BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012330
(466 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 169/379 (44%), Gaps = 68/379 (17%)
Query: 111 KDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSD 168
+D GDG+FT + W++ I FS + ++ + A A +L Q E N+D
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNAD 136
Query: 169 KILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVDI 225
+ +++ + + TLD+I +CG N RF+S + D +++ R +D
Sbjct: 137 EYIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFIISMIRALDE 183
Query: 226 FWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKED 277
+ N A + ++ I+V++ V KII RK + + D D
Sbjct: 184 VMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD-----------D 232
Query: 278 ILSRFLQVTDPKYLRDI--------ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQ 329
+L++ L DP+ + I+ F+IAG +TT+ LS+ +Y L K+P V +K+ +
Sbjct: 233 LLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAE 292
Query: 330 EVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLP 389
E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EATRVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 390 DGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF--------- 439
+ + KGD V + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 343 GEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 440 -KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 403 QQFALHEATLVLGMMLKHF 421
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 169/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 81 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 138
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 139 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 185
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 186 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 234
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 235 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 294
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P VP + D L
Sbjct: 295 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVL 344
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 345 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 404
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 405 GQQFALHEATLVLGMMLKHF 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 84 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 141
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 142 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 188
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 189 EAMNKLQRTNPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 237
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 238 DLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAA 297
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 298 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 347
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 348 GGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 407
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 408 GQQFALHEATLVLGMMLKHF 427
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACP 402
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 403 GQQFALHEATLVLGMMLKHF 422
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 81 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 138
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 139 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 185
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 186 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 234
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 235 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 294
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 295 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 344
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 345 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 404
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 405 GQQFALHEATLVLGMMLKHF 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 402
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 403 GQQFALHEATLVLGMMLKHF 422
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACE 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GKQFALHEATLVLGMMLKHF 421
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 402
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 403 GQQFALHEATLVLGMMLKHF 422
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 81 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 138
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 139 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 185
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 186 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 234
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 235 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 294
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 295 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVL 344
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 345 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 404
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 405 GQQFALHEATLVLGMMLKHF 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 57/346 (16%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQ 434
+ + KGD + + R K IWGDD EEF+PER+ + + I Q
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ 387
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 57/346 (16%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQ 434
+ + KGD + + R K IWGDD EEF+PER+ + + I Q
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ 387
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 57/346 (16%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQ 434
+ + KGD + + R K IWGDD EEF+PER+ + + I Q
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ 387
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 57/346 (16%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQ 434
+ + KGD + + R K IWGDD EEF+PER+ + + I Q
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ 387
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 172/384 (44%), Gaps = 41/384 (10%)
Query: 57 LHHYMTDLAAKHGTYRLLGPF-RSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLG 115
L D A K+G + F ++ V + P +V+ L + Y K S Y L+ + G
Sbjct: 12 LQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFG 69
Query: 116 DGIF------TVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDK 169
+ +F + E+W +QR++ FS L F + A +L ++L A+
Sbjct: 70 ERLFGQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMET-FNEKAEQLVEILEAKADGQT 128
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNE---EGTRFSSAFDDASAMTLWRYVDIF 226
+ +QD+ + +D + K AFG+E + G+ + + + AS TL +++
Sbjct: 129 PVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLP-- 186
Query: 227 WKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQV- 285
K K+L + ++ I + ++++ + + +E DIL++ L+
Sbjct: 187 GKRKQLREV------RESIRFLRQVGRDWVQRRREALKRGEE-----VPADILTQILKAE 235
Query: 286 ---TDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISD 342
D + L D + F IAG +T+A L++ + L + P + ++ EV E G+K D
Sbjct: 236 EGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLD 295
Query: 343 FLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCY 402
F E L ++ YL + E+LRLYP ++ ++TL DG V + +
Sbjct: 296 F---------EDLGRLQYLSQVLKESLRLYPPAWGTFRL-LEEETLIDGVRVPGNTPLLF 345
Query: 403 QAYAMGRMKFIWGDDAEEFKPERW 426
Y MGRM + +D F P+R+
Sbjct: 346 STYVMGRMD-TYFEDPLTFNPDRF 368
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGEFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+ T + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+ T + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG ++T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+ T + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG ++T+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 402
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 403 GQQFALHEATLVLGMMLKHF 422
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+ T + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG ++T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ +IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 166/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++DL GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDLAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+ AG + T+ LS+ +Y L K+P +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K +WGDD EEF+PER+ + + I Q PF
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 402
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 403 GQQFALHEATLVLGMMLKHF 422
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 166/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+ AG + T+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 402
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 403 GQQFALHEATLVLGMMLKHF 422
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 166/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+ AG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 166/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+ T + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 166/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W + I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I + G N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLSGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 402
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 403 GQQFALHEATLVLGMMLKHF 422
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 162/377 (42%), Gaps = 62/377 (16%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+ T + W++ R I S + ++ + A A +L Q E NS
Sbjct: 79 VRDFAGDGLATSWTHEKNWKKARNILLPRLSQQAMKGYH-AMMVDIAVQLVQKW-ERLNS 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFW 227
D+ +++ + + TLD+I +CG N F ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFNYRINSFYRDQPHPFITSMVRALDEVM 186
Query: 228 KIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDIL 279
+ N A + ++ I+V++ V KII RK + + D D+L
Sbjct: 187 NKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLL 235
Query: 280 SRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV 331
+ L DP+ +R I+ F+IAG +TT+ L++ +Y L K+P V +K +E
Sbjct: 236 THMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEA 295
Query: 332 KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG 391
V S + ++++ Y+ + E LR++P P + D L
Sbjct: 296 ARVL----------VDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGE 345
Query: 392 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF----------K 440
+ + KGD + + R K +WGDD EEF+PER+ + + I Q PF +
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQ 405
Query: 441 FTAFQVSTVSRLLIKQF 457
F + + V +++K F
Sbjct: 406 FALHEATLVLGMMLKHF 422
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 165/380 (43%), Gaps = 68/380 (17%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+ AG + T+ LS+ +Y L K+P +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF-------- 439
+ + KGD + + R K IWGDD EEF+PER+ + + I Q PF
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACI 401
Query: 440 --KFTAFQVSTVSRLLIKQF 457
+F + + V +++K F
Sbjct: 402 GQQFALHEATLVLGMMLKHF 421
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 155/347 (44%), Gaps = 41/347 (11%)
Query: 114 LGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDI 173
+ I + E+W+ R + S F++ L++ + L + L A + K + +
Sbjct: 94 MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMV-PIIAQYGDVLVRNLRREAETGKPVTL 152
Query: 174 QDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLL 233
+D+F ++D I +FGV +DS+ + ++ + + ++D F+ L
Sbjct: 153 KDVFGAYSMDVITSTSFGVNIDSLNNPQD------PFVENTKKLLRFDFLDPFF-----L 201
Query: 234 NIGSEARLKQRIEVIDTFVYK-----IIRKKTDQMHDFQEEYTSMKKEDILSRFL----- 283
+I L +EV++ V+ +RK +M + + E T + D L +
Sbjct: 202 SITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNS 261
Query: 284 -QVTDPKYLRDIILN-----FVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGA 337
+ K L D+ L F+ AG +TT++ LS+ +Y L HP VQ+K+ +E+
Sbjct: 262 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 321
Query: 338 KDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKG 397
K + + + +M YL + ETLRL+P ++C D + +G + KG
Sbjct: 322 KAPPTY---------DTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKG 371
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAF 444
+V +YA+ R W + E+F PER+ +N P+ +T F
Sbjct: 372 VVVMIPSYALHRDPKYW-TEPEKFLPERFSKKNK--DNIDPYIYTPF 415
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 155/347 (44%), Gaps = 41/347 (11%)
Query: 114 LGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDI 173
+ I + E+W+ R + S F++ L++ + L + L A + K + +
Sbjct: 92 MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMV-PIIAQYGDVLVRNLRREAETGKPVTL 150
Query: 174 QDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLL 233
+D+F ++D I +FGV +DS+ + ++ + + ++D F+ L
Sbjct: 151 KDVFGAYSMDVITSTSFGVNIDSLNNPQD------PFVENTKKLLRFDFLDPFF-----L 199
Query: 234 NIGSEARLKQRIEVIDTFVYK-----IIRKKTDQMHDFQEEYTSMKKEDILSRFL----- 283
+I L +EV++ V+ +RK +M + + E T + D L +
Sbjct: 200 SITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNS 259
Query: 284 -QVTDPKYLRDIILN-----FVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGA 337
+ K L D+ L F+ AG +TT++ LS+ +Y L HP VQ+K+ +E+
Sbjct: 260 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 319
Query: 338 KDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKG 397
K + + + +M YL + ETLRL+P ++C D + +G + KG
Sbjct: 320 KAPPTY---------DTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKG 369
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAF 444
+V +YA+ R W + E+F PER+ +N P+ +T F
Sbjct: 370 VVVMIPSYALHRDPKYW-TEPEKFLPERFSKKNK--DNIDPYIYTPF 413
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 155/347 (44%), Gaps = 41/347 (11%)
Query: 114 LGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDI 173
+ I + E+W+ R + S F++ L++ + L + L A + K + +
Sbjct: 93 MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMV-PIIAQYGDVLVRNLRREAETGKPVTL 151
Query: 174 QDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLL 233
+D+F ++D I +FGV +DS+ + ++ + + ++D F+ L
Sbjct: 152 KDVFGAYSMDVITSTSFGVNIDSLNNPQD------PFVENTKKLLRFDFLDPFF-----L 200
Query: 234 NIGSEARLKQRIEVIDTFVYK-----IIRKKTDQMHDFQEEYTSMKKEDILSRFL----- 283
+I L +EV++ V+ +RK +M + + E T + D L +
Sbjct: 201 SITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNS 260
Query: 284 -QVTDPKYLRDIILN-----FVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGA 337
+ K L D+ L F+ AG +TT++ LS+ +Y L HP VQ+K+ +E+
Sbjct: 261 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 320
Query: 338 KDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKG 397
K + + + +M YL + ETLRL+P ++C D + +G + KG
Sbjct: 321 KAPPTY---------DTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKG 370
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAF 444
+V +YA+ R W + E+F PER+ +N P+ +T F
Sbjct: 371 VVVMIPSYALHRDPKYW-TEPEKFLPERFSKKNK--DNIDPYIYTPF 414
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 137/328 (41%), Gaps = 38/328 (11%)
Query: 118 IFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF 177
IF + E W+ R S L + L +L E N +D+ L
Sbjct: 133 IFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRL-EEVTNESGYVDVLTLL 191
Query: 178 MKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNI-- 235
+ LD+ + + LD + + FD A+ + DIF+KI L
Sbjct: 192 RRVMLDTSNTLFLRIPLDE----SAIVVKIQGYFDAWQALLI--KPDIFFKISWLYKKYE 245
Query: 236 GSEARLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRD 293
S LK IEV+ + I +K ++ DF E +K L+R + +
Sbjct: 246 KSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDLTR-------ENVNQ 298
Query: 294 IILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEE 353
IL +IA DT + +L + ++++ KHP V+E I++E++ G +DI +
Sbjct: 299 CILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKI----------D 348
Query: 354 ALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFI 413
++K+ + I E++R P V + + DD + DG+ V+KG + M R++F
Sbjct: 349 DIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI-DGYPVKKGTNIILNIGRMHRLEFF 407
Query: 414 WGDDAEEFKPERWLDENGIFQKESPFKF 441
KP + EN F K P+++
Sbjct: 408 P-------KPNEFTLEN--FAKNVPYRY 426
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 165/413 (39%), Gaps = 54/413 (13%)
Query: 33 SGNKQKKYHPIGGTVFNQLLNFNRLHH----YMTDLAAKHGTYRL-LGPFRSEVYSSDPA 87
G + + P+ G L + RL +M+ L R+ LGP VY+
Sbjct: 16 PGAPELREPPVAGGGVPLLGHGWRLARDPLAFMSQLRDHGDVVRIKLGP--KTVYAVTNP 73
Query: 88 NVEYMLKTNFDNYGKGSYNYSILKDLLG-DGIFTVDGEKWREQRKISSHEFSTKVLRDFS 146
+ L N D + G + L+ LLG +G+ T +G R QR+ F +
Sbjct: 74 ELTGALALNPDYHIAGPL-WESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAI---- 128
Query: 147 SAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGS---NEE 203
A+ + A L+E K +D +T +S F+VA V + +E
Sbjct: 129 -PAYGPIMEEEAHALTERWQPGKTVD-------ATSES-FRVAVRVAARCLLRGQYMDER 179
Query: 204 GTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM 263
R A R V + +L + + R + + V +II ++
Sbjct: 180 AERLCVALATVFRGMYRRMVVPLGPLYRL-PLPANRRFNDALADLHLLVDEIIAER---- 234
Query: 264 HDFQEEYTSMKKEDILSRFLQVTD-------PKYLRDIILNFVIAGKDTTAATLSWFIYM 316
+ K +D+L+ L+ D + + D ++ + G +T A+T+ W +
Sbjct: 235 -----RASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQA 289
Query: 317 LCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVP 376
L HP ++I EV+ TG + ++ F E + K+ + I E +RL PAV
Sbjct: 290 LADHPEHADRIRDEVEAVTGGRPVA-F---------EDVRKLRHTGNVIVEAMRLRPAVW 339
Query: 377 VDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDE 429
V + ++ L G+ + G + Y YA+ R + DD EF P+RWL E
Sbjct: 340 VLTRRAVAESEL-GGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPDRWLPE 390
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 139/323 (43%), Gaps = 25/323 (7%)
Query: 117 GIFTVDGEKWREQR-KISSHEFSTKVLRDFSS---AAFRKNAAKLAQLLSEAANSDKILD 172
G+F ++G +WR R +++ S K ++ F A R + L + + + A LD
Sbjct: 102 GVFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLD 161
Query: 173 IQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKL 232
+Q T+++ FG L V S S F A + V + + + L
Sbjct: 162 VQPSIFHYTIEASNLALFGERLGLVGHSPSSA---SLNFLHALEVMFKSTVQLMFMPRSL 218
Query: 233 LNIGSEARLKQRIEVIDT-FVY--KIIRKKTDQMH-DFQEEYTSMKKEDILSRFLQVTDP 288
S K+ E D F Y I+K ++ + + YT + E +L L +
Sbjct: 219 SRWISPKVWKEHFEAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIVAELLLKAELSL--- 275
Query: 289 KYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAG 348
+ ++ + DTTA L ++ L ++P VQ+ + QE A A IS+
Sbjct: 276 EAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAA--AASISEH----- 328
Query: 349 CISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMG 408
++A ++ L AA+ ETLRLYP V + + S D + + + G +V Y++G
Sbjct: 329 --PQKATTELPLLRAALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLG 385
Query: 409 RMKFIWGDDAEEFKPERWLDENG 431
R ++ E + P+RWLD G
Sbjct: 386 RNAALF-PRPERYNPQRWLDIRG 407
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 24/238 (10%)
Query: 207 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRK-----KTD 261
FS + A++ +++ Y W +L G +L + V+ F+ ++I K K
Sbjct: 188 FSENVELAASASVFLYNAFPWI--GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQ 245
Query: 262 QMHDFQEEY---TSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLC 318
F + Y K D S F + + L + +IAG +TT L W I +
Sbjct: 246 LPQHFVDAYLDEMDQGKNDPSSTFSK----ENLIFSVGELIIAGTETTTNVLRWAILFMA 301
Query: 319 KHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVD 378
+P +Q ++ +E+ G G S + KM Y A + E LR VP+
Sbjct: 302 LYPNIQGQVQKEIDLIMGPN---------GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLG 352
Query: 379 AKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE 436
S+D + G+S+ KG V Y++ + W D E F PER+LD +G F K+
Sbjct: 353 IFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-RDPEVFHPERFLDSSGYFAKK 409
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 24/238 (10%)
Query: 207 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRK-----KTD 261
FS + A++ +++ Y W +L G +L + V+ F+ ++I K K
Sbjct: 188 FSENVELAASASVFLYNAFPWI--GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQ 245
Query: 262 QMHDFQEEY---TSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLC 318
F + Y K D S F + + L + +IAG +TT L W I +
Sbjct: 246 LPQHFVDAYLDEMDQGKNDPSSTFSK----ENLIFSVGELIIAGTETTTNVLRWAILFMA 301
Query: 319 KHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVD 378
+P +Q ++ +E+ G G S + KM Y A + E LR VP+
Sbjct: 302 LYPNIQGQVQKEIDLIMGPN---------GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLG 352
Query: 379 AKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE 436
S+D + G+S+ KG V Y++ + W D E F PER+LD +G F K+
Sbjct: 353 IFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-RDPEVFHPERFLDSSGYFAKK 409
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 289 KYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAG 348
K L + +A +TTA +L W +Y L ++P Q +++QEV+
Sbjct: 282 KELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTP------- 334
Query: 349 CISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMG 408
E L M YL A + E++RL P+VP + T+ +++ KG ++ +G
Sbjct: 335 --RAEDLRNMPYLKACLKESMRLTPSVPFTTR-TLDKPTVLGEYALPKGTVLTLNTQVLG 391
Query: 409 RMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQVS 447
+ + +D+ +F+PERWL + +K +PF F +
Sbjct: 392 SSEDNF-EDSHKFRPERWLQKE---KKINPFAHLPFGIG 426
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 240 RLKQRIEVIDTFVYKIIRKKTDQMHDFQ---------EEYTSMKKEDILSRFLQVTDPKY 290
RLKQ IE D V K +R+ + M Q + + E+ + L+ +
Sbjct: 224 RLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLE----GH 279
Query: 291 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC- 349
+ +++ I G +TTA+TLSW + L HP +Q ++ +E+ G A C
Sbjct: 280 VHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPG--------ASCS 331
Query: 350 -ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMG 408
++ + ++ L+A I E LRL P VP+ + + G+ + +G +V
Sbjct: 332 RVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAH 391
Query: 409 RMKFIWGDDAEEFKPERWLDENG 431
+ +W + EF+P+R+L+
Sbjct: 392 LDETVW-EQPHEFRPDRFLEPGA 413
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 164/408 (40%), Gaps = 47/408 (11%)
Query: 52 LNFNRLHHYMTDLAAKHGTYRL--LGPFRSEVYSSDPANVEYMLKTNFDNYGKG---SYN 106
LN ++++ + ++ ++G LGP R V A E ++ + G+G +++
Sbjct: 27 LNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86
Query: 107 YSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEA 164
+ + K G G+ +GE+ ++ R+ FS LRDF + + A L +A
Sbjct: 87 W-VFK---GYGVVFSNGERAKQLRR-----FSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 165 ANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRY 222
+I F ++ + I + FG D R ++ + +
Sbjct: 138 LRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQL 197
Query: 223 VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRF 282
++F + K L G + + Q ++ ++ F+ K + Q D + F
Sbjct: 198 YEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHN-------QRTLDPNSPRDFIDSF 249
Query: 283 L-----QVTDPK---YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV 331
L + +P YL++++ LN I G +T + TL + +L KHP V+ K+ +E+
Sbjct: 250 LIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI 309
Query: 332 KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG 391
G F E KM Y+ A I E R +P+ DT
Sbjct: 310 DRVIGKNRQPKF---------EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 392 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPF 439
F + KG V ++ R + + ++F P+ +L+E G F+K F
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSDAF 407
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 135/339 (39%), Gaps = 36/339 (10%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLNI--GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ + A KM Y A I E RL +P + DT G+ + K V
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPF 439
+ + + + F P +LD NG ++ F
Sbjct: 370 -FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGF 407
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 135/339 (39%), Gaps = 36/339 (10%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ + A KM Y A I E RL +P + DT G+ + K V
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPF 439
+ + + + F P +LD NG ++ F
Sbjct: 370 -FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGF 407
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 135/339 (39%), Gaps = 36/339 (10%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLNI--GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ + A KM Y A I E RL +P + DT G+ + K V
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPF 439
+ + + + F P +LD NG ++ F
Sbjct: 370 -FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGF 407
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 135/339 (39%), Gaps = 36/339 (10%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLNI--GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ + A KM Y A I E RL +P + DT G+ + K V
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPF 439
+ + + + F P +LD NG ++ F
Sbjct: 370 -FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGF 407
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 164/408 (40%), Gaps = 47/408 (11%)
Query: 52 LNFNRLHHYMTDLAAKHGTYRL--LGPFRSEVYSSDPANVEYMLKTNFDNYGKG---SYN 106
LN ++++ + ++ ++G LGP R V A E ++ + G+G +++
Sbjct: 27 LNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86
Query: 107 YSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEA 164
+ + K G G+ +GE+ ++ R+ FS LRDF + + A L +A
Sbjct: 87 W-VFK---GYGVVFSNGERAKQLRR-----FSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 165 ANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRY 222
+I F ++ + I + FG D R ++ + +
Sbjct: 138 LRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGSFQFTSTSTGQL 197
Query: 223 VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRF 282
++F + K L G + + Q ++ ++ F+ K + Q D + F
Sbjct: 198 YEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHN-------QRTLDPNSPRDFIDSF 249
Query: 283 L-----QVTDPK---YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV 331
L + +P YL++++ LN AG +T + TL + +L KHP V+ K+ +E+
Sbjct: 250 LIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEI 309
Query: 332 KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG 391
G F E KM Y+ A I E R +P+ DT
Sbjct: 310 DRVIGKNRQPKF---------EDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRD 360
Query: 392 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPF 439
F + KG V ++ R + + ++F P+ +L+E G F+K F
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSDAF 407
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 26/211 (12%)
Query: 227 WKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVT 286
W + L + S R + I YK I+K+ QE K +DIL L T
Sbjct: 191 WLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQS----QE-----KIDDILQTLLDAT 241
Query: 287 --DPKYLRD-----IILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKD 339
D + L D +++ ++AG+ T++ T +W + L + +Q+K E K G
Sbjct: 242 YKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN- 300
Query: 340 ISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDM 399
++ + L+ ++ L I ETLRL P + + +M + T+ G+++ G
Sbjct: 301 -------LPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQ 352
Query: 400 VCYQAYAMGRMKFIWGDDAEEFKPERWLDEN 430
VC R+K W + +F P+R+L +N
Sbjct: 353 VCVSPTVNQRLKDSWVERL-DFNPDRYLQDN 382
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 135/339 (39%), Gaps = 36/339 (10%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLNI--GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ + A KM Y A I E RL +P + DT G+ + K V
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPF 439
+ + + + F P +LD NG ++ F
Sbjct: 370 -FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGF 407
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 163/408 (39%), Gaps = 47/408 (11%)
Query: 52 LNFNRLHHYMTDLAAKHGTYRL--LGPFRSEVYSSDPANVEYMLKTNFDNYGKG---SYN 106
LN ++++ + ++ ++G LGP R V A E ++ + G+G +++
Sbjct: 27 LNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86
Query: 107 YSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEA 164
+ + K G G+ +GE+ ++ R+ FS LRDF + + A L +A
Sbjct: 87 W-VFK---GYGVVFSNGERAKQLRR-----FSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 165 ANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRY 222
+I F ++ + I + FG D R ++ + +
Sbjct: 138 LRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQL 197
Query: 223 VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRF 282
++F + K L G + + Q ++ ++ F+ K + Q D + F
Sbjct: 198 YEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHN-------QRTLDPNSPRDFIDSF 249
Query: 283 L-----QVTDPK---YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV 331
L + +P YL++++ L I G +T + TL + +L KHP V+ K+ +E+
Sbjct: 250 LIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI 309
Query: 332 KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG 391
G F E KM Y+ A I E R +P+ DT
Sbjct: 310 DRVIGKNRQPKF---------EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 392 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPF 439
F + KG V ++ R + + ++F P+ +L+E G F+K F
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSDAF 407
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 295 ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEA 354
+ + AG +TT+ TL + + +L K+P ++EK+ +E+ G I I +
Sbjct: 272 VADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIP-------AIKDR- 323
Query: 355 LEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC--YQAYAMGRMKF 412
++M Y+ A + E R VP + + DT+ G+ + KG +V + +F
Sbjct: 324 -QEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEF 382
Query: 413 IWGDDAEEFKPERWLDENGIFQKESPFK 440
D E+FKPE +L+ENG F+ FK
Sbjct: 383 ---PDPEKFKPEHFLNENGKFKYSDYFK 407
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 163/408 (39%), Gaps = 47/408 (11%)
Query: 52 LNFNRLHHYMTDLAAKHGTYRL--LGPFRSEVYSSDPANVEYMLKTNFDNYGKG---SYN 106
LN ++++ + ++ ++G LGP R V A E ++ + G+G +++
Sbjct: 27 LNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86
Query: 107 YSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEA 164
+ + K G G+ +GE+ ++ R+ FS LRDF + + A L +A
Sbjct: 87 W-VFK---GYGVVFSNGERAKQLRR-----FSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 165 ANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRY 222
+I F ++ + I + FG D R ++ + +
Sbjct: 138 LRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQL 197
Query: 223 VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRF 282
++F + K L G + + Q ++ ++ F+ K + Q D + F
Sbjct: 198 YEMFSSVMKHLP-GPQQQAFQCLQGLEDFIAKKVEHN-------QRTLDPNSPRDFIDSF 249
Query: 283 L-----QVTDPK---YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV 331
L + +P YL++++ L I G +T + TL + +L KHP V+ K+ +E+
Sbjct: 250 LIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI 309
Query: 332 KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG 391
G F E KM Y+ A I E R +P+ DT
Sbjct: 310 DRVIGKNRQPKF---------EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 392 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPF 439
F + KG V ++ R + + ++F P+ +L+E G F+K F
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSDAF 407
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 291 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCI 350
L+D IL + AG +T + LS F +L +H ++E++ QE + L+++ +
Sbjct: 244 LKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNK----------LQLSQEL 293
Query: 351 SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 410
+ E L+KM YL + E LRL P V + D GF KG +V YQ
Sbjct: 294 TAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQF-QGFHFPKGWLVSYQISQTHAD 352
Query: 411 KFIWGDDAEEFKPERWLDENGIFQKESPFKFTAF 444
++ D E+F PER+ +G PF F
Sbjct: 353 PDLY-PDPEKFDPERF-TPDGSATHNPPFAHVPF 384
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 163/408 (39%), Gaps = 47/408 (11%)
Query: 52 LNFNRLHHYMTDLAAKHGTYRL--LGPFRSEVYSSDPANVEYMLKTNFDNYGKG---SYN 106
LN ++++ + ++ ++G LGP R V A E ++ + G+G +++
Sbjct: 27 LNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86
Query: 107 YSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEA 164
+ + K G G+ +GE+ ++ R+ FS LRDF + + A L +A
Sbjct: 87 W-VFK---GYGVVFSNGERAKQLRR-----FSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 165 ANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRY 222
+I F ++ + I + FG D R ++ + +
Sbjct: 138 LRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQL 197
Query: 223 VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRF 282
++F + K L G + + Q ++ ++ F+ K + Q D + F
Sbjct: 198 YEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHN-------QRTLDPNSPRDFIDSF 249
Query: 283 L-----QVTDPK---YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV 331
L + +P YL++++ L + G +T + TL + +L KHP V+ K+ +E+
Sbjct: 250 LIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI 309
Query: 332 KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG 391
G F E KM Y+ A I E R +P+ DT
Sbjct: 310 DRVIGKNRQPKF---------EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 392 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPF 439
F + KG V ++ R + + ++F P+ +L+E G F+K F
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSDAF 407
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 291 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCI 350
LR ++ + AG TT+ TL+W + ++ HP VQ ++ QE+ + G + +
Sbjct: 273 LRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPE-------M 325
Query: 351 SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 410
++A M Y A I E R VP+ S D GF + KG + ++ +
Sbjct: 326 GDQA--HMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKD 383
Query: 411 KFIWGDDAEEFKPERWLDENGIFQKESPF 439
+ +W + F PE +LD G F K F
Sbjct: 384 EAVW-EKPFRFHPEHFLDAQGHFVKPEAF 411
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 150/377 (39%), Gaps = 58/377 (15%)
Query: 81 VYSSDPANVEYMLKTNFDNYGK------GSYNYSILKDLLGDGIFTVDGEKWREQRKISS 134
VY DP +V + K+ N + +Y+ + + G+ W++ R +
Sbjct: 59 VYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPI---GVLLKKSAAWKKDRVALN 115
Query: 135 HEF----STKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAF 190
E +TK A R + L + + +A + + DI D + +SI V F
Sbjct: 116 QEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIF 175
Query: 191 GVE---LDSVCGSNEEGTRFSSAFDD---ASAMTLWRYVDIF-------WKIKKLLNIGS 237
G L+ V N E RF A S L D+F WK ++ +
Sbjct: 176 GERQGMLEEVV--NPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKD----HVAA 229
Query: 238 EARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY--LRDII 295
+ + ++ Y +R+K HD++ IL R L + + ++ +
Sbjct: 230 WDVIFSKADIYTQNFYWELRQKGSVHHDYR---------GILYRLLGDSKMSFEDIKANV 280
Query: 296 LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEA--TGAKDISDFLKVAGCISEE 353
+ G DTT+ TL W +Y + ++ VQ+ + EV A D++ L++
Sbjct: 281 TEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL---- 336
Query: 354 ALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFI 413
L A+I ETLRL+P + V + +D + + + +V YA+GR
Sbjct: 337 -------LKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTF 388
Query: 414 WGDDAEEFKPERWLDEN 430
+ D E F P RWL ++
Sbjct: 389 FF-DPENFDPTRWLSKD 404
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 150/377 (39%), Gaps = 58/377 (15%)
Query: 81 VYSSDPANVEYMLKTNFDNYGK------GSYNYSILKDLLGDGIFTVDGEKWREQRKISS 134
VY DP +V + K+ N + +Y+ + + G+ W++ R +
Sbjct: 56 VYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPI---GVLLKKSAAWKKDRVALN 112
Query: 135 HEF----STKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAF 190
E +TK A R + L + + +A + + DI D + +SI V F
Sbjct: 113 QEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIF 172
Query: 191 GVE---LDSVCGSNEEGTRFSSAFDD---ASAMTLWRYVDIF-------WKIKKLLNIGS 237
G L+ V N E RF A S L D+F WK ++ +
Sbjct: 173 GERQGMLEEVV--NPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKD----HVAA 226
Query: 238 EARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY--LRDII 295
+ + ++ Y +R+K HD++ IL R L + + ++ +
Sbjct: 227 WDVIFSKADIYTQNFYWELRQKGSVHHDYR---------GILYRLLGDSKMSFEDIKANV 277
Query: 296 LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEA--TGAKDISDFLKVAGCISEE 353
+ G DTT+ TL W +Y + ++ VQ+ + EV A D++ L++
Sbjct: 278 TEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL---- 333
Query: 354 ALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFI 413
L A+I ETLRL+P + V + +D + + + +V YA+GR
Sbjct: 334 -------LKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTF 385
Query: 414 WGDDAEEFKPERWLDEN 430
+ D E F P RWL ++
Sbjct: 386 FF-DPENFDPTRWLSKD 401
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 291 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCI 350
LR ++ + AG TT+ TL+W + ++ HP VQ ++ QE+ + G + +
Sbjct: 273 LRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPE-------M 325
Query: 351 SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 410
++A M Y A I E R VP+ S D GF + KG + ++ +
Sbjct: 326 GDQA--HMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKD 383
Query: 411 KFIWGDDAEEFKPERWLDENGIFQKESPF 439
+ +W + F PE +LD G F K F
Sbjct: 384 EAVW-EKPFRFHPEHFLDAQGHFVKPEAF 411
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 16/186 (8%)
Query: 250 TFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAAT 309
TF IR TD + + +E + ++ Q++D K + +I+L+ AG DT
Sbjct: 245 TFEKGHIRDITDSLIEHCQEKQLDENANV-----QLSDEKII-NIVLDLFGAGFDTVTTA 298
Query: 310 LSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETL 369
+SW + L +P VQ KI +E+ G +S+ + + Y+ A I ET
Sbjct: 299 ISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPR-------LSDRS--HLPYMEAFILETF 349
Query: 370 RLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDE 429
R VP + DT GF + KG V + + + +W + + EF PER+L
Sbjct: 350 RHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPS-EFLPERFLTP 408
Query: 430 NGIFQK 435
+G K
Sbjct: 409 DGAIDK 414
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 135/339 (39%), Gaps = 36/339 (10%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +G +W+ R+ FS +RDF + + + AQ L E K +
Sbjct: 91 GYGVIFANGNRWKVLRR-----FSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
+D LF T + I + FG ++E + + F ++ + +F
Sbjct: 146 MDPTFLFQSITANIICSIVFGKRFHY---QDQEFLKMLNLFYQTFSLISSVFGQLFELFS 202
Query: 231 KLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEYT-SMKKE--DILS 280
L G+ ++ + ++ I+ ++ + K + + D + Y M+KE + S
Sbjct: 203 GFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L L+ AG +TT+ TL + ++ K+P V E++ +E+++ G
Sbjct: 263 EFSH----QNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRP 318
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ A KM Y A I E R +P+ + T G+ + K D
Sbjct: 319 PELHDRA---------KMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPK-DTE 368
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPF 439
+ + + + + F P+ +LD NG +K F
Sbjct: 369 VFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAF 407
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 13/153 (8%)
Query: 290 YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKV 346
YL++++ LN AG +T + TL + +L KHP V+ K+ +E+ G F
Sbjct: 265 YLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF--- 321
Query: 347 AGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYA 406
E KM Y A I E R +P+ + DT F + KG V +
Sbjct: 322 ------EDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGS 375
Query: 407 MGRMKFIWGDDAEEFKPERWLDENGIFQKESPF 439
+ R + + +F P+ +LD+ G F+K F
Sbjct: 376 VLRDPRFF-SNPRDFNPQHFLDKKGQFKKSDAF 407
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 119/299 (39%), Gaps = 62/299 (20%)
Query: 157 LAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGS-NEEGTRFSSAFDDAS 215
L + + + + + DI++ +SI V FG L + + N E +F A
Sbjct: 144 LHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAV---- 199
Query: 216 AMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKT--------DQMHDFQ 267
+F LLN+ E +Y++ R KT D + +
Sbjct: 200 -------YKMFHTSVPLLNVPPE-------------LYRLFRTKTWRDHVAAWDTIFNKA 239
Query: 268 EEYTSMKKEDILSRF-----------LQVTDPKYLRDI---ILNFVIAGKDTTAATLSWF 313
E+YT + +D+ + L ++ L D+ I + G +TT+ TL W
Sbjct: 240 EKYTEIFYQDLRRKTEFRNYPGILYCLLKSEKMLLEDVKANITEMLAGGVNTTSMTLQWH 299
Query: 314 IYMLCKHPAVQEKIVQEVKEA--TGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRL 371
+Y + + VQE + +EV A DIS L++ L A+I ETLRL
Sbjct: 300 LYEMARSLNVQEMLREEVLNARRQAEGDISKMLQMVPL-----------LKASIKETLRL 348
Query: 372 YPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDEN 430
+P + SD L D + + +V YAMGR + ++F P RWL ++
Sbjct: 349 HPISVTLQRYPESDLVLQD-YLIPAKTLVQVAIYAMGRDPAFFS-SPDKFDPTRWLSKD 405
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 139/376 (36%), Gaps = 77/376 (20%)
Query: 124 EKWREQRKISSHEFSTKVLRDFSSAAFRKN----------AAKLAQLLSEAANSDKILDI 173
E W+ QR+ + ++R+F + R A +L LL + LD
Sbjct: 99 EHWKVQRRAAH-----SMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDP 153
Query: 174 QDLFMKSTLDSIFKVAFGV-------ELDSVCGSNEEGTRFSSAFDDASAMTLWRY---- 222
+ L + + + + V FG E + NEE R A M +Y
Sbjct: 154 RPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNP 213
Query: 223 -------------------VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM 263
+D F + + L G+ R +++D F+ +K
Sbjct: 214 VRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPR-----DMMDAFILSAEKKAAGDS 268
Query: 264 HDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAV 323
H + E++ P + DI A +DT + L W + + ++P V
Sbjct: 269 HG---GGARLDLENV---------PATITDIF----GASQDTLSTALQWLLLLFTRYPDV 312
Query: 324 QEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCF 383
Q ++ E+ + G + C+ ++ + Y+ A + E +R VPV
Sbjct: 313 QTRVQAELDQVVGRDRLP-------CMGDQ--PNLPYVLAFLYEAMRFSSFVPVTIPHAT 363
Query: 384 SDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTA 443
+ +T G+ + K +V +++ W + E F P R+LD++G+ K+ +
Sbjct: 364 TANTSVLGYHIPKDTVVFVNQWSVNHDPLKW-PNPENFDPARFLDKDGLINKDLTSRVMI 422
Query: 444 FQVSTVSRLLIKQFSK 459
F V R + ++ SK
Sbjct: 423 FSVGK-RRCIGEELSK 437
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 360
AG +TT + + W + L +P V++K+ +E+ + G IS+ ++
Sbjct: 284 AGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVG-------FSRTPTISDR--NRLLL 334
Query: 361 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE 420
L A I E LRL P P+ + D+ F+V KG V +A+ + W ++
Sbjct: 335 LEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEW-HQPDQ 393
Query: 421 FKPERWLDENG---IFQKESPFKFTAFQVSTVSRLLIKQ 456
F PER+L+ G I S F A S + +L +Q
Sbjct: 394 FMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQ 432
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 16/134 (11%)
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAK---DISDFLKVAGCISEEALEK 357
AG DT +SW + L P +Q KI +E+ G + +SD +
Sbjct: 293 AGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSD------------RPQ 340
Query: 358 MHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDD 417
+ YL A I ET R +P + DT +GF + K V + + +W +D
Sbjct: 341 LPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELW-ED 399
Query: 418 AEEFKPERWLDENG 431
EF+PER+L +G
Sbjct: 400 PSEFRPERFLTADG 413
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 142/362 (39%), Gaps = 49/362 (13%)
Query: 97 FDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNA 154
F G + I K L GI + +G++W+E R+ FS LR+F +
Sbjct: 76 FSGRGNSPISQRITKGL---GIISSNGKRWKEIRR-----FSLTTLRNFGMGKRSIEDRV 127
Query: 155 AKLAQLLSEAANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFD 212
+ A L E K F+ + + I V F D ++ F+
Sbjct: 128 QEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDY---KDQNFLTLMKRFN 184
Query: 213 DASAMTLWRYVDIFWKIKKLLNI--GSEARLKQRIEVIDTFVYKIIRKK-----TDQMHD 265
+ + ++ + L++ G+ ++ + + + +++ + +++ + D
Sbjct: 185 ENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLDVNNPRD 244
Query: 266 FQEEY---TSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPA 322
F + + +K++ S F + + L + + +AG +TT+ TL + + +L KHP
Sbjct: 245 FIDCFLIKMEQEKDNQKSEF----NIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPE 300
Query: 323 VQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMC 382
V K+ +E+ G + C+ + + M Y A + E R VP
Sbjct: 301 VTAKVQEEIDHVIGRHR-------SPCMQDRS--HMPYTDAVVHEIQRYSDLVPTGVPHA 351
Query: 383 FSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAE-----EFKPERWLDENGIFQKES 437
+ DT + + KG + M + + DD E F P +LD+NG F+K
Sbjct: 352 VTTDTKFRNYLIPKGTTI------MALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSD 405
Query: 438 PF 439
F
Sbjct: 406 YF 407
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 40/197 (20%)
Query: 248 IDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTA 307
ID F+ K+ ++K +Q +F E + D+L AG +TT+
Sbjct: 247 IDCFLIKMEKEKQNQQSEFTIENLVITAADLLG--------------------AGTETTS 286
Query: 308 ATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITE 367
TL + + +L KHP V K+ +E++ G + C+ + M Y A + E
Sbjct: 287 TTLRYALLLLLKHPEVTAKVQEEIERVVGRNR-------SPCMQDRG--HMPYTDAVVHE 337
Query: 368 TLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGD-----DAEEFK 422
R +P + D + + KG + + + + D + E F
Sbjct: 338 VQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTI------LTSLTSVLHDNKEFPNPEMFD 391
Query: 423 PERWLDENGIFQKESPF 439
P +LDE G F+K + F
Sbjct: 392 PRHFLDEGGNFKKSNYF 408
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 140/338 (41%), Gaps = 42/338 (12%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDKILD 172
G GI +G+KW+E R+ FS LR+F + + A+ L E K
Sbjct: 90 GFGIVFSNGKKWKEIRR-----FSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASP 144
Query: 173 IQDLFMK--STLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
F+ + + I + F D +++ ++ + ++ ++
Sbjct: 145 CDPTFILGCAPCNVICSIIFHKRFDY---KDQQFLNLMEKLNENIEILSSPWIQVYNNFP 201
Query: 231 KLLNI--GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEYTSMKKEDILSRFL 283
LL+ G+ +L + + + +++ + +++ + M DF + + +++ ++
Sbjct: 202 ALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPS 261
Query: 284 QVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDF 343
+ T + L + ++ AG +TT+ TL + + +L KHP V K+ +E++ G
Sbjct: 262 EFTI-ESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNR---- 316
Query: 344 LKVAGCISEEALEKMHYLHAAITETLR---LYPAVPVDAKMC---FSDDTLPDGFSVRKG 397
+ C+ + + M Y A + E R L P A C F + +P G ++
Sbjct: 317 ---SPCMQDRS--HMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTI--- 368
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQK 435
++ + +F + E F P +LDE G F+K
Sbjct: 369 -LISLTSVLHDNKEF---PNPEMFDPHHFLDEGGNFKK 402
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/338 (19%), Positives = 139/338 (41%), Gaps = 42/338 (12%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDKILD 172
G GI +G+KW+E R+ FS LR+F + + A+ L E K
Sbjct: 92 GFGIVFSNGKKWKEIRR-----FSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASP 146
Query: 173 IQDLFMK--STLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
F+ + + I + F D +++ ++ + ++ I
Sbjct: 147 CDPTFILGCAPCNVICSIIFHKRFDY---KDQQFLNLMEKLNENIKILSSPWIQICNNFS 203
Query: 231 KLLNI--GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEYTSMKKEDILSRFL 283
+++ G+ +L + + + +++ + +++ + M DF + + +++ ++
Sbjct: 204 PIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPS 263
Query: 284 QVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDF 343
+ T + L + ++ AG +TT+ TL + + +L KHP V K+ +E++ G
Sbjct: 264 EFTI-ESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNR---- 318
Query: 344 LKVAGCISEEALEKMHYLHAAITETLR---LYPAVPVDAKMC---FSDDTLPDGFSVRKG 397
+ C+ + + M Y A + E R L P A C F + +P G ++
Sbjct: 319 ---SPCMQDRS--HMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTI--- 370
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQK 435
++ + +F + E F P +LDE G F+K
Sbjct: 371 -LISLTSVLHDNKEF---PNPEMFDPHHFLDEGGNFKK 404
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 348 GCISEEALEKMHYLHAAITETLRLYPAVPVD---AKMCFSDDTLPDGFSVRKGDMV-CYQ 403
G ++ EA+E+M + + E+LR+ P VP AK F+ ++ F V+KG+M+ YQ
Sbjct: 317 GNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQ 376
Query: 404 AYAMGRMKFIWGDDAEEFKPERWLDEN 430
+A K D EE+ P+R++ +
Sbjct: 377 PFATKDPKVF--DRPEEYVPDRFVGDG 401
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 17/206 (8%)
Query: 222 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 280
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+S AL ++ L + ETLRL+P + + ++ + + G + +GD+V
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLV 345
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERW 426
R+ + D +F P R+
Sbjct: 346 AASPAISNRIPEDF-PDPHDFVPARY 370
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 17/206 (8%)
Query: 222 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 280
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+S AL ++ L + ETLRL+P + + ++ + + G + +GD+V
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLV 345
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERW 426
R+ + D +F P R+
Sbjct: 346 AASPAISNRIPEDF-PDPHDFVPARY 370
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 17/206 (8%)
Query: 222 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 280
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+S AL ++ L + ETLRL+P + + ++ + + G + +GD+V
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLV 345
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERW 426
R+ + D +F P R+
Sbjct: 346 AASPAISNRIPEDF-PDPHDFVPARY 370
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 17/206 (8%)
Query: 222 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 280
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+S AL ++ L + ETLRL+P + + ++ + + G + +GD+V
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLV 345
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERW 426
R+ + D +F P R+
Sbjct: 346 AASPAISNRIPEDF-PDPHDFVPARY 370
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 304 DTTAATLSWFIYMLCKHPAVQEKIVQEVK---EATGAKDISDFLKVAG---CISEEALEK 357
+T AT W ++ + ++P + +EVK E G K + + G C+S+ L
Sbjct: 272 NTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQK-----VSLEGNPICLSQAELND 325
Query: 358 MHYLHAAITETLRLYPAVPVDAKMCFSDDTL--PDG-FSVRKGDMVCYQAYAMGRMKFIW 414
+ L + I E+LRL A ++ + D TL DG +++RK D++ M I+
Sbjct: 326 LPVLDSIIKESLRLSSAS-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY 384
Query: 415 GDDAEEFKPERWLDENG 431
D FK +R+LDENG
Sbjct: 385 PDPLT-FKYDRYLDENG 400
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 304 DTTAATLSWFIYMLCKHPAVQEKIVQEVK---EATGAKDISDFLKVAG---CISEEALEK 357
+T AT W ++ + ++P + +EVK E G K + + G C+S+ L
Sbjct: 272 NTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQK-----VSLEGNPICLSQAELND 325
Query: 358 MHYLHAAITETLRLYPAVPVDAKMCFSDDTL--PDG-FSVRKGDMVCYQAYAMGRMKFIW 414
+ L + I E+LRL A ++ + D TL DG +++RK D++ M I+
Sbjct: 326 LPVLDSIIKESLRLSSAS-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY 384
Query: 415 GDDAEEFKPERWLDENG 431
D FK +R+LDENG
Sbjct: 385 PDPLT-FKYDRYLDENG 400
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 360
AG +TT+ TL + + +L KHP V ++ +E++ G + C+ + + +M Y
Sbjct: 276 AGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHR-------SPCMQDRS--RMPY 326
Query: 361 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKG-DMVCYQAYAMGRMKFIWGDDAE 419
A I E R +P + + D + + KG D++ + K + +
Sbjct: 327 TDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAF--PNPK 384
Query: 420 EFKPERWLDENGIFQK 435
F P +LDE+G F+K
Sbjct: 385 VFDPGHFLDESGNFKK 400
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 41/141 (29%)
Query: 296 LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEAL 355
+ ++AG +T A+ L+W +L P Q+++ + + A
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL-------------------- 255
Query: 356 EKMHYLHAAITETLRLYPAV-----PVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 410
AA E LRLYP ++ + +D LP G + + Y R+
Sbjct: 256 -------AAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTT------LVLSPYVTQRL 302
Query: 411 KFIWGDDAEEFKPERWLDENG 431
F D E F+PER+L+E G
Sbjct: 303 HF---PDGEAFRPERFLEERG 320
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 85 DPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRD 144
DP VE L + K ++ Y L L G G+ T GE W+E RK F K +R
Sbjct: 48 DPEGVEGALLA--EGTTKATFQYRALSRLTGRGLLTDWGESWKEARKALKDPFLPKNVRG 105
Query: 145 FSSA 148
+ A
Sbjct: 106 YREA 109
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 61/160 (38%), Gaps = 34/160 (21%)
Query: 241 LKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVI 300
++Q + D +++ I K+ Q D + ++ + E + R V + R + N +
Sbjct: 179 VEQLKQAADDYLWPFIEKRMAQPGD--DLFSRILSEPVGGRPWTVDE---ARRMCRNLLF 233
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 360
G DT AA + L +HP Q + E+
Sbjct: 234 GGLDTVAAMIGMVALHLARHPEDQRLL---------------------------RERPDL 266
Query: 361 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ AA E +R YP V V D DG ++RKGD+V
Sbjct: 267 IPAAADELMRRYPTVAVSRNAVADVDA--DGVTIRKGDLV 304
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 337 AKDISDFLKV-AGCISEEALEKMHYLHAAITETLRLYPAVPVD---AKMCFSDDTLPDGF 392
A++I +K G ++ A+EKM + + E LR P V AK ++ F
Sbjct: 322 AEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAF 381
Query: 393 SVRKGDMV-CYQAYAMGRMKFIWGDDAEEFKPERWLDENG 431
V+ G+M+ YQ A K D A+EF PER++ E G
Sbjct: 382 KVKAGEMLYGYQPLATRDPKIF--DRADEFVPERFVGEEG 419
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 337 AKDISDFLKV-AGCISEEALEKMHYLHAAITETLRLYPAVPVD---AKMCFSDDTLPDGF 392
A++I +K G ++ A+EKM + + E LR P V AK ++ F
Sbjct: 322 AEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAF 381
Query: 393 SVRKGDMV-CYQAYAMGRMKFIWGDDAEEFKPERWLDENG 431
V+ G+M+ YQ A K D A+EF PER++ E G
Sbjct: 382 KVKAGEMLYGYQPLATRDPKIF--DRADEFVPERFVGEEG 419
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 29/147 (19%)
Query: 288 PKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVA 347
P+ LRD +L + AG +TT + ++ L P Q +V++ E T A
Sbjct: 229 PEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPD-QLALVRK-GEVTWAD--------- 277
Query: 348 GCISEEALEKMHYLHAAITETLRLYPAVP-VDAKMCFSDDTLPDGFSVRKGDMVCYQAYA 406
+ ETLR PAV + + +D LPDG ++ +G+ + +YA
Sbjct: 278 ----------------VVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPIL-ASYA 320
Query: 407 MGRMKFIWGDDAEEFKPERWLDENGIF 433
W +DA+ F R + E+ F
Sbjct: 321 AANRHPDWHEDADTFDATRTVKEHLAF 347
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 41/141 (29%)
Query: 296 LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEAL 355
+ ++AG +T A+ L+W +L P Q+++ + + A
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL-------------------- 255
Query: 356 EKMHYLHAAITETLRLYPAVPV-----DAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 410
AA E LRLYP + + + +D LP +G + Y R+
Sbjct: 256 -------AAFQEALRLYPPAWILTRRLERPLLLGEDRLP------QGTTLVLSPYVTQRL 302
Query: 411 KFIWGDDAEEFKPERWLDENG 431
F + E F+PER+L E G
Sbjct: 303 YF---PEGEAFQPERFLAERG 320
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 57/307 (18%), Positives = 110/307 (35%), Gaps = 57/307 (18%)
Query: 110 LKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDK 169
++D + D + ++DG R R +++H F+ + R + F ++ + QL+ + D
Sbjct: 82 VRDFMVDFLQSLDGADHRRLRGLATHPFTPR--RITAVQPFVRSTVE--QLIDKLPQGD- 136
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKI 229
D F + G L+ + T + + + L DI K+
Sbjct: 137 -FDFVQHFAHPLPALVMCQLLGFPLE------DYDTVGRLSIETNLGLALSNDQDILVKV 189
Query: 230 KKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK 289
++ L + D V I ++K + D + + +L +
Sbjct: 190 EQGLG-----------RMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDY------- 231
Query: 290 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 349
LR ++ ++AG +TT L+ +Y +HP KI + + A
Sbjct: 232 ELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPELAP-------------- 277
Query: 350 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 409
A+ E LR P +PV A ++D +G + G V A+ R
Sbjct: 278 -------------QAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHR 324
Query: 410 MKFIWGD 416
++ D
Sbjct: 325 DPRVFAD 331
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 57/307 (18%), Positives = 110/307 (35%), Gaps = 57/307 (18%)
Query: 110 LKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDK 169
++D + D + ++DG R R +++H F+ + R + F ++ + QL+ + D
Sbjct: 92 VRDFMVDFLQSLDGADHRRLRGLATHPFTPR--RITAVQPFVRSTVE--QLIDKLPQGD- 146
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKI 229
D F + G L+ + T + + + L DI K+
Sbjct: 147 -FDFVQHFPHPLPALVMCQLLGFPLE------DYDTVGRLSIETNLGLALSNDQDILVKV 199
Query: 230 KKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK 289
++ L + D V I ++K + D + + +L +
Sbjct: 200 EQGLG-----------RMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDY------- 241
Query: 290 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 349
LR ++ ++AG +TT L+ +Y +HP KI + + A
Sbjct: 242 ELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPELAP-------------- 287
Query: 350 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 409
A+ E LR P +PV A ++D +G + G V A+ R
Sbjct: 288 -------------QAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHR 334
Query: 410 MKFIWGD 416
++ D
Sbjct: 335 DPRVFAD 341
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/223 (15%), Positives = 95/223 (42%), Gaps = 42/223 (18%)
Query: 111 KDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLA-QLLSEAANSDK 169
+++ G+ ++D + R++ F+ + + + R A ++A +L+ + A + +
Sbjct: 96 PEMVKGGLLSMDPPEHSRLRRLVVKAFTAR-----RAESLRPRAREIAHELVDQMAATGQ 150
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDI---- 225
D+ +F + + GV ++ TR+S AF + +T +
Sbjct: 151 PADLVAMFARQLPVRVICELLGVP----SADHDRFTRWSGAFLSTAEVTAEEMQEAAEQA 206
Query: 226 FWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQV 285
+ + L++ ++R E D V +++ + Q S+ ++++L
Sbjct: 207 YAYMGDLID-------RRRKEPTDDLVSALVQARDQQ--------DSLSEQELL------ 245
Query: 286 TDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+ + ++AG ++T ++ F+Y+L P ++ +++
Sbjct: 246 -------DLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL 281
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/223 (15%), Positives = 95/223 (42%), Gaps = 42/223 (18%)
Query: 111 KDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLA-QLLSEAANSDK 169
+++ G+ ++D + R++ F+ + + + R A ++A +L+ + A + +
Sbjct: 96 PEMVKGGLLSMDPPEHSRLRRLVVKAFTAR-----RAESLRPRAREIAHELVDQMAATGQ 150
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDI---- 225
D+ +F + + GV ++ TR+S AF + +T +
Sbjct: 151 PADLVAMFARQLPVRVICELLGVP----SADHDRFTRWSGAFLSTAEVTAEEMQEAAEQA 206
Query: 226 FWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQV 285
+ + L++ ++R E D V +++ + Q S+ ++++L
Sbjct: 207 YAYMGDLID-------RRRKEPTDDLVSALVQARDQQ--------DSLSEQELL------ 245
Query: 286 TDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+ + ++AG ++T ++ F+Y+L P ++ +++
Sbjct: 246 -------DLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL 281
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/309 (16%), Positives = 120/309 (38%), Gaps = 78/309 (25%)
Query: 111 KDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLA-QLLSEAANSDK 169
+++ G+ ++D + R++ F+ + + + R A ++A +L+ + A + +
Sbjct: 96 PEMVKGGLLSMDPPEHSRLRRLVVKAFTAR-----RAESLRPRAREIAHELVDQMAATGQ 150
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDI---- 225
D+ +F + + GV ++ TR+S AF + +T +
Sbjct: 151 PADLVAMFARQLPVRVICELLGVP----SADHDRFTRWSGAFLSTAEVTAEEMQEAAEQA 206
Query: 226 FWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQV 285
+ + L++ ++R E D V +++ + Q S+ ++++L
Sbjct: 207 YAYMGDLID-------RRRKEPTDDLVSALVQARDQQ--------DSLSEQELL------ 245
Query: 286 TDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLK 345
D+ + ++AG ++T ++ F+Y+L P ++ ++
Sbjct: 246 -------DLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQL------------------ 280
Query: 346 VAGCISEEALEKMHYLHAAITETLRLYP-----AVPVDAKMCFSDDTLPDGFSVRKGDMV 400
L++ + +A+ E R P AVP + D TL G ++R G+ V
Sbjct: 281 ---------LDRPELIPSAVEELTRWVPLGVGTAVP---RYAVEDVTL-RGVTIRAGEPV 327
Query: 401 CYQAYAMGR 409
A R
Sbjct: 328 LASTGAANR 336
>pdb|3OPB|A Chain A, Crystal Structure Of She4p
pdb|3OPB|B Chain B, Crystal Structure Of She4p
Length = 778
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/108 (19%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 42 PIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYG 101
P +F ++L+ + +H ++ + K T LL + ++ + +V Y+L
Sbjct: 103 PFALNLF-EILSRSSIHVFVGCFSNKDATIALLNELQIRIHYGEDTHVTYLLSIILQLLN 161
Query: 102 KGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAA 149
K YN+ ++ L+ + I + ++ + I E + +DF A
Sbjct: 162 KFKYNFKEVRFLVKELILRISEDEVKSMMLIIFAELQSSFQKDFDKAV 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,212,331
Number of Sequences: 62578
Number of extensions: 546749
Number of successful extensions: 1357
Number of sequences better than 100.0: 108
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1135
Number of HSP's gapped (non-prelim): 122
length of query: 466
length of database: 14,973,337
effective HSP length: 102
effective length of query: 364
effective length of database: 8,590,381
effective search space: 3126898684
effective search space used: 3126898684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)