~~v~~ 107 (388)
T 1b9h_A 32 WWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAA----QRLGAVTVPVDV 107 (388)
T ss_dssp CBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECB
T ss_pred eeecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHHHHHHH----HHcCCEEEEEec
Confidence 445567889999999999999989999999999999999999 899999999999999876443 456788777753
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---chhccCCcEEEe
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KALSLGADLVLH 353 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~---~pl~~gaDivv~ 353 (466)
.|+++|+++++++ +++|+ |+||+|.+.|+++|.++|+++|+++|+|++++.+... ....++ |+++.
T Consensus 108 ~~~~~~~d~~~l~~~i~~~-~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~-~i~~~ 182 (388)
T 1b9h_A 108 DAATYNLDPEAVAAAVTPR-TKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELD-SIATF 182 (388)
T ss_dssp CTTTCCBCHHHHHHHCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSS-SCEEE
T ss_pred CCCcCCCCHHHHHHhcCcC-ceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeeccccc-ceEEE
Confidence 3899999999874 88887 9999999999999999999999999999999875432 222333 67777
Q ss_pred ccc--cccccccCceEEEEEeChH-H--HHHHHHHHHH-------------hCC--CchHHHHHHHHHhhHHHHHHHHHH
Q 012321 354 SAT--KFIGGHNDVLAGSISGSGK-L--VTQIRNLHHV-------------LGG--ALNPNAAYLIIRGMKTLHLRVQQQ 413 (466)
Q Consensus 354 S~s--K~lgG~gdv~gG~vvg~~e-l--i~~l~~~~~~-------------~G~--~ls~~~A~l~lrgL~tl~~R~e~~ 413 (466)
|++ |+++|+ ++|+++++++ + +++++..... .|. .+++..+++++..++.+..+++++
T Consensus 183 S~s~~K~l~g~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~ 259 (388)
T 1b9h_A 183 SFQNGKLMTAG---EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVR 259 (388)
T ss_dssp ECCTTSSSCSS---SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHH
T ss_pred EccCCCcccCC---CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 776 777663 4799998875 5 5655443211 022 256677777777888888888999
Q ss_pred HHHHHHHHHHHHcCCCcEE
Q 012321 414 NSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 414 ~~na~~La~~L~~~p~V~~ 432 (466)
.++++.+.+.|+++|++..
T Consensus 260 ~~~~~~l~~~L~~~~~~~~ 278 (388)
T 1b9h_A 260 DERWTLLSRLLGAIDGVVP 278 (388)
T ss_dssp HHHHHHHHHHHHTSTTCEE
T ss_pred HHHHHHHHHHhccCCCccc
Confidence 9999999999999887643
No 55
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.90 E-value=1.6e-21 Score=198.76 Aligned_cols=215 Identities=13% Similarity=0.107 Sum_probs=161.4
Q ss_pred HHHHHHHHHhh----hC----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 212 TVVVEEKMSAL----EG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~lA~l----~g----~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
...+++.++++ +| .++.+++++|++|+.+++.+++++||+|++..|+|.+....+ ...|.++..++.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~ 143 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAI----KNQERKIIECELL 143 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHH----HTTTCEEEECCCE
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHH----HHcCCEEEecccc
Confidence 45566666665 46 256777777789999999999999999999999999866443 345777766643
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----cchhc--
Q 012321 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALS-- 345 (466)
Q Consensus 283 -------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~-----~~pl~-- 345 (466)
.|+++|++++++.++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... .....
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (399)
T 1c7n_A 144 EKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSID 223 (399)
T ss_dssp EETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSC
T ss_pred cCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcC
Confidence 57999999997435999999999999999998 89999999999999999999875322 11111
Q ss_pred ---cCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCC-CchHHHHHHHHHhh----HHHHHHHHHHHHH
Q 012321 346 ---LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG-ALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (466)
Q Consensus 346 ---~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~-~ls~~~A~l~lrgL----~tl~~R~e~~~~n 416 (466)
.+.++++.|+||+++.+| .+.|+++++ ++++++++.....++. +.++..++.+...+ +.++.+.++..++
T Consensus 224 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 302 (399)
T 1c7n_A 224 EQLADKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKN 302 (399)
T ss_dssp HHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ccccCcEEEEEeChhhccccc-hheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 356799999999998666 356888886 6799988877666542 34555444443333 3455666777888
Q ss_pred HHHHHHHHHc-CCCcE
Q 012321 417 ALRMAKILEA-HPKVK 431 (466)
Q Consensus 417 a~~La~~L~~-~p~V~ 431 (466)
++.+.+.|++ +|.+.
T Consensus 303 ~~~l~~~L~~~~~~~~ 318 (399)
T 1c7n_A 303 QRIVKDFFEVNHPEIK 318 (399)
T ss_dssp HHHHHHHHHHHCTTSB
T ss_pred HHHHHHHHHhhCCCCe
Confidence 9999999988 66653
No 56
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.90 E-value=7e-22 Score=200.36 Aligned_cols=211 Identities=16% Similarity=0.145 Sum_probs=164.8
Q ss_pred hHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------
Q 012321 211 TTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~------ 282 (466)
...+|++.++++.+. ++.+++++|++|+.+++.+++++||+|+++++.|++.... ++..|+++..++.
T Consensus 62 ~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~~ 137 (381)
T 1v2d_A 62 GLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPD----AFLAGAKARLVRLDLTPEG 137 (381)
T ss_dssp CCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEECEEETTE
T ss_pred CCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHcCCEEEEEeCCCCCcc
Confidence 467999999999986 4677778888999999999999999999999999986543 3445777666543
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----cchh--ccCCcEE
Q 012321 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL--SLGADLV 351 (466)
Q Consensus 283 --~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~----~~pl--~~gaDiv 351 (466)
.|+++|+++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... .... ..+.|++
T Consensus 138 ~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~ 216 (381)
T 1v2d_A 138 FRLDLSALEKALTPR-TRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFT 216 (381)
T ss_dssp EECCHHHHHTTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEE
T ss_pred CCcCHHHHHHhcCcC-CEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEE
Confidence 3799999999764 999999999999999986 88999999999999999999875432 1122 3478999
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH------HHHHHHHHHHHHHHHHHHHHH
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~------tl~~R~e~~~~na~~La~~L~ 425 (466)
+.|+||+++.+| .+.|++++++++++.++........+.++...+.+...++ .++...+++.++++.+.+.|+
T Consensus 217 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 295 (381)
T 1v2d_A 217 VGSAGKRLEATG-YRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLR 295 (381)
T ss_dssp EEEHHHHTTCGG-GCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeechhhcCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998666 4579999999999988876654444445544433333333 345566777888999999998
Q ss_pred cC
Q 012321 426 AH 427 (466)
Q Consensus 426 ~~ 427 (466)
+.
T Consensus 296 ~~ 297 (381)
T 1v2d_A 296 AM 297 (381)
T ss_dssp HT
T ss_pred HC
Confidence 74
No 57
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.90 E-value=9.7e-22 Score=199.65 Aligned_cols=210 Identities=14% Similarity=0.109 Sum_probs=158.6
Q ss_pred HHHHHHHHHhh----hCC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSAL----EGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l----~g~----e-~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...|++.++++ +|. + +.+++++|++|+..++.+++++||+|+++++.|++.... ++..|.++..++.
T Consensus 69 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~~ 144 (386)
T 1u08_A 69 VQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPA----IALSGGIVKRMAL 144 (386)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHH----HHHcCCEEEEeec
Confidence 34555555555 463 4 677778888999999999999999999999999986543 3445777666542
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-------cchh--
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------QKAL-- 344 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~-------~~pl-- 344 (466)
.|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... ...+
T Consensus 145 ~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 223 (386)
T 1u08_A 145 QPPHFRVDWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQ 223 (386)
T ss_dssp CTTTCCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHH
T ss_pred CcccCcCCHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccC
Confidence 589999999976 4999999999999999985 68999999999999999999875321 1111
Q ss_pred ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHH
Q 012321 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRM 420 (466)
Q Consensus 345 ~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~----tl~~R~e~~~~na~~L 420 (466)
..+.|+++.|+||+++++| .+.|+++++++++++++..........++..+..+...++ .+....++..++++.+
T Consensus 224 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 302 (386)
T 1u08_A 224 LRERAVAVSSFGKTYHMTG-WKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDIL 302 (386)
T ss_dssp HHTTEEEEEEHHHHTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHH
T ss_pred ccCcEEEEecchhhcCCcc-cceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 3478999999999998766 4579999999999988876654444444444433333333 3555667777888899
Q ss_pred HHHHHcC
Q 012321 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 303 ~~~L~~~ 309 (386)
T 1u08_A 303 VNALNES 309 (386)
T ss_dssp HHHTTSS
T ss_pred HHHHHHC
Confidence 9999876
No 58
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.90 E-value=1e-22 Score=206.96 Aligned_cols=224 Identities=15% Similarity=0.137 Sum_probs=163.8
Q ss_pred CCccCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc----cCCC-EEEEcCCCccchHHHHHhhcccC
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGG-HIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all----~pGD-~VLv~~~~y~~t~~~~~~~l~~~ 273 (466)
.|.|+++..+..+++++++++++|.+ +.+++++|++|+.+++.+++ ++|| +|+++++.|+++...+.. +...
T Consensus 54 ~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~-~~~~ 132 (400)
T 3vax_A 54 RHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEH-LAGR 132 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHH-HHTT
T ss_pred cchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHH-HHhc
Confidence 35566666788899999999999974 67777788899999999987 8999 999999999987665543 3557
Q ss_pred CcEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc-hhccC
Q 012321 274 GITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-ALSLG 347 (466)
Q Consensus 274 gi~v~~vd~~-----D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~-pl~~g 347 (466)
|+++..++.. |+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.... ....
T Consensus 133 g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~- 210 (400)
T 3vax_A 133 GFEVDFLTPGPSGRISVEGVMERLRPD-TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP- 210 (400)
T ss_dssp TCEEEEECCCTTCCCCHHHHHTTCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-
T ss_pred CCeEEEEccCCCCCcCHHHHHHhcCCC-ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-
Confidence 8888888743 899999999874 9999999999999999999999999999999999999998654322 2233
Q ss_pred CcEEEeccccccccccCceEEEEE-eCh-HHH---HHHHHHH-------HHhCCCchHHHHHHHHHhhHH----HHHHHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSIS-GSG-KLV---TQIRNLH-------HVLGGALNPNAAYLIIRGMKT----LHLRVQ 411 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vv-g~~-eli---~~l~~~~-------~~~G~~ls~~~A~l~lrgL~t----l~~R~e 411 (466)
.|+++.|++|.+++.+ .|+++ .++ ++. ..++... .....+.+....+.+...++. ++...+
T Consensus 211 ~d~~~~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~ 287 (400)
T 3vax_A 211 IDMISISGHKIGAPKG---VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQV 287 (400)
T ss_dssp CSEEEEETGGGTSCSS---CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CcEEEEeHHHhCCCCc---eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHH
Confidence 8999999999766544 35555 544 111 1111111 111223344333333333332 455667
Q ss_pred HHHHHHHHHHHHHHcCCCcE
Q 012321 412 QQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~ 431 (466)
+..++++++.+.|+ .+++.
T Consensus 288 ~~~~~~~~l~~~L~-~~~~~ 306 (400)
T 3vax_A 288 AAQDLRSRLLAGLA-STSFQ 306 (400)
T ss_dssp HHHHHHHHHHHHHT-TTTCE
T ss_pred HHHHHHHHHHHhhC-CCCEE
Confidence 77788888999998 77664
No 59
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.90 E-value=8.4e-22 Score=201.05 Aligned_cols=211 Identities=15% Similarity=0.173 Sum_probs=161.8
Q ss_pred hHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~----g~----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
....|++.+++++ |. ++.+++++|++|+..++.+++++||+|++++++|.+....+ ...|.++..++.
T Consensus 79 g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~ 154 (389)
T 1o4s_A 79 GIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQI----ILAGGTVNVVET 154 (389)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHcCCEEEEEec
Confidence 3566777777665 53 45666677779999999999999999999999999866443 345777666642
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chhc---
Q 012321 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS--- 345 (466)
Q Consensus 283 -------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl~--- 345 (466)
.|+++|+++++++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.+... ....
T Consensus 155 ~~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~ 233 (389)
T 1o4s_A 155 FMSKNFQPSLEEVEGLLVGK-TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSE 233 (389)
T ss_dssp CGGGTTCCCHHHHHHTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCS
T ss_pred CCccCCCCCHHHHHHhcccC-ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCC
Confidence 3799999999874 999999999999999987 899999999999999999998764321 1122
Q ss_pred -cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHH
Q 012321 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-LHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 346 -~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t-l~~R~e~~~~na~~La~~ 423 (466)
.+.|+++.|+||+++.+| .+.|++++++++++.++..........++..++.+...++. +....++..++++.+.+.
T Consensus 234 ~~~~~i~~~s~sK~~~~~G-~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~ 312 (389)
T 1o4s_A 234 GFDRIVYINGFSKSHSMTG-WRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVER 312 (389)
T ss_dssp SSTTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 367999999999998666 45799999999999888776655445566655555444432 445566777888889998
Q ss_pred HHcC
Q 012321 424 LEAH 427 (466)
Q Consensus 424 L~~~ 427 (466)
|+++
T Consensus 313 L~~~ 316 (389)
T 1o4s_A 313 LKKM 316 (389)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 8875
No 60
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.89 E-value=8.7e-22 Score=202.11 Aligned_cols=215 Identities=16% Similarity=0.226 Sum_probs=160.9
Q ss_pred hhHHHHHHHHHhhhCC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--
Q 012321 210 PTTVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~-----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-- 282 (466)
+.++.+.+.+.+.+|. ++.+++++|++|+..++.+++++||+|++..|.|.+....+ ...|.++..++.
T Consensus 71 ~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~ 146 (422)
T 3fvs_A 71 PLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMT----MMAGGRPVFVSLKP 146 (422)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEECBC
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHH----HHcCCEEEEEeccc
Confidence 3445555555554443 35666666679999999999999999999999999866443 345666655532
Q ss_pred ---------------CCHHHHHHhccCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCcc---
Q 012321 283 ---------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (466)
Q Consensus 283 ---------------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~---dl~~I~ela~~~gillIvD~t~a~~~~~--- 341 (466)
.|+++|+++++++ +++|++++|+||||.+. ++++|.++|+++|+++|+|++|+.....
T Consensus 147 ~~~~~G~~~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 225 (422)
T 3fvs_A 147 GPIQNGELGSSSNWQLDPMELAGKFTSR-TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQ 225 (422)
T ss_dssp CCCCSSSCCBGGGSBCCHHHHHTTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC
T ss_pred ccccccccccccCCCCCHHHHHhhcCCC-ceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCC
Confidence 4899999999874 99999999999999999 6899999999999999999998753211
Q ss_pred --chhc----cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH-----------
Q 012321 342 --KALS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----------- 404 (466)
Q Consensus 342 --~pl~----~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~----------- 404 (466)
.... .+.++++.|+||.++.+| .+.|++++++++++.+...........++..++.+...++
T Consensus 226 ~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 304 (422)
T 3fvs_A 226 HISIASLPGMWERTLTIGSAGKTFSATG-WKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSS 304 (422)
T ss_dssp CCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTC
T ss_pred CCChhhcccccCcEEEEecchhccCCcc-ceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHH
Confidence 1111 245699999999998666 4579999999999998877665555555655554444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcE
Q 012321 405 TLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 405 tl~~R~e~~~~na~~La~~L~~~p~V~ 431 (466)
.+..+.+++.++++.+.+.|+++ ++.
T Consensus 305 ~~~~~~~~~~~~~~~l~~~L~~~-g~~ 330 (422)
T 3fvs_A 305 YFVQFPQAMQRCRDHMIRSLQSV-GLK 330 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-TCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 35666778888999999999987 443
No 61
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.89 E-value=9.8e-22 Score=199.58 Aligned_cols=210 Identities=12% Similarity=0.159 Sum_probs=160.0
Q ss_pred HHHHHHHHHhhh----CC----Cc-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSALE----GA----ES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~----e~-~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...|++.+++++ |. ++ .+++++|++|+..++.+++++||+|++++++|++....+ ...|+++..++.
T Consensus 65 ~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~v~~ 140 (389)
T 1gd9_A 65 LLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAV----ILAGGKPVEVPT 140 (389)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHH----HHHTCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHCCCEEEEecc
Confidence 456666666655 62 56 777778889999999999999999999999999866443 345666666542
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCcc-----chhc--
Q 012321 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS-- 345 (466)
Q Consensus 283 -------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~---dl~~I~ela~~~gillIvD~t~a~~~~~-----~pl~-- 345 (466)
.|+++|++++++ ++++|++++|+||||.+. ++++|.++|+++|+++|+|++|..+... ....
T Consensus 141 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 219 (389)
T 1gd9_A 141 YEEDEFRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLD 219 (389)
T ss_dssp CGGGTTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGST
T ss_pred CCccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhcc
Confidence 379999999987 499999999999999998 5899999999999999999998765321 1122
Q ss_pred --cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH------HHHHHHHHHHHHH
Q 012321 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTA 417 (466)
Q Consensus 346 --~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~------tl~~R~e~~~~na 417 (466)
.+.|+++.|+||+++.+| .+.|+++++++++++++........+.++...+.+...++ .+..+.+++.+++
T Consensus 220 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (389)
T 1gd9_A 220 GMFERTITVNGFSKTFAMTG-WRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRR 298 (389)
T ss_dssp TCGGGEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecChhhcCCcc-cceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Confidence 356899999999998666 4579999999999998876655444555554444433333 3455566778888
Q ss_pred HHHHHHHHcC
Q 012321 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+.+.+.|+++
T Consensus 299 ~~l~~~L~~~ 308 (389)
T 1gd9_A 299 KLVWKRLNEM 308 (389)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 9999999886
No 62
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.89 E-value=4.5e-22 Score=201.45 Aligned_cols=212 Identities=16% Similarity=0.160 Sum_probs=163.0
Q ss_pred hhHHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 210 PTTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~lA~l~----g~----e-~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
+....|++.+++++ |. + +.+++++|++|+.+++.+++++||+|+++.|.|++....+ ...|.++..+
T Consensus 63 ~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~~ 138 (376)
T 2dou_A 63 SCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAA----RVASLRTFLI 138 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH----HHTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHH----HHcCCEEEEe
Confidence 45778888888877 75 3 5666666679999999999999999999999999865443 3457777776
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----cchhc---
Q 012321 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS--- 345 (466)
Q Consensus 281 d~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~----~~pl~--- 345 (466)
+. .|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... ...+.
T Consensus 139 ~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 217 (376)
T 2dou_A 139 PLREDGLADLKAVPEGVWR-EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPG 217 (376)
T ss_dssp CBCTTSSBCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTT
T ss_pred eCCCCCCCCHHHHHHhhcc-CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCC
Confidence 53 477888888865 4899999999999999986 67899999999999999999875321 11222
Q ss_pred -cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHH
Q 012321 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRM 420 (466)
Q Consensus 346 -~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~----tl~~R~e~~~~na~~L 420 (466)
.+.++++.|+||+++.+| .+.|+++++++++++++......+.+.++..++.+...++ .+..+.+++.++++.+
T Consensus 218 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 296 (376)
T 2dou_A 218 AKERVVELFSLSKSYNLAG-FRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGM 296 (376)
T ss_dssp GGGTEEEEEEHHHHHTCGG-GCCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecchhhcCChh-heeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 256799999999998666 4578999999999999887766655555655544444443 3555666778889999
Q ss_pred HHHHHcC
Q 012321 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 297 ~~~L~~~ 303 (376)
T 2dou_A 297 AEALKGV 303 (376)
T ss_dssp HHHHTTT
T ss_pred HHHHHHh
Confidence 9999876
No 63
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.89 E-value=2.5e-22 Score=202.60 Aligned_cols=214 Identities=16% Similarity=0.208 Sum_probs=173.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC---
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~--- 283 (466)
.++...+|+++++++++.++++++++|++|+..++.++ +++||+|+++.++|+++... +...|+++.+++..
T Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~ 111 (374)
T 3uwc_A 36 LGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIASVGA----IVQAGATPVLVDSENGY 111 (374)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHH----HHHTTCEEEEECBCTTS
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHH----HHHcCCEEEEEecCCCC
Confidence 57889999999999999999999999999999999999 99999999999999986643 34568888888754
Q ss_pred --CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccC--CcEEEeccc--c
Q 012321 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT--K 357 (466)
Q Consensus 284 --D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~g--aDivv~S~s--K 357 (466)
|+++++++++++ +++|+ |+||+|.+.|+++|.++|+++|+++|+|++|+.+........+ .|+++.|+| |
T Consensus 112 ~~d~~~l~~~~~~~-~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K 187 (374)
T 3uwc_A 112 VIDPEKIEAAITDK-TKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLK 187 (374)
T ss_dssp SBCGGGTGGGCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSS
T ss_pred CcCHHHHHHhCCCC-ceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCC
Confidence 899999999874 88888 8999999999999999999999999999999876443322233 799999977 9
Q ss_pred ccccccCceEEEEEeC-hHHHHHHHHHHHH------------hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 012321 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~-~eli~~l~~~~~~------------~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L 424 (466)
++++++. +|+++++ +++.++++..... ....+.++.+.+.+..++.++.+.++..++++.+.+.|
T Consensus 188 ~l~~~g~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l 265 (374)
T 3uwc_A 188 NLNVWSD--AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSF 265 (374)
T ss_dssp SSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHT
T ss_pred cCCccce--eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9988663 7888765 4677777665421 11224667777767677777888888889999999999
Q ss_pred HcCCC-cE
Q 012321 425 EAHPK-VK 431 (466)
Q Consensus 425 ~~~p~-V~ 431 (466)
++.+. +.
T Consensus 266 ~~~~~~~~ 273 (374)
T 3uwc_A 266 VDLSEFID 273 (374)
T ss_dssp GGGTTTEE
T ss_pred ccCCCeEE
Confidence 98876 54
No 64
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.89 E-value=3.1e-22 Score=201.70 Aligned_cols=217 Identities=12% Similarity=0.133 Sum_probs=164.2
Q ss_pred cCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
+.+|+++...+|++++++++|. ++.+++++|++|+.+++.+++++||+|+++.++|.+.... +...|.++..++
T Consensus 59 ~~~y~~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~v~ 134 (360)
T 3hdo_A 59 LRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTL----AEVQGARVRTFG 134 (360)
T ss_dssp GGSCCCSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHH----HHHHTCEEEEEC
T ss_pred hhcCCCCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHH----HHHCCCEEEEee
Confidence 4455566678999999999984 6788888888999999999999999999999999986643 344578888776
Q ss_pred CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccch----hccCCcEEEecccc
Q 012321 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----LSLGADLVLHSATK 357 (466)
Q Consensus 282 ~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~p----l~~gaDivv~S~sK 357 (466)
..+...+++..+..++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+....... ...+.++++.|+||
T Consensus 135 ~~~~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK 214 (360)
T 3hdo_A 135 LTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSK 214 (360)
T ss_dssp BCTTSSBTTCCSSBCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTT
T ss_pred CCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchH
Confidence 53321222222222367999999999999999999999999999999999999875221111 12356699999999
Q ss_pred ccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~---lrgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.++.+| .+.|++++++++++.++.....+ ..++..++.+ ++..+.+..+.++..++++.+.+.|+++
T Consensus 215 ~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 284 (360)
T 3hdo_A 215 SYSLAG-MRIGLAIARPEVIAALDKIRDHY--NLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI 284 (360)
T ss_dssp TTSCTT-SCCEEEECCHHHHHHHHHHSCSC--CSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcCCc-cceeeEeeCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 998666 45789999999999888766443 3445444443 3334456677788888999999999987
No 65
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.89 E-value=6.3e-22 Score=204.27 Aligned_cols=228 Identities=19% Similarity=0.156 Sum_probs=172.0
Q ss_pred CCccCCCCchhHHHHHHHHHhhhCC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEGA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g~----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~ 276 (466)
.+.|+....+..+++.+++++.+|. ++.+++++|++|+..++.+++++||+|++..+.|.+....+ ...|.+
T Consensus 91 ~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~----~~~g~~ 166 (421)
T 3l8a_A 91 IFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTI----RLNDHR 166 (421)
T ss_dssp CSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHH----HHTTEE
T ss_pred CcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHH----HHCCCE
Confidence 4678777778888999999988872 45667777779999999999999999999999999866444 334666
Q ss_pred EEEeCC--------CCHHHHHHhccCCCceEEEEeCCCCCCccc---ccHHHHHHHHHhcCCEEEEeCCCCCCCc-----
Q 012321 277 ATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----- 340 (466)
Q Consensus 277 v~~vd~--------~D~e~Le~ai~~~~tklV~lesPsNPtG~v---~dl~~I~ela~~~gillIvD~t~a~~~~----- 340 (466)
+..++. .|+++|++++++.++++|++++|+||+|.+ .++++|.++|+++|++||+|++|.....
T Consensus 167 ~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~ 246 (421)
T 3l8a_A 167 LVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTH 246 (421)
T ss_dssp EEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred EEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 555542 489999999983359999999999999998 4689999999999999999999865321
Q ss_pred cchhc-----cCCcEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhCC-CchHHHHHHHHH----hhHHHHHH
Q 012321 341 QKALS-----LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG-ALNPNAAYLIIR----GMKTLHLR 409 (466)
Q Consensus 341 ~~pl~-----~gaDivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~-~ls~~~A~l~lr----gL~tl~~R 409 (466)
..... .+.++++.|++|+++.+| ...|+++++ +++++.++......+. +.+++.+..+.. ..+.++.+
T Consensus 247 ~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~ 325 (421)
T 3l8a_A 247 HSLNTLDASYKDFTIILSSATKTFNIAG-TKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEEL 325 (421)
T ss_dssp CCGGGSCTTGGGTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccHHHcCchhcCcEEEEEeChhhccCch-hheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHH
Confidence 11111 245699999999998666 457888887 8898888876644432 445544333322 33446677
Q ss_pred HHHHHHHHHHHHHHHHcCCCcEEE
Q 012321 410 VQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 410 ~e~~~~na~~La~~L~~~p~V~~V 433 (466)
.++..++++.+.+.|+++|.+..+
T Consensus 326 ~~~~~~~~~~l~~~L~~~~~i~~~ 349 (421)
T 3l8a_A 326 KTVIEGNIKLVIKELEAKTKIKVM 349 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCceEe
Confidence 778888999999999887776544
No 66
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.89 E-value=1.9e-22 Score=203.21 Aligned_cols=221 Identities=15% Similarity=0.135 Sum_probs=160.2
Q ss_pred CCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCccchHHHHHhhcccCCcEEE
Q 012321 205 GRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all----~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~ 278 (466)
++...+..+++++++++++|.+ +.+++++|++|+.+++.++. ++||+|+++++.|++....+. .+...|+++.
T Consensus 38 ~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~ 116 (382)
T 4eb5_A 38 GFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVE 116 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHTTTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHH-HHHhCCcEEE
Confidence 3334567899999999999975 56666778899999999987 899999999999998765553 3445688888
Q ss_pred EeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEE
Q 012321 279 VIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVL 352 (466)
Q Consensus 279 ~vd~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv 352 (466)
.++. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|++ |+|++|+.+.. .....++.|+++
T Consensus 117 ~v~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~ 194 (382)
T 4eb5_A 117 YIPVGKYGEVDVSFIDQKLRDD-TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLT 194 (382)
T ss_dssp EECBCTTSCBCHHHHHHHCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEE
T ss_pred EeccCCCCccCHHHHHHHhcCC-CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEE
Confidence 8764 4899999999874 99999999999999999999999999999999 99999875432 122234789999
Q ss_pred eccccccccccCceEEEEEeChHH-HHHHHH----HHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHH
Q 012321 353 HSATKFIGGHNDVLAGSISGSGKL-VTQIRN----LHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~~el-i~~l~~----~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~~La~~ 423 (466)
.|+||+++..| .|+++++++. +..+.. ......++.+....+.+...+ +.++.+.++..++++.+.+.
T Consensus 195 ~s~sK~~g~~g---~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~ 271 (382)
T 4eb5_A 195 ISSNDIYGPKG---VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDN 271 (382)
T ss_dssp EETGGGTCCSS---CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eehHHhcCCCc---eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 99999876544 3666665542 111100 011111223333222222222 23456677788899999999
Q ss_pred HHcCCCcE
Q 012321 424 LEAHPKVK 431 (466)
Q Consensus 424 L~~~p~V~ 431 (466)
|++.|.+.
T Consensus 272 L~~~~~~~ 279 (382)
T 4eb5_A 272 VLKIEESY 279 (382)
T ss_dssp HTTSTTEE
T ss_pred HhhCCCeE
Confidence 99887764
No 67
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.89 E-value=3.7e-22 Score=200.90 Aligned_cols=215 Identities=17% Similarity=0.180 Sum_probs=163.5
Q ss_pred CchhHHHHHHHHHhhhCCCc----EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 208 GNPTTVVVEEKMSALEGAES----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~----~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
..+..+++++++++++|.+. .+++++|++|+. ++.+++++||+|+++++.|.+.. +...+...|+++..++.
T Consensus 33 ~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~v~~~ 109 (384)
T 3zrp_A 33 FVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGDR--WEQIFKRYPVNVKVLRPS 109 (384)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHHH--HHHHHTTSSCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchHH--HHHHHHHcCCcEEEecCC
Confidence 35678899999999999753 667777889999 99999999999999999987632 33445667888888864
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEecccc
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK 357 (466)
.|+++|+++++++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. ......+.|+++.|+||
T Consensus 110 ~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 189 (384)
T 3zrp_A 110 PGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQK 189 (384)
T ss_dssp TTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTS
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCcc
Confidence 3899999999874599999999999999999999999999999999999999876543 23334579999999999
Q ss_pred ccccccCceEEEEEeChHHHHHH-------------HHHHHHh-------C---CCchHHHHHHHHHhhHH-----HHHH
Q 012321 358 FIGGHNDVLAGSISGSGKLVTQI-------------RNLHHVL-------G---GALNPNAAYLIIRGMKT-----LHLR 409 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~~eli~~l-------------~~~~~~~-------G---~~ls~~~A~l~lrgL~t-----l~~R 409 (466)
+++|+.+ .|++++++++++++ ..+.... + ++.+......+...++. ++..
T Consensus 190 ~~~~~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~ 267 (384)
T 3zrp_A 190 ALGSAAG--LGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENR 267 (384)
T ss_dssp TTCCCSS--EEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cccCCCc--eEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 9976542 68999999988877 3322211 0 13333322222222222 4566
Q ss_pred HHHHHHHHHHHHHHHHcC
Q 012321 410 VQQQNSTALRMAKILEAH 427 (466)
Q Consensus 410 ~e~~~~na~~La~~L~~~ 427 (466)
.++..++++.+.+.|+++
T Consensus 268 ~~~~~~~~~~l~~~L~~~ 285 (384)
T 3zrp_A 268 IKRHTMVASAIRAGLEAL 285 (384)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHC
Confidence 777888899999999886
No 68
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.89 E-value=2.6e-22 Score=203.26 Aligned_cols=211 Identities=14% Similarity=0.181 Sum_probs=171.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC---
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~--- 283 (466)
.++..+++|+.+++++|.+++++++||++|+..++.++ +++||+|+++.+.|.++...+ ...|.++.+++..
T Consensus 34 ~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~ 109 (373)
T 3frk_A 34 LGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAV----SYTGAKPIFVEPDIRT 109 (373)
T ss_dssp SSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHH----HHHSCEEEEECEETTT
T ss_pred CCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEeccccc
Confidence 56889999999999999999999999999999999999 899999999999999976443 3457787777643
Q ss_pred ---CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccC--CcEEEeccc--
Q 012321 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT-- 356 (466)
Q Consensus 284 ---D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~g--aDivv~S~s-- 356 (466)
|+++|+++++++ +++|+ |+||+|.+.|+++|.++|+++|+++|+|++++.+........| .|+++.|++
T Consensus 110 ~~~d~~~l~~~l~~~-~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~ 185 (373)
T 3frk_A 110 YNIDPSLIESAITEK-TKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPA 185 (373)
T ss_dssp TEECGGGTGGGCCTT-EEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred cCcCHHHHHHhcCCC-CeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEeccccccEEEEeCcCC
Confidence 889999999874 99988 6889999999999999999999999999999876544333444 799999966
Q ss_pred cccccccCceEEEEEeC-hHHHHHHHHHHHHh------------CCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 012321 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL------------GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 357 K~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~------------G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~ 423 (466)
|++++++ .+|+++++ ++++++++...... ...+.++.+.+.+..++.++.+.++..++++++.+.
T Consensus 186 K~l~~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (373)
T 3frk_A 186 KNLGSLG--DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAG 263 (373)
T ss_dssp SSSCCSS--SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CccCccc--eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998855 37888876 56777777654311 123467777777667777777888888999999999
Q ss_pred HHcCC
Q 012321 424 LEAHP 428 (466)
Q Consensus 424 L~~~p 428 (466)
|++.+
T Consensus 264 l~~~~ 268 (373)
T 3frk_A 264 INNPN 268 (373)
T ss_dssp CCCTT
T ss_pred hccCc
Confidence 98876
No 69
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.89 E-value=7.6e-22 Score=199.04 Aligned_cols=224 Identities=14% Similarity=0.126 Sum_probs=163.5
Q ss_pred CccCCCCchhHHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEE
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g----~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v 277 (466)
+.|+..+...++.+.+.+.+.+| .++.+++++|++|+..++.+++++||+|+++.+.|.+....+ ...|.++
T Consensus 54 ~~y~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~ 129 (377)
T 3fdb_A 54 FGYQPDGSLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLL----SATQREG 129 (377)
T ss_dssp CSSCCSSCCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHH----HHHTCCE
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHH----HHcCCEE
Confidence 44554223444444454444433 357788888889999999999999999999999999866443 3457777
Q ss_pred EEeCCC---CHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc-----hh--
Q 012321 278 TVIDPA---DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----AL-- 344 (466)
Q Consensus 278 ~~vd~~---D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~-----pl-- 344 (466)
..++.. |+++|+++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....... ++
T Consensus 130 ~~~~~~~~~d~~~l~~~l~~~-~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 208 (377)
T 3fdb_A 130 IFIDATGGINLHDVEKGFQAG-ARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVS 208 (377)
T ss_dssp EEEECTTSCCHHHHHHHHHTT-CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSC
T ss_pred EEccCCCCCCHHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHH
Confidence 777654 899999999875 899999999999999985 6778888999999999999987532211 11
Q ss_pred --ccCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHH
Q 012321 345 --SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (466)
Q Consensus 345 --~~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~----tl~~R~e~~~~na 417 (466)
..+.++++.|+||.++.+|. +.|+++. ++++++.++........+.++..++.+...++ .+..+.++..+++
T Consensus 209 ~~~~~~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 287 (377)
T 3fdb_A 209 DTAASVCITITAPSKAWNIAGL-KCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNH 287 (377)
T ss_dssp HHHHHHEEEEECSTTTTTCGGG-CCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEeChHhccCcch-hheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 12345999999999977763 4676554 78898888876655545556655554444333 3566777888899
Q ss_pred HHHHHHHHc-CCCcE
Q 012321 418 LRMAKILEA-HPKVK 431 (466)
Q Consensus 418 ~~La~~L~~-~p~V~ 431 (466)
+.+.+.|++ .|.+.
T Consensus 288 ~~l~~~L~~~~~~~~ 302 (377)
T 3fdb_A 288 DFLLHEIPKRIPGAK 302 (377)
T ss_dssp HHHHHHHHHHSTTCE
T ss_pred HHHHHHHHhhCCCce
Confidence 999999988 66654
No 70
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.89 E-value=3.7e-22 Score=200.35 Aligned_cols=221 Identities=16% Similarity=0.157 Sum_probs=166.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD--~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
+|...+|++++++++|.+..+++++|++|+.+++.+++.+|| .|+++.+.|...+... ......|+++..++.
T Consensus 46 ~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 124 (357)
T 3lws_A 46 GAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQD-GLKELHPIETILVGAADRL 124 (357)
T ss_dssp ETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT-HHHHHSSCEEEECSCTTSC
T ss_pred ChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccc-hhhhccCcEEEEecCCCCC
Confidence 588999999999999999899999999999999999999998 6777666655432210 012234777777753
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCC-ccccc---HHHHHHHHHhcCCEEEEeCCCCC------CCccchhccCCcEEE
Q 012321 283 ADMEGLEAALNNNNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGADLVL 352 (466)
Q Consensus 283 ~D~e~Le~ai~~~~tklV~lesPsNPt-G~v~d---l~~I~ela~~~gillIvD~t~a~------~~~~~pl~~gaDivv 352 (466)
.|+++|+++. + +++|++++|+||+ |.+.+ +++|.++|+++|++||+|++|.. +.....+..+.|+++
T Consensus 125 ~d~~~l~~~~--~-~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~ 201 (357)
T 3lws_A 125 MTLDEIKALP--D-IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIY 201 (357)
T ss_dssp CCHHHHHTCC--S-CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEE
T ss_pred cCHHHHhcCc--C-cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEE
Confidence 4899999873 3 8999999999998 98874 88999999999999999999751 111222334579999
Q ss_pred eccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc--hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012321 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l--s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V 430 (466)
.|+||+++++. ||+++++++++++++.++..++... ....+..++..++....++++..++++++.+.|+++|++
T Consensus 202 ~s~sK~~~~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~ 278 (357)
T 3lws_A 202 ISFYKGLGGIA---GAILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNALPGV 278 (357)
T ss_dssp EESSSTTCCSS---CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTE
T ss_pred EeccccCCCCc---eEEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999997764 5999999999999988777665432 122233334556665566777888999999999999888
Q ss_pred EEEeCC
Q 012321 431 KRVHYP 436 (466)
Q Consensus 431 ~~V~~P 436 (466)
+.+..|
T Consensus 279 ~~~~~~ 284 (357)
T 3lws_A 279 HTTPEV 284 (357)
T ss_dssp EEESSS
T ss_pred eeccCC
Confidence 543333
No 71
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.89 E-value=7.9e-22 Score=202.16 Aligned_cols=213 Identities=18% Similarity=0.261 Sum_probs=173.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
.+...++++++++++|.++.+++++|++|+..++.++ +++||+|+++.+.|+++...+ ...|+++..++.
T Consensus 62 ~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~ 137 (399)
T 2oga_A 62 GPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASWLAV----SATGATPVPVEPHEDHP 137 (399)
T ss_dssp SHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECBCSSSS
T ss_pred chhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHH----HHCCCEEEEEecCCCCC
Confidence 4778999999999999989999999999999999999 899999999999999865433 446778777652
Q ss_pred -CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccC--CcEEEecc--cc
Q 012321 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSA--TK 357 (466)
Q Consensus 283 -~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~g--aDivv~S~--sK 357 (466)
.|+++|+++++++ +++|+ |+||+|.+.|+++|.++|+++|+++|+|++|+.+........+ .|+++.|+ +|
T Consensus 138 ~~d~~~l~~~i~~~-~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK 213 (399)
T 2oga_A 138 TLDPLLVEKAITPR-TRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGK 213 (399)
T ss_dssp SBCHHHHHHHCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTS
T ss_pred CcCHHHHHHhcCCC-CeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCc
Confidence 3799999999874 89887 5789999999999999999999999999999866432222233 69999999 69
Q ss_pred ccccccCceEEEEEeC-hHHHHHHHHHHHHh----------C--CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 012321 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHVL----------G--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~----------G--~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L 424 (466)
+++++| .+|+++++ ++++++++...... | ..+++..++++...++.+....++..++++++.+.|
T Consensus 214 ~~~~~G--~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L 291 (399)
T 2oga_A 214 NLGCFG--DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGL 291 (399)
T ss_dssp SSCCSS--CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcCC--ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999877 47888875 88888887654321 1 245778888877888888878888888999999999
Q ss_pred HcCCCcE
Q 012321 425 EAHPKVK 431 (466)
Q Consensus 425 ~~~p~V~ 431 (466)
++.|+++
T Consensus 292 ~~~~g~~ 298 (399)
T 2oga_A 292 AGLPGIG 298 (399)
T ss_dssp TTCTTCB
T ss_pred ccCCCcc
Confidence 9877653
No 72
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.89 E-value=9.8e-22 Score=198.34 Aligned_cols=215 Identities=13% Similarity=0.126 Sum_probs=163.6
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC-
Q 012321 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~- 283 (466)
|+++....|++++++++|. ++.+++++|++++.+++.++ +||+|++..|.|.+....+ ...|.++..++..
T Consensus 56 y~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~ 129 (364)
T 1lc5_A 56 YPDADYFHLHQALARHHQVPASWILAGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRAL----AQSGCEIRRWSLRE 129 (364)
T ss_dssp CCCTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHH----HHTTCEEEEEECCG
T ss_pred CCCCCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHH----HHcCCeEEEEeCCc
Confidence 3445678999999999986 35666677779999999888 7899999999999865443 3457777666532
Q ss_pred ----C-HHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc--cchh----ccCCc
Q 012321 284 ----D-MEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN--QKAL----SLGAD 349 (466)
Q Consensus 284 ----D-~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~--~~pl----~~gaD 349 (466)
+ ++++.+.+++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... ...+ ..+.+
T Consensus 130 ~~~~~~l~~~~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 208 (364)
T 1lc5_A 130 ADGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHI 208 (364)
T ss_dssp GGTTCCCTTHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTE
T ss_pred ccccchhHHHHHhccC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCE
Confidence 2 3556666655 4899999999999999998 89999999999999999999875331 1111 24678
Q ss_pred EEEeccccccccccCceEEEEE-eChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHHHH
Q 012321 350 LVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 350 ivv~S~sK~lgG~gdv~gG~vv-g~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t---l~~R~e~~~~na~~La~~L~ 425 (466)
+++.|+||+++.+| .+.|+++ ++++++++++.....+ ..++..++.+...++. ++.+.+++.++++.+.+.|+
T Consensus 209 i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 285 (364)
T 1lc5_A 209 WVLRSLTKFYAIPG-LRLGYLVNSDDAAMARMRRQQMPW--SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALC 285 (364)
T ss_dssp EEEEESTTTTTCTT-TCCEEEECCCHHHHHHHHHHSCTT--CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECchhhcCCc-cceEEEEECCHHHHHHHHHhCCCC--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998666 4578998 9999998887765433 4566666666555543 55666777888999999999
Q ss_pred cCCCcE
Q 012321 426 AHPKVK 431 (466)
Q Consensus 426 ~~p~V~ 431 (466)
++|++.
T Consensus 286 ~~~~~~ 291 (364)
T 1lc5_A 286 QLPLLT 291 (364)
T ss_dssp TSTTEE
T ss_pred cCCCCE
Confidence 888764
No 73
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.89 E-value=6.2e-22 Score=198.61 Aligned_cols=219 Identities=18% Similarity=0.194 Sum_probs=163.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCE--EEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~--VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
.++...+|++++++++|.+..+++++|++|+.+++.+++.+||+ |+++.+.|...+... ......|+++..++.
T Consensus 46 ~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~ 124 (359)
T 3pj0_A 46 NGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQD-GLKELQQITPLLLGTANQ 124 (359)
T ss_dssp BSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT-HHHHHHCCEEEECSCTTS
T ss_pred CCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcc-hHHHhcCceEEecCCcCC
Confidence 46889999999999999988899999999999999999989987 555555443321100 011224777777764
Q ss_pred -CCHHHHHHhccCCCceEEEEeCCCCCC-cccccHHH---HHHHHHhcCCEEEEeCCCCCCC------ccchhccCCcEE
Q 012321 283 -ADMEGLEAALNNNNVSLFFTESPTNPF-LRCVDVKL---VSDLCHKKGAIVCIDGTFATPL------NQKALSLGADLV 351 (466)
Q Consensus 283 -~D~e~Le~ai~~~~tklV~lesPsNPt-G~v~dl~~---I~ela~~~gillIvD~t~a~~~------~~~pl~~gaDiv 351 (466)
.|+++|+++ .+ ++++|++|+|+||+ |.+.++++ |.++|+++|++||+|+++.... ....+..+.|++
T Consensus 125 ~~d~~~l~~~-~~-~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~ 202 (359)
T 3pj0_A 125 LLTIDDIKSL-RE-PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSV 202 (359)
T ss_dssp CCCHHHHHTC-SS-CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEE
T ss_pred CcCHHHHHhc-cC-CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEE
Confidence 389999988 55 59999999999998 78887554 5999999999999999875322 122233578999
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCc---hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL---NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~l---s~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p 428 (466)
+.|+||+++++. +|+++++++++++++..+...+... .... ..+...++....++++..++++++.+.|+++|
T Consensus 203 ~~s~sK~~~~~~---gg~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~ 278 (359)
T 3pj0_A 203 YVSFYKGIGGIA---GAILAGNDDFVQEAKIWKRRYGGDLISLYPYI-LSADYYFEKRIGKMAEYFEAAKGLAERFNSCS 278 (359)
T ss_dssp EEESSSTTCCSS---CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHH-HHHHHHHHHHGGGHHHHHHHHHHHHHHHHTST
T ss_pred EEeccccCCCcc---eEEEECCHHHHHHHHHHHHHhCCCcchhHHHH-HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCC
Confidence 999999998874 5899999999999988776655332 2222 22233455545677788889999999999998
Q ss_pred CcEEE
Q 012321 429 KVKRV 433 (466)
Q Consensus 429 ~V~~V 433 (466)
++...
T Consensus 279 g~~~~ 283 (359)
T 3pj0_A 279 GVKTV 283 (359)
T ss_dssp TEEEE
T ss_pred Cceee
Confidence 87543
No 74
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.89 E-value=2.2e-21 Score=198.84 Aligned_cols=213 Identities=15% Similarity=0.148 Sum_probs=158.0
Q ss_pred HHHHHHHHHhhh----C--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 212 TVVVEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g--~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
...+++.+++++ | . ++.+++++|++|+.+++.+++++||+|++++++|.+....+ ...|+++..++.
T Consensus 80 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~ 155 (406)
T 1xi9_A 80 LPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLV----KFYGGKPVEYRTI 155 (406)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HHTTCEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHH----HHcCCEEEEeecC
Confidence 345666666554 3 2 46666677779999999999999999999999998865433 345666665542
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----cchhc--cC
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS--LG 347 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~----~~pl~--~g 347 (466)
.|+++|+++++++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.... ..... .+
T Consensus 156 ~~~~~~~d~~~l~~~l~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 234 (406)
T 1xi9_A 156 EEEDWQPDIDDIRKKITDR-TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKD 234 (406)
T ss_dssp GGGTSEECHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSS
T ss_pred CCcCCcCCHHHHHHhhCcC-ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCC
Confidence 3899999999874 999999999999999876 89999999999999999999876432 11122 35
Q ss_pred C-cEEEeccccccccccCceEEEEE--eCh----HHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHH
Q 012321 348 A-DLVLHSATKFIGGHNDVLAGSIS--GSG----KLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (466)
Q Consensus 348 a-Divv~S~sK~lgG~gdv~gG~vv--g~~----eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~n 416 (466)
. |+++.|+||+++++|. +.|+++ +++ +++++++...... ...++..++.+...+ +.+....++..++
T Consensus 235 ~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 312 (406)
T 1xi9_A 235 VPVIVMNGLSKVYFATGW-RLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKER 312 (406)
T ss_dssp SCEEEEEESTTTTCCGGG-CCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred ceEEEEeccccccCCCcc-EEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 6 8999999999986663 468888 888 9999888766543 333444333333333 3455566777888
Q ss_pred HHHHHHHHHcCCCcE
Q 012321 417 ALRMAKILEAHPKVK 431 (466)
Q Consensus 417 a~~La~~L~~~p~V~ 431 (466)
++.+.+.|++.|.+.
T Consensus 313 ~~~l~~~L~~~~~~~ 327 (406)
T 1xi9_A 313 RDYIYKRLNEIPGIS 327 (406)
T ss_dssp HHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHhCCCCe
Confidence 899999999887654
No 75
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.89 E-value=5.2e-22 Score=199.86 Aligned_cols=218 Identities=17% Similarity=0.122 Sum_probs=161.8
Q ss_pred CchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 208 GNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all----~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
..+...+|++++++++|.+ +.+++++|++|+..++.++. ++||+|+++.+.|++....+. .+...|+++..++
T Consensus 42 ~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~ 120 (384)
T 1eg5_A 42 ANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMK-YLSMKGFKVKYVP 120 (384)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-HHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHH-HHHhcCCEEEEEc
Confidence 3456789999999999974 67777888899999999987 799999999999998655443 2345688888776
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC--CEEEEeCCCCCCCc-cchhccCCcEEEe
Q 012321 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLN-QKALSLGADLVLH 353 (466)
Q Consensus 282 ~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~g--illIvD~t~a~~~~-~~pl~~gaDivv~ 353 (466)
. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++| +++|+|++|+.+.. .....++.|+++.
T Consensus 121 ~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~ 199 (384)
T 1eg5_A 121 VDSRGVVKLEELEKLVDED-TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASF 199 (384)
T ss_dssp BCTTSCBCHHHHHHHCCTT-EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEE
T ss_pred cCCCCccCHHHHHHHhCCC-CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEe
Confidence 4 4899999999874 999999999999999999999999999999 99999999763321 1222347899999
Q ss_pred ccccccccccCceEEEEEeChHH--HHHHHHH---HHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHH
Q 012321 354 SATKFIGGHNDVLAGSISGSGKL--VTQIRNL---HHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~el--i~~l~~~---~~~~G~~ls~~~A~l~lrgL~----tl~~R~e~~~~na~~La~~L 424 (466)
|+||+++.+| .|++++++++ ...+... ......+.+....+.+...++ .+....++..++++.+.+.|
T Consensus 200 s~sK~~g~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 276 (384)
T 1eg5_A 200 SAHKFHGPKG---VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGL 276 (384)
T ss_dssp EGGGGTSCTT---CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHhcCCCc---eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 9999987665 4888888775 2221110 001122344443333333333 34566777888999999999
Q ss_pred HcCCCcE
Q 012321 425 EAHPKVK 431 (466)
Q Consensus 425 ~~~p~V~ 431 (466)
++ ++++
T Consensus 277 ~~-~g~~ 282 (384)
T 1eg5_A 277 MN-LGAH 282 (384)
T ss_dssp HT-TTCE
T ss_pred CC-CCeE
Confidence 87 5553
No 76
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.89 E-value=7.1e-22 Score=203.03 Aligned_cols=211 Identities=9% Similarity=0.078 Sum_probs=160.0
Q ss_pred hHHHHHHHHHhhh----CC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 211 TTVVVEEKMSALE----GA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~lA~l~----g~-----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
....|++.+++++ |. ++.+++++|++|+.+++.+++++||+|+++.|.|.+....+ ...|.++..++
T Consensus 86 g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~ 161 (404)
T 2o1b_A 86 GKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGV----LLADGKPVPLN 161 (404)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHH----HHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHCCCEEEEec
Confidence 3456777777766 75 34566666679999999999999999999999999966543 34566666554
Q ss_pred C------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----cchhcc--
Q 012321 282 P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALSL-- 346 (466)
Q Consensus 282 ~------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~----~~pl~~-- 346 (466)
. .|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... ......
T Consensus 162 ~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 240 (404)
T 2o1b_A 162 LEPPHYLPDWSKVDSQIID-KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASEN 240 (404)
T ss_dssp CCTTTCCCCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTT
T ss_pred cCcccCcCCHHHHHHhhcc-CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCC
Confidence 2 467888888875 4899999999999999985 78899999999999999999876432 112222
Q ss_pred --CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH----HHHHHHHHHHHHHHH
Q 012321 347 --GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 420 (466)
Q Consensus 347 --gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t----l~~R~e~~~~na~~L 420 (466)
+.++++.|+||+++.+| .+.|+++++++++++++........+.++...+.+...++. ++.+.++..++++.+
T Consensus 241 ~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 319 (404)
T 2o1b_A 241 GKDVAIEIYSLSKGYNMSG-FRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRF 319 (404)
T ss_dssp HHHHEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecchhccCch-hheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 45799999999998666 45789999999999998877666555666655555444433 555566677888899
Q ss_pred HHHHHcC
Q 012321 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 320 ~~~L~~~ 326 (404)
T 2o1b_A 320 EAMLAKA 326 (404)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999876
No 77
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.89 E-value=2e-21 Score=201.24 Aligned_cols=218 Identities=14% Similarity=0.136 Sum_probs=164.4
Q ss_pred chhHHHHHHHHHhhhC-------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 209 NPTTVVVEEKMSALEG-------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g-------~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
.+...++++.++++++ .++.+++++|++|+.+++..++++||+|+++.|.|.+.... +...|+++..++
T Consensus 95 ~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~ 170 (427)
T 3dyd_A 95 SIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTL----AESMGIEVKLYN 170 (427)
T ss_dssp TTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHTTCEEEEEE
T ss_pred CCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEEe
Confidence 3457789999999987 35677788888999999999999999999999999885533 344577766654
Q ss_pred C-------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----cchhcc
Q 012321 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL 346 (466)
Q Consensus 282 ~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~-----~~pl~~ 346 (466)
. .|+++|+++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... .....+
T Consensus 171 ~~~~~~~~~d~~~l~~~l~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~ 249 (427)
T 3dyd_A 171 LLPEKSWEIDLKQLEYLIDEK-TACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATL 249 (427)
T ss_dssp EEGGGTTEECHHHHHSSCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGG
T ss_pred cccccCCCCCHHHHHHHhccC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHh
Confidence 2 3899999999875 999999999999999999 99999999999999999999875321 111223
Q ss_pred CCc---EEEeccccccccccCceEEEEEeC-------hHHHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHH
Q 012321 347 GAD---LVLHSATKFIGGHNDVLAGSISGS-------GKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQ 411 (466)
Q Consensus 347 gaD---ivv~S~sK~lgG~gdv~gG~vvg~-------~eli~~l~~~~~~~G~~ls~~~A~l~lrgL-----~tl~~R~e 411 (466)
+.| +++.|+||.++++|. +.|+++++ +++++.+....... ...++..+..+...+ +.+..+.+
T Consensus 250 ~~~~~vi~~~S~sK~~~~~G~-riG~~~~~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~a~~~~L~~~~~~~~~~~~~ 327 (427)
T 3dyd_A 250 STDVPILSCGGLAKRWLVPGW-RLGWILIHDRRDIFGNEIRDGLVKLSQRI-LGPCTIVQGALKSILCRTPGEFYHNTLS 327 (427)
T ss_dssp CSSCCEEEEEESTTTSSCGGG-CCEEEEEECSTTSSHHHHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CCCCcEEEEeeccccCCCcCc-ceEEEEecCcchhhHHHHHHHHHHHHhcc-CCCCHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 333 778999999988874 45777765 46777776654332 233444444333333 44667778
Q ss_pred HHHHHHHHHHHHHHcCCCcEEE
Q 012321 412 QQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~~V 433 (466)
++.++++.+.+.|+++|.+..+
T Consensus 328 ~~~~~~~~l~~~L~~~~g~~~~ 349 (427)
T 3dyd_A 328 FLKSNADLCYGALAAIPGLRPV 349 (427)
T ss_dssp HHHHHHHHHHHHHHHSTTEEEE
T ss_pred HHHHHHHHHHHHHhcCCCceec
Confidence 8888999999999999887543
No 78
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.89 E-value=8.8e-22 Score=197.41 Aligned_cols=218 Identities=15% Similarity=0.166 Sum_probs=164.7
Q ss_pred CCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-
Q 012321 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd- 281 (466)
.+|+++...+++++++++++. ++.+++++|++|+.+++..+ |+|+++.+.|.+....+ ...|+++..++
T Consensus 56 ~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~~----~~~g~~~~~~~~ 127 (361)
T 3ftb_A 56 GVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----EKILIIVPSYAEYEINA----KKHGVSVVFSYL 127 (361)
T ss_dssp GSCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC----SEEEEEESCCTHHHHHH----HHTTCEEEEEEC
T ss_pred cCCCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc----CcEEEecCChHHHHHHH----HHcCCeEEEeec
Confidence 344567789999999999985 45666677779999988776 99999999999865443 34577777765
Q ss_pred ----CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc---cchh----ccC
Q 012321 282 ----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---QKAL----SLG 347 (466)
Q Consensus 282 ----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~---~~pl----~~g 347 (466)
..+++++++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... .... ..+
T Consensus 128 ~~~~~~~~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 205 (361)
T 3ftb_A 128 DENMCIDYEDIISKIDD--VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYS 205 (361)
T ss_dssp CTTSCCCHHHHHHHTTT--CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCS
T ss_pred CcccCCCHHHHHHhccC--CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCC
Confidence 3467999999976 899999999999999985 67788888899999999999874332 1111 223
Q ss_pred CcEEEeccccccccccCceEEEEE-eChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHH
Q 012321 348 ADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 348 aDivv~S~sK~lgG~gdv~gG~vv-g~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~ 423 (466)
.++++.|+||.++.+| .+.|+++ +++++++.++.....+ +.++..++.+...+ +.+..+.++..++++.+.+.
T Consensus 206 ~~i~~~s~sK~~~~~G-~r~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 282 (361)
T 3ftb_A 206 CLFIIRAMTKFFAMPG-IRFGYGITNNKEIAAKIKAKQNPW--NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEE 282 (361)
T ss_dssp SEEEEEESSSTTSCGG-GCCEEEEESCHHHHHHHHTTSCTT--CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeeChhhcCCCC-cceeEEEeCCHHHHHHHHhhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 4588999999998666 3567777 8999998887655443 34555555444443 45667778888999999999
Q ss_pred HHcCCCcEEEeC
Q 012321 424 LEAHPKVKRVHY 435 (466)
Q Consensus 424 L~~~p~V~~V~~ 435 (466)
|+++|.+.++..
T Consensus 283 l~~~~~~~~~~~ 294 (361)
T 3ftb_A 283 LNKIGFIKRVFS 294 (361)
T ss_dssp HHHSSSEEEEEC
T ss_pred HHhCCCCceecC
Confidence 999988863443
No 79
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.89 E-value=2.5e-21 Score=198.82 Aligned_cols=212 Identities=13% Similarity=0.123 Sum_probs=160.8
Q ss_pred hhHHHHHHHHHhhh----CC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 210 PTTVVVEEKMSALE----GA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~lA~l~----g~-----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
+....|++.+++++ |. ++.+++++|++|+.+++.+++++||+|+++.+.|++....+ ...|.++..+
T Consensus 75 ~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~ 150 (412)
T 2x5d_A 75 RGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGA----VIAGAQVRSV 150 (412)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HHHTCEEEEE
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHcCCEEEEe
Confidence 33567777777776 73 36777788889999999999999999999999999866443 3356666665
Q ss_pred CC-------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----chhc
Q 012321 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS 345 (466)
Q Consensus 281 d~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~pl~ 345 (466)
+. .|+++|++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... ....
T Consensus 151 ~~~~~~~~~~d~~~l~~~i~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 229 (412)
T 2x5d_A 151 PLVPGIDFFNELERAIRESIP-KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQ 229 (412)
T ss_dssp ECSTTSCHHHHHHHHHHTEES-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred ecCCccCCCCCHHHHHHhccc-CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhh
Confidence 43 257889999986 4899999999999999986 688999999999999999998764321 1111
Q ss_pred ----cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHH
Q 012321 346 ----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (466)
Q Consensus 346 ----~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~----tl~~R~e~~~~na 417 (466)
.+.|+++.|+||+++.+| .+.|++++++++++.++......+.+.++...+.+...++ .+....+++.+++
T Consensus 230 ~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 308 (412)
T 2x5d_A 230 VPGAKDIAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRR 308 (412)
T ss_dssp STTGGGTEEEEEECC-CCSCTT-SCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHH
T ss_pred ccCccCcEEEEecCccccCCcc-cceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 367899999999998666 3579999999999998877766555556655554444333 3566667778888
Q ss_pred HHHHHHHHcC
Q 012321 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+.+.+.|+++
T Consensus 309 ~~l~~~L~~~ 318 (412)
T 2x5d_A 309 DVLVKGLREA 318 (412)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHC
Confidence 8899988864
No 80
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.89 E-value=3e-21 Score=196.36 Aligned_cols=209 Identities=14% Similarity=0.144 Sum_probs=160.8
Q ss_pred HHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 212 TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g----~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
...|++.+++++ | .++.+++++|++|+.+++.+++++||+|+++.|.|.+....+ ...|+++..++.
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~v~~~ 145 (391)
T 3h14_A 70 LPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQIL----RALGLVPVDLPTA 145 (391)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HHTTCEEEEEECC
T ss_pred hHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHH----HHcCCEEEEeecC
Confidence 455666666554 3 266778888889999999999999999999999999866443 456777777653
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----cchhcc-CC
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALSL-GA 348 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~----~~pl~~-ga 348 (466)
.|+++|+++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... ...... +.
T Consensus 146 ~~~~~~~d~~~l~~~----~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 221 (391)
T 3h14_A 146 PENRLQPVPADFAGL----DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDE 221 (391)
T ss_dssp GGGTTSCCHHHHTTS----CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSS
T ss_pred cccCCCCCHHHHHhc----CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCC
Confidence 278888766 3899999999999999987 88899999999999999999875332 122222 45
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~---lrgL~tl~~R~e~~~~na~~La~~L~ 425 (466)
++++.|+||.++.+| .+.|++++++++++.++........+.++..++.+ ++..+.+..+.+++.++++.+.+.|+
T Consensus 222 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 300 (391)
T 3h14_A 222 CYVINSFSKYFSMTG-WRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLP 300 (391)
T ss_dssp SEEEEESSSTTCCTT-SCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEechhccCCcc-ceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999998666 45799999999999998877766666666554443 33445677777888889999999998
Q ss_pred cCCC
Q 012321 426 AHPK 429 (466)
Q Consensus 426 ~~p~ 429 (466)
+++.
T Consensus 301 ~~~~ 304 (391)
T 3h14_A 301 KAGF 304 (391)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 7643
No 81
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.89 E-value=4.1e-21 Score=197.10 Aligned_cols=210 Identities=15% Similarity=0.187 Sum_probs=154.1
Q ss_pred HHHHHHHHHhh----hCC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 212 TVVVEEKMSAL----EGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~lA~l----~g~----e-~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
...|++.++++ +|. + +.+++++|++|+.+++.+++++||+|+++.+.|++....+ ...|+++..++.
T Consensus 64 ~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~----~~~g~~~~~v~~ 139 (411)
T 2o0r_A 64 SAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVV----AMAGAHRVTVPL 139 (411)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHH----HHcCCEEEEeec
Confidence 34555555555 463 3 5666666779999999999999999999999999865443 345666665542
Q ss_pred --------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----ch--h
Q 012321 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KA--L 344 (466)
Q Consensus 283 --------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~p--l 344 (466)
.|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .. +
T Consensus 140 ~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 218 (411)
T 2o0r_A 140 VPDGRGFALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGF 218 (411)
T ss_dssp EEETTEEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred cccccCCCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhc
Confidence 589999999987 4999999999999999986 589999999999999999998754321 11 1
Q ss_pred --ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHH---HHHH-hhHHHHHHHHHHHHHHH
Q 012321 345 --SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAY---LIIR-GMKTLHLRVQQQNSTAL 418 (466)
Q Consensus 345 --~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~---l~lr-gL~tl~~R~e~~~~na~ 418 (466)
..+.|+++.|++|+++.+| .+.|++++++++++.++......+.+.++.... .+++ +.+.+....++..++++
T Consensus 219 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 297 (411)
T 2o0r_A 219 DGMAERTITISSAAKMFNCTG-WKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRD 297 (411)
T ss_dssp TTTGGGEEEEEEHHHHTTCTT-TCEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeechhhcCCcc-ceEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 1457999999999998776 467999999999998887665433333332222 2232 22335555667778888
Q ss_pred HHHHHHHcC
Q 012321 419 RMAKILEAH 427 (466)
Q Consensus 419 ~La~~L~~~ 427 (466)
.+.+.|+++
T Consensus 298 ~l~~~L~~~ 306 (411)
T 2o0r_A 298 RLAAGLTEI 306 (411)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 888888765
No 82
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.88 E-value=6e-22 Score=204.25 Aligned_cols=211 Identities=17% Similarity=0.165 Sum_probs=159.7
Q ss_pred HHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhc--cCCC--EEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 212 TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALV--PAGG--HIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 212 ~~~Lee~lA~l~g--------~e~~v~~~SG~aAi~~al~all--~pGD--~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
...+++.++++++ .++.+++++|++|+.+++.+++ ++|| +|+++.++|.+....+ ...|+++..
T Consensus 84 ~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~----~~~g~~~~~ 159 (437)
T 3g0t_A 84 LPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQC----RILGQKFES 159 (437)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHH----HHHTCCCEE
T ss_pred hHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHH----HHcCCEEEE
Confidence 4677777777665 3566667777799999999998 9999 9999999999866444 334666666
Q ss_pred eCC------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc---------
Q 012321 280 IDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--------- 341 (466)
Q Consensus 280 vd~------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~--------- 341 (466)
++. .|+++|+++++..++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.....
T Consensus 160 v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~ 239 (437)
T 3g0t_A 160 FDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEP 239 (437)
T ss_dssp EEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSS
T ss_pred EeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCccccc
Confidence 543 27899999994335999999999999999986 777899999999999999998753221
Q ss_pred ---chh--ccCCcEEEeccccccccccCceEEEEEeChHHHH-H-----------------HHHHHHHhCCCchHHHHHH
Q 012321 342 ---KAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-Q-----------------IRNLHHVLGGALNPNAAYL 398 (466)
Q Consensus 342 ---~pl--~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~-~-----------------l~~~~~~~G~~ls~~~A~l 398 (466)
..+ ..+.++++.|+||+++.+| .+.|++++++++++ . ++........+.++..++.
T Consensus 240 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 318 (437)
T 3g0t_A 240 LYQPSVANYTDNYILALSSSKAFSYAG-QRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWG 318 (437)
T ss_dssp CCCCCGGGTCSCEEEEEESTTTTSCGG-GCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHH
T ss_pred chhhccCCCCCcEEEEEcCccCCCCcc-ceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHH
Confidence 111 2466799999999998666 45799999999888 7 6665554444555655555
Q ss_pred HHHhhHH-------HHHHHHHHHHHHHHHHHHHHcC
Q 012321 399 IIRGMKT-------LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 399 ~lrgL~t-------l~~R~e~~~~na~~La~~L~~~ 427 (466)
+...++. +..+.+++.++++.+.+.|+++
T Consensus 319 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 354 (437)
T 3g0t_A 319 MAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN 354 (437)
T ss_dssp HHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5444443 5667788888999999999987
No 83
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.88 E-value=3e-21 Score=196.17 Aligned_cols=213 Identities=16% Similarity=0.120 Sum_probs=161.4
Q ss_pred chhHHHHHHHHHhhhC-----CC-cEEEeCCHHHHHHHHHHHhccCC-----CEEEEcCCCccchHHHHHhhcccCCcEE
Q 012321 209 NPTTVVVEEKMSALEG-----AE-STVIMASGMSASTVMLLALVPAG-----GHIVTTTDCYRKTRIFIETVLPKMGITA 277 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g-----~e-~~v~~~SG~aAi~~al~all~pG-----D~VLv~~~~y~~t~~~~~~~l~~~gi~v 277 (466)
.+.++++.+.+.+.+| .+ +.+++++|++|+.+++.+++++| |+|+++.|.|.+.... +...|.++
T Consensus 69 ~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~----~~~~g~~~ 144 (396)
T 3jtx_A 69 PELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGA----TLLGGGEI 144 (396)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHH----HHHTTCEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHH----HHHcCCEE
Confidence 3445555565555556 34 67777777799999999999997 7999999999886543 34467777
Q ss_pred EEeCC------CCHHHHHHhccCCCceEEEEeCCCCCCcccccHH---HHHHHHHhcCCEEEEeCCCCCCCccc--h---
Q 012321 278 TVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQK--A--- 343 (466)
Q Consensus 278 ~~vd~------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~---~I~ela~~~gillIvD~t~a~~~~~~--p--- 343 (466)
..++. .|+++|+++++++ +++|++++|+||||.+++.+ +|.++|+++|+++|+|++|....... +
T Consensus 145 ~~v~~~~~g~~~d~~~l~~~~~~~-~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 223 (396)
T 3jtx_A 145 HFANCPAPSFNPDWRSISEEVWKR-TKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGC 223 (396)
T ss_dssp EEEECCTTTCCCCGGGSCHHHHHT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCH
T ss_pred EEeecCCCCCccCHHHHHHhhccC-cEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchH
Confidence 66643 3778888888774 99999999999999998755 59999999999999999987643211 1
Q ss_pred h--------ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHH
Q 012321 344 L--------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQ 412 (466)
Q Consensus 344 l--------~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~ 412 (466)
+ ..+.++++.|+||.++.+| .+.|++++++++++.++......+.+.++..++.+...+ +.+..+.++
T Consensus 224 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 302 (396)
T 3jtx_A 224 LQAAAQLGRSRQKLLMFTSLSKRSNVPG-LRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRL 302 (396)
T ss_dssp HHHHHHTTCCCTTEEEEEESTTTSSCGG-GCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HhhhhhcccccCcEEEEeccccccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHH
Confidence 1 2567899999999988776 457899999999999988777766666666555544433 456667777
Q ss_pred HHHHHHHHHHHHHcC
Q 012321 413 QNSTALRMAKILEAH 427 (466)
Q Consensus 413 ~~~na~~La~~L~~~ 427 (466)
+.++.+.+.+.|+++
T Consensus 303 ~~~~~~~l~~~l~~~ 317 (396)
T 3jtx_A 303 YQEKFERVIPILQQV 317 (396)
T ss_dssp HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhc
Confidence 888888999999875
No 84
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.88 E-value=6e-21 Score=196.77 Aligned_cols=210 Identities=16% Similarity=0.186 Sum_probs=155.1
Q ss_pred HHHHHHHHHhh----hCC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-
Q 012321 212 TVVVEEKMSAL----EGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (466)
Q Consensus 212 ~~~Lee~lA~l----~g~----e-~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd- 281 (466)
...|++.++++ +|. + +.+++++|++|+.+++.+++++||+|++..|.|++....+ ...|.++..++
T Consensus 79 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~ 154 (429)
T 1yiz_A 79 HPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMV----KAAGGIPRFIPL 154 (429)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEEeC
Confidence 34555555555 462 4 5666666679999999999999999999999999866443 34566665553
Q ss_pred --------------CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----
Q 012321 282 --------------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (466)
Q Consensus 282 --------------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~---- 340 (466)
..|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.....
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~ 233 (429)
T 1yiz_A 155 KPNKTGGTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFE 233 (429)
T ss_dssp BCCCSSSSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSC
T ss_pred CcccccccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCC
Confidence 2579999999976 4999999999999999984 89999999999999999999875321
Q ss_pred ---cchh--ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH-----------
Q 012321 341 ---QKAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----------- 404 (466)
Q Consensus 341 ---~~pl--~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~----------- 404 (466)
...+ ..+.|+++.|+||.++++| .+.|++++++++++.++........+.++..+..+...++
T Consensus 234 ~~~~~~~~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 312 (429)
T 1yiz_A 234 HIRICTLPGMWERTITIGSAGKTFSLTG-WKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPEC 312 (429)
T ss_dssp CCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTS
T ss_pred CcChhhccCCcCceEEEecchhccCCCC-cceEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHH
Confidence 1111 2467899999999998776 4579999999999988876654444444444333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Q 012321 405 TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+....++..++++.+.+.|+++
T Consensus 313 ~~~~~~~~~~~~~~~l~~~L~~~ 335 (429)
T 1yiz_A 313 YFNSISGELMAKRDYMASFLAEV 335 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 34555566777888888888875
No 85
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.88 E-value=2.5e-21 Score=196.19 Aligned_cols=215 Identities=9% Similarity=0.021 Sum_probs=158.2
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
.+....+++++++++|.+ +.+++++|++|+.+++.+++++||+|+++++.|.+.. +...+...|+++..++.
T Consensus 41 ~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 118 (392)
T 2z9v_A 41 QLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKG--FGYWAKRYSPHLLEIEVPYNE 118 (392)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHHCSCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHHcCCceEEeeCCCCC
Confidence 345789999999999973 5666677789999999999999999999999998753 22333445777666643
Q ss_pred -CCHHHHHHhccC-CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEecccccc
Q 012321 283 -ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (466)
Q Consensus 283 -~D~e~Le~ai~~-~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK~l 359 (466)
.|+++|++++++ .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......+.|+++.|+||++
T Consensus 119 ~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~ 198 (392)
T 2z9v_A 119 AIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCL 198 (392)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTT
T ss_pred CCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccc
Confidence 589999999942 2489999999999999999999999999999999999999875432 2223457899999999987
Q ss_pred ccccCceEEEEEeChHHHHHHHHHH--------------------HHhCCCchHHHHH---HHHHhhHH--HHHHHHHHH
Q 012321 360 GGHNDVLAGSISGSGKLVTQIRNLH--------------------HVLGGALNPNAAY---LIIRGMKT--LHLRVQQQN 414 (466)
Q Consensus 360 gG~gdv~gG~vvg~~eli~~l~~~~--------------------~~~G~~ls~~~A~---l~lrgL~t--l~~R~e~~~ 414 (466)
+++.. .|+++++++++++++... ....++.+..... .+++.+.. ++...++..
T Consensus 199 ~~~~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 276 (392)
T 2z9v_A 199 GAPPG--LTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHA 276 (392)
T ss_dssp CCCSC--CEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cCCCc--eeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 76532 389999999888876421 0111223333222 22222222 455667778
Q ss_pred HHHHHHHHHHHcC
Q 012321 415 STALRMAKILEAH 427 (466)
Q Consensus 415 ~na~~La~~L~~~ 427 (466)
++++++.+.|++.
T Consensus 277 ~~~~~l~~~L~~~ 289 (392)
T 2z9v_A 277 LTAKAMRAGVTAM 289 (392)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 8888898888875
No 86
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.88 E-value=9e-21 Score=196.06 Aligned_cols=221 Identities=14% Similarity=0.142 Sum_probs=160.2
Q ss_pred hhHHHHHHHHHhhhCCC----------cEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEE
Q 012321 210 PTTVVVEEKMSALEGAE----------STVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e----------~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~ 278 (466)
+.++++.+.+++.+|.+ +.+++++| ++|+.+++.+++++||+|++++|+|.+.... +...|.++.
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~ 157 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQS----LHPLGCNII 157 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH----HGGGTCEEE
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH----HHHcCCEEE
Confidence 45667777777766742 35555555 5999999999999999999999999986543 445677777
Q ss_pred EeCC----CCHHHHHHhccC-----------CCceEEEE-eCCCCCCcccccHH---HHHHHHHhcCCEEEEeCCCCCCC
Q 012321 279 VIDP----ADMEGLEAALNN-----------NNVSLFFT-ESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 279 ~vd~----~D~e~Le~ai~~-----------~~tklV~l-esPsNPtG~v~dl~---~I~ela~~~gillIvD~t~a~~~ 339 (466)
.++. .|+++|+++++. .++++|++ ++|+||||.+++.+ +|.++|+++|+++|+|++|....
T Consensus 158 ~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~ 237 (425)
T 2r2n_A 158 NVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ 237 (425)
T ss_dssp EECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred EeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 6653 478999998862 24889877 68999999999755 99999999999999999986321
Q ss_pred c-----cchhc---cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH------
Q 012321 340 N-----QKALS---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------ 405 (466)
Q Consensus 340 ~-----~~pl~---~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t------ 405 (466)
. ..... .+.++++.|+||+++ +| .+.|+++++++++++++........+.+++.++.+...++.
T Consensus 238 ~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~ 315 (425)
T 2r2n_A 238 FNKFRVPTFLSMDVDGRVIRADSFSKIIS-SG-LRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGF 315 (425)
T ss_dssp SSSSCCCCTGGGCTTSCEEEEEESTTTTC-ST-TCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccccCCCCCEEEEccchhhcc-Cc-cceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchH
Confidence 1 11112 245699999999997 65 46799999999999998877665555666655554444433
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCC
Q 012321 406 ---LHLRVQQQNSTALRMAKILEA-HPKVKRVHYP 436 (466)
Q Consensus 406 ---l~~R~e~~~~na~~La~~L~~-~p~V~~V~~P 436 (466)
+....+++.++++.+.+.|++ .|.+..+..|
T Consensus 316 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p 350 (425)
T 2r2n_A 316 MAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVP 350 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCC
Confidence 334445667788888888887 4665433333
No 87
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.88 E-value=1.4e-21 Score=198.45 Aligned_cols=220 Identities=15% Similarity=0.138 Sum_probs=164.4
Q ss_pred cCCCCchhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e---~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
|+....+..+++++++++++|.+ +.+++++|++|+..++.+++++||+|+++++.|.+.. +...++..|.++..+
T Consensus 61 ~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v 138 (393)
T 1vjo_A 61 LDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNR--LVDMAGRYGADVRTI 138 (393)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHH--HHHHHHHcCCceEEE
Confidence 43323467889999999999974 4566677779999999999999999999999998721 223344567777776
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEec
Q 012321 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (466)
Q Consensus 281 d~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S 354 (466)
+. .|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. ......+.|+++.|
T Consensus 139 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s 218 (393)
T 1vjo_A 139 SKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSC 218 (393)
T ss_dssp ECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECC
T ss_pred ecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEc
Confidence 52 6899999999761389999999999999999999999999999999999999884321 12223578999999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHHH--------------------HHhCCCchHHHHHHHHHhhHH-----HHHH
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH--------------------HVLGGALNPNAAYLIIRGMKT-----LHLR 409 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~~--------------------~~~G~~ls~~~A~l~lrgL~t-----l~~R 409 (466)
+||++++++ ..|+++++++++++++... ....++.+....+.+...++. +...
T Consensus 219 ~sK~l~~~~--~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~ 296 (393)
T 1vjo_A 219 SQKGLGCSP--GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANC 296 (393)
T ss_dssp SSSTTCSCS--SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred CcccccCCC--ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHH
Confidence 999999887 3599999999888774320 001114455444433334433 3456
Q ss_pred HHHHHHHHHHHHHHHHcC
Q 012321 410 VQQQNSTALRMAKILEAH 427 (466)
Q Consensus 410 ~e~~~~na~~La~~L~~~ 427 (466)
.++..++++.+.+.|++.
T Consensus 297 ~~~~~~~~~~l~~~L~~~ 314 (393)
T 1vjo_A 297 WQRHQKNVEYLWERLEDI 314 (393)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 677888899999999876
No 88
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.4e-21 Score=200.90 Aligned_cols=210 Identities=14% Similarity=0.161 Sum_probs=154.6
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC--
Q 012321 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-- 281 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd-- 281 (466)
...|++.+++++ |. ++.+++++|++|+.+++.+++++||+|++.+|.|.+....+ ...|.++..++
T Consensus 97 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~ 172 (447)
T 3b46_A 97 RPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNI----ELCGGKVVYVPIN 172 (447)
T ss_dssp CHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHH----HHcCCEEEEEeCC
Confidence 345555555554 43 34566666679999999999999999999999999866543 33455554442
Q ss_pred ---------------CCCHHHHHHhccCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCc---
Q 012321 282 ---------------PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (466)
Q Consensus 282 ---------------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~---dl~~I~ela~~~gillIvD~t~a~~~~--- 340 (466)
..|+++|++++++ ++++|++++|+||||.++ ++++|+++|+++|+++|+|++|.....
T Consensus 173 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~ 251 (447)
T 3b46_A 173 PPKELDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS 251 (447)
T ss_dssp CCGGGGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC
T ss_pred CccccccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCC
Confidence 2479999999986 499999999999999996 588999999999999999999875322
Q ss_pred ---cchh---ccCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH------HH
Q 012321 341 ---QKAL---SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LH 407 (466)
Q Consensus 341 ---~~pl---~~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t------l~ 407 (466)
...+ ..+.|+++.|+||+++.+|+ +.|++++ ++++++.++........+.++...+.+...++. +.
T Consensus 252 ~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~-riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~ 330 (447)
T 3b46_A 252 FTRIATLSPEIGQLTLTVGSAGKSFAATGW-RIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFE 330 (447)
T ss_dssp CCCGGGSCHHHHTTEEEEEEHHHHTTCTTS-CCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CcCHHHcCCCCCCcEEEEecCchhcCCcch-hhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHH
Confidence 1111 34789999999999987774 5799999 999999888766544444444444333333332 44
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 012321 408 LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 408 ~R~e~~~~na~~La~~L~~~ 427 (466)
...+++.++++.+.+.|+++
T Consensus 331 ~~~~~~~~~~~~l~~~L~~~ 350 (447)
T 3b46_A 331 KMRQEYINKFKIFTSIFDEL 350 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHC
Confidence 45566778888888888875
No 89
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.88 E-value=2.9e-21 Score=196.59 Aligned_cols=223 Identities=16% Similarity=0.127 Sum_probs=166.6
Q ss_pred CCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccC----------CCEEEEcCCCccchHHHHHhhc
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA----------GGHIVTTTDCYRKTRIFIETVL 270 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~p----------GD~VLv~~~~y~~t~~~~~~~l 270 (466)
.+.+..+.++..+++++++++++|.++++++++|++|+..++..+..+ ||+|++..+.|++.........
T Consensus 69 ~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 148 (392)
T 3ruy_A 69 TLTSRAFHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMS 148 (392)
T ss_dssp SCCCTTSEETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTC
T ss_pred cccccccCCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhcc
Confidence 344455678999999999999999888999999999999999877654 6899999999976543322211
Q ss_pred cc---------CCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCC
Q 012321 271 PK---------MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 271 ~~---------~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~ 337 (466)
.. ....+..++..|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~ 227 (392)
T 3ruy_A 149 SNEEYKRGFGPMLPGIIVIPYGDLEALKAAITP-NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTG 227 (392)
T ss_dssp SCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCT-TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTT
T ss_pred CChhhccccCCCCCCCeeeCcccHHHHHHHhcc-CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhC
Confidence 11 1123555666799999999986 4999999999999999998 99999999999999999999853
Q ss_pred C-C-----ccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHH
Q 012321 338 P-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLR 409 (466)
Q Consensus 338 ~-~-----~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl--~~R 409 (466)
. . .........|++ ++||.++| |..++|++++++++++.++..........++..+..+...++.+ +..
T Consensus 228 ~~~~g~~~~~~~~~~~~d~~--~~SK~l~g-G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 304 (392)
T 3ruy_A 228 LGRTGKVFACDWDNVTPDMY--ILGKALGG-GVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKL 304 (392)
T ss_dssp TTTTSSSSGGGGGTCCCSEE--EECGGGGT-TTSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTH
T ss_pred CCccccchhhhccCCCCCEE--EEchhhhC-ChhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 2 1 112223346776 45699887 32457999999988877765444334455676666666666554 345
Q ss_pred HHHHHHHHHHHHHHHHcC
Q 012321 410 VQQQNSTALRMAKILEAH 427 (466)
Q Consensus 410 ~e~~~~na~~La~~L~~~ 427 (466)
.++..++++++.+.|++.
T Consensus 305 ~~~~~~~~~~l~~~L~~~ 322 (392)
T 3ruy_A 305 TERSLQLGEKLVGQLKEI 322 (392)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 667788889999999876
No 90
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.88 E-value=1.2e-21 Score=199.76 Aligned_cols=170 Identities=10% Similarity=0.090 Sum_probs=139.4
Q ss_pred chhHHHHHHHHHhhhCCCc--EE-EeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC--
Q 012321 209 NPTTVVVEEKMSALEGAES--TV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~--~v-~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~-- 283 (466)
.+..+++++++++++|.+. .+ +++||++|+..++.+++++||+|+++++.|.+.. +...+...|+++..++..
T Consensus 43 ~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 120 (416)
T 3isl_A 43 TGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYL--LTEIAERYGANVHMLECEWG 120 (416)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHhcCCeeEEEecCCC
Confidence 5668899999999999743 34 5678889999999999999999999999998732 234455678888777643
Q ss_pred ---CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEecccccc
Q 012321 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (466)
Q Consensus 284 ---D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK~l 359 (466)
|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......++|+++.|++|++
T Consensus 121 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l 200 (416)
T 3isl_A 121 TVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCL 200 (416)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTT
T ss_pred CCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCcccc
Confidence 899999999832489999999999999999999999999999999999999875543 2334567999999999987
Q ss_pred ccccCceEEEEEeChHHHHHHHH
Q 012321 360 GGHNDVLAGSISGSGKLVTQIRN 382 (466)
Q Consensus 360 gG~gdv~gG~vvg~~eli~~l~~ 382 (466)
.|+. ..|+++.+++++++++.
T Consensus 201 ~g~~--g~g~~~~~~~~~~~~~~ 221 (416)
T 3isl_A 201 SVPS--GMAPITYNERVADVIAA 221 (416)
T ss_dssp CCCS--SEEEEEECHHHHHHHHT
T ss_pred CCCC--CeEEEEECHHHHHHhhc
Confidence 6654 26899999999888763
No 91
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.88 E-value=1.5e-20 Score=191.08 Aligned_cols=210 Identities=17% Similarity=0.108 Sum_probs=153.9
Q ss_pred HHHHHHhh----hC----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 215 VEEKMSAL----EG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 215 Lee~lA~l----~g----~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
|++.++++ +| .++.+++++|++|+.+++.+++++||+|+++.|.|++....+ ...|.++..++.
T Consensus 69 lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~ 144 (390)
T 1d2f_A 69 FLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAI----EGNQRTVMPVALEKQA 144 (390)
T ss_dssp HHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHH----HHTTCEEEEEECEECS
T ss_pred HHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHH----HHCCCEEEEeecccCC
Confidence 55555554 45 256677777779999999999999999999999999866443 345666665542
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----cchhccC--C
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLG--A 348 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~-----~~pl~~g--a 348 (466)
.|+++|++++++.++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... .....+. .
T Consensus 145 ~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 224 (390)
T 1d2f_A 145 DGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGD 224 (390)
T ss_dssp SSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSS
T ss_pred CccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhh
Confidence 58999999997645999999999999999987 89999999999999999999876432 1112222 2
Q ss_pred -cEEEeccccccccccCceEEEEEeC-hHHHHHHHHHHH-HhC-CCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHH
Q 012321 349 -DLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHH-VLG-GALNPNAAYLIIRGM----KTLHLRVQQQNSTALRM 420 (466)
Q Consensus 349 -Divv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~-~~G-~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~~L 420 (466)
|. +.|+||+++.+| .+.|+++++ +++++.++.... ... .+.++...+.+...+ +.++.+.++..++++.+
T Consensus 225 ~d~-~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 302 (390)
T 1d2f_A 225 WAL-LTSGSKSFNIPA-LTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYI 302 (390)
T ss_dssp EEE-EECSHHHHTCGG-GCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred Hhh-ccCccHhhcccC-hhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 77 999999998666 457888874 788888877665 333 244555444433333 34555666778888899
Q ss_pred HHHHHc-CCCc
Q 012321 421 AKILEA-HPKV 430 (466)
Q Consensus 421 a~~L~~-~p~V 430 (466)
.+.|++ +|.+
T Consensus 303 ~~~L~~~~~~~ 313 (390)
T 1d2f_A 303 ADKMNAAFPEL 313 (390)
T ss_dssp HHHHHHHCSSC
T ss_pred HHHHHhhCCCC
Confidence 999988 6654
No 92
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.88 E-value=2.1e-21 Score=197.69 Aligned_cols=170 Identities=14% Similarity=0.136 Sum_probs=138.5
Q ss_pred hhHHHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC---
Q 012321 210 PTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e--~-~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~--- 283 (466)
+..+++++++++++|.+ + .++++||++|+..++.+++++||+|+++++.|.+.. +...+...|+++..++..
T Consensus 46 ~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 123 (411)
T 3nnk_A 46 HYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHL--LCEIARRCRAEVHTIEVPWGE 123 (411)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHH--HHHHHHHcCCeEEEEecCCCC
Confidence 55789999999999873 3 345567889999999999999999999999997732 223455668887777543
Q ss_pred --CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEeccccccc
Q 012321 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIG 360 (466)
Q Consensus 284 --D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK~lg 360 (466)
|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......++|+++.|++|+++
T Consensus 124 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~ 203 (411)
T 3nnk_A 124 VFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLG 203 (411)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTC
T ss_pred CCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccC
Confidence 899999999753499999999999999999999999999999999999999865433 33345579999999999876
Q ss_pred cccCceEEEEEeChHHHHHHHHH
Q 012321 361 GHNDVLAGSISGSGKLVTQIRNL 383 (466)
Q Consensus 361 G~gdv~gG~vvg~~eli~~l~~~ 383 (466)
++. ..|+++.+++++++++..
T Consensus 204 ~~~--g~g~~~~~~~~~~~~~~~ 224 (411)
T 3nnk_A 204 GPS--GTSPITLSARMEEAIRRR 224 (411)
T ss_dssp CCS--SEEEEEECHHHHHHHHTT
T ss_pred CCC--ceEEEEECHHHHHHHhhc
Confidence 654 268999999998887754
No 93
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.88 E-value=3.2e-21 Score=191.47 Aligned_cols=211 Identities=15% Similarity=0.177 Sum_probs=159.4
Q ss_pred cCCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e-~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
+.+|+++....|++++++++|.+ +.+++++|+ +++.+++..+ +||+|+++.|+|.+... .++..|+++..++
T Consensus 45 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~----~~~~~g~~~~~v~ 118 (337)
T 3p1t_A 45 INRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRA----RIAVSGLRHFEIG 118 (337)
T ss_dssp TTSCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHH----HHTTSCCEEEEEC
T ss_pred hccCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHH----HHHHcCCEEEEec
Confidence 45567788999999999999974 355555555 8888888776 99999999999998553 3456788888776
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---hhccCCcEEEe
Q 012321 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---ALSLGADLVLH 353 (466)
Q Consensus 282 ~-----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~---pl~~gaDivv~ 353 (466)
. .|+++|+++ . ++++|++++|+||||.+.|+++|.++|+++++ +|+|++|....... ....+.++++.
T Consensus 119 ~~~~~~~d~~~l~~~--~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~ 194 (337)
T 3p1t_A 119 LTDDLLLDPNDLAQV--S-RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFR 194 (337)
T ss_dssp BCTTSSBCHHHHTTC--C-TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEE
T ss_pred CCCCCCCCHHHHHhh--c-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEe
Confidence 3 378888876 2 38999999999999999999999999999996 66699987432211 11235679999
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHH---HHHHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAY---LIIRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~---l~lrgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
|+||+++.+| .+.|++++++++++.++.....++ .+..... .+++..+.+..+++++.++++.+.+.|+++
T Consensus 195 S~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 268 (337)
T 3p1t_A 195 SFSKSYGLAG-LRLGALFGPSELIAAMKRKQWFCN--VGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL 268 (337)
T ss_dssp ESSSTTCCTT-TCCEEEECCHHHHHHHHTTSCTTC--SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCchhccCcc-hheEEEEeCHHHHHHHHhhcCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999998666 357899999999998876544333 2333322 233334456677788888899999999886
No 94
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.88 E-value=1.8e-20 Score=191.22 Aligned_cols=212 Identities=18% Similarity=0.136 Sum_probs=162.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~ 285 (466)
..+...++++++++++|.++.+++++|+.++..++..+. .+||+|+++.+.|++....+ ...|+++..++..|+
T Consensus 89 ~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~d~ 164 (401)
T 2bwn_A 89 TTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGI----KRNAGPKRIFRHNDV 164 (401)
T ss_dssp CBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHH----HHSCCCEEEECTTCH
T ss_pred ChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHHHHHhcCCCCCEEEECchhhHHHHHHH----HHcCCeEEEEcCCCH
Confidence 356789999999999999899999999987777766654 58999999999999866443 346888888887789
Q ss_pred HHHHHhccC---CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-------chhc--cCCcEEEe
Q 012321 286 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALS--LGADLVLH 353 (466)
Q Consensus 286 e~Le~ai~~---~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~-------~pl~--~gaDivv~ 353 (466)
++|++.++. .++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+... .... .+.|+++.
T Consensus 165 ~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~ 244 (401)
T 2bwn_A 165 AHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNG 244 (401)
T ss_dssp HHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEE
T ss_pred HHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEe
Confidence 999988861 24899999999999999999999999999999999999998844321 0111 13589999
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH-----HHHHHHHHHHHHHHHHHHHc
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~--~~G~~ls~~~A~l~lrgL~tl-----~~R~e~~~~na~~La~~L~~ 426 (466)
|++|.++++| |++++++++++.++.... .+....++..+..+...++.+ ....++..++++.+.+.|++
T Consensus 245 s~sK~~~~~G----G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 320 (401)
T 2bwn_A 245 TLAKAYGVFG----GYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKA 320 (401)
T ss_dssp ESSSTTCSCC----EEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred echhhccCCC----CEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999764 899999998888775432 222223344443333333332 45667778888899998887
Q ss_pred C
Q 012321 427 H 427 (466)
Q Consensus 427 ~ 427 (466)
.
T Consensus 321 ~ 321 (401)
T 2bwn_A 321 L 321 (401)
T ss_dssp H
T ss_pred C
Confidence 5
No 95
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.87 E-value=1.3e-21 Score=197.07 Aligned_cols=216 Identities=13% Similarity=0.077 Sum_probs=159.7
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccC-------------CCEEEEcCCCccchHHHHHhhcccC
Q 012321 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPA-------------GGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all~p-------------GD~VLv~~~~y~~t~~~~~~~l~~~ 273 (466)
.+..+++++++++++|.+ +.+++++|++|+..++.++..+ ||+|+++.+.|++....+ ...
T Consensus 68 ~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~----~~~ 143 (397)
T 3f9t_A 68 KLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGR----EMM 143 (397)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHH----HHc
Confidence 455678899999999874 4577888889999999998776 999999999999866443 345
Q ss_pred CcEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc--------
Q 012321 274 GITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------- 340 (466)
Q Consensus 274 gi~v~~vd~~-----D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-------- 340 (466)
|+++..++.. |+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+..
T Consensus 144 g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~ 223 (397)
T 3f9t_A 144 DLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYK 223 (397)
T ss_dssp TCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGC
T ss_pred CceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccc
Confidence 7888887653 899999999872389999999999999999999999999999999999999874321
Q ss_pred -------cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHh---------CC--CchHHHHHHHHH-
Q 012321 341 -------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL---------GG--ALNPNAAYLIIR- 401 (466)
Q Consensus 341 -------~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~---------G~--~ls~~~A~l~lr- 401 (466)
..... ++|+++.|++|+++++.. +|++++.++.+++.++.....+ +. ..+....+.+++
T Consensus 224 ~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 301 (397)
T 3f9t_A 224 KKGVNYKFDFSL-GVDSITIDPHKMGHCPIP-SGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRY 301 (397)
T ss_dssp CTTCCCCCSGGG-TCSEEECCTTTTTCCCSS-CEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHH
T ss_pred cccccccccccc-cCCeEEEccccccCCCCC-ceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHH
Confidence 11122 789999999999976652 3444445555555443211111 11 123344444443
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHcCCCcE
Q 012321 402 -GMKTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 402 -gL~tl~~R~e~~~~na~~La~~L~~~p~V~ 431 (466)
....+..++++..++++++.+.|+++ ++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 331 (397)
T 3f9t_A 302 LGREGQRKIVNECMENTLYLYKKLKEN-NFK 331 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 34456677888889999999999987 443
No 96
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.87 E-value=1.2e-20 Score=194.20 Aligned_cols=212 Identities=14% Similarity=0.163 Sum_probs=168.3
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------
Q 012321 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~------ 282 (466)
+..+++++++++++|.++.+++++|++|+..++.++ +++||+|+++.+.|.+....+ ...|.++.+++.
T Consensus 42 ~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~ 117 (418)
T 2c81_A 42 SMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAV----LNVNALPVFVDVEADTYC 117 (418)
T ss_dssp CHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTTTCS
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHHH----HHcCCEEEEEecCCCCCC
Confidence 448999999999999989999999999999999999 899999999999999876443 356778777753
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc--cchhccCCcEEEecc--ccc
Q 012321 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKALSLGADLVLHSA--TKF 358 (466)
Q Consensus 283 ~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~--~~pl~~gaDivv~S~--sK~ 358 (466)
.|+++|+++++++ +++|++ +||+|.+.|+++|.++|+++|+++|+|++|+.+.. ..+...-.|+++.|+ +|+
T Consensus 118 ~d~~~l~~~i~~~-~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~ 193 (418)
T 2c81_A 118 IDPQLIKSAITDK-TKAIIP---VHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKV 193 (418)
T ss_dssp BCHHHHGGGCCTT-EEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred cCHHHHHHhhCCC-CeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcc
Confidence 2799999999874 999986 56899999999999999999999999999987642 122222247888888 999
Q ss_pred cccccCceEEEEEe-ChHHHHHHHHHHHHh--------------C------------CCchHHHHHHHHHhhHHHHHHHH
Q 012321 359 IGGHNDVLAGSISG-SGKLVTQIRNLHHVL--------------G------------GALNPNAAYLIIRGMKTLHLRVQ 411 (466)
Q Consensus 359 lgG~gdv~gG~vvg-~~eli~~l~~~~~~~--------------G------------~~ls~~~A~l~lrgL~tl~~R~e 411 (466)
+++ | .+|++++ +++++++++...... . ..+.++.+.+.+..++.++.+++
T Consensus 194 ~~~-g--~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~ 270 (418)
T 2c81_A 194 LTA-G--EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNA 270 (418)
T ss_dssp SCS-S--SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHHHHHH
T ss_pred cCC-C--CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 988 5 5799998 478888877644321 0 01345556666667777888888
Q ss_pred HHHHHHHHHHHHHHcCCCcEE
Q 012321 412 QQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~~ 432 (466)
+..++++++.+.|++.|+++.
T Consensus 271 ~~~~~~~~l~~~L~~~~g~~~ 291 (418)
T 2c81_A 271 IREKNAMFLNDALSKIDGIKV 291 (418)
T ss_dssp HHHHHHHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHHHHHhccCCCccc
Confidence 888999999999998877643
No 97
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.87 E-value=2.4e-20 Score=192.57 Aligned_cols=212 Identities=17% Similarity=0.188 Sum_probs=169.2
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~------ 282 (466)
.+...+|++++++++|.++++++++|++|+.+++.++. +||+|+++++.|.+.... +...|+++.+++.
T Consensus 51 ~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~----~~~~G~~~~~v~~~~~~~~ 125 (424)
T 2po3_A 51 GPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAG-LTGEVIMPSMTFAATPHA----LRWIGLTPVFADIDPDTGN 125 (424)
T ss_dssp CHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHT-CCSEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTTSS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC-CCCEEEECCCccHHHHHH----HHHcCCEEEEEecCCCcCC
Confidence 47889999999999999989999999999999998875 789999999999986643 3446788877753
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc--chhccCCcEEEeccc--cc
Q 012321 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSAT--KF 358 (466)
Q Consensus 283 ~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~--~pl~~gaDivv~S~s--K~ 358 (466)
.|+++|++++++ ++++|+++ ||+|.+.|+++|.++|+++|+++|+|++|+.+... .++....|+++.|++ |+
T Consensus 126 ~d~~~l~~~i~~-~~~~v~~~---~~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~ 201 (424)
T 2po3_A 126 LDPDQVAAAVTP-RTSAVVGV---HLWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKA 201 (424)
T ss_dssp BCHHHHGGGCCT-TEEEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred cCHHHHHHhhCc-CCcEEEEE---CCCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCC
Confidence 279999999987 49999984 48999999999999999999999999999854322 222223589999998 87
Q ss_pred cccccCceEEEEEeC-hHHHHHHHHHHHHhC------------CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 012321 359 IGGHNDVLAGSISGS-GKLVTQIRNLHHVLG------------GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 359 lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G------------~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~ 425 (466)
+++ + ++|+++++ ++++++++....... ..+++..+++++..++.++.+.++..++++.+.+.|+
T Consensus 202 l~~-~--~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 278 (424)
T 2po3_A 202 VNA-F--EGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLA 278 (424)
T ss_dssp SCC-S--SCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccC-C--CCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 776 3 57999998 788888876554211 1345677777777777788888888889999999998
Q ss_pred cCCCcEE
Q 012321 426 AHPKVKR 432 (466)
Q Consensus 426 ~~p~V~~ 432 (466)
+.|++..
T Consensus 279 ~~~g~~~ 285 (424)
T 2po3_A 279 DLPGVLV 285 (424)
T ss_dssp SCTTEEE
T ss_pred cCCCccc
Confidence 8877643
No 98
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.87 E-value=4e-21 Score=194.84 Aligned_cols=220 Identities=15% Similarity=0.148 Sum_probs=161.3
Q ss_pred cCCCCchhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e---~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
|+.+..+...++++++++++|.+ +.+++++|++|+..++.+++++||+|+++++.|.+.. +...++..|.++..+
T Consensus 46 ~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 123 (393)
T 2huf_A 46 LHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDR--SADMATRYGADVRVV 123 (393)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHH--HHHHHHHcCCeeEEE
Confidence 33334567899999999999974 2445577779999999999999999999999998742 223345568777777
Q ss_pred C-----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEec
Q 012321 281 D-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (466)
Q Consensus 281 d-----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S 354 (466)
+ ..|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|+++..+.. .....++.|+++.|
T Consensus 124 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s 203 (393)
T 2huf_A 124 KSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTG 203 (393)
T ss_dssp ECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECC
T ss_pred eCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEEC
Confidence 5 25899999999762389999999999999999999999999999999999999765432 12224578999999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHHH----H-H---------hC---------CCchHHHHHH---HHHhhH--HH
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH----H-V---------LG---------GALNPNAAYL---IIRGMK--TL 406 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~~----~-~---------~G---------~~ls~~~A~l---~lrgL~--tl 406 (466)
+||+++|+... |+++++++++++++... . . ++ ++.+...... +++.+. .+
T Consensus 204 ~sK~l~g~~G~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 281 (393)
T 2huf_A 204 SQKVLGAPPGI--TPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGL 281 (393)
T ss_dssp SSSTTCCCSSC--EEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CCcccccCCCe--EEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCH
Confidence 99987654322 88889999988876531 0 0 11 1223322221 233322 14
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 012321 407 HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 407 ~~R~e~~~~na~~La~~L~~~ 427 (466)
..+.++..++++++.+.|++.
T Consensus 282 ~~~~~~~~~~~~~l~~~L~~~ 302 (393)
T 2huf_A 282 PALIARHEDCAKRLYRGLQDA 302 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 556777888899999999875
No 99
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.87 E-value=6e-21 Score=196.01 Aligned_cols=209 Identities=15% Similarity=0.190 Sum_probs=157.6
Q ss_pred HHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC
Q 012321 212 TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 212 ~~~Lee~lA~l~g--------~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~ 283 (466)
...+++.++++++ .++.+++++|++|+.+++.+++++||+|+++.+.|.+....+ ...|.++..++..
T Consensus 81 ~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~ 156 (409)
T 2gb3_A 81 IWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFA----KIAGVKLIPVTRR 156 (409)
T ss_dssp CHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHH----HHHTCEEEEEECC
T ss_pred cHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHcCCEEEEeccC
Confidence 4567777776653 156777777789999999999999999999999999865433 3457777666543
Q ss_pred -----C-HHHHHHhccCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCc----cchhc--cCC
Q 012321 284 -----D-MEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN----QKALS--LGA 348 (466)
Q Consensus 284 -----D-~e~Le~ai~~~~tklV~lesPsNPtG~v~---dl~~I~ela~~~gillIvD~t~a~~~~----~~pl~--~ga 348 (466)
+ +++|++++++ ++++|++++|+||||.+. ++++|.++|+++|+++|+|++|+.... ...+. .+.
T Consensus 157 ~~~~~~~~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~ 235 (409)
T 2gb3_A 157 MEEGFAIPQNLESFINE-RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDK 235 (409)
T ss_dssp GGGTSCCCTTGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTT
T ss_pred CCCCCccHHHHHHhhCc-CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCC
Confidence 2 6888888877 499999999999999987 489999999999999999999876432 11122 357
Q ss_pred cEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~~~G~~ls~~~A~l~lrgL----~tl~~R~e~~~~na~~La~~ 423 (466)
|+++.|++|+++.+| .+.|++++++ ++++.++....... ..++...+.+...+ +.++...++..++++.+.+.
T Consensus 236 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 313 (409)
T 2gb3_A 236 VVVIDSVSKKFSACG-ARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKK 313 (409)
T ss_dssp EEEEEESTTTTTCGG-GCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecchhccCCcc-ceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998666 4579999988 89998887766554 45555444443333 33555566777888889999
Q ss_pred HHcC
Q 012321 424 LEAH 427 (466)
Q Consensus 424 L~~~ 427 (466)
|+++
T Consensus 314 L~~~ 317 (409)
T 2gb3_A 314 LEEH 317 (409)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9876
No 100
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.87 E-value=3.2e-21 Score=194.66 Aligned_cols=210 Identities=13% Similarity=0.083 Sum_probs=154.8
Q ss_pred hhHHHHHHHHHhhhCC----CcEEEeCCHHHHHHHHHHHhccC--CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC
Q 012321 210 PTTVVVEEKMSALEGA----ESTVIMASGMSASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~----e~~v~~~SG~aAi~~al~all~p--GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~ 283 (466)
+.++++.+.+++.+|. ++.+++++|++++.+++.+++++ ||+|+++.|+|.+.... +...|.++..++..
T Consensus 63 ~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 138 (376)
T 3ezs_A 63 SLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGA----AKFIKAKSLLMPLT 138 (376)
T ss_dssp HHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHH----HHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHH----HHHcCCEEEEcccC
Confidence 3444444445444463 56777788889999999999999 99999999999986543 34567777776543
Q ss_pred CHH----HHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chh--------
Q 012321 284 DME----GLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-------- 344 (466)
Q Consensus 284 D~e----~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl-------- 344 (466)
+.+ ++++++.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... ...
T Consensus 139 ~~~~~~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 217 (376)
T 3ezs_A 139 KENDFTPSLNEKELQ-EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGN 217 (376)
T ss_dssp GGGTSCCCCCHHHHH-HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTC
T ss_pred CCCCcchhHHhhhcc-CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccc
Confidence 211 56666665 3899999999999999987 667888899999999999998763321 111
Q ss_pred -ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHH
Q 012321 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRM 420 (466)
Q Consensus 345 -~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~L 420 (466)
..+.++++.|+||+++.+| .+.|++++++++++.++......+.+.++..++.+...+ +.+..+.+++.++.+.+
T Consensus 218 ~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 296 (376)
T 3ezs_A 218 EAFKNVLVIHSLSKRSSAPG-LRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLA 296 (376)
T ss_dssp TTCTTEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH
T ss_pred cccCcEEEEecchhccCCcc-ceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 3567899999999997666 457899999999999988776655566666555444333 34566667777888888
Q ss_pred HHHHH
Q 012321 421 AKILE 425 (466)
Q Consensus 421 a~~L~ 425 (466)
.+.|+
T Consensus 297 ~~~l~ 301 (376)
T 3ezs_A 297 RKIFK 301 (376)
T ss_dssp HHHST
T ss_pred HHHhc
Confidence 88886
No 101
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.87 E-value=6.3e-21 Score=193.61 Aligned_cols=210 Identities=19% Similarity=0.232 Sum_probs=170.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
..+...++++.+++++|.++++++++|++|+.+++.++ +++||+|+++.++|+++...+ ...|+++..++.
T Consensus 37 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~ 112 (393)
T 1mdo_A 37 TGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMI----VLLGANPVMVDVDRDT 112 (393)
T ss_dssp SSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHH----HHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHHH----HHCCCEEEEEeccCCc
Confidence 45889999999999999999999999999999999999 899999999999999866433 456888877752
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccC-CcEEEeccc--c
Q 012321 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG-ADLVLHSAT--K 357 (466)
Q Consensus 283 --~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~g-aDivv~S~s--K 357 (466)
.|+++|++++++ ++++|+++ ||+|.+.|+++|.++|+++|+++|+|++|+.+.......++ .|+++.|++ |
T Consensus 113 ~~~d~~~l~~~l~~-~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K 188 (393)
T 1mdo_A 113 LMVTPEHIEAAITP-QTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIK 188 (393)
T ss_dssp CCBCHHHHHHHCCT-TEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTS
T ss_pred CCCCHHHHHHhcCC-CceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCC
Confidence 479999999987 49999874 57999999999999999999999999999865432222345 899999999 9
Q ss_pred ccccccCceEEEEEeC-hHHHHHHHHHHHHh----------------------C--CCchHHHHHHHHHhhHHHHHHHHH
Q 012321 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHVL----------------------G--GALNPNAAYLIIRGMKTLHLRVQQ 412 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~----------------------G--~~ls~~~A~l~lrgL~tl~~R~e~ 412 (466)
++++. ++|+++++ ++++++++...... | ..++++.+.+++..++.++.+.++
T Consensus 189 ~l~~~---~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~ 265 (393)
T 1mdo_A 189 NITCA---EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNAR 265 (393)
T ss_dssp SSCSS---SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHH
T ss_pred ccccc---cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 98763 47898886 78888877643210 1 124667777666777778888888
Q ss_pred HHHHHHHHHHHHHcCC
Q 012321 413 QNSTALRMAKILEAHP 428 (466)
Q Consensus 413 ~~~na~~La~~L~~~p 428 (466)
..++++.+.+.|++.+
T Consensus 266 ~~~~~~~l~~~L~~~~ 281 (393)
T 1mdo_A 266 RAAIAAQYHQAMADLP 281 (393)
T ss_dssp HHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHhcCC
Confidence 8889999999999876
No 102
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.87 E-value=5.7e-21 Score=193.28 Aligned_cols=213 Identities=15% Similarity=0.134 Sum_probs=158.6
Q ss_pred CchhHHHHHHHHHhh------hCC-CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 208 GNPTTVVVEEKMSAL------EGA-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l------~g~-e~~v~~~SG-~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
+++...++++.++++ .+. ++.+++++| ++++.+++.+++++||+|+++++.|++.... +...|.++..
T Consensus 67 ~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~----~~~~g~~~~~ 142 (369)
T 3cq5_A 67 PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPIL----AKGTHTEFIA 142 (369)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTCEEEEEESSCTHHHHH----HHHTTCEEEE
T ss_pred CCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCCEEEEcCCChHHHHHH----HHHcCCEEEE
Confidence 333335788888887 343 344555555 5999999999999999999999999986543 3445777666
Q ss_pred eC-----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchh----ccC-C
Q 012321 280 ID-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKAL----SLG-A 348 (466)
Q Consensus 280 vd-----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl----~~g-a 348 (466)
++ ..|++++++++++.++++|++++|+||||.+.|++++.++++.+++++|+|++|+.+.. .... ..+ .
T Consensus 143 v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 222 (369)
T 3cq5_A 143 VSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTK 222 (369)
T ss_dssp EECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTT
T ss_pred ecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCC
Confidence 64 34799999998762389999999999999999999999999999999999999875432 1112 234 6
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L~ 425 (466)
++++.|+||+++.+| .+.|+++++++++++++.....++ .++..++.+...+ +.+..+.++..++++.+.+.|+
T Consensus 223 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 299 (369)
T 3cq5_A 223 LVVSRTMSKAFDFAG-GRLGYFVANPAFIDAVMLVRLPYH--LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLE 299 (369)
T ss_dssp EEEEEESSSTTSCGG-GCCEEEEECTHHHHHHHTTSCTTC--SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEEechHhcCCcc-cceEEEEeCHHHHHHHHHcCCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999998666 457999999999888876554443 4555444444333 3466667778888999999998
Q ss_pred cC
Q 012321 426 AH 427 (466)
Q Consensus 426 ~~ 427 (466)
+.
T Consensus 300 ~~ 301 (369)
T 3cq5_A 300 EL 301 (369)
T ss_dssp HH
T ss_pred hC
Confidence 73
No 103
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.87 E-value=8e-21 Score=191.12 Aligned_cols=212 Identities=19% Similarity=0.226 Sum_probs=168.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al---l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
.+...++++.|++++|.++++++++|++|+.+++.++ +++||+|+++.+.|+++...+. ..|+++.+++.
T Consensus 31 ~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~~~~~~~ 106 (375)
T 2fnu_A 31 GKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLL----ESGYTPVFAGIKND 106 (375)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHHH----HTTCEEEECCBCTT
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHHH----HCCCEEEEeccCCC
Confidence 6788999999999999998889999999999999999 8999999999999998765433 46888887764
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccC--CcEEEeccc--
Q 012321 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT-- 356 (466)
Q Consensus 283 --~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~g--aDivv~S~s-- 356 (466)
.|+++|+++++++ +++|++++| +|.+.|+++|.++|+++|+++|+|++++.+........+ .|+++.|++
T Consensus 107 ~~~d~~~l~~~i~~~-~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~ 182 (375)
T 2fnu_A 107 GNIDELALEKLINER-TKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAI 182 (375)
T ss_dssp SSBCGGGSGGGCCTT-EEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred CCCCHHHHHhhcCcC-ceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCC
Confidence 3789999999874 999888766 899999999999999999999999998765432211122 378888888
Q ss_pred cccccccCceEEEEEeC-hHHHHHHHHHHHHh--------------C--CCchHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 012321 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--------------G--GALNPNAAYLIIRGMKTLHLRVQQQNSTALR 419 (466)
Q Consensus 357 K~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~--------------G--~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~ 419 (466)
|++++ | +||+++.+ ++++++++...... + ..+.++.+.+.+..++.++.++++..+++++
T Consensus 183 K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 259 (375)
T 2fnu_A 183 KPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALT 259 (375)
T ss_dssp SSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99976 5 46777654 77888877654211 1 1456676666666677788888999999999
Q ss_pred HHHHHHcCCCcE
Q 012321 420 MAKILEAHPKVK 431 (466)
Q Consensus 420 La~~L~~~p~V~ 431 (466)
+.+.|+++|++.
T Consensus 260 l~~~L~~~~~~~ 271 (375)
T 2fnu_A 260 YDRIFKDNPYFT 271 (375)
T ss_dssp HHHHHTTCSSEE
T ss_pred HHHHhhcCCCcc
Confidence 999999988764
No 104
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.87 E-value=1.2e-20 Score=192.22 Aligned_cols=213 Identities=15% Similarity=0.186 Sum_probs=167.6
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC--
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~-- 283 (466)
..++...+|++.+++++|.++++++++|++|+..++.++ +++||+|+++.+.|.++...+ ...|+++.+++..
T Consensus 53 ~~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~ 128 (391)
T 3dr4_A 53 SVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSV----TYCGATPVLVDNDPR 128 (391)
T ss_dssp SCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTT
T ss_pred CCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHH----HHCCCEEEEEecCcc
Confidence 346889999999999999999999999999999999999 899999999999999876443 3468888777643
Q ss_pred ----CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccC--CcEEEeccc-
Q 012321 284 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT- 356 (466)
Q Consensus 284 ----D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~g--aDivv~S~s- 356 (466)
|+++|+++++++ +++|+ |+||||.+.|+++|.++|+++|+++|+|++|+.+........+ .|+++.|++
T Consensus 129 ~~~~d~~~l~~~~~~~-~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~ 204 (391)
T 3dr4_A 129 TFNLDAAKLEALITPR-TKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFG 204 (391)
T ss_dssp TCSBCGGGSGGGCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBT
T ss_pred ccCcCHHHHHHhcCCC-ceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCC
Confidence 789999999874 89888 5789999999999999999999999999999876543322222 488888865
Q ss_pred -cccccccCceEEEEEeC-hHHHHHHHHHHHHh--------------CCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 012321 357 -KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--------------GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 357 -K~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~--------------G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~~L 420 (466)
|++++ + .+|+++.+ ++++++++...... ...+.++.+.+.+..++.++...++..++++++
T Consensus 205 ~K~l~~-g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l 281 (391)
T 3dr4_A 205 NAIITT-G--EGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWY 281 (391)
T ss_dssp TSSSCC-B--SCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcCCc-C--CeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 3 36777765 55777776554211 123456666666666677777788888899999
Q ss_pred HHHHHcCCCcE
Q 012321 421 AKILEAHPKVK 431 (466)
Q Consensus 421 a~~L~~~p~V~ 431 (466)
.+.|++. ++.
T Consensus 282 ~~~L~~~-g~~ 291 (391)
T 3dr4_A 282 EQKLARL-GNR 291 (391)
T ss_dssp HHHHGGG-TTS
T ss_pred HHHhhcC-Ccc
Confidence 9999887 443
No 105
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.87 E-value=1.2e-20 Score=194.91 Aligned_cols=210 Identities=10% Similarity=0.045 Sum_probs=159.7
Q ss_pred HHHHHHHHHhhh-----CC--Cc---EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhccc-CCcEEEEe
Q 012321 212 TVVVEEKMSALE-----GA--ES---TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK-MGITATVI 280 (466)
Q Consensus 212 ~~~Lee~lA~l~-----g~--e~---~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~-~gi~v~~v 280 (466)
...|++.+++++ +. ++ .+++++|++|+.+++.+++++||+|+++.|.|++... .+.. .|.++..+
T Consensus 90 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~g~~~~~~ 165 (430)
T 2x5f_A 90 IEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKL----VFNTRNGANLQTY 165 (430)
T ss_dssp CHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH----HHTTTTCCEEEEE
T ss_pred CHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHH----HHHHhcCCeEEEE
Confidence 678888888887 54 45 5566666799999999999999999999999998653 3444 67777766
Q ss_pred CC------CCHHHHHHhccCC--CceEEEEeCCCCCCccccc---HHHHHHHHHh-----cCCEEEEeCCCCCCCcc---
Q 012321 281 DP------ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHK-----KGAIVCIDGTFATPLNQ--- 341 (466)
Q Consensus 281 d~------~D~e~Le~ai~~~--~tklV~lesPsNPtG~v~d---l~~I~ela~~-----~gillIvD~t~a~~~~~--- 341 (466)
+. .|+++|++++++. ++++|++++|+||||.+.+ +++|.++|++ +|+++|+|++|......
T Consensus 166 ~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~ 245 (430)
T 2x5f_A 166 PIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVY 245 (430)
T ss_dssp CCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSC
T ss_pred eccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCccc
Confidence 52 4789999988751 4899999999999999998 8899999999 99999999998754221
Q ss_pred -ch----h-c-cCC---cEEEeccccccccccCceEEEEEe---ChHHHHHHHHHHHH----hCCCchHHHHHHHHHhhH
Q 012321 342 -KA----L-S-LGA---DLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHV----LGGALNPNAAYLIIRGMK 404 (466)
Q Consensus 342 -~p----l-~-~ga---Divv~S~sK~lgG~gdv~gG~vvg---~~eli~~l~~~~~~----~G~~ls~~~A~l~lrgL~ 404 (466)
.+ + . .+. ++++.|+||+++.+|. +.|++++ ++++++.++..... ...+.++..++.+...++
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (430)
T 2x5f_A 246 TQSLFTALTNLHSNAILPIRLDGATKEFFAWGF-RVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK 324 (430)
T ss_dssp CSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGG-CCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred chHHHHHHhhccCCcceEEEEEecccCCCCCCC-CeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence 11 1 1 345 6889999999987763 5688888 99999988876654 344456666555555554
Q ss_pred ----HHHH---HHHHHHHHHHHHHHHHHc
Q 012321 405 ----TLHL---RVQQQNSTALRMAKILEA 426 (466)
Q Consensus 405 ----tl~~---R~e~~~~na~~La~~L~~ 426 (466)
.++. +.+++.++++.+.+.|++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 353 (430)
T 2x5f_A 325 NNKQFDKEIEQNIQTLKERYEVTKEVVYA 353 (430)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333 666777888899999983
No 106
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.87 E-value=6.4e-21 Score=192.36 Aligned_cols=219 Identities=12% Similarity=0.082 Sum_probs=160.8
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHH---hc---cCC-CEEEEcCCCccchHHHHHhhccc----C
Q 012321 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLA---LV---PAG-GHIVTTTDCYRKTRIFIETVLPK----M 273 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~aAi~~al~a---ll---~pG-D~VLv~~~~y~~t~~~~~~~l~~----~ 273 (466)
+|.++...+|+++|++++|. ++.+++++|++|+.+++.. +. ++| |+|++.++.|++........... .
T Consensus 66 ~y~~~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~ 145 (375)
T 2eh6_A 66 LYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHK 145 (375)
T ss_dssp TBCCHHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTT
T ss_pred ccCCHHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccC
Confidence 34567788999999999998 7788888888999988865 34 678 99999999998754333222111 1
Q ss_pred Cc-----EEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC-Ccc--
Q 012321 274 GI-----TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LNQ-- 341 (466)
Q Consensus 274 gi-----~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~-~~~-- 341 (466)
+. .+..++..|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.. ...
T Consensus 146 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 224 (375)
T 2eh6_A 146 GFEPLVPGFSYAKLNDIDSVYKLLDE-ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF 224 (375)
T ss_dssp TTCSCCSSEEEECTTCHHHHHTTCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred CCCCCCCCceeCCCchHHHHHHHhcC-CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc
Confidence 22 2556666799999999986 4999999999999999988 999999999999999999998832 111
Q ss_pred -chhccC--CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 012321 342 -KALSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTAL 418 (466)
Q Consensus 342 -~pl~~g--aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~~R~e~~~~na~ 418 (466)
.....| .|++ |+||++++ + .+.|+++++++++++++..........++..+..+...++.+....++..++++
T Consensus 225 ~~~~~~~~~~d~~--s~SK~~~~-g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 300 (375)
T 2eh6_A 225 YAYQHFNLKPDVI--ALAKGLGG-G-VPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGN 300 (375)
T ss_dssp SGGGGGTCCCSEE--EECGGGGT-T-SCCEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCCEE--EEcccccC-C-CCeEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112335 7877 56699996 3 356888888888776654211122234566666666666666556677788899
Q ss_pred HHHHHHHcCCC
Q 012321 419 RMAKILEAHPK 429 (466)
Q Consensus 419 ~La~~L~~~p~ 429 (466)
.+.+.|++.+.
T Consensus 301 ~l~~~L~~~~~ 311 (375)
T 2eh6_A 301 YFKEKLKELGK 311 (375)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHHhc
Confidence 99999988653
No 107
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.87 E-value=8.2e-21 Score=192.70 Aligned_cols=220 Identities=17% Similarity=0.176 Sum_probs=160.1
Q ss_pred cCCCCchhHHHHHHHHHhhhCCC-c--EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 204 YGRYGNPTTVVVEEKMSALEGAE-S--TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~e-~--~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
|+.+..+...++++++++++|.+ + .+++++|++|+..++.+++++||+|+++++.|.+.. ....++..|+++..+
T Consensus 45 ~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 122 (396)
T 2ch1_A 45 FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAER--AVEMSERYGADVRTI 122 (396)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred CChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHH--HHHHHHHcCCceEEe
Confidence 44333456889999999999974 3 445566779999999999999999999999999853 112345568887777
Q ss_pred C-----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEec
Q 012321 281 D-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (466)
Q Consensus 281 d-----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S 354 (466)
+ ..|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. .....+++|+++.|
T Consensus 123 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s 202 (396)
T 2ch1_A 123 EGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTG 202 (396)
T ss_dssp ECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECC
T ss_pred cCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEc
Confidence 5 35899999999762389999999999999999999999999999999999999874322 12224568999999
Q ss_pred cccccccccCceEEEEEeChHHHHHHHHH--------------HHHhC---------CCchHHHHHH---HHHhh--HHH
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNL--------------HHVLG---------GALNPNAAYL---IIRGM--KTL 406 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~~~--------------~~~~G---------~~ls~~~A~l---~lrgL--~tl 406 (466)
++|+++++.. .|+++.++++++.++.. ...++ .+.+...... +++.+ +.+
T Consensus 203 ~~K~~~~~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 280 (396)
T 2ch1_A 203 AQKVLGAPPG--ITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGL 280 (396)
T ss_dssp CC-CCCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CCccccCCCC--eEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhH
Confidence 9998887653 38999999888776531 01111 1223322222 23332 224
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 012321 407 HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 407 ~~R~e~~~~na~~La~~L~~~ 427 (466)
+.+.++..++++.+.+.|+++
T Consensus 281 ~~~~~~~~~~~~~l~~~L~~~ 301 (396)
T 2ch1_A 281 ENQIKRRIECAQILYEGLGKM 301 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHC
Confidence 556777888888999988865
No 108
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.86 E-value=4.8e-21 Score=195.52 Aligned_cols=216 Identities=13% Similarity=0.140 Sum_probs=159.2
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----C
Q 012321 210 PTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 283 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----~ 283 (466)
+....|++.+++++|. ++.+++++|++|+.+++.+++++||+|++..|.|++....+ ...|.++..++. .
T Consensus 74 ~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~ 149 (397)
T 2zyj_A 74 EGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAF----RLQGPRFLTVPAGEEGP 149 (397)
T ss_dssp TCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HTTCCEEEEEEEETTEE
T ss_pred CCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHH----HHcCCEEEecCcCCCCC
Confidence 3467899999999985 34555555569999999999999999999999999866443 345766665542 4
Q ss_pred CHHHHHHhccCCCceEEE-EeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCc-----cchhcc------CC
Q 012321 284 DMEGLEAALNNNNVSLFF-TESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL------GA 348 (466)
Q Consensus 284 D~e~Le~ai~~~~tklV~-lesPsNPtG~v~dl---~~I~ela~~~gillIvD~t~a~~~~-----~~pl~~------ga 348 (466)
|+++|++++++.++++|+ +++|+||||.+.+. ++|.++|+++|+++|+|++|..... .....+ +.
T Consensus 150 d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (397)
T 2zyj_A 150 DLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPG 229 (397)
T ss_dssp CHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCC
T ss_pred CHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCe
Confidence 899999999753488884 79999999999875 4899999999999999999876432 111222 34
Q ss_pred cEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL-----~tl~~R~e~~~~na~~La~~ 423 (466)
++++.|+||+++ +| .+.|++++++++++.++..........++..++.+...+ +.+..+.+++.++++.+.+.
T Consensus 230 ~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (397)
T 2zyj_A 230 VIYLGSFSKVLS-PG-LRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHA 307 (397)
T ss_dssp EEEEEESTTTTC-GG-GCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccccc-cc-ceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999 55 467999999999998887655433333555444444433 33555566677888889999
Q ss_pred HHc-CC-CcE
Q 012321 424 LEA-HP-KVK 431 (466)
Q Consensus 424 L~~-~p-~V~ 431 (466)
|++ .| .+.
T Consensus 308 L~~~~~~g~~ 317 (397)
T 2zyj_A 308 LDREVPKEVR 317 (397)
T ss_dssp HHHHSCTTSE
T ss_pred HHHHCCCCeE
Confidence 987 46 354
No 109
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.86 E-value=8.7e-21 Score=195.71 Aligned_cols=217 Identities=14% Similarity=0.182 Sum_probs=156.7
Q ss_pred CCCCchh-HHHHHHHHHhhhC--------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccC
Q 012321 205 GRYGNPT-TVVVEEKMSALEG--------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 205 ~R~~~p~-~~~Lee~lA~l~g--------~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~ 273 (466)
.+|+++. ..+|++.++++++ . ++.+++++|++++.+++.+++++||+|++++|+|++.... .....
T Consensus 77 ~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~---~~~~~ 153 (428)
T 1iay_A 77 ANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRD---LRWRT 153 (428)
T ss_dssp HHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHH---TTTTT
T ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHH---HHHhc
Confidence 4455554 6788888888775 2 3444444445999999999999999999999999985431 23356
Q ss_pred CcEEEEeCC-------CCHHHHHHhccC-----CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCC
Q 012321 274 GITATVIDP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 274 gi~v~~vd~-------~D~e~Le~ai~~-----~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~ 338 (466)
|+++..++. .|+++|++++++ .++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...
T Consensus 154 g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 233 (428)
T 1iay_A 154 GVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAAT 233 (428)
T ss_dssp CCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGG
T ss_pred CCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEecccccc
Confidence 888777753 378999988863 24899999999999999999 899999999999999999998753
Q ss_pred Ccc-----c--hhccC-------Cc--EEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 012321 339 LNQ-----K--ALSLG-------AD--LVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIR 401 (466)
Q Consensus 339 ~~~-----~--pl~~g-------aD--ivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~~A~l~lr 401 (466)
... . .+..+ .| +++.|+||+++.+| .+.|++++ ++++++.++.....++ .++..+..+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G-lr~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~ 310 (428)
T 1iay_A 234 VFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG-FRVGIIYSFNDDVVNCARKMSSFGL--VSTQTQYFLAA 310 (428)
T ss_dssp CCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG-GCEEEEEESCHHHHHHHHHHHTTSC--CCHHHHHHHHH
T ss_pred ccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC-ceEEEEEeCCHHHHHHHHHHHhccc--CCHHHHHHHHH
Confidence 211 1 11112 57 89999999998766 45688887 6888888876554332 33443333333
Q ss_pred hhH-------HHHHHHHHHHHHHHHHHHHHHcC
Q 012321 402 GMK-------TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 402 gL~-------tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.++ .+....+++.++++.+.+.|+++
T Consensus 311 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (428)
T 1iay_A 311 MLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV 343 (428)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 332 23445566778888899999876
No 110
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.86 E-value=6.4e-21 Score=192.44 Aligned_cols=215 Identities=14% Similarity=0.160 Sum_probs=160.6
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC----
Q 012321 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID---- 281 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e---~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd---- 281 (466)
.+...++++++++++|.+ ..+++++|++|+..++.+++++||+|+++.+.|.+.. +...+...|.++..++
T Consensus 55 ~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~ 132 (393)
T 3kgw_A 55 LQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMR--AAEIADRIGARVHQMIKKPG 132 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCC
Confidence 466789999999999874 2456677789999999999999999999988875432 2234455677777664
Q ss_pred -CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccchhccCCcEEEecccccc
Q 012321 282 -PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFI 359 (466)
Q Consensus 282 -~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-~~~pl~~gaDivv~S~sK~l 359 (466)
..|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. .......++|+++.|+||++
T Consensus 133 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~ 212 (393)
T 3kgw_A 133 EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVL 212 (393)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTT
T ss_pred CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccc
Confidence 2589999999986349999999999999999999999999999999999999987442 23333457899999999988
Q ss_pred ccccCceEEEEEeChHHHHHHHHHHH--------------Hh---------CCCchHHHHHHHHHhhH---H--HHHHHH
Q 012321 360 GGHNDVLAGSISGSGKLVTQIRNLHH--------------VL---------GGALNPNAAYLIIRGMK---T--LHLRVQ 411 (466)
Q Consensus 360 gG~gdv~gG~vvg~~eli~~l~~~~~--------------~~---------G~~ls~~~A~l~lrgL~---t--l~~R~e 411 (466)
+|+.. .|+++++++++++++.... .+ ..+.+....+.+...++ . ++.+.+
T Consensus 213 ~~~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 290 (393)
T 3kgw_A 213 NAPPG--ISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWR 290 (393)
T ss_dssp CCCSS--CEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred cCCCc--eeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 65542 5899999999888764221 11 12233333222222222 2 466677
Q ss_pred HHHHHHHHHHHHHHcC
Q 012321 412 QQNSTALRMAKILEAH 427 (466)
Q Consensus 412 ~~~~na~~La~~L~~~ 427 (466)
+..++++.+.+.|+++
T Consensus 291 ~~~~~~~~l~~~L~~~ 306 (393)
T 3kgw_A 291 RHREATAHLHKHLQEM 306 (393)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 8888999999999886
No 111
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.86 E-value=3.2e-20 Score=194.21 Aligned_cols=215 Identities=16% Similarity=0.133 Sum_probs=157.5
Q ss_pred HHHHHHHHHhhh----CC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--
Q 012321 212 TVVVEEKMSALE----GA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 212 ~~~Lee~lA~l~----g~---e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-- 282 (466)
...|++++++++ |. ++.+++++|++|+..++.+++++||+|+++.|.|.+....+ ...|.++..++.
T Consensus 120 ~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~ 195 (448)
T 3aow_A 120 FTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF----NFYEPQYIQIPLDD 195 (448)
T ss_dssp CHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HTTCCEEEEEEEET
T ss_pred cHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHH----HHcCCEEEEeccCC
Confidence 456777777766 75 45556666679999999999999999999999999866443 345776666543
Q ss_pred --CCHHHHHHhcc----C-CCceEEE-EeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----chhc-
Q 012321 283 --ADMEGLEAALN----N-NNVSLFF-TESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS- 345 (466)
Q Consensus 283 --~D~e~Le~ai~----~-~~tklV~-lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~pl~- 345 (466)
.|+++|+++++ + .++++|+ +++|+||||.+++ +++|.++|+++|+++|+|++|...... ....
T Consensus 196 ~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~ 275 (448)
T 3aow_A 196 EGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKAL 275 (448)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGG
T ss_pred CCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhc
Confidence 48999999987 5 2489985 6899999999986 568999999999999999998764321 1112
Q ss_pred --cCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH------HHHHHHHHHHHHH
Q 012321 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTA 417 (466)
Q Consensus 346 --~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~------tl~~R~e~~~~na 417 (466)
.+.++++.|+||+++ +| .+.|++++++++++++.........+.+++.++.+...|+ .+....+++.+++
T Consensus 276 ~~~~~vi~~~S~SK~~~-~G-lriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 353 (448)
T 3aow_A 276 DNEGRVIYLGTFSKILA-PG-FRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRR 353 (448)
T ss_dssp CTTSCEEEEEESTTTTC-GG-GCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEccchhhcc-cc-ccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 246799999999998 55 4689999999999998876654433335554444433333 3445556667888
Q ss_pred HHHHHHHHc-CC-CcEE
Q 012321 418 LRMAKILEA-HP-KVKR 432 (466)
Q Consensus 418 ~~La~~L~~-~p-~V~~ 432 (466)
+.+.+.|++ .| .+..
T Consensus 354 ~~l~~~L~~~~~~g~~~ 370 (448)
T 3aow_A 354 DAMLEALEEFMPEGVKW 370 (448)
T ss_dssp HHHHHHHHHHCCTTCEE
T ss_pred HHHHHHHHHhCCCCeEE
Confidence 889999987 46 4543
No 112
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.86 E-value=2.8e-20 Score=190.78 Aligned_cols=215 Identities=11% Similarity=0.100 Sum_probs=155.0
Q ss_pred hHHHHHHHHHhhhC--------------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE
Q 012321 211 TTVVVEEKMSALEG--------------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 211 ~~~~Lee~lA~l~g--------------~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~ 276 (466)
....|++.++++++ .++.+++++|++|+.+++.+++++||+|+++.|.|++.... +...|++
T Consensus 76 ~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~----~~~~g~~ 151 (416)
T 1bw0_A 76 GSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETV----CKAYGIG 151 (416)
T ss_dssp CCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHTTCE
T ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHH----HHHcCcE
Confidence 45677778877776 35666666677999999999999999999999999986543 3445766
Q ss_pred EEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----
Q 012321 277 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (466)
Q Consensus 277 v~~vd~-------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----- 341 (466)
+..++. .|+++|+++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|......
T Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~ 230 (416)
T 1bw0_A 152 MHFYNCRPENDWEADLDEIRRLKDDK-TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPN 230 (416)
T ss_dssp EEEEEEEGGGTTEECHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTT
T ss_pred EEEeecCcccCCCCCHHHHHHHhccC-CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Confidence 665531 4799999999874 899999999999999998 899999999999999999998763211
Q ss_pred ---chh-cc---CCcEEEeccccccccccCceEEEEEeCh--HHHHHHH----HHHHHhCCCchHHHHHHHHHhh-----
Q 012321 342 ---KAL-SL---GADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIR----NLHHVLGGALNPNAAYLIIRGM----- 403 (466)
Q Consensus 342 ---~pl-~~---gaDivv~S~sK~lgG~gdv~gG~vvg~~--eli~~l~----~~~~~~G~~ls~~~A~l~lrgL----- 403 (466)
.++ .+ +.++++.|+||+++++| .+.|++++++ ++++.+. ..... ..+.++..++.+...+
T Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lr~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~ 308 (416)
T 1bw0_A 231 ATFTSVADFETTVPRVILGGTAKNLVVPG-WRLGWLLYVDPHGNGPSFLEGLKRVGML-VCGPCTVVQAALGEALLNTPQ 308 (416)
T ss_dssp CCCCCTTSSCCSCCEEEEEESTTTTSCGG-GCCEEEEEECTTCSCHHHHHHHHHHHHH-HTCSCHHHHHHHHHHHHSSCH
T ss_pred CCccCHHHccCCCcEEEEecchhhCCCCC-ceEEEEEeeCchhhHHHHHHHHHHHhcc-ccCCCcHHHHHHHHHHhcccH
Confidence 111 11 23588999999998776 3467887654 3444333 32211 1233444444333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcEE
Q 012321 404 KTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 404 ~tl~~R~e~~~~na~~La~~L~~~p~V~~ 432 (466)
+.+..+.++..++++.+.+.|+++|++..
T Consensus 309 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 337 (416)
T 1bw0_A 309 EHLDQIVAKIEESAMYLYNHIGECIGLAP 337 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 34566777888899999999998877653
No 113
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.86 E-value=1.1e-20 Score=188.32 Aligned_cols=212 Identities=10% Similarity=0.048 Sum_probs=154.7
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
+...++++++++++|.+ +.+++++|++|+.+++.+++++||+|+++++.|++.. +...+...|.++..++.
T Consensus 34 ~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 111 (352)
T 1iug_A 34 EVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSER--FYEIALEAGLVVERLDYPYGDT 111 (352)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCC
Confidence 45789999999999975 5566678889999999999999999999999999865 22334556888777653
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCc-cchhccCCcEEEecccccc
Q 012321 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (466)
Q Consensus 283 ~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~--gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK~l 359 (466)
.|+++|++ + ++++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+.. ......+.|+++.|+||++
T Consensus 112 ~d~~~l~~---~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 187 (352)
T 1iug_A 112 PRPEDVAK---E-GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGL 187 (352)
T ss_dssp CCTTTSCC---S-SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTT
T ss_pred CCHHHHhc---c-CCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccc
Confidence 35666655 3 489999999999999999999999999999 999999999874432 1222357899999999977
Q ss_pred ccccCceEEEEEeChHHHHH---------HHHHH-----HHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHH
Q 012321 360 GGHNDVLAGSISGSGKLVTQ---------IRNLH-----HVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMA 421 (466)
Q Consensus 360 gG~gdv~gG~vvg~~eli~~---------l~~~~-----~~~G~~ls~~~A~l~lrgL~----tl~~R~e~~~~na~~La 421 (466)
.++.+ .|+++.+++++++ ++... .....+.+......+...++ .++.+.++..++++.+.
T Consensus 188 ~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~ 265 (352)
T 1iug_A 188 MCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLY 265 (352)
T ss_dssp CCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHH
T ss_pred cCCCc--eeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76642 4888888887755 33111 11122333333222222222 25566777888999999
Q ss_pred HHHHcCCCc
Q 012321 422 KILEAHPKV 430 (466)
Q Consensus 422 ~~L~~~p~V 430 (466)
+.|++. ++
T Consensus 266 ~~L~~~-g~ 273 (352)
T 1iug_A 266 GVGEEG-GL 273 (352)
T ss_dssp HHHHHT-TC
T ss_pred HHHHHC-CC
Confidence 999886 44
No 114
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.86 E-value=2.9e-20 Score=189.32 Aligned_cols=211 Identities=15% Similarity=0.189 Sum_probs=151.8
Q ss_pred hhHHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--
Q 012321 210 PTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g----~e~~v~~~SG~aAi~~al~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-- 282 (466)
..++++.+.+.+.+| .++.+++++|++|+..++.+++++| |+|+++.|.|.+....+ ...|+++..++.
T Consensus 80 ~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~----~~~g~~~~~v~~~~ 155 (398)
T 3ele_A 80 ETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFV----NAAGARLVEVPADT 155 (398)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHH----HHTTCEEEEECCCT
T ss_pred HHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHH----HHcCCEEEEEecCC
Confidence 445555555555555 2567777777899999999999999 99999999999865433 456788777753
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHh------cCCEEEEeCCCCCCCcc------ch
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK------KGAIVCIDGTFATPLNQ------KA 343 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~------~gillIvD~t~a~~~~~------~p 343 (466)
.|+++|+++++++ +++|++++|+||||.+.+ +++|+++|++ +|+++|+|++|...... ..
T Consensus 156 ~~~~~d~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 234 (398)
T 3ele_A 156 EHFQIDFDALEERINAH-TRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT 234 (398)
T ss_dssp TTSSCCHHHHHHTCCTT-EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG
T ss_pred cCCcCCHHHHHHHhCcC-CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChH
Confidence 3899999999874 999999999999999998 6777789998 99999999998753321 11
Q ss_pred hccCCcEEEeccccccccccCceEEEEEeChHH------HHHHHHHHHHhC-CCchHHHHHHHHHhhHHHHHHHHHHHHH
Q 012321 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKL------VTQIRNLHHVLG-GALNPNAAYLIIRGMKTLHLRVQQQNST 416 (466)
Q Consensus 344 l~~gaDivv~S~sK~lgG~gdv~gG~vvg~~el------i~~l~~~~~~~G-~~ls~~~A~l~lrgL~tl~~R~e~~~~n 416 (466)
...+.++++.|+||+++.+| .+.|++++++++ .+.+.......+ ...+...++.+...++... ..+++.++
T Consensus 235 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~ 312 (398)
T 3ele_A 235 KYYDNTLVCYSYSKSLSLPG-ERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-DINAYKEN 312 (398)
T ss_dssp GTCSSEEEEEESTTTSSCTT-TCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-CHHHHHHH
T ss_pred hhcCCeEEEEehhhcCCCcc-ceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-HHHHHHHH
Confidence 12356799999999998666 457888888763 334444433332 3344555555444444322 34566778
Q ss_pred HHHHHHHHHcC
Q 012321 417 ALRMAKILEAH 427 (466)
Q Consensus 417 a~~La~~L~~~ 427 (466)
++.+.+.|+++
T Consensus 313 ~~~l~~~L~~~ 323 (398)
T 3ele_A 313 RDLLYEGLTRI 323 (398)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 88888888764
No 115
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.86 E-value=6.5e-20 Score=182.86 Aligned_cols=219 Identities=17% Similarity=0.159 Sum_probs=159.3
Q ss_pred CchhHHHHHHHHHhhhCCCc-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccC--CcEEEEeCC--
Q 012321 208 GNPTTVVVEEKMSALEGAES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVIDP-- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~-~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~--gi~v~~vd~-- 282 (466)
..+..+++++++++++|.+. .+++++|++|+.+++.+++++||+|+++.+.|+.++.. ..+... |.++..++.
T Consensus 41 ~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 118 (356)
T 1v72_A 41 TDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDEC--GAPEFFSNGAKLMTVDGPA 118 (356)
T ss_dssp CSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSST--THHHHHTTSCEEEECCCGG
T ss_pred cchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhcCCCCEEEEcCccchhhhhc--hHHHHHhCCcEEEEecCCC
Confidence 46888999999999999655 57778999999999999999999999999998775432 002333 777777764
Q ss_pred --CCHHHHHH-hccCC------CceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCC------Cccchh
Q 012321 283 --ADMEGLEA-ALNNN------NVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATP------LNQKAL 344 (466)
Q Consensus 283 --~D~e~Le~-ai~~~------~tklV~lesPsNPtG~v~---dl~~I~ela~~~gillIvD~t~a~~------~~~~pl 344 (466)
.|+++|++ ++++. ++++|++++|+| ||.++ ++++|.++|++||+++|+|++|..+ ......
T Consensus 119 ~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 197 (356)
T 1v72_A 119 AKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM 197 (356)
T ss_dssp GCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT
T ss_pred CeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh
Confidence 38999999 88751 489999999987 99954 5889999999999999999998532 111111
Q ss_pred --ccCCcEEEeccccccccccCceE-EEEEeChHHHHHHHHHHHHhCCCc--hHHHHHHHHHhhH--HHHHHHHHHHHHH
Q 012321 345 --SLGADLVLHSATKFIGGHNDVLA-GSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMK--TLHLRVQQQNSTA 417 (466)
Q Consensus 345 --~~gaDivv~S~sK~lgG~gdv~g-G~vvg~~eli~~l~~~~~~~G~~l--s~~~A~l~lrgL~--tl~~R~e~~~~na 417 (466)
..+.|+++.|+||+ +++ .| |+++++++++++++......|... ....+..+++.++ ....++++..+++
T Consensus 198 ~~~~~~d~~~~s~sK~-g~~---~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 273 (356)
T 1v72_A 198 TWKAGVDALSFGATKN-GVL---AAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAA 273 (356)
T ss_dssp TGGGTCCEEEECCGGG-TCS---SCEEEEESSGGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHH
T ss_pred hhhhcCCEEEEecccC-CCc---CccEEEEECHHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 23689999999999 443 34 789889999988876654444322 2222222233332 1234566778889
Q ss_pred HHHHHHHHcCCCcEEE
Q 012321 418 LRMAKILEAHPKVKRV 433 (466)
Q Consensus 418 ~~La~~L~~~p~V~~V 433 (466)
+++.+.|+++++++.+
T Consensus 274 ~~l~~~L~~~~g~~~~ 289 (356)
T 1v72_A 274 QRLAQGLEGLGGVEVL 289 (356)
T ss_dssp HHHHHHHTTCTTEEEE
T ss_pred HHHHHHHhhCCCcEEc
Confidence 9999999988877544
No 116
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.86 E-value=5e-21 Score=191.85 Aligned_cols=216 Identities=11% Similarity=0.111 Sum_probs=160.9
Q ss_pred cCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
+.+|+++....|++++++++|. ++.+++++|++|+.+++.++. ||+|+++.|+|.+.... +...|+++..++
T Consensus 44 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~~----~~~~g~~~~~v~ 117 (350)
T 3fkd_A 44 IRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYEDA----CRMYEHEVCFYP 117 (350)
T ss_dssp GGSCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHHH----HHHTTCEEEEEE
T ss_pred HhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHHH----HHHcCCeEEEEe
Confidence 4455556668999999999986 356666666799999998887 99999999999986543 445688888887
Q ss_pred C-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC-CEEEEeCCCCCCCccc-----h-hccCCcEEEe
Q 012321 282 P-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFATPLNQK-----A-LSLGADLVLH 353 (466)
Q Consensus 282 ~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~g-illIvD~t~a~~~~~~-----p-l~~gaDivv~ 353 (466)
. .+.+.+ ...++++|++++|+||||.+.++++|.++++.++ .++|+|++|....... . ...+.++++.
T Consensus 118 ~~~~~~~~----~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (350)
T 3fkd_A 118 SNEDIGEA----DFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVY 193 (350)
T ss_dssp TTSCGGGS----CCTTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEE
T ss_pred cCCccccC----ccCCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEe
Confidence 6 432322 2235899999999999999999999999998876 7999999987543211 1 1234569999
Q ss_pred ccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHHHHcCCCc
Q 012321 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 354 S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t---l~~R~e~~~~na~~La~~L~~~p~V 430 (466)
|+||+++.+| .+.|+++++++++++++.....+ ..++..++.+...++. +..+++++.++++.+.+.|+++|.+
T Consensus 194 S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 270 (350)
T 3fkd_A 194 SFSHAYGIPG-LRIGYIVANKDFMKRVAAFSTPW--AVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGV 270 (350)
T ss_dssp ESHHHHSCGG-GCCEEEECCHHHHHHHHTTCCTT--CSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTE
T ss_pred cCchhccCcc-hheEeEEeCHHHHHHHHHhCCCC--CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999998666 45789999999999887765433 4456655555555443 3345666668899999999998876
Q ss_pred EE
Q 012321 431 KR 432 (466)
Q Consensus 431 ~~ 432 (466)
..
T Consensus 271 ~~ 272 (350)
T 3fkd_A 271 EV 272 (350)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 117
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.86 E-value=3.3e-20 Score=196.97 Aligned_cols=217 Identities=14% Similarity=0.144 Sum_probs=155.4
Q ss_pred hhHHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHhc-cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC---
Q 012321 210 PTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g----~e~~v~~~SG~aAi~~al~all-~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd--- 281 (466)
..++.+.+.+.+..| .++.+++++|++++..++.+++ .+||+|+++.|.|......+ ...|.++..++
T Consensus 138 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~~ 213 (500)
T 3tcm_A 138 GLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASI----ALHGGALVPYYLNE 213 (500)
T ss_dssp HHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHH----HHTTCEEEEEECBT
T ss_pred HHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHH----HHcCCEEEEEeccc
Confidence 344444444444444 3567777777899999999998 89999999999999865443 34576666654
Q ss_pred ----CCCHHHHHHhccCC-----CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----chh
Q 012321 282 ----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL 344 (466)
Q Consensus 282 ----~~D~e~Le~ai~~~-----~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~pl 344 (466)
..|+++|++++++. ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .++
T Consensus 214 ~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~ 293 (500)
T 3tcm_A 214 STGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSF 293 (500)
T ss_dssp TTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCH
T ss_pred ccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcH
Confidence 45899999998751 4899999999999999986 567777799999999999998764331 111
Q ss_pred -----ccC------CcEEEecccccc-ccccCceEEEEEe---ChHHHHHHHHHHHHhCCCchHHHHHHHHH--------
Q 012321 345 -----SLG------ADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIR-------- 401 (466)
Q Consensus 345 -----~~g------aDivv~S~sK~l-gG~gdv~gG~vvg---~~eli~~l~~~~~~~G~~ls~~~A~l~lr-------- 401 (466)
.++ ..++++|+||.| |.+| .++||+++ ++++++.+++.... ..+.+....+++..
T Consensus 294 ~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~~~~~~ 371 (500)
T 3tcm_A 294 KKIVRSLGYGEEDLPLVSYQSVSKGYYGECG-KRGGYFEITGFSAPVREQIYKIASV-NLCSNITGQILASLVMNPPKAS 371 (500)
T ss_dssp HHHHHHTTCSSSCCCEEEEEESSSTTTCCGG-GCCEEEEEESCCTTHHHHHHHHHHT-TCCCCHHHHHHHHHHHSCCCSS
T ss_pred HHHHHHhccccCCeEEEEEecCCccCCCCCc-cceEEEEEeCCCHHHHHHHHHHHhc-ccCCCHHHHHHHHHHhcCcccc
Confidence 111 137789999999 4444 56888887 88999988876643 23334433333222
Q ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEE
Q 012321 402 ------GMKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 402 ------gL~tl~~R~e~~~~na~~La~~L~~~p~V~~ 432 (466)
..+.+..+.+++.++++.+.+.|+++|++..
T Consensus 372 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 408 (500)
T 3tcm_A 372 DESYASYKAEKDGILASLARRAKALEHAFNKLEGITC 408 (500)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 2244566677788899999999999887654
No 118
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.86 E-value=1.5e-20 Score=191.62 Aligned_cols=220 Identities=14% Similarity=0.135 Sum_probs=164.7
Q ss_pred CccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHHHHHhhc---
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL--- 270 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~-------pG-D~VLv~~~~y~~t~~~~~~~l--- 270 (466)
+.+.++.++...++++++++++|.++++++++|++|+.+++..++. +| |+|++.++.|++.........
T Consensus 73 ~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~ 152 (406)
T 4adb_A 73 HTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQP 152 (406)
T ss_dssp CCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCG
T ss_pred cccCCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCc
Confidence 3345667889999999999999999999999999999999988765 66 999999999988643322211
Q ss_pred ------ccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc-----cHHHHHHHHHhcCCEEEEeCCCCCC-
Q 012321 271 ------PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATP- 338 (466)
Q Consensus 271 ------~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~-----dl~~I~ela~~~gillIvD~t~a~~- 338 (466)
...+.++..++..|+++|++++++ ++++|+++ |+||+|.+. ++++|.++|+++|+++|+|++|...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~ 230 (406)
T 4adb_A 153 AYSQDFAPLPADIRHAAYNDINSASALIDD-STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVG 230 (406)
T ss_dssp GGTGGGCSCCSSEEEECTTCHHHHHTTCST-TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred cccccCCCCCCCceEeCCCcHHHHHHHhcC-CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 122245666777899999999986 49999998 999999765 6899999999999999999998632
Q ss_pred Cc-----cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHHHH
Q 012321 339 LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQ 411 (466)
Q Consensus 339 ~~-----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl--~~R~e 411 (466)
.. ........|++ ++||.++ +| .++|++++++++++.++..........++..+..+...++.+ +...+
T Consensus 231 ~~g~~~~~~~~~~~~d~~--t~sK~~~-~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 306 (406)
T 4adb_A 231 RTGELYAYMHYGVTPDLL--TTAKALG-GG-FPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLN 306 (406)
T ss_dssp TTSSSSHHHHHTCCCSEE--EECGGGG-TT-SCCEEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHH
T ss_pred ccchhHHHHhcCCCCCEE--Eechhhc-CC-CCeEEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 11 12233446777 5799999 44 468999999999887765443334455666666666666554 45566
Q ss_pred HHHHHHHHHHHHHHcC
Q 012321 412 QQNSTALRMAKILEAH 427 (466)
Q Consensus 412 ~~~~na~~La~~L~~~ 427 (466)
+..++++.+.+.|++.
T Consensus 307 ~~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 307 GVKQRHDWFVERLNTI 322 (406)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6777788887777654
No 119
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.86 E-value=5.3e-20 Score=195.50 Aligned_cols=225 Identities=12% Similarity=0.124 Sum_probs=160.1
Q ss_pred CccCCCCchhHHHHHHHHHhhhC-----CCcEEEeCCHHHHHHHHHHHhccCCC----EEEEcCCCccchHHHHHhhccc
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEG-----AESTVIMASGMSASTVMLLALVPAGG----HIVTTTDCYRKTRIFIETVLPK 272 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g-----~e~~v~~~SG~aAi~~al~all~pGD----~VLv~~~~y~~t~~~~~~~l~~ 272 (466)
|.......+.++++.+.+.+..| .++.++++++++++.+++.+++.+|| +|+++.|.|+.....+ ..
T Consensus 125 Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~----~~ 200 (498)
T 3ihj_A 125 YSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVI----SE 200 (498)
T ss_dssp ---CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHH----HH
T ss_pred CCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHH----HH
Confidence 44443334566777777776664 25677777777999999999998875 9999999999765433 34
Q ss_pred CCcEEEEeCC-------CCHHHHHHhccCC----CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCC
Q 012321 273 MGITATVIDP-------ADMEGLEAALNNN----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 273 ~gi~v~~vd~-------~D~e~Le~ai~~~----~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~ 338 (466)
.|.++..++. .|+++|++++++. ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...
T Consensus 201 ~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~ 280 (498)
T 3ihj_A 201 LDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDN 280 (498)
T ss_dssp TTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred cCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcccc
Confidence 5766665542 3899999998752 3899999999999999976 667999999999999999998765
Q ss_pred Cccc-----hh-c----cC------C-cEEEecccccccc-ccCceEEEEE---eChHHHHHHHHHHHHhCCCchHHHHH
Q 012321 339 LNQK-----AL-S----LG------A-DLVLHSATKFIGG-HNDVLAGSIS---GSGKLVTQIRNLHHVLGGALNPNAAY 397 (466)
Q Consensus 339 ~~~~-----pl-~----~g------a-Divv~S~sK~lgG-~gdv~gG~vv---g~~eli~~l~~~~~~~G~~ls~~~A~ 397 (466)
.... ++ . .+ . .++++|+||.+.| +| .++||++ +++++++.+....... .+.+....+
T Consensus 281 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G-~R~G~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~q~ 358 (498)
T 3ihj_A 281 VYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECG-YRGGYMEVINLHPEIKGQLVKLLSVR-LCPPVSGQA 358 (498)
T ss_dssp BCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSS-SCCEEEEEESCCHHHHHHHHHHHHHS-CCCCHHHHH
T ss_pred ccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcc-cceEEEEEecCCHHHHHHHHHHHhcc-CCCCHHHHH
Confidence 4321 11 0 11 1 3788999999954 44 5688887 6889999888776543 333333333
Q ss_pred HHHH--------------hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEE
Q 012321 398 LIIR--------------GMKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 398 l~lr--------------gL~tl~~R~e~~~~na~~La~~L~~~p~V~~ 432 (466)
.+.. .++.+..+.+++.++++.+.+.|+++|++..
T Consensus 359 a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 407 (498)
T 3ihj_A 359 AMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHC 407 (498)
T ss_dssp HHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred HHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEe
Confidence 2222 2344556667888999999999999887653
No 120
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.86 E-value=2.1e-20 Score=193.07 Aligned_cols=211 Identities=14% Similarity=0.154 Sum_probs=155.1
Q ss_pred hHHHHHHHHHhhh----C---C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 211 TTVVVEEKMSALE----G---A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~lA~l~----g---~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
....|++.+++++ | . ++.+++++|++|+.+++.+++++||+|+++.|.|.+....+ ...|.++..++
T Consensus 86 g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~ 161 (425)
T 1vp4_A 86 GDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAF----RQYLANFVVVP 161 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HTTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHH----HHcCCEEEEec
Confidence 3456777777766 7 3 34555555569999999999999999999999999866443 34577666654
Q ss_pred C----CCHHHHHHhccC-------CCceEEE-EeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----c
Q 012321 282 P----ADMEGLEAALNN-------NNVSLFF-TESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----Q 341 (466)
Q Consensus 282 ~----~D~e~Le~ai~~-------~~tklV~-lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~-----~ 341 (466)
. .|+++|++++++ .++++|+ +++|+||||.+.+ +++|.++|+++|+++|+|++|..... .
T Consensus 162 ~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~ 241 (425)
T 1vp4_A 162 LEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVD 241 (425)
T ss_dssp EETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCC
T ss_pred cCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCc
Confidence 3 489999998865 2489985 7999999999986 57899999999999999999876432 1
Q ss_pred ch--h-ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH------HHHHHHH
Q 012321 342 KA--L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQ 412 (466)
Q Consensus 342 ~p--l-~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t------l~~R~e~ 412 (466)
.. + ..+.++++.|+||+++ +| .+.|++++++++++.++........+.++..++.+...++. +..+.++
T Consensus 242 ~~~~~~~~~~~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (425)
T 1vp4_A 242 PIFKIGGPERVVLLNTFSKVLA-PG-LRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIEL 319 (425)
T ss_dssp CHHHHHCTTTEEEEEESTTTTC-GG-GCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHH
T ss_pred CHHHhCCCCCEEEEeccccccc-cc-cceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 11 1 1256799999999999 55 46899999999999888766554434456555555444443 3445566
Q ss_pred HHHHHHHHHHHHHcC
Q 012321 413 QNSTALRMAKILEAH 427 (466)
Q Consensus 413 ~~~na~~La~~L~~~ 427 (466)
+.++++.+.+.|+++
T Consensus 320 ~~~~~~~l~~~L~~~ 334 (425)
T 1vp4_A 320 YRRKRTVMLNALEEY 334 (425)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 677888888888874
No 121
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.86 E-value=1.8e-20 Score=187.04 Aligned_cols=213 Identities=11% Similarity=0.087 Sum_probs=155.0
Q ss_pred hhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 210 PTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
+..+++++++++++|. ++.+++++|++|+.+++.+++++ +.+++..+.|. .. +...++..|+++..++.
T Consensus 43 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~-~~--~~~~~~~~g~~~~~v~~~~~~ 118 (362)
T 3ffr_A 43 EVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFS-KR--FYEFAGELGREAYKEEAAFGK 118 (362)
T ss_dssp HHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHH-HH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHH-HH--HHHHHHHhCCCeEEEecCCCC
Confidence 5678899999999986 34666778889999999999987 55555555554 21 12344556888777653
Q ss_pred -CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc-CCEEEEeCCCCCCCccchhccCCcEEEeccccccc
Q 012321 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIG 360 (466)
Q Consensus 283 -~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~-gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lg 360 (466)
.|+++|+ +++ +|++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+........ +|+++.|+||+++
T Consensus 119 ~~d~~~l~--~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~-~d~~~~s~~K~~~ 194 (362)
T 3ffr_A 119 GFYPADIT--VPA-DAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTK-IDSVFFSVQKCFG 194 (362)
T ss_dssp CCCGGGCC--CCT-TCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTS-CSEEEEETTSTTC
T ss_pred CCCHHHHh--ccC-CccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChhH-CcEEEEecccccC
Confidence 3778887 555 499999999999999999999999999999 999999999876543222222 8999999999999
Q ss_pred cccCceEEEEEeChHHHHHHHHHHHH---------------------hCCCchHHHHHHHHHhhH---H--HHHHHHHHH
Q 012321 361 GHNDVLAGSISGSGKLVTQIRNLHHV---------------------LGGALNPNAAYLIIRGMK---T--LHLRVQQQN 414 (466)
Q Consensus 361 G~gdv~gG~vvg~~eli~~l~~~~~~---------------------~G~~ls~~~A~l~lrgL~---t--l~~R~e~~~ 414 (466)
++.+ +|+++.+++++++++..... ...+.+....+.+...++ . ++.+++++.
T Consensus 195 ~~~G--~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 272 (362)
T 3ffr_A 195 LPAG--LGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTE 272 (362)
T ss_dssp CCSC--CEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CCCc--eEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 5442 47888899998888765430 022233333222222222 1 567788888
Q ss_pred HHHHHHHHHHHcCCCcEE
Q 012321 415 STALRMAKILEAHPKVKR 432 (466)
Q Consensus 415 ~na~~La~~L~~~p~V~~ 432 (466)
++++.+.+.|+++|++..
T Consensus 273 ~~~~~l~~~L~~~~g~~~ 290 (362)
T 3ffr_A 273 EKAALINTYIESSKVFSF 290 (362)
T ss_dssp HHHHHHHHHHHHCSSEEE
T ss_pred HHHHHHHHHHHHccCcee
Confidence 999999999999987754
No 122
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.86 E-value=1.6e-20 Score=191.74 Aligned_cols=214 Identities=17% Similarity=0.232 Sum_probs=156.3
Q ss_pred hHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~----g~----e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
....|++.+++++ |. ++.+++++|++|+.+++.+++++||+|+++.|+|.+.... +...|+++..++.
T Consensus 76 ~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~~ 151 (407)
T 2zc0_A 76 GIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLA----FEQLGAKIEGVPV 151 (407)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHTTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHH----HHHcCCEEEEccc
Confidence 3567777777777 72 4555555567999999999999999999999999986543 3445777666543
Q ss_pred ----CCHHHHHHhcc----C-CCceEE-EEeCCCCCCcccccHH---HHHHHHHhcCCEEEEeCCCCCCCcc-----chh
Q 012321 283 ----ADMEGLEAALN----N-NNVSLF-FTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQ-----KAL 344 (466)
Q Consensus 283 ----~D~e~Le~ai~----~-~~tklV-~lesPsNPtG~v~dl~---~I~ela~~~gillIvD~t~a~~~~~-----~pl 344 (466)
.|+++|+++++ + .++++| ++++|+||||.+.+++ +|.++|+++|+++|+|++|+..... ...
T Consensus 152 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 231 (407)
T 2zc0_A 152 DNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLK 231 (407)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGG
T ss_pred CCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChh
Confidence 48999999987 5 248987 4789999999999876 9999999999999999998764321 111
Q ss_pred cc---CCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH-------HHHHHHHHHH
Q 012321 345 SL---GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-------TLHLRVQQQN 414 (466)
Q Consensus 345 ~~---gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~-------tl~~R~e~~~ 414 (466)
.+ +.++++.|+||+++ +| .++|++++++++++.++......+...++...+.+...++ .+..+.+++.
T Consensus 232 ~~~~~~~~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 309 (407)
T 2zc0_A 232 ALDNEGRVIVAGTLSKVLG-TG-FRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYK 309 (407)
T ss_dssp GGCSSCCEEEEEESTTTTC-TT-SCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHH
T ss_pred hcCCCCCEEEEcccccccC-CC-cceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 22 45689999999999 55 4589999999999988876655444445554444433333 2334455667
Q ss_pred HHHHHHHHHHHc-CCCc
Q 012321 415 STALRMAKILEA-HPKV 430 (466)
Q Consensus 415 ~na~~La~~L~~-~p~V 430 (466)
++++.+.+.|++ .|.+
T Consensus 310 ~~~~~l~~~L~~~~~~~ 326 (407)
T 2zc0_A 310 EKRDIMLKALENHLPNA 326 (407)
T ss_dssp HHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 788888888876 3543
No 123
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.85 E-value=3.8e-20 Score=189.78 Aligned_cols=214 Identities=13% Similarity=0.116 Sum_probs=149.2
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e---~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
.+.++++.+++....+.+ +.+++++|++|+..++.+++++||+|++++|.|......+ ...|.++..++.
T Consensus 82 ~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~ 157 (413)
T 3t18_A 82 KDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKIC----EEFGRNFKTFEFFTD 157 (413)
T ss_dssp HHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHH----HHHTCEEEEECCBCT
T ss_pred HHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHH----HHhCCeEEEeeccCC
Confidence 344555555555555555 6666677779999999999999999999999999865443 345777777653
Q ss_pred ---CCHHHHHHhccCC---Cce-EEEEeCC-CCCCcccccHHHH---HHHHH------hcCCEEEEeCCCCCCCcc----
Q 012321 283 ---ADMEGLEAALNNN---NVS-LFFTESP-TNPFLRCVDVKLV---SDLCH------KKGAIVCIDGTFATPLNQ---- 341 (466)
Q Consensus 283 ---~D~e~Le~ai~~~---~tk-lV~lesP-sNPtG~v~dl~~I---~ela~------~~gillIvD~t~a~~~~~---- 341 (466)
.|+++|++++++. +++ +|++++| +||||.+.+.+++ +++|+ ++|+++|+|++|......
T Consensus 158 ~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~ 237 (413)
T 3t18_A 158 DFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQ 237 (413)
T ss_dssp TSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTT
T ss_pred CCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhH
Confidence 3799999998751 266 8999999 9999999986554 45555 899999999997542211
Q ss_pred ch-hc----cCCc---EEEeccccccccccCceEEEEEe---ChHHHHHHHHHHHHhC----CCchHHHHHHHHHhhH--
Q 012321 342 KA-LS----LGAD---LVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHVLG----GALNPNAAYLIIRGMK-- 404 (466)
Q Consensus 342 ~p-l~----~gaD---ivv~S~sK~lgG~gdv~gG~vvg---~~eli~~l~~~~~~~G----~~ls~~~A~l~lrgL~-- 404 (466)
.+ .. .+.+ +++.|+||.++.+|. +.|++++ ++++++.++..+.... ...+...+..+...++
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 316 (413)
T 3t18_A 238 RKFFEKFSNLPRNLFVVVAFSMSKSHTAYGL-RSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAE 316 (413)
T ss_dssp TGGGGGGTTCCTTEEEEEEEEHHHHTTCGGG-CCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHH
T ss_pred HHHHHHHhhcCCCeeEEEEEecCccCCCcCc-CcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcCh
Confidence 11 11 1223 788999999997774 5788888 8999998877654321 2344554444443332
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHcC
Q 012321 405 -------TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 -------tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+....+++.++.+.+.+.|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 346 (413)
T 3t18_A 317 NKKIYEQELVDLRNMLKSRADVFVTAAKEN 346 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 22334556677888888888876
No 124
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.85 E-value=2.9e-20 Score=187.34 Aligned_cols=214 Identities=14% Similarity=0.109 Sum_probs=156.6
Q ss_pred hhHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC----
Q 012321 210 PTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID---- 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~-~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd---- 281 (466)
+..+++++++++++|.+ +.++ +++|++|+.+++.+++++||+|++.++.|.+.. .. ..+...|+++..++
T Consensus 52 ~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~-~~-~~~~~~g~~~~~v~~~~~ 129 (376)
T 3f0h_A 52 STMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHR-FV-QLCEIHEIPYVALKLEHG 129 (376)
T ss_dssp HHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHH-HH-HHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHH-HH-HHHHHcCCceEEEeCCCC
Confidence 66788999999999874 4555 456689999999999999999999998777633 22 33445577666654
Q ss_pred -CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEecccccc
Q 012321 282 -PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (466)
Q Consensus 282 -~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK~l 359 (466)
..|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......|+|+++.|++|++
T Consensus 130 ~~~d~~~l~~~~~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l 208 (376)
T 3f0h_A 130 KKLTKEKLYEYDNQN-FTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVL 208 (376)
T ss_dssp CCCCHHHHHTTTTSC-CCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTT
T ss_pred CCCCHHHHHHhhccC-ceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccc
Confidence 25899999988764 99999999999999999999999999999999999999876433 2333458999999999999
Q ss_pred ccccCceEEEEEeChHHHHHHHHHHH------------H-----hCCCchHHH---HHHHHHhhH---HHHHHHHHHHHH
Q 012321 360 GGHNDVLAGSISGSGKLVTQIRNLHH------------V-----LGGALNPNA---AYLIIRGMK---TLHLRVQQQNST 416 (466)
Q Consensus 360 gG~gdv~gG~vvg~~eli~~l~~~~~------------~-----~G~~ls~~~---A~l~lrgL~---tl~~R~e~~~~n 416 (466)
+++.+ .|+++.+++++++++.... . .....+... +..+++.++ .++.+.++..++
T Consensus 209 ~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 286 (376)
T 3f0h_A 209 ACPPG--ISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQ 286 (376)
T ss_dssp CCCSS--CEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred cCCCc--eEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 95432 4788999998887763210 0 011222211 122222222 245566777788
Q ss_pred HHHHHHHHHcCC
Q 012321 417 ALRMAKILEAHP 428 (466)
Q Consensus 417 a~~La~~L~~~p 428 (466)
++++.+.|++.+
T Consensus 287 ~~~l~~~L~~~~ 298 (376)
T 3f0h_A 287 AADFRAKIKDLP 298 (376)
T ss_dssp HHHHHHHTTTSS
T ss_pred HHHHHHHHHHcC
Confidence 888888888764
No 125
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.85 E-value=9.5e-21 Score=189.06 Aligned_cols=213 Identities=16% Similarity=0.174 Sum_probs=154.9
Q ss_pred hhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhccCCCEEEEcC-CCccchHHHHHhhcccCCcEEEEeCC--
Q 012321 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e----~~v~~~SG~aAi~~al~all~pGD~VLv~~-~~y~~t~~~~~~~l~~~gi~v~~vd~-- 282 (466)
+...++++++++++|.+ +.+++++|++|+..++.+++++||+|++.. +.|+..+ ...+...|+++..++.
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~---~~~~~~~g~~~~~v~~~~ 113 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARM---VEMAGLMGIAHHAYDCGE 113 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHH---HHHHHHHTCCEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHH---HHHHHHhCCceEEEeCCC
Confidence 67889999999999842 477788888999999999999999988776 4454432 1233445666666542
Q ss_pred ---CCHHHHHHhccCC-CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-chhccCCcEEEecccc
Q 012321 283 ---ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATK 357 (466)
Q Consensus 283 ---~D~e~Le~ai~~~-~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~-~pl~~gaDivv~S~sK 357 (466)
.|+++|+++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+... .....+.|+++.|++|
T Consensus 114 ~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K 193 (366)
T 1m32_A 114 VARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANK 193 (366)
T ss_dssp TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSS
T ss_pred CCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcc
Confidence 5899999999753 4899999999999999999999999999999999999998754322 2223468999999999
Q ss_pred ccccccCceEEEEEeChHHHHHHHHH------------H---HHhC---CCchHHHHHHHHHhhHH------HHHHHHHH
Q 012321 358 FIGGHNDVLAGSISGSGKLVTQIRNL------------H---HVLG---GALNPNAAYLIIRGMKT------LHLRVQQQ 413 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~~eli~~l~~~------------~---~~~G---~~ls~~~A~l~lrgL~t------l~~R~e~~ 413 (466)
+++++.+ .|+++++++++++++.. . ...+ .+.+....+.+...++. +....++.
T Consensus 194 ~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 271 (366)
T 1m32_A 194 CIQGVPG--FAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRY 271 (366)
T ss_dssp TTCCCSS--EEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccCCCc--eEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHH
Confidence 8866542 49999998887665421 0 0001 23444433333333332 34566777
Q ss_pred HHHHHHHHHHHHcC
Q 012321 414 NSTALRMAKILEAH 427 (466)
Q Consensus 414 ~~na~~La~~L~~~ 427 (466)
.++++.+.+.|+++
T Consensus 272 ~~~~~~l~~~L~~~ 285 (366)
T 1m32_A 272 QQNQRSLVAGMRAL 285 (366)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC
Confidence 88899999999875
No 126
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.85 E-value=1e-19 Score=183.31 Aligned_cols=214 Identities=14% Similarity=0.157 Sum_probs=153.5
Q ss_pred hHHHHHHHHHhhhCC------CcEEEeCCHHHHHHHHHHHhc---cCCCEEEEcCC-CccchHHHHHhhcccCCcEEEEe
Q 012321 211 TTVVVEEKMSALEGA------ESTVIMASGMSASTVMLLALV---PAGGHIVTTTD-CYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~------e~~v~~~SG~aAi~~al~all---~pGD~VLv~~~-~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
...+++++++++++. ++.+++++|++|+.+++.++. ++||+|++.++ .|+... ...+...|+++..+
T Consensus 39 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~---~~~~~~~g~~~~~v 115 (385)
T 2bkw_A 39 IFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRF---ADCLRSYGAQVDVV 115 (385)
T ss_dssp HHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHH---HHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHH---HHHHHHcCCceEEE
Confidence 356678888888775 345666777899999999987 89999988744 454432 12345568888887
Q ss_pred CC------CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCc-cchhccCCcEE
Q 012321 281 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-QKALSLGADLV 351 (466)
Q Consensus 281 d~------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~--gillIvD~t~a~~~~-~~pl~~gaDiv 351 (466)
+. .|+++|++++++.++++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+.. .....+++|++
T Consensus 116 ~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~ 195 (385)
T 2bkw_A 116 RPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFA 195 (385)
T ss_dssp CCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEE
T ss_pred ecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEE
Confidence 65 4899999999763489999999999999999999999999999 999999999875432 22234578999
Q ss_pred EeccccccccccCceEEEEEeChHHHH-HHH------------------HHH--HHhC-----CCchHHHHHHHHHhhHH
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVT-QIR------------------NLH--HVLG-----GALNPNAAYLIIRGMKT 405 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~-~l~------------------~~~--~~~G-----~~ls~~~A~l~lrgL~t 405 (466)
+.|+||+++|+.+ .|++++++++++ +++ ... ...+ .+.+....+.+...++.
T Consensus 196 ~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 273 (385)
T 2bkw_A 196 LTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKE 273 (385)
T ss_dssp EEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHH
T ss_pred EecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999998876432 388889988776 542 111 1111 23344333322223332
Q ss_pred -----HHHHHHHHHHHHHHHHHHH-HcCCCc
Q 012321 406 -----LHLRVQQQNSTALRMAKIL-EAHPKV 430 (466)
Q Consensus 406 -----l~~R~e~~~~na~~La~~L-~~~p~V 430 (466)
++.+.++..++++.+.+.| ++. ++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~ 303 (385)
T 2bkw_A 274 ILEEGLHKRWDLHREMSDWFKDSLVNGL-QL 303 (385)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTT-CC
T ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHhc-Cc
Confidence 4456677888999999999 776 44
No 127
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.85 E-value=6.4e-20 Score=189.85 Aligned_cols=211 Identities=15% Similarity=0.157 Sum_probs=152.4
Q ss_pred HHHHHHHHHhhhC----------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcc-cCCcEEEEe
Q 012321 212 TVVVEEKMSALEG----------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVI 280 (466)
Q Consensus 212 ~~~Lee~lA~l~g----------~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~-~~gi~v~~v 280 (466)
..+|+++++++++ .++++++++|++|+..++.+++++||+|+++.+.|++.... +. ..|.++..+
T Consensus 88 ~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~~~~~ 163 (435)
T 3piu_A 88 LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRD----LKWRTGVEIVPI 163 (435)
T ss_dssp CHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----TTTTTCCEEEEE
T ss_pred cHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHH----HHHhcCCEEEEe
Confidence 5678888888776 46777777888999999999999999999999999986532 33 467777776
Q ss_pred CC-------CCHHHHHHhccC-----CCceEEEEeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCc-----
Q 012321 281 DP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN----- 340 (466)
Q Consensus 281 d~-------~D~e~Le~ai~~-----~~tklV~lesPsNPtG~v~dl---~~I~ela~~~gillIvD~t~a~~~~----- 340 (466)
+. .|+++|++++++ .++++|++++|+||||.+++. ++|.++|+++|+++|+|++|+....
T Consensus 164 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~ 243 (435)
T 3piu_A 164 HCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSF 243 (435)
T ss_dssp ECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCC
T ss_pred eCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Confidence 53 489999999865 248999999999999999864 7888889999999999999865221
Q ss_pred cchh----c---------cCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCc-hHHHHHHHHHhhH-
Q 012321 341 QKAL----S---------LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGAL-NPNAAYLIIRGMK- 404 (466)
Q Consensus 341 ~~pl----~---------~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~l-s~~~A~l~lrgL~- 404 (466)
.... + .+.++++.|+||.++.+| .+.|++++ ++++++.++......+... .+..+..++...+
T Consensus 244 ~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 322 (435)
T 3piu_A 244 ISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKL 322 (435)
T ss_dssp CCHHHHHHC-------CGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHH
T ss_pred cCHHHhccccccccccCCCCCEEEEEeeecccCCCc-eeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcChHH
Confidence 1111 1 122388999999998665 45788888 5677777776554433221 1222222233222
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHcC
Q 012321 405 ---TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 ---tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+..+.+++.++++.+.+.|+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (435)
T 3piu_A 323 TKNYIAENHKRLKQRQKKLVSGLQKS 348 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 23445566778888899999876
No 128
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.85 E-value=2.1e-20 Score=185.56 Aligned_cols=214 Identities=13% Similarity=0.136 Sum_probs=155.8
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 210 PTTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~~-~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
+...++++++++++|.+ +.+++ ++|++|+..++.++++ |+|+++++.|++. . +...++..|+++..++.
T Consensus 33 ~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~-~-~~~~~~~~g~~~~~v~~~~~ 108 (353)
T 2yrr_A 33 RVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQ-R-VAEMAALHGLDPEVLDFPPG 108 (353)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHH-H-HHHHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchH-H-HHHHHHHcCCceEEEeCCCC
Confidence 44789999999999973 44554 5667999999988876 8999999999875 2 22334556777777653
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEecccccc
Q 012321 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (466)
Q Consensus 283 --~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK~l 359 (466)
.|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. .....++.|+++.|++|++
T Consensus 109 ~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 188 (353)
T 2yrr_A 109 EPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCL 188 (353)
T ss_dssp SCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTT
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccc
Confidence 5899999999762389999999999999999999999999999999999999864432 2223357899999999987
Q ss_pred ccccCceEEEEEeChHHHHHHHH----------H---H--HHhCCCchHHHHHHHHHhhHH-----HHHHHHHHHHHHHH
Q 012321 360 GGHNDVLAGSISGSGKLVTQIRN----------L---H--HVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALR 419 (466)
Q Consensus 360 gG~gdv~gG~vvg~~eli~~l~~----------~---~--~~~G~~ls~~~A~l~lrgL~t-----l~~R~e~~~~na~~ 419 (466)
+++.+ .|+++++++++++++. . . .....+.+....+.+...++. ++...++..+++++
T Consensus 189 ~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 266 (353)
T 2yrr_A 189 SAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAW 266 (353)
T ss_dssp CCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred cCCCc--eEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 66442 4899999998876641 0 0 111223344333322222222 45567778888999
Q ss_pred HHHHHHcCCCc
Q 012321 420 MAKILEAHPKV 430 (466)
Q Consensus 420 La~~L~~~p~V 430 (466)
+.+.|++. ++
T Consensus 267 l~~~L~~~-g~ 276 (353)
T 2yrr_A 267 VLEELKAR-GF 276 (353)
T ss_dssp HHHHHHHT-TC
T ss_pred HHHHHHHC-CC
Confidence 99999876 44
No 129
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.85 E-value=3.5e-19 Score=181.72 Aligned_cols=211 Identities=12% Similarity=0.051 Sum_probs=143.5
Q ss_pred HHHHHHHHHhhhC--------CCcEEE--eCCHHHHHHHHHHHhc---cCCCEEEEcCCCccchHHHHHhhcccCCcEEE
Q 012321 212 TVVVEEKMSALEG--------AESTVI--MASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 212 ~~~Lee~lA~l~g--------~e~~v~--~~SG~aAi~~al~all---~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~ 278 (466)
...|++.++++++ .++.++ +++|++|+.+++..+. ++||+|++++|+|......+ +..|.++.
T Consensus 73 ~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~ 148 (401)
T 7aat_A 73 LADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIF----RDAGLQLQ 148 (401)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHH----HHTTCEEE
T ss_pred CHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHH----HHcCCeeE
Confidence 4456666666553 345554 5666699998876654 89999999999999876544 34566666
Q ss_pred EeCC-------CCHHHHHHhccC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccch---
Q 012321 279 VIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA--- 343 (466)
Q Consensus 279 ~vd~-------~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~p--- 343 (466)
.++. .|++++++.+++ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|........
T Consensus 149 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 228 (401)
T 7aat_A 149 AYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRD 228 (401)
T ss_dssp EEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHH
T ss_pred eeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCcccc
Confidence 5542 267766666642 24899999999999998875 77889999999999999999876543211
Q ss_pred --------hccCCcEEEeccccccccccCceEEEEEe---ChH----HHHHHHHHHHHhCCCchHHHHHHHHHh------
Q 012321 344 --------LSLGADLVLHSATKFIGGHNDVLAGSISG---SGK----LVTQIRNLHHVLGGALNPNAAYLIIRG------ 402 (466)
Q Consensus 344 --------l~~gaDivv~S~sK~lgG~gdv~gG~vvg---~~e----li~~l~~~~~~~G~~ls~~~A~l~lrg------ 402 (466)
......+++.|+||.++.+|.. .|+++. +++ +++.++..........+...+..+...
T Consensus 229 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~R-iG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 307 (401)
T 7aat_A 229 AWALRHFIEQGIDVVLSQSYAKNMGLYGER-AGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPEL 307 (401)
T ss_dssp THHHHHHHHTTCCCEEEEECTTTSCCGGGC-EEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHhcCCcEEEEecCCcccccccCc-eEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHH
Confidence 1123568999999999988854 566554 565 445555544443333334433333221
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 403 ----MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 403 ----L~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+.+....++..++++.+.+.|+++
T Consensus 308 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 308 RKEWLVEVKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2335555667778888999999876
No 130
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.84 E-value=1.1e-19 Score=186.78 Aligned_cols=212 Identities=14% Similarity=0.136 Sum_probs=145.7
Q ss_pred hHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 211 TTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~e---~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
.++++.+.+....+.+ +.+++++|++|+..++.+++++||+|++++|+|...... +...|.++..++.
T Consensus 85 lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~v~~~~~~~ 160 (418)
T 3rq1_A 85 FLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVI----CSDTGRTLVTYSLFDEHN 160 (418)
T ss_dssp HHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHH----HHHTTCEEEEECSBCTTS
T ss_pred HHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHH----HHHcCCEEEEEeeeCCCC
Confidence 3444444444444555 666666777999999999999999999999999886543 3456777777753
Q ss_pred -CCHHHHHHhccCC---Cce-EEEEeCC-CCCCcccccHHH---HHHHHH------hcCCEEEEeCCCCCCCccc----h
Q 012321 283 -ADMEGLEAALNNN---NVS-LFFTESP-TNPFLRCVDVKL---VSDLCH------KKGAIVCIDGTFATPLNQK----A 343 (466)
Q Consensus 283 -~D~e~Le~ai~~~---~tk-lV~lesP-sNPtG~v~dl~~---I~ela~------~~gillIvD~t~a~~~~~~----p 343 (466)
.|+++|++++++. +++ +|++++| +||||.+.+.++ |+++|+ ++|+++|+|++|....... +
T Consensus 161 ~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~ 240 (418)
T 3rq1_A 161 NFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRA 240 (418)
T ss_dssp SBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHG
T ss_pred CcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHH
Confidence 3789999988741 255 8999999 999999998654 555565 8999999999986432211 1
Q ss_pred -hc----cCCc---EEEeccccccccccCceEEEEEe---ChHHHHHHHHHHHHhC----CCchHHHHHHHHHhhH----
Q 012321 344 -LS----LGAD---LVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHVLG----GALNPNAAYLIIRGMK---- 404 (466)
Q Consensus 344 -l~----~gaD---ivv~S~sK~lgG~gdv~gG~vvg---~~eli~~l~~~~~~~G----~~ls~~~A~l~lrgL~---- 404 (466)
.. ...| +++.|+||.++.+|. +.|++++ ++++++.++..+.... ...+...+..+...++
T Consensus 241 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 319 (418)
T 3rq1_A 241 FFNKFSHLPKEILTCVCYSLSKGFTMYGQ-RVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAK 319 (418)
T ss_dssp GGGGGTTCCTTEEEEEEEESTTTTTCCSS-CCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHH
T ss_pred HHHHHHhcCCCceEEEEEeCCCCCcCcCC-cceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHH
Confidence 11 1223 788999999987774 5688888 8999988877654321 2344444443333322
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHcC
Q 012321 405 ------TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 ------tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+....++..++++.+.+.|+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 320 FKEYEAERNCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22233455667778888888765
No 131
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.84 E-value=1.1e-19 Score=185.19 Aligned_cols=213 Identities=16% Similarity=0.185 Sum_probs=166.9
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-------ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-------l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
..+...++++.+++++|.+++++++||++|+..++.++ +++||+|+++.++|.++...+ ...|.++.++
T Consensus 32 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~----~~~g~~~~~~ 107 (390)
T 3b8x_A 32 MGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPL----QQYGLRVKFV 107 (390)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHH----HHTTCEEEEE
T ss_pred CChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEE
Confidence 46889999999999999999999999999999999998 789999999999999876543 3467787777
Q ss_pred CCC------CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCC--cEEE
Q 012321 281 DPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA--DLVL 352 (466)
Q Consensus 281 d~~------D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~ga--Divv 352 (466)
+.. |+++|+++++++ +++|+++ |++|...|+++|.++|+++|+++|+|++++.+........|. |+.+
T Consensus 108 ~~~~~~~~~d~~~l~~~i~~~-~~~v~~~---~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~ 183 (390)
T 3b8x_A 108 DIDINTLNIDIESLKEAVTDS-TKAILTV---NLLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGT 183 (390)
T ss_dssp CBCTTTCSBCHHHHHHHCCTT-EEEEEEE---CGGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTEETTSSSSEEE
T ss_pred ecCccccCcCHHHHHHHhCcC-CeEEEEE---CCccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCcccccccceEE
Confidence 532 899999999874 9999996 356777999999999999999999999998765444444565 4444
Q ss_pred ecc--ccccccccCceEEEEEeCh-HHHHHHHHHHHH-----------------------------hC--CCchHHHHHH
Q 012321 353 HSA--TKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----------------------------LG--GALNPNAAYL 398 (466)
Q Consensus 353 ~S~--sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~~-----------------------------~G--~~ls~~~A~l 398 (466)
.|+ +|.++++ .||++++++ ++.++++..... .| ..+++..+++
T Consensus 184 ~s~~~~k~~~~g---~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~ 260 (390)
T 3b8x_A 184 FSSFYSNHIATM---EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAI 260 (390)
T ss_dssp EECCTTSSSCSS---SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHH
T ss_pred EEccCCCCCccC---CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHH
Confidence 432 3444332 368998875 677766654321 11 1166778888
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcE
Q 012321 399 IIRGMKTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 399 ~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~ 431 (466)
++..++.++.++++..++++++.+.|+++|+++
T Consensus 261 ~l~~l~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 293 (390)
T 3b8x_A 261 GIEQLKKLPRFISVRRKNAEYFLDKFKDHPYLD 293 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 877888898889999999999999999988764
No 132
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.84 E-value=5.6e-20 Score=189.83 Aligned_cols=211 Identities=13% Similarity=0.064 Sum_probs=151.6
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHHHHH--HHHHHHhcc--C----------CCEEEEcCCCccchHHHHHhhcccC
Q 012321 210 PTTVVVEEKMSALEGA--ESTVIMASGMSAS--TVMLLALVP--A----------GGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi--~~al~all~--p----------GD~VLv~~~~y~~t~~~~~~~l~~~ 273 (466)
.....|++.|+++++. ++.++++++++++ .+++.+++. + ||+|++++|+|......+ +..
T Consensus 78 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~----~~~ 153 (427)
T 3ppl_A 78 DGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSIT----ERF 153 (427)
T ss_dssp SCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHH----HHT
T ss_pred CCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHH----HHc
Confidence 3467899999999886 3455555555888 478888877 6 999999999999866443 345
Q ss_pred CcEEEEeCC----CCHHHHHHhccCCCceEEEEe-CCCCCCcccccHH---HHHHHH-HhcCCEEEEeCCCCCCCcc---
Q 012321 274 GITATVIDP----ADMEGLEAALNNNNVSLFFTE-SPTNPFLRCVDVK---LVSDLC-HKKGAIVCIDGTFATPLNQ--- 341 (466)
Q Consensus 274 gi~v~~vd~----~D~e~Le~ai~~~~tklV~le-sPsNPtG~v~dl~---~I~ela-~~~gillIvD~t~a~~~~~--- 341 (466)
|.++..++. .|+++|+++++..++++|++. +|+||||.+++.+ +|+++| +++|+++|+|++|....+.
T Consensus 154 g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~ 233 (427)
T 3ppl_A 154 GFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEF 233 (427)
T ss_dssp TCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCC
Confidence 766666542 489999999954459999876 7899999999876 888888 9999999999998753211
Q ss_pred ----chh-------ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH-----
Q 012321 342 ----KAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----- 405 (466)
Q Consensus 342 ----~pl-------~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t----- 405 (466)
... ..+.++++.|+||+ +++| .+.|++++++++++.++......+...+.+.++.+...++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 311 (427)
T 3ppl_A 234 PEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAG-AGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVR 311 (427)
T ss_dssp CCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHH
T ss_pred CCccchhhhhhccCCCCcEEEEechhhc-cCcC-ccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHH
Confidence 111 23567999999999 5555 46799999999999998887766666666655544433332
Q ss_pred --HHHHHHHHHHHHHHHHHHHHc
Q 012321 406 --LHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 406 --l~~R~e~~~~na~~La~~L~~ 426 (466)
+....+...++.+.+.+.|.+
T Consensus 312 ~~~~~~~~~~~~~~~~l~~~L~~ 334 (427)
T 3ppl_A 312 AVMRKHAASLAPKFNKVLEILDS 334 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 233334445566666666644
No 133
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.84 E-value=7.3e-20 Score=194.30 Aligned_cols=215 Identities=12% Similarity=0.068 Sum_probs=159.9
Q ss_pred HHHHHHHHHhhhCCC----cE--EEeCCHHHHHHHHHHHhccCC--------CEEEEcCCCccchHHHHHhhcccCCcEE
Q 012321 212 TVVVEEKMSALEGAE----ST--VIMASGMSASTVMLLALVPAG--------GHIVTTTDCYRKTRIFIETVLPKMGITA 277 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e----~~--v~~~SG~aAi~~al~all~pG--------D~VLv~~~~y~~t~~~~~~~l~~~gi~v 277 (466)
.+++++++++++|.+ +. +++++|++|+..++.++..+| |+|+++.+.|.+.... +...|+++
T Consensus 141 e~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~----~~~~G~~v 216 (514)
T 3mad_A 141 EAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKA----AQYFGIKL 216 (514)
T ss_dssp HHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHH----HHHHTCEE
T ss_pred HHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHH----HHHcCCee
Confidence 345566778888875 44 788888899999999998776 9999999999986543 33457888
Q ss_pred EEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc------------
Q 012321 278 TVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------------ 340 (466)
Q Consensus 278 ~~vd~~-----D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~------------ 340 (466)
..++.. |+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++|++||+|++|+.+..
T Consensus 217 ~~v~~~~~~~~d~~~Le~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~ 295 (514)
T 3mad_A 217 VRTPLDADYRADVAAMREAITPN-TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPP 295 (514)
T ss_dssp EEECBCTTSCBCHHHHHHHCCTT-EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCC
T ss_pred EEeeeCCCCCCCHHHHHHHhccC-CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCc
Confidence 877643 899999999874 99999999999999999999999999999999999999876432
Q ss_pred cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH------------HhCCCc--hHHHHHHHHHh--hH
Q 012321 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH------------VLGGAL--NPNAAYLIIRG--MK 404 (466)
Q Consensus 341 ~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~------------~~G~~l--s~~~A~l~lrg--L~ 404 (466)
......|+|+++.|++|++.++. ..|+++.+++.+.+...... ..|... ....+|.+++. ..
T Consensus 296 ~~~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~ 373 (514)
T 3mad_A 296 FDFRLEGVTSVSADTHKYGYGAK--GTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEE 373 (514)
T ss_dssp CSTTSTTCCEEEECTTTTTCCCS--SCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcEEEECchhccCCCC--CeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHH
Confidence 22234578999999999966554 24777666554433211000 011111 12345555543 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcEEE
Q 012321 405 TLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 405 tl~~R~e~~~~na~~La~~L~~~p~V~~V 433 (466)
.+..++++..++++++.+.|++.|+++.+
T Consensus 374 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 402 (514)
T 3mad_A 374 GYLDATRRILQAADRLKAGVRAIPSLKIL 402 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTCEES
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Confidence 56778889999999999999998877543
No 134
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.84 E-value=5.2e-20 Score=190.57 Aligned_cols=215 Identities=13% Similarity=0.102 Sum_probs=149.8
Q ss_pred HHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHhccCCC--------------EEEEc-CCCccchHHHHH-
Q 012321 212 TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGG--------------HIVTT-TDCYRKTRIFIE- 267 (466)
Q Consensus 212 ~~~Lee~lA~l~----g----~e~~v~~~SG~aAi~~al~all~pGD--------------~VLv~-~~~y~~t~~~~~- 267 (466)
...|++.+++++ | .++.+++++|++|+.+++.+++++|| +|+++ .|.|........
T Consensus 85 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~ 164 (444)
T 3if2_A 85 DSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVE 164 (444)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSS
T ss_pred CHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccc
Confidence 456777777665 2 36788888888999999999999998 88876 889987542210
Q ss_pred -hhcccCCcEEEEeC----------CCCHHHHHHh---ccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEE
Q 012321 268 -TVLPKMGITATVID----------PADMEGLEAA---LNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVC 330 (466)
Q Consensus 268 -~~l~~~gi~v~~vd----------~~D~e~Le~a---i~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillI 330 (466)
..+...+..+..++ ..|+++|+++ +++ ++++|++++|+||||.+++ +++|.++|+++|+++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li 243 (444)
T 3if2_A 165 GQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLI 243 (444)
T ss_dssp SCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEE
T ss_pred cchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEE
Confidence 02344566665544 3589999988 565 4999999999999999998 8889999999999999
Q ss_pred EeCCCCCCCc------cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH
Q 012321 331 IDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (466)
Q Consensus 331 vD~t~a~~~~------~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~ 404 (466)
+|++|+.+.. ..+...+.++++.|+||+ +++| .+.|++++++++++.++......+...++..+..+...++
T Consensus 244 ~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 321 (444)
T 3if2_A 244 IDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPG-MRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVA 321 (444)
T ss_dssp EECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGG-GCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred EECCCCCcccccccccccccCCCCEEEEechhhc-cCCC-CceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHH
Confidence 9999975322 111224678999999997 5555 4679999999999998877665443333333333222222
Q ss_pred H------HHH-HHHHHHHHHHHHHHHHHc-CCC
Q 012321 405 T------LHL-RVQQQNSTALRMAKILEA-HPK 429 (466)
Q Consensus 405 t------l~~-R~e~~~~na~~La~~L~~-~p~ 429 (466)
. +.. ..+.+.++.+.+.+.|.+ .+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 354 (444)
T 3if2_A 322 NDRIKQLSDNEIKPFYQKQATLAVKLLKQALGD 354 (444)
T ss_dssp TSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSS
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 1 111 233455666777777765 343
No 135
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.84 E-value=2.3e-19 Score=187.45 Aligned_cols=224 Identities=14% Similarity=0.112 Sum_probs=154.8
Q ss_pred CCccCCCCchhHHHHHHHHHhhh-CCC-------cEEE--eCCHHHHHHH--HHHHhccCCCEEEEcCCCccchHHHHHh
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALE-GAE-------STVI--MASGMSASTV--MLLALVPAGGHIVTTTDCYRKTRIFIET 268 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~-g~e-------~~v~--~~SG~aAi~~--al~all~pGD~VLv~~~~y~~t~~~~~~ 268 (466)
.+.|. ..+....+++.+++++ |.+ +.++ +++|++|+.+ .+.+++.+||+|++++|+|......+..
T Consensus 87 ~~~Y~--~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~ 164 (448)
T 3meb_A 87 NKEYP--PVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDK 164 (448)
T ss_dssp CCSCC--CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHH
T ss_pred CCCCC--CCcchHHHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHh
Confidence 34454 2334567888888876 643 4555 6677799977 5567788999999999999987665542
Q ss_pred hcccCCcEEEEeCC---C-----CHHHHHHhccC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCC
Q 012321 269 VLPKMGITATVIDP---A-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 269 ~l~~~gi~v~~vd~---~-----D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~ 335 (466)
.++..|.++..++. . |++++++++++ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|
T Consensus 165 ~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay 244 (448)
T 3meb_A 165 VFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAY 244 (448)
T ss_dssp HHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred hHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 23356766665543 2 89999999874 24789999999999999987 456999999999999999998
Q ss_pred CCCCccc------hh----ccC-CcEEEeccccccccccCceEEEE--Ee---------Ch----HHHHHHHHHHHHhCC
Q 012321 336 ATPLNQK------AL----SLG-ADLVLHSATKFIGGHNDVLAGSI--SG---------SG----KLVTQIRNLHHVLGG 389 (466)
Q Consensus 336 a~~~~~~------pl----~~g-aDivv~S~sK~lgG~gdv~gG~v--vg---------~~----eli~~l~~~~~~~G~ 389 (466)
....... .+ ..+ ..+++.|+||.++.+|.. .|++ ++ ++ ++++.++........
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R-iG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 323 (448)
T 3meb_A 245 QGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGER-IGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWS 323 (448)
T ss_dssp TTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGC-CEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred ccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCcccc-ceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccC
Confidence 7543221 11 223 347899999999988754 5665 55 45 556666655444444
Q ss_pred CchHHHHHHHHHhh----------HHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 390 ALNPNAAYLIIRGM----------KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 390 ~ls~~~A~l~lrgL----------~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
..+...++.+...+ +.+....+++.++++.+.+.|+++
T Consensus 324 ~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 324 MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44445444433332 235555667788888999999886
No 136
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.84 E-value=4.8e-20 Score=192.78 Aligned_cols=216 Identities=10% Similarity=0.087 Sum_probs=154.4
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCCE---EEEcCCCccchHHHHHhhcccCCcEE-----EE
Q 012321 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGH---IVTTTDCYRKTRIFIETVLPKMGITA-----TV 279 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all~pGD~---VLv~~~~y~~t~~~~~~~l~~~gi~v-----~~ 279 (466)
+..+++++++++++|++ +.++++++++++.+++.+++++||+ ||++.+.|++....+...++..|+++ ..
T Consensus 111 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~ 190 (465)
T 3e9k_A 111 TGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMI 190 (465)
T ss_dssp GTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEE
T ss_pred HhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEE
Confidence 45678999999999973 5666667779999999999876655 99999999987665555555566552 22
Q ss_pred eC-----CCCHHHHHHhccC--CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEE
Q 012321 280 ID-----PADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLV 351 (466)
Q Consensus 280 vd-----~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDiv 351 (466)
.+ ..|+++|+++|++ .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .....+++|++
T Consensus 191 ~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~ 270 (465)
T 3e9k_A 191 KPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFA 270 (465)
T ss_dssp CCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEE
T ss_pred ecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEE
Confidence 22 2379999999962 2499999999999999999999999999999999999999887654 23335689999
Q ss_pred Eeccccccc-cccCceEEEEEeChHHHHHHHHHHH---------H----------------hCCCchHHHHHHHHHhhHH
Q 012321 352 LHSATKFIG-GHNDVLAGSISGSGKLVTQIRNLHH---------V----------------LGGALNPNAAYLIIRGMKT 405 (466)
Q Consensus 352 v~S~sK~lg-G~gdv~gG~vvg~~eli~~l~~~~~---------~----------------~G~~ls~~~A~l~lrgL~t 405 (466)
+.|++|+++ |++ ..|+++.++++++.+..... . ..++.+......+..+++.
T Consensus 271 ~~s~~K~l~~gp~--~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~ 348 (465)
T 3e9k_A 271 CWCSYKYLNAGAG--GIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEI 348 (465)
T ss_dssp EECSSSTTCCCTT--CCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred EECcccccccCCC--ceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHH
Confidence 999999995 554 23677778877654431100 0 0013333333332333333
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHcC
Q 012321 406 -----LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 406 -----l~~R~e~~~~na~~La~~L~~~ 427 (466)
++...++..++++++.+.|+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 3e9k_A 349 FKQATMKALRKKSVLLTGYLEYLIKHN 375 (465)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445566677788888888874
No 137
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.84 E-value=2.4e-19 Score=183.56 Aligned_cols=209 Identities=13% Similarity=0.117 Sum_probs=164.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al-l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----- 282 (466)
.|...+|++++++++|.++++++++|++|+.+++.++ +++||+|+++.+.|.++...+. ..|+++.+++.
T Consensus 31 g~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~v~~~~~~~ 106 (394)
T 1o69_A 31 GEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPIC----YLKAKPVFIDCDETYN 106 (394)
T ss_dssp THHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHH----HTTCEEEEECBCTTSS
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHH----HcCCEEEEEEeCCCCC
Confidence 4779999999999999988999999999999999999 8999999999999999765443 36778777763
Q ss_pred CCHHHHHHhccCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchh---c-cCCcEEEeccc
Q 012321 283 ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL---S-LGADLVLHSAT 356 (466)
Q Consensus 283 ~D~e~Le~ai~~~--~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl---~-~gaDivv~S~s 356 (466)
.|+++|++++++. ++++|++++ |+|...|+++|.++|+++|+++|+|++|+.+...... . .++|+...|.+
T Consensus 107 ~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~ 183 (394)
T 1o69_A 107 IDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGN 183 (394)
T ss_dssp BCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred cCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCC
Confidence 4899999998752 489999975 7899999999999999999999999999854322111 1 23556666668
Q ss_pred cccccccCceEEEEEeC-hHHHHHHHHHHHHhCC--------------CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 012321 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG--------------ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 357 K~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G~--------------~ls~~~A~l~lrgL~tl~~R~e~~~~na~~La 421 (466)
|.++|.+ +|+++++ ++++++++........ .+++..+.+++..++.++.++++..++++++.
T Consensus 184 K~l~~~~---~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~ 260 (394)
T 1o69_A 184 KIITTSG---GGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYK 260 (394)
T ss_dssp SSSCCSS---CEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred ccCCCCC---ceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888653 7999995 7888888765332100 04556666666667778888899999999999
Q ss_pred HHHHcC
Q 012321 422 KILEAH 427 (466)
Q Consensus 422 ~~L~~~ 427 (466)
+.|++.
T Consensus 261 ~~L~~~ 266 (394)
T 1o69_A 261 EFLGEY 266 (394)
T ss_dssp HHHTTT
T ss_pred HHhccc
Confidence 999875
No 138
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.84 E-value=6.9e-20 Score=187.33 Aligned_cols=218 Identities=16% Similarity=0.179 Sum_probs=156.1
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc------cCCCE-EEEcCCCccchHHHHHhhcccC--CcEE
Q 012321 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV------PAGGH-IVTTTDCYRKTRIFIETVLPKM--GITA 277 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all------~pGD~-VLv~~~~y~~t~~~~~~~l~~~--gi~v 277 (466)
.+..+++++++++++|.+ +.+++++|++++.+++.+++ ++||+ |+++.+.|+.+...+....... |+++
T Consensus 70 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~ 149 (416)
T 1qz9_A 70 RDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTL 149 (416)
T ss_dssp GGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceE
Confidence 367789999999999974 56666777789988888776 89997 5555567776554433322223 8888
Q ss_pred EEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-chhccCCcEEEeccc
Q 012321 278 TVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSAT 356 (466)
Q Consensus 278 ~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~-~pl~~gaDivv~S~s 356 (466)
..++. +++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+... ....+++|+++.|++
T Consensus 150 ~~v~~--~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~ 226 (416)
T 1qz9_A 150 RLVDS--PEELPQAIDQ-DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTY 226 (416)
T ss_dssp EEESS--GGGHHHHCST-TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSS
T ss_pred EEeCc--HHHHHHHhCC-CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCc
Confidence 88876 7899999987 4999999999999999999999999999999999999998754332 222457899999999
Q ss_pred cccccccCceE-EEEEeChHHHHHHHHHH-----------------------HHhCCCchHHHHHHHHHhhH-----HHH
Q 012321 357 KFIGGHNDVLA-GSISGSGKLVTQIRNLH-----------------------HVLGGALNPNAAYLIIRGMK-----TLH 407 (466)
Q Consensus 357 K~lgG~gdv~g-G~vvg~~eli~~l~~~~-----------------------~~~G~~ls~~~A~l~lrgL~-----tl~ 407 (466)
|+++++. .+ |+++++++++++++... ....++.+......+...++ .++
T Consensus 227 K~l~~g~--~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 304 (416)
T 1qz9_A 227 KYLNGGP--GSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMA 304 (416)
T ss_dssp STTCCCT--TCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHH
T ss_pred ccCCCCC--CCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 9985432 24 88888888776554321 01112233333222222222 345
Q ss_pred HHHHHHHHHHHHHHHHHHcC-C--CcE
Q 012321 408 LRVQQQNSTALRMAKILEAH-P--KVK 431 (466)
Q Consensus 408 ~R~e~~~~na~~La~~L~~~-p--~V~ 431 (466)
...++..++++.+.+.|++. | ++.
T Consensus 305 ~~~~~~~~~~~~l~~~L~~~~~~~g~~ 331 (416)
T 1qz9_A 305 SLRRKSLALTDLFIELVEQRCAAHELT 331 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeE
Confidence 56777888889999999875 5 553
No 139
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.84 E-value=1e-19 Score=181.39 Aligned_cols=224 Identities=13% Similarity=0.079 Sum_probs=160.9
Q ss_pred CCccCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEE
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~ 278 (466)
.|.++++..+..+++++++++++|.+ +.+++++|++|+..++.+++++||+|+++++.|++.... ..+...|+++.
T Consensus 40 ~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~--~~~~~~g~~~~ 117 (359)
T 1svv_A 40 TQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEAVIATQLGHISTHET--GAIEATGHKVV 117 (359)
T ss_dssp CCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEETTSHHHHSST--THHHHTTCCEE
T ss_pred hccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhCCCCEEEEcccchHHHHHH--HHHhcCCCeeE
Confidence 46666667889999999999999863 467778888999999999999999999999999885431 02344677777
Q ss_pred EeCCC----CHHHHHHhccCC------CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCC---CCC---C
Q 012321 279 VIDPA----DMEGLEAALNNN------NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTF---ATP---L 339 (466)
Q Consensus 279 ~vd~~----D~e~Le~ai~~~------~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~---a~~---~ 339 (466)
.++.. |+++|+++++++ ++++|++++| ||||.+.+ +++|.++|+++|+++|+|++| ..+ .
T Consensus 118 ~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 196 (359)
T 1svv_A 118 TAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN 196 (359)
T ss_dssp EECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC
T ss_pred EEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc
Confidence 77643 699999998764 2899999999 79999998 889999999999999999998 311 1
Q ss_pred ccchh--ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCC----CchHHHHHHHHHhhHHHHHHHHHH
Q 012321 340 NQKAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG----ALNPNAAYLIIRGMKTLHLRVQQQ 413 (466)
Q Consensus 340 ~~~pl--~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~----~ls~~~A~l~lrgL~tl~~R~e~~ 413 (466)
..... ..+.|+++.|++|+.+ +. ..|+++.+++++++++......+. ......++.....-..+....++.
T Consensus 197 ~~~~~~~~~~~d~~~~s~~K~g~-~~--~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 273 (359)
T 1svv_A 197 DLTLADIARLTDMFYIGATKAGG-MF--GEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHS 273 (359)
T ss_dssp CCCHHHHHHHCSEEEEECTTTTC-SS--CEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHH
T ss_pred chhhhhhhhcCCEEEEecccCCC-CC--ceEEEEEcccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhhHHHHHHHH
Confidence 11211 1357999999999743 32 258899999888777654332232 111222211110112345566777
Q ss_pred HHHHHHHHHHHHcCCCcE
Q 012321 414 NSTALRMAKILEAHPKVK 431 (466)
Q Consensus 414 ~~na~~La~~L~~~p~V~ 431 (466)
.++++.+.+.| +.+++.
T Consensus 274 ~~~~~~l~~~L-~~~~~~ 290 (359)
T 1svv_A 274 NKMAAILKAGL-EACGIR 290 (359)
T ss_dssp HHHHHHHHHHH-HHTTCC
T ss_pred HHHHHHHHHHh-ccCCeE
Confidence 88889999999 556553
No 140
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.83 E-value=2.7e-19 Score=185.80 Aligned_cols=215 Identities=15% Similarity=0.122 Sum_probs=164.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh---------ccCCCEEEEcCCCccchHHHHHhhcccCCcEEE
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~al---------l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~ 278 (466)
..+...++++++++++|.++++++++|++|+.+++.++ +++||+|+++.+.|.++...+ ...|+++.
T Consensus 60 ~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~~ 135 (437)
T 3bb8_A 60 TGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT----IQNGLIPV 135 (437)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH----HHTTCEEE
T ss_pred CChHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHH----HHcCCEEE
Confidence 46789999999999999999999999999999999988 789999999999999876544 34678887
Q ss_pred EeCCC------CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccC--CcE
Q 012321 279 VIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADL 350 (466)
Q Consensus 279 ~vd~~------D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~g--aDi 350 (466)
+++.. |+++|+++++++ +++|++++ ++|...|+++|.++|+++|+++|+|++++.+........| .|+
T Consensus 136 ~v~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~ 211 (437)
T 3bb8_A 136 FVDVDIPTYNVNASLIEAAVSDK-TKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGDI 211 (437)
T ss_dssp ECCEETTTTEECGGGHHHHCCTT-EEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSE
T ss_pred EEeccCccCCcCHHHHHHhcCCC-CeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceECCeecccccCE
Confidence 77532 789999999874 99999963 2345589999999999999999999999865443333345 799
Q ss_pred EEeccccccccccCceEEEEEeChHHHHH-HHHHHHH-------------------------------------hC--CC
Q 012321 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHHV-------------------------------------LG--GA 390 (466)
Q Consensus 351 vv~S~sK~lgG~gdv~gG~vvg~~eli~~-l~~~~~~-------------------------------------~G--~~ 390 (466)
++.|++|..+.++. ++|+++++++.+.. ++..... .| ..
T Consensus 212 ~~~s~~~~k~l~~g-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 290 (437)
T 3bb8_A 212 GTVSFYPAKHITMG-EGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLK 290 (437)
T ss_dssp EEEECSTTSSSCCS-SCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCC
T ss_pred EEEECcCCcCCCCC-CeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccC
Confidence 99998655544432 47999998665443 3322110 01 12
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCcE
Q 012321 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~p~V~ 431 (466)
++++.+.+++..++.+..+++++.++++++.+.|++.+++.
T Consensus 291 ~~~~~aa~~l~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 331 (437)
T 3bb8_A 291 ITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADFI 331 (437)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTTTE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Confidence 35666766677788888888888999999999999887653
No 141
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.83 E-value=1.9e-19 Score=183.53 Aligned_cols=228 Identities=12% Similarity=0.110 Sum_probs=162.4
Q ss_pred CCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc-------cCCCEEEEcCCCccchHHHH-------
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-------PAGGHIVTTTDCYRKTRIFI------- 266 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all-------~pGD~VLv~~~~y~~t~~~~------- 266 (466)
.|.|+++.++..++|++++++++|.++++++++|++|+..++..+. .++|+||+.++.|++.....
T Consensus 69 ~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~ 148 (395)
T 3nx3_A 69 LHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANE 148 (395)
T ss_dssp SCCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCH
T ss_pred cccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCc
Confidence 4566777899999999999999998889999999999999988765 35799999999998743221
Q ss_pred --HhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC--
Q 012321 267 --ETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-- 338 (466)
Q Consensus 267 --~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~-- 338 (466)
...+...+.++..++..|+++|+++++++ +++|+++.++|++|.+.+ +++|.++|++||++||+||+|...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~ 227 (395)
T 3nx3_A 149 KYQKPFKPLISGVKFAKYNDISSVEKLVNEK-TCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGR 227 (395)
T ss_dssp HHHGGGCSCCSCEEEECTTCHHHHHTTCCTT-EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTT
T ss_pred ccccccCCCCCCcEEeCCCCHHHHHHhccCC-eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCc
Confidence 12223344567777778999999999864 999999999999998876 999999999999999999998632
Q ss_pred ----CccchhccCCcEEEeccccccccccCceEEEEEeChHH-HHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHHHH
Q 012321 339 ----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQ 411 (466)
Q Consensus 339 ----~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~el-i~~l~~~~~~~G~~ls~~~A~l~lrgL~tl--~~R~e 411 (466)
..........|++ +++|.+++ | ...|++++++++ ++.++..........+++.+..++..++.+ +..++
T Consensus 228 ~g~~~~~~~~~~~~d~~--t~sK~~~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~ 303 (395)
T 3nx3_A 228 SGKFFAYEHAQILPDIM--TSAKALGC-G-LSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILE 303 (395)
T ss_dssp TSSSSGGGGGTCCCSEE--EECGGGTT-T-SCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred CCcchhHHhcCCCCCEE--EecccccC-C-CceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHH
Confidence 1122222335655 57899986 4 467899999988 777654322222345666666555555543 22344
Q ss_pred HHHHHHHHHHHHH----HcCCCcEEE
Q 012321 412 QQNSTALRMAKIL----EAHPKVKRV 433 (466)
Q Consensus 412 ~~~~na~~La~~L----~~~p~V~~V 433 (466)
+..++.+++.+.| ..+|.+..+
T Consensus 304 ~~~~~~~~~~~~l~~~~~~~~~~~~~ 329 (395)
T 3nx3_A 304 NVNKLTPYLEQSLDELINEFDFCKKR 329 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 4445544444444 445655443
No 142
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.83 E-value=3.1e-19 Score=189.81 Aligned_cols=217 Identities=15% Similarity=0.033 Sum_probs=159.3
Q ss_pred HHHHHHHHhhhCCC-------cEEEeCCHHHHHHHHHHHhccC--------CC-----EEEEcCCCccchHHHHHhhccc
Q 012321 213 VVVEEKMSALEGAE-------STVIMASGMSASTVMLLALVPA--------GG-----HIVTTTDCYRKTRIFIETVLPK 272 (466)
Q Consensus 213 ~~Lee~lA~l~g~e-------~~v~~~SG~aAi~~al~all~p--------GD-----~VLv~~~~y~~t~~~~~~~l~~ 272 (466)
+++++++++++|.+ ..+++++|++|+.+++.++..+ || +|+++.+.|..... .+..
T Consensus 98 ~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~----~~~~ 173 (502)
T 3hbx_A 98 NRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEK----FARY 173 (502)
T ss_dssp HHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHH----HHHH
T ss_pred HHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHH----HHHH
Confidence 35566688888876 3556888999999988887655 77 99999999987543 3445
Q ss_pred CCcEEEEeCC------CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc------CCEEEEeCCCCCCCc
Q 012321 273 MGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATPLN 340 (466)
Q Consensus 273 ~gi~v~~vd~------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~------gillIvD~t~a~~~~ 340 (466)
.|++++.++. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++ |+++++|++|+.+..
T Consensus 174 ~G~~~~~v~~~~~~~~~d~~~l~~~i~~~-t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~ 252 (502)
T 3hbx_A 174 FEVELKEVKLSEGYYVMDPQQAVDMVDEN-TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIA 252 (502)
T ss_dssp TTCEEEEECCBTTBCSCCHHHHHHHCCTT-EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTH
T ss_pred cCceeEEEecCCCcCcCCHHHHHHHHhhC-CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhh
Confidence 6888887763 2899999999885 99999999999999999999999999999 999999999974321
Q ss_pred ---cchh-----ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH-HHHhCCC------------chHHHHHHH
Q 012321 341 ---QKAL-----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-HHVLGGA------------LNPNAAYLI 399 (466)
Q Consensus 341 ---~~pl-----~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~-~~~~G~~------------ls~~~A~l~ 399 (466)
.... ..++|++..|++|++.++.++ |++++.+++++...... ...++.. ......|.+
T Consensus 253 p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~-G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~a 331 (502)
T 3hbx_A 253 PFLYPELEWDFRLPLVKSINVSGHKYGLVYAGI-GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (502)
T ss_dssp HHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSC-EEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHH
T ss_pred hhhCcccccccCCCCceEEEECcccccCCCCCe-EEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHH
Confidence 1111 237899999999999777643 33444455544221110 1111111 133455555
Q ss_pred HH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeC
Q 012321 400 IR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 435 (466)
Q Consensus 400 lr--gL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~ 435 (466)
++ +.+.+..+++++.+++++|.+.|++++.++.+..
T Consensus 332 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (502)
T 3hbx_A 332 LIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSK 369 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 54 5567888999999999999999999998766544
No 143
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.83 E-value=1.8e-19 Score=179.86 Aligned_cols=203 Identities=13% Similarity=0.131 Sum_probs=150.9
Q ss_pred CCchhHHHHHHHHHhhhC---C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC
Q 012321 207 YGNPTTVVVEEKMSALEG---A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g---~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
|+++....+++.++++++ . ++.+++++|++++..++.++ ||+|+++ |.|++.... ++..|.++..++
T Consensus 53 y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~---gd~Vl~~-p~y~~~~~~----~~~~g~~~~~v~ 124 (335)
T 1uu1_A 53 YYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF---DRSVFFP-PTYSCYRIF----AKAVGAKFLEVP 124 (335)
T ss_dssp CCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS---SEEEECS-SSCHHHHHH----HHHHTCEEEECC
T ss_pred CCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh---CCcEEEC-CCcHHHHHH----HHHcCCeEEEec
Confidence 344457899999999998 4 45666667779999998877 8999999 999886543 344577777765
Q ss_pred CC-----CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc---cc-hhccCCcEEE
Q 012321 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QK-ALSLGADLVL 352 (466)
Q Consensus 282 ~~-----D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~---~~-pl~~gaDivv 352 (466)
.. |+++| + ++++|++++|+||||.+.+.++|.++++..| ++|+|++|..... .. ....+.++++
T Consensus 125 ~~~~~~~d~~~l-----~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~ 197 (335)
T 1uu1_A 125 LTKDLRIPEVNV-----G-EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVI 197 (335)
T ss_dssp CCTTSCCCCCCC-----C-TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEE
T ss_pred cCCCCCCCHHHc-----C-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEE
Confidence 32 34433 3 4899999999999999999999999999889 9999999864211 11 1123568999
Q ss_pred eccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL---~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.|+||+++.+| .+.|+++++++++++++.....+ +.++..++.+...+ +.+..+.++..++++.+.+.|+++
T Consensus 198 ~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 272 (335)
T 1uu1_A 198 RTFSKAFSLAA-QRVGYVVASEKFIDAYNRVRLPF--NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_dssp EESTTTTTCGG-GCCEEEEECHHHHHHHHHHSCTT--CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecchhhcCCcc-cCeEEEEeCHHHHHHHHHhcCCC--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999998666 45799999999998887765443 34454444443333 346667777888899999999876
No 144
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.83 E-value=1.2e-19 Score=188.42 Aligned_cols=212 Identities=12% Similarity=0.092 Sum_probs=145.9
Q ss_pred hhHHHHHHHHHhhh----CC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE-------
Q 012321 210 PTTVVVEEKMSALE----GA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT------- 276 (466)
Q Consensus 210 p~~~~Lee~lA~l~----g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~------- 276 (466)
+...+|++++++++ +. ++.++++++++++..+ .+++++||+|++++|+|.+....+.. .|.+
T Consensus 111 ~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g~~g~~~~~~ 185 (449)
T 3qgu_A 111 QGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVM----MGMTGDHNGTG 185 (449)
T ss_dssp TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHH----HTCSCCBCSSS
T ss_pred CCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHH----cCCcccccccc
Confidence 44678999999987 33 4566666666898887 88899999999999999987654432 3433
Q ss_pred ---EEEeCCCCHHHHHHhccC-CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----chh
Q 012321 277 ---ATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL 344 (466)
Q Consensus 277 ---v~~vd~~D~e~Le~ai~~-~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~pl 344 (466)
+..++..+.+.+...+.+ .++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... ...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~ 265 (449)
T 3qgu_A 186 FDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIY 265 (449)
T ss_dssp BTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGG
T ss_pred cceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHh
Confidence 444443221122111211 24899999999999999986 778888899999999999998753221 111
Q ss_pred ----ccCCcEEEeccccccccccCceEEEEEeChHHHH--------HHHHHHHHhCCCchHHHHHHHHHh-----hHHHH
Q 012321 345 ----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT--------QIRNLHHVLGGALNPNAAYLIIRG-----MKTLH 407 (466)
Q Consensus 345 ----~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~--------~l~~~~~~~G~~ls~~~A~l~lrg-----L~tl~ 407 (466)
..+.++++.|+||.++.+| .+.|++++++++++ .+...........++..+..+... .+.+.
T Consensus 266 ~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 344 (449)
T 3qgu_A 266 EIPGADEVAIETCSFSKYAGFTG-VRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMN 344 (449)
T ss_dssp GSTTGGGTEEEEEECSGGGTCTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHH
T ss_pred hccCCCCcEEEEecchhhcCCcc-ceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHH
Confidence 1346799999999998666 35789999887764 344433333334455444433333 34466
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 012321 408 LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 408 ~R~e~~~~na~~La~~L~~~ 427 (466)
.+.+++.++++.+.+.|+++
T Consensus 345 ~~~~~~~~~~~~l~~~L~~~ 364 (449)
T 3qgu_A 345 AMIKFYKENAQILKTTFTEM 364 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHC
Confidence 67778888999999999876
No 145
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.83 E-value=1.7e-19 Score=188.30 Aligned_cols=214 Identities=13% Similarity=-0.039 Sum_probs=155.7
Q ss_pred HHHHHHHHHhhhCCC--c-----EEEeCCHHHHHHHHHHHhcc--------CC-----CEEEEcCCCccchHHHHHhhcc
Q 012321 212 TVVVEEKMSALEGAE--S-----TVIMASGMSASTVMLLALVP--------AG-----GHIVTTTDCYRKTRIFIETVLP 271 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e--~-----~v~~~SG~aAi~~al~all~--------pG-----D~VLv~~~~y~~t~~~~~~~l~ 271 (466)
.+++++++++++|.+ . ++++++|++|+.+++.++.. +| ++|++++ .|..... .+.
T Consensus 83 ~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~----~~~ 157 (452)
T 2dgk_A 83 DLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHK----FAR 157 (452)
T ss_dssp HHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHH----HHH
T ss_pred HHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHH----HHH
Confidence 456677778999874 2 67888888999998887754 55 5999998 7766443 344
Q ss_pred cCCcEEEEeCCC------CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc------CCEEEEeCCCCCCC
Q 012321 272 KMGITATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATPL 339 (466)
Q Consensus 272 ~~gi~v~~vd~~------D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~------gillIvD~t~a~~~ 339 (466)
..|++++.++.. |+++|+++|+++ |++|++++|+||||.+.|+++|.++|+++ |+++++|++|+.+.
T Consensus 158 ~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~-t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~ 236 (452)
T 2dgk_A 158 YWDVELREIPMRPGQLFMDPKRMIEACDEN-TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFL 236 (452)
T ss_dssp HTTCEEEECCCBTTBCSCCHHHHHHHCCTT-EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGT
T ss_pred HcCceEEEEecCCCCCeECHHHHHHHHhhC-CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHH
Confidence 568888887642 799999999875 99999999999999999999999999995 99999999997643
Q ss_pred c---cc--hh---ccCCcEEEeccccccccccCceEEEEEeCh-HHH-HHHHHHHHHhCC----------C--chHHHHH
Q 012321 340 N---QK--AL---SLGADLVLHSATKFIGGHNDVLAGSISGSG-KLV-TQIRNLHHVLGG----------A--LNPNAAY 397 (466)
Q Consensus 340 ~---~~--pl---~~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli-~~l~~~~~~~G~----------~--ls~~~A~ 397 (466)
. .. +. ..++|+++.|+||++.++. ..|+++.++ +++ +.+......++. . ......|
T Consensus 237 ~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 314 (452)
T 2dgk_A 237 APFVAPDIVWDFRLPRVKSISASGHKFGLAPL--GCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQY 314 (452)
T ss_dssp HHHHCTTCCCSTTSTTEEEEEEETTTTTCCCS--SCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHH
T ss_pred HHhhCccchhhcCCCCCcEEEECcccccCCCC--CeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHH
Confidence 2 11 11 2378999999999886654 357777754 333 333211111111 1 1334455
Q ss_pred HHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEE
Q 012321 398 LIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 398 l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~V~~V 433 (466)
.+++ +.+.+..++++..++++++.+.|+++|.++.+
T Consensus 315 aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 352 (452)
T 2dgk_A 315 YEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFI 352 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence 5554 44567788889999999999999999877544
No 146
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.83 E-value=4.6e-19 Score=181.30 Aligned_cols=214 Identities=14% Similarity=0.154 Sum_probs=147.4
Q ss_pred hHHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHhccCCC-----EEEEc-CCCccchHHHHHh--hcccCC
Q 012321 211 TTVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGG-----HIVTT-TDCYRKTRIFIET--VLPKMG 274 (466)
Q Consensus 211 ~~~~Lee~lA~l~----g----~e~~v~~~SG~aAi~~al~all~pGD-----~VLv~-~~~y~~t~~~~~~--~l~~~g 274 (466)
....|++.+++++ | .++.+++++|++|+.+++.+++++|| +|+++ .|.|.+....... .+...+
T Consensus 76 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~ 155 (417)
T 3g7q_A 76 GKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSAR 155 (417)
T ss_dssp SHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECC
T ss_pred CcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhcccc
Confidence 3567777777765 3 25777777888999999999999988 99997 9999875533211 122334
Q ss_pred cEEEEeCC------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----
Q 012321 275 ITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----- 340 (466)
Q Consensus 275 i~v~~vd~------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~----- 340 (466)
..+..++. .|+++|+ +++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.+..
T Consensus 156 ~~~~~~~~~~~~~~~d~~~l~--~~~-~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~ 232 (417)
T 3g7q_A 156 PNIELLPEGQFKYHVDFEHLH--IGE-ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFS 232 (417)
T ss_dssp CEEEEEGGGEEEEECCGGGCC--CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCS
T ss_pred CcccccCCcccccccCHHHhc--ccc-CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccccc
Confidence 45544432 3777777 555 4999999999999999998 88999999999999999999975321
Q ss_pred -cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH------HHH-HHHH
Q 012321 341 -QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHL-RVQQ 412 (466)
Q Consensus 341 -~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t------l~~-R~e~ 412 (466)
..+...+.++++.|+|| ++++| .+.|+++++++++++++......+...+++.+..+...++. +.. ..+.
T Consensus 233 ~~~~~~~~~~i~~~s~sK-~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 310 (417)
T 3g7q_A 233 EARPLWNPNIILCMSLSK-LGLPG-SRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPF 310 (417)
T ss_dssp CCCCCCCTTEEEEEESGG-GTCTT-SCCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHH
T ss_pred ccccCCCCCEEEEEechh-ccCCC-cceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHH
Confidence 11223467899999999 46665 46789999999999998877766654444444433332221 111 2344
Q ss_pred HHHHHHHHHHHHHc-CCC
Q 012321 413 QNSTALRMAKILEA-HPK 429 (466)
Q Consensus 413 ~~~na~~La~~L~~-~p~ 429 (466)
..++.+.+.+.|++ .+.
T Consensus 311 ~~~~~~~~~~~l~~~l~~ 328 (417)
T 3g7q_A 311 YYQRVQQTIAIIRRYLSE 328 (417)
T ss_dssp HHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 56677777777766 343
No 147
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.83 E-value=3.2e-19 Score=182.20 Aligned_cols=207 Identities=17% Similarity=0.140 Sum_probs=142.8
Q ss_pred HHHHHHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHh-hcccCCcEEEEeCC-----CCHH
Q 012321 214 VVEEKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDP-----ADME 286 (466)
Q Consensus 214 ~Lee~lA~l~g~e~~-v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~-~l~~~gi~v~~vd~-----~D~e 286 (466)
.+++++++++|.+.. +++++|++|+.+++.+++++||+|++..+.|++....... .....++.+..++. .|++
T Consensus 75 ~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 154 (417)
T 3n0l_A 75 LAIERCKKLFNCKFANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYE 154 (417)
T ss_dssp HHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHH
T ss_pred HHHHHHHHHhCCCCcceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHH
Confidence 344588999998655 8899999999999999999999999999999875431111 11113344444432 5899
Q ss_pred HHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----cchhccCCcEEEecccccccc
Q 012321 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKFIGG 361 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-----~~pl~~gaDivv~S~sK~lgG 361 (466)
+|++++++.++++|++++|+| |.+.|+++|.++|+++|+++|+|+++..+.. ..++. +.|+++.|+||+|+|
T Consensus 155 ~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~g 231 (417)
T 3n0l_A 155 KVREIAKKEKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVSSTTHKTLRG 231 (417)
T ss_dssp HHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEEEESSTTTCS
T ss_pred HHHHHHHhcCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-cceEEEeeCccccCC
Confidence 999999733489999888776 8899999999999999999999999643322 11222 479999999999976
Q ss_pred ccCceEEEEEeC-hHHHHHHHHHHHHh--CCCchHH-HH-HHHHHh--hHHHHHHHHHHHHHHHHHHHHHHc
Q 012321 362 HNDVLAGSISGS-GKLVTQIRNLHHVL--GGALNPN-AA-YLIIRG--MKTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 362 ~gdv~gG~vvg~-~eli~~l~~~~~~~--G~~ls~~-~A-~l~lrg--L~tl~~R~e~~~~na~~La~~L~~ 426 (466)
+ ++|+++++ +++++.++...... ++..... .+ ..++.. .+.+..+.++..++++.+.+.|++
T Consensus 232 ~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 300 (417)
T 3n0l_A 232 P---RGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD 300 (417)
T ss_dssp C---SCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C---CeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 5 37999998 78888887654422 1212221 11 112222 245667778888899999999987
No 148
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.83 E-value=2.4e-19 Score=184.45 Aligned_cols=211 Identities=11% Similarity=0.104 Sum_probs=149.3
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHHHHHH--HHHHHhcc--C---------CCEEEEcCCCccchHHHHHhhcccCC
Q 012321 210 PTTVVVEEKMSALEGA--ESTVIMASGMSAST--VMLLALVP--A---------GGHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~--~al~all~--p---------GD~VLv~~~~y~~t~~~~~~~l~~~g 274 (466)
+...+|++.++++++. ++.+++++|++++. +++.+++. + ||+|+++.|+|......+ ...|
T Consensus 70 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g 145 (423)
T 3ez1_A 70 AGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLL----QTLG 145 (423)
T ss_dssp TCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHH----HHHT
T ss_pred CChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHH----HHcC
Confidence 3467899999999986 34555555668997 88888887 7 599999999998866544 3346
Q ss_pred cEEEEeCC----CCHHHHHHhcc-CCCceEEEEe-CCCCCCcccccHH---HHHHHH-HhcCCEEEEeCCCCCCCcc---
Q 012321 275 ITATVIDP----ADMEGLEAALN-NNNVSLFFTE-SPTNPFLRCVDVK---LVSDLC-HKKGAIVCIDGTFATPLNQ--- 341 (466)
Q Consensus 275 i~v~~vd~----~D~e~Le~ai~-~~~tklV~le-sPsNPtG~v~dl~---~I~ela-~~~gillIvD~t~a~~~~~--- 341 (466)
.++..++. .|+++|+++++ ..++++|++. +|+||||.+++.+ +|+++| +++|+++|+|++|....+.
T Consensus 146 ~~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~ 225 (423)
T 3ez1_A 146 FELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEED 225 (423)
T ss_dssp CEEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSS
T ss_pred CEEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCC
Confidence 66655542 48999999994 2359999865 8999999999876 888888 8999999999998742111
Q ss_pred -----chh-------ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH----
Q 012321 342 -----KAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---- 405 (466)
Q Consensus 342 -----~pl-------~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t---- 405 (466)
... ..+.++++.|+||+ .++| .+.|++++++++++.++......+...++..++.+...++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 303 (423)
T 3ez1_A 226 RAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAG-AGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGG 303 (423)
T ss_dssp CCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSS-SSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTH
T ss_pred CCCCcchhhhhhccCCCCeEEEEeCchhh-ccCC-cceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccch
Confidence 111 23567999999998 4444 45789999999999998887776666666655544443333
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHc
Q 012321 406 ----LHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 406 ----l~~R~e~~~~na~~La~~L~~ 426 (466)
+....+...++.+.+.+.|.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~l~~ 328 (423)
T 3ez1_A 304 LEGLMRDHAAIIAPKFRAVDEVLRA 328 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222233334455555555543
No 149
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.83 E-value=1.3e-19 Score=184.58 Aligned_cols=216 Identities=15% Similarity=0.120 Sum_probs=156.2
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHH-HHHhhcc---------c
Q 012321 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRI-FIETVLP---------K 272 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~-~~~~~l~---------~ 272 (466)
+..+..++++++++++++ .++++++++|++|+.+++.++. .+||+||+.++.|++... .+. ... .
T Consensus 84 ~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~-~~g~~~~~~~~~p 162 (395)
T 1vef_A 84 LPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLS-VTWEPKYREPFLP 162 (395)
T ss_dssp SCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHH-TCCCHHHHGGGCS
T ss_pred cCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhh-hcCCcccccccCC
Confidence 467889999999999995 4677888889999999998764 689999999999876432 222 111 1
Q ss_pred CCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCC-c-----cc
Q 012321 273 MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL-N-----QK 342 (466)
Q Consensus 273 ~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~-~-----~~ 342 (466)
...++..++..|+++|++++++ ++++|+++.++||||.+.+ +++|.++|+++|+++|+|++|+... . ..
T Consensus 163 ~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~ 241 (395)
T 1vef_A 163 LVEPVEFIPYNDVEALKRAVDE-ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFE 241 (395)
T ss_dssp CSSCEEEECTTCHHHHHHHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHH
T ss_pred CCCCeeEeCCCcHHHHHHHhcc-CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhh
Confidence 1112555666799999999986 4999999877899999888 9999999999999999999988321 1 12
Q ss_pred hhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHHHHH
Q 012321 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRM 420 (466)
Q Consensus 343 pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~L 420 (466)
....+.|++ |++|++++ | .+.|+++++++++++++..........++..++.+...++.+. ...++..++++.+
T Consensus 242 ~~~~~~d~~--s~sK~~~~-g-~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l 317 (395)
T 1vef_A 242 HFGIVPDIL--TLAKALGG-G-VPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWF 317 (395)
T ss_dssp HHTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred hcCCCCCEE--EEcccccC-C-CceEEEEehHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 233457866 78999997 4 3468888888877766542111223345666655555555543 2456677888889
Q ss_pred HHHHHcCC
Q 012321 421 AKILEAHP 428 (466)
Q Consensus 421 a~~L~~~p 428 (466)
.+.|++.+
T Consensus 318 ~~~l~~~~ 325 (395)
T 1vef_A 318 MEKLRAIP 325 (395)
T ss_dssp HHHHHTSC
T ss_pred HHHHHHhh
Confidence 99998764
No 150
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.82 E-value=1.5e-19 Score=186.72 Aligned_cols=215 Identities=11% Similarity=0.072 Sum_probs=150.4
Q ss_pred CCCchh-HHHHHHHHHhhhCCC-cEEEeCCH-HHHH--HHHHHHhccC------------CCEEEEcCCCccchHHHHHh
Q 012321 206 RYGNPT-TVVVEEKMSALEGAE-STVIMASG-MSAS--TVMLLALVPA------------GGHIVTTTDCYRKTRIFIET 268 (466)
Q Consensus 206 R~~~p~-~~~Lee~lA~l~g~e-~~v~~~SG-~aAi--~~al~all~p------------GD~VLv~~~~y~~t~~~~~~ 268 (466)
+|+++. ...|++.++++++.+ +.|++++| ++++ .+++..+.++ +|+|++++|+|.+....+
T Consensus 71 ~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~-- 148 (422)
T 3d6k_A 71 NYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTIT-- 148 (422)
T ss_dssp SSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHH--
T ss_pred CCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHH--
Confidence 344443 678999999999863 44555555 4776 5666777666 348999999999866444
Q ss_pred hcccCCcEEEEeCC----CCHHHHHHhccCCCceEEE-EeCCCCCCcccccHH---HHHHHHH-hcCCEEEEeCCCCC--
Q 012321 269 VLPKMGITATVIDP----ADMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVK---LVSDLCH-KKGAIVCIDGTFAT-- 337 (466)
Q Consensus 269 ~l~~~gi~v~~vd~----~D~e~Le~ai~~~~tklV~-lesPsNPtG~v~dl~---~I~ela~-~~gillIvD~t~a~-- 337 (466)
+..|.++..++. .|+++|++++++.++++|+ +++|+||||.+++.+ +|.++|+ ++|+++|+|++|..
T Consensus 149 --~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~ 226 (422)
T 3d6k_A 149 --EHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHT 226 (422)
T ss_dssp --HHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCB
T ss_pred --HHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccc
Confidence 334666655542 5899999999764589998 689999999999876 7777787 89999999999963
Q ss_pred CCc----cchh--------ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH-
Q 012321 338 PLN----QKAL--------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK- 404 (466)
Q Consensus 338 ~~~----~~pl--------~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~- 404 (466)
... ..++ ..+.++++.|+||+ +++| .+.|++++++++++.++......+.+.+++.++.+...++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G-lriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 304 (422)
T 3d6k_A 227 LSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAG-SGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGD 304 (422)
T ss_dssp SSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred cCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcc-cceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhC
Confidence 111 1122 23567999999998 5565 4579999999999999887776665556655554444332
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHc
Q 012321 405 ------TLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 405 ------tl~~R~e~~~~na~~La~~L~~ 426 (466)
.+....+.+.++.+.+.+.|.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 332 (422)
T 3d6k_A 305 VAGLKAHMLKHAASLAPKFERVLEILDS 332 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333334455566666666654
No 151
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.82 E-value=1.3e-19 Score=186.59 Aligned_cols=215 Identities=14% Similarity=0.127 Sum_probs=142.2
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCccc-------------hHHH
Q 012321 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRK-------------TRIF 265 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all--------~pGD~VLv~~~~y~~-------------t~~~ 265 (466)
.+..+++++++++++|.+ +.+++++|++|+.+++.+++ ++||+|++..|.|.. ....
T Consensus 60 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~ 139 (432)
T 3a9z_A 60 KDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLP 139 (432)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHH
Confidence 345689999999999973 56666677899999998876 589888877777754 2222
Q ss_pred HHhhcccCCcEEEEeCC------CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC----------CEE
Q 012321 266 IETVLPKMGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG----------AIV 329 (466)
Q Consensus 266 ~~~~l~~~gi~v~~vd~------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~g----------ill 329 (466)
+....+..|.++..++. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++| +++
T Consensus 140 ~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~l 218 (432)
T 3a9z_A 140 LEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPT-TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLV 218 (432)
T ss_dssp HHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEE
T ss_pred HHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCC-ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEE
Confidence 33334456888877764 4799999999874 999999999999999999999999999999 999
Q ss_pred EEeCCCCCCCc-cchhccCCcEEEeccccccccccCceEEEEEeChHH-HHHHHHH-------HHHhCCCchHHHHHHHH
Q 012321 330 CIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNL-------HHVLGGALNPNAAYLII 400 (466)
Q Consensus 330 IvD~t~a~~~~-~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~el-i~~l~~~-------~~~~G~~ls~~~A~l~l 400 (466)
|+|++|+.+.. ......+.|+++.|+||++| + ..|++++++++ ..+++.. .....++.+....+.+.
T Consensus 219 ivDea~~~~~~~~~~~~~~~d~~~~s~~K~~g-~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 294 (432)
T 3a9z_A 219 HTDAAQALGKRRVDVEDLGVDFLTIVGHKFYG-P---RIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLG 294 (432)
T ss_dssp EEECTTTTTTSCCCHHHHCCSEEEEEGGGTTC-C---SCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHH
T ss_pred EEEchhhhCCcccChhhcCCCEEEEehhHhcC-C---cceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHH
Confidence 99999976532 22234578999999999875 3 26888888765 2222211 11111233333333332
Q ss_pred HhhHH----HHHHHHHHHHHHHHHHHHHHcCC
Q 012321 401 RGMKT----LHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 401 rgL~t----l~~R~e~~~~na~~La~~L~~~p 428 (466)
..++. ++...++..++++++.+.|++.+
T Consensus 295 aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 326 (432)
T 3a9z_A 295 KAADLVSENCETYEAHMRDIRDYLEERLEAEF 326 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 23332 34455666777888888887753
No 152
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.82 E-value=2.8e-19 Score=188.33 Aligned_cols=212 Identities=18% Similarity=0.208 Sum_probs=157.1
Q ss_pred hhHHHHHHHHHhhhCCCcEEEe-CCHHHHHHHHHHHh----ccCCC-----EEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 210 PTTVVVEEKMSALEGAESTVIM-ASGMSASTVMLLAL----VPAGG-----HIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~v~~-~SG~aAi~~al~al----l~pGD-----~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
...+++++++++++|.+..+++ ++|++|+..+++++ .++|| +|+++.+.|+.+... +...|+++..
T Consensus 107 ~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~----~~~~G~~vv~ 182 (474)
T 1wyu_B 107 RLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPAT----ASMAGYQVRE 182 (474)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHH----HHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHH----HHHCCCEEEE
Confidence 3578889999999998766655 67778888766554 36888 999999999876643 3456888888
Q ss_pred eCCC-----CHHHHHHhccCCCceEEEEeCCCCCCccc-ccHHHHHHHHHhcCCEEEEeCCCCCCC--ccchhccCCcEE
Q 012321 280 IDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLV 351 (466)
Q Consensus 280 vd~~-----D~e~Le~ai~~~~tklV~lesPsNPtG~v-~dl~~I~ela~~~gillIvD~t~a~~~--~~~pl~~gaDiv 351 (466)
++.. |+++|+++++++ +++|++++| ||+|.+ .|+++|.++|+++|+++|+|++|+.+. ..++..+|+|++
T Consensus 183 v~~~~~~~~d~~~L~~~i~~~-t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~ 260 (474)
T 1wyu_B 183 IPSGPEGEVDLEALKRELGPH-VAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVV 260 (474)
T ss_dssp ECBCTTSSBCHHHHHHHCSTT-EEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEE
T ss_pred ecCCCCCCcCHHHHHHhhCCC-ceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEE
Confidence 7753 899999999875 999999998 689998 699999999999999999999986443 234556789999
Q ss_pred Eeccccccccc-c--CceEEEEEeChHHHHHHHH-HH------------------HHhCCCchH---HHHHHHHH--hhH
Q 012321 352 LHSATKFIGGH-N--DVLAGSISGSGKLVTQIRN-LH------------------HVLGGALNP---NAAYLIIR--GMK 404 (466)
Q Consensus 352 v~S~sK~lgG~-g--dv~gG~vvg~~eli~~l~~-~~------------------~~~G~~ls~---~~A~l~lr--gL~ 404 (466)
+.|+||+|+++ | +..+|++++++++++++.. .. .....+.+. ..++..++ +.+
T Consensus 261 ~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~ 340 (474)
T 1wyu_B 261 HLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLE 340 (474)
T ss_dssp ECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHH
Confidence 99999999865 2 2346899999888766541 00 000011222 23333332 345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Q 012321 405 TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+..+.++..++++++.+.|++.
T Consensus 341 ~l~~~~~~~~~~~~~l~~~L~~~ 363 (474)
T 1wyu_B 341 GLKKAAALAVLNARYLKELLKEK 363 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 56667788889999999999886
No 153
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.82 E-value=1.2e-18 Score=178.42 Aligned_cols=215 Identities=14% Similarity=0.096 Sum_probs=149.3
Q ss_pred chhHHHHHHHHHhhh-CC-------CcEEE--eCCHHHHHHHHHH--HhccCC-----CEEEEcCCCccchHHHHHhhcc
Q 012321 209 NPTTVVVEEKMSALE-GA-------ESTVI--MASGMSASTVMLL--ALVPAG-----GHIVTTTDCYRKTRIFIETVLP 271 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~-g~-------e~~v~--~~SG~aAi~~al~--all~pG-----D~VLv~~~~y~~t~~~~~~~l~ 271 (466)
.+....|++.+++++ +. ++.++ +++|++|+.+++. .++.+| |+|+++.|.|++....+ .
T Consensus 73 ~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~----~ 148 (412)
T 1ajs_A 73 ILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVF----T 148 (412)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHH----H
T ss_pred CCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHH----H
Confidence 344678888888877 42 56666 7777799998853 556899 99999999999865433 3
Q ss_pred cCCcE-EEEeCC-------CCHHHHHHhccC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCC
Q 012321 272 KMGIT-ATVIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 272 ~~gi~-v~~vd~-------~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~ 338 (466)
..|.+ +..++. .|+++|++++++ .++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 149 ~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~ 228 (412)
T 1ajs_A 149 TAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGF 228 (412)
T ss_dssp HTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTT
T ss_pred HcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccc
Confidence 35666 555543 278999998864 14789989999999999975 568999999999999999998654
Q ss_pred Ccc----c--hhc----c-CCcEEEeccccccccccCceEEEEEe---ChHH----HHHHHHHHHHhCCCchHHHHHHHH
Q 012321 339 LNQ----K--ALS----L-GADLVLHSATKFIGGHNDVLAGSISG---SGKL----VTQIRNLHHVLGGALNPNAAYLII 400 (466)
Q Consensus 339 ~~~----~--pl~----~-gaDivv~S~sK~lgG~gdv~gG~vvg---~~el----i~~l~~~~~~~G~~ls~~~A~l~l 400 (466)
... . ++. . ..++++.|+||.++++|. +.|++++ ++++ ++.++..........++..++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 307 (412)
T 1ajs_A 229 ASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNE-RVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVA 307 (412)
T ss_dssp TTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHH
T ss_pred cCCcccccchHHHHHhccCCcEEEEEecccccCCCCc-ceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHH
Confidence 321 1 111 1 234889999999998774 5688887 7774 444444332222222343333333
Q ss_pred HhhH----------HHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 401 RGMK----------TLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 401 rgL~----------tl~~R~e~~~~na~~La~~L~~~p 428 (466)
..++ .+....+++.++++.+.+.|++++
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1ajs_A 308 RTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALK 345 (412)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3332 445566677888889999998865
No 154
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.82 E-value=5.6e-19 Score=181.10 Aligned_cols=214 Identities=17% Similarity=0.159 Sum_probs=148.1
Q ss_pred hhHHHHHHHHHhhh-CCC-------cE--EEeCCHHHHHHHH---HHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE
Q 012321 210 PTTVVVEEKMSALE-GAE-------ST--VIMASGMSASTVM---LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 210 p~~~~Lee~lA~l~-g~e-------~~--v~~~SG~aAi~~a---l~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~ 276 (466)
+....|++.+++++ |.+ +. +.+.+|+.++..+ +.+++++||+|++++|+|.+....+ +..|.+
T Consensus 79 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~ 154 (409)
T 4eu1_A 79 TGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIF----AKAGME 154 (409)
T ss_dssp TCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHH----HHTTCE
T ss_pred CCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHH----HHcCCe
Confidence 44567888888865 432 23 3366666777654 4456789999999999999865443 446777
Q ss_pred EEEeCC-------CCHHHHHHhcc--CCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc--
Q 012321 277 ATVIDP-------ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-- 342 (466)
Q Consensus 277 v~~vd~-------~D~e~Le~ai~--~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~-- 342 (466)
+..++. .|+++|+++++ +.+++++++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~ 234 (409)
T 4eu1_A 155 LTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLD 234 (409)
T ss_dssp EEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHH
T ss_pred EEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcc
Confidence 777653 27899999986 224678888999999999987 4559999999999999999987644321
Q ss_pred ----hh----cc-CCcEEEeccccccccccCceEEE---EEeChH----HHHHHHHHHHHhCCCchHHHHHHHHHhh---
Q 012321 343 ----AL----SL-GADLVLHSATKFIGGHNDVLAGS---ISGSGK----LVTQIRNLHHVLGGALNPNAAYLIIRGM--- 403 (466)
Q Consensus 343 ----pl----~~-gaDivv~S~sK~lgG~gdv~gG~---vvg~~e----li~~l~~~~~~~G~~ls~~~A~l~lrgL--- 403 (466)
+. .. ...+++.|+||.++.+|.. .|+ ++++++ +++.++..........+.+.++.+...+
T Consensus 235 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r-iG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 313 (409)
T 4eu1_A 235 YDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHR-CGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDP 313 (409)
T ss_dssp HHTHHHHHHHTTSSCCEEEEECTTTSSCGGGC-CEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCH
T ss_pred cchHHHHHHHhhCCcEEEEecCcccccCccCC-ceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCH
Confidence 11 11 2348899999999988754 566 466777 6666665544333334444444433332
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 404 -------KTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 404 -------~tl~~R~e~~~~na~~La~~L~~~p 428 (466)
+.+..+.+++.++++.+.+.|++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 345 (409)
T 4eu1_A 314 QLTALWKKELKQMSSRIAEVRKRLVSELKACG 345 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2355566777888899999998864
No 155
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.82 E-value=1.4e-18 Score=179.16 Aligned_cols=196 Identities=13% Similarity=0.118 Sum_probs=135.5
Q ss_pred cEEEeCCHHHHHHHH--HHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----C---CHHHHHHhccC--C
Q 012321 227 STVIMASGMSASTVM--LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A---DMEGLEAALNN--N 295 (466)
Q Consensus 227 ~~v~~~SG~aAi~~a--l~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----~---D~e~Le~ai~~--~ 295 (466)
+.+++++|++|+..+ +.+++.+||+|++++|+|.+....+ ...|.++..++. . |+++|++++++ .
T Consensus 119 ~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 194 (420)
T 4f4e_A 119 VTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALF----DMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEP 194 (420)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHH----HHTTCCEEEEECEETTTTEECHHHHHHHHTTCCT
T ss_pred EEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHH----HHcCCeEEEeeeeccccCccCHHHHHHHHHhCCC
Confidence 345555566999988 4567899999999999999865443 345666666543 2 79999999973 2
Q ss_pred CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----ch-----hccCCcEEEeccccccccc
Q 012321 296 NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KA-----LSLGADLVLHSATKFIGGH 362 (466)
Q Consensus 296 ~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~p-----l~~gaDivv~S~sK~lgG~ 362 (466)
++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... .+ ...+.++++.|+||.++.+
T Consensus 195 ~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 274 (420)
T 4f4e_A 195 GTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLY 274 (420)
T ss_dssp TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCG
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCc
Confidence 4899999999999999975 668899999999999999998654321 11 1235679999999999977
Q ss_pred cCceEEEEE---eChHHHHHHH----HHHHHhCCCchHHHHHHH---HHh-------hHHHHHHHHHHHHHHHHHHHHHH
Q 012321 363 NDVLAGSIS---GSGKLVTQIR----NLHHVLGGALNPNAAYLI---IRG-------MKTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 363 gdv~gG~vv---g~~eli~~l~----~~~~~~G~~ls~~~A~l~---lrg-------L~tl~~R~e~~~~na~~La~~L~ 425 (466)
|.. .|+++ .++++++++. ..........+...++.+ +.. .+.+....+++.++++.+.+.|+
T Consensus 275 G~R-iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 353 (420)
T 4f4e_A 275 GER-VGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLK 353 (420)
T ss_dssp GGC-EEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-cEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 754 56654 2566665432 222212222233333322 221 23355666777888999999998
Q ss_pred cC
Q 012321 426 AH 427 (466)
Q Consensus 426 ~~ 427 (466)
++
T Consensus 354 ~~ 355 (420)
T 4f4e_A 354 AA 355 (420)
T ss_dssp HT
T ss_pred hc
Confidence 86
No 156
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.82 E-value=1.4e-18 Score=178.13 Aligned_cols=214 Identities=11% Similarity=0.084 Sum_probs=146.4
Q ss_pred hhHHHHHHHHHhhh-C-------CCcEEE--eCCHHHHHHHH--HHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEE
Q 012321 210 PTTVVVEEKMSALE-G-------AESTVI--MASGMSASTVM--LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (466)
Q Consensus 210 p~~~~Lee~lA~l~-g-------~e~~v~--~~SG~aAi~~a--l~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v 277 (466)
+....|++.+++++ + .++.++ +++|++|+.++ +..++.+||+|+++.|+|.+....+ ...|+++
T Consensus 73 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~ 148 (412)
T 1yaa_A 73 TGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIF----ENQGLKT 148 (412)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHH----HTTTCCE
T ss_pred CCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHH----HHcCceE
Confidence 33567777777766 2 355666 66777999887 3455679999999999999865433 3456666
Q ss_pred EEeCC-------CCHHHHHHhccCC--CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----
Q 012321 278 TVIDP-------ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (466)
Q Consensus 278 ~~vd~-------~D~e~Le~ai~~~--~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~---- 341 (466)
..++. .|+++|++++++. ++.++++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 149 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 228 (412)
T 1yaa_A 149 ATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDK 228 (412)
T ss_dssp EEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHH
T ss_pred EEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccc
Confidence 65543 3789999988653 2455556999999999975 667899999999999999998654221
Q ss_pred c--hh----ccC----CcEEEeccccccccccCceEEEEE--e-----ChH----HHHHHHHHHHHhCCCchHHHHHHHH
Q 012321 342 K--AL----SLG----ADLVLHSATKFIGGHNDVLAGSIS--G-----SGK----LVTQIRNLHHVLGGALNPNAAYLII 400 (466)
Q Consensus 342 ~--pl----~~g----aDivv~S~sK~lgG~gdv~gG~vv--g-----~~e----li~~l~~~~~~~G~~ls~~~A~l~l 400 (466)
. ++ ..+ .++++.|+||.++++|. +.|+++ + +++ ++++++..........+....+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Gl-riG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~ 307 (412)
T 1yaa_A 229 DAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGE-RVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVA 307 (412)
T ss_dssp HTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGG-CEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred hhHHHHHHHhcCCCCcceEEEeccCCCCCCcCC-cceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHH
Confidence 1 11 123 46889999999997674 467877 7 566 7777766443322333444333333
Q ss_pred HhhH----------HHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 401 RGMK----------TLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 401 rgL~----------tl~~R~e~~~~na~~La~~L~~~p 428 (466)
..++ .+....+++.++++.+.+.|++++
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 308 KLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3222 345556677778888888888764
No 157
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.82 E-value=2.3e-19 Score=189.14 Aligned_cols=218 Identities=12% Similarity=0.102 Sum_probs=159.7
Q ss_pred HHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhcc-----CC---CEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 212 TVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP-----AG---GHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e----~~v~~~SG~aAi~~al~all~-----pG---D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
.+++++++++++|.+ ..+++++|++|+.+++.+++. +| |+|+++.+.|.+.... +...|+++..
T Consensus 109 ~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~----~~~~G~~~~~ 184 (497)
T 3mc6_A 109 ESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKA----AYYFGMKLRH 184 (497)
T ss_dssp HHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHH----HHHSCCEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHH----HHHcCCeEEE
Confidence 446667788888865 577788888999999988865 56 8999999999986543 3445888877
Q ss_pred eCC------CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-------------c
Q 012321 280 IDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-------------N 340 (466)
Q Consensus 280 vd~------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-------------~ 340 (466)
++. .|+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. .
T Consensus 185 v~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~ 263 (497)
T 3mc6_A 185 VELDPTTYQVDLGKVKKFINKN-TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPL 263 (497)
T ss_dssp ECBCTTTCSBCTTTTGGGCCSS-EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCC
T ss_pred EecCcccCcCCHHHHHHHHhhC-CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCcc
Confidence 753 3689999999875 9999999999999999999999999999999999999987321 1
Q ss_pred cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-H-HhCC----------Cch--HHHHHHHHHhh--H
Q 012321 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-H-VLGG----------ALN--PNAAYLIIRGM--K 404 (466)
Q Consensus 341 ~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-~-~~G~----------~ls--~~~A~l~lrgL--~ 404 (466)
......|+|+++.|++|++.++. ..|+++.+++.+....... . ..+. ... ...+|.+++.+ .
T Consensus 264 ~~~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~ 341 (497)
T 3mc6_A 264 LDFRVPGVTSISCDTHKYGFAPK--GSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGEN 341 (497)
T ss_dssp CSTTSTTCCEEEEETTTTTCCCS--SCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcEEEECchhhcCCCC--CceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHH
Confidence 23345689999999999986554 3577777766544321110 0 1111 001 33455555544 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCC
Q 012321 405 TLHLRVQQQNSTALRMAKILEA-HPKVKRVHYP 436 (466)
Q Consensus 405 tl~~R~e~~~~na~~La~~L~~-~p~V~~V~~P 436 (466)
.+..++++..++++++.+.|++ .|+++.+..|
T Consensus 342 ~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~ 374 (497)
T 3mc6_A 342 GYIESCQEIVGAAMKFKKYIQENIPDLDIMGNP 374 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 4567788899999999999999 5887654333
No 158
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.82 E-value=1.9e-18 Score=178.92 Aligned_cols=216 Identities=14% Similarity=0.138 Sum_probs=154.0
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHHHHHhhcc-------
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP------- 271 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~-------pG-D~VLv~~~~y~~t~~~~~~~l~------- 271 (466)
+.++...+|+++|+++.|.+++++++||++|+.+++..+.. +| ++||+.++.|++..........
T Consensus 96 ~~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~ 175 (420)
T 2pb2_A 96 FTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG 175 (420)
T ss_dssp SCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTT
T ss_pred cCCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCcccccc
Confidence 56788999999999999988899999999999999988765 77 5999999999774322111111
Q ss_pred --cCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc----cccHHHHHHHHHhcCCEEEEeCCCCCCCc-----
Q 012321 272 --KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR----CVDVKLVSDLCHKKGAIVCIDGTFATPLN----- 340 (466)
Q Consensus 272 --~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~----v~dl~~I~ela~~~gillIvD~t~a~~~~----- 340 (466)
.....+..++..|+++|++++++ ++++|++|+++|++|. ..++++|.++|+++|++||+||+|.....
T Consensus 176 ~~p~~~~~~~~~~~d~~~le~~i~~-~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~ 254 (420)
T 2pb2_A 176 FGPKPADIIHVPFNDLHAVKAVMDD-HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF 254 (420)
T ss_dssp SSSCCSCEEEECTTCHHHHHHHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS
T ss_pred CCCCCCCeEEecCCCHHHHHHHhcc-CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH
Confidence 11123566666799999999987 4999999999888885 24689999999999999999999853211
Q ss_pred -cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHHHHHHHHHH
Q 012321 341 -QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTA 417 (466)
Q Consensus 341 -~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl--~~R~e~~~~na 417 (466)
........|++ |++|++++ | ...|++++++++++.++..........++..+..++..++.+ +...++..+++
T Consensus 255 ~~~~~~~~~dii--t~sK~l~~-G-~~iG~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~ 330 (420)
T 2pb2_A 255 AYMHYGVTPDIL--TSAKALGG-G-FPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKR 330 (420)
T ss_dssp HHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHH
T ss_pred HHHhcCCCCCeE--EecccccC-C-CceEEEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 12223356877 67899994 4 356888888888776654222122234666666665555554 34566677777
Q ss_pred HHHHHHHHcC
Q 012321 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+++.+.|++.
T Consensus 331 ~~l~~~L~~~ 340 (420)
T 2pb2_A 331 QQFVQHLQAI 340 (420)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8887777653
No 159
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.82 E-value=2.1e-18 Score=175.15 Aligned_cols=215 Identities=13% Similarity=0.083 Sum_probs=148.1
Q ss_pred chhHHHHHHHHHhhh---C-----CCcEEE--eCCHHHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhcccCCcE
Q 012321 209 NPTTVVVEEKMSALE---G-----AESTVI--MASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~---g-----~e~~v~--~~SG~aAi~~al~al--l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~ 276 (466)
.+....|++++++++ + .++.++ +++|++|+.+++..+ +.+||+|+++.|+|++....+ ...|.+
T Consensus 68 ~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~ 143 (396)
T 2q7w_A 68 IDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVF----NSAGLE 143 (396)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHH----HHTTCE
T ss_pred CCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHH----HHcCCc
Confidence 344677888888876 2 245555 666779999988665 469999999999999865433 345777
Q ss_pred EEEeCC---C----CHHHHHHhccCC--CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc---
Q 012321 277 ATVIDP---A----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (466)
Q Consensus 277 v~~vd~---~----D~e~Le~ai~~~--~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~--- 341 (466)
+..++. . |+++|++++++. +++++++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 144 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~ 223 (396)
T 2q7w_A 144 VREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEE 223 (396)
T ss_dssp EEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHH
T ss_pred eEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccc
Confidence 666654 2 799999998752 3788999999999999985 568999999999999999998764321
Q ss_pred c--hh----cc-CCcEEEeccccccccccCceEEEEEe---ChH----HHHHHHHHHHHhCCCchHHHHHHHHHhhH---
Q 012321 342 K--AL----SL-GADLVLHSATKFIGGHNDVLAGSISG---SGK----LVTQIRNLHHVLGGALNPNAAYLIIRGMK--- 404 (466)
Q Consensus 342 ~--pl----~~-gaDivv~S~sK~lgG~gdv~gG~vvg---~~e----li~~l~~~~~~~G~~ls~~~A~l~lrgL~--- 404 (466)
. ++ .. ..++++.|+||.++.+|. +.|++++ +++ +++.+...........++..++.+...++
T Consensus 224 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 302 (396)
T 2q7w_A 224 DAEGLRAFAAMHKELIVASSYSXNFGLYNE-RVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDA 302 (396)
T ss_dssp HTHHHHHHHHHCSCEEEEEECTTTTTCGGG-CCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHH
T ss_pred hhHHHHHHHhcCCcEEEEEecccccccccc-ccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChh
Confidence 1 11 12 346889999999987764 4677775 564 44444443322222335554444443332
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 405 -------TLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 405 -------tl~~R~e~~~~na~~La~~L~~~p 428 (466)
.+....+++.++++.+.+.|++++
T Consensus 303 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 333 (396)
T 2q7w_A 303 LRAIWEQELTDMRQRIQRMRQLFVNTLQEKG 333 (396)
T ss_dssp HHHHHHHHHHHC-CHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 334445566778888999998864
No 160
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.81 E-value=4.4e-19 Score=180.61 Aligned_cols=213 Identities=19% Similarity=0.162 Sum_probs=153.2
Q ss_pred CchhHHHHH----HHHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc--EEEEe
Q 012321 208 GNPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVI 280 (466)
Q Consensus 208 ~~p~~~~Le----e~lA~l~g~e~~-v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi--~v~~v 280 (466)
+.+..+.++ +++++++|.+.. +++++|++|+..++.+++++||+|+++++.|++..... ..+...|. ....+
T Consensus 63 g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 141 (407)
T 2dkj_A 63 GCEVIDRVESLAIERAKALFGAAWANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHG-SRVNFSGKLYKVVSY 141 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGT-CTTSHHHHHSEEEEE
T ss_pred CchHHHHHHHHHHHHHHHHhCCCcceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchH-HHHHhcCceEEEEec
Confidence 556544555 489999998655 66899999999999999999999999999998753100 11222232 33333
Q ss_pred C------CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----cchhccCCc
Q 012321 281 D------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGAD 349 (466)
Q Consensus 281 d------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-----~~pl~~gaD 349 (466)
+ ..|+++|++++++.++++|++++|+|| .+.|+++|.++|+++|+++|+|++|+.+.. ..++. ..|
T Consensus 142 ~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~d 218 (407)
T 2dkj_A 142 GVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAH 218 (407)
T ss_dssp CCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCS
T ss_pred CCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc-ccc
Confidence 2 257999999997424899999999997 678999999999999999999999875221 11222 379
Q ss_pred EEEeccccccccccCceEEEEEeC-hHHHHHHHHHHHHhC-CCchHHHH---HHHHHh--hHHHHHHHHHHHHHHHHHHH
Q 012321 350 LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-GALNPNAA---YLIIRG--MKTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 350 ivv~S~sK~lgG~gdv~gG~vvg~-~eli~~l~~~~~~~G-~~ls~~~A---~l~lrg--L~tl~~R~e~~~~na~~La~ 422 (466)
+++.|++|+++|+. +|+++++ ++++++++.....+. +..++... ..+++. .+.++.+.++..++++++.+
T Consensus 219 i~~~s~sK~l~g~~---~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 295 (407)
T 2dkj_A 219 VVTSTTHKTLRGPR---GGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAE 295 (407)
T ss_dssp EEEEESSGGGCCCS---CEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccCCCCC---ceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999998653 6999998 799988877654332 22333211 222222 24456677888889999999
Q ss_pred HHHcC
Q 012321 423 ILEAH 427 (466)
Q Consensus 423 ~L~~~ 427 (466)
.|+++
T Consensus 296 ~L~~~ 300 (407)
T 2dkj_A 296 ELARR 300 (407)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 99887
No 161
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.81 E-value=8e-19 Score=187.09 Aligned_cols=226 Identities=14% Similarity=0.164 Sum_probs=162.3
Q ss_pred CccCCCCchhHHHHHH----HHHhhhCCC----cEEEeCCHHHHHHHHHHHhcc--------------CCCEEEEcCCCc
Q 012321 202 FEYGRYGNPTTVVVEE----KMSALEGAE----STVIMASGMSASTVMLLALVP--------------AGGHIVTTTDCY 259 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee----~lA~l~g~e----~~v~~~SG~aAi~~al~all~--------------pGD~VLv~~~~y 259 (466)
+.|. ..|....+|+ ++++++|.+ ..+++++|++|+..++.++.. +++.|+++...|
T Consensus 125 ~~~~--~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H 202 (511)
T 3vp6_A 125 FTYE--IAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSH 202 (511)
T ss_dssp SCTT--TCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSC
T ss_pred CCcc--cCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCch
Confidence 4444 4566666655 556677764 577888889998888877654 577899999999
Q ss_pred cchHHHHHhhcccCCc---EEEEeCC-----CCHHHHHHhccCCC-----ceEEEEeCCCCCCcccccHHHHHHHHHhcC
Q 012321 260 RKTRIFIETVLPKMGI---TATVIDP-----ADMEGLEAALNNNN-----VSLFFTESPTNPFLRCVDVKLVSDLCHKKG 326 (466)
Q Consensus 260 ~~t~~~~~~~l~~~gi---~v~~vd~-----~D~e~Le~ai~~~~-----tklV~lesPsNPtG~v~dl~~I~ela~~~g 326 (466)
.+....+. ..|+ ++..++. .|+++|+++|++.+ +++|++++|+|++|.+.|+++|+++|+++|
T Consensus 203 ~s~~~~~~----~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~ 278 (511)
T 3vp6_A 203 YSIKKAGA----ALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYN 278 (511)
T ss_dssp THHHHHHH----HTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHT
T ss_pred HHHHHHHH----HcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcC
Confidence 88665442 3344 6666653 38999999996531 789999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCccch-----h--ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH-H------------
Q 012321 327 AIVCIDGTFATPLNQKA-----L--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-V------------ 386 (466)
Q Consensus 327 illIvD~t~a~~~~~~p-----l--~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~-~------------ 386 (466)
+++++|++|+.+....+ + ..++|+++.++||+++++.+. +++++.+++++.++..... .
T Consensus 279 ~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~-g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 357 (511)
T 3vp6_A 279 LWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQC-SAILVKEKGILQGCNQMHASYLFQQDKHYDVSY 357 (511)
T ss_dssp CEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCC-EEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGG
T ss_pred CEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCe-EEEEEeCHHHHHHHhccCCccccCccccccccc
Confidence 99999999987654221 1 135799999999999887532 4444555555555321100 0
Q ss_pred --------hCCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEe
Q 012321 387 --------LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVH 434 (466)
Q Consensus 387 --------~G~~ls~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~ 434 (466)
.+.....+..|.+++ +.+.+..+++++.++++++.+.|+++|+++.+.
T Consensus 358 ~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~ 415 (511)
T 3vp6_A 358 DTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVF 415 (511)
T ss_dssp CCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESS
T ss_pred CccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 011123455555544 567788999999999999999999998876554
No 162
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.81 E-value=8e-19 Score=181.23 Aligned_cols=212 Identities=11% Similarity=0.107 Sum_probs=144.6
Q ss_pred hhHHHHHHHHHhhh----CC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCC---------
Q 012321 210 PTTVVVEEKMSALE----GA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--------- 274 (466)
Q Consensus 210 p~~~~Lee~lA~l~----g~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~g--------- 274 (466)
+....|++.+++++ +. ++.++++++++++.+ +..++++||+|++++|.|.+....+... ...+
T Consensus 98 ~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~ 175 (432)
T 3ei9_A 98 QGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIM-GQTGQFNTDVQKY 175 (432)
T ss_dssp TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHHH-TCSCCEETTTTEE
T ss_pred CCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHHc-CCccccccccccc
Confidence 34578888888875 43 345555555588876 5788899999999999999876555332 2211
Q ss_pred cEEEEeCCCCH----HHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ch
Q 012321 275 ITATVIDPADM----EGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA 343 (466)
Q Consensus 275 i~v~~vd~~D~----e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~p 343 (466)
.++.+++..+. .++++ .+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+..... ..
T Consensus 176 ~~~~~~~~~~~~~~~~~l~~--~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~ 252 (432)
T 3ei9_A 176 GNIEYMRCTPENGFFPDLST--VG-RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSI 252 (432)
T ss_dssp TTCEEEECCGGGTTSCCGGG--CC-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSG
T ss_pred CceEEeccCcccCCcCChhh--CC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCCh
Confidence 13333332211 12222 23 4899999999999999986 667777799999999999998743221 11
Q ss_pred h----ccCCcEEEeccccccccccCceEEEEEeChHH--------HHHHHHHHHHhCCCchHHHHHHHH-----HhhHHH
Q 012321 344 L----SLGADLVLHSATKFIGGHNDVLAGSISGSGKL--------VTQIRNLHHVLGGALNPNAAYLII-----RGMKTL 406 (466)
Q Consensus 344 l----~~gaDivv~S~sK~lgG~gdv~gG~vvg~~el--------i~~l~~~~~~~G~~ls~~~A~l~l-----rgL~tl 406 (466)
. ..+.++++.|+||.++.+|. +.|++++++++ ++.+...........++.....+. .+.+.+
T Consensus 253 ~~~~~~~~~~i~~~S~SK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 331 (432)
T 3ei9_A 253 FEIPGAEEVAMETASFSNYAGFTGV-RLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAM 331 (432)
T ss_dssp GGSTTGGGTEEEEEESHHHHCTTTT-CCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHH
T ss_pred hhcCCCCCeEEEEecchhccCCccc-ceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHH
Confidence 1 12457999999999987763 57899988877 677776655444444554433332 234556
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 012321 407 HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 407 ~~R~e~~~~na~~La~~L~~~ 427 (466)
..+.+++.++++.+.+.|+++
T Consensus 332 ~~~~~~~~~~~~~l~~~L~~~ 352 (432)
T 3ei9_A 332 HKVIGFYKENTNIIIDTFTSL 352 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHC
Confidence 777788889999999999876
No 163
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.81 E-value=1.2e-18 Score=181.26 Aligned_cols=210 Identities=19% Similarity=0.175 Sum_probs=152.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCc-cchHHHHHhhcccCCcEEEEeCC----
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCY-RKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y-~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
.++...+|+++|+++++.++++++++|++|+.+++.+++++|| +++.+.| +.+... +...|.++..++.
T Consensus 73 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~----~~~~G~~~~~v~~~~~~ 146 (456)
T 2ez2_A 73 GSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYH----QEKNGAVFVDIVRDEAH 146 (456)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHH----HHHTTCEEEECBCGGGG
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHH----HHHcCCEEEEecccccc
Confidence 4678899999999999999999999999999999999999999 7778888 543332 3345777666532
Q ss_pred -----------CCHHHHHHhccCCC---ceEEEEeCCCC-CCccccc---HHHHHHHHHhcCCEEEEeCCCCCC------
Q 012321 283 -----------ADMEGLEAALNNNN---VSLFFTESPTN-PFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP------ 338 (466)
Q Consensus 283 -----------~D~e~Le~ai~~~~---tklV~lesPsN-PtG~v~d---l~~I~ela~~~gillIvD~t~a~~------ 338 (466)
.|+++|+++++++. +++|++++|+| |+|.+.+ +++|.++|+++|+++|+|++|+.+
T Consensus 147 ~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~ 226 (456)
T 2ez2_A 147 DAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIK 226 (456)
T ss_dssp CTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEcccccccccccc
Confidence 37899999997641 39999999999 9999887 999999999999999999998752
Q ss_pred -----Cccch-------hccCCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHh-C------CCchHHHHHH
Q 012321 339 -----LNQKA-------LSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVL-G------GALNPNAAYL 398 (466)
Q Consensus 339 -----~~~~p-------l~~gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~-G------~~ls~~~A~l 398 (466)
+...+ .....|+++.|++|+++ .+ ++|++++ +++++++++..+... | .......+ +
T Consensus 227 ~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~-~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~ 302 (456)
T 2ez2_A 227 EQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCL-VN--IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEA-M 302 (456)
T ss_dssp HHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTC-CS--SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHH-H
T ss_pred ccccccCCcchhhhhhhhcccCCEEEEeCcccCC-CC--ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHH-H
Confidence 21121 12346888889888765 43 4799998 688888887655432 1 11112222 1
Q ss_pred HHHhhHHH-HHHHHHHHHHHHHHHHHHHcC
Q 012321 399 IIRGMKTL-HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 399 ~lrgL~tl-~~R~e~~~~na~~La~~L~~~ 427 (466)
++..++.+ ...+++..++.+.+.+.|++.
T Consensus 303 a~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (456)
T 2ez2_A 303 AIGLREAMQYEYIEHRVKQVRYLGDKLKAA 332 (456)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 22222333 355666677788888888763
No 164
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.81 E-value=4e-18 Score=177.79 Aligned_cols=218 Identities=16% Similarity=0.120 Sum_probs=155.8
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc---------cCC-CEEEEcCCCccchHHHHHhhcc-----
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PAG-GHIVTTTDCYRKTRIFIETVLP----- 271 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all---------~pG-D~VLv~~~~y~~t~~~~~~~l~----- 271 (466)
+.++...+|+++|++++|.+.+++++||++|+..++..+. .+| |+||+.++.|++..........
T Consensus 115 ~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~ 194 (439)
T 2oat_A 115 FYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSY 194 (439)
T ss_dssp SEESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcc
Confidence 4577899999999999998888999999999999988764 357 8999999999774322211111
Q ss_pred ----cCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEeCCCCCCCc---
Q 012321 272 ----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (466)
Q Consensus 272 ----~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~----dl~~I~ela~~~gillIvD~t~a~~~~--- 340 (466)
....++..++..|+++|+++++..++++|++|..+|++|.+. ++++|.++|++||++||+||++.....
T Consensus 195 ~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~ 274 (439)
T 2oat_A 195 DGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR 274 (439)
T ss_dssp TTSCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred cCCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc
Confidence 111355667777999999999533589999877777889876 799999999999999999999843111
Q ss_pred ---cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHH
Q 012321 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (466)
Q Consensus 341 ---~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~ 415 (466)
........|++ |++|.+++ |...+|++++++++++.++..........++..+..++..++.+. ...++..+
T Consensus 275 ~~~~~~~~~~~Di~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 351 (439)
T 2oat_A 275 WLAVDYENVRPDIV--LLGKALSG-GLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADK 351 (439)
T ss_dssp SSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred chhHHHhCCCCcEE--EecccccC-CCCCeEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 12222346876 88999997 323579999999888766542211222345666665555555543 34567778
Q ss_pred HHHHHHHHHHcC
Q 012321 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+.+++.+.|++.
T Consensus 352 ~~~~l~~~L~~l 363 (439)
T 2oat_A 352 LGIILRNELMKL 363 (439)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHHHh
Confidence 888888888774
No 165
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.81 E-value=4.1e-19 Score=182.30 Aligned_cols=205 Identities=12% Similarity=0.122 Sum_probs=142.6
Q ss_pred HHHHHHHHhhhC-------CCcEEEeCCHH-HHHHHHHHHhccCCC----EEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 213 VVVEEKMSALEG-------AESTVIMASGM-SASTVMLLALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 213 ~~Lee~lA~l~g-------~e~~v~~~SG~-aAi~~al~all~pGD----~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
..|++.++++++ .++.+++++|+ +++.+++.+++++|| +|++++|+|......+ +..|+++..+
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~----~~~g~~~~~~ 146 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEET----TYVRSGMYKW 146 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHH----HTTCBTTEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHH----HHcCCeEEEe
Confidence 788888888876 23466666666 999999999999999 9999999999866544 3345444433
Q ss_pred CCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchh--ccCCcEEEeccccc
Q 012321 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL--SLGADLVLHSATKF 358 (466)
Q Consensus 281 d~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl--~~gaDivv~S~sK~ 358 (466)
+. |.+.++ .+ ++++|++++|+||||.+++ +|++.++.+++++|+|++|..+. ..++ ..+.+|++.|+||.
T Consensus 147 ~~-d~~~l~---~~-~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~-~~~l~~~~~~~i~~~S~SK~ 218 (391)
T 3bwn_A 147 EG-DAWGFD---KK-GPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPH-YTPITRRQDHDIMLFTFSKI 218 (391)
T ss_dssp EE-ESTTCC---CC-SCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTT-TSCCCCCBCCSEEEEEHHHH
T ss_pred cC-CHHHcC---CC-CCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCC-CCccccCCCCeEEEEechhh
Confidence 32 122222 23 5899999999999999986 55543233349999999987421 1122 34678999999999
Q ss_pred cccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH--------------HHHHHHHHHHHHHHHHHHH
Q 012321 359 IGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK--------------TLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 359 lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~--------------tl~~R~e~~~~na~~La~~ 423 (466)
++.+|. +.|++++ +++++++++..+.....+.+.+.++.+...++ .+....+...++++.+.+.
T Consensus 219 ~g~~Gl-RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 297 (391)
T 3bwn_A 219 TGHAGS-RIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREV 297 (391)
T ss_dssp HSCGGG-CEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcc-ceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 998874 4688886 88999999887764444445554444433333 3445566677888999999
Q ss_pred HHcCCCc
Q 012321 424 LEAHPKV 430 (466)
Q Consensus 424 L~~~p~V 430 (466)
|+++|.+
T Consensus 298 L~~~~~~ 304 (391)
T 3bwn_A 298 VKESDAF 304 (391)
T ss_dssp HHTCSSE
T ss_pred HHhCCCc
Confidence 9998754
No 166
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.81 E-value=7.3e-19 Score=184.32 Aligned_cols=210 Identities=14% Similarity=0.151 Sum_probs=153.6
Q ss_pred hHHHHHHHHHhhhCCCc-EEEeCCHH-HHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 211 TTVVVEEKMSALEGAES-TVIMASGM-SASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~e~-~v~~~SG~-aAi~~al~all~--pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
..+++++++++++|.+. ++++++|+ .++.+++.++.. +|++||++++.|.+.... ++..|+++..++.
T Consensus 134 ~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~----~~~~G~~~~~v~~~~~~ 209 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKA----VSFVGMNMRLVETVLDG 209 (456)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH----HHHTTCEEEEECCEEET
T ss_pred HHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHH----HHHcCCCceEEEEeccC
Confidence 45678999999999864 56666777 566656665543 778899999999885533 3446888776653
Q ss_pred ----CCHHHHHHhc-cC---CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchh---cc--CC
Q 012321 283 ----ADMEGLEAAL-NN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKAL---SL--GA 348 (466)
Q Consensus 283 ----~D~e~Le~ai-~~---~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl---~~--ga 348 (466)
.|+++|+++| ++ .++.+|++++|+||+|.+.|+++|.++|+++|+++++|++|+.... ..+. .+ ++
T Consensus 210 ~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~ 289 (456)
T 2z67_A 210 DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRV 289 (456)
T ss_dssp TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCC
T ss_pred CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCC
Confidence 4899999999 52 2588899999999999999999999999999999999999876543 2121 12 79
Q ss_pred cEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCC--chHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHH
Q 012321 349 DLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA--LNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 349 Divv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~--ls~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~ 423 (466)
|+++.|+||+++++. .+|+++. ++++++++... ..|.. ......|.++. +.+.+..+.++..++++++.+.
T Consensus 290 D~~~~s~hK~~~~p~--g~G~l~~~~~~~~~~l~~~--~~g~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~ 365 (456)
T 2z67_A 290 DAVVSSSDKNLLTPI--GGGLVYSTDAEFIKEISLS--YPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDEL 365 (456)
T ss_dssp SEEEEEHHHHHCCCS--SCEEEEESCHHHHHHHHTT--SCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCcCCCC--CeEEEEEcCHHHHhhcCcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999977664 3688888 57787776322 22321 22334444443 3355677788888999999999
Q ss_pred HHcCC
Q 012321 424 LEAHP 428 (466)
Q Consensus 424 L~~~p 428 (466)
|++.|
T Consensus 366 L~~~~ 370 (456)
T 2z67_A 366 LNDLS 370 (456)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 98874
No 167
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.81 E-value=1.8e-19 Score=183.77 Aligned_cols=214 Identities=14% Similarity=0.117 Sum_probs=152.4
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc------C-CCEEEEcCCCccchHH-HHHhhcccC----C
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP------A-GGHIVTTTDCYRKTRI-FIETVLPKM----G 274 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~------p-GD~VLv~~~~y~~t~~-~~~~~l~~~----g 274 (466)
+.++..++|++++++++|.++++++++|++|+.+++.++.. + +|+|++.++.|++... .+.. .... +
T Consensus 79 ~~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~-~g~~~~~~~ 157 (397)
T 2ord_A 79 FWNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTA-TGQPKYQKP 157 (397)
T ss_dssp SEEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHH-SBCHHHHGG
T ss_pred cCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhc-cCChhhccc
Confidence 45788999999999999988889999999999999988763 5 4789999999976433 2221 1110 0
Q ss_pred -----cEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcc-c---ccHHHHHHHHHhcCCEEEEeCCCCCCCc-cch-
Q 012321 275 -----ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR-C---VDVKLVSDLCHKKGAIVCIDGTFATPLN-QKA- 343 (466)
Q Consensus 275 -----i~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~-v---~dl~~I~ela~~~gillIvD~t~a~~~~-~~p- 343 (466)
..+..++..|+++|++++++ ++++|++++|+||||. + .++++|.++|+++|+++|+|++|..... ..+
T Consensus 158 ~~p~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~ 236 (397)
T 2ord_A 158 FEPLVPGFEYFEFNNVEDLRRKMSE-DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLF 236 (397)
T ss_dssp GCSCCTTEEEECTTCHHHHHHHCCT-TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS
T ss_pred cCCCCCCeeEecCCCHHHHHHHhhc-CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccch
Confidence 11566777799999999986 4999999999999999 4 4689999999999999999999863211 111
Q ss_pred --hccC--CcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHH
Q 012321 344 --LSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTA 417 (466)
Q Consensus 344 --l~~g--aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~na 417 (466)
..++ .|++ |++|++++ | .+.|+++++++++ .++..........++..++.+...++.+. ...++..+++
T Consensus 237 ~~~~~~~~~d~~--s~sK~~~~-G-~r~G~~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 311 (397)
T 2ord_A 237 AYQKYGVVPDVL--TTAKGLGG-G-VPIGAVIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKG 311 (397)
T ss_dssp HHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHH
T ss_pred hhhhhCCCCCee--eeccccCC-C-cCeEEEEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 1223 6866 77899994 3 3568888887776 55432222223446666666665665543 3456677778
Q ss_pred HHHHHHHHcC
Q 012321 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+.+.+.|++.
T Consensus 312 ~~l~~~L~~~ 321 (397)
T 2ord_A 312 NYLMKKLQEM 321 (397)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888777653
No 168
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.81 E-value=2.9e-18 Score=174.78 Aligned_cols=213 Identities=15% Similarity=0.192 Sum_probs=154.6
Q ss_pred hhHHHHHHHHHhhhCCCcEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCC--cEEEEeC-----
Q 012321 210 PTTVVVEEKMSALEGAESTVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVID----- 281 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~v~~-~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~g--i~v~~vd----- 281 (466)
...+++++++++++|.++.+++ +||++|+.+++. ++.+||+||+.++.|.+.. +...+...| .++.+++
T Consensus 35 ~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~g 111 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYR--WTQILEKGKFAKSSTVLTAERTE 111 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHH--HHHHHHHHCCSSEEEEEECEESS
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHH--HHHHHHHhCCCCceEEEeccccc
Confidence 5678889999999998766655 688899998874 4579999999999987743 112233333 3444442
Q ss_pred ---------CCCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCc
Q 012321 282 ---------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGAD 349 (466)
Q Consensus 282 ---------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaD 349 (466)
..|++++++++++.++++|++.+++|++|.+.| +++|.++|+++|+++|+|++++.........+|+|
T Consensus 112 ~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~g~~~~~~~~~~~d 191 (379)
T 3ke3_A 112 DTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIASGCVWLDMKELGID 191 (379)
T ss_dssp CCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTCTTCCCCHHHHTCS
T ss_pred cccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEecccCCccccccccCCC
Confidence 368999999995424899999999999999999 99999999999999999999873233444556899
Q ss_pred EEEeccccccccccCceEEEEEeChHHHHHHHHHH-----------------HHhC-----CCchHHHHHHHHHhhHH--
Q 012321 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----------------HVLG-----GALNPNAAYLIIRGMKT-- 405 (466)
Q Consensus 350 ivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-----------------~~~G-----~~ls~~~A~l~lrgL~t-- 405 (466)
+++.|++|+++++. .+|++++++++++++.... ...| .+.+....+.+...++.
T Consensus 192 ~~~~s~~K~l~~~~--g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~ 269 (379)
T 3ke3_A 192 VLISAPQKGWSSTP--CAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAK 269 (379)
T ss_dssp EEEECTTTTTCSCC--CEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHH
T ss_pred EEEecchhhcCCCC--ceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999998875 3689999999888775310 0011 13344333333233332
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHcC
Q 012321 406 ---LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 406 ---l~~R~e~~~~na~~La~~L~~~ 427 (466)
++.+.++..++++++.+.|++.
T Consensus 270 ~~g~~~~~~~~~~l~~~l~~~l~~~ 294 (379)
T 3ke3_A 270 EIGFDILRDAQWELGNRVRKVLTDK 294 (379)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHc
Confidence 3455667778888888888876
No 169
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.81 E-value=3.6e-18 Score=177.69 Aligned_cols=217 Identities=16% Similarity=0.175 Sum_probs=147.6
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc---------cCC-CEEEEcCCCccchHHHHHhhcc-----
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PAG-GHIVTTTDCYRKTRIFIETVLP----- 271 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all---------~pG-D~VLv~~~~y~~t~~~~~~~l~----- 271 (466)
+.++...+|+++|+++.|.+.+++++||++|+..++..+. .+| |+||+.++.|++..........
T Consensus 104 ~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~ 183 (433)
T 1z7d_A 104 FFSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCT 183 (433)
T ss_dssp SEEHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC------------------
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCcccc
Confidence 4678899999999999998889999999999999988753 367 9999999999874321111111
Q ss_pred ----cCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEeCCCCCCCc---
Q 012321 272 ----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (466)
Q Consensus 272 ----~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~----dl~~I~ela~~~gillIvD~t~a~~~~--- 340 (466)
....++..++..|+++|+++++..++++|++|..+|++|.+. ++++|.++|+++|++||+||++.....
T Consensus 184 ~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~ 263 (433)
T 1z7d_A 184 SNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK 263 (433)
T ss_dssp --------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred ccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc
Confidence 011345566667999999999433589999887777889876 799999999999999999999863211
Q ss_pred ---cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHH
Q 012321 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (466)
Q Consensus 341 ---~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~ 415 (466)
........|++ |++|.+++ |...+|++++++++++.++..........++..+..++..++.+. ...++..+
T Consensus 264 ~~~~~~~~~~~di~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 340 (433)
T 1z7d_A 264 LLCVHHYNVKPDVI--LLGKALSG-GHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEK 340 (433)
T ss_dssp SSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred chhhHhcCCCCCEE--EECccccC-CCCCeEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 12222346776 78899995 323579999999888766532111122345666665555555543 24556667
Q ss_pred HHHHHHHHHHc
Q 012321 416 TALRMAKILEA 426 (466)
Q Consensus 416 na~~La~~L~~ 426 (466)
+.+++.+.|++
T Consensus 341 ~~~~l~~~L~~ 351 (433)
T 1z7d_A 341 LGGPFLENLKR 351 (433)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777777764
No 170
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.80 E-value=5.9e-18 Score=171.89 Aligned_cols=212 Identities=12% Similarity=0.066 Sum_probs=143.8
Q ss_pred HHHHHHHHHhhhC-------C-C--cEEEeCCHHHHHHHHH--HHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 212 TVVVEEKMSALEG-------A-E--STVIMASGMSASTVML--LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 212 ~~~Lee~lA~l~g-------~-e--~~v~~~SG~aAi~~al--~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
...+++.++++++ . + +.+++++|++|+..++ .+++++||+|+++.|+|.+.... ++..|.++..
T Consensus 72 ~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~ 147 (397)
T 3fsl_A 72 LNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAI----FAGAGFEVST 147 (397)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHH----HHHTTCCEEE
T ss_pred hHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHH----HHHcCCceEE
Confidence 4456666666542 2 3 3455555569999884 56689999999999999986543 3446777777
Q ss_pred eCC----C---CHHHHHHhccC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----c
Q 012321 280 IDP----A---DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----K 342 (466)
Q Consensus 280 vd~----~---D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~-----~ 342 (466)
++. . |+++|++++++ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... .
T Consensus 148 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (397)
T 3fsl_A 148 YPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAY 227 (397)
T ss_dssp ECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGH
T ss_pred EeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccH
Confidence 764 2 79999999973 24899999999999999975 558999999999999999998765432 1
Q ss_pred hh-----ccCCcEEEeccccccccccCceEEEEEe---ChHHHHHHHHH-HH---HhCCCchHHHHHH---HHHh-----
Q 012321 343 AL-----SLGADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNL-HH---VLGGALNPNAAYL---IIRG----- 402 (466)
Q Consensus 343 pl-----~~gaDivv~S~sK~lgG~gdv~gG~vvg---~~eli~~l~~~-~~---~~G~~ls~~~A~l---~lrg----- 402 (466)
++ ..+.++++.|+||.++.+|. +.|++++ ++++++++... .. ......+...+.. ++..
T Consensus 228 ~~~~~~~~~~~~i~~~S~SK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 306 (397)
T 3fsl_A 228 AIRAIASAGLPALVSNSFSKIFSLYGE-RVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKA 306 (397)
T ss_dssp HHHHHHHTTCCEEEEEECTTTTTCGGG-CCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHH
T ss_pred HHHHHHhcCCCEEEEecccccccCcCC-CeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHH
Confidence 11 23456999999999987764 4677753 56666554322 11 1111222222222 1221
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 403 --MKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 403 --L~tl~~R~e~~~~na~~La~~L~~~p 428 (466)
.+.+..+.+++.++++.+.+.|++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 334 (397)
T 3fsl_A 307 SWLKEVEEMRTRILAMRQELVKVLSTEM 334 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34456667778888999999998764
No 171
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.80 E-value=1.1e-18 Score=178.12 Aligned_cols=212 Identities=16% Similarity=0.163 Sum_probs=144.6
Q ss_pred hhHHHHHHHHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHh-hcccCCcEEEEe--C---C
Q 012321 210 PTTVVVEEKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVI--D---P 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~-v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~-~l~~~gi~v~~v--d---~ 282 (466)
+..+.+++++++++|.+.. +++++|++|+..++.+++++||+|++..+.|++....... .+...++....+ + .
T Consensus 76 ~~~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 155 (420)
T 3gbx_A 76 VVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGK 155 (420)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCS
T ss_pred HHHHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCC
Confidence 3344556899999998654 5589999999999999999999999999999873311111 111112222222 2 2
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----cchhccCCcEEEecccc
Q 012321 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATK 357 (466)
Q Consensus 283 ~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-----~~pl~~gaDivv~S~sK 357 (466)
.|+++|+++++++++++|++++|+||+ +.|+++|.++|+++|+++|+|+++..+.. ..... ..|+++.|+||
T Consensus 156 ~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK 232 (420)
T 3gbx_A 156 IDYDEMAKLAKEHKPKMIIGGFSAYSG--VVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHK 232 (420)
T ss_dssp CCHHHHHHHHHHHCCSEEEECCTTCCS--CCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSG
T ss_pred cCHHHHHHHHHhcCCeEEEEecCccCC--ccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeeccc
Confidence 689999999976458999999999864 78999999999999999999999754322 22222 37999999999
Q ss_pred ccccccCceEEEEEeCh---HHHHHHHHHHHH--hCCCchHHH--HHHHH-Hh-hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 358 FIGGHNDVLAGSISGSG---KLVTQIRNLHHV--LGGALNPNA--AYLII-RG-MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~~---eli~~l~~~~~~--~G~~ls~~~--A~l~l-rg-L~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
+++|+. ||++++++ ++.+.++..... .+....+.. +..++ .. .+.+..+.++..++++.+.+.|++.
T Consensus 233 ~~~g~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (420)
T 3gbx_A 233 TLAGPR---GGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR 308 (420)
T ss_dssp GGCSCS---CEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCC---ceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc
Confidence 998653 69999987 777777654332 222222221 12222 22 2456677888889999999999873
No 172
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.80 E-value=1.2e-18 Score=181.81 Aligned_cols=205 Identities=20% Similarity=0.173 Sum_probs=150.0
Q ss_pred HHHHhhhCCCcEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHh-hcccCCcEEEEeC------CCCHHHH
Q 012321 217 EKMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVID------PADMEGL 288 (466)
Q Consensus 217 e~lA~l~g~e~~v~-~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~-~l~~~gi~v~~vd------~~D~e~L 288 (466)
+++++++|.+...+ ++||++|+..++.+++++||+|++.++.|++....... .+...+..+..++ ..|+++|
T Consensus 98 ~~la~~~g~~~~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l 177 (447)
T 3h7f_A 98 DRAKALFGAEFANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAV 177 (447)
T ss_dssp HHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHH
T ss_pred HHHHHHcCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHH
Confidence 99999999987777 89999999999999999999999999998772211000 0111123333332 2589999
Q ss_pred HHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC-----CccchhccCCcEEEecccccccccc
Q 012321 289 EAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLVLHSATKFIGGHN 363 (466)
Q Consensus 289 e~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~-----~~~~pl~~gaDivv~S~sK~lgG~g 363 (466)
++++++.++++|++++|+||++. |+++|.++|+++|++||+|+++..+ ....++ .++|+++.|++|+++|+
T Consensus 178 ~~~i~~~~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~l~G~- 253 (447)
T 3h7f_A 178 RATALEFRPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKTLGGG- 253 (447)
T ss_dssp HHHHHHHCCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGGGCCC-
T ss_pred HHHHHhcCCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcCCCCC-
Confidence 99986434899999999998876 9999999999999999999997543 222333 35799999999999875
Q ss_pred CceEEEEEeChHHHHHHHHHHHH--hCCCchHHH--HHHHHHh-h-HHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 364 DVLAGSISGSGKLVTQIRNLHHV--LGGALNPNA--AYLIIRG-M-KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 364 dv~gG~vvg~~eli~~l~~~~~~--~G~~ls~~~--A~l~lrg-L-~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
++|++++++++++.++..... .|+...+.. +..++.. + +.+..+.++..++++++.+.|++.
T Consensus 254 --~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 254 --RSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp --SCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred --CeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 479999999998888765432 233333211 1222222 2 356778888999999999999876
No 173
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.68 E-value=3.3e-21 Score=196.65 Aligned_cols=215 Identities=16% Similarity=0.136 Sum_probs=150.4
Q ss_pred HHHHHHHHHhh----hC----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 212 TVVVEEKMSAL----EG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~lA~l----~g----~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
...+++.++++ +| .++.+++++|++|+.+++.+++++||+|++..+.|.+.... +...|.++..++.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 143 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARS----VRLNNRKLVSNSLK 143 (392)
Confidence 45566666654 34 24455555566999999999999999999999999986543 3344555554432
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----chh----
Q 012321 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL---- 344 (466)
Q Consensus 283 -------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~----~pl---- 344 (466)
.|+++|++++++.++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .++
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (392)
T 3b1d_A 144 EENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVS 223 (392)
Confidence 47888998887335899999999999999975 889999999999999999998754321 011
Q ss_pred c--cCCcEEEeccccccccccCceEEEEEeCh-HHHHHHHHHHHHhC-CCchHHHHHHHHHhh----HHHHHHHHHHHHH
Q 012321 345 S--LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLG-GALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (466)
Q Consensus 345 ~--~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~~~~~G-~~ls~~~A~l~lrgL----~tl~~R~e~~~~n 416 (466)
. .+.++++.|+||.++.+| .+.|++++++ ++++.++.....++ ...++..++.+...+ +.+....++..++
T Consensus 224 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 302 (392)
T 3b1d_A 224 PDFKDFALVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEEN 302 (392)
Confidence 1 345689999999998666 3578888764 58888877665543 123444333333232 3344555666778
Q ss_pred HHHHHHHHHc-CCCcE
Q 012321 417 ALRMAKILEA-HPKVK 431 (466)
Q Consensus 417 a~~La~~L~~-~p~V~ 431 (466)
++.+.+.|++ +|.+.
T Consensus 303 ~~~l~~~l~~~~~~~~ 318 (392)
T 3b1d_A 303 IQFAVEYFAQEAPRLK 318 (392)
Confidence 8888888887 56553
No 174
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.80 E-value=2.8e-18 Score=183.76 Aligned_cols=143 Identities=13% Similarity=0.163 Sum_probs=109.8
Q ss_pred cEEEeCCHHHHHHHHHHH-----hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---------CCHHHHHHhc
Q 012321 227 STVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---------ADMEGLEAAL 292 (466)
Q Consensus 227 ~~v~~~SG~aAi~~al~a-----ll~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---------~D~e~Le~ai 292 (466)
+.+++++|++|+..++.+ ++++||+|+++.|+|.+.. ..+...|.++..++. .|+++|++++
T Consensus 166 ~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l 241 (533)
T 3f6t_A 166 DLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYL----RIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLK 241 (533)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHH----TSGGGGGSEEEEECCCEETTTTSEECHHHHHHHS
T ss_pred eEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHH----HHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHh
Confidence 455555556999999988 7899999999999998854 334445666666653 2799999999
Q ss_pred cCCCceEEEEeCCCCCCcccccHH---HHHHHHH-hcCCEEEEeCCCCCCCcc--ch--hccCCcEEEeccccccccccC
Q 012321 293 NNNNVSLFFTESPTNPFLRCVDVK---LVSDLCH-KKGAIVCIDGTFATPLNQ--KA--LSLGADLVLHSATKFIGGHND 364 (466)
Q Consensus 293 ~~~~tklV~lesPsNPtG~v~dl~---~I~ela~-~~gillIvD~t~a~~~~~--~p--l~~gaDivv~S~sK~lgG~gd 364 (466)
+++ +++|++++|+||||.+++.+ +|+++|+ ++|+++|+|++|+..... .. ...+.++++.|+||.++.+|.
T Consensus 242 ~~~-~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 320 (533)
T 3f6t_A 242 DPS-IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGW 320 (533)
T ss_dssp CTT-EEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGG
T ss_pred CCC-CeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCccc
Confidence 874 99999999999999998765 7888888 689999999998753321 11 122356999999999997774
Q ss_pred ceEEEEEeChH
Q 012321 365 VLAGSISGSGK 375 (466)
Q Consensus 365 v~gG~vvg~~e 375 (466)
+.|+++++++
T Consensus 321 -RiG~l~~~~~ 330 (533)
T 3f6t_A 321 -RLGVIALNEK 330 (533)
T ss_dssp -CEEEEEEESS
T ss_pred -ceEEEEECcH
Confidence 4678887654
No 175
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.80 E-value=2.9e-18 Score=174.26 Aligned_cols=213 Identities=15% Similarity=0.104 Sum_probs=144.5
Q ss_pred hhHHHHHHHHHhhh-CC----CcEEE--eCCHHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 210 PTTVVVEEKMSALE-GA----ESTVI--MASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~lA~l~-g~----e~~v~--~~SG~aAi~~al~all~--pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
.....|++.+++++ +. ++.++ +++|++|+.+++..+.. +||+|+++.|+|.+....+ ...|.++..+
T Consensus 69 ~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~ 144 (394)
T 2ay1_A 69 SGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIM----NFMGLPVQTY 144 (394)
T ss_dssp SCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHH----HHHTCCEEEE
T ss_pred CCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCceEEE
Confidence 33567888888875 42 45666 77777999999877754 9999999999999865443 3346666555
Q ss_pred CC-------CCHHHHHHhccCC--CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-------
Q 012321 281 DP-------ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ------- 341 (466)
Q Consensus 281 d~-------~D~e~Le~ai~~~--~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~------- 341 (466)
+. .|++++++++++. +++++++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 145 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 224 (394)
T 2ay1_A 145 RYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAG 224 (394)
T ss_dssp ECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHH
T ss_pred ecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHH
Confidence 43 2799999998753 3678888999999999986 568899999999999999998764331
Q ss_pred -chh-ccC-CcEEEeccccccccccCceEEEEEe---ChHHHHHHHH----HHHHhCCCchHHHHHHHHHhh--------
Q 012321 342 -KAL-SLG-ADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRN----LHHVLGGALNPNAAYLIIRGM-------- 403 (466)
Q Consensus 342 -~pl-~~g-aDivv~S~sK~lgG~gdv~gG~vvg---~~eli~~l~~----~~~~~G~~ls~~~A~l~lrgL-------- 403 (466)
..+ ..+ .++++.|+||+++.+| .+.|++++ ++++++.+.. .........++..++.+...+
T Consensus 225 ~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~ 303 (394)
T 2ay1_A 225 TRLIASRIPEVLIAASCSKNFGIYR-ERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRAD 303 (394)
T ss_dssp HHHHHHHCSSEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHH
T ss_pred HHHHhhcCCCEEEEEeccCCCcCcC-CccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHH
Confidence 111 123 3478999999998666 35688877 6766544332 222211222333333332222
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 404 --KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 404 --~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
+.+....+++.++++.+.+.|+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (394)
T 2ay1_A 304 WMAELEAVRSGMLRLREQLAGELRDL 329 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 234455566677788888888765
No 176
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.79 E-value=3.1e-18 Score=175.27 Aligned_cols=212 Identities=12% Similarity=0.098 Sum_probs=141.1
Q ss_pred hhHHHHHHHHHhh--hC-C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE-EEEeCCC
Q 012321 210 PTTVVVEEKMSAL--EG-A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-ATVIDPA 283 (466)
Q Consensus 210 p~~~~Lee~lA~l--~g-~--e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~-v~~vd~~ 283 (466)
+....|++.++++ .| . ++.++++++++++..++ .++.+||+|+++.|.|.+....+ ...|.+ +..++..
T Consensus 75 ~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~~-~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~ 149 (400)
T 3asa_A 75 FGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRLL-SFFGPNQTVAIQDPSYPAYLDIA----RLTGAKEIIALPCL 149 (400)
T ss_dssp TCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHHH-HHHCSSCEEEEEESCCHHHHHHH----HHTTCSEEEEEECC
T ss_pred CCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHHH-HHcCCCCEEEECCCCcHHHHHHH----HHcCCcceEecccc
Confidence 4467899999998 56 3 45566666668888754 56689999999999999865433 345666 6665432
Q ss_pred CHHHHHHhccC-CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----cchhcc----CCcE
Q 012321 284 DMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL----GADL 350 (466)
Q Consensus 284 D~e~Le~ai~~-~~tklV~lesPsNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~-----~~pl~~----gaDi 350 (466)
+.+.+...+++ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... .....+ +.++
T Consensus 150 ~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i 229 (400)
T 3asa_A 150 QENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAI 229 (400)
T ss_dssp GGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEE
T ss_pred hhcCcccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceE
Confidence 11111111111 24899999999999999987 56788999999999999999874211 112222 2458
Q ss_pred EEeccccccccccCceEEEEEeChHH-------HHHHHHHHH-HhCCCchHHHHHHHHHhhHH--HHHHHHHHHHHHHHH
Q 012321 351 VLHSATKFIGGHNDVLAGSISGSGKL-------VTQIRNLHH-VLGGALNPNAAYLIIRGMKT--LHLRVQQQNSTALRM 420 (466)
Q Consensus 351 vv~S~sK~lgG~gdv~gG~vvg~~el-------i~~l~~~~~-~~G~~ls~~~A~l~lrgL~t--l~~R~e~~~~na~~L 420 (466)
++.|+||+++.+| .+.|++++++++ ++.+..... ....+.++.....+...++. +....+++.++++.+
T Consensus 230 ~~~s~sK~~g~~G-lriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l 308 (400)
T 3asa_A 230 EINSFSKPLGFAG-IRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLL 308 (400)
T ss_dssp EEEECCGGGTTTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred EEecchhhcCCcc-hheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 9999999998766 457899998887 666643222 21123344433333333332 444556677888889
Q ss_pred HHHHHcC
Q 012321 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|++.
T Consensus 309 ~~~L~~~ 315 (400)
T 3asa_A 309 RKALLAT 315 (400)
T ss_dssp HHHHHHT
T ss_pred HHHHHHC
Confidence 9999875
No 177
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.79 E-value=9.5e-19 Score=185.95 Aligned_cols=221 Identities=17% Similarity=0.155 Sum_probs=138.8
Q ss_pred CCccCCC--CchhHHHHH----HHHHhhhCCCc----E-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHH--HH-
Q 012321 201 SFEYGRY--GNPTTVVVE----EKMSALEGAES----T-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRI--FI- 266 (466)
Q Consensus 201 ~~~Y~R~--~~p~~~~Le----e~lA~l~g~e~----~-v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~--~~- 266 (466)
+|...|+ ++++..+|| +++++++|.+. + ++++||++|+.+++.++++|||+|++.++.|++... .+
T Consensus 85 G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~ 164 (490)
T 2a7v_A 85 GYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMS 164 (490)
T ss_dssp C------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC---------------
T ss_pred CCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhh
Confidence 3444443 456666777 99999999875 4 445699999999999999999999999999876421 10
Q ss_pred H-hhcccCCc--EEEEe--C----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCC
Q 012321 267 E-TVLPKMGI--TATVI--D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 267 ~-~~l~~~gi--~v~~v--d----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~ 337 (466)
. ..+...|. .+..+ + ..|+++|++++.+.++++|+++.++|| .+.|+++|.++|+++|++|++|+++..
T Consensus 165 ~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~ 242 (490)
T 2a7v_A 165 DVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHIS 242 (490)
T ss_dssp ----------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGH
T ss_pred cchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHcCCEEEEcccccc
Confidence 0 01111232 22222 2 358999999986434899999888886 467999999999999999999999643
Q ss_pred -----CCccchhccCCcEEEeccccccccccCceEEEEEeChH---------------HHHHHHHHHHH--hCCCchH-H
Q 012321 338 -----PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------LVTQIRNLHHV--LGGALNP-N 394 (466)
Q Consensus 338 -----~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~e---------------li~~l~~~~~~--~G~~ls~-~ 394 (466)
+....++. ++|+++.|+||+|+|+. ||+++++++ +.++++..... .|+.... .
T Consensus 243 glv~~g~~~~~~~-~aDiv~~S~hK~l~Gp~---GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~i 318 (490)
T 2a7v_A 243 GLVAAKVIPSPFK-HADIVTTTTHKTLRGAR---SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAI 318 (490)
T ss_dssp HHHHTTSSCCGGG-TCSEEEEESSGGGCSCS---CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHH
T ss_pred ccccCCcCCCCCC-CCCEEEECCcccCcccc---chheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHH
Confidence 22334554 69999999999998773 799988763 55666654332 1222222 2
Q ss_pred HHHH-HHH-hh-HHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 395 AAYL-IIR-GM-KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 395 ~A~l-~lr-gL-~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+.. ++. .+ +.++.+.++..+|+++|++.|++.
T Consensus 319 aAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~ 354 (490)
T 2a7v_A 319 AAVAVALKQACTPMFREYSLQVLKNARAMADALLER 354 (490)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 2211 222 22 345677888999999999999986
No 178
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.79 E-value=3.1e-18 Score=189.92 Aligned_cols=218 Identities=12% Similarity=0.038 Sum_probs=158.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
.++...++|+.+|+++|.+.++++++|+ +|+.+++.+++++||+||++.++|.+.+.. .+...|+++.+++.
T Consensus 171 ~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~---~~~l~Ga~~v~v~~~~~~ 247 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS---ALAMAGGRPVYLQTNRNP 247 (730)
T ss_dssp TBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH---HTTTTCCEEEEECEEECT
T ss_pred ChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH---HHHHCCCEEEEEeCCccc
Confidence 4567899999999999999999999998 899999999999999999999999886643 14456777766542
Q ss_pred ------CCHHHH-----HHhccCCC-----c----eEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-
Q 012321 283 ------ADMEGL-----EAALNNNN-----V----SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ- 341 (466)
Q Consensus 283 ------~D~e~L-----e~ai~~~~-----t----klV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~- 341 (466)
.|+++| ++++++++ + ++|++++| |++|.+.|+++|+++|+++|++|++|++|+..+..
T Consensus 248 ~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~ 326 (730)
T 1c4k_A 248 YGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFI 326 (730)
T ss_dssp TCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSS
T ss_pred cCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccC
Confidence 266777 88887631 4 89999999 58999999999999999999999999998753211
Q ss_pred ------chhcc---CCc----EEEeccccccccccCceEEEEEeChHH---------HHHHHHHHHHhC-CCchHHHHH-
Q 012321 342 ------KALSL---GAD----LVLHSATKFIGGHNDVLAGSISGSGKL---------VTQIRNLHHVLG-GALNPNAAY- 397 (466)
Q Consensus 342 ------~pl~~---gaD----ivv~S~sK~lgG~gdv~gG~vvg~~el---------i~~l~~~~~~~G-~~ls~~~A~- 397 (466)
.++.. |+| +++.|+||+++|+. .+|+++.+++. ..+++.....+. +..+.....
T Consensus 327 ~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~--~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaa 404 (730)
T 1c4k_A 327 PMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAA 404 (730)
T ss_dssp GGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHH
T ss_pred cccCCcCcccccccCCCCCCEEEEECCCCCCCCCC--CEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHH
Confidence 23433 788 99999999999875 46777543322 123333332232 222222111
Q ss_pred --HHHHhhH--HHHHHHHHHHHHHHHHHHHHHc-CCCcE
Q 012321 398 --LIIRGMK--TLHLRVQQQNSTALRMAKILEA-HPKVK 431 (466)
Q Consensus 398 --l~lrgL~--tl~~R~e~~~~na~~La~~L~~-~p~V~ 431 (466)
.+.+.++ ....++++..++++.+.+.|++ .++++
T Consensus 405 l~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~ 443 (730)
T 1c4k_A 405 LDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFR 443 (730)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeE
Confidence 1122222 2455778888999999999998 67764
No 179
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.79 E-value=4.2e-18 Score=179.37 Aligned_cols=221 Identities=14% Similarity=0.143 Sum_probs=155.3
Q ss_pred chhHHHHH----HHHHhhhCCCc-----------EEEeCCHHHHHHHHHHHhccC---------CC--------E--EEE
Q 012321 209 NPTTVVVE----EKMSALEGAES-----------TVIMASGMSASTVMLLALVPA---------GG--------H--IVT 254 (466)
Q Consensus 209 ~p~~~~Le----e~lA~l~g~e~-----------~v~~~SG~aAi~~al~all~p---------GD--------~--VLv 254 (466)
.|....+| +++++++|.+. .+++++|++|+..++.++..+ || + |++
T Consensus 108 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~ 187 (486)
T 1js3_A 108 SPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYA 187 (486)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEE
T ss_pred ChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEE
Confidence 35555554 45677778652 688889999998888765321 43 3 778
Q ss_pred cCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCCc------eEEEEeCCCCCCcccccHHHHHHHHH
Q 012321 255 TTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNV------SLFFTESPTNPFLRCVDVKLVSDLCH 323 (466)
Q Consensus 255 ~~~~y~~t~~~~~~~l~~~gi~v~~vd~-----~D~e~Le~ai~~~~t------klV~lesPsNPtG~v~dl~~I~ela~ 323 (466)
+.+.|.+.... +...|++++.++. .|+++|+++|+++ + .+|++++|+||+|.+.|+++|+++|+
T Consensus 188 s~~~h~s~~~~----~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~-~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~ 262 (486)
T 1js3_A 188 SDQAHSSVERA----GLIGGVKLKAIPSDGKFAMRASALQEALERD-KAAGLIPFFVVATLGTTSCCSFDNLLEVGPICH 262 (486)
T ss_dssp ETTCCHHHHHH----HHHHTCEEEEECCCTTSCCCHHHHHHHHHHH-HHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred CCCCcHHHHHH----HHhCCCceEEeecCCCCCCCHHHHHHHHHHH-HhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 99999875543 3345788877764 4899999999764 5 38999999999999999999999999
Q ss_pred hcCCEEEEeCCCCCCCccch-h------ccCCcEEEeccccccccccCceEEEEEeC-hHH-HHHHHH---HHHH-----
Q 012321 324 KKGAIVCIDGTFATPLNQKA-L------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKL-VTQIRN---LHHV----- 386 (466)
Q Consensus 324 ~~gillIvD~t~a~~~~~~p-l------~~gaDivv~S~sK~lgG~gdv~gG~vvg~-~el-i~~l~~---~~~~----- 386 (466)
++|+++++|++|+.+....+ . -.++|+++.++||+++++. ..|+++.+ +++ .+.+.. +...
T Consensus 263 ~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~--~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 340 (486)
T 1js3_A 263 EEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNF--DCSAMWVKRRTDLTGAFKLDPVYLKHSHQGS 340 (486)
T ss_dssp HTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCS--SCEEEEESCHHHHHGGGC------------C
T ss_pred HcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCc--ceEEEEEeCHHHHHHHhcCCchhhCCCcccc
Confidence 99999999999986543211 1 1268999999999999764 35777665 443 333311 1100
Q ss_pred ------------hCCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCC
Q 012321 387 ------------LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 387 ------------~G~~ls~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~V~~V~~P 436 (466)
.+........|.+++ +.+.+..++++..++++++.+.|++.|+++.+..|
T Consensus 341 ~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 404 (486)
T 1js3_A 341 GLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEV 404 (486)
T ss_dssp CSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCC
T ss_pred cCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC
Confidence 111223455555544 55678888899999999999999999887654333
No 180
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.79 E-value=8.7e-18 Score=171.73 Aligned_cols=210 Identities=17% Similarity=0.180 Sum_probs=140.4
Q ss_pred HHHHHHHHHhhhCCCcEE-EeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHH-HHHhhcccCCcEEEEeC------CC
Q 012321 212 TVVVEEKMSALEGAESTV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRI-FIETVLPKMGITATVID------PA 283 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e~~v-~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~-~~~~~l~~~gi~v~~vd------~~ 283 (466)
.+..++++++++|.+... ++++|++|+..++.+++++||+|++..+.|++... .........++....++ ..
T Consensus 80 ~~~a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 159 (425)
T 3ecd_A 80 EALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLI 159 (425)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSC
T ss_pred HHHHHHHHHHHhCCCCceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCcc
Confidence 333458889999987764 48999999999999999999999999999987321 11111122233444444 23
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-----ccchhccCCcEEEeccccc
Q 012321 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKALSLGADLVLHSATKF 358 (466)
Q Consensus 284 D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-----~~~pl~~gaDivv~S~sK~ 358 (466)
|+++|++++++.++++|++++|+|| ...++++|.++|+++|+++|+|+++..+. ...++. .+|+++.|+||+
T Consensus 160 d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~-~~di~~~s~sK~ 236 (425)
T 3ecd_A 160 DYDQVEALAQQHKPSLIIAGFSAYP--RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVE-HAHVVTSTTHKT 236 (425)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSCCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEESSGG
T ss_pred CHHHHHHHHhhcCCcEEEEccccCC--CcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchh-cCcEEEecCCcc
Confidence 8999999997434899999999985 57899999999999999999999954322 122333 379999999999
Q ss_pred cccccCceEEEEEeC-hHHHHHHHHHHHHh--CCCchHHHH--HHHH-Hh-hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 359 IGGHNDVLAGSISGS-GKLVTQIRNLHHVL--GGALNPNAA--YLII-RG-MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 359 lgG~gdv~gG~vvg~-~eli~~l~~~~~~~--G~~ls~~~A--~l~l-rg-L~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
++|+ ++|+++++ +++.+.++...... +....+..+ ..++ .. .+.+....++..++++.+.+.|++.
T Consensus 237 l~g~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (425)
T 3ecd_A 237 LRGP---RGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG 309 (425)
T ss_dssp GCCC---SCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCC---CcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9765 37999887 56777666543321 122222222 2222 22 2455677788888999999999874
No 181
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.79 E-value=4.8e-18 Score=176.89 Aligned_cols=212 Identities=16% Similarity=0.165 Sum_probs=148.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc----CCCE---EEEcCCCccchHHHHHhhcccCCcEEEEe
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP----AGGH---IVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~----pGD~---VLv~~~~y~~t~~~~~~~l~~~gi~v~~v 280 (466)
..+...+|+++++++++.++++++++|++|+.+++.+++. +||+ |+++.+.|+.+...+ ...|.++..+
T Consensus 74 ~~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~----~~~g~~~~~~ 149 (467)
T 1ax4_A 74 GSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHV----ELNGCKAINI 149 (467)
T ss_dssp SCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHH----HHTTCEEEEC
T ss_pred cCccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHH----hccCCceecc
Confidence 3567889999999999999899999999999999999988 9999 998855445434333 2234444332
Q ss_pred C---------------CCCHHHHHHhccC---CCceEEEEeCCCCCC-ccccc---HHHHHHHHHhcCCEEEEeCCCCC-
Q 012321 281 D---------------PADMEGLEAALNN---NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT- 337 (466)
Q Consensus 281 d---------------~~D~e~Le~ai~~---~~tklV~lesPsNPt-G~v~d---l~~I~ela~~~gillIvD~t~a~- 337 (466)
+ ..|+++|++++++ .++++|++++|+||+ |.+.+ +++|.++|++||++||+|+++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~ 229 (467)
T 1ax4_A 150 VTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCE 229 (467)
T ss_dssp BCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHH
T ss_pred cccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhh
Confidence 1 2489999999974 148999999999999 78765 67999999999999999998542
Q ss_pred ----------CCc-cchhc------cCCcEEEeccccccccccCceEEEEEeC-h-HHHHHHHHHHHHhCC-----CchH
Q 012321 338 ----------PLN-QKALS------LGADLVLHSATKFIGGHNDVLAGSISGS-G-KLVTQIRNLHHVLGG-----ALNP 393 (466)
Q Consensus 338 ----------~~~-~~pl~------~gaDivv~S~sK~lgG~gdv~gG~vvg~-~-eli~~l~~~~~~~G~-----~ls~ 393 (466)
... ..... ..+|+++.|+||+++.+ +||+++++ + +++++++.....+++ ..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (467)
T 1ax4_A 230 NAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLN---IGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAG 306 (467)
T ss_dssp HHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCS---SCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCH
T ss_pred cchhccccccccCCCchhhhhhhhccccceEEEeccccCCCC---cceEEEeCCHHHHHHHHHhhccccccccccCCccc
Confidence 111 11111 24789999999999865 46888887 7 888887765543221 1122
Q ss_pred HHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHc
Q 012321 394 NAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 394 ~~A~l~lrgL~tl--~~R~e~~~~na~~La~~L~~ 426 (466)
.....+..+++.+ ..++++..++++.+.+.|++
T Consensus 307 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 341 (467)
T 1ax4_A 307 RDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLRE 341 (467)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 1111111123322 22555666788889999987
No 182
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.78 E-value=8.6e-18 Score=178.78 Aligned_cols=218 Identities=17% Similarity=0.188 Sum_probs=155.7
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc-------c-CCC------EEEEcCCCccchHHHHHhhcccCCc
Q 012321 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV-------P-AGG------HIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e--~~v~~~SG~aAi~~al~all-------~-pGD------~VLv~~~~y~~t~~~~~~~l~~~gi 275 (466)
..++++++++++|.+ ..+++++|++|+..++.++. + +|| +|+++...|.+....+.. +. .|.
T Consensus 150 e~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~-~g-~g~ 227 (515)
T 2jis_A 150 EEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAF-LG-LGT 227 (515)
T ss_dssp HHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHH-TT-SCG
T ss_pred HHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHH-cC-CCC
Confidence 456677899999974 67778888899888887763 2 576 899999999887654432 21 132
Q ss_pred -EEEEeCC-----CCHHHHHHhccCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccch-
Q 012321 276 -TATVIDP-----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA- 343 (466)
Q Consensus 276 -~v~~vd~-----~D~e~Le~ai~~~-----~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~p- 343 (466)
++..++. .|+++|+++|++. ++++|++++|+|++|.+.|+++|.++|+++|+++|+|++|+.+....+
T Consensus 228 ~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~ 307 (515)
T 2jis_A 228 DSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQT 307 (515)
T ss_dssp GGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTT
T ss_pred CcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChh
Confidence 6666654 3899999998651 389999999999999999999999999999999999999886544322
Q ss_pred ----hc--cCCcEEEeccccccccccCceEEEEEeChH--HHHHHH----HHHHH-----------------hCCCchHH
Q 012321 344 ----LS--LGADLVLHSATKFIGGHNDVLAGSISGSGK--LVTQIR----NLHHV-----------------LGGALNPN 394 (466)
Q Consensus 344 ----l~--~gaDivv~S~sK~lgG~gdv~gG~vvg~~e--li~~l~----~~~~~-----------------~G~~ls~~ 394 (466)
+. .++|+++.|+||+++++.+ .|+++.+++ ++++.. .+... .+.....+
T Consensus 308 ~~~~~~g~~~aD~v~~s~hK~l~~p~g--~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al 385 (515)
T 2jis_A 308 HRHLLDGIQRADSVAWNPHKLLAAGLQ--CSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCL 385 (515)
T ss_dssp TGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHH
T ss_pred hHhhcCCCccCCEEEECcccccCCCCC--eeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHH
Confidence 22 2689999999999987753 477776654 655421 11100 00112244
Q ss_pred HHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEE
Q 012321 395 AAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 395 ~A~l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~V~~V 433 (466)
..|.+++ +.+.+...+++..++++++.+.|++.|+++.+
T Consensus 386 ~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 426 (515)
T 2jis_A 386 KLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELV 426 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 5555444 33456677888899999999999998876543
No 183
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.78 E-value=5.6e-18 Score=179.49 Aligned_cols=217 Identities=13% Similarity=0.120 Sum_probs=155.4
Q ss_pred HHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhcc--------CC-----C-EEEEcCCCccchHHHHHhhcccCC
Q 012321 213 VVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP--------AG-----G-HIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 213 ~~Lee~lA~l~g~e----~~v~~~SG~aAi~~al~all~--------pG-----D-~VLv~~~~y~~t~~~~~~~l~~~g 274 (466)
+++.+++++++|.+ ..+++++|++|+..++.++.. +| + +|+++.+.|.+....+.. +. .|
T Consensus 135 ~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~-~g-~g 212 (504)
T 2okj_A 135 QITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAA-LG-FG 212 (504)
T ss_dssp HHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHH-TT-SC
T ss_pred HHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHH-cC-CC
Confidence 34446668888864 567778888999998887742 57 6 799999999886654432 21 23
Q ss_pred c-EEEEeCCC-----CHHHHHHhccCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc--
Q 012321 275 I-TATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (466)
Q Consensus 275 i-~v~~vd~~-----D~e~Le~ai~~~-----~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~-- 341 (466)
. ++..++.. |+++|+++|++. ++++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.+...
T Consensus 213 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~ 292 (504)
T 2okj_A 213 TDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSR 292 (504)
T ss_dssp GGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCT
T ss_pred cccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCH
Confidence 3 66666543 899999998651 3899999999999999999999999999999999999998765432
Q ss_pred ---chhc--cCCcEEEeccccccccccCceEEEEEeCh-HHHHHHHHH-HHHh-CC-------------------CchHH
Q 012321 342 ---KALS--LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNL-HHVL-GG-------------------ALNPN 394 (466)
Q Consensus 342 ---~pl~--~gaDivv~S~sK~lgG~gdv~gG~vvg~~-eli~~l~~~-~~~~-G~-------------------~ls~~ 394 (466)
..+. .++|+++.++||+++++. ..|+++.++ ++++..... ...+ +. .....
T Consensus 293 ~~~~~~~g~~~~D~i~~~~hK~~~~p~--~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l 370 (504)
T 2okj_A 293 KHRHKLNGIERANSVTWNPHKMMGVLL--QCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIF 370 (504)
T ss_dssp TTGGGGTTGGGCSEEEECTTSTTCCCS--CCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHH
T ss_pred hhHhhcCCcccCCEEEECchhhcCCCc--ceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHH
Confidence 1222 268999999999999775 357777665 565542211 1111 10 11245
Q ss_pred HHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHcCCCcEEE
Q 012321 395 AAYLIIRG--MKTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 395 ~A~l~lrg--L~tl~~R~e~~~~na~~La~~L~~~p~V~~V 433 (466)
..|.+++. .+.+..++++..++++++.+.|+++|+++.+
T Consensus 371 ~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 411 (504)
T 2okj_A 371 KFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMV 411 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEES
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 55555443 3556777888999999999999998877543
No 184
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.78 E-value=7.1e-18 Score=178.35 Aligned_cols=211 Identities=16% Similarity=0.118 Sum_probs=148.4
Q ss_pred HHHHHHHhhhCCC-----cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHh----hcccCC--cEEEEe--
Q 012321 214 VVEEKMSALEGAE-----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET----VLPKMG--ITATVI-- 280 (466)
Q Consensus 214 ~Lee~lA~l~g~e-----~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~----~l~~~g--i~v~~v-- 280 (466)
.+++++++++|.+ ..|+++||++|+.+++.++++|||+|++.++.|++....... .....| +....+
T Consensus 94 ~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~ 173 (483)
T 1rv3_A 94 LCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKV 173 (483)
T ss_dssp HHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECB
T ss_pred HHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcc
Confidence 4448999999985 348999999999888999999999999999999875421100 011112 333333
Q ss_pred C----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC-----CccchhccCCcEE
Q 012321 281 D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLV 351 (466)
Q Consensus 281 d----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~-----~~~~pl~~gaDiv 351 (466)
+ ..|+++|++++++.+||+|++ +++|++ .+.|+++|.++|+++|++||+|+++..+ ....++. ++|++
T Consensus 174 ~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-~~div 250 (483)
T 1rv3_A 174 NPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-HCHVV 250 (483)
T ss_dssp CTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-TCSEE
T ss_pred ccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-CCcEE
Confidence 3 258999999998335999999 999999 8999999999999999999999997643 2223333 68999
Q ss_pred EeccccccccccCceEEEEEeChH---------------HHHHHHHHHHH--hCCCchH-HHHH-HHHHhh--HHHHHHH
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGK---------------LVTQIRNLHHV--LGGALNP-NAAY-LIIRGM--KTLHLRV 410 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~e---------------li~~l~~~~~~--~G~~ls~-~~A~-l~lrgL--~tl~~R~ 410 (466)
+.|+||+|+|+. +|+++++++ +.+++...... .|+.... ..+. .++..+ ..++.+.
T Consensus 251 ~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~ 327 (483)
T 1rv3_A 251 TTTTHKTLRGCR---AGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQ 327 (483)
T ss_dssp EEESSGGGCCCS---CEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred EecCcccCCCCC---ceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHH
Confidence 999999998763 699988764 33444332111 2222222 2221 122222 3567778
Q ss_pred HHHHHHHHHHHHHHHcCCCcE
Q 012321 411 QQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 411 e~~~~na~~La~~L~~~p~V~ 431 (466)
++..++++.+++.|+++ ++.
T Consensus 328 ~~~~~~~~~l~~~L~~~-g~~ 347 (483)
T 1rv3_A 328 RQVVANCRALSAALVEL-GYK 347 (483)
T ss_dssp HHHHHHHHHHHHHHHHT-TCE
T ss_pred HHHHHHHHHHHHHHHhc-CCE
Confidence 88899999999999987 443
No 185
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.77 E-value=9.3e-18 Score=173.79 Aligned_cols=226 Identities=13% Similarity=0.074 Sum_probs=153.2
Q ss_pred CCccCCCCchhHHHHHHHHHhhh--CC-CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhccc---
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALE--GA-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPK--- 272 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~--g~-e~~v~~~SG~aAi~~al~al--l~pGD~VLv~~~~y~~t~~~~~~~l~~--- 272 (466)
.|.+.++.++...+|+++|++++ +. ++++++++|++|+..++..+ ..++++||+.++.|++...........
T Consensus 77 ~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 156 (439)
T 3dxv_A 77 GATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQ 156 (439)
T ss_dssp CSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC------
T ss_pred CccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCch
Confidence 35567778899999999999998 44 57888899999999999875 346788999898887644322111100
Q ss_pred --------CCcEEEEeCCC----------CHHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCC
Q 012321 273 --------MGITATVIDPA----------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGA 327 (466)
Q Consensus 273 --------~gi~v~~vd~~----------D~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gi 327 (466)
....+..++.. |+++|+++++ +.++++|+++.++|++|.+.+ +++|.++|++||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~ 236 (439)
T 3dxv_A 157 ADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGI 236 (439)
T ss_dssp -------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTC
T ss_pred hhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 00011222222 5899999983 335899999999999999988 9999999999999
Q ss_pred EEEEeCCCCCCC------ccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 012321 328 IVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR 401 (466)
Q Consensus 328 llIvD~t~a~~~------~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lr 401 (466)
+||+||+|.... .........|++ |++|.+++ |. +.|++++++++++.++........ .++..+..++.
T Consensus 237 ~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G~-riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~a 311 (439)
T 3dxv_A 237 LVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLGG-GL-PLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLA 311 (439)
T ss_dssp EEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGGT-TS-CCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHH
T ss_pred EEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchhcC-Cc-ceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHH
Confidence 999999986321 112222345666 88999996 54 679999999988876644222223 45665555555
Q ss_pred hhHHH--HHHHHHHHHHHHHHHHHHHc----CCCcE
Q 012321 402 GMKTL--HLRVQQQNSTALRMAKILEA----HPKVK 431 (466)
Q Consensus 402 gL~tl--~~R~e~~~~na~~La~~L~~----~p~V~ 431 (466)
.++.+ +..+++..++.+++.+.|++ +|.+.
T Consensus 312 al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 347 (439)
T 3dxv_A 312 VLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIG 347 (439)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 55433 22355556666666555544 56544
No 186
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.77 E-value=6.2e-18 Score=171.95 Aligned_cols=214 Identities=17% Similarity=0.145 Sum_probs=149.4
Q ss_pred CchhHHHHH----HHHHhhhCCCcEE-EeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCC--cEEEEe
Q 012321 208 GNPTTVVVE----EKMSALEGAESTV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVI 280 (466)
Q Consensus 208 ~~p~~~~Le----e~lA~l~g~e~~v-~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~g--i~v~~v 280 (466)
+++....++ +++++++|.+... ++++|++|+.+++.+++++||+|+++.+.|+.+..... .+...| +++..+
T Consensus 63 ~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 141 (405)
T 2vi8_A 63 GCEYVDIVEELARERAKQLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS-PVNFSGVQYNFVAY 141 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTC-TTSHHHHHSEEEEE
T ss_pred cchHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccc-hhhhccceeEEEec
Confidence 345556665 6999999987654 46899999999999999999999999999987532100 001112 244444
Q ss_pred C------CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc---cchhc-cCCcE
Q 012321 281 D------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QKALS-LGADL 350 (466)
Q Consensus 281 d------~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~---~~pl~-~gaDi 350 (466)
+ ..|+++|++++++.++++|++ +|+|. |...|+++|.++|+++|+++|+|++|+.+.. ..+.. .+.|+
T Consensus 142 ~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di 219 (405)
T 2vi8_A 142 GVDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHF 219 (405)
T ss_dssp CBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSE
T ss_pred ccccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-CccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCE
Confidence 3 248999999997523889888 56554 5677899999999999999999999874211 11111 15799
Q ss_pred EEeccccccccccCceEEEEEeChHHHHHHHHHHHHhC-CCchHH--HH-HHHHHhh--HHHHHHHHHHHHHHHHHHHHH
Q 012321 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPN--AA-YLIIRGM--KTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 351 vv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G-~~ls~~--~A-~l~lrgL--~tl~~R~e~~~~na~~La~~L 424 (466)
++.|+||+++|+. ||++++++++++.++.....+. ++.++. .+ ..+++.+ +.++...++..++++.+.+.|
T Consensus 220 ~~~s~sK~~~g~~---gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 296 (405)
T 2vi8_A 220 VTTTTHKTLRGPR---GGMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASAL 296 (405)
T ss_dssp EEEESSSTTCCCS---CEEEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccCCCCC---CeEEEEcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999998654 4999999999888876543222 222222 22 1223221 345667788888999999999
Q ss_pred HcC
Q 012321 425 EAH 427 (466)
Q Consensus 425 ~~~ 427 (466)
++.
T Consensus 297 ~~~ 299 (405)
T 2vi8_A 297 QNE 299 (405)
T ss_dssp HHT
T ss_pred HhC
Confidence 886
No 187
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.76 E-value=2.1e-17 Score=184.19 Aligned_cols=215 Identities=13% Similarity=0.090 Sum_probs=157.5
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 207 YGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
........+++.+++++|.+..+++++|+ +|+.+++.+++++||+|+++.++|.+.+..+ ...|+++.+++.
T Consensus 202 ~~~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~----~~~G~~~v~v~~~~~ 277 (755)
T 2vyc_A 202 DHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGL----MLTGAKPVYMVPSRN 277 (755)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH----HHHCCEEEEECCCBC
T ss_pred cCccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHH----HHcCCEEEEEeCCCC
Confidence 34567889999999999999889999997 8899999999999999999999999876543 235777777642
Q ss_pred -------C-----CHHHHHHhccCC-Cce--------EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc
Q 012321 283 -------A-----DMEGLEAALNNN-NVS--------LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ 341 (466)
Q Consensus 283 -------~-----D~e~Le~ai~~~-~tk--------lV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~ 341 (466)
. |+++|+++++++ +++ +|++++| ||+|.+.|+++|+++|+++|+++++|++|+.....
T Consensus 278 ~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~ 356 (755)
T 2vyc_A 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_dssp TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGG
T ss_pred ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhccc
Confidence 2 899999998642 244 8999998 69999999999999999999999999998754322
Q ss_pred -------chhccC--CcE------EEeccccccccccCceEEEEEeChH--HH--HHHHHHHHHhC-CCchHHHHHH---
Q 012321 342 -------KALSLG--ADL------VLHSATKFIGGHNDVLAGSISGSGK--LV--TQIRNLHHVLG-GALNPNAAYL--- 398 (466)
Q Consensus 342 -------~pl~~g--aDi------vv~S~sK~lgG~gdv~gG~vvg~~e--li--~~l~~~~~~~G-~~ls~~~A~l--- 398 (466)
.++ .| +|+ ++.|+||+++|+. .+|+++.+++ .+ .++......+. ++.+......
T Consensus 357 ~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~~--~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~a 433 (755)
T 2vyc_A 357 NPIYADHYAM-RGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDV 433 (755)
T ss_dssp CGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSSSCCT--TCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHH
T ss_pred CcccCCcchh-cCCcCCccCCCeEEEECccccccCcC--CeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 223 56 676 9999999999875 4677766543 22 34443333332 2223221111
Q ss_pred HHHhhHH--HHHHHHHHHHHHHHHHHHHHcCCC
Q 012321 399 IIRGMKT--LHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 399 ~lrgL~t--l~~R~e~~~~na~~La~~L~~~p~ 429 (466)
+++.++. ...++++..++++.+.+.|++.++
T Consensus 434 A~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 434 AVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 1222221 356778888899999999988665
No 188
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.76 E-value=4.1e-18 Score=177.39 Aligned_cols=205 Identities=13% Similarity=0.146 Sum_probs=146.2
Q ss_pred HHHHHHHHHhhhC------C-CcEEEeCCH-HHHHHHHHHHh--------ccCCCEEEEcCCCccchHHHHHhhcccCCc
Q 012321 212 TVVVEEKMSALEG------A-ESTVIMASG-MSASTVMLLAL--------VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 212 ~~~Lee~lA~l~g------~-e~~v~~~SG-~aAi~~al~al--------l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi 275 (466)
...|++.|+++++ . ++.+++++| ++++.+++.++ +++||+|+++.|.|......+.. .|.
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~----~g~ 177 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKY----FDK 177 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHH----SCB
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHH----cCC
Confidence 5778888888774 2 345555555 59999999999 89999999999999886654432 344
Q ss_pred EEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccchhccCCcEEEec
Q 012321 276 TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (466)
Q Consensus 276 ~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-~~~pl~~gaDivv~S 354 (466)
++... ..|+++|+++++++ +++|++++|+||||.+++ + + ++ ++..+.|+.+..+. ....+..+.+|++.|
T Consensus 178 ~~~~~-~~d~~~l~~~~~~~-~k~v~l~~p~NPtG~~~~-~-~---l~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S 248 (427)
T 2hox_A 178 KGYVW-AGNAANYVNVSNPE-QYIEMVTSPNNPEGLLRH-A-V---IK--GCKSIYDMVYYWPHYTPIKYKADEDILLFT 248 (427)
T ss_dssp TTEEE-EEEGGGGTTCSCGG-GEEEEEESSCTTTCCCCC-C-S---ST--TCEEEEECTTCSTTTSCCCSCBCCSEEEEE
T ss_pred eeeee-cCCHHHHHHhhcCC-ceEEEEcCCCCCcccccH-H-H---Hc--CCCEEEeecccCCCCCccccCCCceEEEEe
Confidence 33222 23678888888764 999999999999999999 4 2 33 56789999865321 111122467899999
Q ss_pred cccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH---------------HHHHHHHHHHHHH
Q 012321 355 ATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---------------LHLRVQQQNSTAL 418 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~t---------------l~~R~e~~~~na~ 418 (466)
+||.++.+| .+.|++++ +++++++++..+.......+.+.++.+...|+. +....+++.++.+
T Consensus 249 ~SK~~g~~G-~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
T 2hox_A 249 MSKFTGHSG-SRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWV 327 (427)
T ss_dssp HHHHTSCGG-GCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHH
T ss_pred ChhcCCCCC-ceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHH
Confidence 999998777 45788888 589999998887765555556554444433332 2334566778888
Q ss_pred HHHHHHHcCCCc
Q 012321 419 RMAKILEAHPKV 430 (466)
Q Consensus 419 ~La~~L~~~p~V 430 (466)
.+.+.|+++|++
T Consensus 328 ~l~~~L~~~~g~ 339 (427)
T 2hox_A 328 NITALLDQSDRF 339 (427)
T ss_dssp HHHHHHTTSSSE
T ss_pred HHHHHHHhCcCc
Confidence 999999988655
No 189
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.76 E-value=3.3e-18 Score=179.11 Aligned_cols=166 Identities=13% Similarity=0.128 Sum_probs=124.8
Q ss_pred CCccCCCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEE
Q 012321 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~ 279 (466)
++....+..+...++++++++ +|.++.+++++|+ +|+.+++.+++++||+|++++++|.+....+.. .|.++.+
T Consensus 48 ~~d~~~~~~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~----~G~~~~~ 122 (446)
T 2x3l_A 48 GLDDLHHPEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDI----SQQEGHF 122 (446)
T ss_dssp TSCCTTSCSSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHH----HTCCEEE
T ss_pred CCccccCcchHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHH----cCCeEEE
Confidence 344444567788999999999 9987778888876 999999999999999999999999987654432 3555444
Q ss_pred eCC-----------CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-----ccch
Q 012321 280 IDP-----------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKA 343 (466)
Q Consensus 280 vd~-----------~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~-----~~~p 343 (466)
++. .|+++| +++ ++++|++++ .|++|.+.|+++|.++|+++|+++|+|++|+..+ ....
T Consensus 123 v~~~~~~~~~~~~~~d~~~l---~~~-~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~ 197 (446)
T 2x3l_A 123 IETHQSPLTNHYNKVNLSRL---NND-GHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDST 197 (446)
T ss_dssp CEEEECTTTSSEEEEEC-----------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCG
T ss_pred EeCeeccccCcCCCCCHHHH---cCC-CceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCCh
Confidence 432 245555 344 489999999 4569999999999999999999999999987622 2234
Q ss_pred hccCCcEEEeccccccccccCceEEEEEeChHHHH
Q 012321 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT 378 (466)
Q Consensus 344 l~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~ 378 (466)
...|+|+++.|+||+++++. .+|++++++++++
T Consensus 198 ~~~g~Di~~~S~~K~l~~~~--g~g~l~~~~~~i~ 230 (446)
T 2x3l_A 198 LNYQADYVVQSFHKTLPALT--MGSVLYIHKNAPY 230 (446)
T ss_dssp GGGTCSEEEECHHHHSSSCT--TCEEEEEETTCTT
T ss_pred HHcCCCEEEECCcccccccc--ccEEEEEcCCcCC
Confidence 45689999999999877664 2588888776644
No 190
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.76 E-value=9e-17 Score=167.00 Aligned_cols=218 Identities=15% Similarity=0.182 Sum_probs=148.9
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCccchHH-HHHhhc----
Q 012321 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRI-FIETVL---- 270 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~--------pGD~VLv~~~~y~~t~~-~~~~~l---- 270 (466)
++..+...+|+++|+++++ .++++++++|++|+.+++..+.. +||+||+.++.|++... .+...-
T Consensus 89 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~ 168 (449)
T 3a8u_X 89 QYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGN 168 (449)
T ss_dssp SCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHH
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhh
Confidence 5667889999999999985 36778888899999999987764 78999999999987532 222110
Q ss_pred ----c--cCCcEEEEeCC--------CC--------HHHHHHhccC---CCceEEEEeCCCCCCccccc----HHHHHHH
Q 012321 271 ----P--KMGITATVIDP--------AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (466)
Q Consensus 271 ----~--~~gi~v~~vd~--------~D--------~e~Le~ai~~---~~tklV~lesPsNPtG~v~d----l~~I~el 321 (466)
. ..++....++. .| +++|++++++ .++++|+++..+|++|.+.+ +++|.++
T Consensus 169 ~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l 248 (449)
T 3a8u_X 169 RKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREI 248 (449)
T ss_dssp HTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHH
T ss_pred ccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHH
Confidence 0 01333322221 25 8999998862 24788887665678999888 9999999
Q ss_pred HHhcCCEEEEeCCCCC-CCc-----cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH-------HhC
Q 012321 322 CHKKGAIVCIDGTFAT-PLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLG 388 (466)
Q Consensus 322 a~~~gillIvD~t~a~-~~~-----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~-------~~G 388 (466)
|+++|++||+||+|.. +.. ........|++ |++|.+++ |....|++++++++++.++.... ..+
T Consensus 249 ~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~ 325 (449)
T 3a8u_X 249 CNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVTN-GAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHG 325 (449)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCC
T ss_pred HHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEcccccC-CCCceEEEEECHHHHHHhhccCccccccccccc
Confidence 9999999999999853 211 11122345766 78899986 31346778888888888765310 111
Q ss_pred --CCchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHc
Q 012321 389 --GALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 389 --~~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~La~~L~~ 426 (466)
...++..+..++..++.+. ..+++..++.+.+.+.|++
T Consensus 326 ~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 367 (449)
T 3a8u_X 326 YTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHG 367 (449)
T ss_dssp CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHT
T ss_pred CCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 2345665555555555443 3566777788888888876
No 191
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.75 E-value=2.6e-17 Score=174.01 Aligned_cols=227 Identities=11% Similarity=0.157 Sum_probs=153.1
Q ss_pred CCccCCCCchhHHHH----HHHHHhhhCC---CcEEEeCCHHHHHHHHHHHh----c---------cC------CC-EEE
Q 012321 201 SFEYGRYGNPTTVVV----EEKMSALEGA---ESTVIMASGMSASTVMLLAL----V---------PA------GG-HIV 253 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~L----ee~lA~l~g~---e~~v~~~SG~aAi~~al~al----l---------~p------GD-~VL 253 (466)
.+.|.. .|....+ ++++++++|. +..+++++|++|+..++.+. + .+ || +|+
T Consensus 129 ~~~~~~--~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~ 206 (497)
T 2qma_A 129 MDSWDQ--ASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIV 206 (497)
T ss_dssp TTCGGG--CHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEE
T ss_pred ccchhh--ChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEE
Confidence 344543 3444555 4559999986 45777888889998888763 3 13 46 899
Q ss_pred EcCCCccchHHHHHhhcccCCc-EEEEeCCC-----CHHHHHHhccCC---Cc--eEEEEeCCCCCCcccccHHHHHHHH
Q 012321 254 TTTDCYRKTRIFIETVLPKMGI-TATVIDPA-----DMEGLEAALNNN---NV--SLFFTESPTNPFLRCVDVKLVSDLC 322 (466)
Q Consensus 254 v~~~~y~~t~~~~~~~l~~~gi-~v~~vd~~-----D~e~Le~ai~~~---~t--klV~lesPsNPtG~v~dl~~I~ela 322 (466)
++.+.|.+....+.. +. .|. ++..++.. |+++|+++|+++ .+ .+|+++.++|++|.+.|+++|.++|
T Consensus 207 ~s~~~h~s~~~~~~~-~g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~ 284 (497)
T 2qma_A 207 CSKKSHFTVQKSASW-MG-LGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMA 284 (497)
T ss_dssp EETTSCTHHHHHHHH-TT-SCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred ECCCchHHHHHHHHH-cC-CCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 999899886654432 21 133 56666543 789999888642 13 4888999999999999999999999
Q ss_pred HhcCCEEEEeCCCCCCCccch----h-cc-CCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHh--------
Q 012321 323 HKKGAIVCIDGTFATPLNQKA----L-SL-GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVL-------- 387 (466)
Q Consensus 323 ~~~gillIvD~t~a~~~~~~p----l-~~-gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~-------- 387 (466)
+++|+++|+|++|+.+....+ + .. ++|+++.|+||+++++.+ .|+++. ++..++.+......+
T Consensus 285 ~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~--~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~ 362 (497)
T 2qma_A 285 VKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTIS--CGALLVNDKSNFKFLLHHADYLNREHDELP 362 (497)
T ss_dssp HHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSS--CEEEEESCGGGGGGGCC-------------
T ss_pred HHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcc--eEEEEEeCHHHHHHhcCCchhcCCccccCC
Confidence 999999999999876543222 1 12 679999999999988753 466555 444443332100000
Q ss_pred ---CC------CchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEE
Q 012321 388 ---GG------ALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 388 ---G~------~ls~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~V~~V 433 (466)
+. ....+..|.+++ +.+.+..++++..++++++.+.|+++|.++.+
T Consensus 363 ~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 419 (497)
T 2qma_A 363 NLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELL 419 (497)
T ss_dssp -------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEC
T ss_pred CccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 00 012334455555 34567778888999999999999998877543
No 192
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.75 E-value=6.1e-18 Score=170.13 Aligned_cols=205 Identities=12% Similarity=0.067 Sum_probs=140.7
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeC-CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 210 PTTVVVEEKMSALEGAE---STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~~~-SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
...+++++++++++|.+ +.++++ +|++++..++.+++++||+|++..+.|.+.+ +...++..| ++.+++.
T Consensus 49 ~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g-~~~~v~~~~~ 125 (362)
T 2c0r_A 49 AVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASK--ALKEAKLIG-DTHVAASSEA 125 (362)
T ss_dssp HHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHHS-CEEEEEECGG
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHH--HHHHHHHhC-CeEEEecccc
Confidence 35788999999999985 445664 5569999999999999999998876654432 112333446 5555431
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCccc-ccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEecc
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSA 355 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v-~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~ 355 (466)
.|.++++ +++ +|++|++++|+||||.+ .|+++| +|+++|+|++|+.+.....+. ..|+++.|+
T Consensus 126 ~~~~~~~~~~~~~--i~~-~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~-~~d~~~~s~ 195 (362)
T 2c0r_A 126 SNYMTLPKLQEIQ--LQD-NAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLN-QFGLVYAGA 195 (362)
T ss_dssp GTTCSCCCGGGCC--CCT-TEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGG-GCSEEEEET
T ss_pred cccccCCCHHHcc--cCC-CcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccchh-HCcEEEEec
Confidence 1333332 665 49999999999999996 677776 899999999987654321222 248999999
Q ss_pred ccccccccCceEEEEEeChHHHHHHHHH------------HHHhCCCchHHHHHHHHHhhH------HHHHHHHHHHHHH
Q 012321 356 TKFIGGHNDVLAGSISGSGKLVTQIRNL------------HHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTA 417 (466)
Q Consensus 356 sK~lgG~gdv~gG~vvg~~eli~~l~~~------------~~~~G~~ls~~~A~l~lrgL~------tl~~R~e~~~~na 417 (466)
||++++.| .|+++++++++++++.. ......+.+....+.+...++ .++.+.+++.+++
T Consensus 196 ~K~~g~~G---~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 272 (362)
T 2c0r_A 196 QKNLGPSG---VTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKA 272 (362)
T ss_dssp TTTTCCSS---CEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred cccccCcC---cEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99998655 58998888877655321 001223444443333333333 3566778888899
Q ss_pred HHHHHHHHcCCCc
Q 012321 418 LRMAKILEAHPKV 430 (466)
Q Consensus 418 ~~La~~L~~~p~V 430 (466)
+++.+.|++++.+
T Consensus 273 ~~l~~~L~~~~~~ 285 (362)
T 2c0r_A 273 SLIYDAIDQSGGF 285 (362)
T ss_dssp HHHHHHHHTSTTS
T ss_pred HHHHHHHHHcCCc
Confidence 9999999988733
No 193
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.75 E-value=5.1e-17 Score=171.59 Aligned_cols=226 Identities=15% Similarity=0.192 Sum_probs=160.5
Q ss_pred CCccCCCCchhHHHHHHHH----HhhhCCC------------cEEEeCCHHHHHHHHHHHhcc-----------------
Q 012321 201 SFEYGRYGNPTTVVVEEKM----SALEGAE------------STVIMASGMSASTVMLLALVP----------------- 247 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~l----A~l~g~e------------~~v~~~SG~aAi~~al~all~----------------- 247 (466)
.+.|. ..|...++|+.+ ++++|.+ ..+++++|++|+..++.+...
T Consensus 107 ~~~~~--~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~ 184 (481)
T 4e1o_A 107 GFTWA--SSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESS 184 (481)
T ss_dssp CSSTT--TCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHH
T ss_pred cCCcC--CCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCccccccc
Confidence 34454 356666776654 6667754 468888999988888776532
Q ss_pred --CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCCC-----ceEEEEeCCCCCCcccccH
Q 012321 248 --AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN-----VSLFFTESPTNPFLRCVDV 315 (466)
Q Consensus 248 --pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-----~D~e~Le~ai~~~~-----tklV~lesPsNPtG~v~dl 315 (466)
+++.|+++...|.+...... ..|+++..++. .|+++|+++|++++ +.+|+++.++|++|.+.|+
T Consensus 185 ~~~~~~v~~s~~~H~s~~~~~~----~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l 260 (481)
T 4e1o_A 185 LNARLVAYASDQAHSSVEKAGL----ISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCL 260 (481)
T ss_dssp HHTTEEEEEETTSCHHHHHHHH----HHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred ccCCeEEEEcCcchHHHHHHHH----hCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCH
Confidence 57899999999998665442 35778877764 48999999996531 6788899999999999999
Q ss_pred HHHHHHHHhcCCEEEEeCCCCCCCcc----chhccC---CcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-HH-
Q 012321 316 KLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLG---ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HV- 386 (466)
Q Consensus 316 ~~I~ela~~~gillIvD~t~a~~~~~----~pl~~g---aDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~-~~- 386 (466)
++|+++|++||+++++|++|+.+... +....| +|.++.++||+++++.+. +++++.+++++.+..... ..
T Consensus 261 ~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~-g~l~~~~~~~l~~~~~~~~~yl 339 (481)
T 4e1o_A 261 SELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDC-TGFWVKDKYKLQQTFSVNPIYL 339 (481)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC-EEEEESBHHHHHTTTCCCCGGG
T ss_pred HHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCce-EEEEEeCHHHHHHHhcCCchhc
Confidence 99999999999999999998765321 222224 599999999999988643 445555555443211000 00
Q ss_pred -----------------hCCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEE
Q 012321 387 -----------------LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 387 -----------------~G~~ls~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~V~~V 433 (466)
.+.....+..|.+++ +.+.+..+++++.++++++.+.|++.|+++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 405 (481)
T 4e1o_A 340 RHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIP 405 (481)
T ss_dssp CCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECC
T ss_pred cCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 111123455565544 56678888999999999999999999877543
No 194
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.75 E-value=8.9e-17 Score=165.90 Aligned_cols=221 Identities=15% Similarity=0.137 Sum_probs=147.5
Q ss_pred cCCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhc---c----CCCEEEEcCCCccchHHHHHhhcc---
Q 012321 204 YGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV---P----AGGHIVTTTDCYRKTRIFIETVLP--- 271 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all---~----pGD~VLv~~~~y~~t~~~~~~~l~--- 271 (466)
+++|.++...+++++++++.+ .++++++++|++|+..++..+. + +||+||+.++.|++..........
T Consensus 80 ~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~ 159 (429)
T 1s0a_A 80 FGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDN 159 (429)
T ss_dssp CSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTT
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCch
Confidence 346667888999999999995 4677778888899999987653 2 699999999999874322211110
Q ss_pred ---------cCCcEEEEeC---------CCCHHHHHHhccC--CCceEEEEeCC-CCCCccccc----HHHHHHHHHhcC
Q 012321 272 ---------KMGITATVID---------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKG 326 (466)
Q Consensus 272 ---------~~gi~v~~vd---------~~D~e~Le~ai~~--~~tklV~lesP-sNPtG~v~d----l~~I~ela~~~g 326 (466)
..++....++ ..|+++|++++++ .++++|+++.+ +||+|.+.+ +++|.++|+++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~ 239 (429)
T 1s0a_A 160 SMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREG 239 (429)
T ss_dssp TTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHT
T ss_pred hhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 0123333232 2478899998873 24778877655 699998776 999999999999
Q ss_pred CEEEEeCCCCCC-C---c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH--H-HhC--CCchHHH
Q 012321 327 AIVCIDGTFATP-L---N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--H-VLG--GALNPNA 395 (466)
Q Consensus 327 illIvD~t~a~~-~---~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~--~-~~G--~~ls~~~ 395 (466)
+++|+||+|... . . ........|++ |++|.+++ |-...|++++++++++.++... . ..+ ...++..
T Consensus 240 ~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~ 316 (429)
T 1s0a_A 240 ILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTG-GTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLA 316 (429)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-SSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHH
T ss_pred CEEEEeehhhCCcccchHHHhhhcCCCCCEE--EecccccC-CCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHH
Confidence 999999998632 1 1 12223346766 67899986 3134688889999888876421 0 011 2234555
Q ss_pred HHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHcC
Q 012321 396 AYLIIRGMKTL--HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 396 A~l~lrgL~tl--~~R~e~~~~na~~La~~L~~~ 427 (466)
+..+...++.+ ....++..++++++.+.|++.
T Consensus 317 ~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l 350 (429)
T 1s0a_A 317 CAAANASLAILESGDWQQQVADIEVQLREQLAPA 350 (429)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 44444444433 234566677788888888764
No 195
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.74 E-value=2.4e-16 Score=163.45 Aligned_cols=191 Identities=15% Similarity=0.106 Sum_probs=130.9
Q ss_pred EEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhccC-CCce
Q 012321 229 VIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN-NNVS 298 (466)
Q Consensus 229 v~~~SG~aAi~~al~all~--pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-------~D~e~Le~ai~~-~~tk 298 (466)
+++++|+.|+.+++..++. + |+|++++|+|...... ++..|.++..++. .|++++++++++ .+++
T Consensus 101 ~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 175 (405)
T 3k7y_A 101 IQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNM----IESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGS 175 (405)
T ss_dssp EEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHH----HHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSC
T ss_pred EEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHH----HHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCe
Confidence 4455555999999988877 8 9999999999986544 3456777666642 378999998864 2368
Q ss_pred EEEEeCC-CCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc------hh----cc-CCcEEEecccccccccc
Q 012321 299 LFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK------AL----SL-GADLVLHSATKFIGGHN 363 (466)
Q Consensus 299 lV~lesP-sNPtG~v~d---l~~I~ela~~~gillIvD~t~a~~~~~~------pl----~~-gaDivv~S~sK~lgG~g 363 (466)
+|++++| |||||.+++ +++|+++|+++++++|+|++|....... +. .. ..-|++.|+||.|+.+|
T Consensus 176 ~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G 255 (405)
T 3k7y_A 176 SVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYG 255 (405)
T ss_dssp EEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTT
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCcc
Confidence 9998766 899999986 6678889999999999999987543210 11 11 23488999999999888
Q ss_pred CceEEEEE---eChHHHHHHHH----HHHHhCCCchHHHHHHHH---Hh-------hHHHHHHHHHHHHHHHHHHHHHH
Q 012321 364 DVLAGSIS---GSGKLVTQIRN----LHHVLGGALNPNAAYLII---RG-------MKTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 364 dv~gG~vv---g~~eli~~l~~----~~~~~G~~ls~~~A~l~l---rg-------L~tl~~R~e~~~~na~~La~~L~ 425 (466)
+. .||++ .++++++++.. .....-.+.+.+.+.++. .. .+.+....+++.++++.+.+.|+
T Consensus 256 lR-iG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 256 ER-AGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp TT-EEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-ceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 67764 36777665542 222222233334333322 21 22234444567888899999998
No 196
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.74 E-value=2.8e-16 Score=164.32 Aligned_cols=229 Identities=14% Similarity=0.107 Sum_probs=149.5
Q ss_pred CccCCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCccchHHHHHhh--
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 269 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~--------pGD~VLv~~~~y~~t~~~~~~~-- 269 (466)
|.+.++.++...+|+++|+++++ .+.+++++||++|+..++..++. ++++||+.++.|++........
T Consensus 86 ~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~ 165 (459)
T 4a6r_A 86 NTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGG 165 (459)
T ss_dssp CTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcC
Confidence 44556788999999999999985 46788888899999999988875 5799999999998744222111
Q ss_pred -------cccCCcEEEEeCCC---------C--------HHHHHHhccC---CCceEEEEeCCCCCCccccc----HHHH
Q 012321 270 -------LPKMGITATVIDPA---------D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLV 318 (466)
Q Consensus 270 -------l~~~gi~v~~vd~~---------D--------~e~Le~ai~~---~~tklV~lesPsNPtG~v~d----l~~I 318 (466)
.......+..++.. | +++|++++++ +++++|++|.++|++|.+.+ +++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l 245 (459)
T 4a6r_A 166 MKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEI 245 (459)
T ss_dssp CTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHH
T ss_pred ChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHH
Confidence 01111123333311 2 7888888862 34788888777777788776 9999
Q ss_pred HHHHHhcCCEEEEeCCCCCC-C---c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHH---HHHHhCC
Q 012321 319 SDLCHKKGAIVCIDGTFATP-L---N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LHHVLGG 389 (466)
Q Consensus 319 ~ela~~~gillIvD~t~a~~-~---~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~---~~~~~G~ 389 (466)
.++|++||++||+||+|... . . ........|++ +++|.+++++. ..|++++++++++.+.. .......
T Consensus 246 ~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~--t~sK~l~gg~~-~lg~v~~~~~i~~~~~~~~~~~~~~t~ 322 (459)
T 4a6r_A 246 ERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLF--TAAKGLSSGYL-PIGAVFVGKRVAEGLIAGGDFNHGFTY 322 (459)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSS-CCEEEEECHHHHHHHHHHCTTHHHHHH
T ss_pred HHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee--ehhhhhcCCCC-CccceeeCHHHHHHhhcCCCcccCCCC
Confidence 99999999999999997632 1 1 11122335666 46799987543 46888899999988872 2221112
Q ss_pred CchHHHHHHHHHhhHHHH--HHHHHHH-HHHHHHH----HHHHcCCCcEEE
Q 012321 390 ALNPNAAYLIIRGMKTLH--LRVQQQN-STALRMA----KILEAHPKVKRV 433 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~--~R~e~~~-~na~~La----~~L~~~p~V~~V 433 (466)
..+++.+..++..|+.+. ..+++.. ++.+++. +.|.++|.+..+
T Consensus 323 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 373 (459)
T 4a6r_A 323 SGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDV 373 (459)
T ss_dssp CSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEE
T ss_pred CCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 334555555555555432 2344444 4444444 444566766544
No 197
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.74 E-value=1.3e-16 Score=168.48 Aligned_cols=226 Identities=13% Similarity=0.089 Sum_probs=157.6
Q ss_pred CCccCCCCchhHHHHHHH----HHhhhCCC-----------cEEEeCCHHHHHHHHHHHhc-------------------
Q 012321 201 SFEYGRYGNPTTVVVEEK----MSALEGAE-----------STVIMASGMSASTVMLLALV------------------- 246 (466)
Q Consensus 201 ~~~Y~R~~~p~~~~Lee~----lA~l~g~e-----------~~v~~~SG~aAi~~al~all------------------- 246 (466)
.+.|. ..|...+||+. +++++|.+ ..+++++|++|+..++.+..
T Consensus 102 ~~~~~--~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~ 179 (475)
T 3k40_A 102 GFTWI--ASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTI 179 (475)
T ss_dssp SSSCC--CCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred ccCcc--CCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccc
Confidence 34444 45777777765 56777765 47888999988888776652
Q ss_pred cCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----CCHHHHHHhccCC-----CceEEEEeCCCCCCcccccHHH
Q 012321 247 PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKL 317 (466)
Q Consensus 247 ~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----~D~e~Le~ai~~~-----~tklV~lesPsNPtG~v~dl~~ 317 (466)
.+++.|+++...|.+..... ...|+++..++. .|+++|+++|+++ .+.+|++..++|++|.+.|+++
T Consensus 180 ~~~~~vi~s~~~H~s~~~~~----~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~ 255 (475)
T 3k40_A 180 LGKLVGYCSDQAHSSVERAG----LLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDE 255 (475)
T ss_dssp HHHEEEEEETTSCHHHHHHH----HHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHH
T ss_pred cCCeEEEECCCchHHHHHHH----HHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHH
Confidence 13568999999999866543 335788888875 5899999998753 1678888999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCCCCCCccc----hhcc---CCcEEEeccccccccccCceEEEEEeChHHHH-HHHHHHHHh--
Q 012321 318 VSDLCHKKGAIVCIDGTFATPLNQK----ALSL---GADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVL-- 387 (466)
Q Consensus 318 I~ela~~~gillIvD~t~a~~~~~~----pl~~---gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~-~l~~~~~~~-- 387 (466)
|+++|+++|+++++|++|+.+.... .... .+|.++.++||+++++.+. |++++.+++++. .+......+
T Consensus 256 I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~-g~l~~~~~~~l~~~~~~~~~yl~~ 334 (475)
T 3k40_A 256 CGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDC-SAMWLKDPSWVVNAFNVDPLYLKH 334 (475)
T ss_dssp HHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC-EEEEESSGGGC-------------
T ss_pred HHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCce-EEEEEeCHHHHHHHhcCCccccCC
Confidence 9999999999999999998653321 1112 3699999999999987643 444444454432 221100000
Q ss_pred ----------------CCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEE
Q 012321 388 ----------------GGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 388 ----------------G~~ls~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~L~~~p~V~~V 433 (466)
+.....+..|.+++ +.+.+..++++..++++++.+.|+++|+++.+
T Consensus 335 ~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~ 398 (475)
T 3k40_A 335 DMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELA 398 (475)
T ss_dssp --------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEES
T ss_pred CcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 00112344555444 55667888899999999999999999887554
No 198
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.74 E-value=5.5e-17 Score=167.92 Aligned_cols=217 Identities=15% Similarity=0.193 Sum_probs=150.3
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCccchHHHHHhhc----------ccC
Q 012321 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL----------PKM 273 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~-g~e~~v~~~SG~aAi~~al~al--l~pGD~VLv~~~~y~~t~~~~~~~l----------~~~ 273 (466)
+.++...+|+++|+++. +.+.+++++||++|+.+++... +.++++||+.++.|++......... ...
T Consensus 93 ~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~ 172 (434)
T 2epj_A 93 APGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSA 172 (434)
T ss_dssp SCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESST
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCC
Confidence 56788999999999999 6788889999999999998862 4557889998999877332110000 012
Q ss_pred Cc------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCcc
Q 012321 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQ 341 (466)
Q Consensus 274 gi------~v~~vd~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~~~ 341 (466)
|+ ++..++..|+++|++++++ .++++|++|..+|++|.+.+ +++|.++|++||++||+||+|......
T Consensus 173 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g 252 (434)
T 2epj_A 173 GVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLG 252 (434)
T ss_dssp TCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSS
T ss_pred CCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCC
Confidence 33 2444555689999999873 24888888776778999888 999999999999999999998732111
Q ss_pred -----chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH-HhCC--CchHHHHHHHHHhhHHHH--HHHH
Q 012321 342 -----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGG--ALNPNAAYLIIRGMKTLH--LRVQ 411 (466)
Q Consensus 342 -----~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~-~~G~--~ls~~~A~l~lrgL~tl~--~R~e 411 (466)
.......|++ |++|.+++ | ..+|++++++++++.++.... ..+. ..++..+..++..++.+. ...+
T Consensus 253 ~~~~~~~~~~~~di~--s~sK~l~~-G-~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~ 328 (434)
T 2epj_A 253 LEGAQGYFNIEGDII--VLGKIIGG-G-FPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYS 328 (434)
T ss_dssp TTHHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHH
T ss_pred cchhhHHhCCCCCee--eecchhcC-C-cceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHH
Confidence 1112346765 78899997 4 457999999988877654111 1121 345666555555555443 3456
Q ss_pred HHHHHHHHHHHHHHcC
Q 012321 412 QQNSTALRMAKILEAH 427 (466)
Q Consensus 412 ~~~~na~~La~~L~~~ 427 (466)
+..++.+++.+.|++.
T Consensus 329 ~~~~~~~~l~~~L~~~ 344 (434)
T 2epj_A 329 VSREAAKALEEAASEV 344 (434)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6677777777777653
No 199
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.73 E-value=4.5e-17 Score=179.78 Aligned_cols=213 Identities=13% Similarity=0.139 Sum_probs=156.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~-aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~---- 282 (466)
+.....++|+.+|+++|++.++++++|+ .|+..++.+++++||+||+++++|.+....+ ...|.++.+++.
T Consensus 193 ~~g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l----~lsGa~pv~v~~~~~~ 268 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLM----MMSDVTPIYFRPTRNA 268 (715)
T ss_dssp TBTHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH----HHSCCEEEEECCCBCT
T ss_pred CcHHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHH----HHcCCEEEEEeccccc
Confidence 4566899999999999999999999996 8999999999999999999999999977543 345777777653
Q ss_pred ------C-----CHHHHHHhccCC-Cce---EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc------
Q 012321 283 ------A-----DMEGLEAALNNN-NVS---LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------ 341 (466)
Q Consensus 283 ------~-----D~e~Le~ai~~~-~tk---lV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~------ 341 (466)
. |+++|+++++++ ++| +|++++| |++|.+.|+++|.++|++++ +++|++|+..+..
T Consensus 269 ~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~ 345 (715)
T 3n75_A 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEG 345 (715)
T ss_dssp TCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTT
T ss_pred cccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCcccc
Confidence 1 799999999742 244 8999999 89999999999999998764 7999998865421
Q ss_pred -chhccC--CcEE---EeccccccccccCceEEEEEeChHH-HHHHHHHHHHhC-CCchHHHHHH---HHHhhH--HHHH
Q 012321 342 -KALSLG--ADLV---LHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLG-GALNPNAAYL---IIRGMK--TLHL 408 (466)
Q Consensus 342 -~pl~~g--aDiv---v~S~sK~lgG~gdv~gG~vvg~~el-i~~l~~~~~~~G-~~ls~~~A~l---~lrgL~--tl~~ 408 (466)
.++..| +|++ ++|+||++++.. .+|++..++++ ..++......+. +.+++..... +.+-++ .-..
T Consensus 346 ~~al~~g~~aD~vii~~~S~hKtL~glt--qgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~ 423 (715)
T 3n75_A 346 KCGMSGGRVEGKVIYETQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKR 423 (715)
T ss_dssp SSTTSSSCCTTCEEEEEECHHHHSSCCT--TCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHH
T ss_pred ccccccCcCCCEEEEEEecccccccCCC--CeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHH
Confidence 123333 6766 999999999864 36787765542 234554444443 3333332221 122222 2345
Q ss_pred HHHHHHHHHHHHHHHHHcCCC
Q 012321 409 RVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 409 R~e~~~~na~~La~~L~~~p~ 429 (466)
++++..++++++.+.|++.+.
T Consensus 424 ~~~~l~~~a~~~r~~L~~i~~ 444 (715)
T 3n75_A 424 LINGSIERAIKFRKEIKRLRT 444 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 678888899999988887653
No 200
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.73 E-value=1.1e-16 Score=166.41 Aligned_cols=214 Identities=15% Similarity=0.182 Sum_probs=147.6
Q ss_pred hhHHHHHHHHHhhhCCCcE--EEeCCHHHHHHHHHHH-hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCC---
Q 012321 210 PTTVVVEEKMSALEGAEST--VIMASGMSASTVMLLA-LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e~~--v~~~SG~aAi~~al~a-ll~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~--- 283 (466)
+...++++++++++|.+.. +++.+|++++.+++.+ .+++||+|+++.+.|+.+...+...++..|+++..++..
T Consensus 108 ~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~ 187 (438)
T 1wyu_A 108 QATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGR 187 (438)
T ss_dssp HHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTB
T ss_pred HHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCc
Confidence 4578999999999998643 4555555444444444 358999999999999988766655556678998888742
Q ss_pred -CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC-CCCCCccchhccCCcEEEecccc----
Q 012321 284 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATK---- 357 (466)
Q Consensus 284 -D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t-~a~~~~~~pl~~gaDivv~S~sK---- 357 (466)
|+++ +++ +|++|++++| ||+|.+.|+++|.++||++|+++++|.. .+.+....+..+|+|+++.|.+|
T Consensus 188 ~d~~~----i~~-~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~ 261 (438)
T 1wyu_A 188 TPLPE----VGE-EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLP 261 (438)
T ss_dssp CCCCC----CCT-TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCC
T ss_pred cCHHH----hCC-CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCC
Confidence 3333 665 4999999999 9999999999999999999999997744 32233334456789999999554
Q ss_pred -ccccccCceEEEEEeChHHHHHHHHH-------------------------HHHhC-CCc---hHHH---HH--HHHHh
Q 012321 358 -FIGGHNDVLAGSISGSGKLVTQIRNL-------------------------HHVLG-GAL---NPNA---AY--LIIRG 402 (466)
Q Consensus 358 -~lgG~gdv~gG~vvg~~eli~~l~~~-------------------------~~~~G-~~l---s~~~---A~--l~lrg 402 (466)
+++|+ .+|++++++++++.+... +...+ ... .... ++ +...+
T Consensus 262 ~~~~Gp---~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~ 338 (438)
T 1wyu_A 262 MGFGGP---HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALG 338 (438)
T ss_dssp CGGGCS---CCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHH
T ss_pred ccCCCC---CeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhC
Confidence 45555 368999998876654210 11112 111 2222 22 22122
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCcEE
Q 012321 403 MKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 403 L~tl~~R~e~~~~na~~La~~L~~~p~V~~ 432 (466)
-+.+....++..++++++.+.|++.|+++.
T Consensus 339 ~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~ 368 (438)
T 1wyu_A 339 PEGLREVALKSVEMAHKLHALLLEVPGVRP 368 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 233566677788899999999999877643
No 201
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.73 E-value=2.7e-18 Score=171.86 Aligned_cols=205 Identities=10% Similarity=0.072 Sum_probs=140.8
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCH-HHHHHHHHHHhccC---CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC
Q 012321 210 PTTVVVEEKMSALEGAE---STVIMASG-MSASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~~~SG-~aAi~~al~all~p---GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~ 282 (466)
+..+++++++++++|.+ +.++++++ ++|+.+++.+++.+ ||+|+++.+.|... ..+...| ++.+++.
T Consensus 48 ~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-----~~~~~~g-~~~~v~~ 121 (360)
T 1w23_A 48 EVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-----KEAKLLG-ETHIAAS 121 (360)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-----HHHHTTS-EEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-----HHHHHhC-CeEEeec
Confidence 35789999999999975 34455555 79999999998865 56677665555431 1234457 7666642
Q ss_pred ------CCHHHHHH-hccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEecc
Q 012321 283 ------ADMEGLEA-ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSA 355 (466)
Q Consensus 283 ------~D~e~Le~-ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~ 355 (466)
.|+++|++ ++++ +|++|++++|+||||.+.+ +| ++++|+++|+|++++.+.....+. ..|+++.|+
T Consensus 122 ~~~~~~~d~~~l~~~~i~~-~~k~v~~~~~~nptG~~~~--~i---~~~~~~~li~D~a~~~~~~~~~~~-~~di~~~s~ 194 (360)
T 1w23_A 122 TKANSYQSIPDFSEFQLNE-NDAYLHITSNNTIYGTQYQ--NF---PEINHAPLIADMSSDILSRPLKVN-QFGMIYAGA 194 (360)
T ss_dssp CGGGTSCSCCCGGGCCCCT-TEEEEEEESEETTTTEECS--SC---CCCCSSCEEEECTTTTTSSCCCGG-GCSEEEEET
T ss_pred ccccCcCCccchHhhccCC-CCCEEEEeCCCCCcceecc--cc---cccCCceEEEechhhcCCCCcCcc-cCCEEEEEc
Confidence 46788888 8876 4999999999999999987 33 338999999999987654321222 138999999
Q ss_pred ccccccccCceEEEEEeChHHHHHHHHHHH------------HhCCCchHHHHHHHHHhhH------HHHHHHHHHHHHH
Q 012321 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH------------VLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTA 417 (466)
Q Consensus 356 sK~lgG~gdv~gG~vvg~~eli~~l~~~~~------------~~G~~ls~~~A~l~lrgL~------tl~~R~e~~~~na 417 (466)
||++++.| .|+++++++++++++.... ...++.+....+.+...++ .++.+.++..+++
T Consensus 195 sK~~~~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 271 (360)
T 1w23_A 195 QKNLGPSG---VTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKA 271 (360)
T ss_dssp TTTTSCTT---CEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred ccccCCCC---cEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 99998665 5888888887765543210 1112334433333333333 2455677888899
Q ss_pred HHHHHHHHcCCCc
Q 012321 418 LRMAKILEAHPKV 430 (466)
Q Consensus 418 ~~La~~L~~~p~V 430 (466)
+.+.+.|+++|.+
T Consensus 272 ~~l~~~L~~~~~~ 284 (360)
T 1w23_A 272 KIIYDTIDESNGF 284 (360)
T ss_dssp HHHHHHHHTTTTS
T ss_pred HHHHHHHHHccCc
Confidence 9999999988753
No 202
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.73 E-value=2.2e-16 Score=163.01 Aligned_cols=218 Identities=13% Similarity=0.036 Sum_probs=145.1
Q ss_pred CCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhcc-CCCEEEEcCCCccchHHHHHhh----------c
Q 012321 205 GRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETV----------L 270 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~all~-pGD~VLv~~~~y~~t~~~~~~~----------l 270 (466)
.++.++...+|++++++++|. ++++++++|++|+..++..+.. +||+||+.+|.|++........ .
T Consensus 81 ~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~ 160 (419)
T 2eo5_A 81 NDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIV 160 (419)
T ss_dssp SCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSS
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCcccccccc
Confidence 457788899999999999985 3566667788999999887543 4999999999998643322111 1
Q ss_pred ccCCcEEEEeCCC---------------------CHHHHH-HhccC----CCceEEEEeCCCCCCccccc----HHHHHH
Q 012321 271 PKMGITATVIDPA---------------------DMEGLE-AALNN----NNVSLFFTESPTNPFLRCVD----VKLVSD 320 (466)
Q Consensus 271 ~~~gi~v~~vd~~---------------------D~e~Le-~ai~~----~~tklV~lesPsNPtG~v~d----l~~I~e 320 (466)
......+..++.. |+++|+ +++++ .++++|+++..+||+|.+.+ +++|.+
T Consensus 161 ~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~ 240 (419)
T 2eo5_A 161 GPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQK 240 (419)
T ss_dssp CCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHH
T ss_pred CCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHH
Confidence 0111233444321 367888 88863 24677776544567898665 999999
Q ss_pred HHHhcCCEEEEeCCCCCCC-c-----cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHH
Q 012321 321 LCHKKGAIVCIDGTFATPL-N-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (466)
Q Consensus 321 la~~~gillIvD~t~a~~~-~-----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~ 394 (466)
+|+++|++||+||+|.... . ........|++ |++|.+++ |-.+.|+++++++++ .+ ..........++.
T Consensus 241 l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~-G~~riG~~~~~~~~~-~~-~~~~~~t~~~n~~ 315 (419)
T 2eo5_A 241 LAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGG-GIMPIGATIFRKDLD-FK-PGMHSNTFGGNAL 315 (419)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TTSCCEEEEEEGGGC-CC-------CCCCCHH
T ss_pred HHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccC-CccceEEEEEchHhh-cC-CcccCCCCCCCHH
Confidence 9999999999999986321 1 11122345665 78999996 413568888888877 66 2111222334566
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 395 AAYLIIRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 395 ~A~l~lrgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.+..+...++.+....++..++++++.+.|++.
T Consensus 316 ~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~ 348 (419)
T 2eo5_A 316 ACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGL 348 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555555556555446677788889999999875
No 203
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.73 E-value=1e-16 Score=164.58 Aligned_cols=215 Identities=14% Similarity=0.138 Sum_probs=142.7
Q ss_pred CCCchhHHHHHHHHHhhh-C-C-CcEEEeCCHHHHHHHHHH---HhccCCCEEEEcCCCccchHH-HHHhh-cc-----c
Q 012321 206 RYGNPTTVVVEEKMSALE-G-A-ESTVIMASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRI-FIETV-LP-----K 272 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~-g-~-e~~v~~~SG~aAi~~al~---all~pGD~VLv~~~~y~~t~~-~~~~~-l~-----~ 272 (466)
++.++...+|+++|++++ | . ++.+++++|++|+.+++. ++.++| +|++.++.|++... .+... .+ .
T Consensus 80 ~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~ 158 (426)
T 1sff_A 80 VLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAG 158 (426)
T ss_dssp TEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTT
T ss_pred ccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccc
Confidence 445788899999999999 5 3 456677777899999987 666766 89999999987543 22211 11 1
Q ss_pred CC---cEEEEeCC----------CCHHHHHHhccC----CCceEEEEe-CCCCCCccccc----HHHHHHHHHhcCCEEE
Q 012321 273 MG---ITATVIDP----------ADMEGLEAALNN----NNVSLFFTE-SPTNPFLRCVD----VKLVSDLCHKKGAIVC 330 (466)
Q Consensus 273 ~g---i~v~~vd~----------~D~e~Le~ai~~----~~tklV~le-sPsNPtG~v~d----l~~I~ela~~~gillI 330 (466)
++ ..+..++. .|+++|++++++ .++++|+++ +++| ||.+.+ +++|.++|+++|++||
T Consensus 159 ~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li 237 (426)
T 1sff_A 159 MGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLI 237 (426)
T ss_dssp SCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEE
T ss_pred cCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 11 01333332 268899988862 247888885 3567 997777 9999999999999999
Q ss_pred EeCCCCCCCc------cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH
Q 012321 331 IDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (466)
Q Consensus 331 vD~t~a~~~~------~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~ 404 (466)
+|++|..... ........|++ |+||++++ | .+.|++++++++++.++..........++..+..+...++
T Consensus 238 ~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-G-lriG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~ 313 (426)
T 1sff_A 238 ADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-G-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLK 313 (426)
T ss_dssp EECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-S-SCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred EechhhccCcccchhhhhhcCCCCCEE--EEcccccC-C-CceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHH
Confidence 9999874211 11122235655 88999997 5 5679999998888776532222223345665555554554
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHc
Q 012321 405 TLHL--RVQQQNSTALRMAKILEA 426 (466)
Q Consensus 405 tl~~--R~e~~~~na~~La~~L~~ 426 (466)
.+.. ..++..++++.+.+.|++
T Consensus 314 ~~~~~~~~~~~~~~~~~l~~~l~~ 337 (426)
T 1sff_A 314 VFEQENLLQKANDLGQKLKDGLLA 337 (426)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHH
Confidence 4432 345566677777776665
No 204
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.73 E-value=4.6e-16 Score=162.76 Aligned_cols=229 Identities=11% Similarity=0.087 Sum_probs=149.7
Q ss_pred CccCCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCccchHHHHHhh--
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 269 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~--------pGD~VLv~~~~y~~t~~~~~~~-- 269 (466)
|.+.++.++...+|+++|+++.+ .+.+++++||++|+..++..++. ++++||+.++.|++........
T Consensus 87 ~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~ 166 (460)
T 3gju_A 87 HAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTG 166 (460)
T ss_dssp CCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCC
T ss_pred ccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccC
Confidence 44456678889999999999874 36788888999999999988764 5689999999998744222111
Q ss_pred -------cccCCcEEEEeC--C----CC------------HHHHHHhccC---CCceEEEEeCCCCCCccccc----HHH
Q 012321 270 -------LPKMGITATVID--P----AD------------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKL 317 (466)
Q Consensus 270 -------l~~~gi~v~~vd--~----~D------------~e~Le~ai~~---~~tklV~lesPsNPtG~v~d----l~~ 317 (466)
+......+..++ . .| +++|++++++ +++++|++|.++|++|.+.+ +++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~ 246 (460)
T 3gju_A 167 LDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEK 246 (460)
T ss_dssp CGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHH
T ss_pred CcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHH
Confidence 111111233333 1 12 6889888862 34899999988888888665 999
Q ss_pred HHHHHHhcCCEEEEeCCCCCC-C---c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH-------H
Q 012321 318 VSDLCHKKGAIVCIDGTFATP-L---N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------H 384 (466)
Q Consensus 318 I~ela~~~gillIvD~t~a~~-~---~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~-------~ 384 (466)
|.++|++||++||+||+|... . . ........|++ +++|.++++. ...|++++++++++.+... .
T Consensus 247 l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~l~gG~-~~lg~v~~~~~i~~~~~~~~~~~~~~~ 323 (460)
T 3gju_A 247 IQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI--TIAKGLTSAY-APLSGVIVADRVWQVLVQGSDKLGSLG 323 (460)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--EECGGGTTTS-SCCEEEEEEHHHHHHHHHHHHHHCSCS
T ss_pred HHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee--eeehhhcCCC-CCeEEEEECHHHHHHHhcccccccccc
Confidence 999999999999999998632 1 1 11122235665 5779998742 3468889999999888642 1
Q ss_pred HHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHHHH----HHHHHHcCCCcEEE
Q 012321 385 HVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALR----MAKILEAHPKVKRV 433 (466)
Q Consensus 385 ~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~----La~~L~~~p~V~~V 433 (466)
.......++..+..++..++.+. ..+++..++.++ |.+.|+++|.+..+
T Consensus 324 ~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 378 (460)
T 3gju_A 324 HGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEV 378 (460)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 11122345666555555555332 223444444444 44555667766544
No 205
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.72 E-value=1.6e-16 Score=165.43 Aligned_cols=215 Identities=18% Similarity=0.211 Sum_probs=140.9
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHH---hccCCCEEEEcCCCccchHHHHHhhc------c-cCCc
Q 012321 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLA---LVPAGGHIVTTTDCYRKTRIFIETVL------P-KMGI 275 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~-g~e~~v~~~SG~aAi~~al~a---ll~pGD~VLv~~~~y~~t~~~~~~~l------~-~~gi 275 (466)
+.++..+++.+++++++ +.+++++++||++|+..++.. +. .+++||+.++.|++......... . ..|+
T Consensus 94 ~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~ 172 (453)
T 2cy8_A 94 ASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFT-GRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGV 172 (453)
T ss_dssp SSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHH-CCCEEEEECC-------------------------
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhh-CCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCC
Confidence 46788889999998887 457788889999999999887 44 45788888899986433211100 0 0133
Q ss_pred ------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCcc--
Q 012321 276 ------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (466)
Q Consensus 276 ------~v~~vd~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~~~-- 341 (466)
.+..++..|+++|++++++ .++++|+++..+|++|.+.+ +++|.++|++||++||+||+|......
T Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~ 252 (453)
T 2cy8_A 173 LPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVGNH 252 (453)
T ss_dssp ---CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTCTT
T ss_pred CccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccCch
Confidence 2444555789999999873 24788888766678998887 999999999999999999998732111
Q ss_pred ---chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHH---H--HHHhCCCchHHHHHHHHHhhHH-H-HHHHH
Q 012321 342 ---KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---L--HHVLGGALNPNAAYLIIRGMKT-L-HLRVQ 411 (466)
Q Consensus 342 ---~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~---~--~~~~G~~ls~~~A~l~lrgL~t-l-~~R~e 411 (466)
.......|++ |++|.+++ | ..+|++++++++++.++. . ........++..+..++..++. + +...+
T Consensus 253 ~~~~~~~~~~di~--s~sK~l~~-G-~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~ 328 (453)
T 2cy8_A 253 GMQALLDVQPDLT--CLAKASAG-G-LPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCA 328 (453)
T ss_dssp HHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred hhhHHhCCCCcEE--EEChhhhC-C-cceEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHH
Confidence 1122345765 78899997 4 357999999988877654 1 1111123456666665556655 3 33456
Q ss_pred HHHHHHHHHHHHHHc
Q 012321 412 QQNSTALRMAKILEA 426 (466)
Q Consensus 412 ~~~~na~~La~~L~~ 426 (466)
+..++.+.+.+.|++
T Consensus 329 ~~~~~~~~l~~~L~~ 343 (453)
T 2cy8_A 329 KINDLGQFAREAMNH 343 (453)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 667777777777765
No 206
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.72 E-value=6.4e-17 Score=168.40 Aligned_cols=213 Identities=17% Similarity=0.172 Sum_probs=140.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccC-----C----CEEEEcCCCccchHHHHHhhcccCCcEEE
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA-----G----GHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~p-----G----D~VLv~~~~y~~t~~~~~~~l~~~gi~v~ 278 (466)
..+...+|+++++++++.+++++++||++|+.+++.+++.+ | |+|++. +.|+.++...... .+..+.
T Consensus 72 ~~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~~---~~~~~~ 147 (467)
T 2oqx_A 72 GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTTQGHSQI---NGCTVR 147 (467)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHHHHHH---TTCEEE
T ss_pred cCchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEec-ccccccchhhhhc---cCccee
Confidence 35678899999999999999999999999999999998888 9 998876 4554433222111 111111
Q ss_pred E------e--C-------CCCHHHHHHhccC---CCceEEEEeCCCCCC-ccccc---HHHHHHHHHhcCCEEEEeCCCC
Q 012321 279 V------I--D-------PADMEGLEAALNN---NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 279 ~------v--d-------~~D~e~Le~ai~~---~~tklV~lesPsNPt-G~v~d---l~~I~ela~~~gillIvD~t~a 336 (466)
. + + ..|+++|++++++ .++++|++++|+||+ |.+.+ +++|.++|++||++||+|+++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~ 227 (467)
T 2oqx_A 148 NVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 227 (467)
T ss_dssp ECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTH
T ss_pred eccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhh
Confidence 1 1 1 1389999999973 248999999999998 77764 7899999999999999996543
Q ss_pred C--------------CCccchhc----cCCcEEEeccccccccccCceEEEEEeChH-HHHHHHHHHHH---hC-----C
Q 012321 337 T--------------PLNQKALS----LGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHV---LG-----G 389 (466)
Q Consensus 337 ~--------------~~~~~pl~----~gaDivv~S~sK~lgG~gdv~gG~vvg~~e-li~~l~~~~~~---~G-----~ 389 (466)
. +.....+. .++|+++.|++|+++++ +||+++++++ +++.+..++.. .+ +
T Consensus 228 ~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (467)
T 2oqx_A 228 AENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVP---MGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYG 304 (467)
T ss_dssp HHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCS---SCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCC
T ss_pred hhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCC---CceEEEecChhHHHHHHHHHHhhhccCCccccc
Confidence 2 11111111 34788999999999865 3688888766 55444433221 11 1
Q ss_pred CchHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHcC
Q 012321 390 ALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl--~~R~e~~~~na~~La~~L~~~ 427 (466)
.........+..+++.. ..++++..++++.+.+.|+++
T Consensus 305 ~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (467)
T 2oqx_A 305 GLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI 344 (467)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 12221111112232322 235666678888999999886
No 207
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.72 E-value=2e-16 Score=164.87 Aligned_cols=226 Identities=15% Similarity=0.119 Sum_probs=142.4
Q ss_pred CCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc----CC----CEEEEcCCCccchHHHHHhh-----
Q 012321 205 GRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP----AG----GHIVTTTDCYRKTRIFIETV----- 269 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~----pG----D~VLv~~~~y~~t~~~~~~~----- 269 (466)
.++.++...+|+++|+++.+ .+.+++++||++|+..++..+.. +| |+||+.++.|++........
T Consensus 82 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 161 (448)
T 3dod_A 82 LGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIEL 161 (448)
T ss_dssp SSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC------------------
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCcc
Confidence 45667889999999999985 36788889999999999988765 55 99999999997743211110
Q ss_pred ----cccCCcEEEEeCCC----------------CHHHHHHhcc--CCCceEEEEeCCC-CCCccccc----HHHHHHHH
Q 012321 270 ----LPKMGITATVIDPA----------------DMEGLEAALN--NNNVSLFFTESPT-NPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 270 ----l~~~gi~v~~vd~~----------------D~e~Le~ai~--~~~tklV~lesPs-NPtG~v~d----l~~I~ela 322 (466)
.......+..++.. |+++|+++++ +.++++|++|.++ |++|.+.+ +++|.++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~ 241 (448)
T 3dod_A 162 FHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELC 241 (448)
T ss_dssp -----------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHH
T ss_pred ccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHH
Confidence 00001122233322 3788999886 2348899998888 89997765 99999999
Q ss_pred HhcCCEEEEeCCCCCCC----c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHH-------HHHHhCC
Q 012321 323 HKKGAIVCIDGTFATPL----N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-------LHHVLGG 389 (466)
Q Consensus 323 ~~~gillIvD~t~a~~~----~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~-------~~~~~G~ 389 (466)
++||++||+||+|.... . ........|++ +++|.+++ |....|++++++++++.+.. .......
T Consensus 242 ~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~--t~sK~l~~-G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~ 318 (448)
T 3dod_A 242 TTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLM--AAGKGITG-GYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSY 318 (448)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTT
T ss_pred HHhCCEEEEeccccCCCcccchhhhhhcCCCCCEE--EecccccC-CcCceEEEEECHHHHHHhhhccccCCcccccCCC
Confidence 99999999999976321 1 11122234655 57899986 43357899999999888754 2211222
Q ss_pred CchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHH---cCCCcEEE
Q 012321 390 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILE---AHPKVKRV 433 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~La~~L~---~~p~V~~V 433 (466)
..+++.+..++..++.+. ..+++..++.+++.+.|+ .+|.+..+
T Consensus 319 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 367 (448)
T 3dod_A 319 TGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDI 367 (448)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred CcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 345666665555555432 234555555555555544 55655443
No 208
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.71 E-value=3e-16 Score=168.68 Aligned_cols=151 Identities=16% Similarity=0.265 Sum_probs=114.8
Q ss_pred cEEEeCCHH-HHHHHHHHH-----hccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-------CCHHHHHHhcc
Q 012321 227 STVIMASGM-SASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALN 293 (466)
Q Consensus 227 ~~v~~~SG~-aAi~~al~a-----ll~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-------~D~e~Le~ai~ 293 (466)
+.|++++|+ +++..++.+ ++++||+|++++|.|.+..... .+...|+++..++. .|+++|+++++
T Consensus 166 ~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~ 243 (546)
T 2zy4_A 166 VNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIP--ELAQYALEEVAINADPSLNWQYPDSELDKLKD 243 (546)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHH--HSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS
T ss_pred ceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHH--HHcCCCcEEEEEecCcccCCCCCHHHHHHhhC
Confidence 456666665 899988887 4789999999999999865432 24445677666642 57899998886
Q ss_pred CCCceEEEEeCCCCCCccccc---HHHHHHHH--HhcCCEEEEeCCCCCCCc--cchhc--cCCcEEEeccccccccccC
Q 012321 294 NNNVSLFFTESPTNPFLRCVD---VKLVSDLC--HKKGAIVCIDGTFATPLN--QKALS--LGADLVLHSATKFIGGHND 364 (466)
Q Consensus 294 ~~~tklV~lesPsNPtG~v~d---l~~I~ela--~~~gillIvD~t~a~~~~--~~pl~--~gaDivv~S~sK~lgG~gd 364 (466)
+ ++++|++++|+||||.+++ +++|.++| +++|+++|+|++|..... ..... .+.++++.|+||++|.+|.
T Consensus 244 ~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~Gl 322 (546)
T 2zy4_A 244 P-AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGW 322 (546)
T ss_dssp T-TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGG
T ss_pred C-CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCc
Confidence 6 4999999999999999986 56678888 789999999999875432 11122 2457999999999987774
Q ss_pred ceEEEEEeChH-HHHHHH
Q 012321 365 VLAGSISGSGK-LVTQIR 381 (466)
Q Consensus 365 v~gG~vvg~~e-li~~l~ 381 (466)
+.|+++++++ +++++.
T Consensus 323 -RiG~~~~~~~~l~~~l~ 339 (546)
T 2zy4_A 323 -RLGVVAAHQQNVFDLAL 339 (546)
T ss_dssp -CEEEEEEESSCHHHHHH
T ss_pred -ceEEEEECCHHHHHHHH
Confidence 5788888765 777663
No 209
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.71 E-value=1.5e-16 Score=164.33 Aligned_cols=216 Identities=19% Similarity=0.246 Sum_probs=146.1
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhh---------cc-cC
Q 012321 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV---------LP-KM 273 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g-~e~~v~~~SG~aAi~~al~all~--pGD~VLv~~~~y~~t~~~~~~~---------l~-~~ 273 (466)
+.++...+|+++|+++++ .+++++++||++|+..++..+.. ++++||+.++.|++........ .. ..
T Consensus 92 ~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 171 (434)
T 3l44_A 92 TPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSA 171 (434)
T ss_dssp SCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSST
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcC
Confidence 568889999999999984 57788888999999999987654 7899999999997743111000 00 00
Q ss_pred Cc------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC---
Q 012321 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (466)
Q Consensus 274 gi------~v~~vd~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~--- 338 (466)
++ ++..++..|+++|++++++ .++++|++|.++|++|.+.+ +++|.++|++||++||+||+|...
T Consensus 172 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g 251 (434)
T 3l44_A 172 GVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFM 251 (434)
T ss_dssp TCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSS
T ss_pred CCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceecc
Confidence 11 3445556689999998862 24788888877777888887 999999999999999999998742
Q ss_pred Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH---HHhCCCchHHHHHHHHHhhHHH--HHHHH
Q 012321 339 LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTL--HLRVQ 411 (466)
Q Consensus 339 ~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~---~~~G~~ls~~~A~l~lrgL~tl--~~R~e 411 (466)
.. ........|++ +++|.+++ | ...|++++++++++.+.... .......++..+..++..++.+ +..++
T Consensus 252 ~~~~~~~~~~~~di~--t~sK~~~~-G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~ 327 (434)
T 3l44_A 252 YGGAQDLLGVTPDLT--ALGKVIGG-G-LPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYE 327 (434)
T ss_dssp SSCHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHH
T ss_pred ccHHHHHcCCCCCee--ehhhhhcC-C-cCeeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHH
Confidence 11 11122334654 67899984 4 45788899999988765421 1111234555555555444433 23455
Q ss_pred HHHHHHHHHHHHHHc
Q 012321 412 QQNSTALRMAKILEA 426 (466)
Q Consensus 412 ~~~~na~~La~~L~~ 426 (466)
+..++.+++.+.|++
T Consensus 328 ~~~~~~~~l~~~L~~ 342 (434)
T 3l44_A 328 KLDELGATLEKGILE 342 (434)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 566666666666654
No 210
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.71 E-value=1.5e-16 Score=167.08 Aligned_cols=228 Identities=13% Similarity=0.129 Sum_probs=155.1
Q ss_pred cCCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCccchHHHHHhh----
Q 012321 204 YGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV---- 269 (466)
Q Consensus 204 Y~R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~-------pG-D~VLv~~~~y~~t~~~~~~~---- 269 (466)
++++.++...+|+++|+++.+ .+.+++++||++|+..++..+.. +| ++||+.++.|.+........
T Consensus 112 ~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 191 (457)
T 3tfu_A 112 FGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPH 191 (457)
T ss_dssp SSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC
T ss_pred ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCc
Confidence 467778999999999999995 36788889999999999988765 55 48999999997743221111
Q ss_pred ------cccCCcEEEEeCC-------CCHHHHHHhccC--CCceEEEEeC-CCCCCccccc----HHHHHHHHHhcCCEE
Q 012321 270 ------LPKMGITATVIDP-------ADMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIV 329 (466)
Q Consensus 270 ------l~~~gi~v~~vd~-------~D~e~Le~ai~~--~~tklV~les-PsNPtG~v~d----l~~I~ela~~~gill 329 (466)
.......+.+++. .|+++|++++++ .++++|++|. ++|++|.+.+ +++|.++|+++|++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gill 271 (457)
T 3tfu_A 192 GGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLL 271 (457)
T ss_dssp ----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEE
T ss_pred ccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 0111112222322 378899998872 2489999999 8999998875 999999999999999
Q ss_pred EEeCCCCCC----Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH-----HHHhCCCchHHHHHH
Q 012321 330 CIDGTFATP----LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGGALNPNAAYL 398 (466)
Q Consensus 330 IvD~t~a~~----~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~-----~~~~G~~ls~~~A~l 398 (466)
|+||+|... .. ........|++ +++|.++|+. ...|++++++++++.+... ........++..+..
T Consensus 272 I~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~gG~-~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aa 348 (457)
T 3tfu_A 272 IFDEIATGFGRTGALFAADHAGVSPDIM--CVGKALTGGY-LSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAV 348 (457)
T ss_dssp EEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTS-SCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHH
T ss_pred EEEcCccCCccccchhHhHhcCCCceEE--EEChhhhCCC-cceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHH
Confidence 999997632 11 12223345766 7889998742 3468899999999887522 111112346666666
Q ss_pred HHHhhHHHH--HHHHHHHHHHHHHHHHHHc---CCCcEEEe
Q 012321 399 IIRGMKTLH--LRVQQQNSTALRMAKILEA---HPKVKRVH 434 (466)
Q Consensus 399 ~lrgL~tl~--~R~e~~~~na~~La~~L~~---~p~V~~V~ 434 (466)
++..|+.+. ...++..++.+++.+.|++ +|.+..+.
T Consensus 349 a~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr 389 (457)
T 3tfu_A 349 SVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDVR 389 (457)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEEE
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeeee
Confidence 555565442 2355666777777777765 45565543
No 211
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.71 E-value=1.2e-16 Score=163.27 Aligned_cols=213 Identities=11% Similarity=0.023 Sum_probs=138.6
Q ss_pred hhHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCH
Q 012321 210 PTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~-~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~ 285 (466)
+..+++++++++++|.+ +.++ +++|++|+.+++.+++++| .+++....|+.......... .+|.++..++..+-
T Consensus 78 ~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~g 155 (398)
T 2fyf_A 78 NLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKN-PFVGEPIIITSDPG 155 (398)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHC-TTSCCCEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHh-CCCCceEEEecCCC
Confidence 35788999999999974 3455 5777799999999999887 23334444432111111111 12555545432210
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccccccccCc
Q 012321 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDV 365 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~lgG~gdv 365 (466)
......+++ ++++|++++|+||||.+.|+++|.++ +|+++|+|++++.+.....+. ++|+++.|+||+++++++
T Consensus 156 ~~~~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~-~~di~~~s~sK~~~~~gg- 229 (398)
T 2fyf_A 156 SAPEPQTDP-SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIA-ETDAYYFAPQKNFASDGG- 229 (398)
T ss_dssp CCCCCCCCT-TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGG-GCSEEEECTTSTTCSCSS-
T ss_pred CCCCccccC-CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcc-cCcEEEEecCcccCCCCc-
Confidence 000112555 48999999999999999999988887 899999999987654321222 489999999999998863
Q ss_pred eEEEEEeChHHHHHHHHHHH---------------------HhCCCchHHHHHHHHHhhHH------HHHHHHHHHHHHH
Q 012321 366 LAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (466)
Q Consensus 366 ~gG~vvg~~eli~~l~~~~~---------------------~~G~~ls~~~A~l~lrgL~t------l~~R~e~~~~na~ 418 (466)
.|+++++++++++++.... ....+.+....+.+...++. ++.+.++..++++
T Consensus 230 -~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~ 308 (398)
T 2fyf_A 230 -LWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQ 308 (398)
T ss_dssp -EEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred -eEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 5889999998887754310 00122333332222223322 5566778888999
Q ss_pred HHHHHHHcCCCcE
Q 012321 419 RMAKILEAHPKVK 431 (466)
Q Consensus 419 ~La~~L~~~p~V~ 431 (466)
++.+.|++.|+++
T Consensus 309 ~l~~~L~~~~g~~ 321 (398)
T 2fyf_A 309 RLYSWAQERPYTT 321 (398)
T ss_dssp HHHHHHHHSTTEE
T ss_pred HHHHHHHHcCCce
Confidence 9999999987664
No 212
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.71 E-value=4.9e-16 Score=160.38 Aligned_cols=225 Identities=13% Similarity=0.118 Sum_probs=141.7
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCccchHHHHHhhccc---
Q 012321 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVLPK--- 272 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all--------~pGD~VLv~~~~y~~t~~~~~~~l~~--- 272 (466)
++.++...+|+++|+++++. ++++++++|++|+..++..++ ..+|+||+.++.|++........-..
T Consensus 68 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 147 (430)
T 3i4j_A 68 QFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGAR 147 (430)
T ss_dssp TCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-----------------
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCcccc
Confidence 56788999999999999864 677788888999999998876 34789999999998744221111000
Q ss_pred ------CCc--EEEEeCCC--------CHHHHHHhccC---CCceEEEEeCCCC-CCccccc----HHHHHHHHHhcCCE
Q 012321 273 ------MGI--TATVIDPA--------DMEGLEAALNN---NNVSLFFTESPTN-PFLRCVD----VKLVSDLCHKKGAI 328 (466)
Q Consensus 273 ------~gi--~v~~vd~~--------D~e~Le~ai~~---~~tklV~lesPsN-PtG~v~d----l~~I~ela~~~gil 328 (466)
... .+..++.. |+++|++++++ +++++|+++.++| ++|.+.+ +++|.++|++||++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 227 (430)
T 3i4j_A 148 RELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGII 227 (430)
T ss_dssp --------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCE
T ss_pred ccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000 22223332 44888888862 3478888877777 8888776 99999999999999
Q ss_pred EEEeCCCCCCC----c--cchh-ccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHH----HHHhCCCchHHHHH
Q 012321 329 VCIDGTFATPL----N--QKAL-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVLGGALNPNAAY 397 (466)
Q Consensus 329 lIvD~t~a~~~----~--~~pl-~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~----~~~~G~~ls~~~A~ 397 (466)
||+||+|.... . .... ....|++ +++|.+++ |-.+.|++++++++++.++.. ........+++.+.
T Consensus 228 li~DEv~~~~~~~g~~~~~~~~~~~~~di~--t~sK~l~~-G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~a 304 (430)
T 3i4j_A 228 FIADEVMSGMGRCGSPLALSRWSGVTPDIA--VLGKGLAA-GYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVA 304 (430)
T ss_dssp EEEECTTTTTTTTSSSSGGGGTTTCCCSEE--EECGGGTT-TSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHH
T ss_pred EEEechhhCCCcccchhhhhhhcCCCCcEE--EEcccccC-CccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHH
Confidence 99999986421 1 1111 2234665 57899986 413568889999999988763 22122334566555
Q ss_pred HHHHhhHHHH--HHHHHHHHHHHHHHHHH----HcCCCcEEE
Q 012321 398 LIIRGMKTLH--LRVQQQNSTALRMAKIL----EAHPKVKRV 433 (466)
Q Consensus 398 l~lrgL~tl~--~R~e~~~~na~~La~~L----~~~p~V~~V 433 (466)
.++..++.+. ..+++..++.+++.+.| +++|.+..+
T Consensus 305 aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 346 (430)
T 3i4j_A 305 AGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQV 346 (430)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 5555554332 23444455554444444 456765543
No 213
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.71 E-value=6.9e-16 Score=159.24 Aligned_cols=218 Identities=11% Similarity=0.127 Sum_probs=143.8
Q ss_pred CCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc----------
Q 012321 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL---------- 270 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l---------- 270 (466)
..+.++...+|+++|+++++. ++++++++|++|+..++..+. ..+|+||+.++.|++.........
T Consensus 80 ~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 159 (433)
T 1zod_A 80 SEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGP 159 (433)
T ss_dssp TTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCC
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCC
Confidence 455678889999999999974 667777888999999987653 346899999999977432221110
Q ss_pred ccCCcEEEEeCC------C---------CHHHHHHhccC---CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCE
Q 012321 271 PKMGITATVIDP------A---------DMEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (466)
Q Consensus 271 ~~~gi~v~~vd~------~---------D~e~Le~ai~~---~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gil 328 (466)
...++....++. . |+++|++++++ .++++|+++..+||+|.+.+ +++|.++|++||++
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 239 (433)
T 1zod_A 160 AAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGML 239 (433)
T ss_dssp CCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCE
T ss_pred CCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCE
Confidence 011443332221 1 48899998863 34788887655688997665 99999999999999
Q ss_pred EEEeCCCCCCC-cc-----chhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHH--hCCCchHHHHHHHH
Q 012321 329 VCIDGTFATPL-NQ-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLII 400 (466)
Q Consensus 329 lIvD~t~a~~~-~~-----~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~--~G~~ls~~~A~l~l 400 (466)
||+||+|.... .. .......|++ |++|.+++ | ...|++++++++++.++..... .....++..+..++
T Consensus 240 li~DEv~~~~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G-~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~ 315 (433)
T 1zod_A 240 LILDEAQTGVGRTGTMFACQRDGVTPDIL--TLSKTLGA-G-LPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGL 315 (433)
T ss_dssp EEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECHHHHT-T-SSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHH
T ss_pred EEEeccccCCCcCchHhHHhhcCCCCCEE--EecccccC-C-CCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHH
Confidence 99999987321 11 1122335654 78899997 4 4678999999998888653211 11223555554444
Q ss_pred HhhHHHH--HHHHHHHHHHHHHHHHHHc
Q 012321 401 RGMKTLH--LRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 401 rgL~tl~--~R~e~~~~na~~La~~L~~ 426 (466)
..++.+. ..+++..++.+.+.+.|++
T Consensus 316 aal~~~~~~~~~~~~~~~~~~l~~~l~~ 343 (433)
T 1zod_A 316 RVLDVVQRDGLVARANVMGDRLRRGLLD 343 (433)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 4444332 2345566666666666654
No 214
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.71 E-value=5.5e-16 Score=161.37 Aligned_cols=225 Identities=13% Similarity=0.176 Sum_probs=148.5
Q ss_pred CCCCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHhc-----c---CCCEEEEcCCCccchHHHHHhhc-----
Q 012321 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALV-----P---AGGHIVTTTDCYRKTRIFIETVL----- 270 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g~-e~~v~~~SG~aAi~~al~all-----~---pGD~VLv~~~~y~~t~~~~~~~l----- 270 (466)
..+.++...+|+++|+++.+. .+++++++|++|+..++..+. . ++|+||+.++.|++........-
T Consensus 86 ~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 165 (452)
T 3n5m_A 86 MSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQR 165 (452)
T ss_dssp TTSEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGG
T ss_pred cccCCHHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhh
Confidence 456788899999999999875 237777888999999998876 4 78999999999987432221110
Q ss_pred ----ccCCcEEEEeCC--------CC---------HHHHHHhcc---CCCceEEEEeCC-CCCCccccc----HHHHHHH
Q 012321 271 ----PKMGITATVIDP--------AD---------MEGLEAALN---NNNVSLFFTESP-TNPFLRCVD----VKLVSDL 321 (466)
Q Consensus 271 ----~~~gi~v~~vd~--------~D---------~e~Le~ai~---~~~tklV~lesP-sNPtG~v~d----l~~I~el 321 (466)
......+..++. .| +++|+++++ +.++++|++|.+ +| +|.+.+ +++|.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l 244 (452)
T 3n5m_A 166 RYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHET 244 (452)
T ss_dssp TTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHH
T ss_pred ccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHH
Confidence 011112333332 23 899999987 234899999998 89 998876 9999999
Q ss_pred HHhcCCEEEEeCCCCCC----Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHH---HH---HHhCC
Q 012321 322 CHKKGAIVCIDGTFATP----LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LH---HVLGG 389 (466)
Q Consensus 322 a~~~gillIvD~t~a~~----~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~---~~---~~~G~ 389 (466)
|++||++||+||+|... .. ........|++ +++|.+++ |-...|++++++++++.++. .. .....
T Consensus 245 ~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~-G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~ 321 (452)
T 3n5m_A 245 CQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDII--TMAKGITS-AYLPLSATAVKREIYEAFKGKGEYEFFRHINTF 321 (452)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSS
T ss_pred HHHcCCEEEEecchhCCCcccccchhhhcCCCCCEE--eecccccC-CCcceEEEEECHHHHHHHhhccCCCCccccCCC
Confidence 99999999999997632 11 11122234665 57899987 41346888899998887743 11 11122
Q ss_pred CchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHH----HcCCCcEEE
Q 012321 390 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKIL----EAHPKVKRV 433 (466)
Q Consensus 390 ~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~La~~L----~~~p~V~~V 433 (466)
..+++.+..++..++.+. ..+++..++.+++.+.| .++|.+..+
T Consensus 322 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 371 (452)
T 3n5m_A 322 GGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDI 371 (452)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 345666555555555432 23455555555555554 455665544
No 215
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.70 E-value=4.4e-16 Score=160.84 Aligned_cols=216 Identities=16% Similarity=0.156 Sum_probs=142.8
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHH----------hhcccC
Q 012321 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIE----------TVLPKM 273 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g-~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~----------~~l~~~ 273 (466)
+.++...+|+++|+++.+ .+.+++++||++|+..++.... ..+++||+.++.|++...... ......
T Consensus 90 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 169 (429)
T 4e77_A 90 APTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSP 169 (429)
T ss_dssp SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCT
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcC
Confidence 567899999999999984 5778888999999999987543 467889999999887542110 000011
Q ss_pred C------cEEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC---
Q 012321 274 G------ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (466)
Q Consensus 274 g------i~v~~vd~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~--- 338 (466)
+ ..+..++..|+++|++++++ .++++|+++..++.+|.+.+ +++|.++|++||++||+||+|...
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g 249 (429)
T 4e77_A 170 GVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVA 249 (429)
T ss_dssp TSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTB
T ss_pred CCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccC
Confidence 1 13445566689999999873 24777777554455677777 999999999999999999998732
Q ss_pred Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH---HHhCCCchHHHHHHHHHhhHHH--HHHHH
Q 012321 339 LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTL--HLRVQ 411 (466)
Q Consensus 339 ~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~---~~~G~~ls~~~A~l~lrgL~tl--~~R~e 411 (466)
.. ........|++ |++|.+++ | ..+|++++++++++.++... .......++..+..++..++.+ +..++
T Consensus 250 ~~~~~~~~~~~pdi~--t~sK~~~~-G-~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 325 (429)
T 4e77_A 250 LAGAQDYYHVIPDLT--CLGKIIGG-G-MPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYE 325 (429)
T ss_dssp TTCHHHHTTCCCSEE--EEEGGGGT-T-SCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHH
T ss_pred cchHHHhcCCCCCee--eecccccC-C-CCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 11 11222334664 78899985 4 46789999999888765421 1111245666666655555543 33455
Q ss_pred HHHHHHHHHHHHHHc
Q 012321 412 QQNSTALRMAKILEA 426 (466)
Q Consensus 412 ~~~~na~~La~~L~~ 426 (466)
+..++.+++.+.|++
T Consensus 326 ~~~~~~~~l~~~L~~ 340 (429)
T 4e77_A 326 TLTELTDSLATGLRH 340 (429)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 556666666665554
No 216
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.69 E-value=1.9e-15 Score=158.04 Aligned_cols=228 Identities=13% Similarity=0.086 Sum_probs=144.5
Q ss_pred CccCCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhh-------
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV------- 269 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g---~e~~v~~~SG~aAi~~al~all~--pGD~VLv~~~~y~~t~~~~~~~------- 269 (466)
|.+.++.++...+|+++|+++.+ .+++++++||++|+..++..... .+++|++.++.|++........
T Consensus 96 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~ 175 (451)
T 3oks_A 96 TCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPY 175 (451)
T ss_dssp CTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTT
T ss_pred ccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCccc
Confidence 44556788899999999999986 35788889999999999976653 4589999999998744322111
Q ss_pred ---cccCCcEEEEeCCC------------------CHHHHHHhc----cCCCceEEEEeCCCCCCccccc----HHHHHH
Q 012321 270 ---LPKMGITATVIDPA------------------DMEGLEAAL----NNNNVSLFFTESPTNPFLRCVD----VKLVSD 320 (466)
Q Consensus 270 ---l~~~gi~v~~vd~~------------------D~e~Le~ai----~~~~tklV~lesPsNPtG~v~d----l~~I~e 320 (466)
.......+..++.. +++.+++.+ .++++++|++|..++..|.+.+ +++|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~ 255 (451)
T 3oks_A 176 KDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLD 255 (451)
T ss_dssp TTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHH
T ss_pred ccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHH
Confidence 01111133344322 233333333 3334677777655555566655 999999
Q ss_pred HHHhcCCEEEEeCCCCCCC------ccchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHH
Q 012321 321 LCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (466)
Q Consensus 321 la~~~gillIvD~t~a~~~------~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~ 394 (466)
+|++||++||+||+|.... .........|++ +++|.+++ | .+.|++++++++++.++..........+++
T Consensus 256 l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~-G-~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~ 331 (451)
T 3oks_A 256 WCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI--VTAKGIAG-G-LPLSAVTGRAEIMDSPHVSGLGGTYGGNPI 331 (451)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHTCSCTTSBCCSSSSCHH
T ss_pred HHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee--eehhhhhC-C-cceEEEEECHHHHhhhcCCCcCCCCCCCHH
Confidence 9999999999999986321 112222335666 77899987 5 456888899998887754433333345666
Q ss_pred HHHHHHHhhHHHH--HHHHHHHHHHHHHHHHH----HcCCCcEEE
Q 012321 395 AAYLIIRGMKTLH--LRVQQQNSTALRMAKIL----EAHPKVKRV 433 (466)
Q Consensus 395 ~A~l~lrgL~tl~--~R~e~~~~na~~La~~L----~~~p~V~~V 433 (466)
.+..++..++.+. ..+++..++.+++.+.| .++|.+..+
T Consensus 332 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 376 (451)
T 3oks_A 332 ACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDV 376 (451)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 6666555555432 23444555555555444 456665443
No 217
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.69 E-value=4.5e-16 Score=160.53 Aligned_cols=216 Identities=17% Similarity=0.199 Sum_probs=145.6
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHH----------hhcccC
Q 012321 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIE----------TVLPKM 273 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g-~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~----------~~l~~~ 273 (466)
+.++...+|+++++++++ .++++++++|++|+..++.... ..+++||+.++.|++...... ......
T Consensus 89 ~~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 168 (427)
T 3fq8_A 89 APCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSP 168 (427)
T ss_dssp SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCS
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCC
Confidence 378889999999999985 5678888899999999885332 345889999989876321110 000011
Q ss_pred Cc------EEEEeCCCCHHHHHHhccCC--CceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC---
Q 012321 274 GI------TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (466)
Q Consensus 274 gi------~v~~vd~~D~e~Le~ai~~~--~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~--- 338 (466)
++ .+..++..|+++|++++++. ++++|+++.++|++|.+.+ +++|.++|++||++||+||+|...
T Consensus 169 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g 248 (427)
T 3fq8_A 169 GVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIA 248 (427)
T ss_dssp SSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTB
T ss_pred CCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 11 24445556899999998752 4899999988889999988 999999999999999999998733
Q ss_pred Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH-HhCC--CchHHHHHHHHHhhHHH--HHHHH
Q 012321 339 LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGG--ALNPNAAYLIIRGMKTL--HLRVQ 411 (466)
Q Consensus 339 ~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~-~~G~--~ls~~~A~l~lrgL~tl--~~R~e 411 (466)
.. ........|+ .|++|.+++ | .++|++++++++++.++.... ..+. ..++..+..++..++.+ +..++
T Consensus 249 ~~~~~~~~~~~~di--~t~sK~~~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~ 324 (427)
T 3fq8_A 249 YGGVQEKFGVTPDL--TTLGKIIGG-G-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYE 324 (427)
T ss_dssp TTHHHHHTTCCCSE--EEECGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHH
T ss_pred cchhhHhcCCCCCh--hhhhhhhhC-C-cceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHH
Confidence 11 1112223465 467799995 4 467899999999887764221 1222 23666665555555433 23455
Q ss_pred HHHHHHHHHHHHHHc
Q 012321 412 QQNSTALRMAKILEA 426 (466)
Q Consensus 412 ~~~~na~~La~~L~~ 426 (466)
+..++.+++.+.|++
T Consensus 325 ~~~~~~~~~~~~l~~ 339 (427)
T 3fq8_A 325 YLDQITKRLSDGLLA 339 (427)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 556666666655554
No 218
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.69 E-value=2.8e-16 Score=162.46 Aligned_cols=216 Identities=16% Similarity=0.178 Sum_probs=146.3
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCccchHHHHHhh---------cc-cC
Q 012321 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV---------LP-KM 273 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~-g~e~~v~~~SG~aAi~~al~all~--pGD~VLv~~~~y~~t~~~~~~~---------l~-~~ 273 (466)
+.++...+|+++|++++ +.+++++++||++|+..++..+.. ++++|++.++.|++........ .. ..
T Consensus 90 ~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 169 (429)
T 3k28_A 90 APTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSP 169 (429)
T ss_dssp SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCT
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcC
Confidence 56888999999999998 457788888999999999887653 6789999999887632111000 00 00
Q ss_pred Cc------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCC--
Q 012321 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL-- 339 (466)
Q Consensus 274 gi------~v~~vd~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~-- 339 (466)
++ ++..++..|+++|++++++ .++++|++|.++|++|.+.+ +++|.++|++||++||+||+|....
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g 249 (429)
T 3k28_A 170 GVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVA 249 (429)
T ss_dssp TCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSS
T ss_pred CCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 11 2334445589999998862 24788888877777888887 9999999999999999999986431
Q ss_pred -c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHH-hC--CCchHHHHHHHHHhhHHH-HHHHHH
Q 012321 340 -N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-LG--GALNPNAAYLIIRGMKTL-HLRVQQ 412 (466)
Q Consensus 340 -~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~-~G--~~ls~~~A~l~lrgL~tl-~~R~e~ 412 (466)
. ........|++ +++|.+++ | ...|++++++++++.++..... .+ ...+++.+..++..++.+ +..+++
T Consensus 250 ~~~~~~~~~~~~di~--t~sK~~~~-G-~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~ 325 (429)
T 3k28_A 250 YNCGQGYYGVTPDLT--CLGKVIGG-G-LPVGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESYVE 325 (429)
T ss_dssp TTHHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHHHH
T ss_pred cchHHHHhCCCCcee--hhhhhhcC-C-CCeEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 1 11122234554 67899976 4 4578999999998876542211 11 234555555544444422 445666
Q ss_pred HHHHHHHHHHHHHc
Q 012321 413 QNSTALRMAKILEA 426 (466)
Q Consensus 413 ~~~na~~La~~L~~ 426 (466)
..++.+++.+.|++
T Consensus 326 ~~~~~~~l~~~L~~ 339 (429)
T 3k28_A 326 FERKAEMLEAGLRK 339 (429)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 67777777776665
No 219
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.69 E-value=1.2e-15 Score=160.96 Aligned_cols=228 Identities=14% Similarity=0.163 Sum_probs=152.1
Q ss_pred CccCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCccchHHHHHhh--
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 269 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all~--------pGD~VLv~~~~y~~t~~~~~~~-- 269 (466)
+.+.++.++...+|+++|+++.+. +.+++++||++|+..++..+.. ++++||+.++.|.+........
T Consensus 91 ~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~ 170 (472)
T 3hmu_A 91 NTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGG 170 (472)
T ss_dssp CSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccC
Confidence 344567788999999999999853 6788889999999999988764 4689999999998743221111
Q ss_pred -------cccCCcEEEEeCCC---------C--------HHHHHHhccC---CCceEEEEeCCCCCCccccc----HHHH
Q 012321 270 -------LPKMGITATVIDPA---------D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLV 318 (466)
Q Consensus 270 -------l~~~gi~v~~vd~~---------D--------~e~Le~ai~~---~~tklV~lesPsNPtG~v~d----l~~I 318 (466)
+. ....+..++.. | +++|++.+++ .++++|++|.++|++|.+.+ +++|
T Consensus 171 ~~~~~~~~~-~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l 249 (472)
T 3hmu_A 171 MAGMHAQSG-LIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEI 249 (472)
T ss_dssp CHHHHHTTC-CCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHH
T ss_pred ChhhccccC-CCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHH
Confidence 11 11122233311 2 7888888862 24899999988888898886 9999
Q ss_pred HHHHHhcCCEEEEeCCCCCC-C---c--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhC--CC
Q 012321 319 SDLCHKKGAIVCIDGTFATP-L---N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--GA 390 (466)
Q Consensus 319 ~ela~~~gillIvD~t~a~~-~---~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G--~~ 390 (466)
.++|+++|++||+||+|... . . ........|+++ ++|.++|.+. ..|++++++++++.+.......+ ..
T Consensus 250 ~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t--~sK~l~gg~~-plG~v~~~~~i~~~~~~~~~~~~~t~~ 326 (472)
T 3hmu_A 250 QRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMT--IAKGLSSGYA-PIGGSIVCDEVAHVIGKDEFNHGYTYS 326 (472)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEE--ECGGGTTTSS-CCEEEEEEHHHHHHHTTSCBCCCCTTT
T ss_pred HHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceee--echhhhcCCc-ceEEEEECHHHHHhcccCCccccCCCC
Confidence 99999999999999998632 1 1 112223457775 6799987543 45888889999988732111112 23
Q ss_pred chHHHHHHHHHhhHHHH--HHHHHHH-HHHHHHHHHHHc---CCCcEEE
Q 012321 391 LNPNAAYLIIRGMKTLH--LRVQQQN-STALRMAKILEA---HPKVKRV 433 (466)
Q Consensus 391 ls~~~A~l~lrgL~tl~--~R~e~~~-~na~~La~~L~~---~p~V~~V 433 (466)
.++..+..++..|+.+. ..+++.. ++.+++.+.|++ +|.+..|
T Consensus 327 ~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v 375 (472)
T 3hmu_A 327 GHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEA 375 (472)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEE
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 45666665555555442 2355566 666677776654 4555443
No 220
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.68 E-value=9e-16 Score=158.27 Aligned_cols=214 Identities=18% Similarity=0.160 Sum_probs=145.7
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHH--hccCCCEEEEcCCCccchHHHHHhhc----------ccC
Q 012321 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLA--LVPAGGHIVTTTDCYRKTRIFIETVL----------PKM 273 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~-g~e~~v~~~SG~aAi~~al~a--ll~pGD~VLv~~~~y~~t~~~~~~~l----------~~~ 273 (466)
+.++...+|+++|++++ +.+++++++||++|+..++.. .+..+|+||+.++.|++......... ...
T Consensus 89 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~ 168 (424)
T 2e7u_A 89 APSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSA 168 (424)
T ss_dssp SCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESST
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCC
Confidence 56788999999999998 567788889999999998875 24456889999999987432110000 012
Q ss_pred Cc------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCC-CCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc
Q 012321 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTN-PFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN 340 (466)
Q Consensus 274 gi------~v~~vd~~D~e~Le~ai~~--~~tklV~lesPsN-PtG~v~d----l~~I~ela~~~gillIvD~t~a~~~~ 340 (466)
|+ ++..++..|+++|++++++ .++++|++ +|+| ++|.+.+ +++|.++ ++||++||+||+|.....
T Consensus 169 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~-ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~ 246 (424)
T 2e7u_A 169 GVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIF-EPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRL 246 (424)
T ss_dssp TCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEE-CSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTS
T ss_pred CCCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEE-eCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccccc
Confidence 32 3445566789999998863 23677777 5555 4898887 9999999 999999999999874311
Q ss_pred cc-----hhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHH-HhC--CCchHHHHHHHHHhhHHH---HHH
Q 012321 341 QK-----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTL---HLR 409 (466)
Q Consensus 341 ~~-----pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~-~~G--~~ls~~~A~l~lrgL~tl---~~R 409 (466)
.. ......|++ |++|.+++ | ..+|++++++++++.++.... ..+ ...++..+..++..++.+ +..
T Consensus 247 g~~~~~~~~~~~~di~--s~sK~l~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 322 (424)
T 2e7u_A 247 AFGGATELLGLKPDLV--TLGKILGG-G-LPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGY 322 (424)
T ss_dssp STTHHHHHHTCCCSEE--EECGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHH
T ss_pred chhHHHHHhCCCcchh--hhhhhhhC-C-cceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 11 112235765 88999996 4 457999999998877654211 111 134566555555555544 335
Q ss_pred HHHHHHHHHHHHHHHHc
Q 012321 410 VQQQNSTALRMAKILEA 426 (466)
Q Consensus 410 ~e~~~~na~~La~~L~~ 426 (466)
.++..++.+++.+.|++
T Consensus 323 ~~~~~~~~~~l~~~L~~ 339 (424)
T 2e7u_A 323 YAYLEDLGARLEAGLKE 339 (424)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66677777777777765
No 221
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.68 E-value=4.6e-15 Score=156.49 Aligned_cols=229 Identities=13% Similarity=0.132 Sum_probs=153.5
Q ss_pred CccC-CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCccchHHHHHhh-
Q 012321 202 FEYG-RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV- 269 (466)
Q Consensus 202 ~~Y~-R~~~p~~~~Lee~lA~l~g--~e~~v~~~SG~aAi~~al~all~--------pGD~VLv~~~~y~~t~~~~~~~- 269 (466)
+.++ .+.++...+|+++|+++.+ .+.+++++||++|+..++..+.. .+++||+.++.|++........
T Consensus 88 ~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~ 167 (476)
T 3i5t_A 88 YASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACT 167 (476)
T ss_dssp CCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTC
T ss_pred CcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhcccc
Confidence 3344 5778899999999999985 47788889999999999988763 3679999999998744222111
Q ss_pred --------cccCCcEEEEeCC--------CC--------HHHHHHhccC---CCceEEEEeCCCCCCccccc----HHHH
Q 012321 270 --------LPKMGITATVIDP--------AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLV 318 (466)
Q Consensus 270 --------l~~~gi~v~~vd~--------~D--------~e~Le~ai~~---~~tklV~lesPsNPtG~v~d----l~~I 318 (466)
.....-.+.+++. .| +++|++.+++ .++++|++|.++|++|.+.+ +++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l 247 (476)
T 3i5t_A 168 GRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARF 247 (476)
T ss_dssp CCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHH
T ss_pred CChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHH
Confidence 0001112233331 11 7788888862 34899999999999987654 9999
Q ss_pred HHHHHhcCCEEEEeCCCCCC----Cc--cc-hhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHH-------
Q 012321 319 SDLCHKKGAIVCIDGTFATP----LN--QK-ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH------- 384 (466)
Q Consensus 319 ~ela~~~gillIvD~t~a~~----~~--~~-pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~------- 384 (466)
.++|+++|++||+||++... .. .. ......|+++ ++|.+++ |-...|++++++++++.+....
T Consensus 248 ~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t--~sK~l~~-G~~plg~v~~~~~i~~~~~~~~~~~~~~~ 324 (476)
T 3i5t_A 248 KAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIIT--FAKGVTS-GYVPLGGLAISEAVLARISGENAKGSWFT 324 (476)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEE--ECGGGGT-TSSCCEEEEECHHHHHTTSGGGCTTCEEC
T ss_pred HHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhh--hhhhhcC-CCcCeEEEEECHHHHHHHhcCCccccccc
Confidence 99999999999999998642 11 11 2222357764 6799987 3134688889999988876431
Q ss_pred HHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHc---CCCcEEE
Q 012321 385 HVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA---HPKVKRV 433 (466)
Q Consensus 385 ~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~La~~L~~---~p~V~~V 433 (466)
.......+++.+..++..|+.+. ..+++..++.+++.+.|++ +|.+..+
T Consensus 325 ~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v 378 (476)
T 3i5t_A 325 NGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAET 378 (476)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEE
T ss_pred ccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 11122346666666555565443 3456667777777777765 3545443
No 222
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.67 E-value=2.6e-15 Score=157.13 Aligned_cols=227 Identities=12% Similarity=0.104 Sum_probs=143.0
Q ss_pred CccCCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhc------
Q 012321 202 FEYGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL------ 270 (466)
Q Consensus 202 ~~Y~R~~~p~~~~Lee~lA~l~g---~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l------ 270 (466)
|.+.++.++...+|+++|+++.+ .+++++++||++|+..++.... ..+++||+.++.|++........-
T Consensus 99 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 178 (453)
T 4ffc_A 99 TCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPY 178 (453)
T ss_dssp CTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTT
T ss_pred cccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCccc
Confidence 45566788999999999999986 3578888999999999997654 355899999999987443222110
Q ss_pred ----ccCCcEEEEeCCC----C-------------HHHHHHhccCCCceEEEEeCCCCCC-ccccc----HHHHHHHHHh
Q 012321 271 ----PKMGITATVIDPA----D-------------MEGLEAALNNNNVSLFFTESPTNPF-LRCVD----VKLVSDLCHK 324 (466)
Q Consensus 271 ----~~~gi~v~~vd~~----D-------------~e~Le~ai~~~~tklV~lesPsNPt-G~v~d----l~~I~ela~~ 324 (466)
......+..++.. | ++.|++.+.++++++|++ .|.|++ |.+.+ +++|.++|++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~-ep~~~~gG~~~~~~~~l~~l~~l~~~ 257 (453)
T 4ffc_A 179 KSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIII-EPIQGEGGFIVPAPGFLATLTAWASE 257 (453)
T ss_dssp TTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEE-CSSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred ccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEE-cCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 0111123333322 2 366777775543566666 556555 55554 9999999999
Q ss_pred cCCEEEEeCCCCCC-Cc-----cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHH
Q 012321 325 KGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 398 (466)
Q Consensus 325 ~gillIvD~t~a~~-~~-----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l 398 (466)
||++||+||+|... .. ........|++ +++|.+++ | ...|++++++++++.+...........++..+..
T Consensus 258 ~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~--t~sK~~~~-G-~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aa 333 (453)
T 4ffc_A 258 NGVVFIADEVQTGFARTGAWFASEHEGIVPDIV--TMAKGIAG-G-MPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAA 333 (453)
T ss_dssp HTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHH
T ss_pred cCCEEEEecCccCCCcccccchhhhcCCCcchH--hhhhhhcC-C-cCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHH
Confidence 99999999998632 11 11122234555 57899987 5 4568889999988877644332223345666555
Q ss_pred HHHhhHHHH--HHHHHHHHHHHHHHHH----HHcCCCcEEE
Q 012321 399 IIRGMKTLH--LRVQQQNSTALRMAKI----LEAHPKVKRV 433 (466)
Q Consensus 399 ~lrgL~tl~--~R~e~~~~na~~La~~----L~~~p~V~~V 433 (466)
++..++.+. ..+++..++.+++.+. ++++|.+..+
T Consensus 334 a~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 374 (453)
T 4ffc_A 334 AVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV 374 (453)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 555554332 2344444444444444 4456665443
No 223
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.66 E-value=2.5e-15 Score=156.92 Aligned_cols=214 Identities=12% Similarity=0.086 Sum_probs=139.8
Q ss_pred CCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhc---c-----------CCCEEEEcCCCccchHHHH-
Q 012321 205 GRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV---P-----------AGGHIVTTTDCYRKTRIFI- 266 (466)
Q Consensus 205 ~R~~~p~~~~Lee~lA~l~g---~e~~v~~~SG~aAi~~al~all---~-----------pGD~VLv~~~~y~~t~~~~- 266 (466)
.++.++...+++++|+++++ .+++++++||++|+..++..+. . +||+||+.++.|++.....
T Consensus 96 ~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~ 175 (449)
T 2cjg_A 96 SDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTL 175 (449)
T ss_dssp TTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGG
T ss_pred cccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchh
Confidence 45677889999999999985 3677888889999999887543 2 2899999999998743211
Q ss_pred ---------HhhcccCCcEEEEeCCCC---------------HHHHHHhcc--CCCceEEEEeCCCCCCccccc----HH
Q 012321 267 ---------ETVLPKMGITATVIDPAD---------------MEGLEAALN--NNNVSLFFTESPTNPFLRCVD----VK 316 (466)
Q Consensus 267 ---------~~~l~~~gi~v~~vd~~D---------------~e~Le~ai~--~~~tklV~lesPsNPtG~v~d----l~ 316 (466)
..........+.+++..| +++|+++++ ..++++|++|.++||+|.+.+ ++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~ 255 (449)
T 2cjg_A 176 SLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFA 255 (449)
T ss_dssp GTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHH
T ss_pred hhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHH
Confidence 011111112445555444 234888885 135899998877799997666 99
Q ss_pred HHHHHHHhcCCEEEEeCCCCCC-Cc-----cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHH-----HHH
Q 012321 317 LVSDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-----LHH 385 (466)
Q Consensus 317 ~I~ela~~~gillIvD~t~a~~-~~-----~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~-----~~~ 385 (466)
+|.++|++||++||+||+|... .. ........|++ +++|++ + .|++++++++++.+.. ...
T Consensus 256 ~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l--~----iG~~~~~~~~~~~l~~~~~~~~~~ 327 (449)
T 2cjg_A 256 AMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV--AFGKKT--Q----VCGVMAGRRVDEVADNVFAVPSRL 327 (449)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGG--S----SEEEEECGGGGGSTTCTTTSTTSS
T ss_pred HHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEE--EecCcc--c----EEEEEECHHHhhhhhhcccCCccc
Confidence 9999999999999999998732 11 12223345765 678998 2 4777788888765321 111
Q ss_pred HhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHc
Q 012321 386 VLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 386 ~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~La~~L~~ 426 (466)
......++..+..++..++.+. ...++..++.+++.+.|++
T Consensus 328 ~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 370 (449)
T 2cjg_A 328 NSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDE 370 (449)
T ss_dssp CCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 1112235555555444454332 3455667777777777764
No 224
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.63 E-value=3.5e-14 Score=147.99 Aligned_cols=236 Identities=15% Similarity=0.080 Sum_probs=142.0
Q ss_pred cCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhh-CC----C--cEEEeCCHHHHHHHHHH----HhccCCCEEE
Q 012321 185 FKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALE-GA----E--STVIMASGMSASTVMLL----ALVPAGGHIV 253 (466)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~-g~----e--~~v~~~SG~aAi~~al~----all~pGD~VL 253 (466)
++.+.+...........+.|.- ..-..+|++.++++. |. + ..+-+.+|+.|+..++. .++.|||+|+
T Consensus 64 l~~Vk~A~~~~~~~~~~~~Y~p--~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ 141 (420)
T 4h51_A 64 LRVVRKAEQLLLDMNLDYEYLP--ISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIY 141 (420)
T ss_dssp CHHHHHHHHHHHHTTCCCCCCC--TTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEE
T ss_pred CHHHHHHHHHHhcCCCCCCCCC--cCChHHHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEE
Confidence 3444443333322233455663 334556777777653 32 1 23335566666655544 3457999999
Q ss_pred EcCCCccchHHHHHhhcccCCcE-EEE---eC----CCCHHHHHHhcc--CCCceEEEEeCCCCCCccccc---HHHHHH
Q 012321 254 TTTDCYRKTRIFIETVLPKMGIT-ATV---ID----PADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---VKLVSD 320 (466)
Q Consensus 254 v~~~~y~~t~~~~~~~l~~~gi~-v~~---vd----~~D~e~Le~ai~--~~~tklV~lesPsNPtG~v~d---l~~I~e 320 (466)
+++|.|+.....+. ..|.+ +.. .+ ..|.+.+.+.+. ..+++++++.+|+||||.+++ +++|++
T Consensus 142 ip~P~w~~y~~i~~----~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~ 217 (420)
T 4h51_A 142 LSDPTWPNHYGVVK----AAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIAS 217 (420)
T ss_dssp EEESCCTHHHHHHH----HTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHH
T ss_pred EecCCchhHHHHHH----HcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 99999998665443 33432 221 22 126666666553 224789999999999999985 678999
Q ss_pred HHHhcCCEEEEeCCCCCCCccc----h------hccC-CcEEEeccccccccccCceEEEEEeChHHHH-------HHHH
Q 012321 321 LCHKKGAIVCIDGTFATPLNQK----A------LSLG-ADLVLHSATKFIGGHNDVLAGSISGSGKLVT-------QIRN 382 (466)
Q Consensus 321 la~~~gillIvD~t~a~~~~~~----p------l~~g-aDivv~S~sK~lgG~gdv~gG~vvg~~eli~-------~l~~ 382 (466)
+|++++++++.|++|....... + .+.+ .-+++.|+||.++..|++ .|++++..+..+ .+..
T Consensus 218 ~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R-vG~~~~~~~~~~~~~~~~~~l~~ 296 (420)
T 4h51_A 218 LMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSER-AGTLSLLLKDKTKRADVKSVMDS 296 (420)
T ss_dssp HHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGC-EEEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCc-eEEEEecccCHHHHHHHHHHHHH
Confidence 9999999999999987543211 1 1112 248899999999999875 566665433222 2222
Q ss_pred HHHHhCCCchHHHHHHHHHhh----------HHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 383 LHHVLGGALNPNAAYLIIRGM----------KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 383 ~~~~~G~~ls~~~A~l~lrgL----------~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
.......+.+...+.++...+ +.+....+++.+.++.|.+.|++.
T Consensus 297 ~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~ 351 (420)
T 4h51_A 297 LIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRL 351 (420)
T ss_dssp HHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333444444444433222 233444556677788888888875
No 225
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.58 E-value=3.2e-14 Score=148.63 Aligned_cols=205 Identities=10% Similarity=0.101 Sum_probs=138.9
Q ss_pred HHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccC----CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------
Q 012321 216 EEKMSALEGAE---STVIMASGMSASTVMLLALVPA----GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (466)
Q Consensus 216 ee~lA~l~g~e---~~v~~~SG~aAi~~al~all~p----GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~------ 282 (466)
.++|..+ |.+ ..++++.++.++.+++++.+++ ||+||+++.+|.+.+..+ ...|++..++++
T Consensus 123 ld~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAl----iL~Gl~Pv~V~p~~d~~~ 197 (501)
T 3hl2_A 123 LDIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSM----ITAGFEPVVIENVLEGDE 197 (501)
T ss_dssp HHHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHH----HHTTCEEEEECEEEETTE
T ss_pred HHHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHH----HHcCCeEEEEeeeecccc
Confidence 4455555 653 3455555555666777777664 499999999999876544 334666666643
Q ss_pred --CCHHHHHHhccCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc------cchhccC-CcE
Q 012321 283 --ADMEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG-ADL 350 (466)
Q Consensus 283 --~D~e~Le~ai~~~---~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~------~~pl~~g-aDi 350 (466)
.|+++|+++|+++ .+.+|+.++++|..+.+.|+++|+++||+||++++|||+|+.... ...+..| +|+
T Consensus 198 ~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~ 277 (501)
T 3hl2_A 198 LRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDA 277 (501)
T ss_dssp EEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCE
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcE
Confidence 3789999998653 234444444455455778999999999999999999999987542 1234568 999
Q ss_pred EEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012321 351 VLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLII--RGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 351 vv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~~A~l~l--rgL~tl~~R~e~~~~na~~La~~L~~~ 427 (466)
++.|.||.+-.+- .||++.. ++++++++.......-+..+.++.|+++ .|.+-+...+++..++++++.+.|++.
T Consensus 278 vVqS~HK~llvpI--GG~ii~~~d~e~l~~~~~~yPGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~l 355 (501)
T 3hl2_A 278 FVQSLDKNFMVPV--GGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKL 355 (501)
T ss_dssp EEEEHHHHHCCCS--SCEEEEESCHHHHHHHHHTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccccceeec--CceEEEeCCHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987662 2344433 5677777643221111222334456554 356677888899999999999999874
No 226
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.36 E-value=1.2e-16 Score=168.71 Aligned_cols=216 Identities=14% Similarity=0.120 Sum_probs=145.9
Q ss_pred CCCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhhcccCCc--EEEEe
Q 012321 206 RYGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVI 280 (466)
Q Consensus 206 R~~~p~~~~Lee~lA~l~-g~e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~l~~~gi--~v~~v 280 (466)
++.++...+|+++|++++ +.+.+++++||++|+..++.... ..+|+||+.+..|.+.......-....|+ .+..+
T Consensus 136 ~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~ 215 (465)
T 2yky_A 136 STQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLG 215 (465)
Confidence 356788999999999999 67888899999999999987642 45689999999997733211100012244 33444
Q ss_pred CCCCHHHHHHhccC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCccchh---ccC--Cc
Q 012321 281 DPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQKAL---SLG--AD 349 (466)
Q Consensus 281 d~~D~e~Le~ai~~--~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~~~~~~pl---~~g--aD 349 (466)
+..|+++|++++++ .++++|++|.+.|++|.+.+ +++|.++|+++|++||+||++. .-..... ..| .|
T Consensus 216 ~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pD 294 (465)
T 2yky_A 216 VYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISAD 294 (465)
Confidence 55688999999973 25899999887777998776 9999999999999999999998 4211111 112 45
Q ss_pred EEEeccccccccccCceEEEEEeChHHHHHHHHH--H---HHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHH
Q 012321 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--H---HVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAK 422 (466)
Q Consensus 350 ivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~--~---~~~G~~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~La~ 422 (466)
+ .+++|++++ | ...|++++++++++.+... . .......++..+..++..|+.+. ...++..+..+++.+
T Consensus 295 i--~t~sK~lg~-G-~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~ 370 (465)
T 2yky_A 295 L--TTLGKYIGG-G-MSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRA 370 (465)
Confidence 4 478999998 4 4578999999999887651 1 11112234554444444444332 234455555666666
Q ss_pred HHHc
Q 012321 423 ILEA 426 (466)
Q Consensus 423 ~L~~ 426 (466)
.|++
T Consensus 371 ~L~~ 374 (465)
T 2yky_A 371 NLNR 374 (465)
Confidence 5554
No 227
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.57 E-value=5e-14 Score=147.64 Aligned_cols=211 Identities=11% Similarity=0.102 Sum_probs=142.1
Q ss_pred HHHHHHHHHhhhCCCc---EEEeCCHHHHHHHHHHHhccC----CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--
Q 012321 212 TVVVEEKMSALEGAES---TVIMASGMSASTVMLLALVPA----GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 212 ~~~Lee~lA~l~g~e~---~v~~~SG~aAi~~al~all~p----GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-- 282 (466)
.+.+..++.++.|.+. .+++++++..+.+++++.+++ ++.||+++.+|.+....+ ...|+...+++.
T Consensus 100 e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl----~l~Gl~p~~v~~~~ 175 (450)
T 3bc8_A 100 TNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSM----VTAGFEPVVIENVL 175 (450)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHH----HHTTCEEEEECCEE
T ss_pred HHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHH----HHcCCeeEEEEeee
Confidence 4455666667777642 366666664444455555444 899999999998876443 345666666643
Q ss_pred ------CCHHHHHHhccCCC--ceEEEEeCCCC-CCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc------chhcc-
Q 012321 283 ------ADMEGLEAALNNNN--VSLFFTESPTN-PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALSL- 346 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~--tklV~lesPsN-PtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~------~pl~~- 346 (466)
.|++.|+++|++++ .+++++.+|++ .+|.+.|+++|+++||+||++++||++|+..... ..+..
T Consensus 176 ~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~ 255 (450)
T 3bc8_A 176 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVG 255 (450)
T ss_dssp ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHS
T ss_pred cCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhccc
Confidence 38999999996521 34555556654 4568899999999999999999999999864322 12233
Q ss_pred CCcEEEeccccccccccCceEEEEEe-ChHHHHHHHHHHHHhCCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHH
Q 012321 347 GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 347 gaDivv~S~sK~lgG~gdv~gG~vvg-~~eli~~l~~~~~~~G~~ls~~~A~l~lr--gL~tl~~R~e~~~~na~~La~~ 423 (466)
++|+++.|+||++..+- .++++.. ++++++++...........+.+..|..+. |.+.+...+++..++++++.+.
T Consensus 256 ~AD~~v~S~HK~l~a~~--~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~ 333 (450)
T 3bc8_A 256 RIDAFVQSLDKNFMVPV--GGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQ 333 (450)
T ss_dssp CCCEEEEEHHHHHSCCS--SCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCccCCCchh--ccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999998875 3566664 56666655432211122333355554432 5556677778888999999999
Q ss_pred HHcCC
Q 012321 424 LEAHP 428 (466)
Q Consensus 424 L~~~p 428 (466)
|++.+
T Consensus 334 l~~~~ 338 (450)
T 3bc8_A 334 LKKLA 338 (450)
T ss_dssp HHHHH
T ss_pred HHhhH
Confidence 98766
No 228
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.51 E-value=2.6e-13 Score=141.21 Aligned_cols=222 Identities=18% Similarity=0.144 Sum_probs=143.3
Q ss_pred CCccCCC--CchhHHHH----HHHHHhhhCCCc-----EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHH--H
Q 012321 201 SFEYGRY--GNPTTVVV----EEKMSALEGAES-----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFI--E 267 (466)
Q Consensus 201 ~~~Y~R~--~~p~~~~L----ee~lA~l~g~e~-----~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~--~ 267 (466)
||.-.|| +....+.+ .++..+++|++. .|=--||+.|+.+++.++++|||+|+..+..+++....- .
T Consensus 85 GyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~ 164 (490)
T 3ou5_A 85 GYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMS 164 (490)
T ss_dssp C----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC-------------
T ss_pred CCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccC
Confidence 4444444 44555554 455677899865 355679999999999999999999999998888743211 0
Q ss_pred hh--cccCCcEEEE----eC----CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC--
Q 012321 268 TV--LPKMGITATV----ID----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-- 335 (466)
Q Consensus 268 ~~--l~~~gi~v~~----vd----~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~-- 335 (466)
.. ..-.|.-+.. +| ..|.+++++...+.++|+|++-.-. .-+..|.+++.++|++.|++|++|-++
T Consensus 165 ~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~Sa--Y~r~id~~~~reIAd~vGA~Lm~DmAHia 242 (490)
T 3ou5_A 165 DVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSA--YARLIDYARMREVCDEVKAHLLADMAHIS 242 (490)
T ss_dssp ---------------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCSS--CCSCCCHHHHHHHHHHHTCEEEEECGGGH
T ss_pred CCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCcc--CccccCHHHHHHHHhhcccEEEechhhhh
Confidence 00 0001111111 11 2488999988777679999984433 456789999999999999999999995
Q ss_pred ---CCCCccchhccCCcEEEeccccccccccCceEEEEEeCh---------------HHHHHHHHHHH--HhCCCch-HH
Q 012321 336 ---ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG---------------KLVTQIRNLHH--VLGGALN-PN 394 (466)
Q Consensus 336 ---a~~~~~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~---------------eli~~l~~~~~--~~G~~ls-~~ 394 (466)
+.+...+|+.+ +|+|..|.||+|.|| +||+|++++ ++.++|..... ..|+... ..
T Consensus 243 GLVA~g~~psP~~~-ADvVTtTTHKTLrGP---rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~I 318 (490)
T 3ou5_A 243 GLVAAKVIPSPFKH-ADIVTTTTHKTLRGA---RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAI 318 (490)
T ss_dssp HHHHTTSSCCGGGT-CSEEEEESSSTTCSC---SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHH
T ss_pred hhhcccccCCcccc-ceEEeccccccccCC---CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHH
Confidence 45677899987 999999999999999 489999765 45667765433 2333322 22
Q ss_pred HHHHH--HH-hhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012321 395 AAYLI--IR-GMKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 395 ~A~l~--lr-gL~tl~~R~e~~~~na~~La~~L~~~p 428 (466)
++..+ .. ....+....++..+|++.|++.|.+..
T Consensus 319 AAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G 355 (490)
T 3ou5_A 319 AAVAVALKQACTPMFREYSLQVLKNARAMADALLERG 355 (490)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 22211 12 233567788899999999999999875
No 229
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.50 E-value=3.1e-13 Score=139.01 Aligned_cols=209 Identities=12% Similarity=0.041 Sum_probs=142.0
Q ss_pred hhHHHHHHHHHhhhCCC--c-EEEe-CCHHHHHHHHHHHhccC--CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC-
Q 012321 210 PTTVVVEEKMSALEGAE--S-TVIM-ASGMSASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e--~-~v~~-~SG~aAi~~al~all~p--GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~- 282 (466)
...++.++.+++++|.+ . .+++ ++|++++++++..++.+ ||+|++....+.+.. +. ..+++.|+.+.+++.
T Consensus 58 ~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~-~~-~~a~~~G~~~~~~~~~ 135 (377)
T 3e77_A 58 KIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAK-AA-EEAKKFGTINIVHPKL 135 (377)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHHH-HH-HHHTTTSEEEECSCCC
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHHH-HH-HHHHHhCCceEEeccC
Confidence 45677789999999974 3 4553 46779999999999876 999988777666542 33 456778887776543
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEecccc
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S~sK 357 (466)
.++++++.+++++ |++|.+.+-.|.+|.+.|+ +|+++|+++++|.+++.+.. .+..+++ +++.|.+|
T Consensus 136 ~~~~~~~~~~~~~i~~~-t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~K 207 (377)
T 3e77_A 136 GSYTKIPDPSTWNLNPD-ASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQK 207 (377)
T ss_dssp SSSCSCCCGGGCCCCTT-CSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEEEGGG
T ss_pred CCcCCCCChHHhccCCC-ccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchhhcC--EEEEeccc
Confidence 2456667677764 9999998888889999998 47789999999999876533 3333444 78899999
Q ss_pred ccccccCceEEEEEeChHHHHHHH----------HHHH--HhCCCchHHHHHHHHHhhHH------HHHHHHHHHHHHHH
Q 012321 358 FIGGHNDVLAGSISGSGKLVTQIR----------NLHH--VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALR 419 (466)
Q Consensus 358 ~lgG~gdv~gG~vvg~~eli~~l~----------~~~~--~~G~~ls~~~A~l~lrgL~t------l~~R~e~~~~na~~ 419 (466)
++|++| .|+++.++++++++. .... ....+.+....+.+...++. ++.+.++..+.+++
T Consensus 208 ~~gp~G---~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~ 284 (377)
T 3e77_A 208 NVGSAG---VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQT 284 (377)
T ss_dssp TTSCTT---CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred ccCCCc---cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 997655 466666655432211 1110 11123333333333333332 45556677788899
Q ss_pred HHHHHHcCCCcE
Q 012321 420 MAKILEAHPKVK 431 (466)
Q Consensus 420 La~~L~~~p~V~ 431 (466)
+.+.|++.|++.
T Consensus 285 l~~~L~~~~g~~ 296 (377)
T 3e77_A 285 IYEIIDNSQGFY 296 (377)
T ss_dssp HHHHHHTSTTSE
T ss_pred HHHHHHhcCCce
Confidence 999999988764
No 230
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.41 E-value=2.2e-12 Score=135.88 Aligned_cols=206 Identities=13% Similarity=0.134 Sum_probs=126.7
Q ss_pred hhHHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHHHHhc-------c------------------CC---CEEEEcCCCc
Q 012321 210 PTTVVVEEKMSALE--GAESTVIMASGMSASTVMLLALV-------P------------------AG---GHIVTTTDCY 259 (466)
Q Consensus 210 p~~~~Lee~lA~l~--g~e~~v~~~SG~aAi~~al~all-------~------------------pG---D~VLv~~~~y 259 (466)
+..+.|+++|+++. +.+.+++++||++|+..++..+. + +| ++||+.++.|
T Consensus 110 ~l~~~la~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~y 189 (472)
T 1ohv_A 110 NFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAF 189 (472)
T ss_dssp THHHHHHHTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCC
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCc
Confidence 44555566566665 45788999999999999997663 1 46 8999999999
Q ss_pred cchHHHHHhhcc-----cCCcE-----EEEeC----C-------------CCHHHHHHhccCC-----CceEEEEeCCCC
Q 012321 260 RKTRIFIETVLP-----KMGIT-----ATVID----P-------------ADMEGLEAALNNN-----NVSLFFTESPTN 307 (466)
Q Consensus 260 ~~t~~~~~~~l~-----~~gi~-----v~~vd----~-------------~D~e~Le~ai~~~-----~tklV~lesPsN 307 (466)
++.......... ..+.. ...++ . .|+++|+++|++. ++++|++|..+|
T Consensus 190 Hg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~ 269 (472)
T 1ohv_A 190 HGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQS 269 (472)
T ss_dssp CCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBC
T ss_pred ccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcC
Confidence 874322211110 11111 11111 0 1578888888751 489999998888
Q ss_pred CCccccc----HHHHHHHHHhcCCEEEEeCCCCC-CCc---cchhccC----CcEEEeccccc-cccccCceEEEEEeCh
Q 012321 308 PFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT-PLN---QKALSLG----ADLVLHSATKF-IGGHNDVLAGSISGSG 374 (466)
Q Consensus 308 PtG~v~d----l~~I~ela~~~gillIvD~t~a~-~~~---~~pl~~g----aDivv~S~sK~-lgG~gdv~gG~vvg~~ 374 (466)
++|.+.+ +++|.++|+++|++||+||+|.. +.. .....+| .|++ +++|. ++ ||+++ ++
T Consensus 270 ~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~--t~sK~~l~------GG~~~-~~ 340 (472)
T 1ohv_A 270 EGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKMMT------GGFFH-KE 340 (472)
T ss_dssp TTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEE--EECGGGSS------EEEEE-CG
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEE--EEcccccc------CCccC-ch
Confidence 9998877 99999999999999999999863 111 1111234 5765 67798 44 36666 65
Q ss_pred HHHHHHHHHHHHhCC-CchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHc
Q 012321 375 KLVTQIRNLHHVLGG-ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 375 eli~~l~~~~~~~G~-~ls~~~A~l~lrgL~tl~--~R~e~~~~na~~La~~L~~ 426 (466)
++. .+.... ..+. ..++..+..++..++.+. ...++..++.++|.+.|++
T Consensus 341 ~~~-~~~~~~-~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 393 (472)
T 1ohv_A 341 EFR-PNAPYR-IFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLD 393 (472)
T ss_dssp GGS-CSSSSS-SCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred hhc-cccccc-ccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 542 111111 1121 235555554444444332 2345566666667666654
No 231
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.39 E-value=2.9e-12 Score=131.01 Aligned_cols=204 Identities=10% Similarity=0.033 Sum_probs=132.5
Q ss_pred hhHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC---
Q 012321 210 PTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~lA~l~g~e---~~v~-~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~--- 282 (466)
...++.++.+++++|.+ +.++ +++|++++++++..++ +||++++....+.+. .+. ..+++.|+++++++.
T Consensus 50 ~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~-~~~-~~a~~~G~~v~~~~~~~~ 126 (361)
T 3m5u_A 50 EVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTK-KAI-KEAQILGVNVKTVASSEE 126 (361)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHH-HHH-HHHHHTTCCEEEEEECTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHH-HHH-HHHHHcCCceEEEecccC
Confidence 45677789999999973 3444 3556699999999998 888653222223332 222 334566777776632
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEeccccc
Q 012321 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKF 358 (466)
Q Consensus 283 ----~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~S~sK~ 358 (466)
.+++. + |+++ |++|.+.+..|.+|.+.|. +++ +|+++++|.+++.+...-... ..|+++.|.+|+
T Consensus 127 g~~~~~~~~--~-l~~~-t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~-~~d~~~~s~~K~ 195 (361)
T 3m5u_A 127 SNFDHIPRV--E-FSDN-ADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFS-NIALFYGGVQKN 195 (361)
T ss_dssp TTSCSCCCC--C-CCTT-SSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCT-TEEEEEEETTTT
T ss_pred cCCCcCChh--h-cCCC-CCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCcc-cCCEEEEechhc
Confidence 24454 3 7764 9999998888888998762 333 499999999987654321222 368999999999
Q ss_pred cccccCceEEEEEeChHHHHHHHH--------HHH--HhC---CCchHHHHHHHHHhhHH------HHHHHHHHHHHHHH
Q 012321 359 IGGHNDVLAGSISGSGKLVTQIRN--------LHH--VLG---GALNPNAAYLIIRGMKT------LHLRVQQQNSTALR 419 (466)
Q Consensus 359 lgG~gdv~gG~vvg~~eli~~l~~--------~~~--~~G---~~ls~~~A~l~lrgL~t------l~~R~e~~~~na~~ 419 (466)
+|++| .|+++.++++.+++.. +.. ..+ .+.+....+.+..+++. ++.+.+++.+.+++
T Consensus 196 ~gp~G---~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~ 272 (361)
T 3m5u_A 196 AGISG---LSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATM 272 (361)
T ss_dssp SSCTT---CEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCc---cEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 97555 5888888888776643 110 011 23333333333333332 44455667778888
Q ss_pred HHHHHHcCCCc
Q 012321 420 MAKILEAHPKV 430 (466)
Q Consensus 420 La~~L~~~p~V 430 (466)
+.+.|++.+++
T Consensus 273 l~~~L~~~~g~ 283 (361)
T 3m5u_A 273 LYECIDLSNGF 283 (361)
T ss_dssp HHHHHHTSTTS
T ss_pred HHHHHHHCCCe
Confidence 99999988865
No 232
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.38 E-value=9e-13 Score=135.90 Aligned_cols=205 Identities=13% Similarity=0.021 Sum_probs=133.6
Q ss_pred chhHHHHHHHHHhhhCCC--c-EEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC--
Q 012321 209 NPTTVVVEEKMSALEGAE--S-TVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e--~-~v~~-~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-- 282 (466)
....++.++.+++++|++ . .+++ ++|++++++++..++++||+|++....+.+.. +. ..+++.| ++++++.
T Consensus 71 ~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~-~~-~~a~~~G-~v~~v~~~~ 147 (386)
T 3qm2_A 71 IQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAAS-AI-KEAKKYC-APQIIDAKI 147 (386)
T ss_dssp --CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHH-HH-HHHTTTS-EEEEEECEE
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHH-HH-HHHHHhC-CeEEEecCc
Confidence 456788899999999974 2 4553 58889999999999999999876555555433 22 3456677 7766543
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCccc-ccHHHHHHHHHhcCCEEEEeCCCCCCCc-cchhccCCcEEEec
Q 012321 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (466)
Q Consensus 283 ------~D~e~Le~ai~~~~tklV~lesPsNPtG~v-~dl~~I~ela~~~gillIvD~t~a~~~~-~~pl~~gaDivv~S 354 (466)
.++++++.+++++ |++|++.+-.|.+|.+ .|+++|. +|+++++|.+++.+.. .+..++ |+++.|
T Consensus 148 ~~~G~~~~~~~~~~~l~~~-t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~--~~~~~s 219 (386)
T 3qm2_A 148 TVDGKRAVKPMREWQLSDN-AAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRY--GVIYAG 219 (386)
T ss_dssp EETTEEEECCGGGCCCCTT-CSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGC--SEEEEE
T ss_pred ccCCCCCCchHHHhhcCCC-CcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcccc--CEEEEe
Confidence 2457777788774 9999998878888996 8888885 7999999999876533 333344 478899
Q ss_pred cccccccccCceEEEEEeChHHHHHHH----------HHH---HHhCCCchHHHHHHHHHhhHH------HHHHHHHHHH
Q 012321 355 ATKFIGGHNDVLAGSISGSGKLVTQIR----------NLH---HVLGGALNPNAAYLIIRGMKT------LHLRVQQQNS 415 (466)
Q Consensus 355 ~sK~lgG~gdv~gG~vvg~~eli~~l~----------~~~---~~~G~~ls~~~A~l~lrgL~t------l~~R~e~~~~ 415 (466)
.+|++|++| .|+++.++++++++. ... ...| +.+....+.+..+++. ++.+.++..+
T Consensus 220 ~hK~lGP~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~g-Tp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~ 295 (386)
T 3qm2_A 220 AQKNIGPAG---LTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFN-TPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQ 295 (386)
T ss_dssp TTTTTCCTT---EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC--------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred cccccCCCc---cEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCC-CCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 999997555 577777666532211 000 0111 1111111211222222 4445566677
Q ss_pred HHHHHHHHHHcCC
Q 012321 416 TALRMAKILEAHP 428 (466)
Q Consensus 416 na~~La~~L~~~p 428 (466)
.++++.+.|++.+
T Consensus 296 l~~~l~~~l~~~~ 308 (386)
T 3qm2_A 296 KAELLYGVIDNSD 308 (386)
T ss_dssp HHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHCC
Confidence 8888888888763
No 233
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.36 E-value=1.4e-11 Score=129.57 Aligned_cols=215 Identities=15% Similarity=0.132 Sum_probs=142.9
Q ss_pred CchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCccchHHHHHhh--cccCCcEEEEeCC
Q 012321 208 GNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV--LPKMGITATVIDP 282 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~-e~~v~~~SG~aAi~~al~all--~pGD~VLv~~~~y~~t~~~~~~~--l~~~gi~v~~vd~ 282 (466)
.++...+|+++|+++... +.+.+++||++|+..++.... ...++||....+|.+........ -......+..++.
T Consensus 125 ~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~ 204 (454)
T 4ao9_A 125 HNLLEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY 204 (454)
T ss_dssp EESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT
T ss_pred CcHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC
Confidence 356677899999998754 777888999999999887553 34578999888888732110000 0112234555677
Q ss_pred CCHHHHHHhccCC--CceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCC----CCccchhccCCcEEE
Q 012321 283 ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PLNQKALSLGADLVL 352 (466)
Q Consensus 283 ~D~e~Le~ai~~~--~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillIvD~t~a~----~~~~~pl~~gaDivv 352 (466)
.|++.+++.++++ ++.+|++|......|.+.+ +++|.++|++||++||+||++.. ...+.....-.|+++
T Consensus 205 nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PDi~t 284 (454)
T 4ao9_A 205 NDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRSDLTT 284 (454)
T ss_dssp TCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCSEEE
T ss_pred chHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCCcEEE
Confidence 8999999888642 4889999988877888876 89999999999999999999752 111222233458875
Q ss_pred eccccccccccCceEEEEEeChHHHHHHHHHH--HHhCCC--chHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHc
Q 012321 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA--LNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 353 ~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~--~~~G~~--ls~~~A~l~lrgL~tl--~~R~e~~~~na~~La~~L~~ 426 (466)
+.|.++|.- ..|++++++++++.+.... ...+++ .+|..+..++..|+.+ +..+++..++.++|.+.|++
T Consensus 285 --~gK~lggG~--Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 285 --LGKYIGGGM--SFGAFGGRADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNA 360 (454)
T ss_dssp --EEGGGGTTS--SCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred --eccccCCCC--cceeeeeHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHH
Confidence 789998753 4688889999887664211 012222 3466555555555443 23345555666666665544
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.19 E-value=2.2e-09 Score=112.99 Aligned_cols=214 Identities=15% Similarity=0.101 Sum_probs=130.0
Q ss_pred CchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCccchH-HHHHhhcc---------c
Q 012321 208 GNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTR-IFIETVLP---------K 272 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~al--l~pGD~VLv~~~~y~~t~-~~~~~~l~---------~ 272 (466)
.++...+|.++|.++... +.+++++||++|+..++... .....+|+.....|++.. ..+...-. .
T Consensus 105 ~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p 184 (456)
T 4atq_A 105 PYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGP 184 (456)
T ss_dssp CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCS
T ss_pred CcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCC
Confidence 355667888999998753 45778899999999988643 234578998888887743 22211110 0
Q ss_pred CCcEEEEeCC-----------CCHH-------HHHHhccCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEE
Q 012321 273 MGITATVIDP-----------ADME-------GLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVC 330 (466)
Q Consensus 273 ~gi~v~~vd~-----------~D~e-------~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~ela~~~gillI 330 (466)
....+..++. .+.+ .+++.+..+++.+|++|....-.|.+.+ +++|.++|++||++||
T Consensus 185 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI 264 (456)
T 4atq_A 185 FAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFI 264 (456)
T ss_dssp CCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEE
T ss_pred ccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceE
Confidence 1112333321 1222 2333333445899999988776777654 8999999999999999
Q ss_pred EeCCCCC----CCc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHHhCCCchHHHHHHHHHhhH
Q 012321 331 IDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (466)
Q Consensus 331 vD~t~a~----~~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~~G~~ls~~~A~l~lrgL~ 404 (466)
+||++.. +.+ +.....-.||++ +.|.++|.. ..|.+++++++++.+..........-+|..+..++..|+
T Consensus 265 ~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lggg~--P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~ 340 (456)
T 4atq_A 265 ADEVQSGFCRTGEWFAVDHEGVVPDIIT--MAKGIAGGL--PLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAID 340 (456)
T ss_dssp EECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGTTS--SCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred ecccccccCCccccccccccCCCCchhh--hhhcccCcC--CceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHH
Confidence 9999643 222 233333468887 469887653 567888888887765432211112235666666666665
Q ss_pred HHHH--HHHHHHHHHHHHHHHHH
Q 012321 405 TLHL--RVQQQNSTALRMAKILE 425 (466)
Q Consensus 405 tl~~--R~e~~~~na~~La~~L~ 425 (466)
.+.. .+++..+..+++.+.|+
T Consensus 341 ~i~~~~l~~~~~~~g~~l~~~L~ 363 (456)
T 4atq_A 341 TMEQHDLNGRARHIEELALGKLR 363 (456)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHHHHHHH
Confidence 5532 23333333444444433
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.15 E-value=9.3e-09 Score=108.63 Aligned_cols=226 Identities=14% Similarity=0.124 Sum_probs=139.8
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCccch-HHHHHhhc----cc
Q 012321 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKT-RIFIETVL----PK 272 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~--e~~v~~~SG~aAi~~al~all-------~pG-D~VLv~~~~y~~t-~~~~~~~l----~~ 272 (466)
.++...+|.++|.++.+. +.+.+.+||++|+..++.... +++ .+||.....|++. ...+...- ..
T Consensus 109 ~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~ 188 (473)
T 4e3q_A 109 MSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSV 188 (473)
T ss_dssp EEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGG
T ss_pred cCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccc
Confidence 356677889999998753 678888999999999887532 122 5788888888773 22221110 01
Q ss_pred CC---cEEEEeCCC----------C--------HHHHHHhcc---CCCceEEEEeCCCCCCccccc----HHHHHHHHHh
Q 012321 273 MG---ITATVIDPA----------D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (466)
Q Consensus 273 ~g---i~v~~vd~~----------D--------~e~Le~ai~---~~~tklV~lesPsNPtG~v~d----l~~I~ela~~ 324 (466)
++ .....++.. . .+++++.+. .+++.+|++|....-.|.+.+ +++|.++|++
T Consensus 189 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~ 268 (473)
T 4e3q_A 189 FGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRK 268 (473)
T ss_dssp GTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred cCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcc
Confidence 11 112222211 1 234444443 224789999988876777653 8999999999
Q ss_pred cCCEEEEeCCCCCC----Cc--cchhccCCcEEEeccccccccccCceEEEEEeChHHHHHHHHHHHH-----hCC--Cc
Q 012321 325 KGAIVCIDGTFATP----LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-----LGG--AL 391 (466)
Q Consensus 325 ~gillIvD~t~a~~----~~--~~pl~~gaDivv~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~~-----~G~--~l 391 (466)
+|++||.||++... .+ +.....-.||++ +.|.+++.. ...|.+++++++.+.+...... .|. .-
T Consensus 269 ~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t--~~K~l~gG~-~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~G 345 (473)
T 4e3q_A 269 YDIPVISDEVICGFGRTGNTWGCVTYDFTPDAII--SSKNLTAGF-FPMGAVILGPELSKRLETAIEAIEEFPHGFTASG 345 (473)
T ss_dssp TTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEE--ECGGGGTTS-SCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTT
T ss_pred cceEEeccCccccCCcccchhHHHhcCCCCChHH--hcccccCCC-CCcccccccHHHHHHhccccccccccccCCCCCC
Confidence 99999999996532 11 222333468886 679998753 3468888999998887653321 122 23
Q ss_pred hHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH---cCCCcEEEeCC
Q 012321 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE---AHPKVKRVHYP 436 (466)
Q Consensus 392 s~~~A~l~lrgL~tl~~--R~e~~~~na~~La~~L~---~~p~V~~V~~P 436 (466)
+|..+..++..|+.+.. .+++..+...+|.+.|+ ++|.|..|+--
T Consensus 346 npla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG~ 395 (473)
T 4e3q_A 346 HPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGI 395 (473)
T ss_dssp CHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEE
T ss_pred CcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCCCeeEEeec
Confidence 57777666666665542 23444445555555444 46777666433
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.96 E-value=2.2e-09 Score=120.76 Aligned_cols=226 Identities=13% Similarity=0.116 Sum_probs=139.3
Q ss_pred CCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhc-----cCC------------CEEEEcCCCccc-hHHH
Q 012321 207 YGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV-----PAG------------GHIVTTTDCYRK-TRIF 265 (466)
Q Consensus 207 ~~~p~~~~Lee~lA~l~g---~e~~v~~~SG~aAi~~al~all-----~pG------------D~VLv~~~~y~~-t~~~ 265 (466)
+.++...+|.++|+++.+ .+.+++++||++|+..++...+ ..| .+||..+..|++ +...
T Consensus 421 ~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~ga 500 (831)
T 4a0g_A 421 NVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGA 500 (831)
T ss_dssp EECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHH
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceee
Confidence 346778899999999987 3678889999999998887542 122 368888888876 3333
Q ss_pred HHhhc----c---------cCCc-------------EEEEeC------------CCC------------------HHHHH
Q 012321 266 IETVL----P---------KMGI-------------TATVID------------PAD------------------MEGLE 289 (466)
Q Consensus 266 ~~~~l----~---------~~gi-------------~v~~vd------------~~D------------------~e~Le 289 (466)
+...- + ..+. .....+ ..+ .+.|+
T Consensus 501 ls~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 580 (831)
T 4a0g_A 501 MEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLS 580 (831)
T ss_dssp HHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHH
T ss_pred eeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHH
Confidence 32110 0 0010 000011 011 25677
Q ss_pred Hhcc-------CCCceEEEEeCC-CCCCccccc----HHHHHHHHHhcCCEEEEeCCCCC----CCcc--chhccCCcEE
Q 012321 290 AALN-------NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PLNQ--KALSLGADLV 351 (466)
Q Consensus 290 ~ai~-------~~~tklV~lesP-sNPtG~v~d----l~~I~ela~~~gillIvD~t~a~----~~~~--~pl~~gaDiv 351 (466)
+.|+ ..++.+|++|.. .+..|.+.. +++|.++|++||++||+||++.. +... .......|++
T Consensus 581 ~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDii 660 (831)
T 4a0g_A 581 KHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIA 660 (831)
T ss_dssp HHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEE
T ss_pred HHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEE
Confidence 7775 234889999986 777787764 89999999999999999998652 2111 1222235777
Q ss_pred EeccccccccccCceEEEEEeChHHHHHHHHHHH----HhC--CCchHHHHHHHHHhhHHHHH--HHHHHHHH-------
Q 012321 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH----VLG--GALNPNAAYLIIRGMKTLHL--RVQQQNST------- 416 (466)
Q Consensus 352 v~S~sK~lgG~gdv~gG~vvg~~eli~~l~~~~~----~~G--~~ls~~~A~l~lrgL~tl~~--R~e~~~~n------- 416 (466)
+++|.++|. -+..|++++++++++.+..... ..| ...+|..+..++..|+.+.. ..++..++
T Consensus 661 --tlsK~L~gG-~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~ 737 (831)
T 4a0g_A 661 --CFAKLLTGG-MVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLREL 737 (831)
T ss_dssp --EECGGGGTT-SSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCC
T ss_pred --EEecccccC-ccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 588999873 2356889999999887653211 122 23467777766666665431 11111111
Q ss_pred -HHHHHHHHHcCCCcEEEeC
Q 012321 417 -ALRMAKILEAHPKVKRVHY 435 (466)
Q Consensus 417 -a~~La~~L~~~p~V~~V~~ 435 (466)
.+.+.+.|+++|.|..|.-
T Consensus 738 l~~~l~~~l~~~~~v~~vrg 757 (831)
T 4a0g_A 738 WDEELVQQISSHSAVQRVVV 757 (831)
T ss_dssp SCHHHHHHHHHSTTEEEEEE
T ss_pred HHHHHHHHHhhCCCceeEee
Confidence 1235566778888877753
No 237
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=63.20 E-value=51 Score=25.69 Aligned_cols=90 Identities=16% Similarity=0.258 Sum_probs=55.5
Q ss_pred cEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCC
Q 012321 227 STVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 227 ~~v~~~SG~aAi~~al~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesP 305 (466)
..++++.|..+.. ++..+...| .+|++.+..-. -... +...++.....|..+.+.+++.+.. ..+|+.+.|
T Consensus 7 ~v~I~G~G~iG~~-~~~~l~~~g~~~v~~~~r~~~----~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~~~ 78 (118)
T 3ic5_A 7 NICVVGAGKIGQM-IAALLKTSSNYSVTVADHDLA----ALAV-LNRMGVATKQVDAKDEAGLAKALGG--FDAVISAAP 78 (118)
T ss_dssp EEEEECCSHHHHH-HHHHHHHCSSEEEEEEESCHH----HHHH-HHTTTCEEEECCTTCHHHHHHHTTT--CSEEEECSC
T ss_pred eEEEECCCHHHHH-HHHHHHhCCCceEEEEeCCHH----HHHH-HHhCCCcEEEecCCCHHHHHHHHcC--CCEEEECCC
Confidence 4556666664433 334455667 56665443211 1212 2245777777888888999988864 678887665
Q ss_pred CCCCcccccHHHHHHHHHhcCCEEE
Q 012321 306 TNPFLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 306 sNPtG~v~dl~~I~ela~~~gillI 330 (466)
.. ....+.+.|.+.|+..+
T Consensus 79 ~~------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 79 FF------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp GG------GHHHHHHHHHHTTCEEE
T ss_pred ch------hhHHHHHHHHHhCCCEE
Confidence 32 24678888888887654
No 238
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=59.00 E-value=98 Score=27.96 Aligned_cols=120 Identities=10% Similarity=0.169 Sum_probs=68.6
Q ss_pred CchhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE---EEEeC
Q 012321 208 GNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT---ATVID 281 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e---~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~---v~~vd 281 (466)
..|....+-..+....+.. .++=+++|+......+...+.++.+|+..+..-. ........++..|+. +.++.
T Consensus 37 i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 37 PDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESE-HQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHH-HHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCcCcEEEEE
Confidence 3577777878888877765 6777888886555555445666778877665432 233333334444443 55443
Q ss_pred CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh---cCCEEEEeCCC
Q 012321 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTF 335 (466)
Q Consensus 282 ~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~---~gillIvD~t~ 335 (466)
. |..++...+.+....+|++..+. .+..++.+.+.+ .|.++++|++.
T Consensus 116 g-da~~~l~~~~~~~fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 116 S-RPLDVMSRLANDSYQLVFGQVSP------MDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp S-CHHHHGGGSCTTCEEEEEECCCT------TTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred c-CHHHHHHHhcCCCcCeEEEcCcH------HHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3 44444333422247899885432 233333333332 46778888874
No 239
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=55.09 E-value=21 Score=31.25 Aligned_cols=75 Identities=11% Similarity=0.025 Sum_probs=50.1
Q ss_pred CEEEEcC---CCccchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc
Q 012321 250 GHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (466)
Q Consensus 250 D~VLv~~---~~y~~t~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~ 325 (466)
.+|++.. ..|.--..++...++..|.++.+... ..++++.+++.+.++.+|.++.-. +.....+.++.+.+++.
T Consensus 19 ~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~--~~~~~~~~~~i~~L~~~ 96 (161)
T 2yxb_A 19 YKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILN--GAHLHLMKRLMAKLREL 96 (161)
T ss_dssp CEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESS--SCHHHHHHHHHHHHHHT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeec--hhhHHHHHHHHHHHHhc
Confidence 4555543 34444445566678888999987764 467888877766568888886554 34455678888888875
Q ss_pred C
Q 012321 326 G 326 (466)
Q Consensus 326 g 326 (466)
|
T Consensus 97 g 97 (161)
T 2yxb_A 97 G 97 (161)
T ss_dssp T
T ss_pred C
Confidence 4
No 240
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=51.29 E-value=38 Score=29.39 Aligned_cols=88 Identities=13% Similarity=0.063 Sum_probs=51.2
Q ss_pred CcEEEeCCHHHHHHHHHHHhccC-CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHh--ccCCCceEEEE
Q 012321 226 ESTVIMASGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAA--LNNNNVSLFFT 302 (466)
Q Consensus 226 e~~v~~~SG~aAi~~al~all~p-GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~a--i~~~~tklV~l 302 (466)
...++++.|..+...+ ..+... |-+|++.+..- ..... +...|+.+...|..+.+.++++ +.+ .++|++
T Consensus 40 ~~v~IiG~G~~G~~~a-~~L~~~~g~~V~vid~~~----~~~~~-~~~~g~~~~~gd~~~~~~l~~~~~~~~--ad~vi~ 111 (183)
T 3c85_A 40 AQVLILGMGRIGTGAY-DELRARYGKISLGIEIRE----EAAQQ-HRSEGRNVISGDATDPDFWERILDTGH--VKLVLL 111 (183)
T ss_dssp CSEEEECCSHHHHHHH-HHHHHHHCSCEEEEESCH----HHHHH-HHHTTCCEEECCTTCHHHHHTBCSCCC--CCEEEE
T ss_pred CcEEEECCCHHHHHHH-HHHHhccCCeEEEEECCH----HHHHH-HHHCCCCEEEcCCCCHHHHHhccCCCC--CCEEEE
Confidence 4688888887655443 344455 65565544322 11222 3345777766677788878776 543 678888
Q ss_pred eCCCCCCcccccHHHHHHHHHhcC
Q 012321 303 ESPTNPFLRCVDVKLVSDLCHKKG 326 (466)
Q Consensus 303 esPsNPtG~v~dl~~I~ela~~~g 326 (466)
.+|+. .....+...+++.+
T Consensus 112 ~~~~~-----~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 112 AMPHH-----QGNQTALEQLQRRN 130 (183)
T ss_dssp CCSSH-----HHHHHHHHHHHHTT
T ss_pred eCCCh-----HHHHHHHHHHHHHC
Confidence 66651 12345566677654
No 241
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=51.12 E-value=98 Score=29.39 Aligned_cols=99 Identities=10% Similarity=0.039 Sum_probs=52.4
Q ss_pred cEEEeCCHHHHH-HHHHHHhccCCCEEEEcCCCccchHHHHHhhccc------CCcEEEEeCCCCHHHHHHhccCCCceE
Q 012321 227 STVIMASGMSAS-TVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK------MGITATVIDPADMEGLEAALNNNNVSL 299 (466)
Q Consensus 227 ~~v~~~SG~aAi-~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~------~gi~v~~vd~~D~e~Le~ai~~~~tkl 299 (466)
..+++++|+.-| ..++..|++.|.+|++..-.-......+...... .++++...|..|.+.++++++. +.+
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~ 103 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG--VDH 103 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT--CSE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC--CCE
Confidence 344444444222 2344556778888776543222222222221111 4677777888899999999874 566
Q ss_pred EEEeCCC-CCCccccc-----------HHHHHHHHHhcCC
Q 012321 300 FFTESPT-NPFLRCVD-----------VKLVSDLCHKKGA 327 (466)
Q Consensus 300 V~lesPs-NPtG~v~d-----------l~~I~ela~~~gi 327 (466)
|+-.... ++.....+ ...|.+.|++.++
T Consensus 104 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 104 VLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6643322 11111111 2357888888775
No 242
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=48.84 E-value=55 Score=31.34 Aligned_cols=92 Identities=11% Similarity=0.051 Sum_probs=53.1
Q ss_pred HHHHhccCCCEEEEc-CCC--ccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHH
Q 012321 241 MLLALVPAGGHIVTT-TDC--YRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKL 317 (466)
Q Consensus 241 al~all~pGD~VLv~-~~~--y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~ 317 (466)
++..|++.|.+|.+. ... .......+ ..+...++++...|..|.+.+.+++++.++..|+..... ..+.....
T Consensus 26 l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~---~n~~~~~~ 101 (346)
T 3i6i_A 26 VATASLDAHRPTYILARPGPRSPSKAKIF-KALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGG---ESILDQIA 101 (346)
T ss_dssp HHHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEECCCG---GGGGGHHH
T ss_pred HHHHHHHCCCCEEEEECCCCCChhHHHHH-HHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEECCch---hhHHHHHH
Confidence 344566667655543 322 11111112 123345888888899999999999973235666654433 12334578
Q ss_pred HHHHHHhcC-CEEEEeCCCC
Q 012321 318 VSDLCHKKG-AIVCIDGTFA 336 (466)
Q Consensus 318 I~ela~~~g-illIvD~t~a 336 (466)
|.+.|++.| +..++=..|+
T Consensus 102 l~~aa~~~g~v~~~v~S~~g 121 (346)
T 3i6i_A 102 LVKAMKAVGTIKRFLPSEFG 121 (346)
T ss_dssp HHHHHHHHCCCSEEECSCCS
T ss_pred HHHHHHHcCCceEEeecccC
Confidence 889999888 6544434443
No 243
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=48.07 E-value=1.2e+02 Score=28.80 Aligned_cols=122 Identities=12% Similarity=0.076 Sum_probs=70.3
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcC---CCccchHHHHHhh--------cccC-CcEEEEeCC-CCHHHHHHhccCCCce
Q 012321 232 ASGMSASTVMLLALVPAGGHIVTTT---DCYRKTRIFIETV--------LPKM-GITATVIDP-ADMEGLEAALNNNNVS 298 (466)
Q Consensus 232 ~SG~aAi~~al~all~pGD~VLv~~---~~y~~t~~~~~~~--------l~~~-gi~v~~vd~-~D~e~Le~ai~~~~tk 298 (466)
+.-+..+...+........+|++.. ..|.--..++... ++.. |.++.+.-. ..++++.+++.+.++.
T Consensus 103 ~~~~~~~~~~l~~~~~~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa~e~~~d 182 (262)
T 1xrs_B 103 ILSMEETDEYIKENIGRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVELEAD 182 (262)
T ss_dssp CCCHHHHHHHHHHHTCSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHHHHcCCC
Confidence 3334444444444443344565543 3444334445555 7888 999877653 3578877776655688
Q ss_pred EEEEeCCCCCCc--ccccHHHHHHHHHhcC----CEEEEeCCCCCCCccchhccCCcEEEeccc
Q 012321 299 LFFTESPTNPFL--RCVDVKLVSDLCHKKG----AIVCIDGTFATPLNQKALSLGADLVLHSAT 356 (466)
Q Consensus 299 lV~lesPsNPtG--~v~dl~~I~ela~~~g----illIvD~t~a~~~~~~pl~~gaDivv~S~s 356 (466)
+|.+..-.. ++ .+..+.++.+.+++.| +.+++=....+. ......|+|.+....+
T Consensus 183 ~VglS~l~t-~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~~~~~--~~a~~iGad~~~~da~ 243 (262)
T 1xrs_B 183 VLLVSQTVT-QKNVHIQNMTHLIELLEAEGLRDRFVLLCGGPRINN--EIAKELGYDAGFGPGR 243 (262)
T ss_dssp EEEEECCCC-TTSHHHHHHHHHHHHHHHTTCGGGSEEEEECTTCCH--HHHHTTTCSEEECTTC
T ss_pred EEEEEeecC-CccchHHHHHHHHHHHHhcCCCCCCEEEEECCcCCH--HHHHHcCCeEEECCch
Confidence 999855442 21 3456788888888866 777776653211 1122456776664433
No 244
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=46.60 E-value=1.5e+02 Score=26.14 Aligned_cols=122 Identities=11% Similarity=0.058 Sum_probs=58.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc--EEEEeCCCCHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi--~v~~vd~~D~e 286 (466)
++....+-..+..+.+...++=+++|+......+...+.++.+|+..+..-.. .......++..|+ .+.++.. |..
T Consensus 54 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-~~~a~~~~~~~g~~~~i~~~~~-d~~ 131 (229)
T 2avd_A 54 TCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQP-PELGRPLWRQAEAEHKIDLRLK-PAL 131 (229)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHH-HHHHHHHHHHTTCTTTEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHCCCCCeEEEEEc-CHH
Confidence 45555555666666666777777887744444443344446677766643322 2233333333332 2333322 333
Q ss_pred H-HHHhccC---CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 287 G-LEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 287 ~-Le~ai~~---~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
+ +.....+ ....+|++..+. .....-++.+.++.+ .|.++++|++.
T Consensus 132 ~~~~~~~~~~~~~~~D~v~~d~~~--~~~~~~l~~~~~~L~-pgG~lv~~~~~ 181 (229)
T 2avd_A 132 ETLDELLAAGEAGTFDVAVVDADK--ENCSAYYERCLQLLR-PGGILAVLRVL 181 (229)
T ss_dssp HHHHHHHHTTCTTCEEEEEECSCS--TTHHHHHHHHHHHEE-EEEEEEEECCS
T ss_pred HHHHHHHhcCCCCCccEEEECCCH--HHHHHHHHHHHHHcC-CCeEEEEECCC
Confidence 3 2322211 236888885431 000111333444333 35567777764
No 245
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=46.37 E-value=1e+02 Score=26.56 Aligned_cols=40 Identities=8% Similarity=0.045 Sum_probs=26.3
Q ss_pred CcccccHHHHHHHHHhcCCE--EEEeCCCCCCCccchhccCCcEEEec
Q 012321 309 FLRCVDVKLVSDLCHKKGAI--VCIDGTFATPLNQKALSLGADLVLHS 354 (466)
Q Consensus 309 tG~v~dl~~I~ela~~~gil--lIvD~t~a~~~~~~pl~~gaDivv~S 354 (466)
.|...++-++++.++++|+. .|.|+. ..++..-+|+++.-
T Consensus 106 sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s~la~~ad~~l~~ 147 (183)
T 2xhz_A 106 SGESSEITALIPVLKRLHVPLICITGRP------ESSMARAADVHLCV 147 (183)
T ss_dssp SSCCHHHHHHHHHHHTTTCCEEEEESCT------TSHHHHHSSEEEEC
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCC------CChhHHhCCEEEEe
Confidence 47778888999999998864 444432 23454447766653
No 246
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=43.38 E-value=99 Score=28.75 Aligned_cols=85 Identities=11% Similarity=0.058 Sum_probs=49.4
Q ss_pred HHHHhccCCCEEEEcC-CCc---cchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCC-CCcccccH
Q 012321 241 MLLALVPAGGHIVTTT-DCY---RKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN-PFLRCVDV 315 (466)
Q Consensus 241 al~all~pGD~VLv~~-~~y---~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsN-PtG~v~dl 315 (466)
++..|++.|.+|++.. ..- +.....+.. +...++++...|..|.+.+.++++. ...|+...... +...+.-.
T Consensus 20 l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~l~~~~~~--~d~vi~~a~~~~~~~~~~~~ 96 (313)
T 1qyd_A 20 IVNASISLGHPTYVLFRPEVVSNIDKVQMLLY-FKQLGAKLIEASLDDHQRLVDALKQ--VDVVISALAGGVLSHHILEQ 96 (313)
T ss_dssp HHHHHHHTTCCEEEECCSCCSSCHHHHHHHHH-HHTTTCEEECCCSSCHHHHHHHHTT--CSEEEECCCCSSSSTTTTTH
T ss_pred HHHHHHhCCCcEEEEECCCcccchhHHHHHHH-HHhCCeEEEeCCCCCHHHHHHHHhC--CCEEEECCccccchhhHHHH
Confidence 3445666776665543 221 111111111 2345788777788899999999975 56666544332 11134456
Q ss_pred HHHHHHHHhcC-CE
Q 012321 316 KLVSDLCHKKG-AI 328 (466)
Q Consensus 316 ~~I~ela~~~g-il 328 (466)
..+.+.|++.| +-
T Consensus 97 ~~l~~aa~~~g~v~ 110 (313)
T 1qyd_A 97 LKLVEAIKEAGNIK 110 (313)
T ss_dssp HHHHHHHHHSCCCS
T ss_pred HHHHHHHHhcCCCc
Confidence 78899999988 53
No 247
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=42.93 E-value=1.7e+02 Score=25.69 Aligned_cols=120 Identities=13% Similarity=0.191 Sum_probs=60.9
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE--EEEeCCCCHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADME 286 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~--v~~vd~~D~e 286 (466)
.+....+-..+........++=+++|+......+...+.++.+|+..+..-. ........++..|+. +.++. .|..
T Consensus 49 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~-~d~~ 126 (225)
T 3tr6_A 49 APEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEK-STALAKEYWEKAGLSDKIGLRL-SPAK 126 (225)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHH-HHHHHHHHHHHTTCTTTEEEEE-SCHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHH-HHHHHHHHHHHCCCCCceEEEe-CCHH
Confidence 4556666666666666677777788775444444444444667776655332 222333333333432 33332 2343
Q ss_pred HHHHhccC----CCceEEEEeCCCCCCcccccHHHHHHHHHh---cCCEEEEeCCCC
Q 012321 287 GLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTFA 336 (466)
Q Consensus 287 ~Le~ai~~----~~tklV~lesPsNPtG~v~dl~~I~ela~~---~gillIvD~t~a 336 (466)
+....+.. ....+|++..+ ..+...+.+.+.+ .|.++++|+++.
T Consensus 127 ~~~~~~~~~~~~~~fD~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 127 DTLAELIHAGQAWQYDLIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp HHHHHHHTTTCTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHHHhhhccCCCCccEEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 33222221 24788887443 2233333333332 366777787753
No 248
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=42.55 E-value=1.4e+02 Score=25.70 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=28.5
Q ss_pred CcccccHHHHHHHHHhcCCEE--EEeCCCCCCCccchhccCCcEEEecccc
Q 012321 309 FLRCVDVKLVSDLCHKKGAIV--CIDGTFATPLNQKALSLGADLVLHSATK 357 (466)
Q Consensus 309 tG~v~dl~~I~ela~~~gill--IvD~t~a~~~~~~pl~~gaDivv~S~sK 357 (466)
.|...++-++++.++++|+.+ |.|+. ..++...+|+++...++
T Consensus 97 sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s~l~~~ad~~l~~~~~ 141 (187)
T 3sho_A 97 WRYLRDTVAALAGAAERGVPTMALTDSS------VSPPARIADHVLVAATR 141 (187)
T ss_dssp SSCCHHHHHHHHHHHHTTCCEEEEESCT------TSHHHHHCSEEEECCCC
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEeCCC------CCcchhhCcEEEEecCC
Confidence 477788889999999988654 44432 34554457877765443
No 249
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=41.31 E-value=1.3e+02 Score=23.90 Aligned_cols=89 Identities=16% Similarity=0.085 Sum_probs=48.8
Q ss_pred cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCC
Q 012321 227 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 227 ~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPs 306 (466)
..++++.|.-+... ...+.+.|.+|++.+..- ...+......++.+...+..+.+.+.+..-+ +.++|+++.|.
T Consensus 6 ~i~IiG~G~iG~~~-a~~L~~~g~~v~~~d~~~----~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-~~d~vi~~~~~ 79 (140)
T 1lss_A 6 YIIIAGIGRVGYTL-AKSLSEKGHDIVLIDIDK----DICKKASAEIDALVINGDCTKIKTLEDAGIE-DADMYIAVTGK 79 (140)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCEEEEEESCH----HHHHHHHHHCSSEEEESCTTSHHHHHHTTTT-TCSEEEECCSC
T ss_pred EEEEECCCHHHHHH-HHHHHhCCCeEEEEECCH----HHHHHHHHhcCcEEEEcCCCCHHHHHHcCcc-cCCEEEEeeCC
Confidence 46677777755443 334556677776654321 1222222334666655566677777655222 26888887765
Q ss_pred CCCcccccHHHHHHHHHhcC
Q 012321 307 NPFLRCVDVKLVSDLCHKKG 326 (466)
Q Consensus 307 NPtG~v~dl~~I~ela~~~g 326 (466)
. ..-..+.+++++.+
T Consensus 80 ~-----~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 80 E-----EVNLMSSLLAKSYG 94 (140)
T ss_dssp H-----HHHHHHHHHHHHTT
T ss_pred c-----hHHHHHHHHHHHcC
Confidence 2 11134556666655
No 250
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=40.27 E-value=16 Score=36.90 Aligned_cols=83 Identities=14% Similarity=0.189 Sum_probs=49.1
Q ss_pred cCCCEEEEcCCCccchHHH---HHhhcccCCcEEEEeCCCCHHHH------HHhccCCC-ceEEEEeCCCCCCcccccHH
Q 012321 247 PAGGHIVTTTDCYRKTRIF---IETVLPKMGITATVIDPADMEGL------EAALNNNN-VSLFFTESPTNPFLRCVDVK 316 (466)
Q Consensus 247 ~pGD~VLv~~~~y~~t~~~---~~~~l~~~gi~v~~vd~~D~e~L------e~ai~~~~-tklV~lesPsNPtG~v~dl~ 316 (466)
.+|..|++.--.+. ...+ +...++.+|++...+.+.. |.+ ........ +. | .+.+..|...|++
T Consensus 7 ~~g~~~i~~~f~W~-w~~ia~e~~~yl~~~G~~~v~~~P~~-e~~~~~~~~~~~~~~Y~~~d--y--~i~~~~Gt~~df~ 80 (496)
T 4gqr_A 7 QQGRTSIVHLFEWR-WVDIALECERYLAPKGFGGVQVSPPN-ENVAIYNPFRPWWERYQPVS--Y--KLCTRSGNEDEFR 80 (496)
T ss_dssp CTTCCEEEEETTCC-HHHHHHHHHHTTTTTTCCEEEECCCS-CBBCCTTTTSCGGGGGSBSC--S--CSCBTTBCHHHHH
T ss_pred CCCCcEEEEecCCC-HHHHHHHHHHHHHHhCCCEEEeCccc-cCccCCCCCCCcccccCccC--c--eeCCCCCCHHHHH
Confidence 35666776544442 1111 2234777888877775431 000 00000000 11 2 3455679999999
Q ss_pred HHHHHHHhcCCEEEEeCCC
Q 012321 317 LVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 317 ~I~ela~~~gillIvD~t~ 335 (466)
++++.||++|+.||+|-++
T Consensus 81 ~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 81 NMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp HHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEcc
Confidence 9999999999999999874
No 251
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=39.99 E-value=2.2e+02 Score=25.98 Aligned_cols=123 Identities=15% Similarity=0.117 Sum_probs=61.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc--EEEEeCCCCHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi--~v~~vd~~D~e 286 (466)
.|....+-..+.++.+....+=+++|+......+...+.++.+|+..+..-. ........++..|+ .+.++.. |..
T Consensus 64 ~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~-~~~~a~~~~~~~g~~~~i~~~~g-da~ 141 (247)
T 1sui_A 64 SADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKE-NYELGLPVIKKAGVDHKIDFREG-PAL 141 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCH-HHHHHHHHHHHTTCGGGEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCCeEEEEC-CHH
Confidence 4566666666666667777777888775444444444555667776654332 22333333333443 2433322 333
Q ss_pred H-HHHhcc----CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 287 G-LEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 287 ~-Le~ai~----~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
+ +..... .....+|++.... .....-++.+.++.+. |.++++|++..
T Consensus 142 ~~l~~l~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lkp-GG~lv~d~~~~ 193 (247)
T 1sui_A 142 PVLDEMIKDEKNHGSYDFIFVDADK--DNYLNYHKRLIDLVKV-GGVIGYDNTLW 193 (247)
T ss_dssp HHHHHHHHSGGGTTCBSEEEECSCS--TTHHHHHHHHHHHBCT-TCCEEEECTTG
T ss_pred HHHHHHHhccCCCCCEEEEEEcCch--HHHHHHHHHHHHhCCC-CeEEEEecCCc
Confidence 3 332210 1236789885431 0111123444444443 55667888743
No 252
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=39.83 E-value=76 Score=29.83 Aligned_cols=84 Identities=10% Similarity=0.097 Sum_probs=49.4
Q ss_pred HHHHhccCCCEEEEc-CCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHH
Q 012321 241 MLLALVPAGGHIVTT-TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (466)
Q Consensus 241 al~all~pGD~VLv~-~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ 319 (466)
++..|++.|.+|++. ...- .....+.. +...++++...|..|.+.+.++++. ...|+...... .+.-...+.
T Consensus 27 l~~~L~~~g~~V~~l~R~~~-~~~~~~~~-l~~~~v~~v~~Dl~d~~~l~~a~~~--~d~vi~~a~~~---~~~~~~~l~ 99 (318)
T 2r6j_A 27 MVKGSLKLGHPTYVFTRPNS-SKTTLLDE-FQSLGAIIVKGELDEHEKLVELMKK--VDVVISALAFP---QILDQFKIL 99 (318)
T ss_dssp HHHHHHHTTCCEEEEECTTC-SCHHHHHH-HHHTTCEEEECCTTCHHHHHHHHTT--CSEEEECCCGG---GSTTHHHHH
T ss_pred HHHHHHHCCCcEEEEECCCC-chhhHHHH-hhcCCCEEEEecCCCHHHHHHHHcC--CCEEEECCchh---hhHHHHHHH
Confidence 344566667665543 3221 11111211 2335788888899999999999975 56666543321 134467888
Q ss_pred HHHHhcC-CEEEE
Q 012321 320 DLCHKKG-AIVCI 331 (466)
Q Consensus 320 ela~~~g-illIv 331 (466)
+.|++.| +.-++
T Consensus 100 ~aa~~~g~v~~~v 112 (318)
T 2r6j_A 100 EAIKVAGNIKRFL 112 (318)
T ss_dssp HHHHHHCCCCEEE
T ss_pred HHHHhcCCCCEEE
Confidence 8898887 54333
No 253
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=39.24 E-value=1.4e+02 Score=24.35 Aligned_cols=89 Identities=16% Similarity=0.134 Sum_probs=51.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCC
Q 012321 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 226 e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesP 305 (466)
...++++.|.-+.. +...+...|-+|++.+..- ..++. +...++.+...|..|.+.++++--+ +.++|++..|
T Consensus 7 ~~v~I~G~G~iG~~-la~~L~~~g~~V~~id~~~----~~~~~-~~~~~~~~~~gd~~~~~~l~~~~~~-~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVG-LVRELTAAGKKVLAVDKSK----EKIEL-LEDEGFDAVIADPTDESFYRSLDLE-GVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHH-HHHHHHHTTCCEEEEESCH----HHHHH-HHHTTCEEEECCTTCHHHHHHSCCT-TCSEEEECCS
T ss_pred CEEEEECCCHHHHH-HHHHHHHCCCeEEEEECCH----HHHHH-HHHCCCcEEECCCCCHHHHHhCCcc-cCCEEEEecC
Confidence 46788888874443 3344556676666654422 11222 2334777777788888888876323 3678888666
Q ss_pred CCCCcccccHHHHHHHHHhcC
Q 012321 306 TNPFLRCVDVKLVSDLCHKKG 326 (466)
Q Consensus 306 sNPtG~v~dl~~I~ela~~~g 326 (466)
+ . ..-..++..+++.+
T Consensus 80 ~-~----~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 80 D-D----EFNLKILKALRSVS 95 (141)
T ss_dssp C-H----HHHHHHHHHHHHHC
T ss_pred C-H----HHHHHHHHHHHHhC
Confidence 3 1 11234556666654
No 254
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=39.04 E-value=1.2e+02 Score=28.78 Aligned_cols=67 Identities=9% Similarity=0.040 Sum_probs=43.6
Q ss_pred CCcEEEEeCCC--CHHHHHHhcc----CCCceEEEEe----CCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC
Q 012321 273 MGITATVIDPA--DMEGLEAALN----NNNVSLFFTE----SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 273 ~gi~v~~vd~~--D~e~Le~ai~----~~~tklV~le----sPsNPtG~v~dl~~I~ela~~~gillIvD~t~a~~~ 339 (466)
.|..+.+-... +++++..++. ..+..+++++ +-.|..-...|+..|..+.+..+.++|+|.+++.+.
T Consensus 129 ~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 129 VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 45555544332 5666666552 2224677777 333445556788888888777799999999998764
No 255
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=38.29 E-value=2.2e+02 Score=25.60 Aligned_cols=119 Identities=18% Similarity=0.184 Sum_probs=60.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc--EEEEeCCCCHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi--~v~~vd~~D~e 286 (466)
.+....+-..+....+...++=+++|+......+...+.++.+|+..+.. ..........++..|+ .+.++.. |..
T Consensus 55 ~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~-~~~~~~a~~~~~~~g~~~~i~~~~g-da~ 132 (237)
T 3c3y_A 55 SPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFD-REAYEIGLPFIRKAGVEHKINFIES-DAM 132 (237)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESC-HHHHHHHHHHHHHTTCGGGEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECC-HHHHHHHHHHHHHcCCCCcEEEEEc-CHH
Confidence 45556666666666666777777777744444444445556677766543 2223333333333443 2433322 333
Q ss_pred H-HHHhcc----CCCceEEEEeCCCCCCcccccHHHHHHHHHh---cCCEEEEeCCC
Q 012321 287 G-LEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTF 335 (466)
Q Consensus 287 ~-Le~ai~----~~~tklV~lesPsNPtG~v~dl~~I~ela~~---~gillIvD~t~ 335 (466)
+ +..... .....+|++..+. .+...+.+.+.+ .|.++++|++.
T Consensus 133 ~~l~~l~~~~~~~~~fD~I~~d~~~------~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 133 LALDNLLQGQESEGSYDFGFVDADK------PNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp HHHHHHHHSTTCTTCEEEEEECSCG------GGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred HHHHHHHhccCCCCCcCEEEECCch------HHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 3 332211 2237899885332 233333333333 46677888874
No 256
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=37.93 E-value=2.3e+02 Score=25.66 Aligned_cols=123 Identities=13% Similarity=0.103 Sum_probs=62.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE--EEEeCCCCHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADME 286 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~--v~~vd~~D~e 286 (466)
.+....+-..++.+.+...++=+++|+......+...+.++.+|+..+..- .........+...|+. +.++. .|..
T Consensus 48 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~-~~~~~a~~~~~~~g~~~~v~~~~-~d~~ 125 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADA-HHAQVARENLQLAGVDQRVTLRE-GPAL 125 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCH-HHHHHHHHHHHHTTCTTTEEEEE-SCHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEE-cCHH
Confidence 466666666676777777777788887554444444454466777665432 2223333333333432 33332 3444
Q ss_pred HHHHhccC-CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 287 GLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 287 ~Le~ai~~-~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
+....+.+ ....+|++..+. .....-++.+.++.+ .|.++++|++..
T Consensus 126 ~~l~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lk-pGG~lv~~~~~~ 173 (248)
T 3tfw_A 126 QSLESLGECPAFDLIFIDADK--PNNPHYLRWALRYSR-PGTLIIGDNVVR 173 (248)
T ss_dssp HHHHTCCSCCCCSEEEECSCG--GGHHHHHHHHHHTCC-TTCEEEEECCSG
T ss_pred HHHHhcCCCCCeEEEEECCch--HHHHHHHHHHHHhcC-CCeEEEEeCCCc
Confidence 43333332 136788884431 000111333333333 366788888753
No 257
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=37.63 E-value=72 Score=28.68 Aligned_cols=84 Identities=17% Similarity=0.141 Sum_probs=55.7
Q ss_pred CEEEEcC---CCccchHHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc
Q 012321 250 GHIVTTT---DCYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (466)
Q Consensus 250 D~VLv~~---~~y~~t~~~~~~~l~~~gi~v~~vd~~-D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~ 325 (466)
.+|++.. ..|.--..++...++..|.++.+.... .++++.+++.+.++.+|.+..-. +.....+.++.+.+++.
T Consensus 89 ~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~--~~~~~~~~~~i~~l~~~ 166 (210)
T 1y80_A 89 GKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALL--TTTMMNMKSTIDALIAA 166 (210)
T ss_dssp CEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCS--GGGTHHHHHHHHHHHHT
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHhc
Confidence 3565543 334434455666788889999887643 57888777765458888885543 33455688888888876
Q ss_pred C----CEEEEeCCC
Q 012321 326 G----AIVCIDGTF 335 (466)
Q Consensus 326 g----illIvD~t~ 335 (466)
+ +.+++=...
T Consensus 167 ~~~~~~~v~vGG~~ 180 (210)
T 1y80_A 167 GLRDRVKVIVGGAP 180 (210)
T ss_dssp TCGGGCEEEEESTT
T ss_pred CCCCCCeEEEECCC
Confidence 5 777775543
No 258
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=37.16 E-value=2.6e+02 Score=26.97 Aligned_cols=169 Identities=12% Similarity=0.057 Sum_probs=85.4
Q ss_pred ccCCccccCCCccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHhhhC---CCcE--EEe-CCHHHHHHHHHHHhc
Q 012321 173 ITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEG---AEST--VIM-ASGMSASTVMLLALV 246 (466)
Q Consensus 173 v~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Lee~lA~l~g---~e~~--v~~-~SG~aAi~~al~all 246 (466)
+..||.++.-....+.+..........-++...++.+ .+.+++.+.++-. ..-. +++ .... ...+..++
T Consensus 25 ~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~--~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~---~~~~~~~~ 99 (326)
T 3bo9_A 25 IEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMK--PDDLRKAISELRQKTDKPFGVNIILVSPWA---DDLVKVCI 99 (326)
T ss_dssp CSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCC--HHHHHHHHHHHHTTCSSCEEEEEETTSTTH---HHHHHHHH
T ss_pred CCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCC--HHHHHHHHHHHHHhcCCCEEEEEeccCCCH---HHHHHHHH
Confidence 5668887776655555544443332222333344333 3445555444432 2222 222 1122 11222223
Q ss_pred cCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCC--CCcccccHHHHHHHHH
Q 012321 247 PAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN--PFLRCVDVKLVSDLCH 323 (466)
Q Consensus 247 ~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsN--PtG~v~dl~~I~ela~ 323 (466)
..| |-|.+... .+ ..++ ..++..|+.+.. ...+.+..+.+.+.. ...|+++.+.. .+|...+++.+.++.+
T Consensus 100 ~~g~d~V~l~~g-~p--~~~~-~~l~~~g~~v~~-~v~s~~~a~~a~~~G-aD~i~v~g~~~GG~~G~~~~~~ll~~i~~ 173 (326)
T 3bo9_A 100 EEKVPVVTFGAG-NP--TKYI-RELKENGTKVIP-VVASDSLARMVERAG-ADAVIAEGMESGGHIGEVTTFVLVNKVSR 173 (326)
T ss_dssp HTTCSEEEEESS-CC--HHHH-HHHHHTTCEEEE-EESSHHHHHHHHHTT-CSCEEEECTTSSEECCSSCHHHHHHHHHH
T ss_pred HCCCCEEEECCC-Cc--HHHH-HHHHHcCCcEEE-EcCCHHHHHHHHHcC-CCEEEEECCCCCccCCCccHHHHHHHHHH
Confidence 334 44554322 22 2233 233445666542 335667776666553 77888876542 2355667888888888
Q ss_pred hcCCEEEEeCCCCCCCc-cchhccCCcEEE
Q 012321 324 KKGAIVCIDGTFATPLN-QKALSLGADLVL 352 (466)
Q Consensus 324 ~~gillIvD~t~a~~~~-~~pl~~gaDivv 352 (466)
..+++++.+.=..++-. ...+..|+|.|.
T Consensus 174 ~~~iPviaaGGI~~~~dv~~al~~GA~gV~ 203 (326)
T 3bo9_A 174 SVNIPVIAAGGIADGRGMAAAFALGAEAVQ 203 (326)
T ss_dssp HCSSCEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred HcCCCEEEECCCCCHHHHHHHHHhCCCEEE
Confidence 88999999875443211 233445666544
No 259
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=36.26 E-value=1.4e+02 Score=30.64 Aligned_cols=125 Identities=18% Similarity=0.245 Sum_probs=64.3
Q ss_pred hHHHHHHHHHhhhCC----------CcEEEe----CCHHH-HHHHHHHHhccCCCEE-EEcCCCc-cchHHHHHhhcccC
Q 012321 211 TTVVVEEKMSALEGA----------ESTVIM----ASGMS-ASTVMLLALVPAGGHI-VTTTDCY-RKTRIFIETVLPKM 273 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~----------e~~v~~----~SG~a-Ai~~al~all~pGD~V-Lv~~~~y-~~t~~~~~~~l~~~ 273 (466)
..+.+.+.|.++.+. ...+++ ++|=. .+..+...+...|.+| ++..+.| ++....+.......
T Consensus 75 v~~~l~~eL~~~L~~~~~~~~~~~~p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~aa~eqL~~~~~~~ 154 (443)
T 3dm5_A 75 IIKIVYEELTKFLGTEAKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRY 154 (443)
T ss_dssp HHHHHHHHHHHHTTSSCCCCCCCSSSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhcCcccccccCCCCeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHHhc
Confidence 355667777776652 223333 22322 2222333445566554 4444444 44445555555667
Q ss_pred CcEEEEeC-CCCHHHH-----HHhccCCCceEEEEeCCCCCCc---ccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 274 GITATVID-PADMEGL-----EAALNNNNVSLFFTESPTNPFL---RCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 274 gi~v~~vd-~~D~e~L-----e~ai~~~~tklV~lesPsNPtG---~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
|+++...+ ..|+.++ +.+-.. ...+|++++|.-..- ...++..|.+..+...+++|+|.+.+
T Consensus 155 gvpv~~~~~~~dp~~i~~~al~~a~~~-~~DvVIIDTaGrl~~d~~lm~el~~i~~~~~pd~vlLVvDA~~g 225 (443)
T 3dm5_A 155 HIEVFGNPQEKDAIKLAKEGVDYFKSK-GVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIG 225 (443)
T ss_dssp TCEEECCTTCCCHHHHHHHHHHHHHHT-TCSEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGG
T ss_pred CCcEEecCCCCCHHHHHHHHHHHHHhC-CCCEEEEECCCcccchHHHHHHHHHHHHhhcCceEEEEEeCCCc
Confidence 87765432 2354333 232222 368999999852111 11124444444445678999998753
No 260
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=35.73 E-value=64 Score=30.83 Aligned_cols=70 Identities=20% Similarity=0.356 Sum_probs=41.7
Q ss_pred CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------C---CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHH
Q 012321 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (466)
Q Consensus 248 pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~------~---D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I 318 (466)
++..+++..+.|+- +++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+
T Consensus 178 ~~~~~v~~H~af~Y-------f~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 243 (286)
T 3gi1_A 178 RSKTFVTQHTAFSY-------LAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIA 243 (286)
T ss_dssp SCCEEEEEESCCHH-------HHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHH
T ss_pred CCCEEEEECCchHH-------HHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 56778887666652 34566776544321 1 3555666666666888888654443 233
Q ss_pred HHHHHhcCCEEEE
Q 012321 319 SDLCHKKGAIVCI 331 (466)
Q Consensus 319 ~ela~~~gillIv 331 (466)
-.++++.|+.+++
T Consensus 244 ~~la~~~g~~v~~ 256 (286)
T 3gi1_A 244 HAIAKSTGAKVKT 256 (286)
T ss_dssp HHHHHTTTCEEEE
T ss_pred HHHHHHhCCeEEE
Confidence 3457788877653
No 261
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=35.71 E-value=1.2e+02 Score=27.67 Aligned_cols=53 Identities=25% Similarity=0.234 Sum_probs=32.6
Q ss_pred CCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCC
Q 012321 273 MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 273 ~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gi 327 (466)
.++++...|..|.+.++++++. ...|+.....++...+.-...+.+.|++.|+
T Consensus 44 ~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 44 QGITVRQADYGDEAALTSALQG--VEKLLLISSSEVGQRAPQHRNVINAAKAAGV 96 (286)
T ss_dssp TTCEEEECCTTCHHHHHHHTTT--CSEEEECC--------CHHHHHHHHHHHHTC
T ss_pred CCCeEEEcCCCCHHHHHHHHhC--CCEEEEeCCCCchHHHHHHHHHHHHHHHcCC
Confidence 3677777888899999999865 5666654432222223335678888888775
No 262
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=35.65 E-value=2.7e+02 Score=27.41 Aligned_cols=109 Identities=20% Similarity=0.185 Sum_probs=55.4
Q ss_pred HHhccCCCEEEEcCCCccch---HHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEe-CCCCC------Ccc-
Q 012321 243 LALVPAGGHIVTTTDCYRKT---RIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTE-SPTNP------FLR- 311 (466)
Q Consensus 243 ~all~pGD~VLv~~~~y~~t---~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~le-sPsNP------tG~- 311 (466)
..++..|-.+|+.+..++.. ...++.+.+.+++.+..-...+.+..+.+++.. ...|.+. .|... +|.
T Consensus 111 ~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aG-aD~I~VG~~~Gs~~~tr~~~g~g 189 (361)
T 3khj_A 111 KLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENG-ADGIKVGIGPGSICTTRIVAGVG 189 (361)
T ss_dssp HHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTT-CSEEEECSSCCTTCCHHHHTCBC
T ss_pred HHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcC-cCEEEEecCCCcCCCcccccCCC
Confidence 34455563344433334322 223333333346665433445778887777653 6777772 12211 111
Q ss_pred cccH---HHHHHHHHhcCCEEEEeCCCCCC-CccchhccCCcEEE
Q 012321 312 CVDV---KLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 312 v~dl---~~I~ela~~~gillIvD~t~a~~-~~~~pl~~gaDivv 352 (466)
..++ .++.+++++.++++|.|.=..++ -..+.+..|+|.|.
T Consensus 190 ~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~ 234 (361)
T 3khj_A 190 VPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVM 234 (361)
T ss_dssp CCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEE
T ss_pred CCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 1233 45555567789999999654322 12344556777544
No 263
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=35.42 E-value=15 Score=34.12 Aligned_cols=105 Identities=10% Similarity=0.103 Sum_probs=65.0
Q ss_pred hHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHh-c-cCCCEEEE--c-CCC-ccchHHHHHhhcccCCcEEEEeC
Q 012321 211 TTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL-V-PAGGHIVT--T-TDC-YRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~lA~l~g~---e~~v~~~SG~aAi~~al~al-l-~pGD~VLv--~-~~~-y~~t~~~~~~~l~~~gi~v~~vd 281 (466)
.++.|.+.+.+.+|. ...++++.|..+-.+ +..+ . ..|=+++. + +|. -.+ . ....|+++..
T Consensus 67 ~V~~L~~~i~~~Lg~~~~~~V~IvGaG~lG~aL-a~~~~~~~~g~~iVg~~D~dp~~kiG------~-~~i~GvpV~~-- 136 (212)
T 3keo_A 67 DVKKLMNFFAEILNDHSTTNVMLVGCGNIGRAL-LHYRFHDRNKMQISMAFDLDSNDLVG------K-TTEDGIPVYG-- 136 (212)
T ss_dssp EHHHHHHHHHHHTTTTSCEEEEEECCSHHHHHH-TTCCCCTTSSEEEEEEEECTTSTTTT------C-BCTTCCBEEE--
T ss_pred EHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHH-HHhhhcccCCeEEEEEEeCCchhccC------c-eeECCeEEeC--
Confidence 488999999998875 357888888855432 2222 2 22323332 1 111 111 0 0123666642
Q ss_pred CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC
Q 012321 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 282 ~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t 334 (466)
.+++++.+++.++..++++.|+. ..+++++.+.+.|+.-|..=+
T Consensus 137 ---~~dL~~~v~~~~Id~vIIAvPs~------~aq~v~d~lv~~GIk~I~nFa 180 (212)
T 3keo_A 137 ---ISTINDHLIDSDIETAILTVPST------EAQEVADILVKAGIKGILSFS 180 (212)
T ss_dssp ---GGGHHHHC-CCSCCEEEECSCGG------GHHHHHHHHHHHTCCEEEECS
T ss_pred ---HHHHHHHHHHcCCCEEEEecCch------hHHHHHHHHHHcCCCEEEEcC
Confidence 46677778776689999988883 457899999999988777643
No 264
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=35.28 E-value=48 Score=30.49 Aligned_cols=36 Identities=8% Similarity=-0.077 Sum_probs=31.3
Q ss_pred CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE
Q 012321 296 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 296 ~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIv 331 (466)
++..|+.|-..|+.|.....+++.++|++||+.++.
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 367888888778999999999999999999987763
No 265
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=34.83 E-value=2e+02 Score=24.62 Aligned_cols=102 Identities=11% Similarity=0.052 Sum_probs=54.2
Q ss_pred HHHHHHHHhhhCCCcEEEeCCHHHHHHHHHH--HhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHH
Q 012321 213 VVVEEKMSALEGAESTVIMASGMSASTVMLL--ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEA 290 (466)
Q Consensus 213 ~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~--all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ 290 (466)
+.+++.+..+.+++..++++.|.....+... .+..-|-++....+. . ..
T Consensus 25 ~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~---------------------------~--~~ 75 (186)
T 1m3s_A 25 EEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEI---------------------------L--TP 75 (186)
T ss_dssp HHHHHHHHHHHHCSCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTST---------------------------T--CC
T ss_pred HHHHHHHHHHHcCCeEEEEecCHHHHHHHHHHHHHHhcCCeEEEeCcc---------------------------c--cc
Confidence 3455555555567789999999854332221 122334333332111 0 11
Q ss_pred hccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEE--EeCCCCCCCccchhccCCcEEEec
Q 012321 291 ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLHS 354 (466)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillI--vD~t~a~~~~~~pl~~gaDivv~S 354 (466)
.++++ .-+|++ +. .|...++-++++.++++|+.+| .|+ ...++...+|+++..
T Consensus 76 ~~~~~-d~vI~i-S~---sG~t~~~~~~~~~ak~~g~~vi~IT~~------~~s~l~~~ad~~l~~ 130 (186)
T 1m3s_A 76 PLAEG-DLVIIG-SG---SGETKSLIHTAAKAKSLHGIVAALTIN------PESSIGKQADLIIRM 130 (186)
T ss_dssp CCCTT-CEEEEE-CS---SSCCHHHHHHHHHHHHTTCEEEEEESC------TTSHHHHHCSEEEEC
T ss_pred CCCCC-CEEEEE-cC---CCCcHHHHHHHHHHHHCCCEEEEEECC------CCCchHHhCCEEEEe
Confidence 23443 334444 33 3666788889999999997554 332 233454457776653
No 266
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=34.00 E-value=1.7e+02 Score=27.45 Aligned_cols=108 Identities=14% Similarity=0.062 Sum_probs=54.8
Q ss_pred HHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEE-EeCC-CCHHHHHHhccCCCceEEEEeCCCCCCccccc----
Q 012321 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITAT-VIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---- 314 (466)
Q Consensus 242 l~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~-~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~d---- 314 (466)
+..+...| |-|++++-.+.....+. ..+++.|++.. .+.+ .+.+.++...... ...|++.+..--||...+
T Consensus 115 ~~~~~~aGadgii~~d~~~e~~~~~~-~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~-~g~v~~~s~~G~tG~~~~~~~~ 192 (268)
T 1qop_A 115 YARCEQVGVDSVLVADVPVEESAPFR-QAALRHNIAPIFICPPNADDDLLRQVASYG-RGYTYLLSRSGVTGAENRGALP 192 (268)
T ss_dssp HHHHHHHTCCEEEETTCCGGGCHHHH-HHHHHTTCEEECEECTTCCHHHHHHHHHHC-CSCEEEESSSSCCCSSSCC--C
T ss_pred HHHHHHcCCCEEEEcCCCHHHHHHHH-HHHHHcCCcEEEEECCCCCHHHHHHHHhhC-CCcEEEEecCCcCCCccCCCch
Confidence 33344445 66777776654433333 44566777643 2333 4456565544332 235666566556776332
Q ss_pred -HHHHHHHHHhcCCEEEEeCCCCCCCccch-hccCCcEE
Q 012321 315 -VKLVSDLCHKKGAIVCIDGTFATPLNQKA-LSLGADLV 351 (466)
Q Consensus 315 -l~~I~ela~~~gillIvD~t~a~~~~~~p-l~~gaDiv 351 (466)
.+.|.++.+..++++++|.=..++-.... +..|+|.+
T Consensus 193 ~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~v 231 (268)
T 1qop_A 193 LHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGA 231 (268)
T ss_dssp CHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEE
Confidence 44555554444677888643332221222 34456643
No 267
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=33.37 E-value=95 Score=29.66 Aligned_cols=97 Identities=15% Similarity=0.070 Sum_probs=58.2
Q ss_pred EEEEcCCCccchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEE
Q 012321 251 HIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV 329 (466)
Q Consensus 251 ~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gill 329 (466)
+|++....|.+....+..+.+..++.+..-|. .|+.++.++..-. ...|.+-... ....+++++.+.|++.|..+
T Consensus 97 sVltd~~~f~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~G-AD~VlLi~a~---L~~~~l~~l~~~a~~lGl~~ 172 (272)
T 3tsm_A 97 SVLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWG-ADCILIIMAS---VDDDLAKELEDTAFALGMDA 172 (272)
T ss_dssp EEECCSTTTCCCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTT-CSEEEEETTT---SCHHHHHHHHHHHHHTTCEE
T ss_pred EEeccccccCCCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcC-CCEEEEcccc---cCHHHHHHHHHHHHHcCCeE
Confidence 46666666666666665555555666644443 4666777766543 5666663332 22245788999999999988
Q ss_pred EEeCCCCCCCccchhccCCcEEE
Q 012321 330 CIDGTFATPLNQKALSLGADLVL 352 (466)
Q Consensus 330 IvD~t~a~~~~~~pl~~gaDivv 352 (466)
++|-.-.. -....+..|+|++-
T Consensus 173 lvevh~~e-El~~A~~~ga~iIG 194 (272)
T 3tsm_A 173 LIEVHDEA-EMERALKLSSRLLG 194 (272)
T ss_dssp EEEECSHH-HHHHHTTSCCSEEE
T ss_pred EEEeCCHH-HHHHHHhcCCCEEE
Confidence 88753111 11334456777653
No 268
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=33.19 E-value=38 Score=31.60 Aligned_cols=128 Identities=13% Similarity=0.131 Sum_probs=65.3
Q ss_pred ccCCCCchhHHHHHHHHHh-hh--C---CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE
Q 012321 203 EYGRYGNPTTVVVEEKMSA-LE--G---AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 203 ~Y~R~~~p~~~~Lee~lA~-l~--g---~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~ 276 (466)
.|.++ ||.+..|...|-+ +. + ++.++-+++|+......+.-.+.+..+|+..+..-.....+.+...+.-++.
T Consensus 51 e~r~w-~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~ 129 (233)
T 4df3_A 51 EYREW-NAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIF 129 (233)
T ss_dssp EEEEC-CTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEE
T ss_pred eeeeE-CCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCee
Confidence 35443 6888777655543 21 1 2456666777654555555567777788877665444333332222333566
Q ss_pred EEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC
Q 012321 277 ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 277 v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIvD~t 334 (466)
....+..+++...... . ...+|+...+. |.-...-+.++..+.+.-|.+++++..
T Consensus 130 ~V~~d~~~p~~~~~~~-~-~vDvVf~d~~~-~~~~~~~l~~~~r~LKpGG~lvI~ik~ 184 (233)
T 4df3_A 130 PILGDARFPEKYRHLV-E-GVDGLYADVAQ-PEQAAIVVRNARFFLRDGGYMLMAIKA 184 (233)
T ss_dssp EEESCTTCGGGGTTTC-C-CEEEEEECCCC-TTHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEeccCcccccccc-c-eEEEEEEeccC-ChhHHHHHHHHHHhccCCCEEEEEEec
Confidence 6555655555443222 2 36777764443 210000123333334445666666644
No 269
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=32.57 E-value=1.3e+02 Score=28.53 Aligned_cols=89 Identities=10% Similarity=0.025 Sum_probs=43.8
Q ss_pred HHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEE-eC-CCCHHHHHHhccCCCceEEEEeCCCCCCcccc----c
Q 012321 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-ID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCV----D 314 (466)
Q Consensus 242 l~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~-vd-~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~----d 314 (466)
+..+...| |-|++++-.+.....+. ..++..|++..+ +. ..+.+.++...+.. ...||+-+-.-.||.-. +
T Consensus 116 ~~~~~~aGvdgvii~Dlp~ee~~~~~-~~~~~~gl~~i~liaP~t~~eri~~i~~~~-~gfvY~vS~~GvTG~~~~~~~~ 193 (267)
T 3vnd_A 116 YTKAQAAGVDSVLIADVPVEESAPFS-KAAKAHGIAPIFIAPPNADADTLKMVSEQG-EGYTYLLSRAGVTGTESKAGEP 193 (267)
T ss_dssp HHHHHHHTCCEEEETTSCGGGCHHHH-HHHHHTTCEEECEECTTCCHHHHHHHHHHC-CSCEEESCCCCCC--------C
T ss_pred HHHHHHcCCCEEEeCCCCHhhHHHHH-HHHHHcCCeEEEEECCCCCHHHHHHHHHhC-CCcEEEEecCCCCCCccCCcHH
Confidence 33444444 66777766555433333 446667776543 33 33456666555432 33566644443456442 3
Q ss_pred HHHHHHHHHhc-CCEEEEe
Q 012321 315 VKLVSDLCHKK-GAIVCID 332 (466)
Q Consensus 315 l~~I~ela~~~-gillIvD 332 (466)
+.++.+.++++ +++++++
T Consensus 194 ~~~~v~~vr~~~~~pv~vG 212 (267)
T 3vnd_A 194 IENILTQLAEFNAPPPLLG 212 (267)
T ss_dssp HHHHHHHHHTTTCCCEEEC
T ss_pred HHHHHHHHHHhcCCCEEEE
Confidence 44555555553 5666664
No 270
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=32.55 E-value=2.7e+02 Score=24.84 Aligned_cols=120 Identities=14% Similarity=0.195 Sum_probs=60.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc--EEEEeCCCCH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADM 285 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi--~v~~vd~~D~ 285 (466)
..|....+-..+....+...++=+++|+......+...+.++.+|+..+..-. ........+...|+ .+.++.. |.
T Consensus 56 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~-~~~~a~~~~~~~g~~~~i~~~~~-d~ 133 (232)
T 3cbg_A 56 ISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPN-ATAIAKKYWQKAGVAEKISLRLG-PA 133 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH-HHHHHHHHHHHHTCGGGEEEEES-CH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEc-CH
Confidence 45666666666666667677777888774444444444444667776654322 22222222322232 2333322 33
Q ss_pred HH-HHHhccC---CCceEEEEeCCCCCCcccccHHHHHHHHHh---cCCEEEEeCCC
Q 012321 286 EG-LEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTF 335 (466)
Q Consensus 286 e~-Le~ai~~---~~tklV~lesPsNPtG~v~dl~~I~ela~~---~gillIvD~t~ 335 (466)
.+ +.+...+ ....+|++..+ ..+...+.+.+.+ .|.++++|++.
T Consensus 134 ~~~l~~l~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 134 LATLEQLTQGKPLPEFDLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HHHHHHHHTSSSCCCEEEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HHHHHHHHhcCCCCCcCEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 33 3332211 23788988543 2233444444433 36677778764
No 271
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=32.32 E-value=1.9e+02 Score=26.24 Aligned_cols=92 Identities=16% Similarity=0.144 Sum_probs=49.2
Q ss_pred EEeCCHHHHH-HHHHHHhccC--CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCC
Q 012321 229 VIMASGMSAS-TVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 229 v~~~SG~aAi-~~al~all~p--GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesP 305 (466)
+++++|+.-+ ..++..|++. |.+|++....-..... +...++++...|..|.+.++++++. ...|+....
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-----l~~~~~~~~~~D~~d~~~l~~~~~~--~d~vi~~a~ 75 (287)
T 2jl1_A 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-----LADQGVEVRHGDYNQPESLQKAFAG--VSKLLFISG 75 (287)
T ss_dssp EEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-----HHHTTCEEEECCTTCHHHHHHHTTT--CSEEEECCC
T ss_pred EEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-----HhhcCCeEEEeccCCHHHHHHHHhc--CCEEEEcCC
Confidence 4455444222 2334456665 7666553321111111 1123677777888899999999874 566665443
Q ss_pred CCCCc--ccccHHHHHHHHHhcCC
Q 012321 306 TNPFL--RCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 306 sNPtG--~v~dl~~I~ela~~~gi 327 (466)
.++.. .+.-...+.+.|++.|+
T Consensus 76 ~~~~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 76 PHYDNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcCchHHHHHHHHHHHHHHHcCC
Confidence 32211 11123567888888775
No 272
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=32.29 E-value=2.5e+02 Score=24.46 Aligned_cols=120 Identities=15% Similarity=0.173 Sum_probs=61.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc--EEEEeCCCCHH
Q 012321 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (466)
Q Consensus 209 ~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi--~v~~vd~~D~e 286 (466)
.+....+-..+........++=+++|+......+...+.++.+|+..+..-. ........+...|+ .+.++.. |..
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~~-d~~ 120 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEK-HADIARSNIERANLNDRVEVRTG-LAL 120 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHH-HHHHHHHHHHHTTCTTTEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEc-CHH
Confidence 4666667667767666677777788775554444444554667776654322 22233333333333 2333322 332
Q ss_pred H-HHHhccC--CCceEEEEeCCCCCCcccccHHHHHHHHHh---cCCEEEEeCCCC
Q 012321 287 G-LEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTFA 336 (466)
Q Consensus 287 ~-Le~ai~~--~~tklV~lesPsNPtG~v~dl~~I~ela~~---~gillIvD~t~a 336 (466)
+ +...... ....+|++..+ ......+.+.+.+ .|.++++|+...
T Consensus 121 ~~~~~~~~~~~~~fD~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 121 DSLQQIENEKYEPFDFIFIDAD------KQNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HHHHHHHHTTCCCCSEEEECSC------GGGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred HHHHHHHhcCCCCcCEEEEcCC------cHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 2 2222111 13678887544 2233333333332 366888888754
No 273
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=32.25 E-value=93 Score=31.10 Aligned_cols=74 Identities=9% Similarity=0.025 Sum_probs=45.2
Q ss_pred ccCCCEEEEcCCCccch------HHHHHhhcccCCcEEEEeCCC----------C---HHHHHHhccCCCceEEEEeCCC
Q 012321 246 VPAGGHIVTTTDCYRKT------RIFIETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 246 l~pGD~VLv~~~~y~~t------~~~~~~~l~~~gi~v~~vd~~----------D---~e~Le~ai~~~~tklV~lesPs 306 (466)
+++||+|-+..|..+.. .......++.+|.++.+-+.. | .++|.+++.+..+++|+...-.
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 67889888888876542 111223466788888765421 2 5677788876568999875544
Q ss_pred CCCccc---ccHHHHH
Q 012321 307 NPFLRC---VDVKLVS 319 (466)
Q Consensus 307 NPtG~v---~dl~~I~ 319 (466)
.-+-++ .|.+.|.
T Consensus 120 yga~rlLp~LD~~~i~ 135 (371)
T 3tla_A 120 DNSNSLLPFLDYDAII 135 (371)
T ss_dssp SCGGGGGGGSCHHHHH
T ss_pred ccHHHHHhhcChhhHH
Confidence 333344 3555553
No 274
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=31.75 E-value=87 Score=30.55 Aligned_cols=74 Identities=16% Similarity=0.134 Sum_probs=46.5
Q ss_pred hccCCCEEEEcCCCccc------hHHHHHhhcccCCcEEEEeCCC----------C---HHHHHHhccCCCceEEEEeCC
Q 012321 245 LVPAGGHIVTTTDCYRK------TRIFIETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 245 ll~pGD~VLv~~~~y~~------t~~~~~~~l~~~gi~v~~vd~~----------D---~e~Le~ai~~~~tklV~lesP 305 (466)
.+++||+|-+..|..+. ........++.+|.++.+-+.. | .++|.+++.+..+++|+...-
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 36899999888887542 1222234467789998875421 1 567788887666999987554
Q ss_pred CCCCcccc---cHHHH
Q 012321 306 TNPFLRCV---DVKLV 318 (466)
Q Consensus 306 sNPtG~v~---dl~~I 318 (466)
..-+-++. |.+.|
T Consensus 88 G~g~~rlL~~LD~~~i 103 (327)
T 4h1h_A 88 GFNSNQLLPYLDYDLI 103 (327)
T ss_dssp CSCGGGGGGGCCHHHH
T ss_pred chhHHHHhhhcchhhh
Confidence 44344443 45544
No 275
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=31.43 E-value=24 Score=35.83 Aligned_cols=32 Identities=9% Similarity=0.048 Sum_probs=27.5
Q ss_pred CCCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 304 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 304 sPsNPtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
.+....|...|++++++.||++|+.||+|-++
T Consensus 56 ~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 56 ELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp CSCBTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ccCCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 34445788899999999999999999999875
No 276
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=31.35 E-value=1.8e+02 Score=24.88 Aligned_cols=103 Identities=14% Similarity=0.045 Sum_probs=54.6
Q ss_pred HHHHHHHHhhhCCCcEEEeCCHHHHHHHHHH--HhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHH
Q 012321 213 VVVEEKMSALEGAESTVIMASGMSASTVMLL--ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEA 290 (466)
Q Consensus 213 ~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~--all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ 290 (466)
+.+++.+..+..++..++++.|.....+... .+..-|..+....+. . ..
T Consensus 28 ~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~---------------------------~--~~ 78 (180)
T 1jeo_A 28 NKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGET---------------------------T--TP 78 (180)
T ss_dssp HHHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHTTCCEEETTST---------------------------T--CC
T ss_pred HHHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCC---------------------------c--cc
Confidence 4555555556667889999999854422211 122334444332111 0 01
Q ss_pred hccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCE--EEEeCCCCCCCccchhccCCcEEEeccc
Q 012321 291 ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAI--VCIDGTFATPLNQKALSLGADLVLHSAT 356 (466)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gil--lIvD~t~a~~~~~~pl~~gaDivv~S~s 356 (466)
.++++ .-+|++ +. .|...++-++++.++++|+. .|.|+. .. +...+|+++...+
T Consensus 79 ~~~~~-d~vi~i-S~---sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s-l~~~ad~~l~~~~ 134 (180)
T 1jeo_A 79 SYEKD-DLLILI-SG---SGRTESVLTVAKKAKNINNNIIAIVCEC------GN-VVEFADLTIPLEV 134 (180)
T ss_dssp CCCTT-CEEEEE-ES---SSCCHHHHHHHHHHHTTCSCEEEEESSC------CG-GGGGCSEEEECCC
T ss_pred cCCCC-CEEEEE-eC---CCCcHHHHHHHHHHHHCCCcEEEEeCCC------Ch-HHHhCCEEEEeCC
Confidence 23333 334444 33 36667888899999998864 444432 12 3344677665443
No 277
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=31.33 E-value=1.7e+02 Score=25.83 Aligned_cols=41 Identities=20% Similarity=0.105 Sum_probs=27.0
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCCCCCCccchhccCCcEEEe
Q 012321 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLH 353 (466)
Q Consensus 309 tG~v~dl~~I~ela~~~gillIvD~t~a~~~~~~pl~~gaDivv~ 353 (466)
.|...++-++++.|++.|+.+|.= +.....++..-+|+++.
T Consensus 99 SG~t~~~i~~~~~ak~~g~~vI~I----T~~~~s~La~~ad~~l~ 139 (200)
T 1vim_A 99 SGETTSVVNISKKAKDIGSKLVAV----TGKRDSSLAKMADVVMV 139 (200)
T ss_dssp SSCCHHHHHHHHHHHHHTCEEEEE----ESCTTSHHHHHCSEEEE
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEE----ECCCCChHHHhCCEEEE
Confidence 477788889999999998765431 12223455555787775
No 278
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=30.92 E-value=1.5e+02 Score=27.12 Aligned_cols=54 Identities=13% Similarity=0.171 Sum_probs=36.4
Q ss_pred cCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCC-CCC-cccccHHHHHHHHHhcCC
Q 012321 272 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPT-NPF-LRCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 272 ~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPs-NPt-G~v~dl~~I~ela~~~gi 327 (466)
..++++...|..|.+.++++++. ...|+..... ++. ..+.....+.+.|++.|+
T Consensus 43 ~~~v~~~~~D~~d~~~l~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 43 RGKVSVRQLDYFNQESMVEAFKG--MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp BTTBEEEECCTTCHHHHHHHTTT--CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred hCCCEEEEcCCCCHHHHHHHHhC--CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCC
Confidence 45788888899999999999975 5666654332 111 112235678888988885
No 279
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=30.86 E-value=93 Score=30.12 Aligned_cols=69 Identities=16% Similarity=0.259 Sum_probs=42.4
Q ss_pred CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------C---CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHH
Q 012321 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (466)
Q Consensus 248 pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~------~---D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I 318 (466)
++..+++..+.|+ .+++.+|++...+.. . ++.+|.+.++++++++||.|.-.+ -+.+
T Consensus 189 ~~~~~v~~H~af~-------Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~-------~~~~ 254 (312)
T 2o1e_A 189 EKKEFITQHTAFG-------YLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIAS-------SKVA 254 (312)
T ss_dssp SCCEEEESSCTTH-------HHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCC-------HHHH
T ss_pred CCCEEEEECCchH-------HHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC-------hHHH
Confidence 4677888666554 234567777654421 1 355666667776788998765443 2444
Q ss_pred HHHHHhcCCEEE
Q 012321 319 SDLCHKKGAIVC 330 (466)
Q Consensus 319 ~ela~~~gillI 330 (466)
..++++.|+.++
T Consensus 255 ~~ia~e~g~~v~ 266 (312)
T 2o1e_A 255 DTLASEIGAKTE 266 (312)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHHhCCcEE
Confidence 556778887764
No 280
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=30.43 E-value=61 Score=31.65 Aligned_cols=103 Identities=16% Similarity=0.205 Sum_probs=56.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCC-EEEEcCCC---ccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEE
Q 012321 226 ESTVIMASGMSASTVMLLALVPAGG-HIVTTTDC---YRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (466)
Q Consensus 226 e~~v~~~SG~aAi~~al~all~pGD-~VLv~~~~---y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~ 301 (466)
..+++++.|..+ ..++..+...|- +|.+.+-. ......+...+....+.++..++..+.+++.+.+.+ ..+|+
T Consensus 155 k~~lVlGaGG~g-~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~--aDiII 231 (315)
T 3tnl_A 155 KKMTICGAGGAA-TAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAE--SVIFT 231 (315)
T ss_dssp SEEEEECCSHHH-HHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHT--CSEEE
T ss_pred CEEEEECCChHH-HHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcC--CCEEE
Confidence 467777776433 334445566674 67665544 333333333333334566666666677778877764 57888
Q ss_pred EeCCCCCCcc----cc-cHHHHHHHHHhcCCEEEEeCCCCC
Q 012321 302 TESPTNPFLR----CV-DVKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 302 lesPsNPtG~----v~-dl~~I~ela~~~gillIvD~t~a~ 337 (466)
-++|.-..+. .. +.+.+ ..-.+++|-+|..
T Consensus 232 NaTp~Gm~~~~~~~p~~~~~~l------~~~~~V~DlvY~P 266 (315)
T 3tnl_A 232 NATGVGMKPFEGETLLPSADML------RPELIVSDVVYKP 266 (315)
T ss_dssp ECSSTTSTTSTTCCSCCCGGGC------CTTCEEEESCCSS
T ss_pred ECccCCCCCCCCCCCCCcHHHc------CCCCEEEEeccCC
Confidence 7777532221 12 22222 1235778988863
No 281
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=30.43 E-value=1e+02 Score=28.52 Aligned_cols=85 Identities=12% Similarity=0.067 Sum_probs=48.9
Q ss_pred HHHHhccCCCEEEEc-CCCc----cchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccH
Q 012321 241 MLLALVPAGGHIVTT-TDCY----RKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV 315 (466)
Q Consensus 241 al~all~pGD~VLv~-~~~y----~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl 315 (466)
++..|++.|.+|++. +..- ......+. .+...++++...|..|.+.+.++++. ...|+...... .+...
T Consensus 20 l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~-~l~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~a~~~---~~~~~ 93 (308)
T 1qyc_A 20 VAKASLDLGHPTFLLVRESTASSNSEKAQLLE-SFKASGANIVHGSIDDHASLVEAVKN--VDVVISTVGSL---QIESQ 93 (308)
T ss_dssp HHHHHHHTTCCEEEECCCCCTTTTHHHHHHHH-HHHTTTCEEECCCTTCHHHHHHHHHT--CSEEEECCCGG---GSGGG
T ss_pred HHHHHHhCCCCEEEEECCcccccCHHHHHHHH-HHHhCCCEEEEeccCCHHHHHHHHcC--CCEEEECCcch---hhhhH
Confidence 344566677666553 3221 11111111 12345788877888899999999875 56666543321 13334
Q ss_pred HHHHHHHHhcC-CEEEE
Q 012321 316 KLVSDLCHKKG-AIVCI 331 (466)
Q Consensus 316 ~~I~ela~~~g-illIv 331 (466)
..+.+.|++.| +--++
T Consensus 94 ~~l~~aa~~~g~v~~~v 110 (308)
T 1qyc_A 94 VNIIKAIKEVGTVKRFF 110 (308)
T ss_dssp HHHHHHHHHHCCCSEEE
T ss_pred HHHHHHHHhcCCCceEe
Confidence 67888888877 53333
No 282
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=30.32 E-value=2.3e+02 Score=23.44 Aligned_cols=95 Identities=16% Similarity=0.135 Sum_probs=53.7
Q ss_pred CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcc-cCCcEEEEeCCCCHHHHHHh-ccCCCceEEEE
Q 012321 225 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVIDPADMEGLEAA-LNNNNVSLFFT 302 (466)
Q Consensus 225 ~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~-~~gi~v~~vd~~D~e~Le~a-i~~~~tklV~l 302 (466)
....++++.|.-+...+ ..+...|-+|++.+..-.. + ..+. ..|+.+...+..+.+.++++ +.. ..+|++
T Consensus 19 ~~~v~IiG~G~iG~~la-~~L~~~g~~V~vid~~~~~----~-~~~~~~~g~~~~~~d~~~~~~l~~~~~~~--ad~Vi~ 90 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIA-NLASSSGHSVVVVDKNEYA----F-HRLNSEFSGFTVVGDAAEFETLKECGMEK--ADMVFA 90 (155)
T ss_dssp CCEEEEECCSHHHHHHH-HHHHHTTCEEEEEESCGGG----G-GGSCTTCCSEEEESCTTSHHHHHTTTGGG--CSEEEE
T ss_pred CCcEEEECCCHHHHHHH-HHHHhCCCeEEEEECCHHH----H-HHHHhcCCCcEEEecCCCHHHHHHcCccc--CCEEEE
Confidence 35678888887555433 3445567677665432221 1 2233 45776655566677777765 443 678888
Q ss_pred eCCCCCCcccccHHHHHHHHHh-cC-CEEEEe
Q 012321 303 ESPTNPFLRCVDVKLVSDLCHK-KG-AIVCID 332 (466)
Q Consensus 303 esPsNPtG~v~dl~~I~ela~~-~g-illIvD 332 (466)
++++. .....+.+++++ .+ ..++..
T Consensus 91 ~~~~~-----~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 91 FTNDD-----STNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp CSSCH-----HHHHHHHHHHHHTSCCSEEEEE
T ss_pred EeCCc-----HHHHHHHHHHHHHCCCCeEEEE
Confidence 76651 123456667776 44 344443
No 283
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=30.08 E-value=2.8e+02 Score=24.46 Aligned_cols=86 Identities=15% Similarity=0.097 Sum_probs=50.6
Q ss_pred EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCC
Q 012321 228 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 307 (466)
Q Consensus 228 ~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsN 307 (466)
.++++.|.-+...+ ..+...|..|++-+... ..++.+.+..++.+...|..|.+.++++--+ +.++|++.+++.
T Consensus 3 iiIiG~G~~G~~la-~~L~~~g~~v~vid~~~----~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~-~ad~vi~~~~~d 76 (218)
T 3l4b_C 3 VIIIGGETTAYYLA-RSMLSRKYGVVIINKDR----ELCEEFAKKLKATIIHGDGSHKEILRDAEVS-KNDVVVILTPRD 76 (218)
T ss_dssp EEEECCHHHHHHHH-HHHHHTTCCEEEEESCH----HHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-TTCEEEECCSCH
T ss_pred EEEECCCHHHHHHH-HHHHhCCCeEEEEECCH----HHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-cCCEEEEecCCc
Confidence 56777777554333 45556676666544322 2222333345778877788898988876323 268888866652
Q ss_pred CCcccccHHHHHHHHHh
Q 012321 308 PFLRCVDVKLVSDLCHK 324 (466)
Q Consensus 308 PtG~v~dl~~I~ela~~ 324 (466)
..-..++..+++
T Consensus 77 -----~~n~~~~~~a~~ 88 (218)
T 3l4b_C 77 -----EVNLFIAQLVMK 88 (218)
T ss_dssp -----HHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHH
Confidence 112345666665
No 284
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=30.00 E-value=1.9e+02 Score=25.19 Aligned_cols=91 Identities=11% Similarity=0.087 Sum_probs=48.6
Q ss_pred EEEeC-CHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCC
Q 012321 228 TVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 228 ~v~~~-SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPs 306 (466)
.++++ +|.-+ ..++..|++.|.+|++..-.-... ..+ ..++++...|..|.+.+++++++ ..+|+.....
T Consensus 7 ilItGatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~-----~~~-~~~~~~~~~Dl~d~~~~~~~~~~--~d~vi~~a~~ 77 (227)
T 3dhn_A 7 IVLIGASGFVG-SALLNEALNRGFEVTAVVRHPEKI-----KIE-NEHLKVKKADVSSLDEVCEVCKG--ADAVISAFNP 77 (227)
T ss_dssp EEEETCCHHHH-HHHHHHHHTTTCEEEEECSCGGGC-----CCC-CTTEEEECCCTTCHHHHHHHHTT--CSEEEECCCC
T ss_pred EEEEcCCchHH-HHHHHHHHHCCCEEEEEEcCcccc-----hhc-cCceEEEEecCCCHHHHHHHhcC--CCEEEEeCcC
Confidence 44443 34433 234456677788877654322110 001 13566666788899999999974 5666654322
Q ss_pred CC-Ccccc-----cHHHHHHHHHhcCC
Q 012321 307 NP-FLRCV-----DVKLVSDLCHKKGA 327 (466)
Q Consensus 307 NP-tG~v~-----dl~~I~ela~~~gi 327 (466)
.. .-... -...+.+.|++.++
T Consensus 78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~ 104 (227)
T 3dhn_A 78 GWNNPDIYDETIKVYLTIIDGVKKAGV 104 (227)
T ss_dssp ------CCSHHHHHHHHHHHHHHHTTC
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhCC
Confidence 11 01111 13567777877764
No 285
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=29.23 E-value=1.4e+02 Score=27.92 Aligned_cols=60 Identities=15% Similarity=0.199 Sum_probs=39.6
Q ss_pred cCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC-CEEEEeCCCC
Q 012321 272 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFA 336 (466)
Q Consensus 272 ~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~g-illIvD~t~a 336 (466)
..++++...|..|.+.+.++++. ...|+.+.... .+.-...+.+.|++.| +--++=..++
T Consensus 55 ~~~v~~v~~D~~d~~~l~~a~~~--~d~vi~~a~~~---~~~~~~~l~~aa~~~g~v~~~v~S~~g 115 (321)
T 3c1o_A 55 SMGVTIIEGEMEEHEKMVSVLKQ--VDIVISALPFP---MISSQIHIINAIKAAGNIKRFLPSDFG 115 (321)
T ss_dssp HTTCEEEECCTTCHHHHHHHHTT--CSEEEECCCGG---GSGGGHHHHHHHHHHCCCCEEECSCCS
T ss_pred cCCcEEEEecCCCHHHHHHHHcC--CCEEEECCCcc---chhhHHHHHHHHHHhCCccEEeccccc
Confidence 35788888898999999999975 56666543321 1334578888888887 6433423343
No 286
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=29.13 E-value=97 Score=30.38 Aligned_cols=75 Identities=17% Similarity=0.140 Sum_probs=47.7
Q ss_pred hccCCCEEEEcCCCccch---HHHH---HhhcccCCcEEEEeCCC----------C---HHHHHHhccCCCceEEEEeCC
Q 012321 245 LVPAGGHIVTTTDCYRKT---RIFI---ETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 245 ll~pGD~VLv~~~~y~~t---~~~~---~~~l~~~gi~v~~vd~~----------D---~e~Le~ai~~~~tklV~lesP 305 (466)
.+++||+|-+..|..+.. ...+ ...++.+|.++.+-+.. | .++|.+++.+..+++|+...-
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 368999998888887643 2222 23467789998875421 2 567777887656899987554
Q ss_pred CCCCccc---ccHHHHH
Q 012321 306 TNPFLRC---VDVKLVS 319 (466)
Q Consensus 306 sNPtG~v---~dl~~I~ 319 (466)
..-+-++ .|.+.|.
T Consensus 88 G~g~~rlL~~lD~~~i~ 104 (331)
T 4e5s_A 88 GYNSNGLLKYLDYDLIR 104 (331)
T ss_dssp CSCGGGGGGGCCHHHHH
T ss_pred cccHHHHHhhcChhHHH
Confidence 4333333 3555443
No 287
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=28.89 E-value=1.1e+02 Score=30.02 Aligned_cols=75 Identities=16% Similarity=0.014 Sum_probs=47.1
Q ss_pred hccCCCEEEEcCCCccch------HHHHHhhcccCCcEEEEeCCC----------C---HHHHHHhccCCCceEEEEeCC
Q 012321 245 LVPAGGHIVTTTDCYRKT------RIFIETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 245 ll~pGD~VLv~~~~y~~t------~~~~~~~l~~~gi~v~~vd~~----------D---~e~Le~ai~~~~tklV~lesP 305 (466)
.+++||+|-+..|..+.. .......++.+|.++..-+.. | .++|.+++.+..+++|+...-
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 368899999888887542 112223467789998865421 2 567777887656899987554
Q ss_pred CCCCccc---ccHHHHH
Q 012321 306 TNPFLRC---VDVKLVS 319 (466)
Q Consensus 306 sNPtG~v---~dl~~I~ 319 (466)
..-+-++ .|.+.|.
T Consensus 89 G~g~~rlL~~lD~~~i~ 105 (336)
T 3sr3_A 89 GMNSNSLLPYIDYDAFQ 105 (336)
T ss_dssp CSCGGGGGGGSCHHHHH
T ss_pred cccHHHHhhhcChhHHh
Confidence 4333344 3555543
No 288
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=28.76 E-value=1.4e+02 Score=28.11 Aligned_cols=77 Identities=13% Similarity=0.147 Sum_probs=42.1
Q ss_pred EEEeCCHHHHH-HHHHHHhccCCCEEEEcCCCccchHHHHHhhcc--cCCcEEEEeCCCCHHHHHHhccCCCceEEEEeC
Q 012321 228 TVIMASGMSAS-TVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP--KMGITATVIDPADMEGLEAALNNNNVSLFFTES 304 (466)
Q Consensus 228 ~v~~~SG~aAi-~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~--~~gi~v~~vd~~D~e~Le~ai~~~~tklV~les 304 (466)
.+++++|+..| ..++..|++.|.+|++....-............ ..++.+...|..|.+.++++++..+..+|+-..
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 86 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHFA 86 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEECc
Confidence 45555554333 234456677898887765332222222222111 224566666788999999988743356666433
No 289
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=28.68 E-value=1.6e+02 Score=27.21 Aligned_cols=55 Identities=16% Similarity=0.129 Sum_probs=37.8
Q ss_pred cCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC-CEEEE
Q 012321 272 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCI 331 (466)
Q Consensus 272 ~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~g-illIv 331 (466)
..++++...|..|.+.+.++++. ...|+...... .+.....+.+.|++.| +.-++
T Consensus 54 ~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~a~~~---~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 54 SLGVILLEGDINDHETLVKAIKQ--VDIVICAAGRL---LIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp HTTCEEEECCTTCHHHHHHHHTT--CSEEEECSSSS---CGGGHHHHHHHHHHHCCCSEEE
T ss_pred hCCCEEEEeCCCCHHHHHHHHhC--CCEEEECCccc---ccccHHHHHHHHHhcCCceEEe
Confidence 35788888898899999999975 56666543321 1344577888888887 54333
No 290
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=28.54 E-value=34 Score=35.07 Aligned_cols=31 Identities=10% Similarity=0.009 Sum_probs=26.7
Q ss_pred CCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 305 PsNPtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
+....|...|++++++.||++|+-||+|-++
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3334688899999999999999999999884
No 291
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=27.57 E-value=76 Score=27.43 Aligned_cols=56 Identities=13% Similarity=0.063 Sum_probs=40.0
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCccccc----HHHHH-HHHHhcCC-EEEEeCCCCCCC
Q 012321 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVS-DLCHKKGA-IVCIDGTFATPL 339 (466)
Q Consensus 284 D~e~Le~ai~~~~tklV~lesPsNPtG~v~d----l~~I~-ela~~~gi-llIvD~t~a~~~ 339 (466)
+.+.|.+.+++.++..|+++-|-|..|+.-. .+.++ .++++.++ +..+||.+.+-.
T Consensus 43 ~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts~~ 104 (150)
T 1vhx_A 43 GLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTMA 104 (150)
T ss_dssp CHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCHHH
Confidence 5788999998877999999999887777653 23444 33444565 567799887543
No 292
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=27.53 E-value=35 Score=34.95 Aligned_cols=28 Identities=11% Similarity=0.035 Sum_probs=25.6
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 308 PtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
..|...|++++++.||++|+.||+|-++
T Consensus 78 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 78 KYGTRSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3688889999999999999999999884
No 293
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=27.38 E-value=36 Score=34.86 Aligned_cols=28 Identities=7% Similarity=-0.079 Sum_probs=25.5
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 308 PtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
..|...|++++++.||++|+.||+|-++
T Consensus 76 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 76 KYGTKAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3688889999999999999999999885
No 294
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=27.15 E-value=3e+02 Score=30.28 Aligned_cols=81 Identities=10% Similarity=0.021 Sum_probs=53.3
Q ss_pred CEEEEcC---CCccchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc
Q 012321 250 GHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (466)
Q Consensus 250 D~VLv~~---~~y~~t~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~ 325 (466)
.+|++.. ..|.--..++...+...|+++..... ..++++.++..+.++.+|.+++-. ++....++++.+.+++.
T Consensus 605 ~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~v~~eeiv~aA~e~~adiVglSsl~--~~~~~~~~~vi~~Lr~~ 682 (762)
T 2xij_A 605 PRLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLFQTPREVAQQAVDADVHAVGVSTLA--AGHKTLVPELIKELNSL 682 (762)
T ss_dssp CEEEEECCSSCCCCHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEECS--SCHHHHHHHHHHHHHHT
T ss_pred CEEEEEecCcchhhHHHHHHHHHHHhCCeEEeeCCCCCCHHHHHHHHHHcCCCEEEEeeec--HHHHHHHHHHHHHHHhc
Confidence 4666654 34544445566678888999977653 357777666655568999997654 34444578899888887
Q ss_pred CC---EEEEe
Q 012321 326 GA---IVCID 332 (466)
Q Consensus 326 gi---llIvD 332 (466)
|. +|++=
T Consensus 683 G~~dv~VivG 692 (762)
T 2xij_A 683 GRPDILVMCG 692 (762)
T ss_dssp TCTTSEEEEE
T ss_pred CCCCCEEEEe
Confidence 64 55543
No 295
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=26.84 E-value=2.5e+02 Score=30.70 Aligned_cols=82 Identities=16% Similarity=0.104 Sum_probs=54.8
Q ss_pred CEEEEcC---CCccchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhc
Q 012321 250 GHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (466)
Q Consensus 250 D~VLv~~---~~y~~t~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~ 325 (466)
.+|++.. ..|.--..++...+...|+++..... ..++++.++..+.++.+|.+++-. +.....++++.+.+++.
T Consensus 597 ~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~v~~eeiv~aA~e~~adiVglSsl~--~~~~~~~~~vi~~L~~~ 674 (727)
T 1req_A 597 PRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLFQTPEETARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKL 674 (727)
T ss_dssp CEEEEECBTTCCCCHHHHHHHHHHHHHTCEEEECCTTBCHHHHHHHHHHTTCSEEEEEECS--SCHHHHHHHHHHHHHHT
T ss_pred CEEEEEeCCcchhHHHHHHHHHHHHhCCeEEEeCCCCCCHHHHHHHHHHcCCCEEEEeeec--HhHHHHHHHHHHHHHhc
Confidence 4666654 34544455666678888999977553 357777666655568999997654 33444578888888887
Q ss_pred CC---EEEEeC
Q 012321 326 GA---IVCIDG 333 (466)
Q Consensus 326 gi---llIvD~ 333 (466)
|. ++++=.
T Consensus 675 G~~~i~VivGG 685 (727)
T 1req_A 675 GRPDILITVGG 685 (727)
T ss_dssp TCTTSEEEEEE
T ss_pred CCCCCEEEEcC
Confidence 64 677654
No 296
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=26.76 E-value=37 Score=34.38 Aligned_cols=28 Identities=18% Similarity=0.105 Sum_probs=25.5
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 308 PtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
..|...|++++++.||++|+-||+|-++
T Consensus 82 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 82 RFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3688899999999999999999999885
No 297
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=26.67 E-value=37 Score=35.23 Aligned_cols=30 Identities=17% Similarity=0.133 Sum_probs=26.3
Q ss_pred CCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 306 sNPtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
..-.|...|++++++.||++|+.||+|-++
T Consensus 75 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 75 RTKYGTKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 333688899999999999999999999884
No 298
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=26.35 E-value=79 Score=28.73 Aligned_cols=43 Identities=12% Similarity=0.185 Sum_probs=34.7
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE
Q 012321 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 283 ~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gillIv 331 (466)
.|.++|+++++.. ...||+ -+|.+..++++.+.+|++|-.+++
T Consensus 17 r~~~~l~~al~s~-~~~ifl-----l~g~i~~l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 17 HNQKDMEKILELD-LTYMVM-----LETHVAQLKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSSHHHHHHTTSS-CCEEEE-----CSEETTTHHHHHHHHHHTTCEEEE
T ss_pred cCHHHHHHHHcCC-CCEEEE-----ecCcHHHHHHHHHHHHHcCCeEEE
Confidence 3678999999865 788887 357788999999999999866555
No 299
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=26.33 E-value=1.8e+02 Score=29.75 Aligned_cols=96 Identities=8% Similarity=-0.038 Sum_probs=64.5
Q ss_pred HHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCC-cEEEEeCC--CCHHHHHHhccCCCceEEEEeCCCCCCccc
Q 012321 236 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG-ITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 236 aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~g-i~v~~vd~--~D~e~Le~ai~~~~tklV~lesPsNPtG~v 312 (466)
+++.. +..++.+=+-+.+.+|....-+..+..+.+..+ +.+.--+. .+++.+++.|+..-..+|.+ -+ |-.|.+
T Consensus 283 elid~-y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlI-Kv-nqiGGI 359 (441)
T 3qtp_A 283 GLIAE-YVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLI-KV-NQIGTL 359 (441)
T ss_dssp HHHHH-HHHHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE-CG-GGTCCH
T ss_pred HHHHH-HHHHhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEe-cc-cccccH
Confidence 44433 344555555777888887765555555555555 65543332 36899999887654566666 22 458889
Q ss_pred ccHHHHHHHHHhcCCEEEEeCC
Q 012321 313 VDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 313 ~dl~~I~ela~~~gillIvD~t 334 (466)
.+..+++++|+++|+.+++=..
T Consensus 360 TEalkaa~lA~~~G~~vmvsHr 381 (441)
T 3qtp_A 360 TETFKTIKMAQEKGWGVMASHR 381 (441)
T ss_dssp HHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCeEEEeCC
Confidence 9999999999999998877443
No 300
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=26.27 E-value=1.7e+02 Score=27.86 Aligned_cols=69 Identities=13% Similarity=0.179 Sum_probs=39.4
Q ss_pred CCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC----C---CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHH
Q 012321 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (466)
Q Consensus 248 pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~----~---D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~e 320 (466)
++..+++..+.|+- +++.+|++...+.. . ++.+|.+.++++++++||.|.-.++- .+..
T Consensus 189 ~~~~~v~~H~af~Y-------f~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~-------~~~~ 254 (291)
T 1pq4_A 189 PQRKFIVFHPSWAY-------FARDYNLVQIPIEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFSTK-------SSEA 254 (291)
T ss_dssp SCCEEEESSCCCHH-------HHHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCCH-------HHHH
T ss_pred CCCEEEEECCchHH-------HHHHCCCEEeecccCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChH-------HHHH
Confidence 46788887776652 34556776554321 1 34455555666668888876555421 2223
Q ss_pred HHHhcCCEEE
Q 012321 321 LCHKKGAIVC 330 (466)
Q Consensus 321 la~~~gillI 330 (466)
++++.|+.++
T Consensus 255 ia~~~g~~v~ 264 (291)
T 1pq4_A 255 IAAEIGAGVE 264 (291)
T ss_dssp HHHHHTCEEE
T ss_pred HHHHcCCeEE
Confidence 4667676654
No 301
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=26.24 E-value=36 Score=32.53 Aligned_cols=71 Identities=25% Similarity=0.316 Sum_probs=40.6
Q ss_pred CEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------C---CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHH
Q 012321 250 GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (466)
Q Consensus 250 D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~------~---D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~e 320 (466)
..+++..+.|+ .+++.+|++...+.. . ++.+|.+.++++++++||.|.-.+| --.+.|.+
T Consensus 164 ~~~vt~H~af~-------Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~----~~~~~l~~ 232 (282)
T 3mfq_A 164 RYLVTPHDAFN-------YFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFTESTTNP----ERMKKLQE 232 (282)
T ss_dssp CEEECSSSCCH-------HHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEECBTTSCT----HHHHHHHH
T ss_pred cEEEEECchHH-------HHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh----HHHHHHHH
Confidence 34555445544 234566776543321 1 3455555666556889988654432 12577888
Q ss_pred HHHhcCCEEEE
Q 012321 321 LCHKKGAIVCI 331 (466)
Q Consensus 321 la~~~gillIv 331 (466)
++++.|+.+++
T Consensus 233 ~a~~~g~~v~~ 243 (282)
T 3mfq_A 233 AVKAKGGQVEV 243 (282)
T ss_dssp HHHTTSCCCEE
T ss_pred HHHhcCCceEE
Confidence 88988876543
No 302
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=25.79 E-value=40 Score=35.09 Aligned_cols=29 Identities=10% Similarity=0.005 Sum_probs=26.1
Q ss_pred CCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 307 NPtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
...|...|++++++.||++|+.||+|-++
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 115 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVVP 115 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 44688999999999999999999999874
No 303
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=25.75 E-value=91 Score=29.69 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=55.3
Q ss_pred EEEEcCCCccchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEE
Q 012321 251 HIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV 329 (466)
Q Consensus 251 ~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gill 329 (466)
+|++.+..|.+....+..+.+..++.+..-|. .|..+++.+..-. ...|++-... ....+++++.+.|+++|..+
T Consensus 90 svltd~~~f~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~G-AD~VlLi~a~---l~~~~l~~l~~~a~~lGl~~ 165 (272)
T 3qja_A 90 SVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHG-ADMLLLIVAA---LEQSVLVSMLDRTESLGMTA 165 (272)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEEEGGG---SCHHHHHHHHHHHHHTTCEE
T ss_pred EEecChhhcCCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcC-CCEEEEeccc---CCHHHHHHHHHHHHHCCCcE
Confidence 34444444555555554443334555544443 3666677666543 6677763222 22345788889999999988
Q ss_pred EEeCCCCCCCccchhccCCcEEEec
Q 012321 330 CIDGTFATPLNQKALSLGADLVLHS 354 (466)
Q Consensus 330 IvD~t~a~~~~~~pl~~gaDivv~S 354 (466)
+++-.-.. -.......|+|++...
T Consensus 166 lvev~t~e-e~~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 166 LVEVHTEQ-EADRALKAGAKVIGVN 189 (272)
T ss_dssp EEEESSHH-HHHHHHHHTCSEEEEE
T ss_pred EEEcCCHH-HHHHHHHCCCCEEEEC
Confidence 88753211 1223445688876544
No 304
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=25.69 E-value=2.6e+02 Score=24.96 Aligned_cols=112 Identities=17% Similarity=0.093 Sum_probs=62.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHh-ccCCCceEEEEeC
Q 012321 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAA-LNNNNVSLFFTES 304 (466)
Q Consensus 226 e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~a-i~~~~tklV~les 304 (466)
...++++.|.-+.. +...|...|. |++.+..-.. +.. +. .++.+...|..|.+.|+++ +.. .++|++.+
T Consensus 10 ~~viI~G~G~~G~~-la~~L~~~g~-v~vid~~~~~----~~~-~~-~~~~~i~gd~~~~~~l~~a~i~~--ad~vi~~~ 79 (234)
T 2aef_A 10 RHVVICGWSESTLE-CLRELRGSEV-FVLAEDENVR----KKV-LR-SGANFVHGDPTRVSDLEKANVRG--ARAVIVDL 79 (234)
T ss_dssp CEEEEESCCHHHHH-HHHHSTTSEE-EEEESCGGGH----HHH-HH-TTCEEEESCTTCHHHHHHTTCTT--CSEEEECC
T ss_pred CEEEEECCChHHHH-HHHHHHhCCe-EEEEECCHHH----HHH-Hh-cCCeEEEcCCCCHHHHHhcCcch--hcEEEEcC
Confidence 45778888775533 3345555565 6655433221 212 22 5778877788899999877 543 67888766
Q ss_pred CCCCCcccccHHHHHHHHHhcC--CEEEEeCCCCCCCccchhccCCcEEEe
Q 012321 305 PTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLH 353 (466)
Q Consensus 305 PsNPtG~v~dl~~I~ela~~~g--illIvD~t~a~~~~~~pl~~gaDivv~ 353 (466)
++. ..-..++..+++.+ +.+++....... .......|+|.++.
T Consensus 80 ~~d-----~~n~~~~~~a~~~~~~~~iia~~~~~~~-~~~l~~~G~~~vi~ 124 (234)
T 2aef_A 80 ESD-----SETIHCILGIRKIDESVRIIAEAERYEN-IEQLRMAGADQVIS 124 (234)
T ss_dssp SCH-----HHHHHHHHHHHHHCSSSEEEEECSSGGG-HHHHHHHTCSEEEC
T ss_pred CCc-----HHHHHHHHHHHHHCCCCeEEEEECCHhH-HHHHHHCCCCEEEC
Confidence 541 11234566777755 356665432111 11122457776553
No 305
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=25.56 E-value=45 Score=28.59 Aligned_cols=45 Identities=11% Similarity=0.158 Sum_probs=32.0
Q ss_pred HHHHhccCCCceEEEEeCCC--CCCcccccHHHHHHHHHhcCCEEEEe
Q 012321 287 GLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPs--NPtG~v~dl~~I~ela~~~gillIvD 332 (466)
++.+.|.+.++.+|+. +|. ++-....|...|.+.|-.++++++..
T Consensus 65 ~I~d~I~~geIdlVIn-t~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 65 QMGARVAEGRILAVIF-FRDPLTAQPHEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp HHHHHHHTTCEEEEEE-ECCTTTCCTTSCCSHHHHHHHHHHTCCEECS
T ss_pred hHHHHHHCCCccEEEE-ccCcccCCCccchHHHHHHHHHHcCCCeEcC
Confidence 5677777666777765 454 43322568999999999999988753
No 306
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=25.56 E-value=2.1e+02 Score=27.18 Aligned_cols=89 Identities=13% Similarity=0.060 Sum_probs=43.5
Q ss_pred HHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEE-eCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccc----c
Q 012321 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV----D 314 (466)
Q Consensus 242 l~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~-vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~----d 314 (466)
+..+...| |-|++++-.+..... +...++.+|++..+ +.+ .+.+.+++..+.. ...||+-+-.-.||.-. +
T Consensus 118 ~~~~~~aGvdGvIipDlp~ee~~~-~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~-~gfiY~vs~~GvTG~~~~~~~~ 195 (271)
T 3nav_A 118 YQRCQKAGVDSVLIADVPTNESQP-FVAAAEKFGIQPIFIAPPTASDETLRAVAQLG-KGYTYLLSRAGVTGAETKANMP 195 (271)
T ss_dssp HHHHHHHTCCEEEETTSCGGGCHH-HHHHHHHTTCEEEEEECTTCCHHHHHHHHHHC-CSCEEECCCC--------CCHH
T ss_pred HHHHHHCCCCEEEECCCCHHHHHH-HHHHHHHcCCeEEEEECCCCCHHHHHHHHHHC-CCeEEEEeccCCCCcccCCchh
Confidence 33334444 777777766654333 33456677877543 333 3456665554432 34566644433466542 3
Q ss_pred HHHHHHHHHhc-CCEEEEe
Q 012321 315 VKLVSDLCHKK-GAIVCID 332 (466)
Q Consensus 315 l~~I~ela~~~-gillIvD 332 (466)
+.++.+.++++ ++++++.
T Consensus 196 ~~~~v~~vr~~~~~Pv~vG 214 (271)
T 3nav_A 196 VHALLERLQQFDAPPALLG 214 (271)
T ss_dssp HHHHHHHHHHTTCCCEEEC
T ss_pred HHHHHHHHHHhcCCCEEEE
Confidence 45555555554 5666663
No 307
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=25.53 E-value=34 Score=35.22 Aligned_cols=28 Identities=7% Similarity=0.080 Sum_probs=25.5
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 308 PtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
-.|...|++++++.||++|+.||+|-++
T Consensus 75 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 75 QYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3688889999999999999999999885
No 308
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=25.36 E-value=2.2e+02 Score=25.31 Aligned_cols=78 Identities=15% Similarity=0.159 Sum_probs=41.0
Q ss_pred cEEEeCCHHHHHH-HHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccC-----CCceEE
Q 012321 227 STVIMASGMSAST-VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN-----NNVSLF 300 (466)
Q Consensus 227 ~~v~~~SG~aAi~-~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~-----~~tklV 300 (466)
..+++++|+..|- .+...|++.|.+|++....-...............+.+...|..|.+.+++.++. .+..+|
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 86 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL 86 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3566666664443 3344567788887765432111111111111113456666788888887776643 125666
Q ss_pred EEeC
Q 012321 301 FTES 304 (466)
Q Consensus 301 ~les 304 (466)
+.+.
T Consensus 87 i~~A 90 (251)
T 1zk4_A 87 VNNA 90 (251)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 309
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=24.89 E-value=63 Score=27.24 Aligned_cols=75 Identities=15% Similarity=0.243 Sum_probs=47.6
Q ss_pred CccchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC---CEEEEeC
Q 012321 258 CYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCIDG 333 (466)
Q Consensus 258 ~y~~t~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~g---illIvD~ 333 (466)
.|.--..++...++..|.++.+... ..++++.+++.+.++.+|.++.-.. .....++++.+..++.| +.+++=.
T Consensus 15 ~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS~~~~--~~~~~~~~~i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 15 CHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYG--QGEIDCKGLRQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSS--THHHHHTTHHHHHHHTTCTTCEEEEEE
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEecCc--CcHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 4443445566678888999886642 4578877776654588888866552 23334666777776653 5666654
Q ss_pred C
Q 012321 334 T 334 (466)
Q Consensus 334 t 334 (466)
.
T Consensus 93 ~ 93 (137)
T 1ccw_A 93 N 93 (137)
T ss_dssp S
T ss_pred C
Confidence 4
No 310
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=24.88 E-value=3.4e+02 Score=26.73 Aligned_cols=81 Identities=14% Similarity=0.121 Sum_probs=44.7
Q ss_pred CCCEEEEcCCCccchHHHHHhhcccCCcE---EEEeCCCCHHHH-HHh------ccCCCceEEEEeCCCCCCc------c
Q 012321 248 AGGHIVTTTDCYRKTRIFIETVLPKMGIT---ATVIDPADMEGL-EAA------LNNNNVSLFFTESPTNPFL------R 311 (466)
Q Consensus 248 pGD~VLv~~~~y~~t~~~~~~~l~~~gi~---v~~vd~~D~e~L-e~a------i~~~~tklV~lesPsNPtG------~ 311 (466)
+|..++..+..+.-.... ++++|++ +.+....+.|++ .+. +.+.++++|++.+.....- .
T Consensus 57 ~g~~vlyId~E~s~~~~r----a~~lGvd~d~llv~~~~~~E~~~l~i~~~l~~i~~~~~~lvVIDSI~aL~~~~eieg~ 132 (333)
T 3io5_A 57 PDAVCLFYDSEFGITPAY----LRSMGVDPERVIHTPVQSLEQLRIDMVNQLDAIERGEKVVVFIDSLGNLASKKETEDA 132 (333)
T ss_dssp TTCEEEEEESSCCCCHHH----HHHTTCCGGGEEEEECSBHHHHHHHHHHHHHTCCTTCCEEEEEECSTTCBCC------
T ss_pred CCceEEEEeccchhhHHH----HHHhCCCHHHeEEEcCCCHHHHHHHHHHHHHHhhccCceEEEEecccccccchhccCc
Confidence 367777766555433222 2333432 333344555554 222 4555689999999886531 1
Q ss_pred c--------cc-------HHHHHHHHHhcCCEEEEe
Q 012321 312 C--------VD-------VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 312 v--------~d-------l~~I~ela~~~gillIvD 332 (466)
. .. +.+|..+++++|+.+++=
T Consensus 133 ~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~t 168 (333)
T 3io5_A 133 LNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIAI 168 (333)
T ss_dssp --------CTHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 1 11 344666789999876653
No 311
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=24.60 E-value=37 Score=34.29 Aligned_cols=28 Identities=18% Similarity=0.199 Sum_probs=25.4
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 308 PtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
-.|...|++++++.||++|+.||+|-++
T Consensus 65 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 65 EYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3688889999999999999999999885
No 312
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=24.52 E-value=34 Score=37.28 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=26.5
Q ss_pred CCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 305 PsNPtG~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
|..|++...+++++++.||++|+-||+|-++.
T Consensus 247 ~~~~~~~~~efk~lV~~~H~~Gi~VilDvV~N 278 (714)
T 2ya0_A 247 PKNPEKRIAEFKNLINEIHKRGMGAILDVVYN 278 (714)
T ss_dssp TTSTTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCccchHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 44555557889999999999999999998864
No 313
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=24.46 E-value=2.5e+02 Score=27.01 Aligned_cols=81 Identities=11% Similarity=0.083 Sum_probs=44.7
Q ss_pred HHHHhccCCCEEEEcC-CCccchHHHHHhhcccCCcEEEEeC-CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHH
Q 012321 241 MLLALVPAGGHIVTTT-DCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (466)
Q Consensus 241 al~all~pGD~VLv~~-~~y~~t~~~~~~~l~~~gi~v~~vd-~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I 318 (466)
++..++..|.+|++.. ..-... ...+....++++...| ..|.+.++++++. ...|+................+
T Consensus 21 l~~~L~~~g~~V~~~~R~~~~~~---~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~--~d~Vi~~a~~~~~~~~~~~~~l 95 (352)
T 1xgk_A 21 LIRVAAAVGHHVRAQVHSLKGLI---AEELQAIPNVTLFQGPLLNNVPLMDTLFEG--AHLAFINTTSQAGDEIAIGKDL 95 (352)
T ss_dssp HHHHHHHTTCCEEEEESCSCSHH---HHHHHTSTTEEEEESCCTTCHHHHHHHHTT--CSEEEECCCSTTSCHHHHHHHH
T ss_pred HHHHHHhCCCEEEEEECCCChhh---HHHHhhcCCcEEEECCccCCHHHHHHHHhc--CCEEEEcCCCCCcHHHHHHHHH
Confidence 3345566777766532 221111 1111112367777778 8899999998864 5667654432211111224678
Q ss_pred HHHHHhcC
Q 012321 319 SDLCHKKG 326 (466)
Q Consensus 319 ~ela~~~g 326 (466)
.+.|++.|
T Consensus 96 ~~aa~~~g 103 (352)
T 1xgk_A 96 ADAAKRAG 103 (352)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHcC
Confidence 88888877
No 314
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=24.44 E-value=1.2e+02 Score=30.11 Aligned_cols=77 Identities=13% Similarity=0.088 Sum_probs=54.7
Q ss_pred CEEEEcCCCccchHHHHHhhcccC-CcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCE
Q 012321 250 GHIVTTTDCYRKTRIFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAI 328 (466)
Q Consensus 250 D~VLv~~~~y~~t~~~~~~~l~~~-gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~~gil 328 (466)
+-..+.+|........+..+.+.. ++.+...+..+++++++.++.....+|.+. |-+.+..+|+++|+++|+.
T Consensus 219 ~i~~iEqP~~~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik------GGit~a~~i~~~A~~~gi~ 292 (389)
T 2oz8_A 219 DLLWVEDPILRHDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH------GQVTDVMRIGWLAAELGIP 292 (389)
T ss_dssp CCSEEESCBCTTCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC------SCHHHHHHHHHHHHHHTCC
T ss_pred CceEEeCCCCCcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC------cCHHHHHHHHHHHHHcCCe
Confidence 334667776544444444444445 677655443388999998876557788874 8889999999999999998
Q ss_pred EEEe
Q 012321 329 VCID 332 (466)
Q Consensus 329 lIvD 332 (466)
+++=
T Consensus 293 ~~~~ 296 (389)
T 2oz8_A 293 ISIG 296 (389)
T ss_dssp EEEC
T ss_pred Eeec
Confidence 8877
No 315
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=24.09 E-value=2.8e+02 Score=24.58 Aligned_cols=91 Identities=9% Similarity=-0.039 Sum_probs=50.1
Q ss_pred EEEeCCHHHHH-HHHHHHhccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCC
Q 012321 228 TVIMASGMSAS-TVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 228 ~v~~~SG~aAi-~~al~all~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesP 305 (466)
.+++++|+..| ..++..|+..| -+|++..-.-.. . ..+...++.+...|..|.++++++++. ..+|+.+..
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~----~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vv~~a~ 97 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK----I-HKPYPTNSQIIMGDVLNHAALKQAMQG--QDIVYANLT 97 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGG----S-CSSCCTTEEEEECCTTCHHHHHHHHTT--CSEEEEECC
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhh----h-cccccCCcEEEEecCCCHHHHHHHhcC--CCEEEEcCC
Confidence 44554444223 23445677788 466553221111 0 011223677777788899999999975 566665333
Q ss_pred CCCCcccccHHHHHHHHHhcCC
Q 012321 306 TNPFLRCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 306 sNPtG~v~dl~~I~ela~~~gi 327 (466)
. .......+.+.+.+++.++
T Consensus 98 ~--~~~~~~~~~~~~~~~~~~~ 117 (236)
T 3qvo_A 98 G--EDLDIQANSVIAAMKACDV 117 (236)
T ss_dssp S--TTHHHHHHHHHHHHHHTTC
T ss_pred C--CchhHHHHHHHHHHHHcCC
Confidence 2 1112235678888887764
No 316
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=24.07 E-value=2.2e+02 Score=24.76 Aligned_cols=79 Identities=13% Similarity=0.033 Sum_probs=46.8
Q ss_pred HHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCC-HHHHHHhccCCCceEEEEeCCCCCCc----cccc
Q 012321 240 VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD-MEGLEAALNNNNVSLFFTESPTNPFL----RCVD 314 (466)
Q Consensus 240 ~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D-~e~Le~ai~~~~tklV~lesPsNPtG----~v~d 314 (466)
.++..|++.|.+|++..-.-.. .....++++...|..| .+.+++++++ ..+|+.+....... .+.-
T Consensus 15 ~l~~~L~~~g~~V~~~~R~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~~~--~d~vi~~ag~~~~~~~~~n~~~ 85 (219)
T 3dqp_A 15 SLLKSLSTTDYQIYAGARKVEQ-------VPQYNNVKAVHFDVDWTPEEMAKQLHG--MDAIINVSGSGGKSLLKVDLYG 85 (219)
T ss_dssp HHHHHHTTSSCEEEEEESSGGG-------SCCCTTEEEEECCTTSCHHHHHTTTTT--CSEEEECCCCTTSSCCCCCCHH
T ss_pred HHHHHHHHCCCEEEEEECCccc-------hhhcCCceEEEecccCCHHHHHHHHcC--CCEEEECCcCCCCCcEeEeHHH
Confidence 3445677888877765332111 1111467777788889 9999999874 66776544332211 1111
Q ss_pred HHHHHHHHHhcCC
Q 012321 315 VKLVSDLCHKKGA 327 (466)
Q Consensus 315 l~~I~ela~~~gi 327 (466)
...+.+.|++.++
T Consensus 86 ~~~l~~a~~~~~~ 98 (219)
T 3dqp_A 86 AVKLMQAAEKAEV 98 (219)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCC
Confidence 4578888887764
No 317
>1lu0_A CMTI-I, trypsin inhibitor I; serine protease inhibitor, metal coordination, hydrolase INH; 1.03A {Cucurbita maxima} SCOP: g.3.2.1 PDB: 2v1v_A 1cti_A 1ppe_I 2cti_A 2sta_I 3cti_A 2btc_I 2stb_I 2eti_A 2it7_A
Probab=24.07 E-value=17 Score=22.78 Aligned_cols=15 Identities=40% Similarity=0.855 Sum_probs=12.5
Q ss_pred cccccccccCCCCcccccCCCCC
Q 012321 7 SSQKILSFSSSCSSFECRSDPDF 29 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (466)
.|||++ .+|..|.|-
T Consensus 2 ~CPrIl--------m~CK~DsDC 16 (29)
T 1lu0_A 2 VCPRIL--------LECKKDSDC 16 (29)
T ss_dssp CCCSCC--------CBCSSGGGS
T ss_pred CCchhh--------hhccccccc
Confidence 389999 899998874
No 318
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=23.96 E-value=2.2e+02 Score=25.11 Aligned_cols=125 Identities=14% Similarity=0.205 Sum_probs=62.9
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE--EEEeCCCCH
Q 012321 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADM 285 (466)
Q Consensus 208 ~~p~~~~Lee~lA~l~g~e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~--v~~vd~~D~ 285 (466)
..|....+-..+....+...++=+++|+......+...+.++.+|+..+..-. ........++..|+. +.++. .|.
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~-~d~ 119 (221)
T 3u81_A 42 VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPD-CAAITQQMLNFAGLQDKVTILN-GAS 119 (221)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH-HHHHHHHHHHHHTCGGGEEEEE-SCH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChH-HHHHHHHHHHHcCCCCceEEEE-CCH
Confidence 34556666566666666677777777775554444444556777777665322 223333333333321 33332 234
Q ss_pred HHHHHhccC----CCceEEEEeCCCCCCcccccHHHHHHHHH--hcCCEEEEeCCCCC
Q 012321 286 EGLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCH--KKGAIVCIDGTFAT 337 (466)
Q Consensus 286 e~Le~ai~~----~~tklV~lesPsNPtG~v~dl~~I~ela~--~~gillIvD~t~a~ 337 (466)
.++...+.. ....+|++.... ....+..++.+.++ +.|.++++|+....
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~---~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~ 174 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWK---DRYLPDTLLLEKCGLLRKGTVLLADNVIVP 174 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCG---GGHHHHHHHHHHTTCCCTTCEEEESCCCCC
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCc---ccchHHHHHHHhccccCCCeEEEEeCCCCc
Confidence 333333321 236789885432 12222223333222 24778888887543
No 319
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=23.87 E-value=2.4e+02 Score=25.26 Aligned_cols=42 Identities=17% Similarity=0.194 Sum_probs=26.9
Q ss_pred CcccccHHHHHHHHHh--cCCEEEEeCCCCCCCccchhccCCcEEEec
Q 012321 309 FLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHS 354 (466)
Q Consensus 309 tG~v~dl~~I~ela~~--~gillIvD~t~a~~~~~~pl~~gaDivv~S 354 (466)
.|...++-++++.+++ .|+.+|.= +.....++..-+|+++..
T Consensus 116 SG~t~~~i~~~~~ak~~~~Ga~vI~I----T~~~~s~La~~aD~~l~~ 159 (220)
T 3etn_A 116 SGKTREIVELTQLAHNLNPGLKFIVI----TGNPDSPLASESDVCLST 159 (220)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCEEEEE----ESCTTSHHHHHSSEEEEC
T ss_pred CCCCHHHHHHHHHHHhcCCCCeEEEE----ECCCCChhHHhCCEEEEc
Confidence 3777788899999999 99765431 112234454457777754
No 320
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=23.68 E-value=5.2e+02 Score=25.20 Aligned_cols=109 Identities=6% Similarity=0.043 Sum_probs=54.0
Q ss_pred HHHhhhCCCcEEEeCCHHHHH-HHHHHHhccCC-CEEEEcCCCccchHHHHHhhcc-----cCCcEEEEeCCCCHHHHHH
Q 012321 218 KMSALEGAESTVIMASGMSAS-TVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLP-----KMGITATVIDPADMEGLEA 290 (466)
Q Consensus 218 ~lA~l~g~e~~v~~~SG~aAi-~~al~all~pG-D~VLv~~~~y~~t~~~~~~~l~-----~~gi~v~~vd~~D~e~Le~ 290 (466)
.+........++++ +|+..| ..++..|++.| .+|++.+..-.........+.. ..++.+...|..|.+.++.
T Consensus 28 ~~~~~~~~k~vLVT-GatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~ 106 (399)
T 3nzo_A 28 ELQSVVSQSRFLVL-GGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAF 106 (399)
T ss_dssp HHHHHHHTCEEEEE-TTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHH
T ss_pred HHHHHhCCCEEEEE-cCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHH
Confidence 34443333444444 433222 23445667778 5777655432222222222111 1345555567778887777
Q ss_pred hccCCCceEEEEeCCCCCCccccc--------------HHHHHHHHHhcCC
Q 012321 291 ALNNNNVSLFFTESPTNPFLRCVD--------------VKLVSDLCHKKGA 327 (466)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~v~d--------------l~~I~ela~~~gi 327 (466)
.+...++..|+-...........+ ...+.+.|+++|+
T Consensus 107 ~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv 157 (399)
T 3nzo_A 107 IKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGA 157 (399)
T ss_dssp HHHCCCCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred HHHhCCCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 765434677775433211111112 2367888888875
No 321
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=23.47 E-value=42 Score=33.58 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=25.6
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 308 PtG~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
..|...|++++++.||++|+.||+|-++.
T Consensus 64 ~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 92 (405)
T 1ht6_A 64 KYGNAAELKSLIGALHGKGVQAIADIVIN 92 (405)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 35888899999999999999999998853
No 322
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=23.32 E-value=1.3e+02 Score=29.04 Aligned_cols=67 Identities=18% Similarity=0.279 Sum_probs=39.3
Q ss_pred CCEEEEcCCCccchHHHHHhhcccCCcEEEEeCC------C---CHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHH
Q 012321 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (466)
Q Consensus 249 GD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~------~---D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ 319 (466)
+..+++..+.|+ .+++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+.
T Consensus 190 ~~~~v~~H~af~-------Yfa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~~~v~~If~e~~~~~-------k~~~ 255 (307)
T 3ujp_A 190 QRFLVSCEGAFS-------YLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQK 255 (307)
T ss_dssp GCEEEEEESTTH-------HHHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHH
T ss_pred CCEEEEECchHH-------HHHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHhcCCcEEEEeCCCCh-------HHHH
Confidence 456666555554 234567777654321 1 3556666666667888888765544 3445
Q ss_pred HHHHhcCCEE
Q 012321 320 DLCHKKGAIV 329 (466)
Q Consensus 320 ela~~~gill 329 (466)
.++++.|+.+
T Consensus 256 ~ia~e~g~~v 265 (307)
T 3ujp_A 256 QVAQATGARF 265 (307)
T ss_dssp HTTTTTCCEE
T ss_pred HHHHHhCCce
Confidence 5567777665
No 323
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=23.30 E-value=42 Score=34.36 Aligned_cols=27 Identities=22% Similarity=0.308 Sum_probs=24.9
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 309 FLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 309 tG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
.|...|++++++.||++|+.||+|-++
T Consensus 78 ~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 78 YGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 588889999999999999999999885
No 324
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=23.10 E-value=41 Score=34.31 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=26.7
Q ss_pred CCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 306 sNPtG~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
+...|...|++++++.||++|+-||+|-++.
T Consensus 91 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (478)
T 2guy_A 91 NENYGTADDLKALSSALHERGMYLMVDVVAN 121 (478)
T ss_dssp CTTSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 3346888999999999999999999998853
No 325
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=22.85 E-value=27 Score=38.07 Aligned_cols=27 Identities=26% Similarity=0.374 Sum_probs=23.8
Q ss_pred cccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 310 LRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 310 G~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
|+..|++++++.||++|+-||+|-++.
T Consensus 313 ~~~~dfk~LV~~aH~~GI~VIlDvV~N 339 (718)
T 2e8y_A 313 TRKTELKQMINTLHQHGLRVILDVVFN 339 (718)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 457899999999999999999998853
No 326
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=22.84 E-value=1.4e+02 Score=26.60 Aligned_cols=77 Identities=10% Similarity=0.169 Sum_probs=40.5
Q ss_pred EEEeCCHHHHHH-HHHHHhccCCCEEEEcCCCccchHHHHHhhcccCC--cEEEEeCCCCHHHHHHhccCC-----CceE
Q 012321 228 TVIMASGMSAST-VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVIDPADMEGLEAALNNN-----NVSL 299 (466)
Q Consensus 228 ~v~~~SG~aAi~-~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~g--i~v~~vd~~D~e~Le~ai~~~-----~tkl 299 (466)
.+++++|+..|- .+...+++.|.+|++..............+....+ +.+...|..|.+++++.+++- +..+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDV 83 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence 445555554442 33456678898887754433222222222221223 344446788999988887631 3566
Q ss_pred EEEeC
Q 012321 300 FFTES 304 (466)
Q Consensus 300 V~les 304 (466)
++.+.
T Consensus 84 li~~A 88 (235)
T 3l77_A 84 VVANA 88 (235)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66533
No 327
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=22.58 E-value=1.6e+02 Score=26.68 Aligned_cols=83 Identities=12% Similarity=0.061 Sum_probs=55.0
Q ss_pred CEEEEcC---CCccchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEE--eCCCCCCcccccHHHHHHHHH
Q 012321 250 GHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFT--ESPTNPFLRCVDVKLVSDLCH 323 (466)
Q Consensus 250 D~VLv~~---~~y~~t~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~l--esPsNPtG~v~dl~~I~ela~ 323 (466)
.+|++.. ..|.--..++...++..|.++.+... ..++++.+++.+.++.+|.+ ..-. +.....++++.+.++
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~--~~~~~~~~~~i~~l~ 170 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALM--TTSMLGQKDLMDRLN 170 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSS--HHHHTHHHHHHHHHH
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcc--cCcHHHHHHHHHHHH
Confidence 4666553 33444445566678889999987753 36788877666656888888 6554 334456888888888
Q ss_pred hcC----CEEEEeCC
Q 012321 324 KKG----AIVCIDGT 334 (466)
Q Consensus 324 ~~g----illIvD~t 334 (466)
+.| +.+++=..
T Consensus 171 ~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 171 EEKLRDSVKCMFGGA 185 (215)
T ss_dssp HTTCGGGSEEEEESS
T ss_pred HcCCCCCCEEEEECC
Confidence 865 46666544
No 328
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=22.58 E-value=45 Score=33.70 Aligned_cols=31 Identities=23% Similarity=0.068 Sum_probs=26.7
Q ss_pred CCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 306 sNPtG~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
....|...|++++++.||++|+-||+|-++.
T Consensus 75 dp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~N 105 (424)
T 2dh2_A 75 DPNFGSKEDFDSLLQSAKKKSIRVILDLTPN 105 (424)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3336888999999999999999999998853
No 329
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=22.58 E-value=36 Score=34.86 Aligned_cols=32 Identities=9% Similarity=0.103 Sum_probs=27.3
Q ss_pred CCCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 304 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 304 sPsNPtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
.+....|...|++++++.||++|+.||+|-++
T Consensus 66 ~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 66 IINTRSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp CSEETTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 34444688889999999999999999999885
No 330
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=22.21 E-value=4.4e+02 Score=23.89 Aligned_cols=77 Identities=12% Similarity=0.151 Sum_probs=38.4
Q ss_pred cEEEeCCHHHHHH-HHHHHhccCCCEEEEcCCCccchHHHHHhhcccCC----cEEEEeCCCCHHHHHHhccC-----CC
Q 012321 227 STVIMASGMSAST-VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG----ITATVIDPADMEGLEAALNN-----NN 296 (466)
Q Consensus 227 ~~v~~~SG~aAi~-~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~g----i~v~~vd~~D~e~Le~ai~~-----~~ 296 (466)
..+++++|+..|- .+...|++.|-+|++....-....... ..++..+ +.+...|..|.++++++++. .+
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 111 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG 111 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH-HHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 3555555554442 334456678888876543211111111 1122222 34445677888887776642 12
Q ss_pred ceEEEEeC
Q 012321 297 VSLFFTES 304 (466)
Q Consensus 297 tklV~les 304 (466)
..+|+-+.
T Consensus 112 iD~vi~~A 119 (279)
T 1xg5_A 112 VDICINNA 119 (279)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 56666533
No 331
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=22.10 E-value=3e+02 Score=26.90 Aligned_cols=89 Identities=7% Similarity=0.018 Sum_probs=60.7
Q ss_pred ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh
Q 012321 246 VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (466)
Q Consensus 246 l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd-~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~ 324 (466)
+.+-+-..+.+|........+..+.+..++.+-.-+ ..+.+++++.++.....+|.+. ++ ..|-+....+|+++|++
T Consensus 211 l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k-~~-~~GGit~~~~i~~~A~~ 288 (370)
T 1chr_A 211 LEALGVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLK-LC-NMGGVSATQKIAAVAEA 288 (370)
T ss_dssp HHTTTEEEEECCSCTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEEC-TT-TSCSHHHHHHHHHHHHH
T ss_pred HHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEEC-cc-ccCCHHHHHHHHHHHHH
Confidence 344455677888766544445454455567665433 3478888888876446777763 33 47888899999999999
Q ss_pred cCCEEEEeCCCC
Q 012321 325 KGAIVCIDGTFA 336 (466)
Q Consensus 325 ~gillIvD~t~a 336 (466)
+|+.+++=..+.
T Consensus 289 ~g~~~~~~~~~e 300 (370)
T 1chr_A 289 SGIASYGGTMLD 300 (370)
T ss_dssp HTCEEEECCSCC
T ss_pred cCCeEEecCCCc
Confidence 999988765443
No 332
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=22.10 E-value=1.9e+02 Score=27.11 Aligned_cols=105 Identities=17% Similarity=0.181 Sum_probs=53.9
Q ss_pred hccCC-CEEEEcCCCccchHHHHHhhcccCCcEEEE--eCCCCHHHHHHhccCCCceEEEEeCCCCCC--ccc---ccH-
Q 012321 245 LVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRC---VDV- 315 (466)
Q Consensus 245 ll~pG-D~VLv~~~~y~~t~~~~~~~l~~~gi~v~~--vd~~D~e~Le~ai~~~~tklV~lesPsNPt--G~v---~dl- 315 (466)
+.+.| |-|.+....-....+.++ ..+..|+++-. -+....+.++..+.. +.+|++-+. ||. |.- ..+
T Consensus 105 ~~~aGAd~itvH~Ea~~~~~~~i~-~ir~~G~k~Gvalnp~Tp~e~l~~~l~~--vD~VlvMsV-~PGfgGQ~fi~~~l~ 180 (246)
T 3inp_A 105 FAKAGATSIVFHPEASEHIDRSLQ-LIKSFGIQAGLALNPATGIDCLKYVESN--IDRVLIMSV-NPGFGGQKFIPAMLD 180 (246)
T ss_dssp HHHHTCSEEEECGGGCSCHHHHHH-HHHTTTSEEEEEECTTCCSGGGTTTGGG--CSEEEEECS-CTTC--CCCCTTHHH
T ss_pred HHHcCCCEEEEccccchhHHHHHH-HHHHcCCeEEEEecCCCCHHHHHHHHhc--CCEEEEeee-cCCCCCcccchHHHH
Confidence 34445 555543221112233333 34556665432 234456777666653 567766543 342 331 124
Q ss_pred --HHHHHHHHhc--CCEEEEeCCCCCCCccchhccCCcEEEe
Q 012321 316 --KLVSDLCHKK--GAIVCIDGTFATPLNQKALSLGADLVLH 353 (466)
Q Consensus 316 --~~I~ela~~~--gillIvD~t~a~~~~~~pl~~gaDivv~ 353 (466)
+++.+++.++ ++.+.+|.-....-.....+.|+|+++-
T Consensus 181 KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~ 222 (246)
T 3inp_A 181 KAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVA 222 (246)
T ss_dssp HHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEE
Confidence 4455555443 5889999765433334455679997763
No 333
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=21.75 E-value=1.6e+02 Score=24.29 Aligned_cols=54 Identities=11% Similarity=0.143 Sum_probs=32.1
Q ss_pred CCcEEEEeCCCCHHHHHHhccCC----------CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEE
Q 012321 273 MGITATVIDPADMEGLEAALNNN----------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 273 ~gi~v~~vd~~D~e~Le~ai~~~----------~tklV~lesPsNPtG~v~dl~~I~ela~~~gillI 330 (466)
+++.+..+...|+++|.+.++++ .+-+|-++.-. ...|+.+|.++++++|+.+|
T Consensus 15 ~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 15 FTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred eeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 34555555556777666655421 12233332221 23689999999999998764
No 334
>1mct_I Trypsin inhibitor A; complex(proteinase/inhibitor); 1.60A {Momordica charantia} SCOP: g.3.2.1 PDB: 1f2s_I
Probab=21.62 E-value=19 Score=22.44 Aligned_cols=15 Identities=33% Similarity=0.654 Sum_probs=12.4
Q ss_pred cccccccccCCCCcccccCCCCC
Q 012321 7 SSQKILSFSSSCSSFECRSDPDF 29 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (466)
.|||++ .+|..|.|-
T Consensus 2 ~CPrIl--------m~Ck~DsDC 16 (28)
T 1mct_I 2 ICPRIW--------MECTRDSDC 16 (28)
T ss_dssp CEECCC--------CBCSSGGGS
T ss_pred CCchhh--------hhccccccc
Confidence 389999 899998874
No 335
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=21.50 E-value=46 Score=33.62 Aligned_cols=27 Identities=26% Similarity=0.392 Sum_probs=23.9
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 309 FLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 309 tG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
.|...|++++++.||++|+.||+|-++
T Consensus 80 ~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 80 YGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 466678999999999999999999874
No 336
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=21.31 E-value=86 Score=28.20 Aligned_cols=45 Identities=18% Similarity=0.188 Sum_probs=31.9
Q ss_pred HHHHhccCCCceEEEEeCCC--CCCcccccHHHHHHHHHhcCCEEEEe
Q 012321 287 GLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPs--NPtG~v~dl~~I~ela~~~gillIvD 332 (466)
++.+.|.+.++.+|+. +|. ++-....|...|.+.|-.++++++.-
T Consensus 89 qI~d~I~~geIdlVIn-t~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tn 135 (178)
T 1vmd_A 89 QIGAMIAEGKIDVLIF-FWDPLEPQAHDVDVKALIRIATVYNIPVAIT 135 (178)
T ss_dssp HHHHHHHTTSCCEEEE-ECCSSSCCTTSCCHHHHHHHHHHTTCCEESS
T ss_pred hHHHHHHCCCccEEEE-ccCccCCCcccccHHHHHHHHHHcCCCEEeC
Confidence 5667776666777765 454 43222568999999999999988743
No 337
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=21.02 E-value=1.2e+02 Score=30.44 Aligned_cols=88 Identities=18% Similarity=0.169 Sum_probs=51.4
Q ss_pred cCCcEEEEeCC--CCHHHHHHhcc----CCCceEEEEeC-CC-CCC--cccccHHHHHHHHHhcCCEEEEeCCCCCC---
Q 012321 272 KMGITATVIDP--ADMEGLEAALN----NNNVSLFFTES-PT-NPF--LRCVDVKLVSDLCHKKGAIVCIDGTFATP--- 338 (466)
Q Consensus 272 ~~gi~v~~vd~--~D~e~Le~ai~----~~~tklV~les-Ps-NPt--G~v~dl~~I~ela~~~gillIvD~t~a~~--- 338 (466)
..|..+..-.. .++++++.+++ ..+..+++++. .+ .|+ -...|+..|..+.+..++++++|-+++.+
T Consensus 247 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~ 326 (385)
T 3nvt_A 247 RVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTGRKD 326 (385)
T ss_dssp TSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHCCGG
T ss_pred ccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCCccc
Confidence 44555544332 35565555442 22356777765 32 343 24468888888877789999999997754
Q ss_pred ----CccchhccCCc-EEEe---cccccc
Q 012321 339 ----LNQKALSLGAD-LVLH---SATKFI 359 (466)
Q Consensus 339 ----~~~~pl~~gaD-ivv~---S~sK~l 359 (466)
+..-....|+| +++. ...|.+
T Consensus 327 ~v~~~a~AAvA~GA~gl~iE~H~~pd~a~ 355 (385)
T 3nvt_A 327 LLLPCAKAALAIEADGVMAEVHPDPAVAL 355 (385)
T ss_dssp GHHHHHHHHHHTTCSEEEEEBCSCGGGCS
T ss_pred hHHHHHHHHHHhCCCEEEEEecCChhhcC
Confidence 12234567888 3332 344555
No 338
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=21.01 E-value=46 Score=33.86 Aligned_cols=28 Identities=21% Similarity=0.373 Sum_probs=25.3
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 308 PtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
..|...|++++++.||++|+.||+|-++
T Consensus 92 ~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 119 (475)
T 2z1k_A 92 ILGGNEALRHLLEVAHAHGVRVILDGVF 119 (475)
T ss_dssp GGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3588899999999999999999999875
No 339
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=20.83 E-value=1.8e+02 Score=26.84 Aligned_cols=77 Identities=12% Similarity=0.163 Sum_probs=40.4
Q ss_pred CcEEEeCCHHHHHHH-HHHHhccCCCEEEEcCCCccchHHHHHhhcccCC--cEEEEeCCCCHHHHHHhccC-----CCc
Q 012321 226 ESTVIMASGMSASTV-MLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVIDPADMEGLEAALNN-----NNV 297 (466)
Q Consensus 226 e~~v~~~SG~aAi~~-al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~g--i~v~~vd~~D~e~Le~ai~~-----~~t 297 (466)
...+++++|+..|-. +...|++.|-+|++....-......+...++..+ +.....|..|.+++++.+++ .+.
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i 107 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRL 107 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 346666666654433 3456778898887743322221222222233333 34444677788877776642 125
Q ss_pred eEEEE
Q 012321 298 SLFFT 302 (466)
Q Consensus 298 klV~l 302 (466)
.+++-
T Consensus 108 d~lv~ 112 (269)
T 4dmm_A 108 DVLVN 112 (269)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 66654
No 340
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=20.77 E-value=46 Score=34.01 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=26.7
Q ss_pred CCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 305 PsNPtG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
++.-.|...|++++++.||++|+.||+|-++
T Consensus 90 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (484)
T 2aaa_A 90 VNSNFGTADNLKSLSDALHARGMYLMVDVVP 120 (484)
T ss_dssp ECTTTCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3444688899999999999999999999885
No 341
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=20.70 E-value=1.9e+02 Score=30.54 Aligned_cols=110 Identities=18% Similarity=0.126 Sum_probs=64.2
Q ss_pred HHhccCCCEEEEcCCCccchHHHHHh---hcccC-CcEEEEeCCCCHHHHHHhccCCCceEEEEe-CCC------CCCcc
Q 012321 243 LALVPAGGHIVTTTDCYRKTRIFIET---VLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPT------NPFLR 311 (466)
Q Consensus 243 ~all~pGD~VLv~~~~y~~t~~~~~~---~l~~~-gi~v~~vd~~D~e~Le~ai~~~~tklV~le-sPs------NPtG~ 311 (466)
.+|+..|-.+|+.+..|+.....++. +-+.+ .+.+.--+..+.+..+.+++.. ...|-+- -|. -.+|.
T Consensus 287 ~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aG-AD~vkVGiGpGSiCtTr~v~Gv 365 (556)
T 4af0_A 287 KLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAG-ADGLRIGMGSGSICITQEVMAV 365 (556)
T ss_dssp HHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHT-CSEEEECSSCSTTBCCTTTCCS
T ss_pred HHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcC-CCEEeecCCCCcccccccccCC
Confidence 45677886667777777764444322 22222 4555444555777777776543 4555541 122 12333
Q ss_pred ccc----HHHHHHHHHhcCCEEEEeCCCCC-CCccchhccCCcEEEe
Q 012321 312 CVD----VKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLH 353 (466)
Q Consensus 312 v~d----l~~I~ela~~~gillIvD~t~a~-~~~~~pl~~gaDivv~ 353 (466)
=.+ +.+.++.++++|+++|.|.-.-. +-..+.+..|+|.|+-
T Consensus 366 G~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMl 412 (556)
T 4af0_A 366 GRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMM 412 (556)
T ss_dssp CCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEE
Confidence 223 45667778889999999986332 3345677788887763
No 342
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=20.67 E-value=2.9e+02 Score=28.03 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=55.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCC
Q 012321 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 226 e~~v~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesP 305 (466)
..+++++.|..|...+ ..|++.|-+|.+.++..... +.......++++..-+ .+.++ ++. ..+|+. +|
T Consensus 13 ~~vlVvGgG~va~~k~-~~L~~~ga~V~vi~~~~~~~---~~~l~~~~~i~~~~~~-~~~~~----l~~--~~lVi~-at 80 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKA-RLLLEAGARLTVNALTFIPQ---FTVWANEGMLTLVEGP-FDETL----LDS--CWLAIA-AT 80 (457)
T ss_dssp CEEEEECCSHHHHHHH-HHHHHTTBEEEEEESSCCHH---HHHHHTTTSCEEEESS-CCGGG----GTT--CSEEEE-CC
T ss_pred CEEEEECCCHHHHHHH-HHHHhCcCEEEEEcCCCCHH---HHHHHhcCCEEEEECC-CCccc----cCC--ccEEEE-cC
Confidence 4688889988776554 56778888877766654332 2232333456554322 22222 222 457766 55
Q ss_pred CCCCcccccHHHHHHHHHhcCCEE-EEeCC
Q 012321 306 TNPFLRCVDVKLVSDLCHKKGAIV-CIDGT 334 (466)
Q Consensus 306 sNPtG~v~dl~~I~ela~~~gill-IvD~t 334 (466)
.++. .-..+.+.|+++|+++ ++|+.
T Consensus 81 ~~~~----~n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 81 DDDT----VNQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp SCHH----HHHHHHHHHHHTTCEEEETTCT
T ss_pred CCHH----HHHHHHHHHHHcCCEEEECCCc
Confidence 5431 1367899999999986 56765
No 343
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=20.62 E-value=70 Score=27.98 Aligned_cols=45 Identities=16% Similarity=0.105 Sum_probs=31.7
Q ss_pred HHHHhccCCCceEEEEeCCC--CCCcccccHHHHHHHHHhcCCEEEEe
Q 012321 287 GLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesPs--NPtG~v~dl~~I~ela~~~gillIvD 332 (466)
++.+.|.+.++.+|+. +|. ++-....|...|.+.|-.++++++.-
T Consensus 73 ~I~d~I~~geIdlVIn-t~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 119 (152)
T 1b93_A 73 QVGALISEGKIDVLIF-FWDPLNAVPHDPDVKALLRLATVWNIPVATN 119 (152)
T ss_dssp HHHHHHHTTCCCEEEE-ECCTTSCCTTHHHHHHHHHHHHHTTCCEESS
T ss_pred hHHHHHHCCCccEEEE-cCCcccCCcccccHHHHHHHHHHcCCCEEeC
Confidence 5777777666877765 454 32222458899999999999998754
No 344
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=20.60 E-value=2.2e+02 Score=27.68 Aligned_cols=88 Identities=11% Similarity=0.149 Sum_probs=57.8
Q ss_pred ccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeC-CCCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh
Q 012321 246 VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (466)
Q Consensus 246 l~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd-~~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~ 324 (466)
+.+-+-..+.+|........+..+.+..++.+...+ ..+++++++.++.....+|.+ -| +..|-+....+++++|++
T Consensus 205 l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i-k~-~~~GGit~~~~i~~~A~~ 282 (368)
T 1sjd_A 205 LDPFGLLLIEQPLEEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNI-KP-GRVGGYLEARRVHDVCAA 282 (368)
T ss_dssp TGGGCCSEEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE-CT-TTTTSHHHHHHHHHHHHH
T ss_pred HHhcCCCeEeCCCChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEe-cc-cccCCHHHHHHHHHHHHH
Confidence 333333466777654444444444445566665433 347888998887655677776 33 357888899999999999
Q ss_pred cCCEEEEeCCC
Q 012321 325 KGAIVCIDGTF 335 (466)
Q Consensus 325 ~gillIvD~t~ 335 (466)
+|+.+++=..+
T Consensus 283 ~g~~~~~~~~~ 293 (368)
T 1sjd_A 283 HGIPVWCGGMI 293 (368)
T ss_dssp TTCCEEECCCC
T ss_pred cCCcEEeCCcc
Confidence 99987665544
No 345
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=20.48 E-value=1.4e+02 Score=28.00 Aligned_cols=76 Identities=13% Similarity=0.149 Sum_probs=40.4
Q ss_pred cEEEeCCHHHHHH-HHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcE--EEEeCCCCHHHHHHhccC-----CCce
Q 012321 227 STVIMASGMSAST-VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADMEGLEAALNN-----NNVS 298 (466)
Q Consensus 227 ~~v~~~SG~aAi~-~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~--v~~vd~~D~e~Le~ai~~-----~~tk 298 (466)
..+++|+|+..|- .+...|++.|.+|++....-..........++..+.+ +...|..|.+++++.+++ .+..
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 127 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLN 127 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3555666654443 3345667889888775433222222232333444444 444577788877776642 1256
Q ss_pred EEEE
Q 012321 299 LFFT 302 (466)
Q Consensus 299 lV~l 302 (466)
+++-
T Consensus 128 ~lvn 131 (291)
T 3ijr_A 128 ILVN 131 (291)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 346
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=20.39 E-value=1e+02 Score=28.90 Aligned_cols=84 Identities=15% Similarity=0.168 Sum_probs=53.0
Q ss_pred CCEEEEcC---CCccchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCcccccHHHHHHHHHh
Q 012321 249 GGHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (466)
Q Consensus 249 GD~VLv~~---~~y~~t~~~~~~~l~~~gi~v~~vd~-~D~e~Le~ai~~~~tklV~lesPsNPtG~v~dl~~I~ela~~ 324 (466)
+.+|++.. ..|.--..++...++..|.++.+... ..++++.+++.+.++.+|.+..-. +.....+.++.+..++
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~--~~~~~~~~~~i~~l~~ 200 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALM--TTTMYAFKEVNDMLLE 200 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCC--TTTTTHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeec--cCCHHHHHHHHHHHHh
Confidence 34666553 33443445566678888999876642 356777666655457888885544 3345578888888887
Q ss_pred cC--CEEEEeCC
Q 012321 325 KG--AIVCIDGT 334 (466)
Q Consensus 325 ~g--illIvD~t 334 (466)
.| +.+++=..
T Consensus 201 ~~~~~~v~vGG~ 212 (258)
T 2i2x_B 201 NGIKIPFACGGG 212 (258)
T ss_dssp TTCCCCEEEEST
T ss_pred cCCCCcEEEECc
Confidence 65 56666443
No 347
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=20.38 E-value=1.8e+02 Score=27.78 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=0.0
Q ss_pred EeCCHHHHHHHHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCC
Q 012321 230 IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPF 309 (466)
Q Consensus 230 ~~~SG~aAi~~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi~v~~vd~~D~e~Le~ai~~~~tklV~lesPsNPt 309 (466)
+++.|.-+-...+.++....+--|+. .+.....-.+...+++|+.-.+ .++++.++..++.+|++++|+
T Consensus 28 iIG~G~ig~~~~~~~~~~~~~~~lva--v~d~~~~~a~~~a~~~g~~~~y------~d~~ell~~~~iDaV~I~tP~--- 96 (350)
T 4had_A 28 IISTAKIGRDNVVPAIQDAENCVVTA--IASRDLTRAREMADRFSVPHAF------GSYEEMLASDVIDAVYIPLPT--- 96 (350)
T ss_dssp EESCCHHHHHTHHHHHHHCSSEEEEE--EECSSHHHHHHHHHHHTCSEEE------SSHHHHHHCSSCSEEEECSCG---
T ss_pred EEcChHHHHHHHHHHHHhCCCeEEEE--EECCCHHHHHHHHHHcCCCeee------CCHHHHhcCCCCCEEEEeCCC---
Q ss_pred cccccHHHHHHHHHhcCCEEEEe
Q 012321 310 LRCVDVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 310 G~v~dl~~I~ela~~~gillIvD 332 (466)
.--.+++..|-++|..|++.
T Consensus 97 ---~~H~~~~~~al~aGkhVl~E 116 (350)
T 4had_A 97 ---SQHIEWSIKAADAGKHVVCE 116 (350)
T ss_dssp ---GGHHHHHHHHHHTTCEEEEC
T ss_pred ---chhHHHHHHHHhcCCEEEEe
No 348
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=20.37 E-value=3.1e+02 Score=25.65 Aligned_cols=75 Identities=12% Similarity=0.214 Sum_probs=42.0
Q ss_pred cEEEeCCHHHHHHH-HHHHhccCCCEEEEcCCCccchHHHHHhhcccC---CcEEEEeCCCCHHHHHHhccC-----CCc
Q 012321 227 STVIMASGMSASTV-MLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM---GITATVIDPADMEGLEAALNN-----NNV 297 (466)
Q Consensus 227 ~~v~~~SG~aAi~~-al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~---gi~v~~vd~~D~e~Le~ai~~-----~~t 297 (466)
..+++++|+..|-. +...|++.|-+|++....-......... +... .+.....|..|.+++++.++. .+.
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 120 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAE-LGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGAL 120 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH-HTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 46677776655533 3456778898887765443333333332 2222 344455688888877766542 125
Q ss_pred eEEEE
Q 012321 298 SLFFT 302 (466)
Q Consensus 298 klV~l 302 (466)
.+++-
T Consensus 121 D~lvn 125 (293)
T 3rih_A 121 DVVCA 125 (293)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 66654
No 349
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=20.37 E-value=3.1e+02 Score=27.86 Aligned_cols=92 Identities=12% Similarity=0.156 Sum_probs=48.3
Q ss_pred HhccCCCEE-EEcCCCccc-hHHHHHhhcccCCcEEEEeC-CCCHHH-----HHHhccCCCceEEEEeCCCCCC--c---
Q 012321 244 ALVPAGGHI-VTTTDCYRK-TRIFIETVLPKMGITATVID-PADMEG-----LEAALNNNNVSLFFTESPTNPF--L--- 310 (466)
Q Consensus 244 all~pGD~V-Lv~~~~y~~-t~~~~~~~l~~~gi~v~~vd-~~D~e~-----Le~ai~~~~tklV~lesPsNPt--G--- 310 (466)
.+...|.+| ++..+.|.. ....+.......|+++.... ..|+.. ++.+... ...+|++.+|.... -
T Consensus 120 ~l~~~G~kVllv~~D~~r~~a~eqL~~~~~~~gv~~~~~~~~~dp~~i~~~al~~a~~~-~~DvvIIDTaGr~~~~~d~~ 198 (433)
T 3kl4_A 120 FYKKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKN-KMDIIIVDTAGRHGYGEETK 198 (433)
T ss_dssp HHHHTTCCEEEEEECCSCHHHHHHHHHHHHTTTCCEECCTTCSCHHHHHHHHHHHTTTT-TCSEEEEEECCCSSSCCTTH
T ss_pred HHHHcCCeEEEEecCccchhHHHHHHHHHHhcCCceeeccccCCHHHHHHHHHHHHHhc-CCCEEEEECCCCccccCCHH
Confidence 344556555 445566654 33334444455677654332 234433 3333222 37899999996211 1
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCC
Q 012321 311 RCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 311 ~v~dl~~I~ela~~~gillIvD~t~a 336 (466)
....+.+|.+..+...+++|+|.+.+
T Consensus 199 lm~el~~i~~~~~pd~vlLVlDa~~g 224 (433)
T 3kl4_A 199 LLEEMKEMYDVLKPDDVILVIDASIG 224 (433)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEEGGGG
T ss_pred HHHHHHHHHHhhCCcceEEEEeCccc
Confidence 11123444444444678999998753
No 350
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=20.35 E-value=1.7e+02 Score=26.84 Aligned_cols=67 Identities=10% Similarity=0.108 Sum_probs=35.8
Q ss_pred cEEEeCCHHHHHH-HHHHHhccCCCEEEEcCCCccchHHHHHhhcccCC--cEEEEeCCCCHHHHHHhcc
Q 012321 227 STVIMASGMSAST-VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVIDPADMEGLEAALN 293 (466)
Q Consensus 227 ~~v~~~SG~aAi~-~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~g--i~v~~vd~~D~e~Le~ai~ 293 (466)
..+++++|+..|- .+...|++.|-+|++....-......+...++..+ +.....|..|.+++++.++
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 4566666665443 33456778898888743221111111222233334 3444467778888777664
No 351
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=20.25 E-value=44 Score=34.22 Aligned_cols=27 Identities=26% Similarity=0.359 Sum_probs=24.9
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCC
Q 012321 309 FLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 309 tG~v~dl~~I~ela~~~gillIvD~t~ 335 (466)
.|...|++++++.||++|+.||+|-++
T Consensus 99 ~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 125 (488)
T 2wc7_A 99 LGGNEAFKELLDAAHQRNIKVVLDGVF 125 (488)
T ss_dssp GTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 688889999999999999999999874
No 352
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=20.04 E-value=1.6e+02 Score=27.31 Aligned_cols=34 Identities=9% Similarity=-0.035 Sum_probs=28.5
Q ss_pred ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE
Q 012321 297 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 297 tklV~lesPsNPtG~v~dl~~I~ela~~~gillIv 331 (466)
+..|++|-. |..|......++.+++++||+.++.
T Consensus 168 Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 168 PAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp SCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 667777655 6789999999999999999988763
No 353
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=20.02 E-value=2.2e+02 Score=26.26 Aligned_cols=76 Identities=16% Similarity=0.196 Sum_probs=39.3
Q ss_pred cEEEeCCHHHHHH-HHHHHhccCCCEEEEcCCCccchHHHHHhhcccCCc--EEEEeCCCCHHHHHHhccC-----CCce
Q 012321 227 STVIMASGMSAST-VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADMEGLEAALNN-----NNVS 298 (466)
Q Consensus 227 ~~v~~~SG~aAi~-~al~all~pGD~VLv~~~~y~~t~~~~~~~l~~~gi--~v~~vd~~D~e~Le~ai~~-----~~tk 298 (466)
..+++|+|+..|- .+...|++.|-+|++....-......+...++..+. .....|..|.+++++.+++ .+..
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 111 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLD 111 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 4566666654443 334567788988877532221111112222333343 3444577788887776642 0256
Q ss_pred EEEE
Q 012321 299 LFFT 302 (466)
Q Consensus 299 lV~l 302 (466)
+++-
T Consensus 112 ~lvn 115 (271)
T 3v2g_A 112 ILVN 115 (271)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
Done!