Citrus Sinensis ID: 012325

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460------
MWCHCRMVYLPMSYLYGKRFVGPITPTVLALRKELFTVPYHEIDWNEARNLCAKEDLYYPHPLIQDVLWATLDKVVEPLLMHWPGKKLREKALRNAIKHIHYEDENTRYLCIGPVNKVLNMLCCWVEDPNSEAFKLHIPRINDYLWIAEDGMKVQGYNGSQLWDTAFAVQAIISTNLVEEYGATLKKAHKYIKDSQVLEDCPGNLDFWYRHISKGAWPFSTADHGWPISDCTSEGLKASLLLSKLSSAIVGEPIETKRLYDSVNVIFSLQNADGGFATYELMRSYPWLEVLNPAETFGDIVIDYPCVECTSASIQALTSFKKLYPGHWQEDVDHCIKRAVKFIEKIQELDGSWYGSWGVCFTYGTWFGVKGLVAAGMNYSNSSSIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQVRINCCCSTLKVTLSLEREFSINSCDY
ccCEcHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccEEEccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccCEEECccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccc
MWCHCRMVYLPMSYLYGKRFVGPITPTVLALRKELFTVPYHEIDWNEARNLCAKEDLYYPHPLIQDVLWATLDKVVEPLLMHWPGKKLREKALRNAIKHIHYEDENTRYLCIGPVNKVLNMLCCWVEDPNSEAFKLHIPRINDYLWIAEDGMKVQGYNGSQLWDTAFAVQAIISTNLVEEYGATLKKAHKYIKDSQVLEDCPGNLDFWYRHISKGAWPFSTADHGWPISDCTSEGLKASLLLSKLSSAIVGEPIETKRLYDSVNVIFSLQNADGGFATYELMRSYPWLEVLNPAETFGDIVIDYPCVECTSASIQALTSFKKLYPGHWQEDVDHCIKRAVKFIEKIQELDGSWYGSWGVCFTYGTWFGVKGLVAAGMNYSNSSSIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQVRINCCCSTLKVTLSLEREFS******
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MWCHCRMVYLPMSYLYGKRFVGPITPTVLALRKELFTVPYHEIDWNEARNLCAKEDLYYPHPLIQDVLWATLDKVVEPLLMHWPGKKLREKALRNAIKHIHYEDENTRYLCIGPVNKVLNMLCCWVEDPNSEAFKLHIPRINDYLWIAEDGMKVQGYNGSQLWDTAFAVQAIISTNLVEEYGATLKKAHKYIKDSQVLEDCPGNLDFWYRHISKGAWPFSTADHGWPISDCTSEGLKASLLLSKLSSAIVGEPIETKRLYDSVNVIFSLQNADGGFATYELMRSYPWLEVLNPAETFGDIVIDYPCVECTSASIQALTSFKKLYPGHWQEDVDHCIKRAVKFIEKIQELDGSWYGSWGVCFTYGTWFGVKGLVAAGMNYSNSSSIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQVRINCCCSTLKVTLSLEREFSINSCDY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cycloartenol synthase Converts oxidosqualene ((3S)-2,3-epoxy-2,3-dihydrosqualene) to cycloartenol.probableQ6Z2X6
Cycloartenol synthase Converts oxidosqualene to cycloartenol and 1% parkeol. Involved in plastid biogenesis. Essential for the male gametophyte function.probableP38605

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
5.-.-.-Isomerases.probable
5.4.-.-Intramolecular transferases (mutases).probable
5.4.99.-Transferring other groups.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1W6K, chain A
Confidence level:very confident
Coverage over the Query: 1-458
View the alignment between query and template
View the model in PyMOL