Citrus Sinensis ID: 012326

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460------
MAELKLSESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISGSEIFSLEMSKTEALMQAFRKAIGVRIKEEAEVIEGEVVEVQIDRPATSGAAAKTGKLTLKTTEMETVYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGTNYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYINEVTIEADEDDANAMVPE
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEECcccccHHHHHHHHHHHHHccccccCEEcccEEEcccccHHHHHHHHHHHHHcEEEEEEEEEEEEEEEEEEEcccccccccccEEEEEEEEcccEEEEEccHHHHHHHHccccccccEEEEEcccccEEEEEECcHHHcccccccccccccccccccHHHEEEEcccccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEccCEEEEEccccccHHHHHHHHHHHccccccEEEEEEcccEEEEcccccccccccccccccccEEECcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccEEEHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccccc
******************GAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISGSEIFSLEMSKTEALMQAFRKAIGVRIKEEAEVIEGEVVEVQIDRPATSGAAAKTGKLTLKTTEMETVYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGTNYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYINEV***************
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MAELKLSESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISGSEIFSLEMSKTEALMQAFRKAIGVRIKEEAEVIEGEVVEVQIDRPATSGAAAKTGKLTLKTTEMETVYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGTNYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYINEVTIEADEDDANAMVPE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
RuvB-like 2 Plays an essential role in oncogenic transformation by MYC and also modulates transcriptional activation by the LEF1/TCF1-CTNNB1 complex. May also inhibit the transcriptional activity of ATF2.confidentQ9WTM5
RuvB-like helicase 2 Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.confidentQ54UW5
RuvB-like 2 Plays an essential role in oncogenic transformation by MYC and also modulates transcriptional activation by the LEF1/TCF1-CTNNB1 complex. May also inhibit the transcriptional activity of ATF2.confidentQ9Y230

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.6.-.-Acting on acid anhydrides.probable
3.6.4.-Acting on acid anhydrides; involved in cellular and subcellular movement.probable
3.6.4.12DNA helicase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3UK6, chain A
Confidence level:very confident
Coverage over the Query: 20-127,238-441
View the alignment between query and template
View the model in PyMOL
Template: 2C9O, chain A
Confidence level:very confident
Coverage over the Query: 12-144,155-248,271-442
View the alignment between query and template
View the model in PyMOL