Query 012331
Match_columns 466
No_of_seqs 424 out of 2742
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 07:20:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012331.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012331hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nva_A CTP synthase; rossman f 100.0 4E-179 1E-183 1411.8 29.7 445 1-461 3-450 (535)
2 1vco_A CTP synthetase; tetrame 100.0 1E-148 4E-153 1192.4 29.4 442 1-460 12-454 (550)
3 1s1m_A CTP synthase; CTP synth 100.0 4E-146 1E-150 1172.0 31.4 440 1-461 3-453 (545)
4 2c5m_A CTP synthase; cytidine 100.0 8E-145 3E-149 1051.6 20.8 272 1-272 23-294 (294)
5 2vo1_A CTP synthase 1; pyrimid 100.0 3E-143 1E-147 1047.7 19.0 273 1-273 23-295 (295)
6 1a9x_B Carbamoyl phosphate syn 100.0 1.6E-32 5.6E-37 283.1 4.7 214 180-433 53-298 (379)
7 2v4u_A CTP synthase 2; pyrimid 100.0 4.6E-29 1.6E-33 248.4 10.5 179 282-460 10-189 (289)
8 2w7t_A CTP synthetase, putativ 99.9 2.9E-26 1E-30 226.4 8.2 156 297-460 8-165 (273)
9 4gud_A Imidazole glycerol phos 99.5 2E-15 6.9E-20 141.7 5.1 92 299-419 4-100 (211)
10 3fij_A LIN1909 protein; 11172J 99.5 2.5E-13 8.6E-18 132.2 12.7 101 297-415 4-132 (254)
11 3r75_A Anthranilate/para-amino 99.4 2.1E-13 7.1E-18 149.3 9.5 98 298-420 447-550 (645)
12 1qdl_B Protein (anthranilate s 99.4 3.9E-13 1.3E-17 125.4 9.8 93 300-416 4-102 (195)
13 1wl8_A GMP synthase [glutamine 99.4 3.9E-13 1.3E-17 124.3 9.6 95 299-418 2-99 (189)
14 2a9v_A GMP synthase; structura 99.4 3.7E-13 1.3E-17 127.7 8.5 97 296-416 12-110 (212)
15 2ywj_A Glutamine amidotransfer 99.4 2.3E-13 7.9E-18 125.4 5.2 85 298-413 1-90 (186)
16 1i1q_B Anthranilate synthase c 99.4 1.8E-12 6E-17 120.5 10.3 98 298-415 1-100 (192)
17 1o1y_A Conserved hypothetical 99.3 1.9E-12 6.6E-17 124.9 9.6 103 295-417 10-119 (239)
18 2vpi_A GMP synthase; guanine m 99.3 4.8E-13 1.6E-17 127.7 3.0 97 298-418 25-123 (218)
19 1q7r_A Predicted amidotransfer 99.3 9.5E-13 3.3E-17 125.0 4.6 89 296-412 22-115 (219)
20 2iss_D Glutamine amidotransfer 99.3 1.8E-12 6E-17 122.1 4.8 89 295-411 18-111 (208)
21 2ywd_A Glutamine amidotransfer 99.3 2.4E-12 8.2E-17 118.6 5.2 85 298-410 3-93 (191)
22 3l7n_A Putative uncharacterize 99.3 1E-11 3.6E-16 119.2 9.5 99 298-416 1-109 (236)
23 3uow_A GMP synthetase; structu 99.3 1.2E-11 4.1E-16 133.3 10.8 94 298-415 8-107 (556)
24 1gpw_B Amidotransferase HISH; 99.3 2.5E-12 8.7E-17 119.8 4.7 82 298-409 1-95 (201)
25 2nv0_A Glutamine amidotransfer 99.2 2.6E-12 8.8E-17 119.3 4.4 87 298-412 2-93 (196)
26 3tqi_A GMP synthase [glutamine 99.2 9.5E-12 3.2E-16 133.2 6.6 95 298-416 11-107 (527)
27 1l9x_A Gamma-glutamyl hydrolas 99.2 3.2E-11 1.1E-15 121.2 9.9 101 297-414 30-147 (315)
28 3m3p_A Glutamine amido transfe 99.2 3.1E-11 1.1E-15 117.8 8.9 99 298-416 4-107 (250)
29 2abw_A PDX2 protein, glutamina 99.2 9.2E-12 3.1E-16 118.4 5.0 88 297-412 3-101 (227)
30 1gpm_A GMP synthetase, XMP ami 99.2 1.6E-11 5.6E-16 131.2 5.3 95 298-416 8-104 (525)
31 1ka9_H Imidazole glycerol phos 99.1 3E-11 1E-15 112.7 5.5 82 298-407 3-91 (200)
32 2ywb_A GMP synthase [glutamine 99.1 2.7E-11 9.2E-16 128.9 5.6 93 300-416 2-96 (503)
33 3d54_D Phosphoribosylformylgly 99.1 2E-10 6.7E-15 107.3 7.4 93 298-416 3-106 (213)
34 2vxo_A GMP synthase [glutamine 99.0 9.4E-11 3.2E-15 129.4 3.5 95 298-417 30-127 (697)
35 1jvn_A Glutamine, bifunctional 98.8 1E-09 3.6E-14 118.1 2.9 84 298-408 5-96 (555)
36 3l4e_A Uncharacterized peptida 98.6 5.2E-08 1.8E-12 92.4 5.8 92 297-405 27-127 (206)
37 1fy2_A Aspartyl dipeptidase; s 98.5 3E-08 1E-12 95.2 3.4 90 297-407 31-129 (229)
38 3ugj_A Phosphoribosylformylgly 98.5 9.2E-08 3.1E-12 111.6 7.1 91 296-406 1046-1151(1303)
39 2vdj_A Homoserine O-succinyltr 98.2 1.9E-06 6.5E-11 86.3 8.4 111 296-410 34-154 (301)
40 2h2w_A Homoserine O-succinyltr 98.2 2.9E-06 1E-10 85.4 9.7 111 296-410 46-166 (312)
41 1oi4_A Hypothetical protein YH 97.9 4.8E-05 1.6E-09 70.4 9.8 99 297-407 23-134 (193)
42 3l18_A Intracellular protease 97.6 0.00016 5.6E-09 64.7 9.2 100 297-406 2-110 (168)
43 3qxc_A Dethiobiotin synthetase 97.0 0.0039 1.3E-07 60.2 10.6 172 1-220 21-200 (242)
44 2rk3_A Protein DJ-1; parkinson 96.9 0.0013 4.5E-08 60.5 6.9 99 298-406 4-114 (197)
45 2vrn_A Protease I, DR1199; cys 96.9 0.0023 8E-08 58.2 8.5 100 297-406 9-123 (190)
46 4dzz_A Plasmid partitioning pr 96.8 0.0034 1.2E-07 56.6 8.5 97 1-165 1-97 (206)
47 2ab0_A YAJL; DJ-1/THIJ superfa 96.8 0.0017 6E-08 60.3 6.1 100 299-406 4-115 (205)
48 2fex_A Conserved hypothetical 96.7 0.0023 7.8E-08 58.4 6.5 45 362-406 63-109 (188)
49 4e08_A DJ-1 beta; flavodoxin-l 96.6 0.0047 1.6E-07 56.5 8.0 98 299-406 7-115 (190)
50 3er6_A Putative transcriptiona 96.6 0.0028 9.5E-08 59.3 6.6 49 358-406 70-123 (209)
51 3efe_A THIJ/PFPI family protei 96.6 0.0052 1.8E-07 57.5 8.3 45 362-406 74-120 (212)
52 3gra_A Transcriptional regulat 96.6 0.01 3.5E-07 55.2 10.1 46 360-406 69-116 (202)
53 3of5_A Dethiobiotin synthetase 96.6 0.007 2.4E-07 57.5 9.2 170 1-220 4-180 (228)
54 4hcj_A THIJ/PFPI domain protei 96.3 0.0035 1.2E-07 57.6 5.0 46 361-406 68-116 (177)
55 3noq_A THIJ/PFPI family protei 96.2 0.009 3.1E-07 56.9 7.2 101 298-406 6-112 (231)
56 3fgn_A Dethiobiotin synthetase 96.1 0.015 5.1E-07 56.4 8.5 168 1-219 26-196 (251)
57 3uk7_A Class I glutamine amido 96.0 0.017 5.7E-07 58.8 9.0 97 298-406 206-329 (396)
58 3mgk_A Intracellular protease/ 95.9 0.0059 2E-07 57.3 4.5 101 297-406 4-112 (211)
59 3en0_A Cyanophycinase; serine 95.8 0.017 5.7E-07 57.5 7.7 108 282-405 43-159 (291)
60 3ot1_A 4-methyl-5(B-hydroxyeth 95.8 0.014 4.8E-07 54.3 6.4 98 298-405 10-119 (208)
61 3l3b_A ES1 family protein; ssg 95.7 0.0076 2.6E-07 58.2 4.5 48 361-408 106-168 (242)
62 3uk7_A Class I glutamine amido 95.7 0.026 8.9E-07 57.4 8.7 98 298-407 13-137 (396)
63 1hyq_A MIND, cell division inh 95.7 0.088 3E-06 49.5 11.7 41 1-42 2-42 (263)
64 3fse_A Two-domain protein cont 95.7 0.018 6.1E-07 59.0 7.2 100 297-406 10-120 (365)
65 3cne_A Putative protease I; st 95.5 0.0097 3.3E-07 53.4 4.1 47 361-407 65-120 (175)
66 1xjc_A MOBB protein homolog; s 95.5 0.016 5.4E-07 53.1 5.5 44 1-46 4-48 (169)
67 2ph1_A Nucleotide-binding prot 95.4 0.14 4.9E-06 48.5 12.0 42 1-43 18-59 (262)
68 3f5d_A Protein YDEA; unknow pr 95.3 0.026 8.9E-07 52.8 6.6 45 362-406 63-108 (206)
69 1vhq_A Enhancing lycopene bios 95.1 0.013 4.4E-07 55.5 3.8 47 361-407 89-149 (232)
70 3ttv_A Catalase HPII; heme ori 95.1 0.023 7.9E-07 63.0 6.2 95 298-405 601-706 (753)
71 2xxa_A Signal recognition part 95.0 0.25 8.4E-06 51.4 13.4 40 2-43 101-141 (433)
72 3ewn_A THIJ/PFPI family protei 94.9 0.037 1.3E-06 53.6 6.6 101 298-406 24-132 (253)
73 2xj4_A MIPZ; replication, cell 94.8 0.2 6.9E-06 48.3 11.5 40 2-42 5-44 (286)
74 1u9c_A APC35852; structural ge 94.8 0.015 5.3E-07 54.2 3.3 45 361-405 88-136 (224)
75 3ej6_A Catalase-3; heme, hydro 94.5 0.18 6E-06 55.6 11.2 95 298-406 538-645 (688)
76 3dm5_A SRP54, signal recogniti 94.4 0.41 1.4E-05 50.2 13.4 40 2-43 101-140 (443)
77 3ea0_A ATPase, para family; al 94.2 0.089 3.1E-06 48.6 7.1 41 1-42 4-45 (245)
78 3kjh_A CO dehydrogenase/acetyl 94.1 0.13 4.5E-06 47.2 8.0 39 1-42 1-39 (254)
79 3kl4_A SRP54, signal recogniti 94.1 0.58 2E-05 48.8 13.7 39 2-42 98-136 (433)
80 3iqw_A Tail-anchored protein t 93.6 0.39 1.3E-05 48.2 11.0 40 2-43 17-56 (334)
81 1rw7_A YDR533CP; alpha-beta sa 93.6 0.024 8.2E-07 54.1 2.0 45 361-405 97-145 (243)
82 3n7t_A Macrophage binding prot 93.3 0.035 1.2E-06 53.6 2.7 46 361-406 104-153 (247)
83 1sy7_A Catalase 1; heme oxidat 93.2 0.12 3.9E-06 57.4 6.9 102 298-409 535-646 (715)
84 3kkl_A Probable chaperone prot 93.1 0.039 1.3E-06 53.1 2.6 47 361-407 97-147 (244)
85 3end_A Light-independent proto 92.9 0.15 5.2E-06 49.3 6.4 43 1-45 41-83 (307)
86 2obn_A Hypothetical protein; s 92.3 1.2 4E-05 45.3 12.3 152 1-222 152-312 (349)
87 2g0t_A Conserved hypothetical 92.2 0.37 1.3E-05 49.0 8.6 148 1-215 169-319 (350)
88 2iuf_A Catalase; oxidoreductas 91.8 0.41 1.4E-05 52.8 8.8 95 298-405 530-646 (688)
89 1n57_A Chaperone HSP31, protei 91.8 0.053 1.8E-06 53.4 1.7 48 360-407 143-194 (291)
90 2ffh_A Protein (FFH); SRP54, s 91.4 1.7 6E-05 45.0 12.7 40 2-43 99-138 (425)
91 3q9l_A Septum site-determining 91.3 0.28 9.5E-06 45.6 6.0 40 1-41 2-41 (260)
92 3bhn_A THIJ/PFPI domain protei 91.3 0.11 3.6E-06 49.8 3.2 101 297-406 20-127 (236)
93 1g3q_A MIND ATPase, cell divis 91.2 0.3 1E-05 44.9 6.0 41 1-42 2-42 (237)
94 3fkq_A NTRC-like two-domain pr 90.9 1.7 5.8E-05 43.6 11.8 44 1-45 143-186 (373)
95 1ihu_A Arsenical pump-driving 90.8 0.29 1E-05 52.2 6.3 42 3-45 328-369 (589)
96 4gdh_A DJ-1, uncharacterized p 90.6 0.26 9E-06 45.3 5.0 100 298-403 5-119 (194)
97 1np6_A Molybdopterin-guanine d 90.1 0.39 1.3E-05 43.7 5.7 44 1-46 6-50 (174)
98 3k9g_A PF-32 protein; ssgcid, 89.1 0.45 1.5E-05 44.8 5.4 42 1-44 27-68 (267)
99 3fwy_A Light-independent proto 88.9 0.57 2E-05 46.5 6.3 44 1-46 48-91 (314)
100 2afh_E Nitrogenase iron protei 88.3 0.63 2.1E-05 44.5 5.9 42 1-44 2-43 (289)
101 1cp2_A CP2, nitrogenase iron p 88.0 0.61 2.1E-05 43.8 5.6 42 1-44 1-42 (269)
102 3zq6_A Putative arsenical pump 87.1 0.52 1.8E-05 46.5 4.7 41 1-42 13-53 (324)
103 1wcv_1 SOJ, segregation protei 86.4 0.71 2.4E-05 43.4 5.0 43 1-44 6-48 (257)
104 1byi_A Dethiobiotin synthase; 86.1 0.89 3.1E-05 41.3 5.4 40 1-43 1-40 (224)
105 3ug7_A Arsenical pump-driving 84.4 1 3.4E-05 45.1 5.3 41 1-42 25-65 (349)
106 3pg5_A Uncharacterized protein 84.1 1.1 3.6E-05 45.0 5.3 46 1-47 1-46 (361)
107 1ls1_A Signal recognition part 84.0 7 0.00024 38.0 11.0 40 2-43 99-138 (295)
108 1nks_A Adenylate kinase; therm 82.2 1 3.4E-05 39.4 3.8 36 1-38 1-36 (194)
109 2oze_A ORF delta'; para, walke 81.9 1.3 4.3E-05 42.4 4.7 42 3-44 36-78 (298)
110 1z0s_A Probable inorganic poly 80.2 0.97 3.3E-05 44.5 3.2 72 297-400 29-100 (278)
111 3cio_A ETK, tyrosine-protein k 80.1 1.9 6.6E-05 42.0 5.4 155 1-219 104-276 (299)
112 1ihu_A Arsenical pump-driving 79.6 1.9 6.4E-05 45.9 5.4 39 2-42 9-47 (589)
113 3io3_A DEHA2D07832P; chaperone 79.4 1.8 6E-05 43.6 4.9 40 1-42 18-59 (348)
114 3bfv_A CAPA1, CAPB2, membrane 79.1 2.5 8.5E-05 40.6 5.7 156 1-220 82-255 (271)
115 2woo_A ATPase GET3; tail-ancho 78.8 1.6 5.6E-05 43.1 4.4 41 2-43 19-59 (329)
116 2woj_A ATPase GET3; tail-ancho 78.1 1.4 4.9E-05 44.2 3.8 42 2-44 18-61 (354)
117 3cwq_A Para family chromosome 77.0 2.5 8.5E-05 38.7 4.8 40 2-43 1-40 (209)
118 4b4o_A Epimerase family protei 75.7 2.9 9.8E-05 39.6 5.0 34 1-41 1-34 (298)
119 2z0h_A DTMP kinase, thymidylat 75.5 3.5 0.00012 36.2 5.3 33 2-36 1-33 (197)
120 3pfn_A NAD kinase; structural 73.1 5 0.00017 41.0 6.2 90 298-400 39-141 (365)
121 1gtv_A TMK, thymidylate kinase 72.6 1.5 5.1E-05 39.3 2.0 36 2-39 1-36 (214)
122 1zu4_A FTSY; GTPase, signal re 72.4 5.1 0.00017 39.7 6.1 39 2-42 106-144 (320)
123 2v3c_C SRP54, signal recogniti 71.9 2.2 7.6E-05 44.2 3.4 40 2-43 100-139 (432)
124 2f1r_A Molybdopterin-guanine d 71.7 2.9 0.0001 37.6 3.8 40 1-42 2-41 (171)
125 3guy_A Short-chain dehydrogena 70.8 2.2 7.6E-05 39.0 2.8 34 1-40 1-34 (230)
126 3la6_A Tyrosine-protein kinase 69.5 4.7 0.00016 39.1 5.0 40 2-42 93-132 (286)
127 1vma_A Cell division protein F 68.9 6.7 0.00023 38.7 6.0 40 2-43 105-144 (306)
128 2px0_A Flagellar biosynthesis 66.8 5.9 0.0002 38.7 5.1 39 2-42 106-145 (296)
129 4fyk_A Deoxyribonucleoside 5'- 66.6 12 0.00043 33.5 6.7 94 298-399 3-102 (152)
130 2pbr_A DTMP kinase, thymidylat 65.8 5.8 0.0002 34.5 4.4 33 2-36 1-33 (195)
131 1zmt_A Haloalcohol dehalogenas 64.1 5.1 0.00017 37.3 3.9 31 1-37 1-31 (254)
132 1eiw_A Hypothetical protein MT 63.9 4.9 0.00017 34.2 3.4 39 359-397 35-73 (111)
133 3ez2_A Plasmid partition prote 63.7 9 0.00031 38.4 5.9 43 1-44 108-156 (398)
134 1u0t_A Inorganic polyphosphate 63.6 5.9 0.0002 38.8 4.4 93 299-400 6-108 (307)
135 1j8m_F SRP54, signal recogniti 63.5 8.6 0.00029 37.5 5.5 40 2-43 99-138 (297)
136 1fjh_A 3alpha-hydroxysteroid d 63.5 5.4 0.00018 36.7 3.9 34 1-40 1-34 (257)
137 2oyn_A Hypothetical protein MJ 63.2 2.7 9.3E-05 37.7 1.7 31 2-32 5-39 (146)
138 2j37_W Signal recognition part 60.6 11 0.00037 39.9 6.0 40 2-43 102-141 (504)
139 1rz3_A Hypothetical protein rb 59.6 12 0.0004 33.6 5.4 41 2-44 23-63 (201)
140 3ez9_A Para; DNA binding, wing 59.5 7.6 0.00026 39.0 4.4 45 1-46 111-161 (403)
141 2an1_A Putative kinase; struct 59.5 11 0.00037 36.3 5.4 88 299-400 7-96 (292)
142 1nn5_A Similar to deoxythymidy 58.7 10 0.00034 33.7 4.7 34 2-37 10-43 (215)
143 3a4m_A L-seryl-tRNA(SEC) kinas 57.4 9.9 0.00034 35.8 4.6 40 1-42 4-43 (260)
144 1p3d_A UDP-N-acetylmuramate--a 56.7 11 0.00039 38.8 5.3 57 2-64 119-175 (475)
145 3igf_A ALL4481 protein; two-do 56.2 9.9 0.00034 38.6 4.7 39 1-42 2-40 (374)
146 1w78_A FOLC bifunctional prote 55.3 13 0.00043 37.8 5.3 32 2-37 50-81 (422)
147 4edh_A DTMP kinase, thymidylat 54.6 15 0.00051 34.0 5.2 35 2-38 7-41 (213)
148 3l77_A Short-chain alcohol deh 54.1 8.9 0.0003 34.9 3.6 33 1-39 2-34 (235)
149 2f00_A UDP-N-acetylmuramate--L 54.1 13 0.00046 38.5 5.3 57 2-64 120-176 (491)
150 1jbw_A Folylpolyglutamate synt 53.6 12 0.00042 37.9 4.9 32 2-37 40-71 (428)
151 2i2c_A Probable inorganic poly 52.8 5 0.00017 38.6 1.7 35 362-401 35-71 (272)
152 3l6e_A Oxidoreductase, short-c 52.4 9.7 0.00033 35.1 3.6 33 1-39 3-35 (235)
153 3h2s_A Putative NADH-flavin re 52.2 15 0.0005 32.7 4.7 34 1-41 1-34 (224)
154 3llv_A Exopolyphosphatase-rela 52.2 11 0.00036 31.6 3.5 33 2-41 7-39 (141)
155 2ph3_A 3-oxoacyl-[acyl carrier 52.1 8.2 0.00028 35.0 3.0 31 1-37 1-31 (245)
156 1kht_A Adenylate kinase; phosp 52.1 13 0.00046 32.0 4.3 34 2-37 4-37 (192)
157 3nrs_A Dihydrofolate:folylpoly 51.9 12 0.00041 38.4 4.5 32 2-37 53-84 (437)
158 3kts_A Glycerol uptake operon 51.5 15 0.00052 34.1 4.7 79 112-217 11-89 (192)
159 1zmo_A Halohydrin dehalogenase 51.4 11 0.00039 34.6 3.9 31 1-37 1-31 (244)
160 2yvu_A Probable adenylyl-sulfa 51.3 15 0.00052 32.1 4.6 39 2-42 14-52 (186)
161 3ew7_A LMO0794 protein; Q8Y8U8 51.2 18 0.0006 31.9 5.0 34 1-41 1-34 (221)
162 4hf7_A Putative acylhydrolase; 51.1 22 0.00075 31.7 5.7 62 118-187 63-131 (209)
163 1j6u_A UDP-N-acetylmuramate-al 50.9 20 0.00069 37.0 6.1 38 2-44 115-152 (469)
164 3ff4_A Uncharacterized protein 50.6 15 0.00053 31.3 4.3 38 362-405 82-119 (122)
165 4e4y_A Short chain dehydrogena 50.1 8 0.00028 35.6 2.6 35 1-40 4-38 (244)
166 2wwf_A Thymidilate kinase, put 50.1 18 0.00061 32.0 4.9 34 2-37 11-44 (212)
167 1o5z_A Folylpolyglutamate synt 49.4 15 0.00052 37.6 4.8 32 2-37 53-84 (442)
168 3orf_A Dihydropteridine reduct 48.6 13 0.00045 34.4 3.9 34 2-41 23-56 (251)
169 3i1j_A Oxidoreductase, short c 48.3 11 0.00038 34.4 3.3 32 2-39 15-46 (247)
170 3uce_A Dehydrogenase; rossmann 48.3 8.5 0.00029 34.9 2.4 33 2-40 7-39 (223)
171 3hp4_A GDSL-esterase; psychrot 48.2 29 0.00098 29.7 5.8 75 91-175 21-104 (185)
172 1g5t_A COB(I)alamin adenosyltr 48.1 10 0.00035 35.3 2.9 29 13-41 36-66 (196)
173 3ksm_A ABC-type sugar transpor 47.9 46 0.0016 30.1 7.4 33 361-397 57-90 (276)
174 3i4f_A 3-oxoacyl-[acyl-carrier 47.7 12 0.00039 34.7 3.3 31 1-37 7-37 (264)
175 2jah_A Clavulanic acid dehydro 47.6 12 0.00042 34.6 3.4 32 2-39 8-39 (247)
176 8abp_A L-arabinose-binding pro 47.4 1.2E+02 0.0042 27.8 10.4 80 297-397 2-88 (306)
177 3o26_A Salutaridine reductase; 47.0 12 0.0004 35.1 3.3 32 2-39 13-44 (311)
178 3kb2_A SPBC2 prophage-derived 47.0 14 0.00049 31.3 3.6 25 1-27 1-25 (173)
179 1t0b_A THUA-like protein; treh 46.6 79 0.0027 30.0 9.1 86 297-400 7-106 (252)
180 3h7a_A Short chain dehydrogena 46.3 14 0.00049 34.3 3.7 32 2-39 8-39 (252)
181 4e5v_A Putative THUA-like prot 46.3 1.1E+02 0.0039 29.5 10.3 90 296-401 3-96 (281)
182 3ged_A Short-chain dehydrogena 46.2 13 0.00044 35.5 3.4 32 2-39 3-34 (247)
183 3e03_A Short chain dehydrogena 46.1 14 0.00049 34.7 3.7 31 2-38 7-37 (274)
184 4a0g_A Adenosylmethionine-8-am 46.0 17 0.00057 40.7 4.8 36 2-38 35-75 (831)
185 3vtz_A Glucose 1-dehydrogenase 45.9 14 0.00048 34.8 3.6 33 2-40 15-47 (269)
186 3asu_A Short-chain dehydrogena 45.5 17 0.00058 33.7 4.1 31 2-38 1-31 (248)
187 3rwb_A TPLDH, pyridoxal 4-dehy 45.3 13 0.00044 34.5 3.2 30 2-37 7-36 (247)
188 2hq1_A Glucose/ribitol dehydro 45.1 14 0.00046 33.7 3.3 30 2-37 6-35 (247)
189 3tpc_A Short chain alcohol deh 45.1 16 0.00053 33.9 3.7 32 2-39 8-39 (257)
190 2ekp_A 2-deoxy-D-gluconate 3-d 44.9 16 0.00054 33.4 3.7 33 2-40 3-35 (239)
191 3gvc_A Oxidoreductase, probabl 44.7 16 0.00053 34.7 3.8 31 2-38 30-60 (277)
192 3p19_A BFPVVD8, putative blue 44.6 14 0.00046 34.9 3.3 32 2-39 17-48 (266)
193 2pjk_A 178AA long hypothetical 44.5 28 0.00097 31.4 5.3 47 111-166 59-106 (178)
194 2d1y_A Hypothetical protein TT 44.2 16 0.00055 33.8 3.7 32 2-39 7-38 (256)
195 3t4x_A Oxidoreductase, short c 44.1 14 0.00046 34.7 3.2 32 2-39 11-42 (267)
196 3lyl_A 3-oxoacyl-(acyl-carrier 44.0 14 0.00049 33.7 3.3 31 2-38 6-36 (247)
197 3lf2_A Short chain oxidoreduct 44.0 15 0.0005 34.4 3.4 32 2-39 9-40 (265)
198 3zv4_A CIS-2,3-dihydrobiphenyl 43.9 15 0.0005 34.8 3.4 30 2-37 6-35 (281)
199 3nyw_A Putative oxidoreductase 43.9 13 0.00044 34.6 3.0 32 2-39 8-39 (250)
200 2dtx_A Glucose 1-dehydrogenase 43.7 17 0.00057 34.1 3.8 34 2-41 9-42 (264)
201 2fwm_X 2,3-dihydro-2,3-dihydro 43.6 17 0.00058 33.6 3.7 33 2-40 8-40 (250)
202 3pxx_A Carveol dehydrogenase; 43.6 15 0.00051 34.4 3.4 33 2-40 11-43 (287)
203 4dmm_A 3-oxoacyl-[acyl-carrier 43.5 14 0.00047 34.8 3.2 30 2-37 29-58 (269)
204 3bos_A Putative DNA replicatio 43.3 40 0.0014 29.8 6.1 59 3-63 54-112 (242)
205 3ezl_A Acetoacetyl-COA reducta 43.3 14 0.0005 33.9 3.2 29 2-36 14-42 (256)
206 2vos_A Folylpolyglutamate synt 43.0 22 0.00076 37.0 4.9 31 2-36 65-95 (487)
207 2gk3_A Putative cytoplasmic pr 43.0 16 0.00054 34.8 3.5 70 314-397 43-124 (256)
208 4f67_A UPF0176 protein LPG2838 42.9 16 0.00053 35.5 3.5 61 2-71 183-247 (265)
209 2p67_A LAO/AO transport system 42.8 1.1E+02 0.0037 29.9 9.7 40 2-43 57-96 (341)
210 2cfc_A 2-(R)-hydroxypropyl-COM 42.5 17 0.00058 33.0 3.5 31 2-38 3-33 (250)
211 1ooe_A Dihydropteridine reduct 42.5 19 0.00063 32.8 3.8 34 2-41 4-37 (236)
212 4eso_A Putative oxidoreductase 42.2 16 0.00056 34.0 3.4 32 2-39 9-40 (255)
213 2dkn_A 3-alpha-hydroxysteroid 42.2 26 0.0009 31.6 4.8 34 1-40 1-34 (255)
214 3lv8_A DTMP kinase, thymidylat 42.2 26 0.00089 33.1 4.8 35 2-38 28-63 (236)
215 3ai3_A NADPH-sorbose reductase 42.1 17 0.00057 33.8 3.4 31 2-38 8-38 (263)
216 4b79_A PA4098, probable short- 42.0 18 0.00062 34.5 3.7 33 2-40 12-44 (242)
217 2ew8_A (S)-1-phenylethanol deh 41.9 19 0.00063 33.3 3.7 32 2-39 8-39 (249)
218 3m1a_A Putative dehydrogenase; 41.8 18 0.00061 33.9 3.6 31 2-38 6-36 (281)
219 3gbv_A Putative LACI-family tr 41.8 1E+02 0.0035 28.1 8.9 33 361-397 68-100 (304)
220 3a28_C L-2.3-butanediol dehydr 41.8 16 0.00054 33.9 3.2 31 2-38 3-33 (258)
221 3l49_A ABC sugar (ribose) tran 41.7 2E+02 0.0069 26.0 11.2 82 296-397 4-92 (291)
222 3tfo_A Putative 3-oxoacyl-(acy 41.7 16 0.00054 34.5 3.3 33 2-40 5-37 (264)
223 4e3z_A Putative oxidoreductase 41.6 16 0.00054 34.1 3.2 29 2-36 27-55 (272)
224 3op4_A 3-oxoacyl-[acyl-carrier 41.6 16 0.00056 33.7 3.3 31 2-38 10-40 (248)
225 3oid_A Enoyl-[acyl-carrier-pro 41.6 16 0.00055 34.1 3.3 29 2-36 5-33 (258)
226 4iiu_A 3-oxoacyl-[acyl-carrier 41.6 15 0.00053 34.1 3.1 29 2-36 27-55 (267)
227 1wma_A Carbonyl reductase [NAD 41.5 19 0.00064 32.9 3.7 34 1-40 4-38 (276)
228 1uuy_A CNX1, molybdopterin bio 41.4 52 0.0018 29.1 6.5 47 111-166 49-96 (167)
229 3tl3_A Short-chain type dehydr 41.4 15 0.0005 34.1 2.9 30 2-37 10-39 (257)
230 1vl8_A Gluconate 5-dehydrogena 41.3 17 0.00058 34.1 3.4 31 2-38 22-52 (267)
231 3f1l_A Uncharacterized oxidore 41.2 17 0.00059 33.6 3.4 31 2-38 13-43 (252)
232 3ek2_A Enoyl-(acyl-carrier-pro 41.2 21 0.00072 32.9 4.0 31 2-37 15-46 (271)
233 1mxh_A Pteridine reductase 2; 41.0 16 0.00055 34.1 3.2 30 2-37 12-41 (276)
234 2rhc_B Actinorhodin polyketide 40.9 17 0.00059 34.2 3.4 32 2-39 23-54 (277)
235 3ppi_A 3-hydroxyacyl-COA dehyd 40.9 19 0.00066 33.6 3.7 32 2-39 31-62 (281)
236 3ioy_A Short-chain dehydrogena 40.9 20 0.00069 34.7 4.0 32 2-39 9-40 (319)
237 3rht_A (gatase1)-like protein; 40.8 1E+02 0.0034 29.6 8.8 81 298-397 5-85 (259)
238 1xx6_A Thymidine kinase; NESG, 40.8 28 0.00097 31.7 4.7 33 2-38 9-43 (191)
239 3pk0_A Short-chain dehydrogena 40.7 16 0.00056 34.0 3.2 32 2-39 11-42 (262)
240 3tzq_B Short-chain type dehydr 40.7 20 0.00067 33.7 3.7 32 2-39 12-43 (271)
241 3qiv_A Short-chain dehydrogena 40.7 18 0.00061 33.2 3.4 31 2-38 10-40 (253)
242 1iy8_A Levodione reductase; ox 40.6 18 0.00061 33.7 3.4 31 2-38 14-44 (267)
243 4imr_A 3-oxoacyl-(acyl-carrier 40.6 18 0.00062 34.2 3.5 30 2-37 34-63 (275)
244 3p32_A Probable GTPase RV1496/ 40.6 37 0.0013 33.5 5.9 41 3-45 81-121 (355)
245 2uvd_A 3-oxoacyl-(acyl-carrier 40.5 17 0.00057 33.4 3.2 30 2-37 5-34 (246)
246 2o23_A HADH2 protein; HSD17B10 40.4 20 0.0007 32.8 3.7 32 2-39 13-44 (265)
247 4tmk_A Protein (thymidylate ki 40.3 29 0.001 32.0 4.8 33 2-36 4-37 (213)
248 2wsb_A Galactitol dehydrogenas 40.3 18 0.00063 32.9 3.4 31 2-38 12-42 (254)
249 2nwq_A Probable short-chain de 40.2 23 0.00079 33.4 4.2 33 2-40 22-54 (272)
250 3tsc_A Putative oxidoreductase 40.2 18 0.00062 33.9 3.4 32 2-39 12-43 (277)
251 3s55_A Putative short-chain de 40.2 18 0.00061 34.0 3.4 33 2-40 11-43 (281)
252 2ae2_A Protein (tropinone redu 40.2 19 0.00063 33.4 3.4 32 2-39 10-41 (260)
253 3rkr_A Short chain oxidoreduct 40.1 18 0.0006 33.7 3.3 31 2-38 30-60 (262)
254 1h5q_A NADP-dependent mannitol 40.1 19 0.00064 33.0 3.4 30 2-37 15-44 (265)
255 3rd5_A Mypaa.01249.C; ssgcid, 40.0 19 0.00063 34.1 3.5 33 2-40 17-49 (291)
256 3o38_A Short chain dehydrogena 39.9 23 0.00078 32.8 4.0 33 2-39 23-55 (266)
257 3uve_A Carveol dehydrogenase ( 39.9 18 0.00063 34.0 3.4 33 2-40 12-44 (286)
258 4dqx_A Probable oxidoreductase 39.8 18 0.00063 34.2 3.4 31 2-38 28-58 (277)
259 1e7w_A Pteridine reductase; di 39.8 17 0.00058 34.6 3.2 31 2-38 10-40 (291)
260 1spx_A Short-chain reductase f 39.8 17 0.00059 33.9 3.2 32 2-39 7-38 (278)
261 1edo_A Beta-keto acyl carrier 39.7 18 0.00061 32.8 3.2 29 2-36 2-30 (244)
262 3r1i_A Short-chain type dehydr 39.6 21 0.0007 33.8 3.7 30 2-37 33-62 (276)
263 3sx2_A Putative 3-ketoacyl-(ac 39.5 19 0.00064 33.7 3.4 32 2-39 14-45 (278)
264 3t7c_A Carveol dehydrogenase; 39.5 19 0.00063 34.4 3.4 34 2-41 29-62 (299)
265 3tjr_A Short chain dehydrogena 39.4 19 0.00063 34.5 3.4 30 2-37 32-61 (301)
266 3m9w_A D-xylose-binding peripl 39.4 1.5E+02 0.0052 27.4 9.8 82 298-397 3-89 (313)
267 2qq5_A DHRS1, dehydrogenase/re 39.3 18 0.00063 33.4 3.3 31 2-38 6-36 (260)
268 3un1_A Probable oxidoreductase 39.3 21 0.0007 33.4 3.6 33 2-40 29-61 (260)
269 3gem_A Short chain dehydrogena 39.2 16 0.00055 34.2 2.9 33 2-40 28-60 (260)
270 3icc_A Putative 3-oxoacyl-(acy 39.2 18 0.00062 33.0 3.2 29 2-36 8-36 (255)
271 1vi6_A 30S ribosomal protein S 38.9 1.1E+02 0.0038 28.6 8.5 77 298-398 69-145 (208)
272 2q2v_A Beta-D-hydroxybutyrate 38.9 20 0.00068 33.1 3.4 30 2-37 5-34 (255)
273 3v2g_A 3-oxoacyl-[acyl-carrier 38.8 19 0.00066 33.9 3.4 30 2-37 32-61 (271)
274 1o5i_A 3-oxoacyl-(acyl carrier 38.8 20 0.00069 33.1 3.4 34 2-41 20-53 (249)
275 3ak4_A NADH-dependent quinucli 38.7 20 0.00068 33.2 3.4 31 2-38 13-43 (263)
276 1geg_A Acetoin reductase; SDR 38.7 20 0.00068 33.1 3.4 31 2-38 3-33 (256)
277 2z1n_A Dehydrogenase; reductas 38.2 21 0.0007 33.1 3.4 31 2-38 8-38 (260)
278 1yde_A Retinal dehydrogenase/r 37.9 21 0.00071 33.6 3.4 32 2-39 10-41 (270)
279 3rot_A ABC sugar transporter, 37.9 2E+02 0.0068 26.4 10.3 83 297-397 3-92 (297)
280 1vjn_A Zn-dependent hydrolase 37.8 39 0.0013 31.0 5.2 71 139-219 138-208 (220)
281 3ijr_A Oxidoreductase, short c 37.7 23 0.00078 33.7 3.7 32 2-39 48-79 (291)
282 2ptg_A Enoyl-acyl carrier redu 37.7 25 0.00086 33.7 4.1 33 2-39 10-43 (319)
283 4e6p_A Probable sorbitol dehyd 37.6 21 0.00073 33.0 3.4 31 2-38 9-39 (259)
284 3uf0_A Short-chain dehydrogena 37.5 21 0.00071 33.7 3.4 30 2-37 32-61 (273)
285 3ftp_A 3-oxoacyl-[acyl-carrier 37.5 20 0.00067 33.8 3.2 30 2-37 29-58 (270)
286 2r8r_A Sensor protein; KDPD, P 37.4 28 0.00096 33.1 4.2 32 11-42 14-45 (228)
287 1xu9_A Corticosteroid 11-beta- 37.4 20 0.0007 33.6 3.3 32 2-39 29-60 (286)
288 3dqp_A Oxidoreductase YLBE; al 37.3 29 0.00099 30.9 4.2 34 1-41 1-34 (219)
289 3svt_A Short-chain type dehydr 37.3 21 0.00073 33.5 3.4 32 2-39 12-43 (281)
290 2x9g_A PTR1, pteridine reducta 37.1 19 0.00066 33.9 3.1 32 2-39 24-55 (288)
291 3sc4_A Short chain dehydrogena 37.0 22 0.00075 33.7 3.4 33 2-40 10-42 (285)
292 1uls_A Putative 3-oxoacyl-acyl 36.8 22 0.00077 32.7 3.4 32 2-39 6-37 (245)
293 3is3_A 17BETA-hydroxysteroid d 36.8 21 0.00072 33.4 3.2 29 2-36 19-47 (270)
294 1e8c_A UDP-N-acetylmuramoylala 36.7 38 0.0013 35.1 5.5 33 2-38 109-141 (498)
295 3edm_A Short chain dehydrogena 36.6 22 0.00076 33.1 3.4 30 2-37 9-38 (259)
296 2h7i_A Enoyl-[acyl-carrier-pro 36.6 31 0.001 32.1 4.4 32 2-38 8-40 (269)
297 3rih_A Short chain dehydrogena 36.6 22 0.00076 34.1 3.5 33 2-40 42-74 (293)
298 3osu_A 3-oxoacyl-[acyl-carrier 36.6 21 0.00072 32.8 3.2 29 2-36 5-33 (246)
299 4dry_A 3-oxoacyl-[acyl-carrier 36.4 21 0.00071 33.9 3.2 31 2-38 34-64 (281)
300 3v2h_A D-beta-hydroxybutyrate 36.4 22 0.00076 33.6 3.4 30 2-37 26-55 (281)
301 1yo6_A Putative carbonyl reduc 36.3 23 0.00078 31.9 3.3 33 2-40 4-38 (250)
302 4iin_A 3-ketoacyl-acyl carrier 36.3 21 0.00072 33.3 3.2 30 2-37 30-59 (271)
303 2plr_A DTMP kinase, probable t 36.1 36 0.0012 29.7 4.6 30 2-34 5-34 (213)
304 2zat_A Dehydrogenase/reductase 36.1 22 0.00077 32.8 3.3 31 2-38 15-45 (260)
305 2a6a_A Hypothetical protein TM 36.0 23 0.0008 33.2 3.4 61 361-422 65-129 (218)
306 1x1t_A D(-)-3-hydroxybutyrate 36.0 23 0.00079 32.8 3.3 30 2-37 5-34 (260)
307 3ksu_A 3-oxoacyl-acyl carrier 35.9 18 0.00061 33.9 2.6 30 2-37 12-41 (262)
308 1uay_A Type II 3-hydroxyacyl-C 35.9 25 0.00085 31.6 3.5 34 2-41 3-36 (242)
309 1yb1_A 17-beta-hydroxysteroid 35.9 23 0.0008 33.0 3.4 32 2-39 32-63 (272)
310 3v8b_A Putative dehydrogenase, 35.8 23 0.0008 33.5 3.4 31 2-38 29-59 (283)
311 4fn4_A Short chain dehydrogena 35.7 23 0.00079 33.8 3.4 32 2-39 8-39 (254)
312 3uxy_A Short-chain dehydrogena 35.7 21 0.00071 33.6 3.0 30 2-37 29-58 (266)
313 1ae1_A Tropinone reductase-I; 35.6 24 0.00082 33.1 3.4 32 2-39 22-53 (273)
314 3pzy_A MOG; ssgcid, seattle st 35.5 35 0.0012 30.4 4.4 45 111-166 46-91 (164)
315 3dii_A Short-chain dehydrogena 35.4 25 0.00085 32.4 3.5 32 2-39 3-34 (247)
316 4g81_D Putative hexonate dehyd 35.3 19 0.00064 34.5 2.7 30 2-37 10-39 (255)
317 1hdc_A 3-alpha, 20 beta-hydrox 35.3 23 0.0008 32.7 3.3 31 2-38 6-36 (254)
318 3v9p_A DTMP kinase, thymidylat 35.3 32 0.0011 32.3 4.2 35 2-38 26-64 (227)
319 3gk3_A Acetoacetyl-COA reducta 35.3 20 0.0007 33.4 2.9 29 2-36 26-54 (269)
320 3ucx_A Short chain dehydrogena 35.3 29 0.001 32.2 4.0 31 2-38 12-42 (264)
321 3qlj_A Short chain dehydrogena 35.0 22 0.00075 34.3 3.1 31 2-38 28-58 (322)
322 3dhn_A NAD-dependent epimerase 35.0 40 0.0014 29.9 4.7 35 1-41 4-38 (227)
323 3lkv_A Uncharacterized conserv 34.9 1E+02 0.0034 29.2 7.8 67 295-370 6-77 (302)
324 2x5o_A UDP-N-acetylmuramoylala 34.9 34 0.0012 34.8 4.7 32 2-37 105-136 (439)
325 4gkb_A 3-oxoacyl-[acyl-carrier 34.8 27 0.00093 33.2 3.7 30 2-37 8-37 (258)
326 4ibo_A Gluconate dehydrogenase 34.8 20 0.00067 33.9 2.7 30 2-37 27-56 (271)
327 1e6c_A Shikimate kinase; phosp 34.8 24 0.00083 30.0 3.1 25 1-27 2-26 (173)
328 1zem_A Xylitol dehydrogenase; 34.7 25 0.00086 32.6 3.4 31 2-38 8-38 (262)
329 2o2s_A Enoyl-acyl carrier redu 34.6 28 0.00095 33.4 3.8 33 2-39 10-43 (315)
330 3l6u_A ABC-type sugar transpor 34.6 2.6E+02 0.0089 25.3 10.7 82 296-397 7-95 (293)
331 3ko8_A NAD-dependent epimerase 34.6 40 0.0014 31.5 4.8 31 4-40 3-33 (312)
332 4hp8_A 2-deoxy-D-gluconate 3-d 34.5 26 0.00089 33.5 3.5 30 2-37 10-39 (247)
333 1gee_A Glucose 1-dehydrogenase 34.4 24 0.00083 32.3 3.2 30 2-37 8-37 (261)
334 1gz6_A Estradiol 17 beta-dehyd 34.4 21 0.00073 34.7 2.9 30 2-37 10-39 (319)
335 1sby_A Alcohol dehydrogenase; 34.3 28 0.00094 32.0 3.6 31 2-38 6-37 (254)
336 3n74_A 3-ketoacyl-(acyl-carrie 34.2 27 0.00091 32.1 3.5 32 2-39 10-41 (261)
337 3cxt_A Dehydrogenase with diff 34.2 26 0.00087 33.5 3.4 31 2-38 35-65 (291)
338 4eyg_A Twin-arginine transloca 34.0 2.6E+02 0.0088 26.2 10.6 91 295-398 4-103 (368)
339 2pez_A Bifunctional 3'-phospho 34.0 55 0.0019 28.2 5.4 32 2-35 6-37 (179)
340 3ld9_A DTMP kinase, thymidylat 33.9 44 0.0015 31.3 4.9 33 2-36 22-55 (223)
341 3h75_A Periplasmic sugar-bindi 33.9 76 0.0026 30.2 6.8 32 362-398 62-93 (350)
342 3g1w_A Sugar ABC transporter; 33.9 1.4E+02 0.0048 27.4 8.5 33 361-397 60-92 (305)
343 4fc7_A Peroxisomal 2,4-dienoyl 33.9 23 0.0008 33.2 3.1 30 2-37 28-57 (277)
344 2c07_A 3-oxoacyl-(acyl-carrier 33.9 20 0.00068 33.8 2.6 31 2-38 45-75 (285)
345 1hxh_A 3BETA/17BETA-hydroxyste 33.8 23 0.00079 32.7 3.0 30 2-37 7-36 (253)
346 2b4q_A Rhamnolipids biosynthes 33.8 24 0.00083 33.2 3.2 30 2-37 30-59 (276)
347 1orr_A CDP-tyvelose-2-epimeras 33.8 35 0.0012 32.3 4.3 31 1-37 1-31 (347)
348 1zk4_A R-specific alcohol dehy 33.8 25 0.00085 31.9 3.2 32 2-39 7-38 (251)
349 1yxm_A Pecra, peroxisomal tran 33.7 26 0.0009 33.0 3.4 31 2-38 19-49 (303)
350 1xq1_A Putative tropinone redu 33.7 25 0.00085 32.4 3.2 33 2-40 15-47 (266)
351 3imf_A Short chain dehydrogena 33.7 25 0.00087 32.6 3.2 31 2-38 7-37 (257)
352 1ja9_A 4HNR, 1,3,6,8-tetrahydr 33.6 25 0.00085 32.3 3.1 30 2-37 22-51 (274)
353 4ag6_A VIRB4 ATPase, type IV s 33.6 44 0.0015 33.1 5.2 50 3-56 37-102 (392)
354 2pd4_A Enoyl-[acyl-carrier-pro 33.5 34 0.0012 32.0 4.1 32 2-38 7-39 (275)
355 3oec_A Carveol dehydrogenase ( 33.5 25 0.00086 33.9 3.3 31 2-38 47-77 (317)
356 3u5t_A 3-oxoacyl-[acyl-carrier 33.4 23 0.0008 33.3 3.0 29 2-36 28-56 (267)
357 1fmc_A 7 alpha-hydroxysteroid 33.4 23 0.00079 32.2 2.8 31 2-38 12-42 (255)
358 3sju_A Keto reductase; short-c 33.3 27 0.00092 32.9 3.4 31 2-38 25-55 (279)
359 4egf_A L-xylulose reductase; s 33.3 25 0.00086 32.8 3.2 32 2-39 21-52 (266)
360 3ctm_A Carbonyl reductase; alc 33.3 30 0.001 32.2 3.7 31 2-38 35-65 (279)
361 1g0o_A Trihydroxynaphthalene r 33.3 28 0.00096 32.7 3.5 30 2-37 30-59 (283)
362 3grp_A 3-oxoacyl-(acyl carrier 33.1 26 0.0009 32.9 3.3 31 2-38 28-58 (266)
363 3jy6_A Transcriptional regulat 33.1 2.7E+02 0.0093 25.0 10.6 31 361-398 62-92 (276)
364 2qhx_A Pteridine reductase 1; 32.9 25 0.00086 34.2 3.2 31 2-38 47-77 (328)
365 1sny_A Sniffer CG10964-PA; alp 32.8 27 0.00094 32.0 3.3 34 1-40 21-57 (267)
366 2p91_A Enoyl-[acyl-carrier-pro 32.8 37 0.0013 31.8 4.3 32 2-38 22-54 (285)
367 3u9l_A 3-oxoacyl-[acyl-carrier 32.7 29 0.00099 33.8 3.6 30 2-37 6-35 (324)
368 2bgk_A Rhizome secoisolaricire 32.6 29 0.00098 32.0 3.4 31 2-38 17-47 (278)
369 1qsg_A Enoyl-[acyl-carrier-pro 32.5 39 0.0013 31.3 4.3 32 2-38 10-42 (265)
370 2v54_A DTMP kinase, thymidylat 32.4 26 0.0009 30.7 3.0 31 2-36 5-35 (204)
371 4h15_A Short chain alcohol deh 32.4 28 0.00095 33.2 3.3 31 2-38 12-42 (261)
372 2rgy_A Transcriptional regulat 32.2 2.9E+02 0.01 25.1 10.5 32 361-398 66-97 (290)
373 2nm0_A Probable 3-oxacyl-(acyl 32.2 33 0.0011 31.9 3.7 33 2-40 22-54 (253)
374 3bch_A 40S ribosomal protein S 31.8 1.5E+02 0.005 28.7 8.3 77 298-398 105-181 (253)
375 1xkq_A Short-chain reductase f 31.7 28 0.00095 32.7 3.2 31 2-38 7-37 (280)
376 4da9_A Short-chain dehydrogena 31.7 29 0.001 32.7 3.4 30 2-37 30-59 (280)
377 1uj2_A Uridine-cytidine kinase 31.4 41 0.0014 31.1 4.3 24 2-27 23-46 (252)
378 2wtz_A UDP-N-acetylmuramoyl-L- 31.4 49 0.0017 34.8 5.3 33 2-38 147-179 (535)
379 4fgs_A Probable dehydrogenase 31.3 30 0.001 33.4 3.4 31 2-38 30-60 (273)
380 1xhl_A Short-chain dehydrogena 31.3 28 0.00096 33.2 3.2 32 2-39 27-58 (297)
381 1m7g_A Adenylylsulfate kinase; 31.2 39 0.0013 30.2 4.0 35 2-38 26-61 (211)
382 3tox_A Short chain dehydrogena 31.1 26 0.00088 33.3 2.8 31 2-38 9-39 (280)
383 3r3s_A Oxidoreductase; structu 31.0 31 0.001 32.9 3.4 30 2-37 50-79 (294)
384 3pgx_A Carveol dehydrogenase; 31.0 32 0.0011 32.2 3.5 32 2-39 16-47 (280)
385 1odf_A YGR205W, hypothetical 3 30.9 39 0.0013 32.7 4.2 41 2-44 32-75 (290)
386 2wyu_A Enoyl-[acyl carrier pro 30.9 38 0.0013 31.3 4.0 31 2-37 9-40 (261)
387 3nrc_A Enoyl-[acyl-carrier-pro 30.8 43 0.0015 31.3 4.4 34 2-40 27-61 (280)
388 1d7o_A Enoyl-[acyl-carrier pro 30.8 39 0.0014 31.8 4.1 35 2-41 9-44 (297)
389 1w6u_A 2,4-dienoyl-COA reducta 30.5 32 0.0011 32.3 3.4 30 2-37 27-56 (302)
390 1uf9_A TT1252 protein; P-loop, 30.5 40 0.0014 29.3 3.8 25 2-32 9-33 (203)
391 2vk2_A YTFQ, ABC transporter p 30.3 2.6E+02 0.0089 25.7 9.8 81 297-397 2-89 (306)
392 1yrb_A ATP(GTP)binding protein 30.3 61 0.0021 29.5 5.3 38 4-44 17-54 (262)
393 1oaa_A Sepiapterin reductase; 30.3 32 0.0011 31.7 3.3 31 2-38 7-40 (259)
394 4eaq_A DTMP kinase, thymidylat 30.1 38 0.0013 31.3 3.8 31 2-35 27-57 (229)
395 2zuv_A Lacto-N-biose phosphory 30.1 71 0.0024 35.4 6.3 83 297-398 438-543 (759)
396 3da7_A Barnase circular permut 30.0 40 0.0014 28.8 3.4 28 54-92 26-53 (111)
397 2c20_A UDP-glucose 4-epimerase 29.9 50 0.0017 31.1 4.7 32 1-38 1-32 (330)
398 1a7j_A Phosphoribulokinase; tr 29.9 33 0.0011 33.1 3.4 41 2-44 6-46 (290)
399 3oig_A Enoyl-[acyl-carrier-pro 29.7 43 0.0015 30.9 4.1 31 2-37 8-39 (266)
400 2a4k_A 3-oxoacyl-[acyl carrier 29.7 34 0.0012 31.9 3.4 31 2-38 7-37 (263)
401 3qvo_A NMRA family protein; st 29.7 44 0.0015 30.2 4.1 35 1-41 23-58 (236)
402 4amg_A Snogd; transferase, pol 29.4 37 0.0013 32.7 3.7 37 1-40 23-59 (400)
403 1jtv_A 17 beta-hydroxysteroid 29.2 29 0.00098 33.8 2.9 30 2-37 3-32 (327)
404 2p5y_A UDP-glucose 4-epimerase 29.1 48 0.0016 31.1 4.3 30 1-37 1-30 (311)
405 3tb6_A Arabinose metabolism tr 28.8 3.2E+02 0.011 24.5 10.8 85 298-397 16-105 (298)
406 3afo_A NADH kinase POS5; alpha 28.7 24 0.00081 36.2 2.2 35 361-400 113-148 (388)
407 3kvo_A Hydroxysteroid dehydrog 28.5 35 0.0012 33.7 3.4 32 2-39 46-77 (346)
408 3r6d_A NAD-dependent epimerase 28.4 56 0.0019 29.0 4.5 34 1-40 5-39 (221)
409 2lpm_A Two-component response 28.3 1.2E+02 0.0042 25.3 6.4 75 296-395 7-83 (123)
410 3d02_A Putative LACI-type tran 28.2 2.3E+02 0.008 25.7 9.0 34 361-398 60-93 (303)
411 3gdg_A Probable NADP-dependent 28.2 40 0.0014 31.0 3.6 31 2-37 21-52 (267)
412 2rh8_A Anthocyanidin reductase 28.1 60 0.002 30.7 4.9 34 2-41 10-43 (338)
413 3bbl_A Regulatory protein of L 28.0 3E+02 0.01 25.0 9.7 31 361-397 63-93 (287)
414 3e70_C DPA, signal recognition 27.8 83 0.0028 31.0 6.0 39 2-42 130-168 (328)
415 2grj_A Dephospho-COA kinase; T 27.7 46 0.0016 30.1 3.8 26 3-34 14-40 (192)
416 3kkj_A Amine oxidase, flavin-c 27.5 34 0.0012 29.2 2.8 28 15-42 9-36 (336)
417 3rft_A Uronate dehydrogenase; 27.5 32 0.0011 31.9 2.8 35 1-41 3-37 (267)
418 1y63_A LMAJ004144AAA protein; 27.5 39 0.0013 29.6 3.2 22 2-25 11-32 (184)
419 2c29_D Dihydroflavonol 4-reduc 27.5 55 0.0019 31.0 4.5 34 2-41 6-39 (337)
420 3p94_A GDSL-like lipase; serin 27.3 42 0.0014 28.9 3.4 60 118-185 59-125 (204)
421 2vfb_A Arylamine N-acetyltrans 27.3 72 0.0025 30.8 5.3 53 22-74 76-133 (280)
422 2gk4_A Conserved hypothetical 27.0 42 0.0014 31.9 3.5 39 2-40 4-52 (232)
423 3eag_A UDP-N-acetylmuramate:L- 26.7 3E+02 0.01 26.5 9.8 28 298-329 5-33 (326)
424 3k4h_A Putative transcriptiona 26.7 3.5E+02 0.012 24.3 10.3 31 361-397 68-98 (292)
425 3uug_A Multiple sugar-binding 26.7 3.8E+02 0.013 24.7 11.0 81 297-397 3-90 (330)
426 3u5c_A 40S ribosomal protein S 26.6 2.3E+02 0.0078 27.4 8.6 97 299-419 72-188 (252)
427 3gv0_A Transcriptional regulat 26.5 1.6E+02 0.0054 27.0 7.4 31 361-397 65-95 (288)
428 1rrv_A Glycosyltransferase GTF 26.5 59 0.002 31.9 4.7 38 1-41 1-38 (416)
429 3cs3_A Sugar-binding transcrip 26.5 1.3E+02 0.0045 27.3 6.8 30 362-397 57-86 (277)
430 2pk3_A GDP-6-deoxy-D-LYXO-4-he 26.4 64 0.0022 30.2 4.7 35 1-41 12-46 (321)
431 3e48_A Putative nucleoside-dip 26.3 58 0.002 30.1 4.4 34 1-41 1-35 (289)
432 3o74_A Fructose transport syst 26.3 3.4E+02 0.012 24.0 10.0 32 361-397 57-88 (272)
433 2if2_A Dephospho-COA kinase; a 26.1 42 0.0014 29.5 3.2 23 1-25 1-23 (204)
434 3d8u_A PURR transcriptional re 25.9 2.4E+02 0.0084 25.2 8.5 31 361-397 58-88 (275)
435 1w5r_A Arylamine N-acetyltrans 25.7 74 0.0025 30.7 5.1 53 22-74 79-136 (278)
436 3brq_A HTH-type transcriptiona 25.6 3.7E+02 0.013 24.1 9.8 82 296-397 18-107 (296)
437 3d7l_A LIN1944 protein; APC893 25.6 66 0.0022 28.0 4.4 33 1-41 4-36 (202)
438 2h3h_A Sugar ABC transporter, 25.6 1.9E+02 0.0065 26.8 7.9 33 361-397 56-88 (313)
439 4hv4_A UDP-N-acetylmuramate--L 25.4 68 0.0023 33.3 5.1 57 2-64 123-179 (494)
440 2qt1_A Nicotinamide riboside k 25.3 39 0.0013 29.9 2.8 37 2-44 22-58 (207)
441 3grk_A Enoyl-(acyl-carrier-pro 25.3 56 0.0019 31.0 4.1 31 2-37 32-63 (293)
442 3eag_A UDP-N-acetylmuramate:L- 25.3 1.1E+02 0.0037 29.7 6.3 59 2-64 109-174 (326)
443 3r6m_A YEAZ, resuscitation pro 24.8 38 0.0013 31.7 2.7 61 361-422 55-122 (213)
444 4h08_A Putative hydrolase; GDS 24.8 70 0.0024 27.8 4.4 28 137-166 72-101 (200)
445 2bd0_A Sepiapterin reductase; 24.7 47 0.0016 30.0 3.3 25 2-32 3-27 (244)
446 2f6r_A COA synthase, bifunctio 24.6 49 0.0017 31.5 3.5 34 1-42 75-108 (281)
447 4id9_A Short-chain dehydrogena 24.0 62 0.0021 30.7 4.2 34 2-41 20-53 (347)
448 3e61_A Putative transcriptiona 24.0 3.5E+02 0.012 24.2 9.2 77 297-397 8-92 (277)
449 3awd_A GOX2181, putative polyo 23.8 72 0.0025 28.9 4.4 30 2-37 14-43 (260)
450 3ic5_A Putative saccharopine d 23.4 90 0.0031 24.3 4.4 33 2-41 6-39 (118)
451 2zkq_b 40S ribosomal protein S 23.4 1.2E+02 0.004 30.1 6.0 76 299-398 73-148 (295)
452 4fs3_A Enoyl-[acyl-carrier-pro 23.3 72 0.0025 29.6 4.4 31 2-37 7-38 (256)
453 2fep_A Catabolite control prot 23.2 4.2E+02 0.014 24.0 11.3 79 297-397 16-101 (289)
454 1f0k_A MURG, UDP-N-acetylgluco 23.1 72 0.0025 30.1 4.4 35 1-40 7-43 (364)
455 1u7z_A Coenzyme A biosynthesis 23.1 50 0.0017 31.2 3.2 32 2-38 9-55 (226)
456 1udb_A Epimerase, UDP-galactos 23.0 78 0.0027 29.9 4.7 28 4-37 3-30 (338)
457 3i42_A Response regulator rece 22.9 1.9E+02 0.0065 22.4 6.4 61 87-169 12-72 (127)
458 3h4t_A Glycosyltransferase GTF 22.8 63 0.0022 31.8 4.1 35 1-38 1-35 (404)
459 4fzr_A SSFS6; structural genom 22.8 58 0.002 31.6 3.7 36 1-39 16-51 (398)
460 3trf_A Shikimate kinase, SK; a 22.8 64 0.0022 27.7 3.7 24 2-27 6-29 (185)
461 3m2p_A UDP-N-acetylglucosamine 22.6 79 0.0027 29.6 4.6 33 2-40 3-35 (311)
462 3sc6_A DTDP-4-dehydrorhamnose 22.6 39 0.0013 31.2 2.3 33 1-39 4-37 (287)
463 1uz5_A MOEA protein, 402AA lon 22.5 83 0.0028 32.1 5.0 45 111-166 226-271 (402)
464 1yzf_A Lipase/acylhydrolase; s 22.5 89 0.003 26.3 4.5 32 138-171 66-103 (195)
465 2qgz_A Helicase loader, putati 22.4 62 0.0021 31.3 3.8 61 2-64 153-223 (308)
466 1t2a_A GDP-mannose 4,6 dehydra 22.4 88 0.003 30.1 4.9 33 2-40 25-57 (375)
467 2q1w_A Putative nucleotide sug 22.4 89 0.0031 29.6 4.9 34 1-40 21-54 (333)
468 3otg_A CALG1; calicheamicin, T 22.3 60 0.0021 31.4 3.7 36 1-39 21-56 (412)
469 3d3w_A L-xylulose reductase; u 22.2 82 0.0028 28.3 4.4 32 2-39 8-39 (244)
470 3qk7_A Transcriptional regulat 22.2 2.2E+02 0.0075 26.1 7.5 31 361-397 64-94 (294)
471 2vpt_A Lipolytic enzyme; ester 22.1 24 0.00082 31.4 0.7 12 138-149 82-93 (215)
472 2ehd_A Oxidoreductase, oxidore 22.1 80 0.0027 28.2 4.3 32 2-39 6-37 (234)
473 2p4h_X Vestitone reductase; NA 22.1 81 0.0028 29.4 4.5 31 2-38 2-32 (322)
474 1rj9_A FTSY, signal recognitio 22.0 89 0.003 30.4 4.9 38 3-42 104-141 (304)
475 1ek6_A UDP-galactose 4-epimera 22.0 75 0.0026 30.1 4.3 30 2-37 3-32 (348)
476 3f9i_A 3-oxoacyl-[acyl-carrier 21.9 77 0.0026 28.7 4.2 31 2-38 15-45 (249)
477 3eod_A Protein HNR; response r 21.6 2.5E+02 0.0085 21.8 6.9 57 90-165 19-75 (130)
478 4hv4_A UDP-N-acetylmuramate--L 21.6 4E+02 0.014 27.4 10.1 77 298-396 23-110 (494)
479 3d3q_A TRNA delta(2)-isopenten 21.6 1.1E+02 0.0037 30.6 5.5 44 2-52 8-54 (340)
480 2oho_A Glutamate racemase; iso 21.5 65 0.0022 30.7 3.7 59 160-220 25-84 (273)
481 1iir_A Glycosyltransferase GTF 21.5 93 0.0032 30.6 5.0 39 1-42 1-39 (415)
482 1n7h_A GDP-D-mannose-4,6-dehyd 21.4 91 0.0031 30.1 4.8 33 2-40 29-61 (381)
483 1ivn_A Thioesterase I; hydrola 21.4 82 0.0028 27.0 4.1 41 139-181 62-106 (190)
484 3ruf_A WBGU; rossmann fold, UD 21.4 97 0.0033 29.4 4.9 33 2-40 26-58 (351)
485 3egc_A Putative ribose operon 21.3 2.7E+02 0.0093 25.2 8.0 32 296-329 7-43 (291)
486 3e9n_A Putative short-chain de 21.3 43 0.0015 30.5 2.3 30 2-38 6-35 (245)
487 2p6p_A Glycosyl transferase; X 21.3 98 0.0033 29.7 5.0 37 1-40 1-37 (384)
488 3tsa_A SPNG, NDP-rhamnosyltran 21.3 70 0.0024 30.8 3.9 35 1-38 2-36 (391)
489 3oml_A GH14720P, peroxisomal m 21.2 47 0.0016 35.5 2.9 32 2-39 20-51 (613)
490 3vps_A TUNA, NAD-dependent epi 21.2 90 0.0031 28.9 4.6 33 2-40 8-40 (321)
491 1sb8_A WBPP; epimerase, 4-epim 21.2 94 0.0032 29.6 4.9 33 1-39 27-59 (352)
492 2rjo_A Twin-arginine transloca 21.2 4.9E+02 0.017 24.2 9.9 81 297-397 5-94 (332)
493 3p9x_A Phosphoribosylglycinami 21.2 2.8E+02 0.0096 25.7 7.9 142 90-261 12-175 (211)
494 1usg_A Leucine-specific bindin 21.1 3.3E+02 0.011 25.1 8.6 33 361-398 68-100 (346)
495 1jjv_A Dephospho-COA kinase; P 21.0 77 0.0026 27.8 3.9 27 1-33 2-28 (206)
496 3lw7_A Adenylate kinase relate 21.0 80 0.0027 26.1 3.8 27 2-34 2-28 (179)
497 2b69_A UDP-glucuronate decarbo 20.9 88 0.003 29.7 4.6 32 2-39 28-59 (343)
498 2qxy_A Response regulator; reg 20.9 1.6E+02 0.0055 23.4 5.6 60 87-169 13-72 (142)
499 2fn9_A Ribose ABC transporter, 20.9 4.6E+02 0.016 23.5 11.6 33 361-397 57-89 (290)
500 1qf9_A UMP/CMP kinase, protein 20.8 74 0.0025 27.1 3.6 25 1-27 6-30 (194)
No 1
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=4e-179 Score=1411.84 Aligned_cols=445 Identities=47% Similarity=0.833 Sum_probs=428.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg~e~dlDlg~yerf~~~ 80 (466)
||||||||||+|||||||+|||||+|||+|||+||+||||||||||||||||||||||||||||+||||||||||||||+
T Consensus 3 ~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpylnvd~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 82 (535)
T 3nva_A 3 NKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGHYERFMDV 82 (535)
T ss_dssp CEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSSSSSTTCCHHHHCCCEECTTCCEECTHHHHHHHHHCC
T ss_pred ceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 012331 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (466)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs~pf~ 160 (466)
+|||+||+||||||++||+|||+|||||||||||||||||||+||+++|+ ..+|||||||||||||||||+|||
T Consensus 83 ~l~~~~n~ttg~iy~~vi~ker~g~ylg~tvqviphit~eik~~i~~~~~------~~~~dv~i~eiggtvgdies~pf~ 156 (535)
T 3nva_A 83 NMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQIKDMIRYASK------INNAEITLVEIGGTVGDIESLPFL 156 (535)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHH------HHTCSEEEEEECSCTTSGGGHHHH
T ss_pred CcccccCcchhHHHHHHHHHHhcCCcCCCeeEECCCchHHHHHHHHHhhc------cCCCCEEEEEeCCccchhcccHHH
Confidence 99999999999999999999999999999999999999999999999995 468999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCchhhhHHHhhcCCCcccEEEEecCCCCCcchhcccCccCCCCCCC
Q 012331 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (466)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~~~l~s~~r~KisL~~~l~~~~ 240 (466)
||+||||+++|++|+|||||||||||+++||+||||||||||+|||.|||||+|||||++++++++|+|+||||||++++
T Consensus 157 ea~rq~~~~~g~~n~~~ih~tlvp~~~~~ge~ktkptqhsv~~Lrs~GIqPdilvcRs~~~l~~~~r~KiaLfc~V~~~~ 236 (535)
T 3nva_A 157 EAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDH 236 (535)
T ss_dssp HHHHHHHHHHCTTTEEEEEEEECCBCTTTSSBCCHHHHHHHHHHHHHTCCCSEEEEEESSCCCHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCchHHHHHHHHhCCCCCCEEEEecCCCCCHHHHHhhhhhcCCChhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHcchhhhhHhhcCCCCCCChhhHHHHHHHHhhhc--CCCCCeEEEEEeccCCchhhHHHHHH
Q 012331 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICD--GLHEPVRIAMVGKYTGLSDAYLSILK 318 (466)
Q Consensus 241 Vi~i~dVdTrY~lpl~LreqG~~~~ii~~l~l~~~~~~~~l~~W~~lv~~v~--~~~~~v~IaIVgkY~g~~Day~SI~~ 318 (466)
||+++|+||||++|++||+||+++.++++|+|+ .+.+++++|+++++++. ++.++++||+||||+++.|+|.|+.+
T Consensus 237 VI~i~DvdtiY~vpl~L~~qGl~~~~~~~l~l~--~~~~~~~~w~~~~~~~~~~~~~~~v~IalVGKY~~l~DaY~Sv~e 314 (535)
T 3nva_A 237 IVSSYDVETSYEVPIILESQKLVSKILSRLKLE--DRQVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIKE 314 (535)
T ss_dssp EEEEECCSCGGGHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHTTTCCCEEEEEEEESCTTSGGGGHHHHH
T ss_pred eEecCCCChHHHhHHHHHHCCcHHHHHHHcCCC--CCCCCHHHHHHHHHHhhccCCCCeeEEEEEecCcCCchhHHHHHH
Confidence 999999999999999999999999999999997 45678999999999998 78889999999999999999999999
Q ss_pred HHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEeh
Q 012331 319 ALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (466)
Q Consensus 319 aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGIC 398 (466)
||.|+|.+..+++++.|+++++++..+. .+|+.|.++|||++|||||+++.+|+++++++++++++|+||||
T Consensus 315 AL~hag~~~~~~V~I~wIds~~l~~~~~--------~~~~~L~~~DgIIlpGG~G~~~~~g~i~~ir~a~~~~~PiLGIC 386 (535)
T 3nva_A 315 AIYHASAYIGVRPKLIWIESTDLESDTK--------NLNEILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHNIPFLGIC 386 (535)
T ss_dssp HHHHHHHHTTCEEEEEEEEGGGGCCSSS--------CCTTTTTSCSEEEECCCCSSTTHHHHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHcCCCeEEEEecchhcccccc--------chhhhccCCCEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEC
Confidence 9999999999999999999998865321 12467899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccccCCCCcccCCCCCCCeEEeCCCCC-CCCCccccccCCcceEEecCCc
Q 012331 399 LGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQIKDC 461 (466)
Q Consensus 399 LGmQllaia~Gr~v~klk~a~s~Ef~~~~~~pVi~l~~e~~-~~~~GgtmRLG~~~~~~~~~~~ 461 (466)
+|||+|++||||+++|+++++|+||++.+++|++.+|+++. ..+||||||||+++|.|++||.
T Consensus 387 lG~Qll~va~Gg~v~g~qda~s~Ef~~~~~~pvI~~m~eq~~~~~~ggtmrlg~h~v~l~~gS~ 450 (535)
T 3nva_A 387 FGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILKEGTI 450 (535)
T ss_dssp HHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEECTTSH
T ss_pred cchhHHHHHhhccccCccCCcccccCCCCCCCeeecchhcccccccCCccccCceEEEEcCCCc
Confidence 99999999999999999999999999999999999999864 5889999999999999999974
No 2
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=100.00 E-value=1.2e-148 Score=1192.43 Aligned_cols=442 Identities=51% Similarity=0.873 Sum_probs=415.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg~e~dlDlg~yerf~~~ 80 (466)
||||||||||+||+|||+++||||+||+++||+|+++|+|||||||||||||+||||||||+||+|+||||||||||+++
T Consensus 12 ~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~g~~~~~~~~ 91 (550)
T 1vco_A 12 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVTADGAETDLDIGHYERFLDM 91 (550)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECSSCSSGGGSCSSTTSCCEECTTCCEECTHHHHHHHHHTS
T ss_pred eeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecccccccCccccCcccCCceEECCCCceehhhhccHHhcCCc
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 012331 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (466)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs~pf~ 160 (466)
.|+++||+||||||++||+|||+|||+|+|||||||||||||+||++++. ..++||||||+||||||||||||+
T Consensus 92 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~------~~~~d~~i~e~~gt~~di~~~~~~ 165 (550)
T 1vco_A 92 DLSRGNNLTTGQVYLSVIQKERRGEYLSQTVQVIPHITDEIKERIRKVAE------EQKAEIVVVEVGGTVGDIESLPFL 165 (550)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCTTTHHHHHHHHHHHHHHH------HTTCSEEEEEECSCTTSSTTHHHH
T ss_pred ccCCCCCeeccEEchhhhhhhcccccccCceEEhhHHHHHHHHHHHHHhc------ccCCCEEEEECCCChhHhhhHHHH
Confidence 99999999999999999999999999999999999999999999999985 457999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCchhhhHHHhhcCCCcccEEEEecCCCCCcchhcccCccCCCCCCC
Q 012331 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (466)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~~~l~s~~r~KisL~~~l~~~~ 240 (466)
||+||||+++|++|+|||||||||||+++||+|||||||||++|||.|||||++|||++++++++||+|+||||||++++
T Consensus 166 ~~~rq~~~~~~~~~~~~~h~~~~p~~~~~~e~ktkptq~sv~~lrs~gi~pd~lvvR~~~~~~~~~r~k~sL~~~v~~~~ 245 (550)
T 1vco_A 166 EAIRQFRFDEGEGNTLYLHLTLVPYLETSEEFKTKPTQHSVATLRGVGIQPDILVLRSARPVPEEVRRKVALFTNVRPGH 245 (550)
T ss_dssp HHHHTHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHHTTCCCSEEEEEESSCCCHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHhHhhCcCCEEEEEEeCeecccCCCCcCCCCcchhHHHHhcCCCccCEEEEeCCCCCCcchhcccchhcCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHcchhhhhHhhcCCCCCCChhhHHHHHHHHhhhcCCCCCeEEEEEeccCCchhhHHHHHHHH
Q 012331 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL 320 (466)
Q Consensus 241 Vi~i~dVdTrY~lpl~LreqG~~~~ii~~l~l~~~~~~~~l~~W~~lv~~v~~~~~~v~IaIVgkY~g~~Day~SI~~aL 320 (466)
||+++||||||+||++||+||++++++.+++++ ...+++..|.+++.++.++.++++|+++|||+.+.|+|.|+.++|
T Consensus 246 Vi~~~dvdt~y~lp~~lr~~G~~~~v~~~~~l~--~~~~~l~~w~~~~~~~~~~~~~v~I~ivgkyv~l~D~y~Sv~~aL 323 (550)
T 1vco_A 246 VFSSPTVEHLYEVPLLLEEQGLGRAVERALGLE--AVIPNLSFWQEAVRVLKHPERTVKIAIAGKYVKMPDAYLSLLEAL 323 (550)
T ss_dssp EEEEECCSCTTHHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHSCSEEEEEEEEESCC---CTTHHHHHHH
T ss_pred eeecCCCChHHHHHHHHHHcCChhhhHhhCCCC--chhHHHHHhHHHHHhhcCCCCceEEcccCCeEEEEecHHHHHHHH
Confidence 999999999999999999999999999999986 355678899999999988888899999999999999999999999
Q ss_pred HHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEehHH
Q 012331 321 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (466)
Q Consensus 321 ~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGICLG 400 (466)
.+++.+..+++.+.|+++++++.++ +++.+.++||||||||||+++.+|+++++++++++++|+||||||
T Consensus 324 ~~~g~~~g~~v~I~~~d~~~~~~~~----------~~~~L~~~DGIILpGGfGd~~~~g~i~~ir~a~e~~iPiLGICLG 393 (550)
T 1vco_A 324 RHAGIKNRARVEVKWVDAESLEAAD----------LEEAFRDVSGILVPGGFGVRGIEGKVRAAQYARERKIPYLGICLG 393 (550)
T ss_dssp HHHHHHTTEEEEEEEEEGGGC--CC----------HHHHTTTCSCEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHHHHHcCCeEEEEEeCccccccch----------HHHHHhcCCEEEECCCCCCcchhhhHHHHHHHHHCCCcEEEECcC
Confidence 9999988888899999987654211 335678899999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccccCCCCcccCCCCCCCeEEeCCCC-CCCCCccccccCCcceEEecCC
Q 012331 401 MQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEG-SKTHMGGTMRLGSRRTYFQIKD 460 (466)
Q Consensus 401 mQllaia~Gr~v~klk~a~s~Ef~~~~~~pVi~l~~e~-~~~~~GgtmRLG~~~~~~~~~~ 460 (466)
||+|+++||+++++|+++||.||++++++|++.+++++ .++++|+|||||.++|.+.+++
T Consensus 394 mQlL~~a~Gg~v~~l~~~~s~E~~~~~~hpvi~~~~~q~~i~~~ggtmrlG~~~v~i~~~s 454 (550)
T 1vco_A 394 LQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIKPGT 454 (550)
T ss_dssp HHHHHHHHHHHTSCCTTCEETTTCTTCSCEEEEESCGGGCC---CCCCEEEEEEEEECTTS
T ss_pred HHHHHHHhCcccccCCccccccccCCCCCCeEEeccccccccccCCcccccceEEEEccCc
Confidence 99999999999999999999999999999999999874 5789999999999999998765
No 3
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=100.00 E-value=3.7e-146 Score=1172.04 Aligned_cols=440 Identities=50% Similarity=0.835 Sum_probs=411.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg~e~dlDlg~yerf~~~ 80 (466)
||||||||||+|++|||+++||||+||+++||+|+++|+|||||||||||||+||||||||+||+|+||||||||||+|+
T Consensus 3 ~~~i~v~gg~~s~~gk~~~~~~l~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~~~~~~~~~~ 82 (545)
T 1s1m_A 3 TNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRT 82 (545)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECCSCSCGGGSCTTTSCCCEECTTSCEECTHHHHHHHHCSS
T ss_pred ceEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeeeeccccccCCCCccCcccCCCeEECCCCCeehhhhccceeeece
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 012331 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (466)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs~pf~ 160 (466)
.|+++||+|+||||++||+|||+|||+|+|||++||+|||||+||++++. ++||||||+||||||||||||+
T Consensus 83 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~--------~~d~~i~e~~gt~~di~~~~~~ 154 (545)
T 1s1m_A 83 KMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGE--------GHDVVLVEIGGTVGDIESLPFL 154 (545)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHT--------TCSEEEEEECSCTTSSTTHHHH
T ss_pred eecCCCCeeccEEeeehhhhccccccccCceeehhHHHHHHHHHHHHHhc--------cCCEEEEECCCChhhhhChHHH
Confidence 99999999999999999999999999999999999999999999999983 6899999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCchhhhHHHhhcCCCcccEEEEecCCCCCcchhcccCccCCCCCCC
Q 012331 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (466)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~~~l~s~~r~KisL~~~l~~~~ 240 (466)
||+||||+++|++|+|||||||||||+++||+|||||||||++|||.|||||+||||++++++++||+|+||||||++++
T Consensus 155 ~~~~q~~~~~~~~~~~~~h~~~~p~~~~~ge~ktkptq~sv~~l~s~gi~pd~lv~R~~~~~~~~~r~kisL~~~v~~~~ 234 (545)
T 1s1m_A 155 EAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKA 234 (545)
T ss_dssp HHHHHHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHTTTCCCSEEEEEESSCCCHHHHHHHHHTTCCCSSC
T ss_pred HHHHHHhHhhCcCcEEEEEEeCcccccCCCCcCCCCCcCCHHHHhCCCCccCEEEEeCCCCCCchhhccCChhhCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHcchhhhhHhhcCCCCCCChhhHHHHHHHHhhhcCCCCCeEEEEEeccCCchhhHHHHHHHH
Q 012331 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL 320 (466)
Q Consensus 241 Vi~i~dVdTrY~lpl~LreqG~~~~ii~~l~l~~~~~~~~l~~W~~lv~~v~~~~~~v~IaIVgkY~g~~Day~SI~~aL 320 (466)
||+++||||||+||++||+||++++++.+++++ ...+++++|.+++++++++...++||++|||+.+.|+|.|+.++|
T Consensus 235 Vi~~~dvdt~y~lp~~lr~~G~~~~ii~~~~l~--~~~~~l~~w~~lv~~v~~~~~~v~i~~vGkyv~l~D~y~Si~~aL 312 (545)
T 1s1m_A 235 VISLKDVDSIYKIPGLLKSQGLDDYICKRFSLN--CPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEAL 312 (545)
T ss_dssp EEEEECCSCGGGHHHHHHHTTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHCCSEEEEEEEEESSCSSGGGGHHHHHHH
T ss_pred ceecCCCChHHHHHHHHHHcCChhhhhhhCCCC--chhHHHHHHHHHHHhccCCCCeEEeCCcCCeEEEEEHHHHHHHHH
Confidence 999999999999999999999999999999986 345688899999999999888899999999999999999999999
Q ss_pred HHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEehHH
Q 012331 321 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (466)
Q Consensus 321 ~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGICLG 400 (466)
.++|+++.+++.+.|+++++++.+ +++.+.++||||||||||++..+++++++++++++++|+||||||
T Consensus 313 ~~~G~~~~~~V~i~~~d~e~i~~~-----------~~~~l~~~DGIilsGGpg~~~~~g~~~~i~~a~~~~~PiLGIClG 381 (545)
T 1s1m_A 313 KHGGLKNRVSVNIKLIDSQDVETR-----------GVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLG 381 (545)
T ss_dssp HHHHHHHTEEEEEEEEEHHHHHHH-----------CTTTTTTCSEEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHhCcccCCeEEEccCCHHHhhhh-----------hhhhhhcCCEEEECCCCCCccchhhHHHHHHHHHCCCcEEEECCh
Confidence 999999878888999987654210 113467899999999999998899999999999999999999999
Q ss_pred HHHHHHHhccccccccCCCCcccCCCCCCCeEEeC----------CCC-CCCCCccccccCCcceEEecCCc
Q 012331 401 MQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFM----------PEG-SKTHMGGTMRLGSRRTYFQIKDC 461 (466)
Q Consensus 401 mQllaia~Gr~v~klk~a~s~Ef~~~~~~pVi~l~----------~e~-~~~~~GgtmRLG~~~~~~~~~~~ 461 (466)
||+|++|||+++++|+++||+||+++++||+++++ +++ ...++|||||||.++|.+.++|-
T Consensus 382 ~Qll~va~Gg~v~~l~~a~s~E~~~~~~hpvi~l~~~w~~~~g~~~~q~~~~~~ggtmrlG~~~v~l~~~s~ 453 (545)
T 1s1m_A 382 MQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSL 453 (545)
T ss_dssp HHHHHHHHHHHHHCCTTCEETTTCSSCSCEEEECTTTCCCTTSCCC----------CCEEEEEEEEECTTCH
T ss_pred HHHHHHHhCCceecCCCCcccccCCCCCCceEEeecccccccccccccccccccCccccccceeeEeccCCH
Confidence 99999999999999999999999999999999998 443 35689999999999999988763
No 4
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=100.00 E-value=7.9e-145 Score=1051.58 Aligned_cols=272 Identities=67% Similarity=1.118 Sum_probs=229.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg~e~dlDlg~yerf~~~ 80 (466)
||||||||||+|||||||+|||||+|||+|||+|++||||||||||||||||||||||||||||+||||||||||||||+
T Consensus 23 mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (294)
T 2c5m_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (294)
T ss_dssp CEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCCCCC---------------------------------
T ss_pred eEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 012331 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (466)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs~pf~ 160 (466)
+|+++||+||||||++||+|||+|||||||||||||||||||+||+++|++|||++..+|||||||||||||||||+||+
T Consensus 103 ~lt~~nNiTtGkIY~~VI~KERrGdYLGkTVQVIPHiTdeIk~~I~~~a~~pvd~~~~~~Dv~IiEiGGTVGDIES~PFl 182 (294)
T 2c5m_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (294)
T ss_dssp --CCTTEEEHHHHHHHHHHHHHTSCSCSSCCCTTTHHHHHHHHHHHHHTTCC------CCSEEEEEECSCTTCSTTHHHH
T ss_pred CCcccccccHHHHHHHHHHHHhcCCcCCceeEEcCCchHHHHHHHHHHhcCCccccCCCCCEEEEEeCCcchhhcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCchhhhHHHhhcCCCcccEEEEecCCCCCcchhcccCccCCCCCCC
Q 012331 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (466)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~~~l~s~~r~KisL~~~l~~~~ 240 (466)
||+||||+++|++|+||||||||||++++||+||||||||||+|||.|||||+|+|||+.+++++.|+||||||+|+.++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlVP~i~~~gE~KTKPTQhSVk~Lr~~Gi~PDiivcRse~~l~~~~k~KIalfc~V~~~~ 262 (294)
T 2c5m_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (294)
T ss_dssp HHHHTTTTTSCTTTEEEEEEEECCCCTTTCSCCCHHHHHHHHHHHHTTCCCSEEEEECSSCCCTTHHHHHHHTTTCCCSC
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCCcHHHHHHHHHcCCCCCEEEEecCCCCCHHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHcchhhhhHhhcCC
Q 012331 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNL 272 (466)
Q Consensus 241 Vi~i~dVdTrY~lpl~LreqG~~~~ii~~l~l 272 (466)
||+++|++|+|+||++|++||+++.++++|+|
T Consensus 263 Vi~~~D~~~IY~VPl~l~~qgl~~~i~~~L~l 294 (294)
T 2c5m_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDL 294 (294)
T ss_dssp CEECCCCSCGGGHHHHHHTTTHHHHHHHHTTC
T ss_pred EEecCCcchHHHhhHHHHHCChHHHHHHHhCc
Confidence 99999999999999999999999999999875
No 5
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=100.00 E-value=3.2e-143 Score=1047.70 Aligned_cols=273 Identities=66% Similarity=1.114 Sum_probs=231.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg~e~dlDlg~yerf~~~ 80 (466)
||||||||||+|||||||+|||||+|||+|||+|+++|||||||||||||||||||||||||||+||||||||||||||+
T Consensus 23 ~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (295)
T 2vo1_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (295)
T ss_dssp CEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCCC----------------------------------
T ss_pred ceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccceecCCCCCChhhhceEEeecccccccccccchHhhccC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 012331 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (466)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs~pf~ 160 (466)
+|+++||+||||||++||+|||+|||||||||||||||||||+||+++|.+|+|++..+|||||||||||||||||+|||
T Consensus 103 ~l~~~~niTtGkiY~~Vi~kERrGdYLG~TVQvIPHiTdeIk~~I~~~a~~~~~~~~~~~Dv~IvEiGGTVGDIEs~PFl 182 (295)
T 2vo1_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (295)
T ss_dssp -----CEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHSCCSSSCCCCSEEEEEECSCTTCGGGHHHH
T ss_pred CcCccccccHHHHHHHHHHHHHcCCCCCCeEEecCChhhHHHHHHHHhhcccccccCCCCCEEEEEcCceeccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCchhhhHHHhhcCCCcccEEEEecCCCCCcchhcccCccCCCCCCC
Q 012331 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (466)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~~~l~s~~r~KisL~~~l~~~~ 240 (466)
||+||||+++|++|+||||||||||++++||+||||||||||+|||.|||||+|||||+.+++++.|+||||||+|++++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlvP~l~~~gE~KTKPTQhSVkeLr~~GIqPDiivcRse~pl~~~~k~KIAlFCnV~~~~ 262 (295)
T 2vo1_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (295)
T ss_dssp HHHHHHHHHSCGGGEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHTCCCSEEEEECSSCCCHHHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHhhcccceeEEEeeccccccccccccccchHhHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHccCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHcchhhhhHhhcCCC
Q 012331 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQ 273 (466)
Q Consensus 241 Vi~i~dVdTrY~lpl~LreqG~~~~ii~~l~l~ 273 (466)
||+++|++|+|+||+.|++||+++.++++|+|+
T Consensus 263 VI~~~Dv~sIYeVPl~L~~qgl~~~i~~~L~LP 295 (295)
T 2vo1_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDLP 295 (295)
T ss_dssp EEEECCCSSGGGHHHHHHHTTHHHHHHHHHTCC
T ss_pred EEEcCCcCcHHHHHHHHHHCCchHHHHHHcCCC
Confidence 999999999999999999999999999999985
No 6
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=99.97 E-value=1.6e-32 Score=283.10 Aligned_cols=214 Identities=19% Similarity=0.275 Sum_probs=164.8
Q ss_pred eeeeeeecCCCccccCchhhhHHHhhcCCCcccEEEEecCCCCCcchhcccCccCCCCCCCeeecCCCCccchhhHHHHH
Q 012331 180 VSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRD 259 (466)
Q Consensus 180 ~t~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~~~l~s~~r~KisL~~~l~~~~Vi~i~dVdTrY~lpl~Lre 259 (466)
+.--|.|+.-|=-+ .++||.+|++.++|||+.++.|||||++.||.+||++++|++|.||||| +|+++||+
T Consensus 53 ~~t~P~iGn~Gv~~--------~d~es~~~~~~g~vv~~~~~~~s~~~~~~~l~~~l~~~~i~gi~giDTR-~lt~~iR~ 123 (379)
T 1a9x_B 53 TLTYPHIGNVGTND--------ADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTR-KLTRLLRE 123 (379)
T ss_dssp EECSSBCCTTCCCG--------GGCSSSSCCBSEEECSBCCSCCCCTTCCSCHHHHHHHTTCEEEESSCHH-HHHHHHHH
T ss_pred EEcCCCccEEccCc--------hhhccccceEEEEEEccCCCCCCcccccCCHHHHHHHCCCccccCCCHH-HHHHHHHh
Confidence 33346676555322 3689999999999999999999999999999999999999999999999 99999999
Q ss_pred cchhhhhHhhc-CCCCCCChhhHHHHH-----HHHhhhcCC-------CC----------------CeEEEEEeccCCch
Q 012331 260 QKAHEAIFKVL-NLQGTTKEPLLKEWT-----SRAEICDGL-------HE----------------PVRIAMVGKYTGLS 310 (466)
Q Consensus 260 qG~~~~ii~~l-~l~~~~~~~~l~~W~-----~lv~~v~~~-------~~----------------~v~IaIVgkY~g~~ 310 (466)
+|+|+++|... ..+..+..+.+..|. +++..+++. .. ..+|+++| | +
T Consensus 124 ~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~viD-~-G-- 199 (379)
T 1a9x_B 124 KGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYD-F-G-- 199 (379)
T ss_dssp HCCEEEEEEESSSCCHHHHHHHHHHCCCSTTCBCHHHHSCSSCEEECCCCCBTTTBSCCCCCGGGCCEEEEEEE-S-S--
T ss_pred cCCeeEEEecCCCCCHHHHHHHHHhCCCccccCccceeCCCCCEEeCCCCcccccccccccccccCCCEEEEEE-C-C--
Confidence 99999988653 211100111233442 455655531 11 46899999 7 6
Q ss_pred hhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEecCCCCCCC-chhHHHHHHHH
Q 012331 311 DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNRG-VQGKILAAKYA 387 (466)
Q Consensus 311 Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllPGGfG~rg-~eG~i~aIk~a 387 (466)
...|+.++|..+|+.+.+ ++.+.- + +.+ .++||||||||||++. ....++.++++
T Consensus 200 -~k~ni~r~L~~~G~~v~v------vp~~~~--------~-------e~i~~~~~DGliLsGGPgdp~~~~~~~~~Ir~~ 257 (379)
T 1a9x_B 200 -AKRNILRMLVDRGCRLTI------VPAQTS--------A-------EDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKF 257 (379)
T ss_dssp -CCHHHHHHHHHTTEEEEE------EETTCC--------H-------HHHHTTCCSEEEECCCSBCSTTCHHHHHHHHHH
T ss_pred -ChHHHHHHHHHCCCEEEE------EeccCC--------H-------HHHhhcCCCEEEEeCCCCChHHHHHHHHHHHHH
Confidence 347899999999988765 333210 0 222 3699999999999984 46788999999
Q ss_pred HHcCCcEEEehHHHHHHHHHhccccccccCCCCcccCCCCCCCeEE
Q 012331 388 REHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVI 433 (466)
Q Consensus 388 re~~iPvLGICLGmQllaia~Gr~v~klk~a~s~Ef~~~~~~pVi~ 433 (466)
.+.++|+||||||||+|+.|+|+++++++++|+. .++||..
T Consensus 258 ~~~~~PILGIClG~QLLa~A~GG~v~k~~~gh~g-----~n~pv~~ 298 (379)
T 1a9x_B 258 LETDIPVFGICLGHQLLALASGAKTVKMKFGHHG-----GNHPVKD 298 (379)
T ss_dssp TTSCCCEEEETHHHHHHHHHTTCCEEEEEEEEEE-----EEEEEEE
T ss_pred HHcCCCEEEECchHHHHHHHhCcEEEeccccccc-----CceeeEe
Confidence 9989999999999999999999999999988875 4566654
No 7
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=99.95 E-value=4.6e-29 Score=248.40 Aligned_cols=179 Identities=50% Similarity=0.778 Sum_probs=146.0
Q ss_pred HHHHHHHhhhcCCCCCeEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHcc
Q 012331 282 KEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK 361 (466)
Q Consensus 282 ~~W~~lv~~v~~~~~~v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~ 361 (466)
..|+.+++++.++..+++|+|+++|.+..++|.|+.++|+++|+.+..++.+.|+++++++......+++.|+.+|+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~Iavv~d~~~~~~s~~si~~~L~~~G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 89 (289)
T 2v4u_A 10 GVDLGTENLYFQSMKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLC 89 (289)
T ss_dssp -------------CEEEEEEEEESCSSCCGGGHHHHHHHHHHHHHTTEEEEEEEEEGGGGSHHHHHHCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhCcCCceEEEEEecCcCCCccHHHHHHHHHHhhhhhCCceEEEEechhhcccccccCChhhhhhHHHHHh
Confidence 35999999998887789999997798888889999999999999888888999999876543211224556777888888
Q ss_pred CCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEehHHHHHHHHHhccccccccCCCCcccCCCCCCCeEEeCCCCCCC
Q 012331 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT 441 (466)
Q Consensus 362 ~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk~a~s~Ef~~~~~~pVi~l~~e~~~~ 441 (466)
++||||||||||++...+.+++++++++.++|+||||+|||+|+.++|++++|++++++.||+++.++|++.+|+++...
T Consensus 90 ~~dgiil~GG~~~~~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a~Gg~v~~~~~~~~~e~~~~~~~~~i~~~~~h~~~ 169 (289)
T 2v4u_A 90 KADGILVPGGFGIRGTLGKLQAISWARTKKIPFLGVXLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPG 169 (289)
T ss_dssp HCSEEEECSCCSSTTHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHHHHHHSCCTTEEESTTCTTCSEEEEEECCBCCTT
T ss_pred hCCEEEecCCCCchhHHHHHHHHHHHHHcCCcEEEECccHHHHHHHHhccccccccCcccccCccccccceecchhhccc
Confidence 99999999999998888999999999999999999999999999999999999999999999998899999999987666
Q ss_pred CCccccccCCcceEEe-cCC
Q 012331 442 HMGGTMRLGSRRTYFQ-IKD 460 (466)
Q Consensus 442 ~~GgtmRLG~~~~~~~-~~~ 460 (466)
++||+||+|.+++.+. +++
T Consensus 170 ~~~~~~~~g~~~v~~~~~~s 189 (289)
T 2v4u_A 170 NLGGTMRLGIRRTVFKTENS 189 (289)
T ss_dssp CSSCBCEEEEEEEEESCSCC
T ss_pred ccCCccccceEEEEEecCCC
Confidence 7899999999999997 565
No 8
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=99.92 E-value=2.9e-26 Score=226.38 Aligned_cols=156 Identities=45% Similarity=0.743 Sum_probs=133.0
Q ss_pred CeEEEEEecc-CCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCC
Q 012331 297 PVRIAMVGKY-TGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (466)
Q Consensus 297 ~v~IaIVgkY-~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~r 375 (466)
+++||||++| +.+.|+|.|+.++|.+++.+..+++.+.|+++++++..+ . ...++.+.++||||||||||++
T Consensus 8 ~~~Iaivg~y~~~~~dny~S~~~aL~~~g~~~~~~v~v~~~~~~~~~~~~----~---~~~~~~~~~~dgiil~GG~~~~ 80 (273)
T 2w7t_A 8 TVRIAFVGKYLQDAGDTYFSVLQCFEHCQIALQVRLDILYVDSEELEGPN----A---DEARKALLGCDGIFVPGGFGNR 80 (273)
T ss_dssp CEEEEEEECCHHHHTTTTHHHHHHHHHHHHHHTCCEEEEEEEGGGGSSTT----T---HHHHHHHHTCSEEEECCCCTTT
T ss_pred CCEEEEEeCCCcCCchHHHHHHHHHHHHHHhcCCceEEeccChhhccccc----c---hhHHHHHhhCCEEEecCCCCCc
Confidence 3899999989 678889999999999999988888899999987653211 0 0022457799999999999998
Q ss_pred CchhHHHHHHHHHHcCCcEEEehHHHHHHHHHhccccccccCCCCcccCCCCCCCeEEeCCCCCCCCCccccccCCcceE
Q 012331 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (466)
Q Consensus 376 g~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk~a~s~Ef~~~~~~pVi~l~~e~~~~~~GgtmRLG~~~~~ 455 (466)
...+.++++++++++++|+||||+|||+|+++||+++.++++++|.||++++++|++.+|+ +....++++||+|.+++.
T Consensus 81 ~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~a~Gg~v~~~~~~~s~E~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~v~ 159 (273)
T 2w7t_A 81 GVDGKCAAAQVARMNNIPYFGVXLGMQVAVIELSRNVVGWSDANSEEFNKESTHQVVRIMD-CDRNKMGANMHLGACDVY 159 (273)
T ss_dssp THHHHHHHHHHHHHHTCCEEEETHHHHHHHHHHHHHTTCCTTCEETTTCTTCSCEEEECCG-GGBCSSCBCCEEEEEEEE
T ss_pred CchhHHHHHHHHHHCCCcEEEECcCHHHHHHHHhCccccccCCchhhcccccCCCceeecc-ccccccCCcccccceEEE
Confidence 8889999999999999999999999999999999999999999999999888899998884 445566789999999999
Q ss_pred Eec-CC
Q 012331 456 FQI-KD 460 (466)
Q Consensus 456 ~~~-~~ 460 (466)
+.+ ++
T Consensus 160 ~~~~~s 165 (273)
T 2w7t_A 160 IVEKSS 165 (273)
T ss_dssp ECCTTS
T ss_pred EecCCc
Confidence 863 55
No 9
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.55 E-value=2e-15 Score=141.69 Aligned_cols=92 Identities=18% Similarity=0.279 Sum_probs=66.7
Q ss_pred EEEEEecc-CCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCCc
Q 012331 299 RIAMVGKY-TGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (466)
Q Consensus 299 ~IaIVgkY-~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg~ 377 (466)
+|+||| | .+ +..||.+||+++|+++.+. . +| +++.++||||+|| +|++..
T Consensus 4 ~I~iiD-~g~~---n~~si~~al~~~G~~~~v~------~-----------~~-------~~l~~~D~lilPG-~g~~~~ 54 (211)
T 4gud_A 4 NVVIID-TGCA---NISSVKFAIERLGYAVTIS------R-----------DP-------QVVLAADKLFLPG-VGTASE 54 (211)
T ss_dssp CEEEEC-CCCT---THHHHHHHHHHTTCCEEEE------C-----------CH-------HHHHHCSEEEECC-CSCHHH
T ss_pred EEEEEE-CCCC---hHHHHHHHHHHCCCEEEEE------C-----------CH-------HHHhCCCEEEECC-CCCHHH
Confidence 699999 8 44 7799999999999988752 1 12 5677899999996 444321
Q ss_pred h----hHHHHHHHHHHcCCcEEEehHHHHHHHHHhccccccccCCC
Q 012331 378 Q----GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDAN 419 (466)
Q Consensus 378 e----G~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk~a~ 419 (466)
. .....++.+++.++|+||||+|||+|+.++|+++.+....+
T Consensus 55 ~~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~~g~~~~~~~~~~ 100 (211)
T 4gud_A 55 AMKNLTERDLIELVKRVEKPLLGICLGMQLLGKLSEEKGQKADEIV 100 (211)
T ss_dssp HHHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSEECCC----CCCE
T ss_pred HHHHHHhcChHHHHHHcCCCEEEEchhHhHHHHHhCCcccccCCcc
Confidence 1 11223667788999999999999999999999887655443
No 10
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.47 E-value=2.5e-13 Score=132.16 Aligned_cols=101 Identities=19% Similarity=0.243 Sum_probs=70.1
Q ss_pred CeEEEEEeccC-C---------chhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEE
Q 012331 297 PVRIAMVGKYT-G---------LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGI 366 (466)
Q Consensus 297 ~v~IaIVgkY~-g---------~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGI 366 (466)
++.|||...+. . ..-.+.+.+++|..+|+.+.+ ++...-. . ..+.+.++|||
T Consensus 4 ~p~IGi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~pv~------lp~~~~~-----------~-~~~~l~~~DGl 65 (254)
T 3fij_A 4 KPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIA------LPIDDPS-----------T-AVQAISLVDGL 65 (254)
T ss_dssp CCEEEEEC------------------CHHHHHHHHHHTCEEEE------ECCCCGG-----------G-HHHHHHTCSEE
T ss_pred CCEEEEeCCcccccccccCCcchhhhhHHHHHHHHHCCCEEEE------EeCCCch-----------H-HHHHHhhCCEE
Confidence 35788876421 0 111235788999999988765 3432110 0 12457789999
Q ss_pred EecCCCC-------CCCc-----------hhHHHHHHHHHHcCCcEEEehHHHHHHHHHhccccccc
Q 012331 367 LVPGGFG-------NRGV-----------QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNL 415 (466)
Q Consensus 367 llPGGfG-------~rg~-----------eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~kl 415 (466)
+||||++ ++.. ...++++++++++++|+||||+|||+|+.++|+++++.
T Consensus 66 il~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a~Gg~v~~~ 132 (254)
T 3fij_A 66 LLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGTLYQD 132 (254)
T ss_dssp EECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHTTCCEESS
T ss_pred EECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCceecc
Confidence 9999965 2111 23788999999999999999999999999999998764
No 11
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.42 E-value=2.1e-13 Score=149.30 Aligned_cols=98 Identities=15% Similarity=0.137 Sum_probs=77.2
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCCc
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg~ 377 (466)
.+|.++|.|.+ ...++.++|...|+.+.+ ++.+.. ..+.++|||||+||||++..
T Consensus 447 k~IlviD~gds---f~~~l~~~l~~~G~~v~V------v~~d~~----------------~~~~~~DgIIlsGGPg~p~d 501 (645)
T 3r75_A 447 CRALIVDAEDH---FTAMIAQQLSSLGLATEV------CGVHDA----------------VDLARYDVVVMGPGPGDPSD 501 (645)
T ss_dssp CEEEEEESSCT---HHHHHHHHHHHTTCEEEE------EETTCC----------------CCGGGCSEEEECCCSSCTTC
T ss_pred CEEEEEECCcc---HHHHHHHHHHHCCCEEEE------EECCCc----------------ccccCCCEEEECCCCCChhh
Confidence 58999997655 447899999999987765 222211 13457899999999999754
Q ss_pred hh------HHHHHHHHHHcCCcEEEehHHHHHHHHHhccccccccCCCC
Q 012331 378 QG------KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANS 420 (466)
Q Consensus 378 eG------~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk~a~s 420 (466)
.+ ..+.++++++.++|+||||||||+|+.++|++|.+.+..+.
T Consensus 502 ~~~p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~alGG~V~~~~~~~~ 550 (645)
T 3r75_A 502 AGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRREVPNQ 550 (645)
T ss_dssp TTSHHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEEEEEE
T ss_pred hhhhhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHhCCEEEcCCCccc
Confidence 33 56788999999999999999999999999999988765544
No 12
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.42 E-value=3.9e-13 Score=125.42 Aligned_cols=93 Identities=22% Similarity=0.349 Sum_probs=68.7
Q ss_pred EEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHcc--CCCEEEecCCCCCCCc
Q 012331 300 IAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRGV 377 (466)
Q Consensus 300 IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~--~~DGIllPGGfG~rg~ 377 (466)
|+|+|.+..+ -.++.++|+.+|+.+.+ ++.++.. ++.+. ++|||++|||+|.+..
T Consensus 4 i~iid~~~s~---~~~~~~~l~~~G~~~~v------~~~~~~~--------------~~~~~~~~~dglil~gG~~~~~~ 60 (195)
T 1qdl_B 4 TLIIDNYDSF---VYNIAQIVGELGSYPIV------IRNDEIS--------------IKGIERIDPDRLIISPGPGTPEK 60 (195)
T ss_dssp EEEEECSCSS---HHHHHHHHHHTTCEEEE------EETTTSC--------------HHHHHHHCCSEEEECCCSSCTTS
T ss_pred EEEEECCCch---HHHHHHHHHhCCCEEEE------EeCCCCC--------------HHHHhhCCCCEEEECCCCCChhh
Confidence 9999966442 24788999999987765 3332110 02333 6999999999998743
Q ss_pred ---hh-HHHHHHHHHHcCCcEEEehHHHHHHHHHhcccccccc
Q 012331 378 ---QG-KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLR 416 (466)
Q Consensus 378 ---eG-~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk 416 (466)
.+ ..+.++++ +.++|+||||+|||+|+.++|+++.+.+
T Consensus 61 ~~~~~~~~~~i~~~-~~~~PvLGIC~G~QlL~~~~gg~v~~~~ 102 (195)
T 1qdl_B 61 REDIGVSLDVIKYL-GKRTPILGVCLGHQAIGYAFGAKIRRAR 102 (195)
T ss_dssp HHHHTTHHHHHHHH-TTTSCEEEETHHHHHHHHHTTCEEEEEE
T ss_pred hhhhhHHHHHHHHh-cCCCcEEEEehHHHHHHHHhCCEEeccC
Confidence 23 34677775 7799999999999999999999998765
No 13
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.42 E-value=3.9e-13 Score=124.33 Aligned_cols=95 Identities=24% Similarity=0.284 Sum_probs=71.3
Q ss_pred EEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEecCCCCCCC
Q 012331 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNRG 376 (466)
Q Consensus 299 ~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllPGGfG~rg 376 (466)
.|+|+|.+.+ ...++.++|+.+|+.+.+ ++... ++ +.+ .++|||++|||+ ++.
T Consensus 2 mi~iid~~~~---~~~~~~~~l~~~G~~~~~------~~~~~--------~~-------~~~~~~~~dglil~Gg~-~~~ 56 (189)
T 1wl8_A 2 MIVIMDNGGQ---YVHRIWRTLRYLGVETKI------IPNTT--------PL-------EEIKAMNPKGIIFSGGP-SLE 56 (189)
T ss_dssp EEEEEECSCT---THHHHHHHHHHTTCEEEE------EETTC--------CH-------HHHHHTCCSEEEECCCS-CTT
T ss_pred eEEEEECCCc---hHHHHHHHHHHCCCeEEE------EECCC--------Ch-------HHhcccCCCEEEECCCC-Chh
Confidence 5999995544 456889999999987765 33321 01 233 369999999998 653
Q ss_pred chh-HHHHHHHHHHcCCcEEEehHHHHHHHHHhccccccccCC
Q 012331 377 VQG-KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDA 418 (466)
Q Consensus 377 ~eG-~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk~a 418 (466)
..+ ..+.++.+.+.++|+||||+|||+|+.++|+++.+++..
T Consensus 57 ~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~~gg~v~~~~~~ 99 (189)
T 1wl8_A 57 NTGNCEKVLEHYDEFNVPILGICLGHQLIAKFFGGKVGRGEKA 99 (189)
T ss_dssp CCTTHHHHHHTGGGTCSCEEEETHHHHHHHHHHTCEEEECSCC
T ss_pred hhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHHhCCceecCCCc
Confidence 333 467777766889999999999999999999999887544
No 14
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.40 E-value=3.7e-13 Score=127.67 Aligned_cols=97 Identities=26% Similarity=0.401 Sum_probs=72.1
Q ss_pred CCeEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCC-CCC
Q 012331 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGG-FGN 374 (466)
Q Consensus 296 ~~v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGG-fG~ 374 (466)
.-++|.++|.|.++. .++.++|+.+|+.+.+ ++.+. ++ +.+.++|||||||| +++
T Consensus 12 ~~~~i~~id~~~~~~---~~~~~~l~~~G~~~~v------v~~~~--------~~-------~~l~~~DglIl~GG~p~~ 67 (212)
T 2a9v_A 12 HMLKIYVVDNGGQWT---HREWRVLRELGVDTKI------VPNDI--------DS-------SELDGLDGLVLSGGAPNI 67 (212)
T ss_dssp CCCBEEEEEESCCTT---CHHHHHHHHTTCBCCE------EETTS--------CG-------GGGTTCSEEEEEEECSCG
T ss_pred ccceEEEEeCCCccH---HHHHHHHHHCCCEEEE------EeCCC--------CH-------HHHhCCCEEEECCCCCCC
Confidence 357999999765533 5788999999988765 33321 11 45667999999999 787
Q ss_pred CCch-hHHHHHHHHHHcCCcEEEehHHHHHHHHHhcccccccc
Q 012331 375 RGVQ-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLR 416 (466)
Q Consensus 375 rg~e-G~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk 416 (466)
+... ......+++++.++|+||||+|||+|+.++|+++.+.+
T Consensus 68 ~~~~~~~~~l~~~~~~~~~PiLGIC~G~Qll~~~lGg~v~~~~ 110 (212)
T 2a9v_A 68 DEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAK 110 (212)
T ss_dssp GGTGGGHHHHHHHHHHCCSCEEEETHHHHHHHHHTTCEEEEEE
T ss_pred CcccccchhHHHHHHhCCCCEEEEChHHHHHHHHhCCEEEcCC
Confidence 6221 22334456678999999999999999999999998764
No 15
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=2.3e-13 Score=125.41 Aligned_cols=85 Identities=21% Similarity=0.354 Sum_probs=64.0
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCC-
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg- 376 (466)
++|+|++.+ + +|.++.++|+.+|+.+.+ ++.. +.+.++|||++|||++++.
T Consensus 1 m~i~vl~~~-g---~~~~~~~~l~~~G~~~~~------~~~~------------------~~~~~~dglil~GG~~~~~~ 52 (186)
T 2ywj_A 1 MIIGVLAIQ-G---DVEEHEEAIKKAGYEAKK------VKRV------------------EDLEGIDALIIPGGESTAIG 52 (186)
T ss_dssp CEEEEECSS-S---CCHHHHHHHHHTTSEEEE------ECSG------------------GGGTTCSEEEECCSCHHHHH
T ss_pred CEEEEEecC-c---chHHHHHHHHHCCCEEEE------ECCh------------------HHhccCCEEEECCCCchhhh
Confidence 479999843 4 888899999999986654 3321 3567889999999987542
Q ss_pred ----chhHHHHHHHHHHcCCcEEEehHHHHHHHHHhccccc
Q 012331 377 ----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVL 413 (466)
Q Consensus 377 ----~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~ 413 (466)
..+..+. ++++++|+||||+|||+|+.++|+++-
T Consensus 53 ~~~~~~~~~~~---i~~~~~PilGIC~G~Qll~~~~gg~~~ 90 (186)
T 2ywj_A 53 KLMKKYGLLEK---IKNSNLPILGTCAGMVLLSKGTGINQI 90 (186)
T ss_dssp HHHHHTTHHHH---HHTCCCCEEEETHHHHHHSSCCSSCCC
T ss_pred hhhhccCHHHH---HHhcCCcEEEECHHHHHHHHHhCCCcC
Confidence 1223333 347899999999999999999998853
No 16
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.36 E-value=1.8e-12 Score=120.51 Aligned_cols=98 Identities=15% Similarity=0.170 Sum_probs=67.2
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHcc--CCCEEEecCCCCCC
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNR 375 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~--~~DGIllPGGfG~r 375 (466)
++|+|||.|.. --.++.++|+.+|+++.+ ++... .. ....+.+. +.|++|++||+|++
T Consensus 1 ~~i~iiDn~~s---~~~~i~~~l~~~G~~~~v------~~~~~-~~----------~~i~~~l~~~~~~~iil~gGpg~~ 60 (192)
T 1i1q_B 1 ADILLLDNIDS---FTWNLADQLRTNGHNVVI------YRNHI-PA----------QTLIDRLATMKNPVLMLSPGPGVP 60 (192)
T ss_dssp CEEEEEECSCS---SHHHHHHHHHHTTCEEEE------EETTS-CS----------HHHHHHHTTCSSEEEEECCCSSCG
T ss_pred CcEEEEECCcc---HHHHHHHHHHHCCCeEEE------EECCC-CH----------HHHHHHhhhccCCeEEECCCCcCc
Confidence 47999997644 236789999999987765 33321 00 00112222 34579999999997
Q ss_pred CchhHHHHHHHHHHcCCcEEEehHHHHHHHHHhccccccc
Q 012331 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNL 415 (466)
Q Consensus 376 g~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~kl 415 (466)
...+....+..+.+.++|+||||+|||+|+.++|+++.+.
T Consensus 61 ~~~~~~~~l~~~~~~~~PilGIC~G~Qll~~~~Gg~v~~~ 100 (192)
T 1i1q_B 61 SEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQA 100 (192)
T ss_dssp GGSTTHHHHHHHHBTTBCEEEETHHHHHHHHHTSCCCCC-
T ss_pred hhCchHHHHHHHHhcCCCEEEECcChHHHHHHhCCEEEeC
Confidence 5445444444456778999999999999999999988755
No 17
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.34 E-value=1.9e-12 Score=124.94 Aligned_cols=103 Identities=17% Similarity=0.257 Sum_probs=75.4
Q ss_pred CCCeEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCC
Q 012331 295 HEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN 374 (466)
Q Consensus 295 ~~~v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~ 374 (466)
...++|.++-.+ ... +-.++.++|+..|+.+.+ ++.++.+ ..| +.+.++||||||||+++
T Consensus 10 ~~~~~~~~i~~~-~~~-~~~~i~~~l~~~G~~v~v------~~~~~~~-----~~~-------~~l~~~Dglil~GG~~~ 69 (239)
T 1o1y_A 10 HHHVRVLAIRHV-EIE-DLGMMEDIFREKNWSFDY------LDTPKGE-----KLE-------RPLEEYSLVVLLGGYMG 69 (239)
T ss_dssp CCCCEEEEECSS-TTS-SCTHHHHHHHHTTCEEEE------ECGGGTC-----CCS-------SCGGGCSEEEECCCSCC
T ss_pred cceeEEEEEECC-CCC-CchHHHHHHHhCCCcEEE------eCCcCcc-----ccc-------cchhcCCEEEECCCCcc
Confidence 456899999765 211 445788889989987754 2221111 011 34678999999999876
Q ss_pred C-C------chhHHHHHHHHHHcCCcEEEehHHHHHHHHHhccccccccC
Q 012331 375 R-G------VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRD 417 (466)
Q Consensus 375 r-g------~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk~ 417 (466)
+ + +....+.++++.++++|+||||+|||+|+.++|+++.+.+.
T Consensus 70 ~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~alGG~v~~~~~ 119 (239)
T 1o1y_A 70 AYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKVLGASVYRGKN 119 (239)
T ss_dssp TTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEECTT
T ss_pred ccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHHcCCeEecCCC
Confidence 4 1 13577889999888999999999999999999999988765
No 18
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.31 E-value=4.8e-13 Score=127.70 Aligned_cols=97 Identities=18% Similarity=0.135 Sum_probs=62.8
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEecCCCCCC
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNR 375 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllPGGfG~r 375 (466)
.+|+|+|.+.+ .-.++.++|+.+|+.+.+ ++.+.- + +.+ .++|||+||||++++
T Consensus 25 ~~I~iiD~g~~---~~~~i~~~l~~~G~~~~v------v~~~~~--------~-------~~l~~~~~dglil~Gg~~~~ 80 (218)
T 2vpi_A 25 GAVVILDAGAQ---YGKVIDRRVRELFVQSEI------FPLETP--------A-------FAIKEQGFRAIIISGGPNSV 80 (218)
T ss_dssp TCEEEEECSTT---TTHHHHHHHHHTTCCEEE------ECTTCC--------H-------HHHHHHTCSEEEEEC-----
T ss_pred CeEEEEECCCc---hHHHHHHHHHHCCCEEEE------EECCCC--------h-------HHHhhcCCCEEEECCCCccc
Confidence 37999993344 236899999999987765 332210 0 122 469999999999864
Q ss_pred CchhHHHHHHHHHHcCCcEEEehHHHHHHHHHhccccccccCC
Q 012331 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDA 418 (466)
Q Consensus 376 g~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk~a 418 (466)
..+......+.+++.++|+||||+|||+|+.++|+++.+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~PilGIC~G~Qll~~~~GG~v~~~~~~ 123 (218)
T 2vpi_A 81 YAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKSVR 123 (218)
T ss_dssp ----CCCCCGGGGTSSCCEEEETHHHHHHHHHTTCCEEEEEEC
T ss_pred ccccchhHHHHHHHcCCCEEEEcHHHHHHHHHhCCceEeCCCC
Confidence 2111111223445789999999999999999999999887643
No 19
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.30 E-value=9.5e-13 Score=125.02 Aligned_cols=89 Identities=20% Similarity=0.347 Sum_probs=69.3
Q ss_pred CCeEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCC
Q 012331 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (466)
Q Consensus 296 ~~v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~r 375 (466)
.+++|+|++ +.+ +|.+.+++|+.+|+.+.+ ++.. +.+.++|||+||||++..
T Consensus 22 ~~~~I~il~-~~~---~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~Dglil~GG~~~~ 73 (219)
T 1q7r_A 22 SNMKIGVLG-LQG---AVREHVRAIEACGAEAVI------VKKS------------------EQLEGLDGLVLPGGESTT 73 (219)
T ss_dssp CCCEEEEES-CGG---GCHHHHHHHHHTTCEEEE------ECSG------------------GGGTTCSEEEECCCCHHH
T ss_pred CCCEEEEEe-CCC---CcHHHHHHHHHCCCEEEE------ECCH------------------HHHhhCCEEEECCCChHH
Confidence 367999998 533 677778999999987654 3321 246789999999998653
Q ss_pred C-----chhHHHHHHHHHHcCCcEEEehHHHHHHHHHhcccc
Q 012331 376 G-----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSV 412 (466)
Q Consensus 376 g-----~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v 412 (466)
. ..+..+.++++.+.++|+||||+|||+|+.++|+++
T Consensus 74 ~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~~gg~~ 115 (219)
T 1q7r_A 74 MRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKRIVGYD 115 (219)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEEEESSC
T ss_pred HHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHHhCCCC
Confidence 1 234567888998999999999999999999999976
No 20
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.27 E-value=1.8e-12 Score=122.09 Aligned_cols=89 Identities=17% Similarity=0.234 Sum_probs=66.4
Q ss_pred CCCeEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCC
Q 012331 295 HEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN 374 (466)
Q Consensus 295 ~~~v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~ 374 (466)
.++++|+|++ |.+ +|.++.++|+.+|+++.+ ++.. +.+.++|+|++|||+..
T Consensus 18 ~~~~~I~ii~-~~~---~~~~~~~~l~~~g~~~~~------~~~~------------------~~l~~~d~iil~GG~~~ 69 (208)
T 2iss_D 18 GSHMKIGVLG-VQG---DVREHVEALHKLGVETLI------VKLP------------------EQLDMVDGLILPGGEST 69 (208)
T ss_dssp --CCEEEEEC-SSS---CHHHHHHHHHHTTCEEEE------ECSG------------------GGGGGCSEEEECSSCHH
T ss_pred CCCcEEEEEE-CCC---chHHHHHHHHHCCCEEEE------eCCh------------------HHHhhCCEEEECCCcHH
Confidence 4568999998 745 899999999999876543 3321 23668999999998533
Q ss_pred C-C----chhHHHHHHHHHHcCCcEEEehHHHHHHHHHhccc
Q 012331 375 R-G----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARS 411 (466)
Q Consensus 375 r-g----~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~ 411 (466)
. + ..+..+.++++.++++|+||||+|||+|+.++|+.
T Consensus 70 ~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~~gg~ 111 (208)
T 2iss_D 70 TMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKRIKNY 111 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEEEC--
T ss_pred HHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHHcCCC
Confidence 1 1 12346788888889999999999999999999983
No 21
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.27 E-value=2.4e-12 Score=118.56 Aligned_cols=85 Identities=18% Similarity=0.296 Sum_probs=67.0
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCC--
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-- 375 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~r-- 375 (466)
++|||+. +.+ ++.++.++|+.+|+.+.+ ++.. +.+.++|||++|||++..
T Consensus 3 p~Igi~~-~~~---~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~dglil~GG~~~~~~ 54 (191)
T 2ywd_A 3 GVVGVLA-LQG---DFREHKEALKRLGIEAKE------VRKK------------------EHLEGLKALIVPGGESTTIG 54 (191)
T ss_dssp CCEEEEC-SSS---CHHHHHHHHHTTTCCCEE------ECSG------------------GGGTTCSEEEECSSCHHHHH
T ss_pred cEEEEEe-cCC---chHHHHHHHHHCCCEEEE------eCCh------------------hhhccCCEEEECCCChhhhH
Confidence 5799987 434 788999999999988765 2221 246679999999997431
Q ss_pred C---chhHHHHHHHHHHcC-CcEEEehHHHHHHHHHhcc
Q 012331 376 G---VQGKILAAKYAREHR-IPYLGICLGMQVAVIEFAR 410 (466)
Q Consensus 376 g---~eG~i~aIk~are~~-iPvLGICLGmQllaia~Gr 410 (466)
. .....+.++.+.+++ +|+||||+|||+|+.++|+
T Consensus 55 ~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~~gg 93 (191)
T 2ywd_A 55 KLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKEIVG 93 (191)
T ss_dssp HHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEEETT
T ss_pred HhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHHhCC
Confidence 1 135677888888889 9999999999999999998
No 22
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.26 E-value=1e-11 Score=119.25 Aligned_cols=99 Identities=18% Similarity=0.210 Sum_probs=71.4
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCC-
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg- 376 (466)
++|+++- ... .+....+.+.|...|+++.+ ..+...+ ..| +.+.++|||||||||+++.
T Consensus 1 m~i~vi~-h~~-~e~~g~~~~~l~~~g~~~~~----~~~~~~~-------~~p-------~~~~~~d~lii~GGp~~~~~ 60 (236)
T 3l7n_A 1 MRIHFIL-HET-FEAPGAYLAWAALRGHDVSM----TKVYRYE-------KLP-------KDIDDFDMLILMGGPQSPSS 60 (236)
T ss_dssp CEEEEEE-CCT-TSCCHHHHHHHHHTTCEEEE----EEGGGTC-------CCC-------SCGGGCSEEEECCCSSCTTC
T ss_pred CeEEEEe-CCC-CCCchHHHHHHHHCCCeEEE----EeeeCCC-------CCC-------CCccccCEEEECCCCCCccc
Confidence 4677776 322 22456777888889988765 2222211 011 2466899999999999841
Q ss_pred -------c--hhHHHHHHHHHHcCCcEEEehHHHHHHHHHhcccccccc
Q 012331 377 -------V--QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLR 416 (466)
Q Consensus 377 -------~--eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk 416 (466)
+ ....+.|+.+.+.++|+||||+|||+|+.++|+++.+.+
T Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~~Gg~v~~~~ 109 (236)
T 3l7n_A 61 TKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVAYGADYLHSP 109 (236)
T ss_dssp CTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHHTTCCCEEEE
T ss_pred ccccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHHhCCEEecCC
Confidence 1 336788999999999999999999999999999887754
No 23
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.26 E-value=1.2e-11 Score=133.27 Aligned_cols=94 Identities=23% Similarity=0.315 Sum_probs=68.9
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEecCCCCCC
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNR 375 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllPGGfG~r 375 (466)
-+|+|+| |.. + .-.+|.++|+++|+.+.+ ++.+. .. +.+ .++|||||||||+++
T Consensus 8 ~~IlilD-~Gs-~-~~~~I~r~lre~Gv~~ei------v~~~~-~~--------------~~i~~~~~dgIIlsGGp~s~ 63 (556)
T 3uow_A 8 DKILVLN-FGS-Q-YFHLIVKRLNNIKIFSET------KDYGV-EL--------------KDIKDMNIKGVILSGGPYSV 63 (556)
T ss_dssp CEEEEEE-SSC-T-THHHHHHHHHHTTCCEEE------EETTC-CG--------------GGTTTSCEEEEEECCCSCCT
T ss_pred CEEEEEE-CCC-c-cHHHHHHHHHHCCCeEEE------EECCC-CH--------------HHHhhcCCCEEEECCCCCcc
Confidence 4899999 622 1 346899999999988765 22211 00 233 378999999999886
Q ss_pred Cchh----HHHHHHHHHHcCCcEEEehHHHHHHHHHhccccccc
Q 012331 376 GVQG----KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNL 415 (466)
Q Consensus 376 g~eG----~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~kl 415 (466)
..++ ....++.+.+.++|+||||+|||+|+.++|++|.+.
T Consensus 64 ~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~lGG~V~~~ 107 (556)
T 3uow_A 64 TEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKS 107 (556)
T ss_dssp TSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHHTTCEEEEE
T ss_pred cccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHHhCCcEecC
Confidence 3322 124456677789999999999999999999999764
No 24
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.25 E-value=2.5e-12 Score=119.81 Aligned_cols=82 Identities=24% Similarity=0.388 Sum_probs=62.5
Q ss_pred eEEEEEecc-CCchhhHHHHHHHHHHcC-----CceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCC
Q 012331 298 VRIAMVGKY-TGLSDAYLSILKALLHAS-----VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGG 371 (466)
Q Consensus 298 v~IaIVgkY-~g~~Day~SI~~aL~~aG-----~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGG 371 (466)
++|+|+| | .+ ++.|+.++|+.+| +++.+ ++.. +. .++|||+||||
T Consensus 1 m~I~iid-~~~g---~~~s~~~~l~~~G~~~~~~~~~~------~~~~------------------~~-~~~dglilpG~ 51 (201)
T 1gpw_B 1 MRIGIIS-VGPG---NIMNLYRGVKRASENFEDVSIEL------VESP------------------RN-DLYDLLFIPGV 51 (201)
T ss_dssp CEEEEEC-CSSS---CCHHHHHHHHHHSTTBSSCEEEE------ECSC------------------CS-SCCSEEEECCC
T ss_pred CEEEEEe-cCCc---hHHHHHHHHHHcCCCCCceEEEE------ECCC------------------cc-cCCCEEEECCC
Confidence 5899998 7 34 6788899999998 66543 3221 23 57899999884
Q ss_pred CCCCCc-------hhHHHHHHHHHHcCCcEEEehHHHHHHHHHhc
Q 012331 372 FGNRGV-------QGKILAAKYAREHRIPYLGICLGMQVAVIEFA 409 (466)
Q Consensus 372 fG~rg~-------eG~i~aIk~are~~iPvLGICLGmQllaia~G 409 (466)
|+++. .+..+.++.+.+.++|+||||+|||+|+.+++
T Consensus 52 -g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~g 95 (201)
T 1gpw_B 52 -GHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESE 95 (201)
T ss_dssp -SCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEET
T ss_pred -CcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhhc
Confidence 55421 14667888888899999999999999999986
No 25
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.25 E-value=2.6e-12 Score=119.31 Aligned_cols=87 Identities=21% Similarity=0.304 Sum_probs=65.3
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCC-
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg- 376 (466)
++|+|++ |.+ +|.+..++|+.+|+.+.+ ++.. +.+.++|||++|||++...
T Consensus 2 m~I~il~-~~~---~~~~~~~~l~~~g~~~~~------~~~~------------------~~l~~~d~iil~GG~~~~~~ 53 (196)
T 2nv0_A 2 LTIGVLG-LQG---AVREHIHAIEACGAAGLV------VKRP------------------EQLNEVDGLILPGGESTTMR 53 (196)
T ss_dssp CEEEEEC-SSS---CCHHHHHHHHHTTCEEEE------ECSG------------------GGGGGCSEEEECCSCHHHHH
T ss_pred cEEEEEE-ccC---CcHHHHHHHHHCCCEEEE------eCCh------------------HHHhhCCEEEECCCChhhHH
Confidence 5899998 533 777778999999986543 3321 2466899999999986531
Q ss_pred ----chhHHHHHHHHHHcCCcEEEehHHHHHHHHHhcccc
Q 012331 377 ----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSV 412 (466)
Q Consensus 377 ----~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v 412 (466)
..+..+.++.+.++++|+||||+|||+|+.++|+++
T Consensus 54 ~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~~gg~~ 93 (196)
T 2nv0_A 54 RLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSD 93 (196)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBCCC---
T ss_pred HHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHHhcCCC
Confidence 134467888888999999999999999999999865
No 26
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.21 E-value=9.5e-12 Score=133.17 Aligned_cols=95 Identities=22% Similarity=0.334 Sum_probs=63.5
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHcc--CCCEEEecCCCCCC
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNR 375 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~--~~DGIllPGGfG~r 375 (466)
.+|+|+| | +.+ .-.+|.++|+++|+.+.+ ++.+.. . +.+. ++|||||||||++.
T Consensus 11 ~~I~IlD-~-g~~-~~~~i~r~lr~~Gv~~~i------~p~~~~-~--------------~~i~~~~~dgIILsGGp~sv 66 (527)
T 3tqi_A 11 HRILILD-F-GSQ-YAQLIARRVREIGVYCEL------MPCDID-E--------------ETIRDFNPHGIILSGGPETV 66 (527)
T ss_dssp SEEEEEE-C-SCT-THHHHHHHHHHHTCEEEE------EETTCC-S--------------SSSTTTCCSEEEECCCCC--
T ss_pred CeEEEEE-C-CCc-cHHHHHHHHHHCCCeEEE------EECCCC-H--------------HHHHhcCCCEEEECCcCccc
Confidence 4899999 6 311 226899999999988765 222110 0 1222 57999999999986
Q ss_pred CchhHHHHHHHHHHcCCcEEEehHHHHHHHHHhcccccccc
Q 012331 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLR 416 (466)
Q Consensus 376 g~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk 416 (466)
..++.....+.+.+.++|+||||+|||+|+.++|++|.+.+
T Consensus 67 ~~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~lGG~V~~~~ 107 (527)
T 3tqi_A 67 TLSHTLRAPAFIFEIGCPVLGICYGMQTMAYQLGGKVNRTA 107 (527)
T ss_dssp -------CCCSTTTSSSCEEEETHHHHHHHHHSSSCBC---
T ss_pred ccCCChhhHHHHHhcCCCEEEEChHHHHHHHHcCCeEEeCC
Confidence 55555555666778899999999999999999999997653
No 27
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.20 E-value=3.2e-11 Score=121.23 Aligned_cols=101 Identities=20% Similarity=0.178 Sum_probs=65.3
Q ss_pred CeEEEEEeccCCch--------hhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEe
Q 012331 297 PVRIAMVGKYTGLS--------DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILV 368 (466)
Q Consensus 297 ~v~IaIVgkY~g~~--------Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIll 368 (466)
++.|||........ -...++.++|+.+|+.+.+ ++... ++ ......+.++|||||
T Consensus 30 ~P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~v------v~~~~--------~~---~~i~~~l~~~dglil 92 (315)
T 1l9x_A 30 KPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVP------VRLDL--------TE---KDYEILFKSINGILF 92 (315)
T ss_dssp CCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEE------ECSSC--------CH---HHHHHHHHHSSEEEE
T ss_pred CCEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEE------EecCC--------CH---HHHHHHHhcCCEEEE
Confidence 57899997432111 1224788999999988765 33211 01 011133568999999
Q ss_pred cCCCCCCCch--h--HHHHHHHHHHc-----CCcEEEehHHHHHHHHHhcccccc
Q 012331 369 PGGFGNRGVQ--G--KILAAKYAREH-----RIPYLGICLGMQVAVIEFARSVLN 414 (466)
Q Consensus 369 PGGfG~rg~e--G--~i~aIk~are~-----~iPvLGICLGmQllaia~Gr~v~k 414 (466)
|||+++..-. + ....++.+++. ++|+||||+|||+|+.++|+++..
T Consensus 93 ~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~~~~ 147 (315)
T 1l9x_A 93 PGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLL 147 (315)
T ss_dssp CCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCCC
T ss_pred eCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCcccc
Confidence 9999874211 1 12234444443 699999999999999999998654
No 28
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.19 E-value=3.1e-11 Score=117.82 Aligned_cols=99 Identities=14% Similarity=0.177 Sum_probs=72.1
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCC--
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-- 375 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~r-- 375 (466)
.+|.++... .+ ....++.++|+..|+++.+ +....-+ ..| ..+.++||||||||++++
T Consensus 4 ~~vliiqh~-~~-e~~~~i~~~l~~~G~~v~v------~~~~~~~-----~~p-------~~~~~~d~lIl~GGp~~~~d 63 (250)
T 3m3p_A 4 KPVMIIQFS-AS-EGPGHFGDFLAGEHIPFQV------LRMDRSD-----PLP-------AEIRDCSGLAMMGGPMSAND 63 (250)
T ss_dssp CCEEEEESS-SS-CCCHHHHHHHHHTTCCEEE------EEGGGTC-----CCC-------SCGGGSSEEEECCCSSCTTS
T ss_pred CeEEEEECC-CC-CCHHHHHHHHHHCCCeEEE------EeccCCC-----cCc-------CccccCCEEEECCCCCcccc
Confidence 357777532 21 2456788899999998765 2221110 011 346789999999999763
Q ss_pred ---CchhHHHHHHHHHHcCCcEEEehHHHHHHHHHhcccccccc
Q 012331 376 ---GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLR 416 (466)
Q Consensus 376 ---g~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk 416 (466)
.+....+.++.+.+.++|+||||+|||+|+.++|++|.+.+
T Consensus 64 ~~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~lGG~V~~~~ 107 (250)
T 3m3p_A 64 DLPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKAMGGEVTDSP 107 (250)
T ss_dssp CCTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEE
T ss_pred cchHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCEEEeCC
Confidence 23456788888888899999999999999999999998765
No 29
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=99.19 E-value=9.2e-12 Score=118.43 Aligned_cols=88 Identities=16% Similarity=0.272 Sum_probs=67.3
Q ss_pred CeEEEEEeccCCchhhHHHHHHHHHHc---CCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCC
Q 012331 297 PVRIAMVGKYTGLSDAYLSILKALLHA---SVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG 373 (466)
Q Consensus 297 ~v~IaIVgkY~g~~Day~SI~~aL~~a---G~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG 373 (466)
+++|+|++ |.+ ++.+..++|+.+ |+.+.. ++. + +.+.++|||+||||+.
T Consensus 3 ~~~I~Il~-~~~---~~~~~~~~l~~~~~~G~~~~~------~~~-----------~-------~~l~~~dglil~GG~~ 54 (227)
T 2abw_A 3 EITIGVLS-LQG---DFEPHINHFIKLQIPSLNIIQ------VRN-----------V-------HDLGLCDGLVIPGGES 54 (227)
T ss_dssp CEEEEEEC-TTS---CCHHHHHHHHTTCCTTEEEEE------ECS-----------H-------HHHHTCSEEEECCSCH
T ss_pred CcEEEEEe-CCC---CcHHHHHHHHHhccCCeEEEE------EcC-----------c-------cccccCCEEEECCCcH
Confidence 58999998 544 567788999998 765432 322 1 3467899999999985
Q ss_pred CC-----Cc--hhHHHHHHHHHHc-CCcEEEehHHHHHHHHHhcccc
Q 012331 374 NR-----GV--QGKILAAKYAREH-RIPYLGICLGMQVAVIEFARSV 412 (466)
Q Consensus 374 ~r-----g~--eG~i~aIk~are~-~iPvLGICLGmQllaia~Gr~v 412 (466)
+. .. .+..+.++.+.+. ++|+||||+|||+|+.++++.+
T Consensus 55 ~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~~gg~~ 101 (227)
T 2abw_A 55 TTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIK 101 (227)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEEEECCC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHHhcCCc
Confidence 41 11 3567888888888 9999999999999999998864
No 30
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.15 E-value=1.6e-11 Score=131.22 Aligned_cols=95 Identities=18% Similarity=0.263 Sum_probs=66.9
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEecCCCCCC
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNR 375 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllPGGfG~r 375 (466)
.+|+|+| |.+ + .-.++.++|+.+|+.+.+ ++.+. ++ +.+ .++|||||||||++.
T Consensus 8 ~~IlIlD-~g~-~-~~~~i~r~lr~~G~~~~i------~p~~~--------~~-------~~i~~~~~dgiILsGGp~s~ 63 (525)
T 1gpm_A 8 HRILILD-FGS-Q-YTQLVARRVRELGVYCEL------WAWDV--------TE-------AQIRDFNPSGIILSGGPEST 63 (525)
T ss_dssp SEEEEEE-CSC-T-THHHHHHHHHHTTCEEEE------EESCC--------CH-------HHHHHHCCSEEEECCCSSCT
T ss_pred CEEEEEE-CCC-c-cHHHHHHHHHHCCCEEEE------EECCC--------CH-------HHHhccCCCEEEECCcCccc
Confidence 5899999 622 2 225789999999987764 33221 01 222 267999999999875
Q ss_pred CchhHHHHHHHHHHcCCcEEEehHHHHHHHHHhcccccccc
Q 012331 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLR 416 (466)
Q Consensus 376 g~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk 416 (466)
..++.....+.+.+.++|+||||+|||+|+.++|++|.+..
T Consensus 64 ~~~~~~~~~~~~~~~g~PvLGIC~G~Qlla~~~GG~V~~~~ 104 (525)
T 1gpm_A 64 TEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASN 104 (525)
T ss_dssp TSTTCCCCCGGGGTSSSCEEEETHHHHHHHHHHTCEEECCS
T ss_pred cccCCcchHHHHHHCCCCEEEEChHHHHHHHHcCCEEEeCC
Confidence 32221112345567899999999999999999999998764
No 31
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.13 E-value=3e-11 Score=112.73 Aligned_cols=82 Identities=29% Similarity=0.441 Sum_probs=62.5
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCC--
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-- 375 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~r-- 375 (466)
++|+|++ | +. .++.++.++|+.+|+.+.+ ++.. +.+.++|||++|| +|++
T Consensus 3 ~~I~iid-~-~~-~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~d~lil~G-~g~~~~ 54 (200)
T 1ka9_H 3 MKALLID-Y-GS-GNLRSAAKALEAAGFSVAV------AQDP------------------KAHEEADLLVLPG-QGHFGQ 54 (200)
T ss_dssp CEEEEEC-S-SC-SCHHHHHHHHHHTTCEEEE------ESST------------------TSCSSCSEEEECC-CSCHHH
T ss_pred cEEEEEe-C-CC-ccHHHHHHHHHHCCCeEEE------ecCh------------------HHcccCCEEEECC-CCcHHH
Confidence 5899998 6 22 2778889999999987764 3221 2456899999977 3442
Q ss_pred ---Cc--hhHHHHHHHHHHcCCcEEEehHHHHHHHHH
Q 012331 376 ---GV--QGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (466)
Q Consensus 376 ---g~--eG~i~aIk~are~~iPvLGICLGmQllaia 407 (466)
.+ .+..+.++.+.+.++|+||||+|||+|+.+
T Consensus 55 ~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~ 91 (200)
T 1ka9_H 55 VMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEG 91 (200)
T ss_dssp HHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSE
T ss_pred HHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHh
Confidence 11 346788999889999999999999999988
No 32
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.13 E-value=2.7e-11 Score=128.86 Aligned_cols=93 Identities=17% Similarity=0.185 Sum_probs=64.9
Q ss_pred EEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHcc--CCCEEEecCCCCCCCc
Q 012331 300 IAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRGV 377 (466)
Q Consensus 300 IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~--~~DGIllPGGfG~rg~ 377 (466)
|+|+| | +.+ .-.+|.++|+.+|+.+.+ ++.+. ++ +.+. ++|||||||||++...
T Consensus 2 i~ilD-~-g~~-~~~~i~r~l~~~G~~~~i------~p~~~--------~~-------~~i~~~~~dgiIlsGGp~s~~~ 57 (503)
T 2ywb_A 2 VLVLD-F-GSQ-YTRLIARRLRELRAFSLI------LPGDA--------PL-------EEVLKHRPQALILSGGPRSVFD 57 (503)
T ss_dssp EEEEE-S-SCT-THHHHHHHHHTTTCCEEE------EETTC--------CH-------HHHHTTCCSEEEECCCSSCSSC
T ss_pred EEEEE-C-CCc-HHHHHHHHHHHCCCEEEE------EECCC--------CH-------HHHHhcCCCEEEECCCCchhcc
Confidence 88999 6 322 226899999999988765 23221 01 2333 5699999999987522
Q ss_pred hhHHHHHHHHHHcCCcEEEehHHHHHHHHHhcccccccc
Q 012331 378 QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLR 416 (466)
Q Consensus 378 eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk 416 (466)
++.....+.+.+.++|+||||+|||+|+.++|++|.+..
T Consensus 58 ~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~~GG~v~~~~ 96 (503)
T 2ywb_A 58 PDAPRPDPRLFSSGLPLLGICYGMQLLAQELGGRVERAG 96 (503)
T ss_dssp TTCCCCCGGGGCSSCCEEEETHHHHHHHHTTTCEEECC-
T ss_pred CCCcchHHHHHhCCCCEEEECHHHHHHHHHhCCeEeeCC
Confidence 221112245567899999999999999999999998754
No 33
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.06 E-value=2e-10 Score=107.29 Aligned_cols=93 Identities=22% Similarity=0.260 Sum_probs=68.8
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCC-C
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-G 376 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~r-g 376 (466)
++|+|++ |.+.. ...++.++|+.+|+.+.+ ++.. +.+.++|+|+||||++.. .
T Consensus 3 ~~i~il~-~~~~~-~~~~~~~~l~~~g~~~~~------~~~~------------------~~~~~~d~lil~Gg~~~~~~ 56 (213)
T 3d54_D 3 PRACVVV-YPGSN-CDRDAYHALEINGFEPSY------VGLD------------------DKLDDYELIILPGGFSYGDY 56 (213)
T ss_dssp CEEEEEC-CTTEE-EHHHHHHHHHTTTCEEEE------ECTT------------------CCCSSCSEEEECEECGGGGC
T ss_pred cEEEEEE-cCCCC-ccHHHHHHHHHCCCEEEE------EecC------------------CCcccCCEEEECCCCchhhh
Confidence 5899998 64432 225789999999977654 3221 135678999999997532 1
Q ss_pred --------chhHHHHHHHHHHcCCcEEEehHHHHHHHHH--hcccccccc
Q 012331 377 --------VQGKILAAKYAREHRIPYLGICLGMQVAVIE--FARSVLNLR 416 (466)
Q Consensus 377 --------~eG~i~aIk~are~~iPvLGICLGmQllaia--~Gr~v~klk 416 (466)
.....+.++.+.++++|+||||+|||+|+.+ +++++...+
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~v~~~~ 106 (213)
T 3d54_D 57 LRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGALLQNS 106 (213)
T ss_dssp SSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSEEECCS
T ss_pred hccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCCeecCC
Confidence 2456788888888899999999999999999 888876543
No 34
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.01 E-value=9.4e-11 Score=129.38 Aligned_cols=95 Identities=19% Similarity=0.195 Sum_probs=60.8
Q ss_pred eEEEEEeccCCchhhH-HHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEecCCCCC
Q 012331 298 VRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGN 374 (466)
Q Consensus 298 v~IaIVgkY~g~~Day-~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllPGGfG~ 374 (466)
.+|+|+| |.+ .| ..+.+.|+.+|+.+.+ ++.+.. + +.+ .++|||||||||++
T Consensus 30 ~~I~VLD-fg~---q~~~liar~lre~Gv~~~i------vp~~~~--------~-------e~i~~~~~dGIILsGGp~s 84 (697)
T 2vxo_A 30 GAVVILD-AGA---QYGKVIDRRVRELFVQSEI------FPLETP--------A-------FAIKEQGFRAIIISGGPNS 84 (697)
T ss_dssp CCEEEEE-EC-----CHHHHHHHHHHTTCCEEE------EETTCC--------H-------HHHHHHTCSEEEEEECC--
T ss_pred CEEEEEE-CCC---chHHHHHHHHHHCCCEEEE------EECCCC--------H-------HHHhhcCCCEEEECCCCCc
Confidence 4799999 523 33 2478999999988765 343211 0 222 58999999999997
Q ss_pred CCchhHHHHHHHHHHcCCcEEEehHHHHHHHHHhccccccccC
Q 012331 375 RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRD 417 (466)
Q Consensus 375 rg~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr~v~klk~ 417 (466)
...++.....+.+.+.++|+||||+|||+|+.++|+++.+++.
T Consensus 85 ~~~~~~~~~~~~i~~~g~PvLGIC~G~QlLa~~lGG~v~~~~~ 127 (697)
T 2vxo_A 85 VYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKSV 127 (697)
T ss_dssp -----CCCCCGGGTTSSCCEEEEEHHHHHHHHHTTCCBCC---
T ss_pred ccCccchhHHHHHHhCCCCEEEECHHHHHHHHHhCCeEeecCC
Confidence 5211111112334567899999999999999999999988653
No 35
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.82 E-value=1e-09 Score=118.13 Aligned_cols=84 Identities=21% Similarity=0.342 Sum_probs=62.7
Q ss_pred eEEEEEeccC-CchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCC
Q 012331 298 VRIAMVGKYT-GLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (466)
Q Consensus 298 v~IaIVgkY~-g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg 376 (466)
++|+|++ |. + ++.++.++|+.+|+.+.+ ++..+ . ..+.++|||+|||| |++.
T Consensus 5 ~~I~Iid-~~~g---~~~~~~~~l~~~G~~~~v------v~~~~--~--------------~~l~~~DglILpGg-G~~~ 57 (555)
T 1jvn_A 5 PVVHVID-VESG---NLQSLTNAIEHLGYEVQL------VKSPK--D--------------FNISGTSRLILPGV-GNYG 57 (555)
T ss_dssp CEEEEEC-CSCS---CCHHHHHHHHHTTCEEEE------ESSGG--G--------------CCSTTCSCEEEEEC-SCHH
T ss_pred CEEEEEE-CCCC---CHHHHHHHHHHCCCEEEE------ECCcc--c--------------cccccCCEEEECCC-CchH
Confidence 5899998 73 4 567899999999987654 33210 0 12678999999883 3421
Q ss_pred -------chhHHHHHHHHHHcCCcEEEehHHHHHHHHHh
Q 012331 377 -------VQGKILAAKYAREHRIPYLGICLGMQVAVIEF 408 (466)
Q Consensus 377 -------~eG~i~aIk~are~~iPvLGICLGmQllaia~ 408 (466)
..+..+.++.+.+.++|+||||+|||+|+.++
T Consensus 58 ~~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a~ 96 (555)
T 1jvn_A 58 HFVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAGS 96 (555)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEEE
T ss_pred hHhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhhh
Confidence 12456788888889999999999999999988
No 36
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.56 E-value=5.2e-08 Score=92.44 Aligned_cols=92 Identities=14% Similarity=0.006 Sum_probs=64.7
Q ss_pred CeEEEEEecc-CCc--h-hhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCC
Q 012331 297 PVRIAMVGKY-TGL--S-DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (466)
Q Consensus 297 ~v~IaIVgkY-~g~--~-Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGf 372 (466)
..+|++|+ | .+. . +...|+.++|++.|+++.+ ++-.+- ++ .+..+.+.++|+|++|||-
T Consensus 27 ~~~i~~Ip-~As~~~~~~~~~~s~~~a~~~lG~~v~~------~~i~~~-------~~---~~~~~~l~~ad~I~l~GG~ 89 (206)
T 3l4e_A 27 GKTVTFIP-TASTVEEVTFYVEAGKKALESLGLLVEE------LDIATE-------SL---GEITTKLRKNDFIYVTGGN 89 (206)
T ss_dssp TCEEEEEC-GGGGGCSCCHHHHHHHHHHHHTTCEEEE------CCTTTS-------CH---HHHHHHHHHSSEEEECCSC
T ss_pred CCEEEEEC-CCCCCCCHHHHHHHHHHHHHHcCCeEEE------EEecCC-------Ch---HHHHHHHHhCCEEEECCCC
Confidence 36999998 7 331 1 2557899999999997653 321110 11 1122567899999999953
Q ss_pred CCC-----CchhHHHHHHHHHHcCCcEEEehHHHHHHH
Q 012331 373 GNR-----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (466)
Q Consensus 373 G~r-----g~eG~i~aIk~are~~iPvLGICLGmQlla 405 (466)
-.. ...|..++++.+.++++|++|||.|||+|+
T Consensus 90 ~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~ 127 (206)
T 3l4e_A 90 TFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITS 127 (206)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhc
Confidence 222 125788899999999999999999999997
No 37
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=98.53 E-value=3e-08 Score=95.17 Aligned_cols=90 Identities=16% Similarity=0.169 Sum_probs=64.1
Q ss_pred CeEEEEEeccC---Cchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCC
Q 012331 297 PVRIAMVGKYT---GLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (466)
Q Consensus 297 ~v~IaIVgkY~---g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGf 372 (466)
..+|++|+ |. +..| +..|+.++|+..|+++.+ +.. .+ + ..+.+.++|+|++|||-
T Consensus 31 ~~~i~iI~-~a~~~~~~~~~~~~~~~al~~lG~~~~~------v~~--~~------d------~~~~l~~ad~I~lpGG~ 89 (229)
T 1fy2_A 31 RRSAVFIP-FAGVTQTWDEYTDKTAEVLAPLGVNVTG------IHR--VA------D------PLAAIEKAEIIIVGGGN 89 (229)
T ss_dssp CCEEEEEC-TTCCSSCHHHHHHHHHHHHGGGTCEEEE------TTS--SS------C------HHHHHHHCSEEEECCSC
T ss_pred CCeEEEEE-CCCCCCCHHHHHHHHHHHHHHCCCEEEE------Eec--cc------c------HHHHHhcCCEEEECCCc
Confidence 46899998 73 2223 457899999999986543 211 00 1 12568889999999953
Q ss_pred CCC-----CchhHHHHHHHHHHcCCcEEEehHHHHHHHHH
Q 012331 373 GNR-----GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (466)
Q Consensus 373 G~r-----g~eG~i~aIk~are~~iPvLGICLGmQllaia 407 (466)
-.. ...|..++++.+.++++|++|||.|||+|+-.
T Consensus 90 ~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~~~ 129 (229)
T 1fy2_A 90 TFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLACPT 129 (229)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTSSB
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhccc
Confidence 222 11467888998888899999999999999853
No 38
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=98.50 E-value=9.2e-08 Score=111.64 Aligned_cols=91 Identities=19% Similarity=0.227 Sum_probs=61.9
Q ss_pred CCeEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCC--
Q 012331 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG-- 373 (466)
Q Consensus 296 ~~v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG-- 373 (466)
.++||+|++ |-+. .+-.++.+||+++|+++.+ .|+. ++.. .+ +.|.++|+|++||||.
T Consensus 1046 ~~pkVaIi~-~~G~-N~~~~~~~A~~~aG~~~~~----v~~~--dl~~-----~~-------~~l~~~d~lvlPGGfSyg 1105 (1303)
T 3ugj_A 1046 ARPKVAVLR-EQGV-NSHVEMAAAFHRAGFDAID----VHMS--DLLG-----GR-------IGLGNFHALVACGGFSYG 1105 (1303)
T ss_dssp CCCEEEEEE-CTTC-CCHHHHHHHHHHTTCEEEE----EEHH--HHHT-----TS-------CCGGGCSEEEECCSCGGG
T ss_pred CCCEEEEEe-cCCc-CCHHHHHHHHHHhCCceEE----Eeec--cccc-----Cc-------ccHhhCCEEEECCCCcch
Confidence 357999999 7332 2557899999999998764 2331 1100 01 3577899999999974
Q ss_pred CC-Cc-----------hhHHHHHHHHH-HcCCcEEEehHHHHHHHH
Q 012331 374 NR-GV-----------QGKILAAKYAR-EHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 374 ~r-g~-----------eG~i~aIk~ar-e~~iPvLGICLGmQllai 406 (466)
|. +. .++.++++.+. +.++|+||||+|||+|+-
T Consensus 1106 D~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~e 1151 (1303)
T 3ugj_A 1106 DVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSN 1151 (1303)
T ss_dssp GTTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHHT
T ss_pred hhhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHHH
Confidence 41 10 23445566543 578999999999999994
No 39
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=98.24 E-value=1.9e-06 Score=86.33 Aligned_cols=111 Identities=14% Similarity=0.208 Sum_probs=62.9
Q ss_pred CCeEEEEEeccCCchhhH-HHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHH--ccCCCEEEecCCC
Q 012331 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGF 372 (466)
Q Consensus 296 ~~v~IaIVgkY~g~~Day-~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~--L~~~DGIllPGGf 372 (466)
+++||||+. .......| ..+.+.|......+.+ .+..+.+........+.-..-|.. +.. ..++||+||.|||
T Consensus 34 rplkI~ILn-lmp~k~~te~qf~rlL~~~~~qv~v--~~~~~~~~~~~~~~~~hl~~~y~~-f~~~~~~~~DglIITGap 109 (301)
T 2vdj_A 34 RALKIAILN-LMPTKQETEAQLLRLIGNTPLQLDV--HLLHMESHLSRNVAQEHLTSFYKT-FRDIENEKFDGLIITGAP 109 (301)
T ss_dssp CCEEEEEEC-CCSSHHHHHHHHHHHHTCSSSCEEE--EEECCCC------------CCEEC-HHHHTTSCEEEEEECCCT
T ss_pred CCceEEEEe-CCCCcCchHHHHHHHhcCCCCcEEE--EEEeccCCCCCCccHHHHhhcccC-cccccccccCEEEECCCC
Confidence 468999997 33322233 3456666555554443 233332212111000000001111 122 3679999999998
Q ss_pred CCC-------CchhHHHHHHHHHHcCCcEEEehHHHHHHHHHhcc
Q 012331 373 GNR-------GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFAR 410 (466)
Q Consensus 373 G~r-------g~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr 410 (466)
-.. -+....+.+++++++++|+||||+|+|+++.++++
T Consensus 110 ~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~~G 154 (301)
T 2vdj_A 110 VETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYG 154 (301)
T ss_dssp TTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHC
T ss_pred CcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHHhCC
Confidence 432 23456778899999999999999999996555555
No 40
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=98.24 E-value=2.9e-06 Score=85.42 Aligned_cols=111 Identities=12% Similarity=0.158 Sum_probs=65.2
Q ss_pred CCeEEEEEeccCCchhhH-HHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHH--ccCCCEEEecCCC
Q 012331 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGF 372 (466)
Q Consensus 296 ~~v~IaIVgkY~g~~Day-~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~--L~~~DGIllPGGf 372 (466)
+++||||+. .......| ..+.+.|......+.+ .+..+.+........+.-..-|. .+.. ..++||+||.|||
T Consensus 46 rplkI~ILn-lmp~k~~te~qf~rlL~~~~~qv~v--~~~~~~~~~~~~~~~~hl~~~y~-~f~~~~~~~~DglIITGsP 121 (312)
T 2h2w_A 46 RPLEILILN-LMPDKIKTEIQLLRLLGNTPLQVNV--TLLYTETHKPKHTPIEHILKFYT-TFSAVKDRKFDGFIITGAP 121 (312)
T ss_dssp CCEEEEEEC-CCSSHHHHHHHHHHHHHSSSSCEEE--EEECCSCCCCCSSCHHHHHHHCB-CGGGTTTCCEEEEEECCCS
T ss_pred CCceEEEEe-CCCCcCchHHHHHHHhcCCCCcEEE--EEEEccCCCCCCccHHHHhhccC-CcccccccCcCEEEECCCC
Confidence 468999997 33322233 3466777766655543 23333222211100000000000 0122 3579999999998
Q ss_pred CCC-------CchhHHHHHHHHHHcCCcEEEehHHHHHHHHHhcc
Q 012331 373 GNR-------GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFAR 410 (466)
Q Consensus 373 G~r-------g~eG~i~aIk~are~~iPvLGICLGmQllaia~Gr 410 (466)
-.. -+....+.+++++++++|+||||+|+|+++.++++
T Consensus 122 ~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~G 166 (312)
T 2h2w_A 122 VELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFYG 166 (312)
T ss_dssp CTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHC
T ss_pred CCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHhCC
Confidence 432 23456778899999999999999999996666665
No 41
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=97.88 E-value=4.8e-05 Score=70.35 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=64.9
Q ss_pred CeEEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCC---cccc----cccCCchhhHHHHHH--ccCCCEE
Q 012331 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD---LEDA----TEKENPDAYKAAWKL--LKGADGI 366 (466)
Q Consensus 297 ~v~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~---l~~~----~~~~~p~~y~~~~~~--L~~~DGI 366 (466)
..+|+++- +.++.+ ......+.|+.+|+++.+ +..+. +... ....+. ..+. ..++|+|
T Consensus 23 ~~kV~ill-~~g~~~~e~~~~~~~l~~ag~~v~~------vs~~~~~~v~~~~g~~~v~~~~-----~l~~~~~~~~D~l 90 (193)
T 1oi4_A 23 SKKIAVLI-TDEFEDSEFTSPADEFRKAGHEVIT------IEKQAGKTVKGKKGEASVTIDK-----SIDEVTPAEFDAL 90 (193)
T ss_dssp CCEEEEEC-CTTBCTHHHHHHHHHHHHTTCEEEE------EESSTTCEEECTTSSCEEECCE-----EGGGCCGGGCSEE
T ss_pred CCEEEEEE-CCCCCHHHHHHHHHHHHHCCCEEEE------EECCCCcceecCCCCeEEECCC-----ChHHCCcccCCEE
Confidence 45788886 666654 456788999999977654 22211 1000 000000 0112 2468999
Q ss_pred EecCCCCCC---CchhHHHHHHHHHHcCCcEEEehHHHHHHHHH
Q 012331 367 LVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (466)
Q Consensus 367 llPGGfG~r---g~eG~i~aIk~are~~iPvLGICLGmQllaia 407 (466)
+||||+|.. ......+.++.+.++++|++|||.|.|+|+-+
T Consensus 91 ivpGG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~a 134 (193)
T 1oi4_A 91 LLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISA 134 (193)
T ss_dssp EECCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHH
T ss_pred EECCCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHC
Confidence 999997642 33567888999999999999999999999854
No 42
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=97.65 E-value=0.00016 Score=64.66 Aligned_cols=100 Identities=14% Similarity=0.253 Sum_probs=63.8
Q ss_pred CeEEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCC--cccc-cccCCchhhHHHHHHc--cCCCEEEecC
Q 012331 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD--LEDA-TEKENPDAYKAAWKLL--KGADGILVPG 370 (466)
Q Consensus 297 ~v~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~--l~~~-~~~~~p~~y~~~~~~L--~~~DGIllPG 370 (466)
.++|+++- |.++.+ ......+.|+.+|+++.+ +..+. +... ...-.+ +...+.+ .++|.|+|||
T Consensus 2 ~~ki~il~-~~g~~~~e~~~~~~~l~~ag~~v~~------vs~~~~~v~~~~g~~i~~---~~~~~~~~~~~~D~livpG 71 (168)
T 3l18_A 2 SMKVLFLS-ADGFEDLELIYPLHRIKEEGHEVYV------ASFQRGKITGKHGYSVNV---DLTFEEVDPDEFDALVLPG 71 (168)
T ss_dssp CCEEEEEC-CTTBCHHHHHHHHHHHHHTTCEEEE------EESSSEEEECTTSCEEEE---CEEGGGCCGGGCSEEEECC
T ss_pred CcEEEEEe-CCCccHHHHHHHHHHHHHCCCEEEE------EECCCCEEecCCCcEEec---cCChhHCCHhhCCEEEECC
Confidence 35788886 766654 344678899999877654 22211 0000 000000 0001222 3589999999
Q ss_pred CCCCC---CchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 371 GFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 371 GfG~r---g~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
|++.. ......+.++.+.++++|+.+||-|.++|+-
T Consensus 72 G~~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~ 110 (168)
T 3l18_A 72 GKAPEIVRLNEKAVMITRRMFEDDKPVASICHGPQILIS 110 (168)
T ss_dssp BSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHH
T ss_pred CcCHHHhccCHHHHHHHHHHHHCCCEEEEECHhHHHHHH
Confidence 98642 3456778899999999999999999999884
No 43
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=96.95 E-value=0.0039 Score=60.18 Aligned_cols=172 Identities=15% Similarity=0.151 Sum_probs=95.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCcc----cc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNY----ER 76 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg~e~dlDlg~y----er 76 (466)
+|.||||| .=++.||=++++.|.+.|+.+|++|...| |.+.|-. ..+| .|-|...+ .+
T Consensus 21 ~k~i~Itg-T~t~vGKT~vs~gL~~~L~~~G~~V~~fK-------------Pv~~g~~--~~~~--~~~D~~~~~~~~~~ 82 (242)
T 3qxc_A 21 GHMLFISA-TNTNAGKTTCARLLAQYCNACGVKTILLK-------------PIETGVN--DAIN--HSSDAHLFLQDNRL 82 (242)
T ss_dssp CEEEEEEE-SSTTSSHHHHHHHHHHHHHHTTCCEEEEC-------------CEECSCC--TTTC--CCSHHHHHHHHHHT
T ss_pred CcEEEEEe-CCCCCcHHHHHHHHHHHHHhCCCceEEEe-------------eeecCCc--ccCC--CCchHHHHHHHHHH
Confidence 47899986 56999999999999999999999999988 2222210 0001 22233333 34
Q ss_pred cc-CCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc-
Q 012331 77 FM-DIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI- 154 (466)
Q Consensus 77 f~-~~~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdi- 154 (466)
+. +.....-+-++--.-.+--+..++.|.+ +. ---++|++.+.+.+ .++|++|||==|-+.+.
T Consensus 83 ~~~g~~~~~~~p~~~~~p~sp~~aa~~~g~~--~~-----i~~~~I~~~~~~l~--------~~~D~vlIEGagGl~~pl 147 (242)
T 3qxc_A 83 LDRSLTLKDISFYRYHKVSAPLIAQQEEDPN--AP-----IDTDNLTQRLHNFT--------KTYDLVIVEGAGGLCVPI 147 (242)
T ss_dssp TCTTCCHHHHCCEECSSSSCHHHHHHHHCTT--CC-----CCHHHHHHHHHHGG--------GTCSEEEEECCSCTTCBS
T ss_pred HhCCCChHHeeeEEECCCCChHHHHHHcCCC--Cc-----CCHHHHHHHHHHHH--------hcCCEEEEECCCCccccc
Confidence 33 2221000000000000012223334432 11 13477888888875 36899999954444441
Q ss_pred -CcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecC-CCccccCchhhhHHHhhcCCCcccEEEEecCC
Q 012331 155 -ESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNV-VGEQKTKPTQHSVRGLRGQGLTPNILACRSTV 220 (466)
Q Consensus 155 -Es~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~-~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~~ 220 (466)
+..-..+-++++... ++.| ... .|- -.-+.-+++.|++.|+. .++|+-...
T Consensus 148 ~~~~~~adlA~~l~~p-----VILV-------~~~~lg~--i~~~~lt~~~l~~~g~~-~GvIlN~v~ 200 (242)
T 3qxc_A 148 TLEENMLDFALKLKAK-----MLLI-------SHDNLGL--INDCLLNDFLLKSHQLD-YKIAINLKG 200 (242)
T ss_dssp SSSCBHHHHHHHHTCE-----EEEE-------ECCSTTH--HHHHHHHHHHHHTSSSC-EEEEECCCT
T ss_pred cccchHHHHHHHcCCC-----EEEE-------EcCCCcH--HHHHHHHHHHHHhCCCC-EEEEEeCCC
Confidence 334445666666532 2221 211 121 22566777888999999 999986543
No 44
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=96.95 E-value=0.0013 Score=60.49 Aligned_cols=99 Identities=14% Similarity=0.117 Sum_probs=62.7
Q ss_pred eEEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCC---cccc-cccCCchhhHHHHHHc---cCCCEEEec
Q 012331 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD---LEDA-TEKENPDAYKAAWKLL---KGADGILVP 369 (466)
Q Consensus 298 v~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~---l~~~-~~~~~p~~y~~~~~~L---~~~DGIllP 369 (466)
.+|+++- |.++.+ ......+.|+.+|+++.+ +..+. +... ...-.|. ...+.+ .++|.|+||
T Consensus 4 ~~v~ill-~~g~~~~e~~~~~~~l~~ag~~v~~------vs~~~~~~v~~~~g~~v~~d---~~l~~~~~~~~~D~livp 73 (197)
T 2rk3_A 4 KRALVIL-AKGAEEMETVIPVDVMRRAGIKVTV------AGLAGKDPVQCSRDVVICPD---ASLEDAKKEGPYDVVVLP 73 (197)
T ss_dssp CEEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEE------EETTCSSCEECTTSCEECCS---EEHHHHHTTCCCSEEEEC
T ss_pred CEEEEEE-CCCCcHHHHHHHHHHHHHCCCEEEE------EEcCCCCccccCCCCEEeCC---cCHHHcCCccCCCEEEEC
Confidence 3677775 666665 344578899999976654 22211 1000 0000010 011333 679999999
Q ss_pred CCCCCC----CchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 370 GGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 370 GGfG~r----g~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
||++.. .....++.++.+.++++|+.+||-|-++|+-
T Consensus 74 GG~~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~ 114 (197)
T 2rk3_A 74 GGNLGAQNLSESAAVKEILKEQENRKGLIATICAGPTALLA 114 (197)
T ss_dssp CCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred CCchhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 997432 2345778889999999999999999998884
No 45
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=96.94 E-value=0.0023 Score=58.19 Aligned_cols=100 Identities=19% Similarity=0.221 Sum_probs=62.2
Q ss_pred CeEEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCCccc------c--cccCCchhhHHHHHHc--cCCCE
Q 012331 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLED------A--TEKENPDAYKAAWKLL--KGADG 365 (466)
Q Consensus 297 ~v~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~------~--~~~~~p~~y~~~~~~L--~~~DG 365 (466)
..+|+++- |.++.+ ......+.|+.+|+++.+. ......+.. . ....+. ..+.+ .++|.
T Consensus 9 ~~~v~il~-~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~v~~~~~~~~~g~~v~~~~-----~~~~~~~~~~D~ 78 (190)
T 2vrn_A 9 GKKIAILA-ADGVEEIELTSPRAAIEAAGGTTELI----SLEPGEIQSMKGDIEPQEKYRVDH-----VVSEVQVSDYDG 78 (190)
T ss_dssp TCEEEEEC-CTTCBHHHHHHHHHHHHHTTCEEEEE----ESSSSEEEEEETTTEEEEEEECSE-----EGGGCCGGGCSE
T ss_pred CCEEEEEe-CCCCCHHHHHHHHHHHHHCCCEEEEE----ecCCCccccccccccCCcEEeCCC-----ChhhCChhhCCE
Confidence 35888885 766654 3445678899998776531 111100100 0 000000 01222 46899
Q ss_pred EEecCCCCC----CCchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 366 ILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 366 IllPGGfG~----rg~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
|+||||++. +.....++.++.+.++++|+.+||-|-++|+-
T Consensus 79 livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~ 123 (190)
T 2vrn_A 79 LLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSE 123 (190)
T ss_dssp EEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHH
T ss_pred EEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHh
Confidence 999999743 23456788899999999999999999998884
No 46
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=96.82 E-value=0.0034 Score=56.61 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=69.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg~e~dlDlg~yerf~~~ 80 (466)
||.|.|+++ -.|.||=.+|+.++..|..+|++|.++.+||.-|.- .|+..
T Consensus 1 M~vi~v~s~-kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~-----------------------------~~~~~ 50 (206)
T 4dzz_A 1 MKVISFLNP-KGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLT-----------------------------NWSKA 50 (206)
T ss_dssp CEEEEECCS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-----------------------------HHHTT
T ss_pred CeEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHH-----------------------------HHHhc
Confidence 788888876 788999999999999999999999999999643321 01100
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 012331 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (466)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs~pf~ 160 (466)
. .. .+.++|--.+++.+.+..+. ..+|++||+.++..++ ...
T Consensus 51 ~---~~-----------------------~~~~~~~~~~~l~~~l~~l~--------~~yD~viiD~~~~~~~----~~~ 92 (206)
T 4dzz_A 51 G---KA-----------------------AFDVFTAASEKDVYGIRKDL--------ADYDFAIVDGAGSLSV----ITS 92 (206)
T ss_dssp S---CC-----------------------SSEEEECCSHHHHHTHHHHT--------TTSSEEEEECCSSSSH----HHH
T ss_pred C---CC-----------------------CCcEEecCcHHHHHHHHHhc--------CCCCEEEEECCCCCCH----HHH
Confidence 0 00 04566665678888888874 3689999999998744 344
Q ss_pred HHHHH
Q 012331 161 EALGQ 165 (466)
Q Consensus 161 ea~rq 165 (466)
.+++.
T Consensus 93 ~~l~~ 97 (206)
T 4dzz_A 93 AAVMV 97 (206)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 47
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=96.75 E-value=0.0017 Score=60.30 Aligned_cols=100 Identities=14% Similarity=0.117 Sum_probs=61.3
Q ss_pred EEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCC---Ccccc-cccCCchhhHHHHHHc--cCCCEEEecCC
Q 012331 299 RIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPAC---DLEDA-TEKENPDAYKAAWKLL--KGADGILVPGG 371 (466)
Q Consensus 299 ~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~---~l~~~-~~~~~p~~y~~~~~~L--~~~DGIllPGG 371 (466)
+|+++- |.++.+ ......+.|+.+|+++.+ ...... .+... ...-.+ +...+.+ .++|.|+||||
T Consensus 4 kV~ill-~~g~~~~e~~~~~~~l~~ag~~v~~----vs~~~~~~~~v~~~~g~~v~~---~~~l~~~~~~~~D~livpGG 75 (205)
T 2ab0_A 4 SALVCL-APGSEETEAVTTIDLLVRGGIKVTT----ASVASDGNLAITCSRGVKLLA---DAPLVEVADGEYDVIVLPGG 75 (205)
T ss_dssp EEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEE----EECSSTTCCEEECTTSCEEEC---SEEHHHHTTSCCSEEEECCC
T ss_pred EEEEEE-cCCCcHHHHHHHHHHHHHCCCEEEE----EeCCCCCCceeecCCCeEEec---CCCHHHCCcccCCEEEECCC
Confidence 677775 656554 344567899999977654 111111 01000 000000 0011233 57999999999
Q ss_pred CCCC----CchhHHHHHHHHHHcCCcEEEehHHH-HHHHH
Q 012331 372 FGNR----GVQGKILAAKYAREHRIPYLGICLGM-QVAVI 406 (466)
Q Consensus 372 fG~r----g~eG~i~aIk~are~~iPvLGICLGm-Qllai 406 (466)
++.. .....++.++.+.++++|+.+||-|- ++|+-
T Consensus 76 ~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~ 115 (205)
T 2ab0_A 76 IKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVP 115 (205)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTT
T ss_pred cccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHH
Confidence 7532 23457788899999999999999999 88883
No 48
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=96.72 E-value=0.0023 Score=58.45 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=37.7
Q ss_pred CCCEEEecCCCCC--CCchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 362 GADGILVPGGFGN--RGVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 362 ~~DGIllPGGfG~--rg~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
++|.|+||||++. +.....++.++.+.++++|+.+||-|-++|+-
T Consensus 63 ~~D~livpGG~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~ 109 (188)
T 2fex_A 63 DIDALVIPGGLSWEKGTAADLGGLVKRFRDRDRLVAGICAAASALGG 109 (188)
T ss_dssp TCSEEEECCBSHHHHTCCCCCHHHHHHHHHTTCEEEEETHHHHHHHH
T ss_pred cCCEEEECCCCcccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 6899999999764 23345678889999999999999999998874
No 49
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=96.64 E-value=0.0047 Score=56.45 Aligned_cols=98 Identities=12% Similarity=0.126 Sum_probs=60.3
Q ss_pred EEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCC---cccc-cccCCchhhHHHHHHc--cCCCEEEecCC
Q 012331 299 RIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD---LEDA-TEKENPDAYKAAWKLL--KGADGILVPGG 371 (466)
Q Consensus 299 ~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~---l~~~-~~~~~p~~y~~~~~~L--~~~DGIllPGG 371 (466)
||+++= +.++.+ -.....+.|+.+|+++.+ +..+. +... ...-.| +...+.+ ..+|.|+||||
T Consensus 7 kv~ill-~~g~~~~e~~~~~~~l~~ag~~v~~------~s~~~~~~v~~~~g~~i~~---d~~l~~~~~~~~D~livpGG 76 (190)
T 4e08_A 7 SALVIL-APGAEEMEFIIAADVLRRAGIKVTV------AGLNGGEAVKCSRDVQILP---DTSLAQVASDKFDVVVLPGG 76 (190)
T ss_dssp EEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEE------EESSSSSCEECTTSCEEEC---SEETGGGTTCCCSEEEECCC
T ss_pred EEEEEE-CCCchHHHHHHHHHHHHHCCCEEEE------EECCCCcceecCCCcEEEC---CCCHHHCCcccCCEEEECCC
Confidence 677664 556554 344567999999977654 22211 1000 000000 0001222 36899999999
Q ss_pred CC-CC---CchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 372 FG-NR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 372 fG-~r---g~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
++ .. .....++.++.+.++++|+.+||-|-++|+-
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La~ 115 (190)
T 4e08_A 77 LGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAK 115 (190)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred ChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 53 22 2345778899999999999999999998874
No 50
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=96.63 E-value=0.0028 Score=59.32 Aligned_cols=49 Identities=6% Similarity=-0.160 Sum_probs=40.1
Q ss_pred HHccCCCEEEecCCCCCC-----CchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 358 KLLKGADGILVPGGFGNR-----GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 358 ~~L~~~DGIllPGGfG~r-----g~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
+.+.++|.|+||||.+.. ..+..++.++.+.++++++.+||-|-.+|+-
T Consensus 70 ~~~~~~D~livpGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~ 123 (209)
T 3er6_A 70 QSFDFTNILIIGSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAK 123 (209)
T ss_dssp GGCSCCSEEEECCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred cccCCCCEEEECCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHH
Confidence 345679999999998642 2456788899999999999999999988874
No 51
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=96.61 E-value=0.0052 Score=57.51 Aligned_cols=45 Identities=18% Similarity=0.084 Sum_probs=38.1
Q ss_pred CCCEEEecCCCCCC--CchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 362 GADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 362 ~~DGIllPGGfG~r--g~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
.+|.|+||||.+.+ .....++.++.+.++++|+.+||-|-.+|+-
T Consensus 74 ~~D~livpGG~~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~ 120 (212)
T 3efe_A 74 SKDLLILPGGTTWSEEIHQPILERIGQALKIGTIVAAICGATDALAN 120 (212)
T ss_dssp TTCEEEECCCSCTTSGGGHHHHHHHHHHHHHTCEEEEETHHHHHHHH
T ss_pred CCCEEEECCCCccccccCHHHHHHHHHHHHCCCEEEEEcHHHHHHHH
Confidence 79999999998754 3345788899998999999999999988774
No 52
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=96.60 E-value=0.01 Score=55.18 Aligned_cols=46 Identities=20% Similarity=0.088 Sum_probs=39.5
Q ss_pred ccCCCEEEecCCCCCC--CchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 360 LKGADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 360 L~~~DGIllPGGfG~r--g~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
..++|.|+||||++.. . +..++.++.+.++++++.+||-|-.+|+-
T Consensus 69 ~~~~D~livpGG~~~~~~~-~~l~~~l~~~~~~g~~iaaIC~G~~~La~ 116 (202)
T 3gra_A 69 LKELDLLVVCGGLRTPLKY-PELDRLLNDCAAHGMALGGLWNGAWFLGR 116 (202)
T ss_dssp GTTCSEEEEECCTTCCSCC-TTHHHHHHHHHHHTCEEEEETTHHHHHHH
T ss_pred CCCCCEEEEeCCCchhhcc-HHHHHHHHHHHhhCCEEEEECHHHHHHHH
Confidence 4578999999998764 4 67788899999999999999999998874
No 53
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=96.60 E-value=0.007 Score=57.51 Aligned_cols=170 Identities=15% Similarity=0.196 Sum_probs=93.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg~e~dlDlg~yerf~~~ 80 (466)
||-||||| .-|+.||=++++.|.+.|+.+|++|...| |.|+|-.+ .+|| ..|-|.-. +..+.
T Consensus 4 mk~i~Itg-t~t~vGKT~vt~~L~~~l~~~G~~V~~~K-------------Pv~~g~~~-~~~~-~~~~D~~~--~~~~~ 65 (228)
T 3of5_A 4 MKKFFIIG-TDTEVGKTYISTKLIEVCEHQNIKSLCLK-------------PVASGQSQ-FSEL-CEDVESIL--NAYKH 65 (228)
T ss_dssp CEEEEEEE-SSSSSCHHHHHHHHHHHHHHTTCCEEEEC-------------SEEESBCS-SSSS-BHHHHHHH--HHTTT
T ss_pred CcEEEEEe-CCCCCCHHHHHHHHHHHHHHCCCeeEEec-------------ceeecCcc-CCCC-CChHHHHH--HhcCC
Confidence 68899986 56999999999999999999999999966 45566322 1222 21112211 22222
Q ss_pred CCCCCCcccchHhh----HHHHhhhhcCCCCCCeeEEcccchHHHHHHHHH-HhcccCCCCCCCCcEEEEeeCccccc--
Q 012331 81 KLTRDNNITTGKIY----QSVIDKERKGDYLGKTVQVVPHITDEIQDWIER-VAMIPVDGKEGPVDVCVIELGGTIGD-- 153 (466)
Q Consensus 81 ~l~~~~n~t~gkiy----~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~-~~~~pvd~~~~~~d~~i~EigGtvGd-- 153 (466)
.++.+ ++ ..-.| +--+..++.|. +---++|++.+.+ ++ .++|++|||=-|-+.+
T Consensus 66 ~~~~~-~~-~~~~~~~p~sp~~aa~~~~~---------~i~~~~i~~~~~~~l~--------~~~D~vlIEgaggl~~p~ 126 (228)
T 3of5_A 66 KFTAA-EI-NLISFNQAVAPHIIAAKTKV---------DISIENLKQFIEDKYN--------QDLDILFIEGAGGLLTPY 126 (228)
T ss_dssp SSCHH-HH-CSEEESSSSCHHHHHHHTTC---------CCCHHHHHHHHHGGGG--------SSCSEEEEEEEEETTCBS
T ss_pred CCChh-hE-EEEEECCCCCHHHHHHHcCC---------CCCHHHHHHHHHHHHH--------ccCCEEEEECCCcccccc
Confidence 21100 00 00001 01111122221 1123678888877 64 3689999995443332
Q ss_pred cCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCchhhhHHHhhcCCCcccEEEEecCC
Q 012331 154 IESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTV 220 (466)
Q Consensus 154 iEs~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~~ 220 (466)
-+..-..+-++++... ++.| --.+ .+- -.-+..+++.++..|+...++|+-...
T Consensus 127 ~~~~~~adla~~l~~p-----viLV-----~~~~-~~~--i~~~~~~~~~l~~~~~~i~GvIlN~~~ 180 (228)
T 3of5_A 127 SDHTTQLDLIKALQIP-----VLLV-----SAIK-VGC--INHTLLTINELNRHNIKLAGWIANCND 180 (228)
T ss_dssp SSSCBHHHHHHHHTCC-----EEEE-----EECS-TTH--HHHHHHHHHHHHHTTCCEEEEEEEECC
T ss_pred ccchhHHHHHHHcCCC-----EEEE-----EcCC-cch--HHHHHHHHHHHHhCCCcEEEEEEECcC
Confidence 1233445556665422 2221 1111 122 234666777888999999999886543
No 54
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=96.30 E-value=0.0035 Score=57.62 Aligned_cols=46 Identities=20% Similarity=0.138 Sum_probs=38.8
Q ss_pred cCCCEEEecCCCCCC---CchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 361 ~~~DGIllPGGfG~r---g~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
.++|+|++|||+|.. ..+...+.++.+.++++|+.+||-|-++|+-
T Consensus 68 ~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~~~La~ 116 (177)
T 4hcj_A 68 VEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGVVIMAN 116 (177)
T ss_dssp GGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred hHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEecccHHHHHH
Confidence 468999999999864 3356788899999999999999999988773
No 55
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=96.16 E-value=0.009 Score=56.88 Aligned_cols=101 Identities=13% Similarity=0.107 Sum_probs=61.5
Q ss_pred eEEEEEeccCCchh-hHHHHHHHHHH-cCCceeEEeEEEEeeCCCcccc-cccCCchhhHHHHHHccCCCEEEecCCCCC
Q 012331 298 VRIAMVGKYTGLSD-AYLSILKALLH-ASVDLRKKLVIDWIPACDLEDA-TEKENPDAYKAAWKLLKGADGILVPGGFGN 374 (466)
Q Consensus 298 v~IaIVgkY~g~~D-ay~SI~~aL~~-aG~~~~v~v~i~~i~s~~l~~~-~~~~~p~~y~~~~~~L~~~DGIllPGGfG~ 374 (466)
.+|+++- |.++.+ ......+.|.. .++++.+ .+.+...+... ...-.| +...+.+.++|.|+||||+|.
T Consensus 6 ~~V~ill-~~gf~~~e~~~p~evl~~~~~~~v~~----vs~~~~~V~~~~G~~v~~---d~~l~~~~~~D~livpGG~g~ 77 (231)
T 3noq_A 6 VQIGFLL-FPEVQQLDLTGPHDVLASLPDVQVHL----IWKEPGPVVASSGLVLQA---TTSFADCPPLDVICIPGGTGV 77 (231)
T ss_dssp EEEEEEC-CTTCCHHHHHHHHHHHTTSTTEEEEE----EESSSEEEECTTSCEEEE---CEETTTCCCCSEEEECCSTTH
T ss_pred EEEEEEE-eCCCcHHHHHHHHHHHHcCCCCEEEE----EECCCCcEEcCCCCEEec---ccChhHCCcCCEEEECCCCCh
Confidence 5788886 767665 33456777876 4544332 22211111000 000000 001123457899999999876
Q ss_pred C---CchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 375 R---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 375 r---g~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
. ..+..++.++.+.++++++.+||-|-.+|+-
T Consensus 78 ~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La~ 112 (231)
T 3noq_A 78 GALMEDPQALAFIRQQAARARYVTSVSTGSLVLGA 112 (231)
T ss_dssp HHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 3 3456788899999999999999999988773
No 56
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=96.09 E-value=0.015 Score=56.38 Aligned_cols=168 Identities=18% Similarity=0.215 Sum_probs=90.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg~e~dlDlg~yerf~~~ 80 (466)
||-||||| .=|+.||=++++.|.+.|+.+|++|...| |.++|-. .|+ -|.....+..+.
T Consensus 26 m~~i~Itg-t~t~vGKT~vt~gL~~~l~~~G~~V~~fK-------------Pv~~g~~---~~~----~D~~~~~~~~g~ 84 (251)
T 3fgn_A 26 MTILVVTG-TGTGVGKTVVCAALASAARQAGIDVAVCK-------------PVQTGTA---RGD----DDLAEVGRLAGV 84 (251)
T ss_dssp CEEEEEEE-SSTTSCHHHHHHHHHHHHHHTTCCEEEEE-------------EEECCGG---GTC----CHHHHHHHHHCC
T ss_pred CCEEEEEe-CCCCCcHHHHHHHHHHHHHHCCCeEEEEe-------------eeecCCC---CCC----HHHHHHHHHcCC
Confidence 57888885 67999999999999999999999999988 3333310 111 222222333322
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc--Cc-c
Q 012331 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI--ES-M 157 (466)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdi--Es-~ 157 (466)
... .+-++--.-.+--+..++.|.. . ---++|++.+.+.+ .++|++|||==|-+.|- +. .
T Consensus 85 ~~~-~~~~~~~~p~sP~~aa~~~~~~---~-----~~~~~i~~~~~~l~--------~~~D~vlIEGagGl~~pl~~~~~ 147 (251)
T 3fgn_A 85 TQL-AGLARYPQPMAPAAAAEHAGMA---L-----PARDQIVRLIADLD--------RPGRLTLVEGAGGLLVELAEPGV 147 (251)
T ss_dssp CEE-EEEEECSSSSCHHHHHHHTTCC---C-----CCHHHHHHHHHTTC--------CTTCEEEEECSSSTTCEEETTTE
T ss_pred CCC-CCCeeECCCCChHHHHHHcCCC---C-----CCHHHHHHHHHHHH--------hcCCEEEEECCCCCcCCcCcccc
Confidence 111 0000000000111122222220 0 11356777777764 47899999954444331 21 3
Q ss_pred hHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCchhhhHHHhhcCCCcccEEEEecC
Q 012331 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRST 219 (466)
Q Consensus 158 pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~ 219 (466)
-..+-++++... +++ | ... +.---.-+.-+++.|+..|+...++|+...
T Consensus 148 ~~adla~~l~~p-----VIL-----V--~~~-~~g~i~~~~lt~~~l~~~g~~i~GvIlN~v 196 (251)
T 3fgn_A 148 TLRDVAVDVAAA-----ALV-----V--VTA-DLGTLNHTKLTLEALAAQQVSCAGLVIGSW 196 (251)
T ss_dssp EHHHHHHHTTCE-----EEE-----E--ECS-STTHHHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred hHHHHHHHcCCC-----EEE-----E--EcC-CCccHHHHHHHHHHHHhCCCCEEEEEEECC
Confidence 334555555422 221 1 221 111122466677788899999999998653
No 57
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=96.04 E-value=0.017 Score=58.81 Aligned_cols=97 Identities=15% Similarity=0.161 Sum_probs=63.4
Q ss_pred eEEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCC------------------ccc-c--cccCCchhhHH
Q 012331 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD------------------LED-A--TEKENPDAYKA 355 (466)
Q Consensus 298 v~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~------------------l~~-~--~~~~~p~~y~~ 355 (466)
.+|+++= +.++.+ -.....+.|+.+|+++.+ +.++. ... . ....+.
T Consensus 206 ~ki~ill-~dg~~~~e~~~~~~~l~~ag~~v~~------vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~----- 273 (396)
T 3uk7_A 206 KRILFLC-GDYMEDYEVKVPFQSLQALGCQVDA------VCPEKKAGDRCPTAIHDFEGDQTYSEKPGHTFALTT----- 273 (396)
T ss_dssp CEEEEEC-CTTEEHHHHHHHHHHHHHHTCEEEE------ECTTCCTTCEECEEEEECCSSSSCEEEECCCEECCS-----
T ss_pred ceEEEEe-cCCCcchhHHHHHHHHHHCCCEEEE------ECCCCCCCcccccccccccccchhhhcCCceeeccC-----
Confidence 4788875 666665 345678999999987764 21110 000 0 000000
Q ss_pred HHHH--ccCCCEEEecCCCCCC---CchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 356 AWKL--LKGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 356 ~~~~--L~~~DGIllPGGfG~r---g~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
..+. ..++|.|+||||++.. .....++.++.+.++++|+.+||-|-++|+-
T Consensus 274 ~~~~~~~~~~D~livpGg~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~ 329 (396)
T 3uk7_A 274 NFDDLVSSSYDALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAA 329 (396)
T ss_dssp CGGGCCGGGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHH
T ss_pred CHHHCCcccCCEEEECCCcchhhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHH
Confidence 0122 2468999999998742 3356788899999999999999999998874
No 58
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=95.91 E-value=0.0059 Score=57.25 Aligned_cols=101 Identities=13% Similarity=0.107 Sum_probs=60.8
Q ss_pred CeEEEEEeccCCchh-hHHHHHHHHHHcC--CceeEE-eEEEEeeCCC-cccccccCCchhhHHHHHHccCCCEEEecCC
Q 012331 297 PVRIAMVGKYTGLSD-AYLSILKALLHAS--VDLRKK-LVIDWIPACD-LEDATEKENPDAYKAAWKLLKGADGILVPGG 371 (466)
Q Consensus 297 ~v~IaIVgkY~g~~D-ay~SI~~aL~~aG--~~~~v~-v~i~~i~s~~-l~~~~~~~~p~~y~~~~~~L~~~DGIllPGG 371 (466)
+.+|+++- |.++.+ ......+.|+.++ +++.+- .+-..+.+.. +.-.. +. ..+....+|.|+||||
T Consensus 4 ~~~V~ill-~~g~~~~e~~~~~~~l~~a~~~~~v~~vs~~~~~V~~~~G~~v~~---d~-----~~~~~~~~D~livpGG 74 (211)
T 3mgk_A 4 SYRIDVLL-FNKFETLDVFGPVEIFGNLQDDFELNFISSDGGLVESSQKVRVET---SL-----YTRDENIEKILFVPGG 74 (211)
T ss_dssp CEEEEEEC-CTTCCHHHHHHHHHHHTTCTTTEEEEEECSSCEEEECTTCCEEEE---BC-----CCCCSSSEEEEEECCS
T ss_pred ceEEEEEE-eCCcchhHHHHHHHHHHhCCCceEEEEEECCCCeEecCCCcEEEe---cc-----chhhCCCCCEEEECCC
Confidence 46888886 767665 3445678888774 333220 0000111111 00000 00 0122334799999999
Q ss_pred CCCC---CchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 372 FGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 372 fG~r---g~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
+|.. .....++.++.+.++++|+.+||-|-.+|+-
T Consensus 75 ~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La~ 112 (211)
T 3mgk_A 75 SGTREKVNDDNFINFIGNMVKESKYIISVCTGSALLSK 112 (211)
T ss_dssp THHHHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHHH
T ss_pred cchhhhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHHh
Confidence 8753 3345788899998999999999999988873
No 59
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=95.84 E-value=0.017 Score=57.46 Aligned_cols=108 Identities=13% Similarity=0.093 Sum_probs=70.5
Q ss_pred HHHHHHHhhhcCCCCCeEEEEEecc-CCchhhHH-HHHHHHHHcCCc-eeEEeEEEEeeCCCcccccccCCchhhHHHHH
Q 012331 282 KEWTSRAEICDGLHEPVRIAMVGKY-TGLSDAYL-SILKALLHASVD-LRKKLVIDWIPACDLEDATEKENPDAYKAAWK 358 (466)
Q Consensus 282 ~~W~~lv~~v~~~~~~v~IaIVgkY-~g~~Day~-SI~~aL~~aG~~-~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~ 358 (466)
.-|+.+++.... ...+|++|. + .+..+.|. ...++|+..|++ +.+ ++-.+.+.. .+| ...+
T Consensus 43 ~i~~~~v~lagg--~~~~I~~Ip-tAs~~~~~~~~~~~~~f~~lG~~~v~~------L~i~~r~~a---~~~----~~~~ 106 (291)
T 3en0_A 43 EILQTFWSRSGG--NDAIIGIIP-SASREPLLIGERYQTIFSDMGVKELKV------LDIRDRAQG---DDS----GYRL 106 (291)
T ss_dssp HHHHHHHHHTTG--GGCEEEEEC-TTCSSHHHHHHHHHHHHHHHCCSEEEE------CCCCSGGGG---GCH----HHHH
T ss_pred HHHHHHHHHcCC--CCCeEEEEe-CCCCChHHHHHHHHHHHHHcCCCeeEE------EEecCcccc---CCH----HHHH
Confidence 346677766642 246999997 5 34444443 467888888984 332 222111100 111 1235
Q ss_pred HccCCCEEEecCCCCCC-----CchhHHHHHHHHHHcC-CcEEEehHHHHHHH
Q 012331 359 LLKGADGILVPGGFGNR-----GVQGKILAAKYAREHR-IPYLGICLGMQVAV 405 (466)
Q Consensus 359 ~L~~~DGIllPGGfG~r-----g~eG~i~aIk~are~~-iPvLGICLGmQlla 405 (466)
.+.++|+|+++||--.+ .-.+..++++.+.+++ +|+.|.|-|.-+|+
T Consensus 107 ~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~ 159 (291)
T 3en0_A 107 FVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMG 159 (291)
T ss_dssp HHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTS
T ss_pred HHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhh
Confidence 67899999999974332 2257889999999988 99999999998876
No 60
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=95.76 E-value=0.014 Score=54.31 Aligned_cols=98 Identities=14% Similarity=0.175 Sum_probs=61.6
Q ss_pred eEEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCC---Ccccc-cccCCchhhHHHHHHc--cCCCEEEecC
Q 012331 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPAC---DLEDA-TEKENPDAYKAAWKLL--KGADGILVPG 370 (466)
Q Consensus 298 v~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~---~l~~~-~~~~~p~~y~~~~~~L--~~~DGIllPG 370 (466)
.+|+++- |.++.+ ......+.|+.+|+++.+ +..+ .+... ...-.+ +...+.+ ..+|.|+|||
T Consensus 10 ~~v~ill-~~g~~~~e~~~~~~~l~~ag~~v~~------vs~~g~~~v~~~~G~~v~~---d~~l~~~~~~~~D~livpG 79 (208)
T 3ot1_A 10 KRILVPV-AHGSEEMETVIIVDTLVRAGFQVTM------AAVGDKLQVQGSRGVWLTA---EQTLEACSAEAFDALALPG 79 (208)
T ss_dssp CEEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEE------EESSSCSEEECTTSCEEEC---SEEGGGCCGGGCSEEEECC
T ss_pred CeEEEEE-CCCCcHHHHHHHHHHHHHCCCEEEE------EEcCCCcceecCCCcEEeC---CCCHHHCCCcCCCEEEECC
Confidence 3788875 666665 344578999999977654 2221 11100 000000 0001222 4689999999
Q ss_pred CCCC----CCchhHHHHHHHHHHcCCcEEEehHHH-HHHH
Q 012331 371 GFGN----RGVQGKILAAKYAREHRIPYLGICLGM-QVAV 405 (466)
Q Consensus 371 GfG~----rg~eG~i~aIk~are~~iPvLGICLGm-Qlla 405 (466)
|.+. +.....++.++.+.++++|+.+||-|- .+|+
T Consensus 80 G~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La 119 (208)
T 3ot1_A 80 GVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFA 119 (208)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTT
T ss_pred CchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHH
Confidence 9753 133567888999999999999999998 7776
No 61
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=95.72 E-value=0.0076 Score=58.18 Aligned_cols=48 Identities=21% Similarity=0.321 Sum_probs=39.9
Q ss_pred cCCCEEEecCCCCC---------------CCchhHHHHHHHHHHcCCcEEEehHHHHHHHHHh
Q 012331 361 KGADGILVPGGFGN---------------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEF 408 (466)
Q Consensus 361 ~~~DGIllPGGfG~---------------rg~eG~i~aIk~are~~iPvLGICLGmQllaia~ 408 (466)
.++|+|+||||+|. +......+.++.+.++++|+.+||-|-++|+-+-
T Consensus 106 ~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~ag 168 (242)
T 3l3b_A 106 EEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALL 168 (242)
T ss_dssp GGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHHH
T ss_pred ccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhC
Confidence 46899999999863 2235678889999999999999999999998665
No 62
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=95.71 E-value=0.026 Score=57.40 Aligned_cols=98 Identities=15% Similarity=0.200 Sum_probs=63.5
Q ss_pred eEEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCC------------------ccc---ccccCCchhhHH
Q 012331 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD------------------LED---ATEKENPDAYKA 355 (466)
Q Consensus 298 v~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~------------------l~~---~~~~~~p~~y~~ 355 (466)
.||+++- +.++.+ -.....+.|+.+|+++.+ +..+. ... .....+.
T Consensus 13 ~kv~ill-~dg~e~~E~~~~~~~l~~ag~~v~~------vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~----- 80 (396)
T 3uk7_A 13 RTVLILC-GDYMEDYEVMVPFQALQAFGITVHT------VCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNA----- 80 (396)
T ss_dssp CEEEEEC-CTTEEHHHHHHHHHHHHHTTCEEEE------ECTTCCTTCEECEEEEECSSSSSCEEEECCCEECCS-----
T ss_pred CeEEEEe-CCCccHHHHHHHHHHHHHCCCEEEE------EcCCCcCCCcccccccccccchhhhhccCceeeccC-----
Confidence 4788875 666665 334568899999987654 22110 000 0000000
Q ss_pred HHHH--ccCCCEEEecCCCCCC---CchhHHHHHHHHHHcCCcEEEehHHHHHHHHH
Q 012331 356 AWKL--LKGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (466)
Q Consensus 356 ~~~~--L~~~DGIllPGGfG~r---g~eG~i~aIk~are~~iPvLGICLGmQllaia 407 (466)
..+. ...+|.|+||||++.. .....++.++.+.++++|+.+||-|-++|+-+
T Consensus 81 ~~~~~~~~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~a 137 (396)
T 3uk7_A 81 TFDEVDLSKYDGLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAAA 137 (396)
T ss_dssp CGGGCCGGGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHT
T ss_pred ChhhcCcccCCEEEECCCcchhhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHhc
Confidence 0122 2568999999998742 33567888999999999999999999998843
No 63
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=95.67 E-value=0.088 Score=49.49 Aligned_cols=41 Identities=29% Similarity=0.453 Sum_probs=37.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
+|.|.|+++ -.|.||=.+|+.|+..|..+|++|.++.+||.
T Consensus 2 ~~~I~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (263)
T 1hyq_A 2 VRTITVASG-KGGTGKTTITANLGVALAQLGHDVTIVDADIT 42 (263)
T ss_dssp CEEEEEEES-SSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CeEEEEECC-CCCCCHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 478888875 57999999999999999999999999999995
No 64
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=95.66 E-value=0.018 Score=59.02 Aligned_cols=100 Identities=15% Similarity=0.217 Sum_probs=63.1
Q ss_pred CeEEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCC---ccc-ccc-cCCchhhHHHHHHc--cCCCEEEe
Q 012331 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD---LED-ATE-KENPDAYKAAWKLL--KGADGILV 368 (466)
Q Consensus 297 ~v~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~---l~~-~~~-~~~p~~y~~~~~~L--~~~DGIll 368 (466)
..+|+++- |.++.+ ......+.|+.+|+++.+ +..+. +.. ... .-.| +...+.+ ..+|.|||
T Consensus 10 mkkV~ILl-~dgf~~~El~~p~dvL~~Ag~~v~v------vS~~~g~~V~ss~G~~~i~~---d~~l~~v~~~~~DaLiV 79 (365)
T 3fse_A 10 KKKVAILI-EQAVEDTEFIIPCNGLKQAGFEVVV------LGSRMNEKYKGKRGRLSTQA---DGTTTEAIASEFDAVVI 79 (365)
T ss_dssp -CEEEEEC-CTTBCHHHHHHHHHHHHHTTCEEEE------EESSSSCCEECTTSCCEECC---SEETTTCCGGGCSEEEE
T ss_pred ceEEEEEE-CCCCcHHHHHHHHHHHHHCCCEEEE------EECCCCceeecCCCceEEeC---CCCHhhCCCcCCCEEEE
Confidence 34788886 767665 344578999999977654 22111 100 000 0000 0001222 25899999
Q ss_pred cCCCCC---CCchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 369 PGGFGN---RGVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 369 PGGfG~---rg~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
|||+|. +.....++.++.+.++++|+.+||-|-.+|+-
T Consensus 80 PGG~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA~ 120 (365)
T 3fse_A 80 PGGMAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLIE 120 (365)
T ss_dssp CCBTHHHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred ECCcchhhccCCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 999864 23456788899999999999999999998873
No 65
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.50 E-value=0.0097 Score=53.40 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=38.1
Q ss_pred cCCCEEEecCC--C-CCCC------chhHHHHHHHHHHcCCcEEEehHHHHHHHHH
Q 012331 361 KGADGILVPGG--F-GNRG------VQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (466)
Q Consensus 361 ~~~DGIllPGG--f-G~rg------~eG~i~aIk~are~~iPvLGICLGmQllaia 407 (466)
.++|.|++||| + +... .....+.++.+.++++|+.+||-|-++|+-+
T Consensus 65 ~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~a 120 (175)
T 3cne_A 65 DEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDFT 120 (175)
T ss_dssp GGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHT
T ss_pred ccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHHC
Confidence 57899999999 6 5422 2346778888889999999999999988844
No 66
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=95.49 E-value=0.016 Score=53.14 Aligned_cols=44 Identities=20% Similarity=0.071 Sum_probs=36.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-ccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-LNTD 46 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY-ln~d 46 (466)
|+.|.++| .||-||-..+..|-..|+.+|++|..+|.||. .++|
T Consensus 4 ~~~i~i~G--~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~~~~diD 48 (169)
T 1xjc_A 4 MNVWQVVG--YKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPA 48 (169)
T ss_dssp CCEEEEEC--CTTSSHHHHHHHHHHHHHHTTCCEEEEECCC------
T ss_pred CEEEEEEC--CCCCCHHHHHHHHHHhhHhcCCeeeEEEeCCCCcccc
Confidence 56788888 78999999999999999999999999999997 5666
No 67
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=95.36 E-value=0.14 Score=48.50 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=37.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
+|.|+|+++ -.|.||=.+|+.|+..|..+|+||-++.+||.-
T Consensus 18 ~~vI~v~s~-kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSG-KGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEECS-SSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEEcC-CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 367888876 479999999999999999999999999999986
No 68
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=95.34 E-value=0.026 Score=52.79 Aligned_cols=45 Identities=18% Similarity=0.180 Sum_probs=37.9
Q ss_pred CCCEEEecCCCCCC-CchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 362 GADGILVPGGFGNR-GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 362 ~~DGIllPGGfG~r-g~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
++|.|+||||.|.. .....++.++.+.++++|+.+||-|-++|+-
T Consensus 63 ~~D~livpGG~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~ 108 (206)
T 3f5d_A 63 NFNLLVMIGGDSWSNDNKKLLHFVKTAFQKNIPIAAICGAVDFLAK 108 (206)
T ss_dssp CCSEEEECCBSCCCCCCHHHHHHHHHHHHTTCCEEEETHHHHHHHH
T ss_pred CCCEEEEcCCCChhhcCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 68999999998754 3345678889999999999999999998874
No 69
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=95.09 E-value=0.013 Score=55.48 Aligned_cols=47 Identities=21% Similarity=0.279 Sum_probs=39.4
Q ss_pred cCCCEEEecCCCCCC--------------CchhHHHHHHHHHHcCCcEEEehHHHHHHHHH
Q 012331 361 KGADGILVPGGFGNR--------------GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (466)
Q Consensus 361 ~~~DGIllPGGfG~r--------------g~eG~i~aIk~are~~iPvLGICLGmQllaia 407 (466)
.++|+|+||||+|.. ......+.++.+.++++|+.+||-|-++|+-+
T Consensus 89 ~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a 149 (232)
T 1vhq_A 89 AELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI 149 (232)
T ss_dssp GGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH
T ss_pred ccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH
Confidence 468999999998751 13457788999999999999999999999866
No 70
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=95.08 E-value=0.023 Score=63.05 Aligned_cols=95 Identities=16% Similarity=0.065 Sum_probs=62.9
Q ss_pred eEEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCC--cccc---cccCCchhhHHHHHHc--cCCCEEEec
Q 012331 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD--LEDA---TEKENPDAYKAAWKLL--KGADGILVP 369 (466)
Q Consensus 298 v~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~--l~~~---~~~~~p~~y~~~~~~L--~~~DGIllP 369 (466)
.+|+|+= ..++.+ ...++.++|+.+|+.+.+ +..+. +... ....+- ..+.. ..+|+|+||
T Consensus 601 rKVaILl-aDGfEe~El~~pvdaLr~AG~~V~v------VS~~~g~V~gs~G~~V~aD~-----t~~~v~s~~fDALVVP 668 (753)
T 3ttv_A 601 RVVAILL-NDEVRSADLLAILKALKAKGVHAKL------LYSRMGEVTADDGTVLPIAA-----TFAGAPSLTVDAVIVP 668 (753)
T ss_dssp CEEEEEC-CTTCCHHHHHHHHHHHHHHTCEEEE------EESSSSEEECTTSCEEECCE-----ETTTSCGGGCSEEEEC
T ss_pred CEEEEEe-cCCCCHHHHHHHHHHHHHCCCEEEE------EEcCCCeEEeCCCCEEeccc-----chhhCCCcCCCEEEEC
Confidence 4888875 456665 456789999999998765 22211 1000 000000 00111 248999999
Q ss_pred CCCCCC---CchhHHHHHHHHHHcCCcEEEehHHHHHHH
Q 012331 370 GGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (466)
Q Consensus 370 GGfG~r---g~eG~i~aIk~are~~iPvLGICLGmQlla 405 (466)
|| |.. .....+..++.+.+.++|+-.||-|-++|+
T Consensus 669 GG-g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa 706 (753)
T 3ttv_A 669 CG-NIADIADNGDANYYLMEAYKHLKPIALAGDARKFKA 706 (753)
T ss_dssp CS-CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGG
T ss_pred CC-ChHHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHH
Confidence 99 653 335678899999999999999999999887
No 71
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=95.00 E-value=0.25 Score=51.45 Aligned_cols=40 Identities=28% Similarity=0.493 Sum_probs=36.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeecccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPYL 43 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~-g~~v~~~K~DpYl 43 (466)
+.|.++| .+|.||=.+++.|+..|+.+ |++|.++..|||-
T Consensus 101 ~vI~ivG--~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 101 AVVLMAG--LQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEEEC--STTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 5677885 49999999999999999999 9999999999985
No 72
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=94.94 E-value=0.037 Score=53.57 Aligned_cols=101 Identities=13% Similarity=0.100 Sum_probs=60.3
Q ss_pred eEEEEEeccCCchh-hHHHHHHHH-HHcCCceeEEeEEEEeeCCCcccc-cccCCchhhHHHHHHc-cCCCEEEecCCC-
Q 012331 298 VRIAMVGKYTGLSD-AYLSILKAL-LHASVDLRKKLVIDWIPACDLEDA-TEKENPDAYKAAWKLL-KGADGILVPGGF- 372 (466)
Q Consensus 298 v~IaIVgkY~g~~D-ay~SI~~aL-~~aG~~~~v~v~i~~i~s~~l~~~-~~~~~p~~y~~~~~~L-~~~DGIllPGGf- 372 (466)
.+|+++- |.++.+ ......+.| ...++++.+ ...+...+... ...-.+. ...+.+ ..+|.|+||||.
T Consensus 24 ~~I~ill-~~gf~~~e~~~p~dvl~~~~~~~v~~----vs~~~~~V~~~~G~~i~~d---~~l~~~~~~yD~liVPGG~~ 95 (253)
T 3ewn_A 24 EQIAMLV-YPGMTVMDLVGPHCMFGSLMGAKIYI----VAKSLDPVTSDAGLAIVPT---ATFGTCPRDLTVLFAPGGTD 95 (253)
T ss_dssp CEEEEEC-CTTBCHHHHHHHHHHHTTSTTCEEEE----EESSSSCEECTTSCEECCS---EETTTSCSSCSEEEECCBSH
T ss_pred eEEEEEe-CCCCcHHHHHHHHHHHHhCCCCEEEE----EeCCCCeEEcCCCCEEeCC---cCHHHcCCCCCEEEECCCcc
Confidence 5888886 767665 334567777 345555432 22222111100 0000000 001122 245999999998
Q ss_pred CCC---CchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 373 GNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 373 G~r---g~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
|.. ..+..++.++.+.++++++.+||-|-.+|+-
T Consensus 96 g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa~ 132 (253)
T 3ewn_A 96 GTLAAASDAETLAFMADRGARAKYITSVCSGSLILGA 132 (253)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHH
T ss_pred chhhhccCHHHHHHHHHHHHcCCEEEEEChHHHHHHH
Confidence 652 4456788899999999999999999988773
No 73
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=94.82 E-value=0.2 Score=48.26 Aligned_cols=40 Identities=25% Similarity=0.329 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
|.|.|+++ -.|.||=.+|+.|+..|..+|+||-++.+||+
T Consensus 5 kvI~v~s~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~ 44 (286)
T 2xj4_A 5 RVIVVGNE-KGGAGKSTIAVHLVTALLYGGAKVAVIDLDLR 44 (286)
T ss_dssp EEEEECCS-SSCTTHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred eEEEEEcC-CCCCCHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 57777764 57899999999999999999999999999994
No 74
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=94.78 E-value=0.015 Score=54.16 Aligned_cols=45 Identities=24% Similarity=0.355 Sum_probs=38.4
Q ss_pred cCCCEEEecCCCCC----CCchhHHHHHHHHHHcCCcEEEehHHHHHHH
Q 012331 361 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (466)
Q Consensus 361 ~~~DGIllPGGfG~----rg~eG~i~aIk~are~~iPvLGICLGmQlla 405 (466)
..+|+|+||||++. +......+.++.+.++++|+.+||-|-++|+
T Consensus 88 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La 136 (224)
T 1u9c_A 88 HGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLV 136 (224)
T ss_dssp SSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHH
Confidence 47899999999875 2345678899999999999999999999877
No 75
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=94.51 E-value=0.18 Score=55.63 Aligned_cols=95 Identities=12% Similarity=0.044 Sum_probs=63.0
Q ss_pred eEEEEEeccCC-chh-hHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCC-
Q 012331 298 VRIAMVGKYTG-LSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN- 374 (466)
Q Consensus 298 v~IaIVgkY~g-~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~- 374 (466)
.||||+-. .+ +.+ -...+..+|+.+|+.+.+ |.+.. .. .. +- .|.+ .....+|+|+||||...
T Consensus 538 rKVaILva-dG~fE~~El~~p~~aL~~aGa~V~v------Vsp~~-g~-Gv--D~-t~~~--~~s~~fDAVvlPGG~~~~ 603 (688)
T 3ej6_A 538 LRVGVLST-TKGGSLDKAKALKEQLEKDGLKVTV------IAEYL-AS-GV--DQ-TYSA--ADATAFDAVVVAEGAERV 603 (688)
T ss_dssp CEEEEECC-SSSSHHHHHHHHHHHHHHTTCEEEE------EESSC-CT-TC--CE-ETTT--CCGGGCSEEEECTTCCTT
T ss_pred CEEEEEcc-CCCccHHHHHHHHHHHHHCCCEEEE------EeCCC-CC-Cc--cc-Cccc--CChhcCcEEEECCCcccc
Confidence 48888742 35 443 456789999999999876 33211 00 00 00 0100 11236899999999632
Q ss_pred ----------CCchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 375 ----------RGVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 375 ----------rg~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
+.....+..++.+.+.++|+..||-|-|+|.-
T Consensus 604 ~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~~ 645 (688)
T 3ej6_A 604 FSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQS 645 (688)
T ss_dssp TSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHHH
T ss_pred cccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHHH
Confidence 22345788899999999999999999999983
No 76
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=94.45 E-value=0.41 Score=50.18 Aligned_cols=40 Identities=23% Similarity=0.377 Sum_probs=36.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
+.|+++|- +|.||=.+++.|+..|+.+|++|.++..|||-
T Consensus 101 ~vIlivG~--~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 101 TILLMVGI--QGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred eEEEEECc--CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 46777775 99999999999999999999999999999973
No 77
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=94.18 E-value=0.089 Score=48.60 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=37.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeeccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPY 42 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~-g~~v~~~K~DpY 42 (466)
+|.|.|+++ -.|.||=.+|+.++..|..+ |+||-++.+||.
T Consensus 4 ~~vI~v~s~-kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 4 KRVFGFVSA-KGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CEEEEEEES-STTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CeEEEEECC-CCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 578888876 58999999999999999999 999999999997
No 78
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=94.11 E-value=0.13 Score=47.18 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=35.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
|| |.|+ | -.|.||=.+|+.++..|..+|+||-++.+||-
T Consensus 1 mk-I~vs-~-kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MK-LAVA-G-KGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CE-EEEE-C-SSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CE-EEEe-c-CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 67 4555 4 89999999999999999999999999999994
No 79
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=94.10 E-value=0.58 Score=48.83 Aligned_cols=39 Identities=28% Similarity=0.456 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
+.|.++|. +|.||=.+++.|+.+|+.+|.+|.++-.|+|
T Consensus 98 ~vI~lvG~--~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~ 136 (433)
T 3kl4_A 98 FIIMLVGV--QGSGKTTTAGKLAYFYKKRGYKVGLVAADVY 136 (433)
T ss_dssp EEEEECCC--TTSCHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 56788875 8999999999999999999999999999976
No 80
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=93.62 E-value=0.39 Score=48.15 Aligned_cols=40 Identities=28% Similarity=0.486 Sum_probs=34.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
|++|++| -.|.||=.+|++++..|..+|.||-++-.||--
T Consensus 17 ~i~~~sg--kGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 17 RWIFVGG--KGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp CEEEEEC--STTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred EEEEEeC--CCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 5666555 789999999999999999999999999999743
No 81
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=93.61 E-value=0.024 Score=54.06 Aligned_cols=45 Identities=11% Similarity=0.056 Sum_probs=37.6
Q ss_pred cCCCEEEecCCCCC----CCchhHHHHHHHHHHcCCcEEEehHHHHHHH
Q 012331 361 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (466)
Q Consensus 361 ~~~DGIllPGGfG~----rg~eG~i~aIk~are~~iPvLGICLGmQlla 405 (466)
.++|+||||||.|. +..+...+.++.+.++++|+.+||-|-++|+
T Consensus 97 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La 145 (243)
T 1rw7_A 97 DDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFD 145 (243)
T ss_dssp GGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 36899999999884 2335678889999999999999999998766
No 82
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=93.32 E-value=0.035 Score=53.61 Aligned_cols=46 Identities=15% Similarity=0.058 Sum_probs=38.5
Q ss_pred cCCCEEEecCCCCC----CCchhHHHHHHHHHHcCCcEEEehHHHHHHHH
Q 012331 361 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (466)
Q Consensus 361 ~~~DGIllPGGfG~----rg~eG~i~aIk~are~~iPvLGICLGmQllai 406 (466)
.++|+|+||||+|. +..+...+.++++.++++|+.+||-|-++|+-
T Consensus 104 ~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La~ 153 (247)
T 3n7t_A 104 HDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLPG 153 (247)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGG
T ss_pred hhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHHH
Confidence 35899999999985 23356788899999999999999999988763
No 83
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=93.22 E-value=0.12 Score=57.42 Aligned_cols=102 Identities=16% Similarity=0.062 Sum_probs=63.8
Q ss_pred eEEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCCcccc---cccCCchhhHHHHHH--ccCCCEEEecCC
Q 012331 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDA---TEKENPDAYKAAWKL--LKGADGILVPGG 371 (466)
Q Consensus 298 v~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~---~~~~~p~~y~~~~~~--L~~~DGIllPGG 371 (466)
.+|+|+- +.++.+ ......++|..+|+++.+ .......+... .+..+. ..+. ...+|+|+||||
T Consensus 535 rkVaILl-~dGfe~~El~~p~dvL~~AG~~V~i----vS~~gg~V~ss~G~~v~~d~-----~l~~v~~~~yDaViVPGG 604 (715)
T 1sy7_A 535 RRVAIII-ADGYDNVAYDAAYAAISANQAIPLV----IGPRRSKVTAANGSTVQPHH-----HLEGFRSTMVDAIFIPGG 604 (715)
T ss_dssp CEEEEEC-CTTBCHHHHHHHHHHHHHTTCEEEE----EESCSSCEEBTTSCEECCSE-----ETTTCCGGGSSEEEECCC
T ss_pred CEEEEEE-cCCCCHHHHHHHHHHHHhcCCEEEE----EECCCCceecCCCceEeccc-----ccccCCcccCCEEEEcCC
Confidence 5899886 666554 345678999999977654 11111111000 000000 0012 235899999999
Q ss_pred CCC-C---CchhHHHHHHHHHHcCCcEEEehHHHHHHHHHhc
Q 012331 372 FGN-R---GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFA 409 (466)
Q Consensus 372 fG~-r---g~eG~i~aIk~are~~iPvLGICLGmQllaia~G 409 (466)
.+. . .....+..++.+.++++|+.+||-|-.+|+-++|
T Consensus 605 ~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~AlG 646 (715)
T 1sy7_A 605 AKAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKAIA 646 (715)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHHC
T ss_pred cccHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHccC
Confidence 532 1 2345778899999999999999999999986643
No 84
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=93.09 E-value=0.039 Score=53.11 Aligned_cols=47 Identities=13% Similarity=-0.005 Sum_probs=39.0
Q ss_pred cCCCEEEecCCCCC----CCchhHHHHHHHHHHcCCcEEEehHHHHHHHHH
Q 012331 361 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (466)
Q Consensus 361 ~~~DGIllPGGfG~----rg~eG~i~aIk~are~~iPvLGICLGmQllaia 407 (466)
.++|+|+||||.|. +..+...+.++.+.++++|+.+||-|-.+|+-+
T Consensus 97 ~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La~a 147 (244)
T 3kkl_A 97 SDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGL 147 (244)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTC
T ss_pred hhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHh
Confidence 46899999999875 234567888999999999999999999888643
No 85
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=92.85 E-value=0.15 Score=49.34 Aligned_cols=43 Identities=33% Similarity=0.451 Sum_probs=39.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~ 45 (466)
+|.|.|+ | -.|.||=.+|+.|+..|..+|+||-++.+||.-|.
T Consensus 41 ~~vI~v~-~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~~~~ 83 (307)
T 3end_A 41 AKVFAVY-G-KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDS 83 (307)
T ss_dssp CEEEEEE-C-STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCT
T ss_pred ceEEEEE-C-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCCCH
Confidence 5789999 7 99999999999999999999999999999996443
No 86
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=92.30 E-value=1.2 Score=45.32 Aligned_cols=152 Identities=17% Similarity=0.145 Sum_probs=95.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg~e~dlDlg~yerf~~~ 80 (466)
+|-|||||= =+++||=.++..|-+.|+.+|+++..+| |-|-|..- ...|-..|-
T Consensus 152 ~k~i~v~GT-D~~VGK~~ts~~L~~~l~~~G~~a~~~~-------------tgqtg~~~-~~~gi~~Da----------- 205 (349)
T 2obn_A 152 CRRVLTVGT-DMAIGKMSTSLELHWAAKLRGWRSKFLA-------------TGQTGVML-EGDGVALDA----------- 205 (349)
T ss_dssp SEEEEEEES-SSSSSHHHHHHHHHHHHHHTTCCEEEEC-------------CSHHHHHH-HSCSCCGGG-----------
T ss_pred ceEEEEcCC-CccccceeHHHHHHHHHHhcCCcEEEEe-------------ccchhhhh-hcCCcchhH-----------
Confidence 367899986 6779999999999999999999998854 22444211 111212221
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEe-eCccccccCcchH
Q 012331 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIE-LGGTIGDIESMPF 159 (466)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~E-igGtvGdiEs~pf 159 (466)
-.....+| ++.+.+.++ .+++|+++|| -||-.-=. +...
T Consensus 206 ---v~~df~aG----------------------------~ve~~~~~~--------~~~~d~vlVEGqGgl~~P~-~~~t 245 (349)
T 2obn_A 206 ---VRVDFAAG----------------------------AVEQMVMRY--------GKNYDILHIEGQGSLLHPG-STAT 245 (349)
T ss_dssp ---SBHHHHHH----------------------------HHHHHHHHH--------TTTCSEEEECCCCCTTSTT-CCTH
T ss_pred ---HHHHHHhh----------------------------hHHHHHHHh--------ccCCCEEEEeCCCcccCcC-hHhH
Confidence 00111122 333334443 2368999999 56655333 3333
Q ss_pred HHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCchhhhHHHhhc--------CCCcccEEEEecCCCC
Q 012331 160 IEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRG--------QGLTPNILACRSTVAL 222 (466)
Q Consensus 160 ~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~LrS--------~GI~pd~lV~Rs~~~l 222 (466)
+.=+ +...+.-++.+|-.=...+..--++.--|-+|.+...++ .++++-++++.....-
T Consensus 246 ~~ll----~g~~p~~vILv~~~~~g~i~~~~~~~~p~l~~~i~t~e~l~~~~~~~~~~~V~Gi~lN~~~~~ 312 (349)
T 2obn_A 246 LPLI----RGSQPTQLVLVHRAGQTHNGNNPHVPIPPLPEVIRLYETVASGGGAFGTVPVVGIALNTAHLD 312 (349)
T ss_dssp HHHH----HHHCCSEEEEEEETTCCBCSSCTTSBCCCHHHHHHHHHHHHHTTTTSCCCCEEEEEEECTTSC
T ss_pred HHHH----HHcCCCeEEEEECCCCceECCCCccCCCCHHHHHHHHHHHHHhhccCCCCcEEEEEEECCCCC
Confidence 3333 444456699999877777765556666677877766654 6899999999876543
No 87
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=92.25 E-value=0.37 Score=49.02 Aligned_cols=148 Identities=14% Similarity=0.060 Sum_probs=88.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg~e~dlDlg~yerf~~~ 80 (466)
+|-|||||==. ++||+.++..+-+.|+.+|++|..++.-.+-..- ... .|-+ +|
T Consensus 169 ~~ri~v~GTDt-~vGKt~t~~~L~~~l~~~G~~v~~v~tgqtg~li-----~~~--------~gv~--~D---------- 222 (350)
T 2g0t_A 169 IKVVGVFGTDC-VVGKRTTAVQLWERALEKGIKAGFLATGQTGILI-----GAD--------AGYV--ID---------- 222 (350)
T ss_dssp SEEEEEEESSS-SSSHHHHHHHHHHHHHHTTCCEEEEECSHHHHHT-----TCS--------EECC--GG----------
T ss_pred ceEEEEecCCC-CccCccHHHHHHHHHHhcCCeEEEEccCceeeee-----ccC--------CCCC--CC----------
Confidence 36799999777 5999999999999999999999998876652211 111 0111 11
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 012331 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (466)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs~pf~ 160 (466)
--+.||+..++...+.+.. .+++|+++||--|-+- .|..
T Consensus 223 ------------------------------~~~~~~~ag~~e~~i~~~~-------~~~~D~ivVEGqGgl~----~P~~ 261 (350)
T 2g0t_A 223 ------------------------------AVPADFVSGVVEKAVLKLE-------KTGKEIVFVEGQGALR----HPAY 261 (350)
T ss_dssp ------------------------------GSBGGGHHHHHHHHHHHHH-------HTTCSEEEEECCSCTT----CTTT
T ss_pred ------------------------------ceecchhhHHHHhhHHHhh-------hcCCCEEEEccCeecc----ccCc
Confidence 0113444445544455442 2478999999766554 3432
Q ss_pred HH-HHHhhhhcCCCCEEEEEeeeeeeecCCCcccc-CchhhhHHHhhcCC-CcccEEE
Q 012331 161 EA-LGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKT-KPTQHSVRGLRGQG-LTPNILA 215 (466)
Q Consensus 161 ea-~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~Kt-KptQhsvk~LrS~G-I~pd~lV 215 (466)
-. ---+.+-.-++-+++.|-.-=+++..--+..- -|-++.++..+++. +.+-+++
T Consensus 262 ~~v~~~ll~g~~p~~vIl~h~~~r~~~~~~~~~~~~~~i~~~i~~ie~l~~~~V~gi~ 319 (350)
T 2g0t_A 262 GQVTLGLLYGSNPDVVFLVHDPSRDHFESFPEIPKKPDFEEERRLIETLSNAKVIGGV 319 (350)
T ss_dssp HHHHHHHHHHHCCSEEEEECCTTCSSCTTCTTSSCCCCHHHHHHHHHHSSSCEEEEEE
T ss_pred hHHHHHHHcCCCCCEEEEEeCCCCccccCCCcccCCcCHHHHHHHHHHhcCCcEEEEE
Confidence 11 11222333445577878554444543334333 46677787777655 5555555
No 88
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=91.82 E-value=0.41 Score=52.81 Aligned_cols=95 Identities=14% Similarity=0.082 Sum_probs=62.1
Q ss_pred eEEEEEecc-CCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCC-C-
Q 012331 298 VRIAMVGKY-TGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF-G- 373 (466)
Q Consensus 298 v~IaIVgkY-~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGf-G- 373 (466)
.||+|+-.- .++.+ -...+..+|+.+|+.+.+ +... .... .|- .|.+ .....+|+|+||||. |
T Consensus 530 ~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~v------Vs~~-~g~~---vD~-t~~~--~~s~~fDAVvlPGG~~g~ 596 (688)
T 2iuf_A 530 LKVGLLASVNKPASIAQGAKLQVALSSVGVDVVV------VAER-XANN---VDE-TYSA--SDAVQFDAVVVADGAEGL 596 (688)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEE------EESS-CCTT---CCE-ESTT--CCGGGCSEEEECTTCGGG
T ss_pred CEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEE------Eecc-CCcc---ccc-chhc--CCccccCeEEecCCCccc
Confidence 488887520 34444 456789999999999876 2221 1100 000 1110 112468999999994 4
Q ss_pred ---------------CC---CchhHHHHHHHHHHcCCcEEEehHHHHHHH
Q 012331 374 ---------------NR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (466)
Q Consensus 374 ---------------~r---g~eG~i~aIk~are~~iPvLGICLGmQlla 405 (466)
.. .....++.++.+.+.++|+-.||-|-++|.
T Consensus 597 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~ 646 (688)
T 2iuf_A 597 FGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALE 646 (688)
T ss_dssp CCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHH
T ss_pred ccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHH
Confidence 21 224578888999999999999999999876
No 89
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=91.78 E-value=0.053 Score=53.40 Aligned_cols=48 Identities=25% Similarity=0.344 Sum_probs=38.9
Q ss_pred ccCCCEEEecCCCCCC-C---chhHHHHHHHHHHcCCcEEEehHHHHHHHHH
Q 012331 360 LKGADGILVPGGFGNR-G---VQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (466)
Q Consensus 360 L~~~DGIllPGGfG~r-g---~eG~i~aIk~are~~iPvLGICLGmQllaia 407 (466)
..++|+||||||.|.. . .....+.++++.++++|+.+||-|-.+|+-+
T Consensus 143 ~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La~a 194 (291)
T 1n57_A 143 DSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLAL 194 (291)
T ss_dssp TCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGG
T ss_pred cccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHHhh
Confidence 3578999999998764 2 2457888999999999999999999866533
No 90
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=91.36 E-value=1.7 Score=45.04 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
+.|.++| .+|.||=.+++.|+.+|+.+|.+|.++..|+|-
T Consensus 99 ~vi~i~G--~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r 138 (425)
T 2ffh_A 99 NLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (425)
T ss_dssp EEEEEEC--CTTSSHHHHHHHHHHHHHTTTCCEEEEECCSSC
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEeeccccC
Confidence 4677775 399999999999999999999999999999873
No 91
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=91.32 E-value=0.28 Score=45.64 Aligned_cols=40 Identities=25% Similarity=0.420 Sum_probs=36.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
+|.|.|+++ -.|.||=.+|+.++..|..+|+||-++.+||
T Consensus 2 ~~vi~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSG-KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 478888885 5899999999999999999999999999999
No 92
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=91.31 E-value=0.11 Score=49.82 Aligned_cols=101 Identities=16% Similarity=0.098 Sum_probs=54.1
Q ss_pred CeEEEEEeccCCchh-hHHHHHHHHHHcCCceeEEeEEEEeeCCCcccc-cccCCchhhHHHHHHccCCCEEEecCC-CC
Q 012331 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDA-TEKENPDAYKAAWKLLKGADGILVPGG-FG 373 (466)
Q Consensus 297 ~v~IaIVgkY~g~~D-ay~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~-~~~~~p~~y~~~~~~L~~~DGIllPGG-fG 373 (466)
..+|+++- |.++.+ ......+.|+.++....+ .+.. +...+... ...-.|. ...+...++|.|+|||| +|
T Consensus 20 ~~kV~ill-~dGf~~~e~~~p~dvl~~~~~~~~v--~~vs-~~~~V~ss~G~~v~~d---~~l~~~~~~D~liVPGG~~g 92 (236)
T 3bhn_A 20 MYKVGIVL-FDDFTDVDFFLMNDLLGRTSDSWTV--RILG-TKPEHHSQLGMTVKTD---GHVSEVKEQDVVLITSGYRG 92 (236)
T ss_dssp CEEEEEEC-CTTBCHHHHHHHHHHHTTCSSSEEE--EEEE-SSSEEEBTTCCEEECS---EEGGGGGGCSEEEECCCTTH
T ss_pred CCEEEEEe-CCCChHHHHHHHHHHHHcCCCCEEE--EEEE-CCCcEEecCCcEEecC---cccccccCCCEEEEcCCccC
Confidence 45788886 767665 334567788775521221 2222 11111100 0000000 00123567899999999 66
Q ss_pred CC---CchhHHHHHHHHHHcCC-cEEEehHHHHHHHH
Q 012331 374 NR---GVQGKILAAKYAREHRI-PYLGICLGMQVAVI 406 (466)
Q Consensus 374 ~r---g~eG~i~aIk~are~~i-PvLGICLGmQllai 406 (466)
.+ ..+..++.+ ..+++. |+.+||-|-.+|+-
T Consensus 93 ~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~lLa~ 127 (236)
T 3bhn_A 93 IPAALQDENFMSAL--KLDPSRQLIGSICAGSFVLHE 127 (236)
T ss_dssp HHHHHTCHHHHHHC--CCCTTTCEEEEETTHHHHHHH
T ss_pred HhhhccCHHHHHHH--HhCCCCCEEEEEcHHHHHHHH
Confidence 53 223455555 333455 99999999998874
No 93
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=91.18 E-value=0.3 Score=44.86 Aligned_cols=41 Identities=22% Similarity=0.327 Sum_probs=37.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
+|.|.|+++ -.|.||=.+|+.++..|..+|+||-++.+||.
T Consensus 2 ~~~i~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (237)
T 1g3q_A 2 GRIISIVSG-KGGTGKTTVTANLSVALGDRGRKVLAVDGDLT 42 (237)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred ceEEEEecC-CCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 478888885 57999999999999999999999999999994
No 94
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=90.91 E-value=1.7 Score=43.60 Aligned_cols=44 Identities=20% Similarity=0.302 Sum_probs=39.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~ 45 (466)
+|.|.|++| -.|.||=.+|+.++..|..+|+||-++-+||+-|+
T Consensus 143 ~kvIav~s~-KGGvGKTT~a~nLA~~La~~g~rVlliD~D~~~~l 186 (373)
T 3fkq_A 143 SSVVIFTSP-CGGVGTSTVAAACAIAHANMGKKVFYLNIEQCGTT 186 (373)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHHTCCEEEEECCTTCCH
T ss_pred ceEEEEECC-CCCChHHHHHHHHHHHHHhCCCCEEEEECCCCCCH
Confidence 478888887 68999999999999999999999999999977554
No 95
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=90.76 E-value=0.29 Score=52.16 Aligned_cols=42 Identities=29% Similarity=0.385 Sum_probs=34.0
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 012331 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (466)
Q Consensus 3 ~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~ 45 (466)
-|++++| -.|.||-.+|++++..|..+|.+|-++-.||.-|.
T Consensus 328 ~~~~~~~-~~g~Gktt~a~~lA~~l~~~g~~vllvD~Dp~~~l 369 (589)
T 1ihu_A 328 GLIMLMG-KGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAHL 369 (589)
T ss_dssp EEEEEEC-STTSSHHHHHHHHHHHHHHTTCCEEEEESCCC---
T ss_pred eEEEEec-CCCCChhhHHHHHHHHHHHCCCcEEEEeCCCcccH
Confidence 3455544 57899999999999999999999999999997554
No 96
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=90.56 E-value=0.26 Score=45.27 Aligned_cols=100 Identities=18% Similarity=0.130 Sum_probs=54.5
Q ss_pred eEEEEEeccCCchhhH-HHHHHHHHHcCCceeEEeEEE-----EeeCC-Ccccc---cccCCchhhHHHHHHccCCCEEE
Q 012331 298 VRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVID-----WIPAC-DLEDA---TEKENPDAYKAAWKLLKGADGIL 367 (466)
Q Consensus 298 v~IaIVgkY~g~~Day-~SI~~aL~~aG~~~~v~v~i~-----~i~s~-~l~~~---~~~~~p~~y~~~~~~L~~~DGIl 367 (466)
.||+++= +.++++.= ....+.|+++|+++.+. .+. .+.+. .+... ...+.+ .......++|.|+
T Consensus 5 ~kV~ill-~dGfe~~E~~~p~~vl~~ag~~v~~~-s~~~~~~~~v~~~~g~~v~~d~~~~~~~----~~d~~~~~yD~lv 78 (194)
T 4gdh_A 5 VKVCLFV-ADGTDEIEFSAPWGIFKRAEIPIDSV-YVGENKDRLVKMSRDVEMYANRSYKEIP----SADDFAKQYDIAI 78 (194)
T ss_dssp CCEEEEE-ETTCCHHHHHHHHHHHHHTTCCEEEE-EESSCTTCEEECTTSCEEECSEEGGGSC----CHHHHHHHCSEEE
T ss_pred CEEEEEE-CCCcCHHHHHHHHHHHHHCCCeEEEE-EEcCCCCceEecCCCceeeccccHhhCC----ccccccccCCEEE
Confidence 3677765 66766532 34578899999877542 100 01111 01000 000000 0111234689999
Q ss_pred ecCCCCC-C---CchhHHHHHHHHHH-cCCcEEEehHHHHH
Q 012331 368 VPGGFGN-R---GVQGKILAAKYARE-HRIPYLGICLGMQV 403 (466)
Q Consensus 368 lPGGfG~-r---g~eG~i~aIk~are-~~iPvLGICLGmQl 403 (466)
||||.+. . ..+...+.++.+.+ .++|+-.||-|..+
T Consensus 79 vPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~~l 119 (194)
T 4gdh_A 79 IPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLT 119 (194)
T ss_dssp ECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGGHH
T ss_pred ECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccccc
Confidence 9999642 2 33456677777654 47899999999743
No 97
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=90.07 E-value=0.39 Score=43.66 Aligned_cols=44 Identities=25% Similarity=0.250 Sum_probs=35.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-ccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-LNTD 46 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY-ln~d 46 (466)
++.|.++| .||-||-.....|-..|+.+|++|..+|.||- .++|
T Consensus 6 ~~~i~i~G--~sGsGKTTl~~~l~~~l~~~g~~v~~i~~~~~~~~id 50 (174)
T 1np6_A 6 IPLLAFAA--WSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVD 50 (174)
T ss_dssp CCEEEEEC--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-----
T ss_pred ceEEEEEe--CCCCCHHHHHHHHHHhccccCCceeEEeeCCCccccC
Confidence 36788888 79999999999999999999999999999983 3555
No 98
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=89.08 E-value=0.45 Score=44.84 Aligned_cols=42 Identities=24% Similarity=0.305 Sum_probs=37.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln 44 (466)
+|.|.|+++ -.|.||=.+|+.++..|. +|+||-++.+||.-|
T Consensus 27 ~~vI~v~s~-kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~~ 68 (267)
T 3k9g_A 27 PKIITIASI-KGGVGKSTSAIILATLLS-KNNKVLLIDMDTQAS 68 (267)
T ss_dssp CEEEEECCS-SSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTCH
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHH-CCCCEEEEECCCCCC
Confidence 467777766 589999999999999999 999999999999754
No 99
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=88.92 E-value=0.57 Score=46.48 Aligned_cols=44 Identities=32% Similarity=0.440 Sum_probs=39.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTD 46 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d 46 (466)
+|.|-|+| ==|+||=.||+.|+..|..+|+||-++=+||+.|.-
T Consensus 48 aKVIAIaG--KGGVGKTTtavNLA~aLA~~GkkVllID~Dpq~~s~ 91 (314)
T 3fwy_A 48 AKVFAVYG--KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDST 91 (314)
T ss_dssp CEEEEEEC--STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCTT
T ss_pred ceEEEEEC--CCccCHHHHHHHHHHHHHHCCCeEEEEecCCCCccc
Confidence 48899995 668999999999999999999999999999988754
No 100
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=88.26 E-value=0.63 Score=44.51 Aligned_cols=42 Identities=26% Similarity=0.449 Sum_probs=38.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln 44 (466)
||.|.|+ | =-|.||=.+|+.|+..|..+|+||-++-+||.-|
T Consensus 2 MkvIavs-~-KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q~~ 43 (289)
T 2afh_E 2 MRQCAIY-G-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKAD 43 (289)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSSC
T ss_pred ceEEEEe-C-CCcCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 7888886 5 8899999999999999999999999999999754
No 101
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=87.97 E-value=0.61 Score=43.75 Aligned_cols=42 Identities=29% Similarity=0.470 Sum_probs=38.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln 44 (466)
||-|.|+ | =-|.||=.+|+.|+..|..+|+||-++-+||.-|
T Consensus 1 M~vI~vs-~-KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q~~ 42 (269)
T 1cp2_A 1 MRQVAIY-G-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKAD 42 (269)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTSC
T ss_pred CcEEEEe-c-CCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCCCC
Confidence 7888885 5 8899999999999999999999999999999654
No 102
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=87.08 E-value=0.52 Score=46.51 Aligned_cols=41 Identities=22% Similarity=0.426 Sum_probs=36.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
||-|+||+| -.|.||=.+|++++..|..+|.||-++-.||-
T Consensus 13 m~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 13 KTTFVFIGG-KGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp BCEEEEEEE-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 466777777 78999999999999999999999999999984
No 103
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=86.38 E-value=0.71 Score=43.39 Aligned_cols=43 Identities=28% Similarity=0.444 Sum_probs=37.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln 44 (466)
+|.|.|+++ -.|.||=.+|+.|+..|..+|+||-++.+||.-|
T Consensus 6 ~~vI~v~s~-kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~~~ 48 (257)
T 1wcv_1 6 VRRIALANQ-KGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGN 48 (257)
T ss_dssp CCEEEECCS-SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CEEEEEEeC-CCCchHHHHHHHHHHHHHHCCCCEEEEECCCCcC
Confidence 467888764 5789999999999999999999999999999644
No 104
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=86.13 E-value=0.89 Score=41.30 Aligned_cols=40 Identities=30% Similarity=0.355 Sum_probs=34.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
+|-|+||++ -.|.||=.+|+.|+..|..+|+||-+ +||-.
T Consensus 1 ~k~I~v~s~-kgGvGKTt~a~nLa~~la~~G~rVll--~dp~~ 40 (224)
T 1byi_A 1 SKRYFVTGT-DTEVGKTVASCALLQAAKAAGYRTAG--YKPVA 40 (224)
T ss_dssp CEEEEEEES-STTSCHHHHHHHHHHHHHHTTCCEEE--ECSEE
T ss_pred CceEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEE--Eccee
Confidence 478899875 57899999999999999999999998 56744
No 105
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=84.37 E-value=1 Score=45.07 Aligned_cols=41 Identities=32% Similarity=0.536 Sum_probs=36.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
+|-|+|++| -.|.||=.+|++++..|..+|+||-++-.||-
T Consensus 25 ~~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGG-KGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEEC-SSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 456777776 68999999999999999999999999999984
No 106
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=84.08 E-value=1.1 Score=45.01 Aligned_cols=46 Identities=22% Similarity=0.356 Sum_probs=41.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDA 47 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~ 47 (466)
||.|.|+++ --|.||=.+|+.+|..|..+|+||-++-+||.-|.-.
T Consensus 1 MkvIav~s~-KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q~~~~~ 46 (361)
T 3pg5_A 1 MRTISFFNN-KGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQCNATQ 46 (361)
T ss_dssp CEEEEBCCS-SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCTTHH
T ss_pred CeEEEEEcC-CCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCCCChhh
Confidence 788888877 6899999999999999999999999999999866543
No 107
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=83.95 E-value=7 Score=38.03 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
+.|.++| .+|.||=.+++.|+.+++..|.+|.++-.|++-
T Consensus 99 ~~i~i~g--~~G~GKTT~~~~la~~~~~~~~~v~l~~~d~~~ 138 (295)
T 1ls1_A 99 NLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (295)
T ss_dssp EEEEEEC--CTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEecCCccc
Confidence 5677885 499999999999999999999999999999874
No 108
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=82.18 E-value=1 Score=39.43 Aligned_cols=36 Identities=31% Similarity=0.458 Sum_probs=32.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|++|+++|. +|-||...+..|...|...|+++..+-
T Consensus 1 M~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~~~~~ 36 (194)
T 1nks_A 1 MKIGIVTGI--PGVGKSTVLAKVKEILDNQGINNKIIN 36 (194)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHHHhcCceEEEEE
Confidence 789999995 899999999999999999999887763
No 109
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=81.94 E-value=1.3 Score=42.39 Aligned_cols=42 Identities=19% Similarity=0.266 Sum_probs=35.7
Q ss_pred EEEEeCC-ccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 012331 3 YVLVTGG-VVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (466)
Q Consensus 3 ~i~vtgg-v~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln 44 (466)
-|.|++. .-.|.||=.+|+.|+..|..+|+||-++.+||.-|
T Consensus 36 ~i~v~~~s~KGGvGKTT~a~nLA~~la~~G~rVlliD~D~q~~ 78 (298)
T 2oze_A 36 AIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQAT 78 (298)
T ss_dssp CEEEEECCSSSSSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH
T ss_pred EEEEEeccCCCCchHHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 3555543 56789999999999999999999999999999865
No 110
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=80.18 E-value=0.97 Score=44.52 Aligned_cols=72 Identities=26% Similarity=0.244 Sum_probs=49.4
Q ss_pred CeEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCC
Q 012331 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (466)
Q Consensus 297 ~v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg 376 (466)
.++|+++.+... + ...+.+.|+..|+++.+ +.+.- ..+.++|.|++-||=|.
T Consensus 29 ~mki~iv~~~~~--~-~~~l~~~L~~~g~~v~~-------~~~~~----------------~~~~~~DlvIvlGGDGT-- 80 (278)
T 1z0s_A 29 GMRAAVVYKTDG--H-VKRIEEALKRLEVEVEL-------FNQPS----------------EELENFDFIVSVGGDGT-- 80 (278)
T ss_dssp -CEEEEEESSST--T-HHHHHHHHHHTTCEEEE-------ESSCC----------------GGGGGSSEEEEEECHHH--
T ss_pred ceEEEEEeCCcH--H-HHHHHHHHHHCCCEEEE-------ccccc----------------cccCCCCEEEEECCCHH--
Confidence 578999987533 2 56788899999988754 22110 23467899999997431
Q ss_pred chhHHHHHHHHHHcCCcEEEehHH
Q 012331 377 VQGKILAAKYAREHRIPYLGICLG 400 (466)
Q Consensus 377 ~eG~i~aIk~are~~iPvLGICLG 400 (466)
.+.+++++... +|++||=+|
T Consensus 81 ---~L~aa~~~~~~-~PilGIN~G 100 (278)
T 1z0s_A 81 ---ILRILQKLKRC-PPIFGINTG 100 (278)
T ss_dssp ---HHHHHTTCSSC-CCEEEEECS
T ss_pred ---HHHHHHHhCCC-CcEEEECCC
Confidence 44666666555 999999887
No 111
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=80.08 E-value=1.9 Score=42.03 Aligned_cols=155 Identities=18% Similarity=0.270 Sum_probs=91.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-------ccCCCCCCCccccceEEEccCCccccCCCCc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-------LNTDAGTMSPFEHGEVFVLDDGGEVDLDLGN 73 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY-------ln~d~gtmsp~~hgEvfv~~dg~e~dlDlg~ 73 (466)
+|.|+|||. -.|.||=.+|+.|+..|...|.||-++..||. +++++ +.| -+|+
T Consensus 104 ~kvI~vts~-kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r~~~l~~~~~~~~------~~g---------l~~~---- 163 (299)
T 3cio_A 104 NNILMITGA-TPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSN------EHG---------LSEY---- 163 (299)
T ss_dssp CCEEEEEES-SSSSCHHHHHHHHHHHHHHTTCCEEEEECCTTTCCHHHHTTCCC------SSS---------HHHH----
T ss_pred CeEEEEECC-CCCCChHHHHHHHHHHHHhCCCcEEEEECCCCCccHHHHcCCCC------CCC---------HHHH----
Confidence 367888864 47999999999999999999999999999983 33322 111 0110
Q ss_pred cccccCCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEccc-----------chHHHHHHHHHHhcccCCCCCCCCcE
Q 012331 74 YERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPH-----------ITDEIQDWIERVAMIPVDGKEGPVDV 142 (466)
Q Consensus 74 yerf~~~~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviPH-----------it~ei~~~i~~~~~~pvd~~~~~~d~ 142 (466)
|. .. .-..++|.+-.. ..+.|+|- -.+.+++.+..+. ..+|+
T Consensus 164 ----L~----~~------~~l~~~i~~~~~-----~~l~vl~~g~~~~~~~ell~~~~l~~ll~~l~--------~~yD~ 216 (299)
T 3cio_A 164 ----LA----GK------DELNKVIQHFGK-----GGFDVITRGQVPPNPSELLMRDRMRQLLEWAN--------DHYDL 216 (299)
T ss_dssp ----HT----TS------SCHHHHCEEETT-----TTEEEECCCSCCSCHHHHHTSHHHHHHHHHHH--------HHCSE
T ss_pred ----Cc----CC------CCHHHhhhccCC-----CCEEEEECCCCCCCHHHHhCHHHHHHHHHHHH--------hCCCE
Confidence 00 00 012233332110 23445542 1244566666654 36899
Q ss_pred EEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCchhhhHHHhhcCCCcccEEEEecC
Q 012331 143 CVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRST 219 (466)
Q Consensus 143 ~i~EigGtvGdiEs~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~ 219 (466)
|||+..+..+-- +|. .+.... + ..+++.- .+....+-++.+++.|+..|+..-++|+-..
T Consensus 217 VIIDtpp~~~~~------d~~-~l~~~a--d------~vilV~~--~~~~~~~~~~~~~~~l~~~~~~~~GvVlN~~ 276 (299)
T 3cio_A 217 VIVDTPPMLAVS------DAA-VVGRSV--G------TSLLVAR--FGLNTAKEVSLSMQRLEQAGVNIKGAILNGV 276 (299)
T ss_dssp EEEECCCTTTCT------HHH-HHGGGC--S------EEEEEEE--TTTSCTTHHHHHHHHHHHTTCCCCCEEEEEC
T ss_pred EEEcCCCCchhH------HHH-HHHHHC--C------EEEEEEc--CCCChHHHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 999999876421 111 111111 1 1222222 3455566788899999999998888887544
No 112
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=79.56 E-value=1.9 Score=45.92 Aligned_cols=39 Identities=31% Similarity=0.529 Sum_probs=35.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
|++|++|- .|.||=.+|++++..|..+|.||-++-.||-
T Consensus 9 ~i~~~sgk--GGvGKTT~a~~lA~~lA~~G~rVLlvd~D~~ 47 (589)
T 1ihu_A 9 PYLFFTGK--GGVGKTSISCATAIRLAEQGKRVLLVSTDPA 47 (589)
T ss_dssp SEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEEEeCC--CcCHHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 67777764 9999999999999999999999999999983
No 113
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=79.40 E-value=1.8 Score=43.63 Aligned_cols=40 Identities=35% Similarity=0.531 Sum_probs=36.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH--HCCCeeEEeeeccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK--ACGLRVTCIKIDPY 42 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~--~~g~~v~~~K~DpY 42 (466)
+|++|++| -.|.||=.+|++++..|. .+|.||-++-.||-
T Consensus 18 ~~i~~~~g--kGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 18 LKWIFVGG--KGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp CSEEEEEC--STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 36788877 789999999999999999 99999999999985
No 114
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=79.07 E-value=2.5 Score=40.65 Aligned_cols=156 Identities=13% Similarity=0.145 Sum_probs=90.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc-------cCCCCCCCccccceEEEccCCccccCCCCc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL-------NTDAGTMSPFEHGEVFVLDDGGEVDLDLGN 73 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl-------n~d~gtmsp~~hgEvfv~~dg~e~dlDlg~ 73 (466)
+|.|+||+. -.|.||=.+|+.|+..|..+|.||-++-.||.- ++++ +.| -+|+
T Consensus 82 ~kvI~vts~-kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~~~~l~~~~~~~~------~~g---------l~~~---- 141 (271)
T 3bfv_A 82 VQSIVITSE-APGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPN------NEG---------LSSL---- 141 (271)
T ss_dssp CCEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSSSCCHHHHTTCCC------SSS---------HHHH----
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCCCccHHHHcCCCC------CCC---------HHHH----
Confidence 467888875 568999999999999999999999999999642 1111 011 0110
Q ss_pred cccccCCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccc-----------hHHHHHHHHHHhcccCCCCCCCCcE
Q 012331 74 YERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHI-----------TDEIQDWIERVAMIPVDGKEGPVDV 142 (466)
Q Consensus 74 yerf~~~~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviPHi-----------t~ei~~~i~~~~~~pvd~~~~~~d~ 142 (466)
|. .. .-+.++|.+-. ...+.++|-- .+.+++.+..+. ..+|+
T Consensus 142 ----L~----~~------~~l~~~i~~~~-----~~~l~vl~~g~~~~~~~ell~~~~l~~ll~~l~--------~~yD~ 194 (271)
T 3bfv_A 142 ----LL----NW------STYQDSIISTE-----IEDLDVLTSGPIPPNPSELITSRAFANLYDTLL--------MNYNF 194 (271)
T ss_dssp ----HT----TS------SCHHHHEEECS-----STTEEEECCCSCCSCHHHHHTSHHHHHHHHHHH--------HHCSE
T ss_pred ----hC----CC------CCHHHcEEeCC-----CCCEEEEECCCCCCCHHHHhChHHHHHHHHHHH--------hCCCE
Confidence 00 00 01233443221 1235555431 234566666654 36899
Q ss_pred EEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCchhhhHHHhhcCCCcccEEEEecCC
Q 012331 143 CVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTV 220 (466)
Q Consensus 143 ~i~EigGtvGdiEs~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~~ 220 (466)
|||...+...-.. ..++.+. . + ..++|.- .+....+-++.+++.|+..|+..-++|+-...
T Consensus 195 VIIDtpp~~~~~d----~~~l~~~---a--D------~vilVv~--~~~~~~~~~~~~~~~l~~~~~~~~GvVlN~~~ 255 (271)
T 3bfv_A 195 VIIDTPPVNTVTD----AQLFSKF---T--G------NVVYVVN--SENNNKDEVKKGKELIEATGAKLLGVVLNRMP 255 (271)
T ss_dssp EEEECCCTTTCSH----HHHHHHH---H--C------EEEEEEE--TTSCCHHHHHHHHHHHHTTTCEEEEEEEEEEC
T ss_pred EEEeCCCCchHHH----HHHHHHH---C--C------EEEEEEe--CCCCcHHHHHHHHHHHHhCCCCEEEEEEeCCc
Confidence 9999988654311 1122111 1 1 1233322 34444556788889999999988888876543
No 115
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=78.79 E-value=1.6 Score=43.08 Aligned_cols=41 Identities=27% Similarity=0.386 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
|-|+||+| --|.||=.+|+.++..|..+|+||-++-.||.-
T Consensus 19 ~~i~v~sg-kGGvGKTTva~~LA~~lA~~G~rVllvD~D~~~ 59 (329)
T 2woo_A 19 LKWIFVGG-KGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAH 59 (329)
T ss_dssp CCEEEEEC-SSSSSHHHHHHHHHHHHHTSSSCEEEEECCTTC
T ss_pred CEEEEEeC-CCCCcHHHHHHHHHHHHHHCCCeEEEEECCCCc
Confidence 34566666 689999999999999999999999999999953
No 116
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=78.07 E-value=1.4 Score=44.18 Aligned_cols=42 Identities=26% Similarity=0.401 Sum_probs=36.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH--HCCCeeEEeeeccccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLK--ACGLRVTCIKIDPYLN 44 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~--~~g~~v~~~K~DpYln 44 (466)
|-|.||+| --|.||=.+|++++..|. .+|.||-++..||--|
T Consensus 18 ~~i~v~sg-KGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~~~ 61 (354)
T 2woj_A 18 HKWIFVGG-KGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPAHN 61 (354)
T ss_dssp CCEEEEEE-STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSCC
T ss_pred cEEEEEeC-CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCCC
Confidence 34566666 789999999999999999 9999999999998533
No 117
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=77.03 E-value=2.5 Score=38.67 Aligned_cols=40 Identities=28% Similarity=0.290 Sum_probs=34.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
|.|.|+++ =.|.||=.+|+.|+..|..+| +|.++.+||.-
T Consensus 1 kvI~v~s~-KGGvGKTT~a~~LA~~la~~g-~VlliD~D~q~ 40 (209)
T 3cwq_A 1 MIITVASF-KGGVGKTTTAVHLSAYLALQG-ETLLIDGDPNR 40 (209)
T ss_dssp CEEEEEES-STTSSHHHHHHHHHHHHHTTS-CEEEEEECTTC
T ss_pred CEEEEEcC-CCCCcHHHHHHHHHHHHHhcC-CEEEEECCCCC
Confidence 34556543 578999999999999999999 99999999964
No 118
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=75.65 E-value=2.9 Score=39.63 Aligned_cols=34 Identities=41% Similarity=0.654 Sum_probs=28.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|| |+||||- |-+.+.|-+.|.++|++|+.+--+|
T Consensus 1 Mk-ILVTGat------GfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MR-VLVGGGT------GFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CE-EEEECCC------CHHHHHHHHHHHHCCCEEEEEECCC
Confidence 78 8999964 7888899999999999999985543
No 119
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=75.46 E-value=3.5 Score=36.19 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=28.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
++|++||+ +|-||...+.-|...|+..|+.|..
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~v~~ 33 (197)
T 2z0h_A 1 MFITFEGI--DGSGKSTQIQLLAQYLEKRGKKVIL 33 (197)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHCCC-EEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 37999997 6889999999999999999998853
No 120
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=73.07 E-value=5 Score=40.97 Aligned_cols=90 Identities=18% Similarity=0.245 Sum_probs=53.3
Q ss_pred eEEEEEeccC--CchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHH----------HHHH-ccCCC
Q 012331 298 VRIAMVGKYT--GLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKA----------AWKL-LKGAD 364 (466)
Q Consensus 298 v~IaIVgkY~--g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~----------~~~~-L~~~D 364 (466)
-+|+||+|+. ........+.+.|...|+.+.+ +.+..+......+. .|.. ..+. -..+|
T Consensus 39 k~I~iv~K~~~~~~~~~~~~l~~~L~~~~~~V~v-------e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D 110 (365)
T 3pfn_A 39 KSVLVIKKMRDASLLQPFKELCTHLMEENMIVYV-------EKKVLEDPAIASDE-SFGAVKKKFCTFREDYDDISNQID 110 (365)
T ss_dssp CEEEEEECTTCGGGHHHHHHHHHHHHHTSCEEEE-------EHHHHHSHHHHHCS-TTHHHHHHCEEECTTTCCCTTTCS
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHHHCCCEEEE-------ehHHhhhhcccccc-ccccccccccccccChhhcccCCC
Confidence 3799999972 2334567788999998876654 22111100000000 0000 0011 24689
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHHcCCcEEEehHH
Q 012331 365 GILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (466)
Q Consensus 365 GIllPGGfG~rg~eG~i~aIk~are~~iPvLGICLG 400 (466)
-||.-||=|. .+.+++++....+|+|||=+|
T Consensus 111 lvI~lGGDGT-----~L~aa~~~~~~~~PvlGiN~G 141 (365)
T 3pfn_A 111 FIICLGGDGT-----LLYASSLFQGSVPPVMAFHLG 141 (365)
T ss_dssp EEEEESSTTH-----HHHHHHHCSSSCCCEEEEESS
T ss_pred EEEEEcChHH-----HHHHHHHhccCCCCEEEEcCC
Confidence 9999998652 567777777778999999887
No 121
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=72.61 E-value=1.5 Score=39.33 Aligned_cols=36 Identities=22% Similarity=0.415 Sum_probs=31.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
++|.|+| .||-||...+..|...|..+|++|..++.
T Consensus 1 ~~I~i~G--~~GsGKsTl~~~L~~~l~~~g~~v~~~~~ 36 (214)
T 1gtv_A 1 MLIAIEG--VDGAGKRTLVEKLSGAFRAAGRSVATLAF 36 (214)
T ss_dssp CEEEEEE--EEEEEHHHHHHHHHHHHHEEEEEEEEEES
T ss_pred CEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEee
Confidence 4788888 68999999999999999999999987763
No 122
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=72.44 E-value=5.1 Score=39.68 Aligned_cols=39 Identities=21% Similarity=0.414 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
+.|.|+| . +|.||=.+++.|+.+|+..|.+|.++-.|+|
T Consensus 106 ~vI~ivG-~-~G~GKTT~~~~LA~~l~~~g~kVllid~D~~ 144 (320)
T 1zu4_A 106 NIFMLVG-V-NGTGKTTSLAKMANYYAELGYKVLIAAADTF 144 (320)
T ss_dssp EEEEEES-S-TTSSHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred eEEEEEC-C-CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 5788887 4 9999999999999999999999999999986
No 123
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=71.85 E-value=2.2 Score=44.18 Aligned_cols=40 Identities=30% Similarity=0.476 Sum_probs=36.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
+.|.++|- .|.||=.+++.|+..|+.+|++|.++-.|||-
T Consensus 100 ~vI~ivG~--~GvGKTTla~~La~~l~~~G~kVllv~~D~~r 139 (432)
T 2v3c_C 100 NVILLVGI--QGSGKTTTAAKLARYIQKRGLKPALIAADTYR 139 (432)
T ss_dssp CCEEEECC--SSSSTTHHHHHHHHHHHHHHCCEEEECCSCCC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEeccccC
Confidence 36778883 89999999999999999999999999999984
No 124
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=71.68 E-value=2.9 Score=37.63 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=33.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
|+.+.|+| -||-||=..+..|..+++.+|+++-.+|+|+.
T Consensus 2 ~~~v~IvG--~SGsGKSTL~~~L~~~~~~~g~~~G~I~~dg~ 41 (171)
T 2f1r_A 2 SLILSIVG--TSDSGKTTLITRMMPILRERGLRVAVVKRHAH 41 (171)
T ss_dssp -CEEEEEE--SCHHHHHHHHHHHHHHHHHTTCCEEEEEC---
T ss_pred ceEEEEEC--CCCCCHHHHHHHHHHHhhhcCCceEEEEEcCc
Confidence 47788999 79999999999999999999999999999874
No 125
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=70.78 E-value=2.2 Score=39.01 Aligned_cols=34 Identities=29% Similarity=0.400 Sum_probs=24.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
||-++||||- +|||+.++ +.|.++|++|.+.=.+
T Consensus 1 Mk~vlVTGas-~gIG~~~a-----~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGAS-SGLGAELA-----KLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTT-SHHHHHHH-----HHHHHTTCCEEEEESC
T ss_pred CCEEEEecCC-chHHHHHH-----HHHHHCCCEEEEEeCC
Confidence 7889999996 78887554 5677889998876443
No 126
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=69.53 E-value=4.7 Score=39.11 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
|.|.||++ -.|.||=.+|+.|+..|...|.||-++-.||.
T Consensus 93 kvI~vts~-kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 93 NVLMMTGV-SPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp CEEEEEES-SSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred eEEEEECC-CCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 67788875 46899999999999999999999999999985
No 127
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=68.85 E-value=6.7 Score=38.65 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=36.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
+.|.++|- +|-||=.+++.|+.+|+..|.+|.++-.|+|-
T Consensus 105 ~vi~ivG~--~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~~r 144 (306)
T 1vma_A 105 FVIMVVGV--NGTGKTTSCGKLAKMFVDEGKSVVLAAADTFR 144 (306)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECTTC
T ss_pred eEEEEEcC--CCChHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 57889983 99999999999999999999999999999863
No 128
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=66.75 E-value=5.9 Score=38.67 Aligned_cols=39 Identities=26% Similarity=0.492 Sum_probs=34.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEEeeeccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTCIKIDPY 42 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~-~g~~v~~~K~DpY 42 (466)
+.|.++|- +|.||=.+++.|+.+|+. +|.+|.++-.|||
T Consensus 106 ~vi~lvG~--~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~~ 145 (296)
T 2px0_A 106 KYIVLFGS--TGAGKTTTLAKLAAISMLEKHKKIAFITTDTY 145 (296)
T ss_dssp SEEEEEES--TTSSHHHHHHHHHHHHHHTTCCCEEEEECCCS
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHHHhcCCEEEEEecCcc
Confidence 35677764 799999999999999995 8999999999997
No 129
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=66.59 E-value=12 Score=33.46 Aligned_cols=94 Identities=16% Similarity=0.130 Sum_probs=56.5
Q ss_pred eEEEEEeccCCc-hh--hHHHHHHHHHHcCCceeEEeEEEEeeCCCccccc---ccCCchhhHHHHHHccCCCEEEecCC
Q 012331 298 VRIAMVGKYTGL-SD--AYLSILKALLHASVDLRKKLVIDWIPACDLEDAT---EKENPDAYKAAWKLLKGADGILVPGG 371 (466)
Q Consensus 298 v~IaIVgkY~g~-~D--ay~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~---~~~~p~~y~~~~~~L~~~DGIllPGG 371 (466)
++|=+.|...+. .+ .|..+.+.|+..| .+- . .|+..+.++... .......|....+.+.++|.||.-..
T Consensus 3 mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~Vl---~-~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~ 77 (152)
T 4fyk_A 3 RSVYFCGSIRGGREDQALYARIVSRLRRYG-KVL---T-EHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT 77 (152)
T ss_dssp CEEEEECCSTTCCTTHHHHHHHHHHHTTTS-EEC---C-CC-------------CCCHHHHHHHHHHHHHHCSEEEEECS
T ss_pred ceEEEECCCCCcHHHHHHHHHHHHHHHHcC-ccc---c-cccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC
Confidence 577787876442 33 6688999999988 431 1 345443332210 00122344444566789999887432
Q ss_pred CCCCCchhHHHHHHHHHHcCCcEEEehH
Q 012331 372 FGNRGVQGKILAAKYAREHRIPYLGICL 399 (466)
Q Consensus 372 fG~rg~eG~i~aIk~are~~iPvLGICL 399 (466)
....|..-.+-+|...++|+++.|.
T Consensus 78 ---~~d~Gt~~EiG~A~algkPV~~l~~ 102 (152)
T 4fyk_A 78 ---QPSLGVGYELGRAVALGKPILCLFR 102 (152)
T ss_dssp ---SCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ---CCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 3346777788899999999999986
No 130
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=65.75 E-value=5.8 Score=34.51 Aligned_cols=33 Identities=27% Similarity=0.272 Sum_probs=27.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
++|++||+ +|-||...+.-|...|...|+.|..
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~~i~ 33 (195)
T 2pbr_A 1 MLIAFEGI--DGSGKTTQAKKLYEYLKQKGYFVSL 33 (195)
T ss_dssp CEEEEECS--TTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 46899998 6779999999999999888987654
No 131
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=64.11 E-value=5.1 Score=37.29 Aligned_cols=31 Identities=29% Similarity=0.326 Sum_probs=24.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
||-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 1 Mk~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 31 (254)
T 1zmt_A 1 MSTAIVTNVK-HFGGMGS-----ALRLSEAGHTVACH 31 (254)
T ss_dssp -CEEEESSTT-STTHHHH-----HHHHHHTTCEEEEC
T ss_pred CeEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 7889999996 8999764 45677789988765
No 132
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=63.91 E-value=4.9 Score=34.17 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=33.2
Q ss_pred HccCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 359 LLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 359 ~L~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.++.+|++++.-|.-...-......|+.|.+.++|++||
T Consensus 35 ~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV 73 (111)
T 1eiw_A 35 TPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITV 73 (111)
T ss_dssp CSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEE
T ss_pred ccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEE
Confidence 477899999888877766667778889999999999999
No 133
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=63.67 E-value=9 Score=38.35 Aligned_cols=43 Identities=23% Similarity=0.392 Sum_probs=36.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHH------CCCeeEEeeeccccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKA------CGLRVTCIKIDPYLN 44 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~------~g~~v~~~K~DpYln 44 (466)
+|.|.|++|- -|.||=.+|++++..|.. +|+||-++-+||.-|
T Consensus 108 ~~vIav~s~K-GGvGKTT~a~nLA~~La~~~~~~~~g~rVlliD~D~q~~ 156 (398)
T 3ez2_A 108 AYVIFISNLK-GGVSKTVSTVSLAHAMRAHPHLLMEDLRILVIDLDPQSS 156 (398)
T ss_dssp CEEEEECCSS-SSSSHHHHHHHHHHHHHHCTTTGGGCCCEEEEEECTTCH
T ss_pred CeEEEEEeCC-CCccHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCC
Confidence 3667777654 789999999999999984 799999999999654
No 134
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=63.56 E-value=5.9 Score=38.82 Aligned_cols=93 Identities=26% Similarity=0.299 Sum_probs=47.1
Q ss_pred EEEEEeccCC--chhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcc-----ccccc--C-CchhhHHHHHHccCCCEEEe
Q 012331 299 RIAMVGKYTG--LSDAYLSILKALLHASVDLRKKLVIDWIPACDLE-----DATEK--E-NPDAYKAAWKLLKGADGILV 368 (466)
Q Consensus 299 ~IaIVgkY~g--~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~-----~~~~~--~-~p~~y~~~~~~L~~~DGIll 368 (466)
+|+++.+... .......+.+.|+..|+++.+... .++.+. ..... . ....+........++|.|++
T Consensus 6 ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi~ 81 (307)
T 1u0t_A 6 SVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA----EAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLV 81 (307)
T ss_dssp EEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CCCEEE
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc----hhhhhhcccccccccccccccccccccccccccCCCEEEE
Confidence 6888877522 122456788889999887654211 011110 00000 0 00000000012346899999
Q ss_pred cCCCCCCCchhHHHHHHHHHHcCCcEEEehHH
Q 012331 369 PGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (466)
Q Consensus 369 PGGfG~rg~eG~i~aIk~are~~iPvLGICLG 400 (466)
-||=|. ...+++.+...++|+|||=+|
T Consensus 82 ~GGDGT-----~l~a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 82 LGGDGT-----FLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp EECHHH-----HHHHHHHHHHHTCCEEEEECS
T ss_pred EeCCHH-----HHHHHHHhccCCCCEEEEeCC
Confidence 997432 566777777778999999766
No 135
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=63.51 E-value=8.6 Score=37.55 Aligned_cols=40 Identities=30% Similarity=0.502 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
+.|.++| .+|.||=.+++.++..|..+|.+|.++-.|||-
T Consensus 99 ~vi~i~G--~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 99 YVIMLVG--VQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEEEEC--SSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4677775 499999999999999999999999999999974
No 136
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=63.49 E-value=5.4 Score=36.74 Aligned_cols=34 Identities=26% Similarity=0.571 Sum_probs=25.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
||-|+||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 1 mk~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISGCA-TGIGAAT-----RKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 7889999984 6777654 45677789999886443
No 137
>2oyn_A Hypothetical protein MJ0056; structural genomics, unknown function, PSI-2, protein structure initiative; HET: CDP; 1.85A {Methanocaldococcus jannaschii DSM2661} SCOP: b.43.5.2 PDB: 2p3m_A 2vbs_A 2vbt_A* 2vbu_A* 2vbv_A*
Probab=63.21 E-value=2.7 Score=37.69 Aligned_cols=31 Identities=39% Similarity=0.633 Sum_probs=26.0
Q ss_pred EEEEEeCCccCCcchHHHHHHH----HHHHHHCCC
Q 012331 2 KYVLVTGGVVSGLGKGVTASSI----GVLLKACGL 32 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~----g~ll~~~g~ 32 (466)
|-+-++|=|+||+|+|----|+ -...+..||
T Consensus 5 ~~i~l~G~VvSGlGEG~~y~sl~~Y~~qf~~~LGF 39 (146)
T 2oyn_A 5 KLMIIEGEVVSGLGEGRYFLSLPPYKEIFKKILGF 39 (146)
T ss_dssp CEEEEEEEEECCSSHHHHHTTSHHHHHHHHHHHSS
T ss_pred eEEEEEEEEEccccceEEEEeCHHHHHHHHHHhCC
Confidence 5678999999999999988887 566777787
No 138
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=60.56 E-value=11 Score=39.93 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=35.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
+.|.++|- .|.||=.+++.|+..|+.+|.+|.++-.|||-
T Consensus 102 ~vI~ivG~--~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 102 NVIMFVGL--QGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 45777754 79999999999999999999999999999974
No 139
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=59.58 E-value=12 Score=33.62 Aligned_cols=41 Identities=22% Similarity=0.268 Sum_probs=35.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln 44 (466)
..|.++|+ ||-||-..+..|..+|+..|.+|...-.|.+..
T Consensus 23 ~~i~i~G~--~GsGKstl~~~l~~~~~~~~~~v~~~~~d~~~~ 63 (201)
T 1rz3_A 23 LVLGIDGL--SRSGKTTLANQLSQTLREQGISVCVFHMDDHIV 63 (201)
T ss_dssp EEEEEEEC--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGCC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCeEEEeccCcccC
Confidence 56889997 888999999999999999999998888887643
No 140
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=59.49 E-value=7.6 Score=39.03 Aligned_cols=45 Identities=22% Similarity=0.365 Sum_probs=30.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH------HCCCeeEEeeecccccCC
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK------ACGLRVTCIKIDPYLNTD 46 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~------~~g~~v~~~K~DpYln~d 46 (466)
+|.|.|++| --|.||=.+|++++..|. .+|+||-++-+||.-|..
T Consensus 111 ~~vIav~s~-KGGvGKTT~a~nLA~~LA~~g~~~~~g~rVlliD~D~~~~l~ 161 (403)
T 3ez9_A 111 PYVIFVVNL-KGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLDPQASST 161 (403)
T ss_dssp CEEEEECCC---------CHHHHHHHHHSCGGGGGGCCCEEEEEESSSSGGG
T ss_pred ceEEEEEcC-CCCchHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCChh
Confidence 366777754 367899999999999998 689999999999976644
No 141
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=59.47 E-value=11 Score=36.30 Aligned_cols=88 Identities=23% Similarity=0.172 Sum_probs=47.6
Q ss_pred EEEEEeccC--CchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCC
Q 012331 299 RIAMVGKYT--GLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (466)
Q Consensus 299 ~IaIVgkY~--g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg 376 (466)
+|+++.+.. ........+.+.|+..|+++.+. .-.++.+.... .+ .. .......++|.|++-||=|.
T Consensus 7 ki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~----~~~~~~~~~~~---~~-~~-~~~~~~~~~D~vi~~GGDGT-- 75 (292)
T 2an1_A 7 CIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVE----QQIAHELQLKN---VP-TG-TLAEIGQQADLAVVVGGDGN-- 75 (292)
T ss_dssp EEEEECC-------CHHHHHHHHHHHTTCEEEEE----HHHHHHTTCSS---CC-EE-CHHHHHHHCSEEEECSCHHH--
T ss_pred EEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEe----cchhhhccccc---cc-cc-chhhcccCCCEEEEEcCcHH--
Confidence 688886532 11234567889999999876542 00000000000 00 00 00112246899999998432
Q ss_pred chhHHHHHHHHHHcCCcEEEehHH
Q 012331 377 VQGKILAAKYAREHRIPYLGICLG 400 (466)
Q Consensus 377 ~eG~i~aIk~are~~iPvLGICLG 400 (466)
..++++.+.+.++|+|||=+|
T Consensus 76 ---~l~a~~~~~~~~~P~lGI~~G 96 (292)
T 2an1_A 76 ---MLGAARTLARYDINVIGINRG 96 (292)
T ss_dssp ---HHHHHHHHTTSSCEEEEBCSS
T ss_pred ---HHHHHHHhhcCCCCEEEEECC
Confidence 456666776678999999655
No 142
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=58.72 E-value=10 Score=33.70 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=29.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
++|++||+ +|-||...+.-|...|...|++|...
T Consensus 10 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~~~~v~~~ 43 (215)
T 1nn5_A 10 ALIVLEGV--DRAGKSTQSRKLVEALCAAGHRAELL 43 (215)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 57999996 78899999999999999999998543
No 143
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=57.35 E-value=9.9 Score=35.79 Aligned_cols=40 Identities=20% Similarity=0.385 Sum_probs=32.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
|++|+++|. +|-||...|..|...|...|+.+..+-.|.+
T Consensus 4 ~~lIvl~G~--pGSGKSTla~~La~~L~~~g~~~i~~~~D~~ 43 (260)
T 3a4m_A 4 IMLIILTGL--PGVGKSTFSKNLAKILSKNNIDVIVLGSDLI 43 (260)
T ss_dssp CEEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEECTHHH
T ss_pred CEEEEEEcC--CCCCHHHHHHHHHHHHHhCCCEEEEECchHH
Confidence 478999997 8999999999999999989987764433433
No 144
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=56.70 E-value=11 Score=38.80 Aligned_cols=57 Identities=18% Similarity=0.235 Sum_probs=39.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg 64 (466)
|.|-||| +=||+.|++=|+.+|++.|++.+. .+.--+| +.|...-.+..+++|.+=|
T Consensus 119 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 175 (475)
T 1p3d_A 119 HGIAVAG----THGKTTTTAMISMIYTQAKLDPTF-VNGGLVK-SAGKNAHLGASRYLIAEAD 175 (475)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCccc-ccccccccCCCCEEEEEec
Confidence 5788888 569999999999999999998543 3343334 3332111234578888876
No 145
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=56.21 E-value=9.9 Score=38.61 Aligned_cols=39 Identities=23% Similarity=0.219 Sum_probs=33.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
|+++|++| -.|.||=.+|++++..|..+|.||-++-. |-
T Consensus 2 ~~i~~~~g--kGG~GKTt~a~~la~~la~~g~~vllvd~-~~ 40 (374)
T 3igf_A 2 ALILTFLG--KSGVARTKIAIAAAKLLASQGKRVLLAGL-AE 40 (374)
T ss_dssp CEEEEEEC--SBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SC
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CC
Confidence 46777776 44999999999999999999999999987 63
No 146
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=55.31 E-value=13 Score=37.77 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=28.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.|-||| +=|||.|++=|..+|++.|++|...
T Consensus 50 ~vI~VTG----TnGKtTT~~~l~~iL~~~G~~~g~~ 81 (422)
T 1w78_A 50 FVFTVAG----TNGKGTTCRTLESILMAAGYKVGVY 81 (422)
T ss_dssp EEEEEEC----SSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEeC----CcChHHHHHHHHHHHHHCCCCEEEE
Confidence 6788888 4799999999999999999998765
No 147
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=54.61 E-value=15 Score=34.01 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=30.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
+||.+.|. +|-||+..+.-|...|+.+|++|...+
T Consensus 7 ~~i~~eG~--~gsGKsT~~~~l~~~l~~~~~~v~~~~ 41 (213)
T 4edh_A 7 LFVTLEGP--EGAGKSTNRDYLAERLRERGIEVQLTR 41 (213)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHHHcCCCccccc
Confidence 68999985 799999999999999999999986554
No 148
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=54.13 E-value=8.9 Score=34.86 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=24.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
+|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 2 ~k~vlITGas-~gIG~~-----ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEA-----IARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 5889999985 777764 45667788998877543
No 149
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=54.11 E-value=13 Score=38.53 Aligned_cols=57 Identities=19% Similarity=0.332 Sum_probs=39.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg 64 (466)
|.|-||| +=||+.|++=|+.+|++.|++.+. ++.--+| +.|...-.+..+++|.+=|
T Consensus 120 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 176 (491)
T 2f00_A 120 HGIAIAG----THGKTTTTAMVSSIYAEAGLDPTF-VNGGLVK-AAGVHARLGHGRYLIAEAD 176 (491)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCeec-cccccccCCCCCEEEEEeC
Confidence 5788888 569999999999999999998543 3333333 3332111234578888876
No 150
>1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} SCOP: c.59.1.2 c.72.2.2 PDB: 1fgs_A* 1jbv_A* 2gca_A 2gc5_A* 2gc6_A* 2gcb_A
Probab=53.64 E-value=12 Score=37.94 Aligned_cols=32 Identities=44% Similarity=0.657 Sum_probs=28.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.|-||| +=|||.|++=|..+|++.|++|...
T Consensus 40 ~vI~VtG----TnGKtTT~~~l~~iL~~~G~~vg~~ 71 (428)
T 1jbw_A 40 RYIHVTG----TNGKGSAANAIAHVLEASGLTVGLY 71 (428)
T ss_dssp CEEEEEC----SSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEEC----CCChHHHHHHHHHHHHHCCCCEEEE
Confidence 5788888 4799999999999999999998654
No 151
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=52.82 E-value=5 Score=38.65 Aligned_cols=35 Identities=26% Similarity=0.387 Sum_probs=25.0
Q ss_pred CCCEEEecCCCCCCCchhHHHHHHHHHHc--CCcEEEehHHH
Q 012331 362 GADGILVPGGFGNRGVQGKILAAKYAREH--RIPYLGICLGM 401 (466)
Q Consensus 362 ~~DGIllPGGfG~rg~eG~i~aIk~are~--~iPvLGICLGm 401 (466)
++|.|++-||=|. ...+++.+... ++|+|||=+|.
T Consensus 35 ~~D~vv~lGGDGT-----~l~aa~~~~~~~~~~PilGIn~G~ 71 (272)
T 2i2c_A 35 EPEIVISIGGDGT-----FLSAFHQYEERLDEIAFIGIHTGH 71 (272)
T ss_dssp SCSEEEEEESHHH-----HHHHHHHTGGGTTTCEEEEEESSS
T ss_pred CCCEEEEEcCcHH-----HHHHHHHHhhcCCCCCEEEEeCCC
Confidence 5699999997431 44566666554 89999997763
No 152
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=52.36 E-value=9.7 Score=35.09 Aligned_cols=33 Identities=30% Similarity=0.480 Sum_probs=24.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
+|-++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 3 ~k~vlVTGas-~GIG~a-----~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAG-SGLGRA-----LTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 3789999986 777775 45667788999877643
No 153
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=52.22 E-value=15 Score=32.71 Aligned_cols=34 Identities=32% Similarity=0.426 Sum_probs=25.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|| |+||||- |-+.+.+.+.|.++|++|.++--+|
T Consensus 1 Mk-ilVtGat------G~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MK-IAVLGAT------GRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CE-EEEEcCC------CHHHHHHHHHHHHCCCEEEEEEecc
Confidence 67 8999974 4444566677778899999886554
No 154
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=52.17 E-value=11 Score=31.59 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=25.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
+.|+|+|+ |-...++...|..+|++|.++-.||
T Consensus 7 ~~v~I~G~-------G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS-------EAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC-------SHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC-------CHHHHHHHHHHHHCCCeEEEEECCH
Confidence 45777775 4477889999999999999886654
No 155
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=52.15 E-value=8.2 Score=35.05 Aligned_cols=31 Identities=26% Similarity=0.543 Sum_probs=23.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
+|.|+||||- ++||+.+ .+.|.++|++|.+.
T Consensus 1 ~k~vlITGas-ggiG~~~-----a~~l~~~G~~v~~~ 31 (245)
T 2ph3_A 1 MRKALITGAS-RGIGRAI-----ALRLAEDGFALAIH 31 (245)
T ss_dssp CCEEEETTTT-SHHHHHH-----HHHHHTTTCEEEEE
T ss_pred CCEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 5889999994 7777754 45666789887764
No 156
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=52.10 E-value=13 Score=32.04 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=27.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
++|+++|. +|-||...+..|...|...|++...+
T Consensus 4 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~~~i 37 (192)
T 1kht_A 4 KVVVVTGV--PGVGSTTSSQLAMDNLRKEGVNYKMV 37 (192)
T ss_dssp CEEEEECC--TTSCHHHHHHHHHHHHHTTTCCCEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCcceEEE
Confidence 48999995 89999999999999888877544333
No 157
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=51.91 E-value=12 Score=38.36 Aligned_cols=32 Identities=41% Similarity=0.578 Sum_probs=28.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.|=|||- =|||-|++-|..+|++.||||-..
T Consensus 53 ~vI~VtGT----NGKgSt~~~l~~iL~~~G~~vg~~ 84 (437)
T 3nrs_A 53 KIFTVAGT----NGKGTTCCTLEAILLAAGLRVGVY 84 (437)
T ss_dssp EEEEEECS----SSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECC----cChHHHHHHHHHHHHHCCCcEEEE
Confidence 67888884 699999999999999999999653
No 158
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=51.51 E-value=15 Score=34.14 Aligned_cols=79 Identities=16% Similarity=0.261 Sum_probs=53.6
Q ss_pred EEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCc
Q 012331 112 QVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGE 191 (466)
Q Consensus 112 qviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e 191 (466)
.|||-|.|+ +.++++- ..++++|++ ++|+++.+. +.+.+++.. | ...|||+.++--++
T Consensus 11 piI~Avr~~--~~l~~al-------~s~~~~ifl-l~g~i~~l~-----~~v~~lk~~-~--K~v~Vh~Dli~Gls---- 68 (192)
T 3kts_A 11 SIIPAAHNQ--KDMEKIL-------ELDLTYMVM-LETHVAQLK-----ALVKYAQAG-G--KKVLLHADLVNGLK---- 68 (192)
T ss_dssp CEEEEESSS--HHHHHHT-------TSSCCEEEE-CSEETTTHH-----HHHHHHHHT-T--CEEEEEGGGEETCC----
T ss_pred CEEEEecCH--HHHHHHH-------cCCCCEEEE-ecCcHHHHH-----HHHHHHHHc-C--CeEEEecCchhccC----
Confidence 578887765 3345543 345788888 777776653 455555543 3 48999999988773
Q ss_pred cccCchhhhHHHhhcCCCcccEEEEe
Q 012331 192 QKTKPTQHSVRGLRGQGLTPNILACR 217 (466)
Q Consensus 192 ~KtKptQhsvk~LrS~GI~pd~lV~R 217 (466)
+-+.+++-|. .+..||+||--
T Consensus 69 ----~d~~ai~fL~-~~~~pdGIIsT 89 (192)
T 3kts_A 69 ----NDDYAIDFLC-TEICPDGIIST 89 (192)
T ss_dssp ----CSHHHHHHHH-HTTCCSEEEES
T ss_pred ----CcHHHHHHHH-hCCCCCEEEeC
Confidence 4567787665 48899998754
No 159
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=51.38 E-value=11 Score=34.63 Aligned_cols=31 Identities=29% Similarity=0.278 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
+|.++||||- +|||+.++ +.|.++|++|.+.
T Consensus 1 ~k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTHAR-HFAGPAAV-----EALTQDGYTVVCH 31 (244)
T ss_dssp -CEEEESSTT-STTHHHHH-----HHHHHTTCEEEEC
T ss_pred CCEEEEECCC-ChHHHHHH-----HHHHHCCCEEEEe
Confidence 4789999985 89998654 5666789988764
No 160
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=51.31 E-value=15 Score=32.08 Aligned_cols=39 Identities=33% Similarity=0.344 Sum_probs=33.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
++|+++|- +|-||-..+..|...|...|++|..+.-|.+
T Consensus 14 ~~i~l~G~--~GsGKsT~~~~L~~~l~~~~~~~~~~~~d~~ 52 (186)
T 2yvu_A 14 IVVWLTGL--PGSGKTTIATRLADLLQKEGYRVEVLDGDWA 52 (186)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEHHHH
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHHHhcCCeEEEeeHHHH
Confidence 57888985 8999999999999999999999888766654
No 161
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=51.21 E-value=18 Score=31.95 Aligned_cols=34 Identities=32% Similarity=0.313 Sum_probs=24.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|| |+||||- |-+.+.+.+.|.++|++|.++--+|
T Consensus 1 Mk-vlVtGat------G~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MK-IGIIGAT------GRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred Ce-EEEEcCC------chhHHHHHHHHHhCCCEEEEEEcCc
Confidence 56 8999974 3444566677888899999876553
No 162
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=51.07 E-value=22 Score=31.74 Aligned_cols=62 Identities=11% Similarity=0.120 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCc-------chHHHHHHHhhhhcCCCCEEEEEeeeeeeec
Q 012331 118 TDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIES-------MPFIEALGQFSYRVGPGNFCLIHVSLVPVLN 187 (466)
Q Consensus 118 t~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs-------~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~ 187 (466)
|..+..|+.+... ..+||+|+|.+|. .|+-. .-+.+-++++-......++-.+-+|..|.-.
T Consensus 63 t~~~l~r~~~~v~------~~~Pd~vvi~~G~--ND~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~~ 131 (209)
T 4hf7_A 63 SYQFLLRFREDVI------NLSPALVVINAGT--NDVAENTGAYNEDYTFGNIASMAELAKANKIKVILTSVLPAAE 131 (209)
T ss_dssp HHHHHHHHHHHTG------GGCCSEEEECCCH--HHHTTSSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSC
T ss_pred HHHHHHHHHHHHH------hcCCCEEEEEeCC--CcCccccccccHHHHHHHHHHhhHHHhccCceEEEEeeeccCc
Confidence 4556667766331 3579999999985 45421 1233344544333322345555556666543
No 163
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=50.92 E-value=20 Score=36.98 Aligned_cols=38 Identities=24% Similarity=0.215 Sum_probs=31.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln 44 (466)
|.|-||| +=||+.|++=|+.+|++.|+++.. .+-|.+|
T Consensus 115 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~~~~-~~~g~~~ 152 (469)
T 1j6u_A 115 EEFAVTG----TDGKTTTTAMVAHVLKHLRKSPTV-FLGGIMD 152 (469)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCCEE-ECSSCCT
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceE-EECCeec
Confidence 5788888 569999999999999999999853 4566654
No 164
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=50.57 E-value=15 Score=31.30 Aligned_cols=38 Identities=13% Similarity=0.076 Sum_probs=30.0
Q ss_pred CCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEehHHHHHHH
Q 012331 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (466)
Q Consensus 362 ~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGICLGmQlla 405 (466)
++.+|++..||-+ -++.+.|++.++.++|=|+|+++-.
T Consensus 82 g~k~v~~~~G~~~------~e~~~~a~~~Girvv~nC~gv~l~~ 119 (122)
T 3ff4_A 82 KPKRVIFNPGTEN------EELEEILSENGIEPVIGCTLVMLSA 119 (122)
T ss_dssp CCSEEEECTTCCC------HHHHHHHHHTTCEEEESCHHHHHHH
T ss_pred CCCEEEECCCCCh------HHHHHHHHHcCCeEECCcCeEEecC
Confidence 5677888887742 3677888999999999999998743
No 165
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=50.11 E-value=8 Score=35.59 Aligned_cols=35 Identities=43% Similarity=0.606 Sum_probs=24.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
+|-++||||- ||||+.++- .|++..|++|...-.+
T Consensus 4 ~k~vlITGas-~gIG~~~a~----~l~~~~g~~v~~~~~~ 38 (244)
T 4e4y_A 4 MANYLVTGGS-KGIGKAVVE----LLLQNKNHTVINIDIQ 38 (244)
T ss_dssp CEEEEEETTT-SHHHHHHHH----HHTTSTTEEEEEEESS
T ss_pred CCeEEEeCCC-ChHHHHHHH----HHHhcCCcEEEEeccc
Confidence 5889999986 788876543 3444489988876544
No 166
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=50.10 E-value=18 Score=32.00 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=29.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
++|++||+ +|-||...+..|...|...+++|...
T Consensus 11 ~~I~l~G~--~GsGKST~~~~L~~~l~~~~~~~~~~ 44 (212)
T 2wwf_A 11 KFIVFEGL--DRSGKSTQSKLLVEYLKNNNVEVKHL 44 (212)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEcC--CCCCHHHHHHHHHHHHHHcCCcEEEE
Confidence 57999997 67899999999999999999988543
No 167
>1o5z_A Folylpolyglutamate synthase/dihydrofolate synthas; TM0166, structural genomics, JC protein structure initiative; 2.10A {Thermotoga maritima} SCOP: c.59.1.2 c.72.2.2
Probab=49.43 E-value=15 Score=37.64 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=28.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.|-||| +=|||.|++=|..+|++.|++|...
T Consensus 53 ~vI~VTG----TnGKtTT~~~l~~iL~~~G~~vg~~ 84 (442)
T 1o5z_A 53 KTIHIGG----TNGKGSVANMVSNILVSQGYRVGSY 84 (442)
T ss_dssp EEEEEEC----SSSHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CEEEEEC----CcCHHHHHHHHHHHHHHCCCCEEEE
Confidence 6788898 4799999999999999999998754
No 168
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=48.63 E-value=13 Score=34.39 Aligned_cols=34 Identities=26% Similarity=0.416 Sum_probs=25.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|.++||||- +|||+ .+.+.|.++|++|.+.-.++
T Consensus 23 k~vlITGas-~gIG~-----~la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 23 KNILVLGGS-GALGA-----EVVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCC-CHHHH-----HHHHHHHHCCCEEEEEeCCc
Confidence 789999996 67776 45567778899998875443
No 169
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=48.31 E-value=11 Score=34.38 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.=.
T Consensus 15 k~vlITGas-~gIG~~i-----a~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 15 RVILVTGAA-RGIGAAA-----ARAYAAHGASVVLLGR 46 (247)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEec
Confidence 689999995 7888754 5667788999877543
No 170
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=48.29 E-value=8.5 Score=34.90 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|.++||||- +|||+.++ +.|.++|++|.+.-.+
T Consensus 7 k~vlVTGas-~gIG~~~a-----~~l~~~G~~V~~~~r~ 39 (223)
T 3uce_A 7 TVYVVLGGT-SGIGAELA-----KQLESEHTIVHVASRQ 39 (223)
T ss_dssp EEEEEETTT-SHHHHHHH-----HHHCSTTEEEEEESGG
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEecCC
Confidence 789999986 78887655 5677889998876544
No 171
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=48.16 E-value=29 Score=29.66 Aligned_cols=75 Identities=9% Similarity=0.120 Sum_probs=39.9
Q ss_pred hHhhHHHHhhhhcCCCCCCeeEEc-----ccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc----CcchHHH
Q 012331 91 GKIYQSVIDKERKGDYLGKTVQVV-----PHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI----ESMPFIE 161 (466)
Q Consensus 91 gkiy~~vi~ker~g~ylg~tvqvi-----PHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdi----Es~pf~e 161 (466)
++-|...+++.=... |..++|+ =.-|....+++.+... ..+||+|+|++|+ .|+ ...-|.+
T Consensus 21 ~~~~~~~l~~~l~~~--~~~~~v~n~g~~G~~~~~~~~~~~~~~~------~~~pd~vvi~~G~--ND~~~~~~~~~~~~ 90 (185)
T 3hp4_A 21 EEGWVKLLQDKYDAE--QSDIVLINASISGETSGGALRRLDALLE------QYEPTHVLIELGA--NDGLRGFPVKKMQT 90 (185)
T ss_dssp GGSHHHHHHHHHHHT--TCCEEEEECCCTTCCHHHHHHHHHHHHH------HHCCSEEEEECCH--HHHHTTCCHHHHHH
T ss_pred cccHHHHHHHHHHhc--CCcEEEEECCcCCccHHHHHHHHHHHHh------hcCCCEEEEEeec--ccCCCCcCHHHHHH
Confidence 456666666542222 4455554 1234445555655431 2378999999995 453 2234555
Q ss_pred HHHHhhhhcCCCCE
Q 012331 162 ALGQFSYRVGPGNF 175 (466)
Q Consensus 162 a~rq~~~~~g~~n~ 175 (466)
.+++|-..+...+.
T Consensus 91 ~~~~~i~~~~~~~~ 104 (185)
T 3hp4_A 91 NLTALVKKSQAANA 104 (185)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 55555554443333
No 172
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=48.15 E-value=10 Score=35.31 Aligned_cols=29 Identities=31% Similarity=0.471 Sum_probs=24.8
Q ss_pred CcchHHHHHHHHHHHHH--CCCeeEEeeecc
Q 012331 13 GLGKGVTASSIGVLLKA--CGLRVTCIKIDP 41 (466)
Q Consensus 13 ~~gkgi~~as~g~ll~~--~g~~v~~~K~Dp 41 (466)
|=|||-|+|++|.-|++ +|+||-++-|++
T Consensus 36 G~GkGKTTaA~GlalRA~g~G~rV~~vQF~K 66 (196)
T 1g5t_A 36 GNGKGKTTAAFGTAARAVGHGKNVGVVQFIK 66 (196)
T ss_dssp SSSSCHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEEeeC
Confidence 45899999999998886 689999997777
No 173
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=47.93 E-value=46 Score=30.08 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=22.0
Q ss_pred cC-CCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 361 KG-ADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 361 ~~-~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.+ +|||++.+... . .....++.+.+.++|+.-+
T Consensus 57 ~~~vdgii~~~~~~-~---~~~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 57 QAPPDALILAPNSA-E---DLTPSVAQYRARNIPVLVV 90 (276)
T ss_dssp HSCCSEEEECCSST-T---TTHHHHHHHHHTTCCEEEE
T ss_pred hCCCCEEEEeCCCH-H---HHHHHHHHHHHCCCcEEEE
Confidence 36 99999987321 1 1234566777889998765
No 174
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=47.69 E-value=12 Score=34.74 Aligned_cols=31 Identities=39% Similarity=0.547 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
+|.++||||- +|||+ ++.+.|-++|++|.+.
T Consensus 7 ~k~vlVTGas-~gIG~-----~~a~~l~~~G~~v~~~ 37 (264)
T 3i4f_A 7 VRHALITAGT-KGLGK-----QVTEKLLAKGYSVTVT 37 (264)
T ss_dssp CCEEEETTTT-SHHHH-----HHHHHHHHTTCEEEEE
T ss_pred cCEEEEeCCC-chhHH-----HHHHHHHHCCCEEEEE
Confidence 4789999985 67776 4556677889988764
No 175
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=47.63 E-value=12 Score=34.56 Aligned_cols=32 Identities=34% Similarity=0.441 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 8 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 8 KVALITGAS-SGIGEAT-----ARALAAEGAAVAIAAR 39 (247)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 789999985 7788754 4667778999877543
No 176
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=47.40 E-value=1.2e+02 Score=27.77 Aligned_cols=80 Identities=16% Similarity=0.088 Sum_probs=43.0
Q ss_pred CeEEEEEeccCCchhhHH-----HHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEec
Q 012331 297 PVRIAMVGKYTGLSDAYL-----SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 369 (466)
Q Consensus 297 ~v~IaIVgkY~g~~Day~-----SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllP 369 (466)
+++||++-.. ..+.|. .+.++++..|+.+. +.++.+.+. .....+.+ .++|||++.
T Consensus 2 ~~~Ig~i~~~--~~~~~~~~~~~gi~~~a~~~g~~~~------~~~~~~~~~---------~~~~i~~l~~~~vdgiii~ 64 (306)
T 8abp_A 2 NLKLGFLVKQ--PEEPWFQTEWKFADKAGKDLGFEVI------KIAVPDGEK---------TLNAIDSLAASGAKGFVIC 64 (306)
T ss_dssp CEEEEEEESC--TTSHHHHHHHHHHHHHHHHHTEEEE------EEECCSHHH---------HHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEEeCC--CCchHHHHHHHHHHHHHHHcCCEEE------EeCCCCHHH---------HHHHHHHHHHcCCCEEEEe
Confidence 4789998643 333332 34455555665543 244432211 11112222 479999998
Q ss_pred CCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 370 GGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 370 GGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
+.- .......++.+.+.++|+.-+
T Consensus 65 ~~~----~~~~~~~~~~~~~~~iPvV~~ 88 (306)
T 8abp_A 65 TPD----PKLGSAIVAKARGYDMKVIAV 88 (306)
T ss_dssp CSC----GGGHHHHHHHHHHTTCEEEEE
T ss_pred CCC----chhhHHHHHHHHHCCCcEEEe
Confidence 731 123345577788889998644
No 177
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=47.05 E-value=12 Score=35.14 Aligned_cols=32 Identities=28% Similarity=0.397 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+.+ .+.|..+|++|.+.=.
T Consensus 13 k~vlITGas-~GIG~~~-----a~~L~~~G~~V~~~~r 44 (311)
T 3o26_A 13 RCAVVTGGN-KGIGFEI-----CKQLSSNGIMVVLTCR 44 (311)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred cEEEEecCC-chHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999986 8888754 4566678998877543
No 178
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=46.96 E-value=14 Score=31.26 Aligned_cols=25 Identities=20% Similarity=0.251 Sum_probs=18.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll 27 (466)
|+.|+++|+ ||-||...+.-|...|
T Consensus 1 M~~i~l~G~--~GsGKsT~~~~L~~~l 25 (173)
T 3kb2_A 1 MTLIILEGP--DCCFKSTVAAKLSKEL 25 (173)
T ss_dssp -CEEEEECS--SSSSHHHHHHHHHHHH
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHh
Confidence 678999995 8899988777666544
No 179
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=46.60 E-value=79 Score=30.03 Aligned_cols=86 Identities=13% Similarity=0.097 Sum_probs=51.9
Q ss_pred CeEEEEEeccCCchhhH----H---------HHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCC
Q 012331 297 PVRIAMVGKYTGLSDAY----L---------SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGA 363 (466)
Q Consensus 297 ~v~IaIVgkY~g~~Day----~---------SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~ 363 (466)
+++|.|..+|. +++. . -+.++|+..|+++.+ +..++.+.. .++ +.|+++
T Consensus 7 ~~~vlv~~~~~--h~~~~~~v~~~~p~g~~~~i~~~L~~~gf~V~~------~t~dd~~~~---~~~-------~~L~~~ 68 (252)
T 1t0b_A 7 PIRVVVWNEFR--HEKKDEQVRAIYPEGMHTVIASYLAEAGFDAAT------AVLDEPEHG---LTD-------EVLDRC 68 (252)
T ss_dssp CCEEEEEECCC--HHHHCHHHHHHCTTCHHHHHHHHHHHTTCEEEE------EESSSGGGG---CCH-------HHHHTC
T ss_pred CcEEEEECCcc--ccccchhhhccCchHHHHHHHHHHhhCCcEEEE------EeccCcccc---CCH-------hHHhcC
Confidence 46888888762 1221 1 237888888877664 222222110 011 568899
Q ss_pred CEEEecC-CCCCCCchhHHHHHHHHHHcCCcEEEehHH
Q 012331 364 DGILVPG-GFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (466)
Q Consensus 364 DGIllPG-GfG~rg~eG~i~aIk~are~~iPvLGICLG 400 (466)
|.||+-| ..++.-.....++++...+++.+++||=-|
T Consensus 69 DvvV~~~~~~~~~l~~~~~~al~~~V~~GgG~vgiH~a 106 (252)
T 1t0b_A 69 DVLVWWGHIAHDEVKDEVVERVHRRVLEGMGLIVLHSG 106 (252)
T ss_dssp SEEEEECSSCGGGSCHHHHHHHHHHHHTTCEEEEEGGG
T ss_pred CEEEEecCCCCCcCCHHHHHHHHHHHHcCCCEEEEccc
Confidence 9999843 122222234567788888899999999555
No 180
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=46.32 E-value=14 Score=34.32 Aligned_cols=32 Identities=25% Similarity=0.198 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- ||||+. +.+.|-++|++|.+.=.
T Consensus 8 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 8 ATVAVIGAG-DYIGAE-----IAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CEEEEECCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEeC
Confidence 679999986 777764 45667788999887643
No 181
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=46.30 E-value=1.1e+02 Score=29.48 Aligned_cols=90 Identities=6% Similarity=-0.053 Sum_probs=53.0
Q ss_pred CCeEEEEEeccCCchh---hHHHHHHHHHHcC-CceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCC
Q 012331 296 EPVRIAMVGKYTGLSD---AYLSILKALLHAS-VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGG 371 (466)
Q Consensus 296 ~~v~IaIVgkY~g~~D---ay~SI~~aL~~aG-~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGG 371 (466)
+++||.+++.-. -+| +-..+.+.|+..| +++.+. .+....+ +++.|+ +.|.++|.||+.-
T Consensus 3 ~~~kvLiv~G~~-~H~~~~~~~~l~~~l~~~g~f~V~~~-----~d~~~~~------d~~~f~---~~L~~~D~vV~~~- 66 (281)
T 4e5v_A 3 KPIKTLLITGQN-NHNWQVSHVVLKQILENSGRFDVDFV-----ISPEQGK------DMSGFV---LDFSPYQLVVLDY- 66 (281)
T ss_dssp CCEEEEEEESCC-SSCHHHHHHHHHHHHHHTTSEEEEEE-----ECCCTTS------CCTTCC---CCCTTCSEEEECC-
T ss_pred CceEEEEEcCCC-CCChHHHHHHHHHHHHhcCCEEEEEE-----eCCcccc------chhHHh---hhhhcCCEEEEeC-
Confidence 468899987642 233 2234667777777 666653 1111110 111121 2578999999643
Q ss_pred CCCCCchhHHHHHHHHHHcCCcEEEehHHH
Q 012331 372 FGNRGVQGKILAAKYAREHRIPYLGICLGM 401 (466)
Q Consensus 372 fG~rg~eG~i~aIk~are~~iPvLGICLGm 401 (466)
-++.-.....+++....+++.+++|+.-+.
T Consensus 67 ~~~~l~~~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 67 NGDSWPEETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp CSSCCCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred CCCcCCHHHHHHHHHHHHcCCCEEEEeccc
Confidence 333323445667777778899999998653
No 182
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=46.18 E-value=13 Score=35.46 Aligned_cols=32 Identities=38% Similarity=0.562 Sum_probs=25.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|-|+||||- ||||+.+ .+.|-+.|.+|.+.-.
T Consensus 3 K~vlVTGas-~GIG~ai-----a~~la~~Ga~V~~~~~ 34 (247)
T 3ged_A 3 RGVIVTGGG-HGIGKQI-----CLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEecCC-CHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999994 8888854 5678889999988644
No 183
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=46.11 E-value=14 Score=34.70 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.=
T Consensus 7 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 37 (274)
T 3e03_A 7 KTLFITGAS-RGIGLAI-----ALRAARDGANVAIAA 37 (274)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999997 8888754 466777899887753
No 184
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=45.97 E-value=17 Score=40.75 Aligned_cols=36 Identities=17% Similarity=0.228 Sum_probs=32.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-----CCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-----GLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~-----g~~v~~~K 38 (466)
|-|||+| .-|+.||=++++.|-++|+.+ |++|...|
T Consensus 35 ~~l~I~g-t~s~vGKT~vt~gL~r~l~~~~~~~~G~~V~~fK 75 (831)
T 4a0g_A 35 PTYLIWS-ANTSLGKTLVSTGIAASFLLQQPSSSATKLLYLK 75 (831)
T ss_dssp CEEEEEE-SSSSSCHHHHHHHHHHHHHSCSSCCTTCEEEEEE
T ss_pred ccEEEEE-CCCCCCHHHHHHHHHHHHHhcccccCCceEEEEc
Confidence 5567764 679999999999999999999 99999999
No 185
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=45.90 E-value=14 Score=34.81 Aligned_cols=33 Identities=39% Similarity=0.599 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|-|+||||- +|||+.+ .+.|-++|++|.+.-.+
T Consensus 15 k~vlVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 15 KVAIVTGGS-SGIGLAV-----VDALVRYGAKVVSVSLD 47 (269)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 779999986 7787754 45677889999876443
No 186
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=45.46 E-value=17 Score=33.72 Aligned_cols=31 Identities=29% Similarity=0.409 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 1 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 31 (248)
T 3asu_A 1 MIVLVTGAT-AGFGECI-----TRRFIQQGHKVIATG 31 (248)
T ss_dssp CEEEETTTT-STTHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 568999984 8899755 456777899988753
No 187
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=45.30 E-value=13 Score=34.48 Aligned_cols=30 Identities=43% Similarity=0.554 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+. +.+.|.++|++|.+.
T Consensus 7 k~vlVTGas-~gIG~a-----~a~~l~~~G~~V~~~ 36 (247)
T 3rwb_A 7 KTALVTGAA-QGIGKA-----IAARLAADGATVIVS 36 (247)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 777764 456777889998874
No 188
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=45.11 E-value=14 Score=33.65 Aligned_cols=30 Identities=33% Similarity=0.467 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- ++||+.+ .+.|.++|++|.+.
T Consensus 6 ~~vlItGas-ggiG~~~-----a~~l~~~G~~V~~~ 35 (247)
T 2hq1_A 6 KTAIVTGSS-RGLGKAI-----AWKLGNMGANIVLN 35 (247)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred cEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 679999985 7777654 45677789988765
No 189
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=45.10 E-value=16 Score=33.90 Aligned_cols=32 Identities=31% Similarity=0.528 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 8 k~~lVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 39 (257)
T 3tpc_A 8 RVFIVTGAS-SGLGAA-----VTRMLAQEGATVLGLDL 39 (257)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999995 777764 45677788999987643
No 190
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=44.89 E-value=16 Score=33.45 Aligned_cols=33 Identities=39% Similarity=0.597 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|.++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 3 k~vlVTGas-~giG~~-----~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 3 RKALVTGGS-RGIGRA-----IAEALVARGYRVAIASRN 35 (239)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 789999985 677764 456677889999876443
No 191
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=44.67 E-value=16 Score=34.74 Aligned_cols=31 Identities=32% Similarity=0.527 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+. +.+.|-.+|++|.+.-
T Consensus 30 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~~ 60 (277)
T 3gvc_A 30 KVAIVTGAG-AGIGLA-----VARRLADEGCHVLCAD 60 (277)
T ss_dssp CEEEETTTT-STHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999986 888875 4556777899988753
No 192
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=44.57 E-value=14 Score=34.90 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 17 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 48 (266)
T 3p19_A 17 KLVVITGAS-SGIGEA-----IARRFSEEGHPLLLLAR 48 (266)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCCEEEEES
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 689999995 777774 45677788999987643
No 193
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=44.46 E-value=28 Score=31.42 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=32.0
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 012331 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (466)
Q Consensus 111 vqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGt-vGdiEs~pf~ea~rq~ 166 (466)
..++|.=-++|++.|++... ..++|++|+ .||| +|+--=.| ||++++
T Consensus 59 ~~iv~Dd~~~I~~al~~a~~------~~~~DlVit-tGG~s~g~~D~t~--eal~~~ 106 (178)
T 2pjk_A 59 YSLVPDDKIKILKAFTDALS------IDEVDVIIS-TGGTGYSPTDITV--ETIRKL 106 (178)
T ss_dssp EEEECSCHHHHHHHHHHHHT------CTTCCEEEE-ESCCSSSTTCCHH--HHHGGG
T ss_pred EEEeCCCHHHHHHHHHHHHh------cCCCCEEEE-CCCCCCCCCcchH--HHHHHH
Confidence 35788888999999999873 235898886 7876 55533333 555544
No 194
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=44.18 E-value=16 Score=33.82 Aligned_cols=32 Identities=34% Similarity=0.538 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|-++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 38 (256)
T 2d1y_A 7 KGVLVTGGA-RGIGRAI-----AQAFAREGALVALCDL 38 (256)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999985 7777754 4567778999877643
No 195
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=44.11 E-value=14 Score=34.66 Aligned_cols=32 Identities=38% Similarity=0.446 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|-++||||- +|||+.+ .+.|-++|++|.+.-.
T Consensus 11 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 11 KTALVTGST-AGIGKAI-----ATSLVAEGANVLINGR 42 (267)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999985 7777654 4667788999887643
No 196
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=44.01 E-value=14 Score=33.70 Aligned_cols=31 Identities=32% Similarity=0.418 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+ ++.+.|-++|++|.+.-
T Consensus 6 k~vlITGas-~gIG~-----~~a~~l~~~G~~v~~~~ 36 (247)
T 3lyl_A 6 KVALVTGAS-RGIGF-----EVAHALASKGATVVGTA 36 (247)
T ss_dssp CEEEESSCS-SHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHH-----HHHHHHHHCCCEEEEEe
Confidence 789999985 77776 45566778899987653
No 197
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=43.98 E-value=15 Score=34.37 Aligned_cols=32 Identities=34% Similarity=0.422 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.-.
T Consensus 9 k~~lVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 9 AVAVVTGGS-SGIGLAT-----VELLLEAGAAVAFCAR 40 (265)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999985 7777654 4667778998877543
No 198
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=43.92 E-value=15 Score=34.85 Aligned_cols=30 Identities=40% Similarity=0.619 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 6 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 35 (281)
T 3zv4_A 6 EVALITGGA-SGLGRAL-----VDRFVAEGARVAVL 35 (281)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCcCEEEEE
Confidence 789999986 7777654 46677889998874
No 199
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=43.86 E-value=13 Score=34.59 Aligned_cols=32 Identities=31% Similarity=0.434 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+. +.+.|-++|++|.+.=.
T Consensus 8 k~~lVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 8 GLAIITGAS-QGIGAV-----IAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHHTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 689999996 777764 45566677998877643
No 200
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=43.70 E-value=17 Score=34.08 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=25.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.-.++
T Consensus 9 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~~ 42 (264)
T 2dtx_A 9 KVVIVTGAS-MGIGRAI-----AERFVDEGSKVIDLSIHD 42 (264)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEecCc
Confidence 679999985 7777654 566778899998875443
No 201
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=43.60 E-value=17 Score=33.56 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=25.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 8 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 8 KNVWVTGAG-KGIGYAT-----ALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeCc
Confidence 679999985 7777754 46677889999886544
No 202
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=43.59 E-value=15 Score=34.37 Aligned_cols=33 Identities=39% Similarity=0.524 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|.++||||- +|||+. +.+.|-++|++|.+.=.+
T Consensus 11 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTGGA-RGQGRS-----HAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCeEEEEccc
Confidence 789999986 677764 556777889999886433
No 203
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=43.48 E-value=14 Score=34.83 Aligned_cols=30 Identities=37% Similarity=0.627 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- ||||+. +.+.|-++|++|.+.
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~ 58 (269)
T 4dmm_A 29 RIALVTGAS-RGIGRA-----IALELAAAGAKVAVN 58 (269)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999986 777765 456677789988653
No 204
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=43.29 E-value=40 Score=29.80 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=46.0
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccC
Q 012331 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDD 63 (466)
Q Consensus 3 ~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~d 63 (466)
-++++|- +|.||=..+..++..+...|++|..+..+.+.+.-...+.-+....|.+.||
T Consensus 54 ~~ll~G~--~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vliiDe 112 (242)
T 3bos_A 54 AIYLWGP--VKSGRTHLIHAACARANELERRSFYIPLGIHASISTALLEGLEQFDLICIDD 112 (242)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGGGSCGGGGTTGGGSSEEEEET
T ss_pred eEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHHhccCCCEEEEec
Confidence 4778886 6999999999999999999999999888776654444444455566777776
No 205
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=43.25 E-value=14 Score=33.88 Aligned_cols=29 Identities=38% Similarity=0.646 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
|.++||||- +|||+. +.+.|-++|++|.+
T Consensus 14 k~vlITGas-~giG~~-----ia~~l~~~G~~v~~ 42 (256)
T 3ezl_A 14 RIAYVTGGM-GGIGTS-----ICQRLHKDGFRVVA 42 (256)
T ss_dssp EEEEETTTT-SHHHHH-----HHHHHHHTTEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEE
Confidence 789999995 777764 45667778988754
No 206
>2vos_A Folylpolyglutamate synthase protein FOLC; ligase, peptidoglycan synthesis, cell division; HET: ADP; 2.0A {Mycobacterium tuberculosis} PDB: 2vor_A*
Probab=42.98 E-value=22 Score=37.00 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=27.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
|.|-|||- =|||-|++=|..+|++.|++|-.
T Consensus 65 ~vI~VtGT----NGKtST~~~l~~iL~~~G~~vG~ 95 (487)
T 2vos_A 65 PSIHIAGT----NGKTSVARMVDALVTALHRRTGR 95 (487)
T ss_dssp CEEEEECS----SSHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEeCC----CCcHHHHHHHHHHHHHcCCCeEE
Confidence 57888884 69999999999999999999853
No 207
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=42.98 E-value=16 Score=34.83 Aligned_cols=70 Identities=20% Similarity=0.120 Sum_probs=43.9
Q ss_pred HHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCC------------CchhHH
Q 012331 314 LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR------------GVQGKI 381 (466)
Q Consensus 314 ~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~r------------g~eG~i 381 (466)
..+.++|+..++++.+ ++..+..+ ..| ...+.|.++|.||+.+-.... ......
T Consensus 43 ~~l~~aL~~~~~~v~~------~~~~~~~~----~fp----~~~~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~~ 108 (256)
T 2gk3_A 43 TWLLECLRKGGVDIDY------MPAHTVQI----AFP----ESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNAL 108 (256)
T ss_dssp HHHHHHHHHTTCEEEE------ECHHHHHH----CCC----CSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHH
T ss_pred HHHHHHHHhcCceEEE------Eecccchh----hCC----cChhHHhcCCEEEEeCCchhhcccccccccccccChHHH
Confidence 4688899988766654 32210000 001 012568899999999843211 114567
Q ss_pred HHHHHHHHcCCcEEEe
Q 012331 382 LAAKYAREHRIPYLGI 397 (466)
Q Consensus 382 ~aIk~are~~iPvLGI 397 (466)
++++...+++..+++|
T Consensus 109 ~~l~~~V~~GGgll~i 124 (256)
T 2gk3_A 109 ESIKEYVKNGGGLLMI 124 (256)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhCCEEEEE
Confidence 8888888889999999
No 208
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=42.95 E-value=16 Score=35.48 Aligned_cols=61 Identities=28% Similarity=0.445 Sum_probs=43.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC-eeEEee--eccccc-CCCCCCCccccceEEEccCCccccCCC
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL-RVTCIK--IDPYLN-TDAGTMSPFEHGEVFVLDDGGEVDLDL 71 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~-~v~~~K--~DpYln-~d~gtmsp~~hgEvfv~~dg~e~dlDl 71 (466)
++|+.|.| |+.|+....+|+..|| +|..++ +.-|.. +++. .+.-.|++||-|+=--++-+|
T Consensus 183 ~IVvyC~~-------G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~~~--~~~w~G~~fVFD~R~~~~~~l 247 (265)
T 4f67_A 183 KIAMFCTG-------GIRCEKTTAYMKELGFEHVYQLHDGILNYLESIPES--ESLWEGKCFVFDDRVAVDQKL 247 (265)
T ss_dssp CEEEECSS-------SHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSCTT--TCCEEECEECSSTTCEECTTS
T ss_pred eEEEEeCC-------ChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcCcc--cccccCcceeEcCccccccCH
Confidence 45666653 6778888999999999 588765 444543 2332 345679999999987777766
No 209
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=42.80 E-value=1.1e+02 Score=29.88 Aligned_cols=40 Identities=38% Similarity=0.532 Sum_probs=34.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYl 43 (466)
+.|.++| -.|.||=.....|...+...|.+|.++-.||.-
T Consensus 57 ~~i~i~G--~~g~GKSTl~~~l~~~~~~~~~~v~v~~~d~~~ 96 (341)
T 2p67_A 57 LRLGVTG--TPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSS 96 (341)
T ss_dssp EEEEEEE--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-
T ss_pred EEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEeecCCc
Confidence 4567777 899999999999999999999999999888864
No 210
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=42.49 E-value=17 Score=33.03 Aligned_cols=31 Identities=32% Similarity=0.473 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- ++||+.+ .+.|.++|++|.+.-
T Consensus 3 k~vlItGas-ggiG~~~-----a~~l~~~G~~V~~~~ 33 (250)
T 2cfc_A 3 RVAIVTGAS-SGNGLAI-----ATRFLARGDRVAALD 33 (250)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 456677899887764
No 211
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=42.48 E-value=19 Score=32.83 Aligned_cols=34 Identities=32% Similarity=0.454 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|-++||||- +|||+ .+.+.|.++|++|.+.-.++
T Consensus 4 k~vlITGas-~gIG~-----~~a~~l~~~G~~V~~~~r~~ 37 (236)
T 1ooe_A 4 GKVIVYGGK-GALGS-----AILEFFKKNGYTVLNIDLSA 37 (236)
T ss_dssp EEEEEETTT-SHHHH-----HHHHHHHHTTEEEEEEESSC
T ss_pred CEEEEECCC-cHHHH-----HHHHHHHHCCCEEEEEecCc
Confidence 789999984 66665 45567778899998875443
No 212
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=42.23 E-value=16 Score=33.98 Aligned_cols=32 Identities=28% Similarity=0.301 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- ||||+. +.+.|-++|++|.+.-.
T Consensus 9 k~~lVTGas-~gIG~a-----~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIGGT-HGMGLA-----TVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777764 55677788999887543
No 213
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=42.22 E-value=26 Score=31.55 Aligned_cols=34 Identities=32% Similarity=0.491 Sum_probs=24.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
||-|+||||- ++||+-+ .+.|.++|++|.+.-.+
T Consensus 1 Mk~vlVtGas-g~iG~~l-----~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITGSA-SGIGAAL-----KELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CcEEEEeCCC-cHHHHHH-----HHHHHhCCCEEEEEeCC
Confidence 6889999985 6666654 45566789999887543
No 214
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=42.22 E-value=26 Score=33.08 Aligned_cols=35 Identities=23% Similarity=0.457 Sum_probs=30.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCe-eEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLR-VTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~-v~~~K 38 (466)
++|++.|. +|-||+..+.-|...|+.+|++ |...+
T Consensus 28 ~~i~~eG~--~GsGKsT~~~~l~~~l~~~~~~~~~~~r 63 (236)
T 3lv8_A 28 KFIVIEGL--EGAGKSTAIQVVVETLQQNGIDHITRTR 63 (236)
T ss_dssp CEEEEEES--TTSCHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCCCeeeeec
Confidence 58999985 7899999999999999999999 54443
No 215
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=42.11 E-value=17 Score=33.76 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 38 (263)
T 3ai3_A 8 KVAVITGSS-SGIGLAI-----AEGFAKEGAHIVLVA 38 (263)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEEc
Confidence 679999985 7777654 456777899887753
No 216
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=42.03 E-value=18 Score=34.46 Aligned_cols=33 Identities=39% Similarity=0.678 Sum_probs=26.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|-++||||- ||||+. +.+.|-+.|.+|.+.-.|
T Consensus 12 K~alVTGas-~GIG~a-----ia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 12 QQVLVTGGS-SGIGAA-----IAMQFAELGAEVVALGLD 44 (242)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 779999985 788865 567888999999886543
No 217
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=41.93 E-value=19 Score=33.26 Aligned_cols=32 Identities=22% Similarity=0.548 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 39 (249)
T 2ew8_A 8 KLAVITGGA-NGIGRAI-----AERFAVEGADIAIADL 39 (249)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEcC
Confidence 689999984 6777654 4567778999877543
No 218
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=41.80 E-value=18 Score=33.85 Aligned_cols=31 Identities=35% Similarity=0.418 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 6 k~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 6 KVWLVTGAS-SGFGRAI-----AEAAVAAGDTVIGTA 36 (281)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 456777899987653
No 219
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=41.79 E-value=1e+02 Score=28.08 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=21.5
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.++||||+.+... ......++.+.+.++|+.-+
T Consensus 68 ~~vdgiii~~~~~----~~~~~~~~~~~~~~iPvV~~ 100 (304)
T 3gbv_A 68 EQPDGVMFAPTVP----QYTKGFTDALNELGIPYIYI 100 (304)
T ss_dssp TCCSEEEECCSSG----GGTHHHHHHHHHHTCCEEEE
T ss_pred cCCCEEEECCCCh----HHHHHHHHHHHHCCCeEEEE
Confidence 4799999987421 12234566677778998655
No 220
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=41.77 E-value=16 Score=33.89 Aligned_cols=31 Identities=35% Similarity=0.685 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 3 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 33 (258)
T 3a28_C 3 KVAMVTGGA-QGIGRGI-----SEKLAADGFDIAVAD 33 (258)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHHTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777754 455666799887753
No 221
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=41.69 E-value=2e+02 Score=26.02 Aligned_cols=82 Identities=12% Similarity=0.045 Sum_probs=44.8
Q ss_pred CCeEEEEEeccCCchhhH-----HHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEe
Q 012331 296 EPVRIAMVGKYTGLSDAY-----LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILV 368 (466)
Q Consensus 296 ~~v~IaIVgkY~g~~Day-----~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIll 368 (466)
+..+||++-.. ..+.| ..+.++++..|+.+.+ .++.. +++......+.+ .++|||++
T Consensus 4 ~~~~Ig~i~~~--~~~~~~~~~~~gi~~~a~~~g~~~~~------~~~~~--------~~~~~~~~~~~l~~~~vdgiIi 67 (291)
T 3l49_A 4 EGKTIGITAIG--TDHDWDLKAYQAQIAEIERLGGTAIA------LDAGR--------NDQTQVSQIQTLIAQKPDAIIE 67 (291)
T ss_dssp TTCEEEEEESC--CSSHHHHHHHHHHHHHHHHTTCEEEE------EECTT--------CHHHHHHHHHHHHHHCCSEEEE
T ss_pred CCcEEEEEeCC--CCChHHHHHHHHHHHHHHHcCCEEEE------EcCCC--------CHHHHHHHHHHHHHcCCCEEEE
Confidence 34589988642 22333 3456667777766554 33321 111111122222 47999998
Q ss_pred cCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 369 PGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 369 PGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.+... ......++.+.+.++|+.-+
T Consensus 68 ~~~~~----~~~~~~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 68 QLGNL----DVLNPWLQKINDAGIPLFTV 92 (291)
T ss_dssp ESSCH----HHHHHHHHHHHHTTCCEEEE
T ss_pred eCCCh----hhhHHHHHHHHHCCCcEEEe
Confidence 76421 22345677778889998765
No 222
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=41.69 E-value=16 Score=34.53 Aligned_cols=33 Identities=27% Similarity=0.488 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|.++||||- ||||+.+ .+.|-.+|++|.+.-.+
T Consensus 5 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 5 KVILITGAS-GGIGEGI-----ARELGVAGAKILLGARR 37 (264)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCc-cHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 789999986 7888754 45677889998776443
No 223
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=41.61 E-value=16 Score=34.14 Aligned_cols=29 Identities=41% Similarity=0.595 Sum_probs=21.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
|.++||||- ||||+ ++.+.|-.+|++|.+
T Consensus 27 k~vlITGas-~gIG~-----a~a~~l~~~G~~V~~ 55 (272)
T 4e3z_A 27 PVVLVTGGS-RGIGA-----AVCRLAARQGWRVGV 55 (272)
T ss_dssp CEEEETTTT-SHHHH-----HHHHHHHHTTCEEEE
T ss_pred CEEEEECCC-chHHH-----HHHHHHHHCCCEEEE
Confidence 689999984 77776 455667788998754
No 224
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=41.61 E-value=16 Score=33.75 Aligned_cols=31 Identities=42% Similarity=0.577 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+. +.+.|-++|++|.+.-
T Consensus 10 k~~lVTGas-~gIG~a-----~a~~l~~~G~~V~~~~ 40 (248)
T 3op4_A 10 KVALVTGAS-RGIGKA-----IAELLAERGAKVIGTA 40 (248)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4456778899987653
No 225
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=41.59 E-value=16 Score=34.07 Aligned_cols=29 Identities=34% Similarity=0.568 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
|.++||||- ||||+.+ .+.|-++|++|.+
T Consensus 5 k~vlVTGas-~gIG~ai-----a~~l~~~G~~vv~ 33 (258)
T 3oid_A 5 KCALVTGSS-RGVGKAA-----AIRLAENGYNIVI 33 (258)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEecCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7777754 5667788998865
No 226
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=41.58 E-value=15 Score=34.12 Aligned_cols=29 Identities=38% Similarity=0.622 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
|.++||||- +|||+. +.+.|-++|++|.+
T Consensus 27 k~vlVTGas-~gIG~~-----la~~l~~~G~~v~i 55 (267)
T 4iiu_A 27 RSVLVTGAS-KGIGRA-----IARQLAADGFNIGV 55 (267)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEE
Confidence 679999985 777764 55667788998755
No 227
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=41.51 E-value=19 Score=32.92 Aligned_cols=34 Identities=29% Similarity=0.296 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEEeeec
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTCIKID 40 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~-~g~~v~~~K~D 40 (466)
.|.|+||||- ++||+.+ .+.|-. +|++|.+.=.+
T Consensus 4 ~k~vlITGas-ggIG~~~-----a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAI-----VRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEESSCS-SHHHHHH-----HHHHHHHSSSEEEEEESS
T ss_pred CCEEEEeCCC-cHHHHHH-----HHHHHHhcCCeEEEEeCC
Confidence 3789999985 6777654 344555 89988776444
No 228
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=41.39 E-value=52 Score=29.08 Aligned_cols=47 Identities=28% Similarity=0.444 Sum_probs=33.5
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 012331 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (466)
Q Consensus 111 vqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGt-vGdiEs~pf~ea~rq~ 166 (466)
..+||.=-++|++.|++... ..++|++|+ .||| +|+-.=.| ||++++
T Consensus 49 ~~iv~Dd~~~i~~~l~~~~~------~~~~DlVit-tGG~g~g~~D~t~--~a~~~~ 96 (167)
T 1uuy_A 49 TAVVPDEVERIKDILQKWSD------VDEMDLILT-LGGTGFTPRDVTP--EATKKV 96 (167)
T ss_dssp EEEECSCHHHHHHHHHHHHH------TSCCSEEEE-ESCCSSSTTCCHH--HHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHh------cCCCCEEEE-CCCCCCCCCCchH--HHHHHH
Confidence 45788888899999998862 236898766 6777 66543344 888876
No 229
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=41.37 E-value=15 Score=34.08 Aligned_cols=30 Identities=37% Similarity=0.523 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- ||||+. +.+.|-++|++|.+.
T Consensus 10 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~ 39 (257)
T 3tl3_A 10 AVAVVTGGA-SGLGLA-----TTKRLLDAGAQVVVL 39 (257)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHHTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999986 777765 455677789998774
No 230
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=41.28 E-value=17 Score=34.10 Aligned_cols=31 Identities=39% Similarity=0.576 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 22 k~~lVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 52 (267)
T 1vl8_A 22 RVALVTGGS-RGLGFGI-----AQGLAEAGCSVVVAS 52 (267)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 456677899987753
No 231
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=41.25 E-value=17 Score=33.59 Aligned_cols=31 Identities=26% Similarity=0.498 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-++||||- +|||+. +.+.|-++|++|.+.=
T Consensus 13 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 43 (252)
T 3f1l_A 13 RIILVTGAS-DGIGRE-----AAMTYARYGATVILLG 43 (252)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEEe
Confidence 689999985 777765 4456778899987753
No 232
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=41.22 E-value=21 Score=32.85 Aligned_cols=31 Identities=23% Similarity=0.318 Sum_probs=23.9
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.|+||||-- +|||+.+ .+.|-++|++|.+.
T Consensus 15 k~vlITGa~~~~giG~~i-----a~~l~~~G~~V~~~ 46 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGI-----AKACKREGAELAFT 46 (271)
T ss_dssp CEEEECCCCSTTSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCCCCCcHHHHH-----HHHHHHcCCCEEEE
Confidence 7899999953 7899865 45667789988765
No 233
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=41.04 E-value=16 Score=34.06 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+.++ +.|.++|++|.+.
T Consensus 12 k~~lVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 41 (276)
T 1mxh_A 12 PAAVITGGA-RRIGHSIA-----VRLHQQGFRVVVH 41 (276)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 679999986 77777554 5566789988764
No 234
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=40.95 E-value=17 Score=34.17 Aligned_cols=32 Identities=38% Similarity=0.459 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+.+ .+.|..+|++|.+.-.
T Consensus 23 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGAT-SGIGLEI-----ARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 7777754 4567778999877643
No 235
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=40.94 E-value=19 Score=33.64 Aligned_cols=32 Identities=34% Similarity=0.503 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 31 k~vlVTGas-~GIG~a-----ia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 31 ASAIVSGGA-GGLGEA-----TVRRLHADGLGVVIADL 62 (281)
T ss_dssp EEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777765 45666778999887633
No 236
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=40.89 E-value=20 Score=34.67 Aligned_cols=32 Identities=34% Similarity=0.532 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- ||||+.+ .+.|-++|++|.+.=.
T Consensus 9 k~vlVTGas-~gIG~~l-----a~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 9 RTAFVTGGA-NGVGIGL-----VRQLLNQGCKVAIADI 40 (319)
T ss_dssp CEEEEETTT-STHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEcCCc-hHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 689999997 8888754 4566678999877543
No 237
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=40.81 E-value=1e+02 Score=29.64 Aligned_cols=81 Identities=15% Similarity=0.037 Sum_probs=52.2
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCCc
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg~ 377 (466)
.+|.+|+.- ...+.-..+.++|+..|+++.+ ++.+++-. ++ +.|.++|.||++.-....-.
T Consensus 5 ~~vLiV~g~-~~~~~a~~l~~aL~~~g~~V~~------i~~~~~~~-----~~-------~~L~~yDvIIl~d~~~~~l~ 65 (259)
T 3rht_A 5 TRVLYCGDT-SLETAAGYLAGLMTSWQWEFDY------IPSHVGLD-----VG-------ELLAKQDLVILSDYPAERMT 65 (259)
T ss_dssp -CEEEEESS-CTTTTHHHHHHHHHHTTCCCEE------ECTTSCBC-----SS-------HHHHTCSEEEEESCCGGGBC
T ss_pred ceEEEECCC-CchhHHHHHHHHHHhCCceEEE------eccccccc-----Ch-------hHHhcCCEEEEcCCccccCC
Confidence 367777621 2233556788999999999876 55554421 11 57899999999863222222
Q ss_pred hhHHHHHHHHHHcCCcEEEe
Q 012331 378 QGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 378 eG~i~aIk~are~~iPvLGI 397 (466)
....++++.+.+++-=++.+
T Consensus 66 ~~~~~~L~~yV~~GGgLi~~ 85 (259)
T 3rht_A 66 AQAIDQLVTMVKAGCGLVML 85 (259)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCeEEEe
Confidence 45677787777777666666
No 238
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=40.77 E-value=28 Score=31.67 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=26.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH--CCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA--CGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~--~g~~v~~~K 38 (466)
|.+|+||- -|+|-|.+.++++.+. +|++|-++|
T Consensus 9 ~i~v~~G~----mgsGKTT~ll~~a~r~~~~g~kV~v~k 43 (191)
T 1xx6_A 9 WVEVIVGP----MYSGKSEELIRRIRRAKIAKQKIQVFK 43 (191)
T ss_dssp EEEEEECS----TTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECC----CCCcHHHHHHHHHHHHHHCCCEEEEEE
Confidence 56777774 3667788888887665 999999998
No 239
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=40.75 E-value=16 Score=34.04 Aligned_cols=32 Identities=31% Similarity=0.654 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.=.
T Consensus 11 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 11 RSVVVTGGT-KGIGRGI-----ATVFARAGANVAVAGR 42 (262)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7777754 5567788998877643
No 240
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=40.73 E-value=20 Score=33.67 Aligned_cols=32 Identities=28% Similarity=0.509 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 12 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 43 (271)
T 3tzq_B 12 KVAIITGAC-GGIGLE-----TSRVLARAGARVVLADL 43 (271)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEcC
Confidence 789999985 777764 45667788999887643
No 241
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=40.65 E-value=18 Score=33.17 Aligned_cols=31 Identities=29% Similarity=0.375 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+ ++.+.|-++|++|.+.-
T Consensus 10 k~vlITGas-~giG~-----~~a~~l~~~G~~V~~~~ 40 (253)
T 3qiv_A 10 KVGIVTGSG-GGIGQ-----AYAEALAREGAAVVVAD 40 (253)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHH-----HHHHHHHHCCCEEEEEc
Confidence 789999984 77776 45567778899988753
No 242
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=40.62 E-value=18 Score=33.71 Aligned_cols=31 Identities=42% Similarity=0.703 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.++ +.|.++|++|.+.-
T Consensus 14 k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~~ 44 (267)
T 1iy8_A 14 RVVLITGGG-SGLGRATA-----VRLAAEGAKLSLVD 44 (267)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEe
Confidence 679999984 88887654 55667899887753
No 243
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=40.60 E-value=18 Score=34.17 Aligned_cols=30 Identities=30% Similarity=0.442 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+.+ .+.|-.+|++|.+.
T Consensus 34 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 63 (275)
T 4imr_A 34 RTALVTGSS-RGIGAAI-----AEGLAGAGAHVILH 63 (275)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 7787654 45677789998875
No 244
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=40.57 E-value=37 Score=33.48 Aligned_cols=41 Identities=32% Similarity=0.509 Sum_probs=33.0
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 012331 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (466)
Q Consensus 3 ~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~ 45 (466)
.|.+||- .|.||=..+..++..|...|++|.++-.||.-..
T Consensus 81 ~I~i~G~--~G~GKSTl~~~L~~~l~~~g~kV~vi~~Dp~~~~ 121 (355)
T 3p32_A 81 RVGITGV--PGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTR 121 (355)
T ss_dssp EEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEEEC-----
T ss_pred EEEEECC--CCCCHHHHHHHHHHHHHhCCCceEEEecCCCCCc
Confidence 5777874 9999999999999999999999999999987664
No 245
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=40.46 E-value=17 Score=33.43 Aligned_cols=30 Identities=33% Similarity=0.523 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 5 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~ 34 (246)
T 2uvd_A 5 KVALVTGAS-RGIGRAI-----AIDLAKQGANVVVN 34 (246)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 7888765 45667789988664
No 246
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=40.41 E-value=20 Score=32.82 Aligned_cols=32 Identities=28% Similarity=0.440 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- ++||+.+ .+.|.++|++|.+.-.
T Consensus 13 k~vlVTGas-ggiG~~~-----a~~l~~~G~~V~~~~r 44 (265)
T 2o23_A 13 LVAVITGGA-SGLGLAT-----AERLVGQGASAVLLDL 44 (265)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999994 7777654 4567778999887643
No 247
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=40.34 E-value=29 Score=32.03 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=28.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC-eeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL-RVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~-~v~~ 36 (466)
+||.+.|. +|-||+..+..|...|+.+|+ .|..
T Consensus 4 ~~i~~eG~--~gsGKsT~~~~l~~~l~~~~~~~v~~ 37 (213)
T 4tmk_A 4 KYIVIEGL--EGAGKTTARNVVVETLEQLGIRDMVF 37 (213)
T ss_dssp CEEEEEEC--TTSCHHHHHHHHHHHHHHTTCCCEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCCccee
Confidence 68999985 799999999999999999998 5543
No 248
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=40.26 E-value=18 Score=32.89 Aligned_cols=31 Identities=35% Similarity=0.433 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- ++||+. +.+.|.++|++|.+.=
T Consensus 12 k~vlITGas-ggiG~~-----la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 12 ACAAVTGAG-SGIGLE-----ICRAFAASGARLILID 42 (254)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999985 677764 4556777899888763
No 249
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=40.25 E-value=23 Score=33.42 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|.++||||- +|||+.++ +.|-++|++|.+.=.+
T Consensus 22 k~vlVTGas-~gIG~aia-----~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGAT-SGFGEACA-----RRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTT-TSSHHHHH-----HHHHHTTCEEEEEESC
T ss_pred cEEEEeCCC-CHHHHHHH-----HHHHHCCCEEEEEECC
Confidence 679999984 89998654 5567789998876443
No 250
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=40.22 E-value=18 Score=33.92 Aligned_cols=32 Identities=25% Similarity=0.504 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- ||||+.+ .+.|-++|++|.+.-.
T Consensus 12 k~~lVTGas-~GIG~a~-----a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFITGAA-RGQGRAH-----AVRMAAEGADIIAVDI 43 (277)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCc-cHHHHHH-----HHHHHHcCCEEEEEec
Confidence 789999985 7777654 5567788999987643
No 251
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=40.22 E-value=18 Score=33.95 Aligned_cols=33 Identities=30% Similarity=0.499 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|.++||||- +|||+. +.+.|-++|++|.+.-.+
T Consensus 11 k~~lVTGas-~gIG~a-----~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGA-RGMGRS-----HAVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCeEEEEeCC
Confidence 789999986 777765 456677889999876544
No 252
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=40.17 E-value=19 Score=33.43 Aligned_cols=32 Identities=34% Similarity=0.406 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++|||| -+|||+.+ .+.|.++|++|.+.-.
T Consensus 10 k~vlVTGa-s~giG~~i-----a~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 10 CTALVTGG-SRGIGYGI-----VEELASLGASVYTCSR 41 (260)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CcHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 67999998 47777654 4566678998877643
No 253
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=40.09 E-value=18 Score=33.70 Aligned_cols=31 Identities=29% Similarity=0.465 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|-.+|++|.+.=
T Consensus 30 k~vlITGas-~gIG~~l-----a~~l~~~G~~V~~~~ 60 (262)
T 3rkr_A 30 QVAVVTGAS-RGIGAAI-----ARKLGSLGARVVLTA 60 (262)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEE
Confidence 689999985 7888765 456667899887653
No 254
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=40.07 E-value=19 Score=32.99 Aligned_cols=30 Identities=37% Similarity=0.589 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.|+||||- ++||+. +.+.|.++|++|.+.
T Consensus 15 k~vlITGas-ggiG~~-----~a~~l~~~G~~V~~~ 44 (265)
T 1h5q_A 15 KTIIVTGGN-RGIGLA-----FTRAVAAAGANVAVI 44 (265)
T ss_dssp EEEEEETTT-SHHHHH-----HHHHHHHTTEEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCeEEEE
Confidence 789999984 777764 445666789887765
No 255
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=40.04 E-value=19 Score=34.10 Aligned_cols=33 Identities=33% Similarity=0.355 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|-++||||- +|||+. +.+.|-++|++|.+.=.+
T Consensus 17 k~vlVTGas-~gIG~~-----~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 17 RTVVITGAN-SGLGAV-----TARELARRGATVIMAVRD 49 (291)
T ss_dssp CEEEEECCS-SHHHHH-----HHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEEECC
Confidence 679999987 777764 446677889998876443
No 256
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=39.91 E-value=23 Score=32.80 Aligned_cols=33 Identities=27% Similarity=0.237 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||-=||||+. +.+.|-.+|++|.+.-.
T Consensus 23 k~vlITGasg~GIG~~-----~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 23 KVVLVTAAAGTGIGST-----TARRALLEGADVVISDY 55 (266)
T ss_dssp CEEEESSCSSSSHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCchHHH-----HHHHHHHCCCEEEEecC
Confidence 6899999976788875 45667778999887644
No 257
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=39.90 E-value=18 Score=33.98 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=25.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|.++||||- ||||+. +.+.|-.+|++|.+.-.+
T Consensus 12 k~~lVTGas-~gIG~a-----ia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 12 KVAFVTGAA-RGQGRS-----HAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCeEEEEecc
Confidence 789999996 677764 556777889999887544
No 258
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=39.83 E-value=18 Score=34.18 Aligned_cols=31 Identities=32% Similarity=0.535 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+. +.+.|-++|++|.+.-
T Consensus 28 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~ 58 (277)
T 4dqx_A 28 RVCIVTGGG-SGIGRA-----TAELFAKNGAYVVVAD 58 (277)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4566778899988753
No 259
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=39.81 E-value=17 Score=34.56 Aligned_cols=31 Identities=32% Similarity=0.353 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.=
T Consensus 10 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGAA-KRLGRSI-----AEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCeEEEEc
Confidence 789999985 7888754 456777899988763
No 260
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=39.80 E-value=17 Score=33.89 Aligned_cols=32 Identities=31% Similarity=0.536 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.=.
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSS-NGIGRAT-----AVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999985 7777754 4566778999887643
No 261
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=39.73 E-value=18 Score=32.79 Aligned_cols=29 Identities=38% Similarity=0.599 Sum_probs=21.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
|.|+||||- ++||+. +.+.|.++|++|.+
T Consensus 2 k~vlVTGas-ggiG~~-----la~~l~~~G~~v~~ 30 (244)
T 1edo_A 2 PVVVVTGAS-RGIGKA-----IALSLGKAGCKVLV 30 (244)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCEEEE
Confidence 679999985 677764 45567778998876
No 262
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=39.59 E-value=21 Score=33.81 Aligned_cols=30 Identities=30% Similarity=0.570 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+. +.+.|-++|++|.+.
T Consensus 33 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~ 62 (276)
T 3r1i_A 33 KRALITGAS-TGIGKK-----VALAYAEAGAQVAVA 62 (276)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 689999996 778765 456677889998775
No 263
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=39.53 E-value=19 Score=33.68 Aligned_cols=32 Identities=28% Similarity=0.505 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 14 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 45 (278)
T 3sx2_A 14 KVAFITGAA-RGQGRA-----HAVRLAADGADIIAVDL 45 (278)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCeEEEEec
Confidence 789999985 777765 45667788999987643
No 264
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=39.52 E-value=19 Score=34.44 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=25.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|.++||||- ||||+. +.+.|-++|++|.+.-.++
T Consensus 29 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~~~~~ 62 (299)
T 3t7c_A 29 KVAFITGAA-RGQGRS-----HAITLAREGADIIAIDVCK 62 (299)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEECCS
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeccc
Confidence 789999985 777764 4566778899998865443
No 265
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=39.40 E-value=19 Score=34.53 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- ||||+. +.+.|-++|++|.+.
T Consensus 32 k~vlVTGas-~gIG~~-----la~~l~~~G~~V~~~ 61 (301)
T 3tjr_A 32 RAAVVTGGA-SGIGLA-----TATEFARRGARLVLS 61 (301)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999987 778775 456677889988775
No 266
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=39.39 E-value=1.5e+02 Score=27.39 Aligned_cols=82 Identities=16% Similarity=0.068 Sum_probs=43.7
Q ss_pred eEEEEEeccCC---chhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEecCCC
Q 012331 298 VRIAMVGKYTG---LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (466)
Q Consensus 298 v~IaIVgkY~g---~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllPGGf 372 (466)
.+||++-.... +......+.++++..|+.+.+ ..+.. +++.-....+.+ .++|||++.+..
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~------~~~~~--------~~~~~~~~i~~l~~~~vdgiIi~~~~ 68 (313)
T 3m9w_A 3 VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV------QSANG--------NEETQMSQIENMINRGVDVLVIIPYN 68 (313)
T ss_dssp CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEE------EECTT--------CHHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEE------ECCCC--------CHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 47888754311 122344566777777776654 23321 111111122222 479999998743
Q ss_pred CCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 373 G~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.+ . ....++.+.+.++|+.-+
T Consensus 69 ~~-~---~~~~~~~~~~~~iPvV~~ 89 (313)
T 3m9w_A 69 GQ-V---LSNVVKEAKQEGIKVLAY 89 (313)
T ss_dssp TT-S---CHHHHHHHHTTTCEEEEE
T ss_pred hh-h---hHHHHHHHHHCCCeEEEE
Confidence 22 1 234566777788998654
No 267
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=39.32 E-value=18 Score=33.44 Aligned_cols=31 Identities=29% Similarity=0.520 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 6 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 36 (260)
T 2qq5_A 6 QVCVVTGAS-RGIGRGI-----ALQLCKAGATVYITG 36 (260)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999984 7777654 456777899887753
No 268
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=39.29 E-value=21 Score=33.43 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|-++||||- +|||+. +.+.|-++|++|.+.-.+
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 29 KVVVITGAS-QGIGAG-----LVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999985 777764 445677889999886543
No 269
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=39.24 E-value=16 Score=34.22 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|.++||||- +|||+. +.+.|-++|++|.+.-.+
T Consensus 28 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGAS-QRVGLH-----CALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTT-SHHHHH-----HHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999985 777764 455677789998876443
No 270
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=39.17 E-value=18 Score=33.02 Aligned_cols=29 Identities=34% Similarity=0.496 Sum_probs=21.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
|.++||||- ||||+.+ .+.|-++|++|.+
T Consensus 8 k~vlITGas-~gIG~~~-----a~~l~~~G~~v~~ 36 (255)
T 3icc_A 8 KVALVTGAS-RGIGRAI-----AKRLANDGALVAI 36 (255)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCeEEE
Confidence 789999996 7777654 4556678988765
No 271
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=38.89 E-value=1.1e+02 Score=28.65 Aligned_cols=77 Identities=17% Similarity=0.139 Sum_probs=49.8
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCCc
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg~ 377 (466)
-+|.+|+.- ..+...|.++-+..|+.... =+|++- .++.... .....||.||+-. +
T Consensus 69 ~~iLfVgTk---~~~~~~V~~~A~~~g~~~v~---~rwlgG-~LTN~~~-----------~~f~~PdlliV~D-p----- 124 (208)
T 1vi6_A 69 SKILLVAAR---QYAHKPVQMFSKVVGSDYIV---GRFIPG-TLTNPML-----------SEYREPEVVFVND-P----- 124 (208)
T ss_dssp GGEEEEECS---GGGHHHHHHHHHHHCCEEEE---SSCCTT-TTTCTTS-----------TTCCCCSEEEESC-T-----
T ss_pred CEEEEEeCC---HHHHHHHHHHHHHhCCeeec---CEECCC-cccChhh-----------HhhCCCCEEEEEC-C-----
Confidence 468888832 12556677777777776543 357654 2332211 2345799999885 2
Q ss_pred hhHHHHHHHHHHcCCcEEEeh
Q 012331 378 QGKILAAKYAREHRIPYLGIC 398 (466)
Q Consensus 378 eG~i~aIk~are~~iPvLGIC 398 (466)
.....++++|...++|+.|+|
T Consensus 125 ~~e~~ai~EA~~l~IPvIalv 145 (208)
T 1vi6_A 125 AIDKQAVSEATAVGIPVVALC 145 (208)
T ss_dssp TTTHHHHHHHHHTTCCEEEEE
T ss_pred CcchhHHHHHHHhCCCEEEEe
Confidence 123568899999999999999
No 272
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=38.85 E-value=20 Score=33.11 Aligned_cols=30 Identities=40% Similarity=0.598 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+. +.+.|.++|++|.+.
T Consensus 5 k~vlVTGas-~giG~~-----ia~~l~~~G~~V~~~ 34 (255)
T 2q2v_A 5 KTALVTGST-SGIGLG-----IAQVLARAGANIVLN 34 (255)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 777765 445677789988764
No 273
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=38.83 E-value=19 Score=33.90 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 32 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 61 (271)
T 3v2g_A 32 KTAFVTGGS-RGIGAAI-----AKRLALEGAAVALT 61 (271)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999985 7777654 45677789988654
No 274
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=38.78 E-value=20 Score=33.15 Aligned_cols=34 Identities=32% Similarity=0.391 Sum_probs=25.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.-.++
T Consensus 20 k~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 20 KGVLVLAAS-RGIGRAV-----ADVLSQEGAEVTICARNE 53 (249)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEcCCH
Confidence 679999985 7777654 456677899998875554
No 275
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=38.69 E-value=20 Score=33.21 Aligned_cols=31 Identities=32% Similarity=0.555 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 13 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 43 (263)
T 3ak4_A 13 RKAIVTGGS-KGIGAA-----IARALDKAGATVAIAD 43 (263)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999984 677765 4456777899988753
No 276
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=38.67 E-value=20 Score=33.12 Aligned_cols=31 Identities=39% Similarity=0.530 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 3 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 33 (256)
T 1geg_A 3 KVALVTGAG-QGIGKA-----IALRLVKDGFAVAIAD 33 (256)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4566777899887753
No 277
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=38.16 E-value=21 Score=33.12 Aligned_cols=31 Identities=35% Similarity=0.461 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-++||||- +|||+. +.+.|.++|++|.+.=
T Consensus 8 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 38 (260)
T 2z1n_A 8 KLAVVTAGS-SGLGFA-----SALELARNGARLLLFS 38 (260)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999985 777764 4456677899887753
No 278
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=37.93 E-value=21 Score=33.55 Aligned_cols=32 Identities=41% Similarity=0.547 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 10 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 10 KVVVVTGGG-RGIGAG-----IVRAFVNSGARVVICDK 41 (270)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 679999985 677765 44567788999887643
No 279
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=37.88 E-value=2e+02 Score=26.41 Aligned_cols=83 Identities=14% Similarity=0.068 Sum_probs=43.9
Q ss_pred CeEEEEEeccCCchhhH-----HHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEec
Q 012331 297 PVRIAMVGKYTGLSDAY-----LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 369 (466)
Q Consensus 297 ~v~IaIVgkY~g~~Day-----~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllP 369 (466)
+.+||++-.. ..+.| ..+.++++..|+.+.+ ..++.. .+++......+.+ .++|||++.
T Consensus 3 ~~~Igvi~~~--~~~~~~~~~~~gi~~~a~~~g~~~~~------~~~~~~------~~~~~~~~~i~~l~~~~vdgiii~ 68 (297)
T 3rot_A 3 RDKYYLITHG--SQDPYWTSLFQGAKKAAEELKVDLQI------LAPPGA------NDVPKQVQFIESALATYPSGIATT 68 (297)
T ss_dssp CCEEEEECSC--CCSHHHHHHHHHHHHHHHHHTCEEEE------ECCSSS------CCHHHHHHHHHHHHHTCCSEEEEC
T ss_pred eEEEEEEecC--CCCchHHHHHHHHHHHHHHhCcEEEE------ECCCCc------CCHHHHHHHHHHHHHcCCCEEEEe
Confidence 4689998643 22333 3355666666766543 333211 0111111222222 479999997
Q ss_pred CCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 370 GGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 370 GGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
+...+ .....++.+.+.++|+.-+
T Consensus 69 ~~~~~----~~~~~~~~~~~~giPvV~~ 92 (297)
T 3rot_A 69 IPSDT----AFSKSLQRANKLNIPVIAV 92 (297)
T ss_dssp CCCSS----TTHHHHHHHHHHTCCEEEE
T ss_pred CCCHH----HHHHHHHHHHHCCCCEEEE
Confidence 63221 1234566777789998654
No 280
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=37.76 E-value=39 Score=31.04 Aligned_cols=71 Identities=15% Similarity=0.163 Sum_probs=48.2
Q ss_pred CCcEEEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCchhhhHHHhhcCCCcccEEEEec
Q 012331 139 PVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (466)
Q Consensus 139 ~~d~~i~EigGtvGdiEs~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs 218 (466)
++|++++|+||. + -+-. |.+.++..+++...++.+|.+-- ++.. ...|.+.-.+++++.++.++-+.++.
T Consensus 138 ~~Dvlil~~g~~-~---h~~~-~~a~~~~~~~~~k~vi~~H~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (220)
T 1vjn_A 138 EIDVLLVPVGGT-Y---TIGP-KEAKEVADLLNAKVIIPMHYKTK-YLKF----NLLPVDDFLKLFDSYERVGNILELFE 207 (220)
T ss_dssp CCSEEEEECCSS-S---SCCH-HHHHHHHHHTTCSEEEEESCCCS-SCCT----TCCCTHHHHTTSSCCEECCSEEEESS
T ss_pred CCCEEEEcCCCc-C---cCCH-HHHHHHHHhcCCCEEEEEecccc-cccC----CchhHHHHHHHHHhcCCCccceEEec
Confidence 589999999875 1 2333 33344455677888999998763 3321 15678888888888888777677665
Q ss_pred C
Q 012331 219 T 219 (466)
Q Consensus 219 ~ 219 (466)
.
T Consensus 208 ~ 208 (220)
T 1vjn_A 208 K 208 (220)
T ss_dssp C
T ss_pred C
Confidence 4
No 281
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=37.71 E-value=23 Score=33.70 Aligned_cols=32 Identities=31% Similarity=0.608 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 48 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~~r 79 (291)
T 3ijr_A 48 KNVLITGGD-SGIGRA-----VSIAFAKEGANIAIAYL 79 (291)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 689999984 777764 45667788999877533
No 282
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=37.70 E-value=25 Score=33.69 Aligned_cols=33 Identities=33% Similarity=0.404 Sum_probs=25.9
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv-~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- -||||+.+ .+.|-++|++|.+.-.
T Consensus 10 k~~lVTGa~~s~GIG~ai-----a~~la~~G~~Vv~~~r 43 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAI-----CKLLRAAGARVLVGTW 43 (319)
T ss_dssp CEEEEECCCCTTSHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCCCCcHHHHH-----HHHHHHCCCEEEEEec
Confidence 679999995 89999865 4567778999987643
No 283
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=37.59 E-value=21 Score=33.05 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-++||||- +|||+. +.+.|-++|++|.+.-
T Consensus 9 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 39 (259)
T 4e6p_A 9 KSALITGSA-RGIGRA-----FAEAYVREGATVAIAD 39 (259)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999985 777765 4566778899988753
No 284
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=37.53 E-value=21 Score=33.71 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 32 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 61 (273)
T 3uf0_A 32 RTAVVTGAG-SGIGRAI-----AHGYARAGAHVLAW 61 (273)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999995 7777654 45677789988654
No 285
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=37.50 E-value=20 Score=33.83 Aligned_cols=30 Identities=27% Similarity=0.463 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- ||||+.+ .+.|-++|++|.+.
T Consensus 29 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 58 (270)
T 3ftp_A 29 QVAIVTGAS-RGIGRAI-----ALELARRGAMVIGT 58 (270)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEE
Confidence 689999985 7777654 46677889988765
No 286
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=37.44 E-value=28 Score=33.11 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=29.8
Q ss_pred cCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 11 VSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 11 ~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
-.|.||=.++.++|..|.++|++|-++-+||-
T Consensus 14 kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q 45 (228)
T 2r8r_A 14 APGVGKTYAMLQAAHAQLRQGVRVMAGVVETH 45 (228)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCCT
T ss_pred CCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 47999999999999999999999999999985
No 287
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=37.40 E-value=20 Score=33.64 Aligned_cols=32 Identities=31% Similarity=0.467 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+-+ .+.|.++|++|.+.-.
T Consensus 29 k~vlITGas-ggIG~~l-----a~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 29 KKVIVTGAS-KGIGREM-----AYHLAKMGAHVVVTAR 60 (286)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 679999985 7777754 4556678998887643
No 288
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=37.34 E-value=29 Score=30.90 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=24.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|| |+||||- +++|+ .+.+.|.++|++|.++-.+|
T Consensus 1 M~-ilItGat-G~iG~-----~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MK-IFIVGST-GRVGK-----SLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CE-EEEESTT-SHHHH-----HHHHHHTTSSCEEEEEESSG
T ss_pred Ce-EEEECCC-CHHHH-----HHHHHHHHCCCEEEEEECCc
Confidence 55 8999975 45554 55567778899999887665
No 289
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=37.31 E-value=21 Score=33.49 Aligned_cols=32 Identities=44% Similarity=0.610 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|-++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 12 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 12 RTYLVTGGG-SGIGKG-----VAAGLVAAGASVMIVGR 43 (281)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 679999984 777764 44667778998877643
No 290
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=37.12 E-value=19 Score=33.92 Aligned_cols=32 Identities=28% Similarity=0.417 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+.++ +.|-++|++|.+.-.
T Consensus 24 k~~lVTGas-~gIG~aia-----~~L~~~G~~V~~~~r 55 (288)
T 2x9g_A 24 PAAVVTGAA-KRIGRAIA-----VKLHQTGYRVVIHYH 55 (288)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHHTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHHH-----HHHHHCCCeEEEEeC
Confidence 679999985 78887654 456677998877543
No 291
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=36.99 E-value=22 Score=33.67 Aligned_cols=33 Identities=27% Similarity=0.470 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|.++||||- ||||+. +.+.|-++|++|.+.=.+
T Consensus 10 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 10 KTMFISGGS-RGIGLA-----IAKRVAADGANVALVAKS 42 (285)
T ss_dssp CEEEEESCS-SHHHHH-----HHHHHHTTTCEEEEEESC
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEECC
Confidence 789999986 778765 456677889988776443
No 292
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=36.77 E-value=22 Score=32.66 Aligned_cols=32 Identities=34% Similarity=0.574 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+.++ +.|.++|++|.+.-.
T Consensus 6 k~vlVTGas-~giG~~ia-----~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 6 KAVLITGAA-HGIGRATL-----ELFAKEGARLVACDI 37 (245)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEeC
Confidence 679999984 77777654 566778999887643
No 293
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=36.77 E-value=21 Score=33.39 Aligned_cols=29 Identities=41% Similarity=0.568 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
|.++||||- +|||+.+ .+.|-++|++|.+
T Consensus 19 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~ 47 (270)
T 3is3_A 19 KVALVTGSG-RGIGAAV-----AVHLGRLGAKVVV 47 (270)
T ss_dssp CEEEESCTT-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 779999985 7777654 5667788998866
No 294
>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.00A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1
Probab=36.75 E-value=38 Score=35.14 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=28.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.|-||| +=||+.|++=|..+|++.|++|-.+.
T Consensus 109 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~g 141 (498)
T 1e8c_A 109 RLVGVTG----TNGKTTTTQLLAQWSQLLGEISAVMG 141 (498)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEeC----CcChHHHHHHHHHHHHhCCCCEEEEC
Confidence 5788888 56999999999999999999987653
No 295
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=36.64 E-value=22 Score=33.05 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|-++||||- ||||+. +.+.|-++|++|.+.
T Consensus 9 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~ 38 (259)
T 3edm_A 9 RTIVVAGAG-RDIGRA-----CAIRFAQEGANVVLT 38 (259)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEE
Confidence 689999985 677764 456677789988654
No 296
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=36.63 E-value=31 Score=32.14 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=24.9
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv-~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-++||||- -+|||+.++ +.|.++|++|.+.=
T Consensus 8 k~vlVTGa~~s~gIG~aia-----~~l~~~G~~V~~~~ 40 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIA-----RVAQEQGAQLVLTG 40 (269)
T ss_dssp CEEEECCCSSTTSHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCchHHHHH-----HHHHHCCCEEEEEe
Confidence 679999994 789998654 56777899887753
No 297
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=36.63 E-value=22 Score=34.05 Aligned_cols=33 Identities=33% Similarity=0.669 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|-++||||- +|||+.+ .+.|-.+|++|.+.-.+
T Consensus 42 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 42 RSVLVTGGT-KGIGRGI-----ATVFARAGANVAVAARS 74 (293)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 679999994 7777754 46677889998876443
No 298
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=36.55 E-value=21 Score=32.81 Aligned_cols=29 Identities=38% Similarity=0.604 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
|-++||||- +|||+. +.+.|-++|++|.+
T Consensus 5 k~~lVTGas-~gIG~~-----ia~~l~~~G~~V~~ 33 (246)
T 3osu_A 5 KSALVTGAS-RGIGRS-----IALQLAEEGYNVAV 33 (246)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEE
Confidence 789999985 777765 45667788998765
No 299
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=36.42 E-value=21 Score=33.89 Aligned_cols=31 Identities=39% Similarity=0.636 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 34 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 64 (281)
T 4dry_A 34 RIALVTGGG-TGVGRGI-----AQALSAEGYSVVITG 64 (281)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEE
Confidence 679999985 7777754 456667899887753
No 300
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=36.40 E-value=22 Score=33.59 Aligned_cols=30 Identities=30% Similarity=0.465 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|-++||||- +|||+. +.+.|-++|++|.+.
T Consensus 26 k~~lVTGas-~GIG~~-----ia~~la~~G~~V~~~ 55 (281)
T 3v2h_A 26 KTAVITGST-SGIGLA-----IARTLAKAGANIVLN 55 (281)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 777764 456677889988763
No 301
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.31 E-value=23 Score=31.88 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g--~~v~~~K~D 40 (466)
|.++||||- ++||+.+ .+.|.++| ++|.+.-.+
T Consensus 4 k~vlItGas-ggiG~~l-----a~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 4 GSVVVTGAN-RGIGLGL-----VQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp SEEEESSCS-SHHHHHH-----HHHHHTCTTCCEEEEEESS
T ss_pred CEEEEecCC-chHHHHH-----HHHHHhcCCCcEEEEEecC
Confidence 689999984 7777654 45666788 888876544
No 302
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=36.26 E-value=21 Score=33.32 Aligned_cols=30 Identities=40% Similarity=0.561 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+. +.+.|-++|++|.+.
T Consensus 30 k~vlITGas-~gIG~~-----la~~l~~~G~~V~~~ 59 (271)
T 4iin_A 30 KNVLITGAS-KGIGAE-----IAKTLASMGLKVWIN 59 (271)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 677764 455666789988764
No 303
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=36.13 E-value=36 Score=29.71 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRV 34 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v 34 (466)
++|+++|. +|-||+..+..|...|...| +|
T Consensus 5 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g-~~ 34 (213)
T 2plr_A 5 VLIAFEGI--DGSGKSSQATLLKDWIELKR-DV 34 (213)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHTTTS-CE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhhcC-CE
Confidence 58999996 78899999999988887666 44
No 304
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=36.05 E-value=22 Score=32.78 Aligned_cols=31 Identities=32% Similarity=0.389 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 15 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 45 (260)
T 2zat_A 15 KVALVTAST-DGIGLA-----IARRLAQDGAHVVVSS 45 (260)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999984 677765 4456777899887753
No 305
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=35.97 E-value=23 Score=33.18 Aligned_cols=61 Identities=21% Similarity=0.166 Sum_probs=38.2
Q ss_pred cCCCEEEecCCCCCC-Cch-hHHHHHHHHHHcCCcEEEehHHHHHHHHHh--ccccccccCCCCcc
Q 012331 361 KGADGILVPGGFGNR-GVQ-GKILAAKYAREHRIPYLGICLGMQVAVIEF--ARSVLNLRDANSTE 422 (466)
Q Consensus 361 ~~~DGIllPGGfG~r-g~e-G~i~aIk~are~~iPvLGICLGmQllaia~--Gr~v~klk~a~s~E 422 (466)
.+.|+|.++-|||.- ++. |..-+--.+...++|+.||+- ++.++... .+.++-+-+|.+.|
T Consensus 65 ~dld~Iav~~GPGsfTGlRiG~~~Ak~La~~~~iPl~gVs~-l~a~a~~~~~~~~v~~~iDARr~e 129 (218)
T 2a6a_A 65 KDLDVVGVGIGPGGLTGLRVGIATVVGLVSPYDIPVAPLNS-FEMTAKSCPADGVVLVARRARKGY 129 (218)
T ss_dssp GGCSEEEEECCSSCHHHHHHHHHHHHHHHGGGTCCEEEECH-HHHHHHTCSSCEEEEEEEECSTTE
T ss_pred HHCCEEEEEcCCCchHhHHHHHHHHHHHHHHcCCCEEEeCc-HHHHHhhcccCCcEEEEEECCCCc
Confidence 457999999999984 443 332222234567899999995 55555432 23455555666665
No 306
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=35.96 E-value=23 Score=32.77 Aligned_cols=30 Identities=37% Similarity=0.551 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 5 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 34 (260)
T 1x1t_A 5 KVAVVTGST-SGIGLGI-----ATALAAQGADIVLN 34 (260)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHcCCEEEEE
Confidence 789999984 7777654 45677789988765
No 307
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=35.91 E-value=18 Score=33.87 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- ||||+.+ .+.|-++|++|.+.
T Consensus 12 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~ 41 (262)
T 3ksu_A 12 KVIVIAGGI-KNLGALT-----AKTFALESVNLVLH 41 (262)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHTTSSCEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 689999986 7887654 46677789888764
No 308
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=35.86 E-value=25 Score=31.58 Aligned_cols=34 Identities=44% Similarity=0.734 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|-++||||- ++||+.+ .+.|.++|++|.+.-.++
T Consensus 3 k~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~r~~ 36 (242)
T 1uay_A 3 RSALVTGGA-SGLGRAA-----ALALKARGYRVVVLDLRR 36 (242)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHHTCEEEEEESSC
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEccCc
Confidence 679999985 7777654 456667899998865443
No 309
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=35.85 E-value=23 Score=33.04 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|-|+||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 32 k~vlITGas-ggIG~~-----la~~L~~~G~~V~~~~r 63 (272)
T 1yb1_A 32 EIVLITGAG-HGIGRL-----TAYEFAKLKSKLVLWDI 63 (272)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEEc
Confidence 679999985 677764 45667778998877543
No 310
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=35.81 E-value=23 Score=33.54 Aligned_cols=31 Identities=32% Similarity=0.536 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 29 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 59 (283)
T 3v8b_A 29 PVALITGAG-SGIGRAT-----ALALAADGVTVGALG 59 (283)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999985 6777654 466777899887653
No 311
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=35.74 E-value=23 Score=33.81 Aligned_cols=32 Identities=28% Similarity=0.463 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|-++||||- ||||+.+ .+.|-+.|.+|.+.-.
T Consensus 8 KvalVTGas-~GIG~ai-----A~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 8 KVVIVTGAG-SGIGRAI-----AKKFALNDSIVVAVEL 39 (254)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHcCCEEEEEEC
Confidence 789999984 7888765 4667788999877544
No 312
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=35.68 E-value=21 Score=33.58 Aligned_cols=30 Identities=40% Similarity=0.629 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|-++||||- +|||+. +.+.|.++|++|.+.
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~ 58 (266)
T 3uxy_A 29 KVALVTGAA-GGIGGA-----VVTALRAAGARVAVA 58 (266)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 677764 456677889999875
No 313
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=35.64 E-value=24 Score=33.05 Aligned_cols=32 Identities=34% Similarity=0.421 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++|||| -+|||+.+ .+.|..+|++|.+.-.
T Consensus 22 k~vlVTGa-s~gIG~ai-----a~~l~~~G~~V~~~~r 53 (273)
T 1ae1_A 22 TTALVTGG-SKGIGYAI-----VEELAGLGARVYTCSR 53 (273)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECC-cchHHHHH-----HHHHHHCCCEEEEEeC
Confidence 67999998 47777654 4566778998877533
No 314
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=35.52 E-value=35 Score=30.38 Aligned_cols=45 Identities=24% Similarity=0.326 Sum_probs=32.7
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 012331 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (466)
Q Consensus 111 vqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGt-vGdiEs~pf~ea~rq~ 166 (466)
..+||-= ++|++.|++... .++|++|+ .||| +|+--=.| ||++++
T Consensus 46 ~~iv~Dd-~~i~~al~~a~~-------~~~DlVit-tGG~s~g~~D~t~--eal~~~ 91 (164)
T 3pzy_A 46 PEVVADG-SPVGEALRKAID-------DDVDVILT-SGGTGIAPTDSTP--DQTVAV 91 (164)
T ss_dssp CEEECSS-HHHHHHHHHHHH-------TTCSEEEE-ESCCSSSTTCCHH--HHHHTT
T ss_pred EEEeCCH-HHHHHHHHHHHh-------CCCCEEEE-CCCCCCCCCccHH--HHHHHH
Confidence 4588888 889999988752 35898877 7777 66654455 788776
No 315
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=35.38 E-value=25 Score=32.38 Aligned_cols=32 Identities=41% Similarity=0.571 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|-++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 3 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 34 (247)
T 3dii_A 3 RGVIVTGGG-HGIGKQ-----ICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999986 677765 45667788999988643
No 316
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=35.31 E-value=19 Score=34.46 Aligned_cols=30 Identities=43% Similarity=0.459 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- ||||+. +.+.|-+.|.+|.+.
T Consensus 10 KvalVTGas-~GIG~a-----ia~~la~~Ga~Vvi~ 39 (255)
T 4g81_D 10 KTALVTGSA-RGLGFA-----YAEGLAAAGARVILN 39 (255)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999986 788875 457788899988764
No 317
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=35.31 E-value=23 Score=32.74 Aligned_cols=31 Identities=39% Similarity=0.548 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 6 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 36 (254)
T 1hdc_A 6 KTVIITGGA-RGLGAEA-----ARQAVAAGARVVLAD 36 (254)
T ss_dssp SEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 6777654 456777899987753
No 318
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=35.29 E-value=32 Score=32.25 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=27.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC----CCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC----GLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~----g~~v~~~K 38 (466)
+||++.| .+|-||+..+.-|...|+.+ |++|...+
T Consensus 26 ~~I~~eG--~~GsGKsT~~~~l~~~l~~~~~~~g~~v~~~r 64 (227)
T 3v9p_A 26 KFITFEG--IDGAGKTTHLQWFCDRLQERLGPAGRHVVVTR 64 (227)
T ss_dssp CEEEEEC--CC---CHHHHHHHHHHHHHHHGGGTCCEEEEE
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHhhccccceeeeeec
Confidence 5888998 58999999999999999998 99886543
No 319
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=35.28 E-value=20 Score=33.38 Aligned_cols=29 Identities=34% Similarity=0.678 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
|.++||||- +|||+.+ .+.|-.+|++|.+
T Consensus 26 k~vlITGas-~gIG~~~-----a~~l~~~G~~v~~ 54 (269)
T 3gk3_A 26 RVAFVTGGM-GGLGAAI-----SRRLHDAGMAVAV 54 (269)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHTTTCEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999986 8888754 4667788998865
No 320
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=35.26 E-value=29 Score=32.23 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 12 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 42 (264)
T 3ucx_A 12 KVVVISGVG-PALGTTL-----ARRCAEQGADLVLAA 42 (264)
T ss_dssp CEEEEESCC-TTHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-cHHHHHH-----HHHHHHCcCEEEEEe
Confidence 789999984 7888754 456777899987753
No 321
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=35.02 E-value=22 Score=34.30 Aligned_cols=31 Identities=32% Similarity=0.521 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.=
T Consensus 28 k~vlVTGas-~GIG~ai-----a~~la~~G~~Vv~~~ 58 (322)
T 3qlj_A 28 RVVIVTGAG-GGIGRAH-----ALAFAAEGARVVVND 58 (322)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEC
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999986 7888754 456677899988763
No 322
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=35.01 E-value=40 Score=29.92 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=27.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
||-|+||||- |-+.+.+.+.|.++|++|.++--+|
T Consensus 4 m~~ilItGat------G~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGAS------GFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCC------HHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCC------chHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4569999975 7777788888999999998876553
No 323
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=34.94 E-value=1e+02 Score=29.23 Aligned_cols=67 Identities=15% Similarity=0.151 Sum_probs=41.9
Q ss_pred CCCeEEEEEeccCCch---hhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEec
Q 012331 295 HEPVRIAMVGKYTGLS---DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 369 (466)
Q Consensus 295 ~~~v~IaIVgkY~g~~---Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllP 369 (466)
.+.+||||+- +++++ +++..+.++|+..|+.....+++.+.+++ .|+++-....+.+ .++|.|+..
T Consensus 6 ~~~~~igi~q-~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~--------gd~~~~~~~~~~l~~~~~DlIiai 76 (302)
T 3lkv_A 6 AKTAKVAVSQ-IVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQ--------GNPAIAVQIARQFVGENPDVLVGI 76 (302)
T ss_dssp -CCEEEEEEE-SCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECT--------TCHHHHHHHHHHHHTTCCSEEEEE
T ss_pred cCCceEEEEE-eecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCC--------CCHHHHHHHHHHHHhcCCcEEEEc
Confidence 3578999986 76543 46677899999999876554555555553 2333333333344 468988754
Q ss_pred C
Q 012331 370 G 370 (466)
Q Consensus 370 G 370 (466)
+
T Consensus 77 ~ 77 (302)
T 3lkv_A 77 A 77 (302)
T ss_dssp S
T ss_pred C
Confidence 4
No 324
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=34.88 E-value=34 Score=34.80 Aligned_cols=32 Identities=31% Similarity=0.446 Sum_probs=28.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.|-||| +=||+.|++=|+.+|++.|++|...
T Consensus 105 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~ 136 (439)
T 2x5o_A 105 PIVAITG----SNGKSTVTTLVGEMAKAAGVNVGVG 136 (439)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 5788888 5699999999999999999998753
No 325
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=34.82 E-value=27 Score=33.25 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- ||||+.+ ...|-+.|.+|.+.
T Consensus 8 KvalVTGas-~GIG~ai-----a~~la~~Ga~Vv~~ 37 (258)
T 4gkb_A 8 KVVIVTGGA-SGIGGAI-----SMRLAEERAIPVVF 37 (258)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHcCCEEEEE
Confidence 789999985 8888765 46677888887664
No 326
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=34.79 E-value=20 Score=33.87 Aligned_cols=30 Identities=33% Similarity=0.511 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+. +.+.|-++|++|.+.
T Consensus 27 k~~lVTGas-~gIG~a-----ia~~la~~G~~V~~~ 56 (271)
T 4ibo_A 27 RTALVTGSS-RGLGRA-----MAEGLAVAGARILIN 56 (271)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 689999985 777764 456677889988774
No 327
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=34.77 E-value=24 Score=30.01 Aligned_cols=25 Identities=16% Similarity=0.328 Sum_probs=19.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll 27 (466)
|+.|++|| .+|-||...|.-|...|
T Consensus 2 ~~~I~l~G--~~GsGKsT~a~~La~~l 26 (173)
T 1e6c_A 2 TEPIFMVG--ARGCGMTTVGRELARAL 26 (173)
T ss_dssp CCCEEEES--CTTSSHHHHHHHHHHHH
T ss_pred CceEEEEC--CCCCCHHHHHHHHHHHh
Confidence 57899999 58999987776666544
No 328
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=34.72 E-value=25 Score=32.62 Aligned_cols=31 Identities=26% Similarity=0.374 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 8 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 38 (262)
T 1zem_A 8 KVCLVTGAG-GNIGLA-----TALRLAEEGTAIALLD 38 (262)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999984 777765 4466778899987764
No 329
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=34.61 E-value=28 Score=33.39 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=26.1
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv-~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- -||||+.+ .+.|-.+|++|.+.=.
T Consensus 10 k~~lVTGa~~s~GIG~ai-----a~~la~~G~~Vv~~~r 43 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAI-----AKHLASAGARVALGTW 43 (315)
T ss_dssp CEEEEECCSSSSSHHHHH-----HHHHHTTTCEEEEEEC
T ss_pred CEEEEeCCCCCCChHHHH-----HHHHHHCCCEEEEEec
Confidence 789999995 89999865 4567778999988643
No 330
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=34.60 E-value=2.6e+02 Score=25.26 Aligned_cols=82 Identities=9% Similarity=-0.061 Sum_probs=43.2
Q ss_pred CCeEEEEEeccCCchhhH-----HHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEe
Q 012331 296 EPVRIAMVGKYTGLSDAY-----LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILV 368 (466)
Q Consensus 296 ~~v~IaIVgkY~g~~Day-----~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIll 368 (466)
+..+||++-.. ..+.| ..+.++++..|+.+.+ .+++. +++.-....+.+ .++||||+
T Consensus 7 ~~~~Ig~i~~~--~~~~~~~~~~~gi~~~a~~~g~~~~~------~~~~~--------~~~~~~~~~~~l~~~~vdgiI~ 70 (293)
T 3l6u_A 7 KRNIVGFTIVN--DKHEFAQRLINAFKAEAKANKYEALV------ATSQN--------SRISEREQILEFVHLKVDAIFI 70 (293)
T ss_dssp --CEEEEEESC--SCSHHHHHHHHHHHHHHHHTTCEEEE------EECSS--------CHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCcEEEEEEec--CCcHHHHHHHHHHHHHHHHcCCEEEE------ECCCC--------CHHHHHHHHHHHHHcCCCEEEE
Confidence 34589988643 22333 3455667777776654 23321 111111112222 47999999
Q ss_pred cCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 369 PGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 369 PGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.+...+ . ....++.+.+.++|+.-+
T Consensus 71 ~~~~~~-~---~~~~~~~~~~~~iPvV~~ 95 (293)
T 3l6u_A 71 TTLDDV-Y---IGSAIEEAKKAGIPVFAI 95 (293)
T ss_dssp ECSCTT-T---THHHHHHHHHTTCCEEEE
T ss_pred ecCChH-H---HHHHHHHHHHcCCCEEEe
Confidence 764221 1 224566777789998765
No 331
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=34.56 E-value=40 Score=31.47 Aligned_cols=31 Identities=29% Similarity=0.380 Sum_probs=23.7
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 4 i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|+||||- |-+.+.|...|.++|++|..+-.+
T Consensus 3 vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 3 IVVTGGA------GFIGSHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp EEEETTT------SHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEECCC------ChHHHHHHHHHHhCCCEEEEEeCC
Confidence 8999974 555667777888899999887443
No 332
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=34.54 E-value=26 Score=33.50 Aligned_cols=30 Identities=43% Similarity=0.725 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|-++||||- ||||+.+ .+.|-+.|.+|.+.
T Consensus 10 KvalVTGas-~GIG~ai-----A~~la~~Ga~Vvi~ 39 (247)
T 4hp8_A 10 RKALVTGAN-TGLGQAI-----AVGLAAAGAEVVCA 39 (247)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCcC-CHHHHHH-----HHHHHHcCCEEEEE
Confidence 679999985 8888765 47788999999775
No 333
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=34.44 E-value=24 Score=32.27 Aligned_cols=30 Identities=30% Similarity=0.504 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.|+||||- ++||+. +.+.|.++|++|.+.
T Consensus 8 k~vlITGas-ggiG~~-----~a~~l~~~G~~V~~~ 37 (261)
T 1gee_A 8 KVVVITGSS-TGLGKS-----MAIRFATEKAKVVVN 37 (261)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEE
Confidence 689999985 777764 445666789887764
No 334
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=34.40 E-value=21 Score=34.70 Aligned_cols=30 Identities=33% Similarity=0.475 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 10 k~~lVTGas-~GIG~~~-----a~~La~~Ga~Vv~~ 39 (319)
T 1gz6_A 10 RVVLVTGAG-GGLGRAY-----ALAFAERGALVVVN 39 (319)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 689999986 7888765 46677789998874
No 335
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=34.31 E-value=28 Score=31.96 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCe-eEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLR-VTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~-v~~~K 38 (466)
|-++|||| -+|||+.+ .+.|-++|++ |.+.-
T Consensus 6 k~vlVtGa-s~gIG~~~-----a~~l~~~G~~~v~~~~ 37 (254)
T 1sby_A 6 KNVIFVAA-LGGIGLDT-----SRELVKRNLKNFVILD 37 (254)
T ss_dssp CEEEEETT-TSHHHHHH-----HHHHHHTCCSEEEEEE
T ss_pred cEEEEECC-CChHHHHH-----HHHHHHCCCcEEEEEe
Confidence 67999998 47787654 4556778986 66653
No 336
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=34.17 E-value=27 Score=32.14 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+ ++.+.|-++|++|.+.=.
T Consensus 10 k~vlITGas-~gIG~-----~~a~~l~~~G~~V~~~~r 41 (261)
T 3n74_A 10 KVALITGAG-SGFGE-----GMAKRFAKGGAKVVIVDR 41 (261)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHH-----HHHHHHHHCCCEEEEEcC
Confidence 789999996 77775 455667788999887643
No 337
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=34.16 E-value=26 Score=33.48 Aligned_cols=31 Identities=26% Similarity=0.390 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 35 k~vlVTGas-~gIG~ai-----a~~L~~~G~~V~~~~ 65 (291)
T 3cxt_A 35 KIALVTGAS-YGIGFAI-----ASAYAKAGATIVFND 65 (291)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 7777754 455667899887753
No 338
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=34.02 E-value=2.6e+02 Score=26.23 Aligned_cols=91 Identities=16% Similarity=0.108 Sum_probs=50.6
Q ss_pred CCCeEEEEEeccCCch-----hhHHHHHHHHHHcCC-ceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc---cCCCE
Q 012331 295 HEPVRIAMVGKYTGLS-----DAYLSILKALLHASV-DLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL---KGADG 365 (466)
Q Consensus 295 ~~~v~IaIVgkY~g~~-----Day~SI~~aL~~aG~-~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L---~~~DG 365 (466)
.++++||++-...+.. +....+..+++..|. -...++++.+.+... +|+........+ .++|+
T Consensus 4 ~~~i~IG~~~p~sg~~~~~g~~~~~g~~~a~~~~~~~i~G~~i~l~~~D~~~--------~~~~~~~~~~~li~~~~v~~ 75 (368)
T 4eyg_A 4 EDTFKVGLIVPMTGGQASTGKQIDNAIKLYIKKHGDTVAGKKIEVILKDDAA--------IPDNTKRLAQELIVNDKVNV 75 (368)
T ss_dssp CCEEEEEEEECSSSTTHHHHHHHHHHHHHHHHHHCSEETTEEEEEEEEECTT--------CHHHHHHHHHHHHHTSCCSE
T ss_pred CCcEEEEEEeCCcCcchhccHHHHHHHHHHHHHcCCCCCCeEEEEEEeCCCC--------CHHHHHHHHHHHHhcCCcEE
Confidence 3578999998655422 233345566666665 234556666666532 232222222333 46899
Q ss_pred EEecCCCCCCCchhHHHHHHHHHHcCCcEEEeh
Q 012331 366 ILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (466)
Q Consensus 366 IllPGGfG~rg~eG~i~aIk~are~~iPvLGIC 398 (466)
||-|-+. .....+...+.+.++|++..+
T Consensus 76 iiG~~~s-----~~~~~~~~~~~~~~ip~i~~~ 103 (368)
T 4eyg_A 76 IAGFGIT-----PAALAAAPLATQAKVPEIVMA 103 (368)
T ss_dssp EEECSSH-----HHHHHHHHHHHHHTCCEEESS
T ss_pred EECCCcc-----HHHHHHHHHHHhCCceEEecc
Confidence 8844321 123344556667899998774
No 339
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=34.01 E-value=55 Score=28.16 Aligned_cols=32 Identities=28% Similarity=0.312 Sum_probs=25.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVT 35 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~ 35 (466)
++|++||. +|-||=..+..|...|+..|+.+.
T Consensus 6 ~~i~l~G~--~GsGKST~~~~L~~~l~~~g~~~i 37 (179)
T 2pez_A 6 CTVWLTGL--SGAGKTTVSMALEEYLVCHGIPCY 37 (179)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHhhCCCcEE
Confidence 57899996 888998888888888877787654
No 340
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=33.90 E-value=44 Score=31.28 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=30.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~-~g~~v~~ 36 (466)
++|+++|. +|-||...+..|...|.. +|++|..
T Consensus 22 ~~i~~~G~--~g~GKst~~~~l~~~l~~~~g~~v~~ 55 (223)
T 3ld9_A 22 MFITFEGI--DGSGKTTQSHLLAEYLSEIYGVNNVV 55 (223)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCGGGEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhccCceeeE
Confidence 68999985 799999999999999999 9998876
No 341
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=33.90 E-value=76 Score=30.22 Aligned_cols=32 Identities=6% Similarity=-0.024 Sum_probs=22.4
Q ss_pred CCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEeh
Q 012331 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (466)
Q Consensus 362 ~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGIC 398 (466)
++|||++.+ . . ......++.+.+.++|+.-+.
T Consensus 62 ~vDgiIi~~-~--~--~~~~~~~~~~~~~giPvV~~~ 93 (350)
T 3h75_A 62 KPDYLMLVN-E--Q--YVAPQILRLSQGSGIKLFIVN 93 (350)
T ss_dssp CCSEEEEEC-C--S--SHHHHHHHHHTTSCCEEEEEE
T ss_pred CCCEEEEeC-c--h--hhHHHHHHHHHhCCCcEEEEc
Confidence 899999975 1 1 123456677778899997664
No 342
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=33.89 E-value=1.4e+02 Score=27.39 Aligned_cols=33 Identities=18% Similarity=0.061 Sum_probs=21.9
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.++|||++.+.... .....++.+.+.++|+.-+
T Consensus 60 ~~vdgiIi~~~~~~----~~~~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 60 KNPAGIAISAIDPV----ELTDTINKAVDAGIPIVLF 92 (305)
T ss_dssp HCCSEEEECCSSTT----TTHHHHHHHHHTTCCEEEE
T ss_pred hCCCEEEEcCCCHH----HHHHHHHHHHHCCCcEEEE
Confidence 47999999774321 1234566777788998654
No 343
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=33.89 E-value=23 Score=33.24 Aligned_cols=30 Identities=27% Similarity=0.452 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 28 k~~lVTGas-~GIG~ai-----a~~l~~~G~~V~~~ 57 (277)
T 4fc7_A 28 KVAFITGGG-SGIGFRI-----AEIFMRHGCHTVIA 57 (277)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHTTTCEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 789999994 7777654 45666789988765
No 344
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=33.88 E-value=20 Score=33.76 Aligned_cols=31 Identities=35% Similarity=0.595 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.|+||||- ++||+.++ +.|.++|++|.+.-
T Consensus 45 k~vlITGas-ggIG~~la-----~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 45 KVALVTGAG-RGIGREIA-----KMLAKSVSHVICIS 75 (285)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHTTTSSEEEEEE
T ss_pred CEEEEECCC-cHHHHHHH-----HHHHHcCCEEEEEc
Confidence 679999986 77877554 55667899887743
No 345
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=33.81 E-value=23 Score=32.70 Aligned_cols=30 Identities=47% Similarity=0.567 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 7 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~ 36 (253)
T 1hxh_A 7 KVALVTGGA-SGVGLEV-----VKLLLGEGAKVAFS 36 (253)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999984 6777654 45677789998775
No 346
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=33.81 E-value=24 Score=33.23 Aligned_cols=30 Identities=37% Similarity=0.525 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 30 k~vlVTGas-~gIG~ai-----a~~L~~~G~~V~~~ 59 (276)
T 2b4q_A 30 RIALVTGGS-RGIGQMI-----AQGLLEAGARVFIC 59 (276)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEE
Confidence 689999984 7777654 45677789988765
No 347
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=33.77 E-value=35 Score=32.31 Aligned_cols=31 Identities=26% Similarity=0.500 Sum_probs=21.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
||-|+||||- |-+.+.+.+.|.++|++|..+
T Consensus 1 M~~vlVTGat------G~iG~~l~~~L~~~g~~V~~~ 31 (347)
T 1orr_A 1 MAKLLITGGC------GFLGSNLASFALSQGIDLIVF 31 (347)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEeCCC------chhHHHHHHHHHhCCCEEEEE
Confidence 6779999973 344456666677789988875
No 348
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=33.77 E-value=25 Score=31.91 Aligned_cols=32 Identities=28% Similarity=0.440 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.|+||||- ++||+ ++.+.|.++|++|.+.=.
T Consensus 7 k~vlVtGas-ggiG~-----~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 7 KVAIITGGT-LGIGL-----AIATKFVEEGAKVMITGR 38 (251)
T ss_dssp CEEEETTTT-SHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCC-ChHHH-----HHHHHHHHCCCEEEEEeC
Confidence 679999983 66665 455667778998887643
No 349
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=33.71 E-value=26 Score=32.98 Aligned_cols=31 Identities=35% Similarity=0.503 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.|+||||- +|||+. +.+.|.++|++|.+.=
T Consensus 19 k~vlVTGas-ggIG~~-----la~~l~~~G~~V~~~~ 49 (303)
T 1yxm_A 19 QVAIVTGGA-TGIGKA-----IVKELLELGSNVVIAS 49 (303)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999984 777764 4456777899887753
No 350
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=33.68 E-value=25 Score=32.39 Aligned_cols=33 Identities=30% Similarity=0.460 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|.|+|||| -++||+.+ .+.|.++|++|.+.-.+
T Consensus 15 k~vlITGa-sggiG~~l-----a~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 15 KTVLVTGG-TKGIGHAI-----VEEFAGFGAVIHTCARN 47 (266)
T ss_dssp CEEEETTT-TSHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CCHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 67999998 46777654 45566789988776433
No 351
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=33.67 E-value=25 Score=32.55 Aligned_cols=31 Identities=42% Similarity=0.686 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+. +.+.|-++|++|.+.-
T Consensus 7 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 37 (257)
T 3imf_A 7 KVVIITGGS-SGMGKG-----MATRFAKEGARVVITG 37 (257)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 677754 4566778899987753
No 352
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=33.57 E-value=25 Score=32.32 Aligned_cols=30 Identities=33% Similarity=0.527 Sum_probs=21.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.|+||||- ++||+-+ .+.|..+|++|.+.
T Consensus 22 k~vlItGas-ggiG~~l-----a~~l~~~G~~v~~~ 51 (274)
T 1ja9_A 22 KVALTTGAG-RGIGRGI-----AIELGRRGASVVVN 51 (274)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 679999984 6777654 45677789888764
No 353
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=33.55 E-value=44 Score=33.12 Aligned_cols=50 Identities=28% Similarity=0.410 Sum_probs=37.7
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc--------------cccCCC--CCCCccccc
Q 012331 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP--------------YLNTDA--GTMSPFEHG 56 (466)
Q Consensus 3 ~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp--------------Yln~d~--gtmsp~~hg 56 (466)
.++|+| -||-||-.++..+-..+..+|.+|.+ +|| |+++++ +.+||++..
T Consensus 37 ~~~i~G--~~G~GKs~~~~~~~~~~~~~~~~~~~--~D~~~~~~~~~~~~gg~~~~~~~~~~~~NPf~~~ 102 (392)
T 4ag6_A 37 NWTILA--KPGAGKSFTAKMLLLREYMQGSRVII--IDPEREYKEMCRKLGGVWINCTGGEGKINPLQVR 102 (392)
T ss_dssp CEEEEC--CTTSSHHHHHHHHHHHHHTTTCCEEE--EESSCCSHHHHHHTTCEEEETTSGGGCCCTTSCC
T ss_pred ceEEEc--CCCCCHHHHHHHHHHHHHHCCCEEEE--EeCCcCHHHHHHHcCCEEEEECCCCCeecceecc
Confidence 467777 58999999999999888889988877 576 455554 366777653
No 354
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=33.51 E-value=34 Score=31.97 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=24.6
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||-- +|||+.+ .+.|-.+|++|.+.-
T Consensus 7 k~vlVTGas~~~gIG~~~-----a~~l~~~G~~V~~~~ 39 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGI-----AQSCFNQGATLAFTY 39 (275)
T ss_dssp CEEEEECCCSTTSHHHHH-----HHHHHTTTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHH-----HHHHHHCCCEEEEEe
Confidence 6899999964 8899754 456777899987753
No 355
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=33.50 E-value=25 Score=33.92 Aligned_cols=31 Identities=29% Similarity=0.462 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+. +.+.|-++|++|.++-
T Consensus 47 k~~lVTGas-~GIG~a-----ia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 47 KVAFITGAA-RGQGRT-----HAVRLAQDGADIVAID 77 (317)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCeEEEEe
Confidence 689999985 777764 4566778899998763
No 356
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=33.45 E-value=23 Score=33.25 Aligned_cols=29 Identities=34% Similarity=0.547 Sum_probs=21.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
|.++||||- ||||+. +.+.|-++|++|.+
T Consensus 28 k~~lVTGas-~GIG~a-----ia~~la~~G~~Vv~ 56 (267)
T 3u5t_A 28 KVAIVTGAS-RGIGAA-----IAARLASDGFTVVI 56 (267)
T ss_dssp CEEEEESCS-SHHHHH-----HHHHHHHHTCEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEE
Confidence 679999984 677764 44566677998865
No 357
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=33.38 E-value=23 Score=32.18 Aligned_cols=31 Identities=26% Similarity=0.537 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-|+||||- ++||+.+ .+.|.++|++|.+.-
T Consensus 12 ~~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~ 42 (255)
T 1fmc_A 12 KCAIITGAG-AGIGKEI-----AITFATAGASVVVSD 42 (255)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHTTTCEEEEEE
T ss_pred CEEEEECCc-cHHHHHH-----HHHHHHCCCEEEEEc
Confidence 679999984 6777654 456667899887753
No 358
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=33.34 E-value=27 Score=32.90 Aligned_cols=31 Identities=35% Similarity=0.407 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 25 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 55 (279)
T 3sju_A 25 QTAFVTGVS-SGIGLAV-----ARTLAARGIAVYGCA 55 (279)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 689999985 7777654 456667899887653
No 359
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=33.29 E-value=25 Score=32.81 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|-++||||- ||||+.+ .+.|-++|++|.+.-.
T Consensus 21 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 21 KRALITGAT-KGIGADI-----ARAFAAAGARLVLSGR 52 (266)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999985 7777654 4667788998877644
No 360
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=33.28 E-value=30 Score=32.17 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++|||| -++||+.++ +.|.++|++|.+.-
T Consensus 35 k~vlITGa-sggIG~~la-----~~L~~~G~~V~~~~ 65 (279)
T 3ctm_A 35 KVASVTGS-SGGIGWAVA-----EAYAQAGADVAIWY 65 (279)
T ss_dssp CEEEETTT-TSSHHHHHH-----HHHHHHTCEEEEEE
T ss_pred CEEEEECC-CcHHHHHHH-----HHHHHCCCEEEEEe
Confidence 67999998 478887544 45666799887753
No 361
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=33.26 E-value=28 Score=32.69 Aligned_cols=30 Identities=33% Similarity=0.472 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 30 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 59 (283)
T 1g0o_A 30 KVALVTGAG-RGIGREM-----AMELGRRGCKVIVN 59 (283)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999984 7777754 45667789988764
No 362
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=33.07 E-value=26 Score=32.85 Aligned_cols=31 Identities=32% Similarity=0.430 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-++||||- +|||+. +.+.|-++|++|.+.-
T Consensus 28 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~~ 58 (266)
T 3grp_A 28 RKALVTGAT-GGIGEA-----IARCFHAQGAIVGLHG 58 (266)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999985 777765 4567778899887653
No 363
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=33.07 E-value=2.7e+02 Score=25.04 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=22.0
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEeh
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGIC 398 (466)
.++||||+.+... ...++.+.+.++|+.-+.
T Consensus 62 ~~vdgiIi~~~~~-------~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 62 RGFDGLILQSFSN-------PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp TTCSEEEEESSCC-------HHHHHHHHTTSSCEEEES
T ss_pred CCCCEEEEecCCc-------HHHHHHHHHCCCCEEEEe
Confidence 4799999987432 345667777889986553
No 364
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=32.90 E-value=25 Score=34.21 Aligned_cols=31 Identities=35% Similarity=0.363 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+. +.+.|.++|++|.+.=
T Consensus 47 k~~lVTGas-~GIG~a-----ia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 47 PVALVTGAA-KRLGRS-----IAEGLHAEGYAVCLHY 77 (328)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEc
Confidence 679999986 777775 4566778899988763
No 365
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=32.84 E-value=27 Score=32.03 Aligned_cols=34 Identities=26% Similarity=0.290 Sum_probs=24.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC---CeeEEeeec
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG---LRVTCIKID 40 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g---~~v~~~K~D 40 (466)
+|.|+||||- ++||+. +.+.|.++| ++|.+.-.+
T Consensus 21 ~k~vlITGas-ggIG~~-----la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 21 MNSILITGCN-RGLGLG-----LVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp CSEEEESCCS-SHHHHH-----HHHHHHTSSSCCSEEEEEESC
T ss_pred CCEEEEECCC-CcHHHH-----HHHHHHhcCCCCcEEEEEecC
Confidence 4789999984 777764 455677788 888776443
No 366
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=32.84 E-value=37 Score=31.84 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=24.3
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-++||||-- +|||+.++ +.|.++|++|.+.-
T Consensus 22 k~vlVTGas~~~gIG~~ia-----~~l~~~G~~V~~~~ 54 (285)
T 2p91_A 22 KRALITGVANERSIAYGIA-----KSFHREGAQLAFTY 54 (285)
T ss_dssp CEEEECCCSSTTSHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHHH-----HHHHHcCCEEEEEe
Confidence 6799999964 78998654 55667899887753
No 367
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=32.74 E-value=29 Score=33.80 Aligned_cols=30 Identities=37% Similarity=0.560 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- ||||+ ++.+.|-++|++|...
T Consensus 6 k~vlVTGas-~GIG~-----aia~~L~~~G~~V~~~ 35 (324)
T 3u9l_A 6 KIILITGAS-SGFGR-----LTAEALAGAGHRVYAS 35 (324)
T ss_dssp CEEEESSCS-SHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHH-----HHHHHHHHCCCEEEEe
Confidence 689999985 77776 4556677889988654
No 368
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=32.62 E-value=29 Score=32.04 Aligned_cols=31 Identities=29% Similarity=0.559 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.|+||||- +|||+- +.+.|.++|++|.+.-
T Consensus 17 k~vlITGas-ggiG~~-----~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGGA-GGIGET-----TAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEc
Confidence 679999984 677764 4456677899988753
No 369
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=32.52 E-value=39 Score=31.28 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=24.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-++||||-- +|||+.+ .+.|.++|++|.+.-
T Consensus 10 k~vlVTGas~~~gIG~~i-----a~~l~~~G~~V~~~~ 42 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGI-----AQAMHREGAELAFTY 42 (265)
T ss_dssp CEEEECCCCSTTSHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCCHHHHH-----HHHHHHCCCEEEEEc
Confidence 6799999964 7898754 456777899887753
No 370
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=32.41 E-value=26 Score=30.65 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~ 36 (466)
++|+++|+ +|-||...+..|...| .|++|..
T Consensus 5 ~~I~l~G~--~GsGKsT~~~~L~~~l--~g~~~~~ 35 (204)
T 2v54_A 5 ALIVFEGL--DKSGKTTQCMNIMESI--PANTIKY 35 (204)
T ss_dssp CEEEEECC--TTSSHHHHHHHHHHTS--CGGGEEE
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHH--CCCceEE
Confidence 58999997 7889987776666544 3666543
No 371
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=32.39 E-value=28 Score=33.18 Aligned_cols=31 Identities=29% Similarity=0.382 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-++||||- ||||+. +.+.|-+.|.+|.+.-
T Consensus 12 K~alVTGas-~GIG~a-----ia~~la~~Ga~V~~~~ 42 (261)
T 4h15_A 12 KRALITAGT-KGAGAA-----TVSLFLELGAQVLTTA 42 (261)
T ss_dssp CEEEESCCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeccC-cHHHHH-----HHHHHHHcCCEEEEEE
Confidence 789999984 788875 4567889999997753
No 372
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=32.25 E-value=2.9e+02 Score=25.12 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=20.7
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEeh
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGIC 398 (466)
.++|||++.+...+ . ..++.+.+.++|+.-+.
T Consensus 66 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 66 RDCDGVVVISHDLH---D---EDLDELHRMHPKMVFLN 97 (290)
T ss_dssp TTCSEEEECCSSSC---H---HHHHHHHHHCSSEEEES
T ss_pred cCccEEEEecCCCC---H---HHHHHHhhcCCCEEEEc
Confidence 47999999774322 1 34455566789987653
No 373
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=32.16 E-value=33 Score=31.94 Aligned_cols=33 Identities=33% Similarity=0.466 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|-++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 22 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 54 (253)
T 2nm0_A 22 RSVLVTGGN-RGIGLA-----IARAFADAGDKVAITYRS 54 (253)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999984 777765 456677889999876443
No 374
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=31.75 E-value=1.5e+02 Score=28.70 Aligned_cols=77 Identities=9% Similarity=0.184 Sum_probs=48.8
Q ss_pred eEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCCc
Q 012331 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg~ 377 (466)
-+|.+|+. . ..+...|.++-+..|+.... =+|++-. ++.... ..+..||.|||-.-
T Consensus 105 ~~iLfVgT--k-~~aq~~V~~~A~~~g~~yv~---~RWlgG~-LTN~~~-----------~~f~~PdlliV~Dp------ 160 (253)
T 3bch_A 105 ADVSVISS--R-NTGQRAVLKFAAATGATPIA---GRFTPGT-FTNQIQ-----------AAFREPRLLVVTDP------ 160 (253)
T ss_dssp GGEEEEEC--S-HHHHHHHHHHHHHHCCEEEE---SCCCTTT-TTCCSC-----------STTCSCSEEEESCT------
T ss_pred CeEEEEeC--C-HHHHHHHHHHHHHhCCeeec---ceecCCc-ccCccc-----------cccCCCCEEEEECC------
Confidence 35788872 2 12445677777777776543 3677543 322210 13467999998862
Q ss_pred hhHHHHHHHHHHcCCcEEEeh
Q 012331 378 QGKILAAKYAREHRIPYLGIC 398 (466)
Q Consensus 378 eG~i~aIk~are~~iPvLGIC 398 (466)
.....++++|...+||+.|||
T Consensus 161 ~~e~~AI~EA~~lgIPvIalv 181 (253)
T 3bch_A 161 RADHQPLTEASYVNLPTIALC 181 (253)
T ss_dssp TTTHHHHHHHHHTTCCEEEEE
T ss_pred CccchHHHHHHHhCCCEEEEE
Confidence 123568899999999999998
No 375
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=31.73 E-value=28 Score=32.66 Aligned_cols=31 Identities=32% Similarity=0.564 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.=
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 37 (280)
T 1xkq_A 7 KTVIITGSS-NGIGRTT-----AILFAQEGANVTITG 37 (280)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 6777754 456677899887753
No 376
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=31.68 E-value=29 Score=32.72 Aligned_cols=30 Identities=37% Similarity=0.626 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+. +.+.|-++|++|.+.
T Consensus 30 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~ 59 (280)
T 4da9_A 30 PVAIVTGGR-RGIGLG-----IARALAASGFDIAIT 59 (280)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEecCC-CHHHHH-----HHHHHHHCCCeEEEE
Confidence 679999984 677765 456667789887664
No 377
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=31.38 E-value=41 Score=31.12 Aligned_cols=24 Identities=33% Similarity=0.439 Sum_probs=17.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHH
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLL 27 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll 27 (466)
..|.|||+ ||-||...|.-|...|
T Consensus 23 ~iI~I~G~--~GSGKST~a~~L~~~l 46 (252)
T 1uj2_A 23 FLIGVSGG--TASGKSSVCAKIVQLL 46 (252)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHT
T ss_pred EEEEEECC--CCCCHHHHHHHHHHHh
Confidence 46899997 5668987776665544
No 378
>2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, C shape; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} PDB: 2xja_A*
Probab=31.37 E-value=49 Score=34.77 Aligned_cols=33 Identities=27% Similarity=0.253 Sum_probs=28.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.|-||| +=||+.|++=|..+|++.|++|-.+.
T Consensus 147 ~vI~VTG----TnGKTTT~~ml~~iL~~~G~~~g~~g 179 (535)
T 2wtz_A 147 TVIGITG----TSGKTTTTYLVEAGLRAAGRVAGLIG 179 (535)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEES
T ss_pred eEEEeeC----CCChHHHHHHHHHHHHHCCCCEEEEC
Confidence 6788888 56999999999999999999987653
No 379
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=31.29 E-value=30 Score=33.38 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-++|||| -||||+.+ .+.|-+.|.+|.+.=
T Consensus 30 KvalVTGa-s~GIG~ai-----A~~la~~Ga~V~i~~ 60 (273)
T 4fgs_A 30 KIAVITGA-TSGIGLAA-----AKRFVAEGARVFITG 60 (273)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCc-CCHHHHHH-----HHHHHHCCCEEEEEE
Confidence 67999998 48888764 567888999987753
No 380
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=31.26 E-value=28 Score=33.23 Aligned_cols=32 Identities=31% Similarity=0.539 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++|||| -+|||+.+ .+.|.++|++|.+.-.
T Consensus 27 k~vlVTGa-s~gIG~ai-----a~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 27 KSVIITGS-SNGIGRSA-----AVIFAKEGAQVTITGR 58 (297)
T ss_dssp CEEEETTC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 67999998 47777754 4567778999887643
No 381
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=31.19 E-value=39 Score=30.25 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=28.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~-~~g~~v~~~K 38 (466)
++|+++|. +|-||-..+..|...|. ..|+++..+-
T Consensus 26 ~~i~~~G~--~GsGKsT~~~~l~~~l~~~~g~~~~~~~ 61 (211)
T 1m7g_A 26 LTIWLTGL--SASGKSTLAVELEHQLVRDRRVHAYRLD 61 (211)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHhccccCCcEEEEC
Confidence 67899985 89999999999999998 7887765544
No 382
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=31.09 E-value=26 Score=33.26 Aligned_cols=31 Identities=32% Similarity=0.568 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- ||||+. +.+.|-++|++|.+.-
T Consensus 9 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 9 KIAIVTGAS-SGIGRA-----AALLFAREGAKVVVTA 39 (280)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEECC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEE
Confidence 679999985 777765 4566777899887753
No 383
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=31.00 E-value=31 Score=32.86 Aligned_cols=30 Identities=33% Similarity=0.502 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- +|||+. +.+.|-++|++|.+.
T Consensus 50 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~ 79 (294)
T 3r3s_A 50 RKALVTGGD-SGIGRA-----AAIAYAREGADVAIN 79 (294)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999984 777765 456677889988764
No 384
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=30.98 E-value=32 Score=32.23 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+. +.+.|-.+|++|.+.-.
T Consensus 16 k~~lVTGas-~gIG~a-----~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAA-RGQGRS-----HAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEec
Confidence 789999985 677654 55677788999887644
No 385
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=30.91 E-value=39 Score=32.68 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=31.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEEe-eeccccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTCI-KIDPYLN 44 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g--~~v~~~-K~DpYln 44 (466)
..|.|+|+ ||-||=..+..|..+|...| .++..+ -.|+|+-
T Consensus 32 ~ii~I~G~--sGsGKSTla~~L~~~l~~~g~~~~~~~iv~~D~f~~ 75 (290)
T 1odf_A 32 LFIFFSGP--QGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYL 75 (290)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHhhhcCCCCceEEEeccccccC
Confidence 46788886 67789999999999998866 555555 7777653
No 386
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=30.87 E-value=38 Score=31.30 Aligned_cols=31 Identities=32% Similarity=0.356 Sum_probs=23.5
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|-++||||-- +|||+.++ +.|.++|++|.+.
T Consensus 9 k~vlVTGas~~~gIG~~ia-----~~l~~~G~~V~~~ 40 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIA-----AKLKEAGAEVALS 40 (261)
T ss_dssp CEEEEESCCSSSSHHHHHH-----HHHHHHTCEEEEE
T ss_pred CEEEEECCCCCCcHHHHHH-----HHHHHCCCEEEEE
Confidence 6799999964 78888654 4566679988775
No 387
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=30.84 E-value=43 Score=31.34 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=25.6
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|.++||||-- ||||+.+ .+.|-++|++|.+.=.+
T Consensus 27 k~vlVTGasg~~GIG~~i-----a~~l~~~G~~V~~~~r~ 61 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGI-----AKAMHREGAELAFTYVG 61 (280)
T ss_dssp CEEEECCCCSTTCHHHHH-----HHHHHHTTCEEEEEECT
T ss_pred CEEEEECCCCCCCHHHHH-----HHHHHHcCCEEEEeeCc
Confidence 7899999854 7898765 45667789998876443
No 388
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=30.77 E-value=39 Score=31.81 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=26.1
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 2 k~i~vtggv-~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|.++||||- -||||+.++ +.|.++|++|.+.-.+|
T Consensus 9 k~~lVTGas~~~GIG~aia-----~~la~~G~~V~~~~r~~ 44 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWAVA-----KSLAAAGAEILVGTWVP 44 (297)
T ss_dssp CEEEEECCSSSSSHHHHHH-----HHHHHTTCEEEEEEEHH
T ss_pred CEEEEECCCCCCChHHHHH-----HHHHHCCCeEEEeeccc
Confidence 679999996 488987654 55677899998864443
No 389
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=30.54 E-value=32 Score=32.29 Aligned_cols=30 Identities=40% Similarity=0.682 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 27 k~vlITGas-ggiG~~l-----a~~L~~~G~~V~~~ 56 (302)
T 1w6u_A 27 KVAFITGGG-TGLGKGM-----TTLLSSLGAQCVIA 56 (302)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 679999985 6777644 45677789998876
No 390
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=30.45 E-value=40 Score=29.33 Aligned_cols=25 Identities=32% Similarity=0.587 Sum_probs=17.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL 32 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~ 32 (466)
+.|++||+ +|-||. +++++|..+|+
T Consensus 9 ~~I~i~G~--~GsGKS----T~~~~La~~g~ 33 (203)
T 1uf9_A 9 IIIGITGN--IGSGKS----TVAALLRSWGY 33 (203)
T ss_dssp EEEEEEEC--TTSCHH----HHHHHHHHTTC
T ss_pred eEEEEECC--CCCCHH----HHHHHHHHCCC
Confidence 57899998 667885 45566666664
No 391
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=30.31 E-value=2.6e+02 Score=25.71 Aligned_cols=81 Identities=14% Similarity=0.184 Sum_probs=42.1
Q ss_pred CeEEEEEeccCCchhhH-----HHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEec
Q 012331 297 PVRIAMVGKYTGLSDAY-----LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 369 (466)
Q Consensus 297 ~v~IaIVgkY~g~~Day-----~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllP 369 (466)
+.+||++-.... +.| ..+.++++..|+.+.+ .++.. +++.-....+.+ .++||||+.
T Consensus 2 ~~~Ig~i~~~~~--~~~~~~~~~gi~~~a~~~g~~l~~------~~~~~--------~~~~~~~~i~~l~~~~vdgiIi~ 65 (306)
T 2vk2_A 2 PLTVGFSQVGSE--SGWRAAETNVAKSEAEKRGITLKI------ADGQQ--------KQENQIKAVRSFVAQGVDAIFIA 65 (306)
T ss_dssp CCEEEEEECCCC--SHHHHHHHHHHHHHHHHHTCEEEE------EECTT--------CHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CeEEEEEeCCCC--CHHHHHHHHHHHHHHHHcCCEEEE------eCCCC--------CHHHHHHHHHHHHHcCCCEEEEe
Confidence 357898864322 223 3355667777776543 23221 111111112222 479999998
Q ss_pred CCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 370 GGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 370 GGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
+.... .. ...++.+.+.++|+.-+
T Consensus 66 ~~~~~-~~---~~~~~~~~~~~iPvV~~ 89 (306)
T 2vk2_A 66 PVVAT-GW---EPVLKEAKDAEIPVFLL 89 (306)
T ss_dssp CSSSS-SC---HHHHHHHHHTTCCEEEE
T ss_pred CCChh-hH---HHHHHHHHHCCCCEEEe
Confidence 64321 11 23455666778998654
No 392
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=30.27 E-value=61 Score=29.50 Aligned_cols=38 Identities=24% Similarity=0.443 Sum_probs=32.1
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 012331 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (466)
Q Consensus 4 i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln 44 (466)
++++| -.|.||=.++..++..|. +|++|.++-.||--+
T Consensus 17 ~~~~G--kgGvGKTTl~~~La~~l~-~g~~v~vvd~D~~~~ 54 (262)
T 1yrb_A 17 VVFVG--TAGSGKTTLTGEFGRYLE-DNYKVAYVNLDTGVK 54 (262)
T ss_dssp EEEEC--STTSSHHHHHHHHHHHHT-TTSCEEEEECCSSCS
T ss_pred EEEeC--CCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCCcc
Confidence 44444 478999999999999999 999999999999654
No 393
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=30.27 E-value=32 Score=31.66 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH---CCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA---CGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~---~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|.+ +|++|.+.=
T Consensus 7 k~~lVTGas-~gIG~~i-----a~~l~~~~~~G~~V~~~~ 40 (259)
T 1oaa_A 7 AVCVLTGAS-RGFGRAL-----APQLARLLSPGSVMLVSA 40 (259)
T ss_dssp EEEEESSCS-SHHHHHH-----HHHHHTTBCTTCEEEEEE
T ss_pred cEEEEeCCC-ChHHHHH-----HHHHHHhhcCCCeEEEEe
Confidence 789999985 7777654 444555 799887753
No 394
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=30.11 E-value=38 Score=31.28 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=26.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeE
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVT 35 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~ 35 (466)
++|+++|. +|-||+..+.-|...|.. |+.|.
T Consensus 27 ~~i~i~G~--~GsGKsT~~~~l~~~l~~-~~~~~ 57 (229)
T 4eaq_A 27 AFITFEGP--EGSGKTTVINEVYHRLVK-DYDVI 57 (229)
T ss_dssp EEEEEECC--TTSCHHHHHHHHHHHHTT-TSCEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhc-CCCce
Confidence 68999995 789999999999998877 76553
No 395
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=30.11 E-value=71 Score=35.37 Aligned_cols=83 Identities=16% Similarity=0.199 Sum_probs=55.0
Q ss_pred CeEEEEEeccCCch--------------h--hHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc
Q 012331 297 PVRIAMVGKYTGLS--------------D--AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL 360 (466)
Q Consensus 297 ~v~IaIVgkY~g~~--------------D--ay~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L 360 (466)
+.+|||+.+...+. . +|.-+++||..+++++.- ++.+++.+ .+.|
T Consensus 438 ~~kVAVLnsWGklRSW~~~~vaHak~~kq~ysy~GilEALsg~~~dV~F------IsfdDI~e-------------~e~L 498 (759)
T 2zuv_A 438 ELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRF------ISFDDVLA-------------HGID 498 (759)
T ss_dssp CSEEEEEESSGGGGTTTTTCSSTTCCCTTTHHHHHHHHHHHTSSSEEEE------EEHHHHHH-------------HCCC
T ss_pred CceEEEEecCCCCcccccccccccccccccccHHHHHHHHhcCCCceEE------ecHHHhcc-------------cccc
Confidence 47999997641111 1 344499999988877754 55544321 0347
Q ss_pred cCCCEEEecCCCCCCCc-------hhHHHHHHHHHHcCCcEEEeh
Q 012331 361 KGADGILVPGGFGNRGV-------QGKILAAKYAREHRIPYLGIC 398 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~-------eG~i~aIk~are~~iPvLGIC 398 (466)
.++|.||.+|-.++.-. ...+++|+....++-=++||.
T Consensus 499 ~d~DVIIn~G~A~TalSgg~~W~~p~~~~aLR~fV~~GGgLIgVG 543 (759)
T 2zuv_A 499 SDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVG 543 (759)
T ss_dssp TTCCEEEEEECTTSTTTCGGGGGCHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCEEEecCcchhcccCccccCCHHHHHHHHHHHHcCCcEEEeC
Confidence 89999998884333211 347889999988888888775
No 396
>3da7_A Barnase circular permutant; circular permutant, protein-protein complex, endonuclease, cytoplasm, protein binding; 2.25A {Bacillus amyloliquefaciens}
Probab=29.95 E-value=40 Score=28.81 Aligned_cols=28 Identities=21% Similarity=0.331 Sum_probs=21.9
Q ss_pred ccceEEEccCCccccCCCCccccccCCCCCCCCcccchH
Q 012331 54 EHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGK 92 (466)
Q Consensus 54 ~hgEvfv~~dg~e~dlDlg~yerf~~~~l~~~~n~t~gk 92 (466)
..|++|+|.| ||+-|.-+..+ .-+|++.
T Consensus 26 ~dg~~y~T~D---------HY~tF~~i~~~--~~~n~~~ 53 (111)
T 3da7_A 26 SDWLIYKTTD---------HYQTFTKIRCA--QVINTFD 53 (111)
T ss_dssp TTCCEEEESS---------TTSCCEECCCS--SCCSHHH
T ss_pred CCCCEEEecc---------hhhhhhcchhh--hhcCCch
Confidence 5689999988 99999999877 4455543
No 397
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=29.94 E-value=50 Score=31.06 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=23.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
||-|+||||- |-+.+.+.+.|.++|++|..+-
T Consensus 1 M~~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~ 32 (330)
T 2c20_A 1 MNSILICGGA------GYIGSHAVKKLVDEGLSVVVVD 32 (330)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCC------cHHHHHHHHHHHhCCCEEEEEe
Confidence 6779999973 5555667777888899998753
No 398
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=29.91 E-value=33 Score=33.10 Aligned_cols=41 Identities=22% Similarity=0.425 Sum_probs=31.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln 44 (466)
+.|.|||| ||-||...|..|...|...|+++..+-.|-|-.
T Consensus 6 ~iIgItG~--sGSGKSTva~~L~~~lg~~~~~~~vI~~D~~~r 46 (290)
T 1a7j_A 6 PIISVTGS--SGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHR 46 (290)
T ss_dssp CEEEEESC--C---CCTHHHHHHHHHHHHTCCEEEEEGGGGBS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCCeeEeecchhhc
Confidence 36889996 788999999999998888888888888887753
No 399
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=29.74 E-value=43 Score=30.88 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=23.3
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||-= ||||+.+ .+.|-++|++|.+.
T Consensus 8 k~vlVTGasg~~GIG~~i-----a~~l~~~G~~V~~~ 39 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGI-----ARSLHEAGARLIFT 39 (266)
T ss_dssp CEEEEECCCSTTSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHH-----HHHHHHCCCEEEEe
Confidence 6799999864 6788754 56677789987664
No 400
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=29.68 E-value=34 Score=31.94 Aligned_cols=31 Identities=32% Similarity=0.525 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 7 k~vlITGas-~gIG~ai-----a~~l~~~G~~V~~~~ 37 (263)
T 2a4k_A 7 KTILVTGAA-SGIGRAA-----LDLFAREGASLVAVD 37 (263)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 7777754 456777899988753
No 401
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=29.65 E-value=44 Score=30.24 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=25.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC-CeeEEeeecc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG-LRVTCIKIDP 41 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g-~~v~~~K~Dp 41 (466)
||-|+||||- ++|| +.|.+.|.++| ++|.+.-.+|
T Consensus 23 mk~vlVtGat-G~iG-----~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILGAG-GQIA-----RHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEETTT-SHHH-----HHHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEEeCC-cHHH-----HHHHHHHHhCCCceEEEEEcCh
Confidence 5789999974 4444 45566777889 8988876554
No 402
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=29.37 E-value=37 Score=32.74 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=28.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
||.+|++.| +.|==.-+-.|++.|+++|+.|++.=-.
T Consensus 23 MRIL~~~~p---~~GHv~P~l~LA~~L~~rGh~Vt~~t~~ 59 (400)
T 4amg_A 23 MRALFITSP---GLSHILPTVPLAQALRALGHEVRYATGG 59 (400)
T ss_dssp CEEEEECCS---SHHHHGGGHHHHHHHHHTTCEEEEEECS
T ss_pred CeEEEECCC---chhHHHHHHHHHHHHHHCCCEEEEEeCc
Confidence 788899877 3343344568899999999999997543
No 403
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=29.24 E-value=29 Score=33.77 Aligned_cols=30 Identities=30% Similarity=0.337 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||- ||||+.+ .+.|-++|++|..+
T Consensus 3 k~vlVTGas-~GIG~al-----a~~L~~~G~~v~~v 32 (327)
T 1jtv_A 3 TVVLITGCS-SGIGLHL-----AVRLASDPSQSFKV 32 (327)
T ss_dssp EEEEESCCS-SHHHHHH-----HHHHHTCTTCCEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCceEEE
Confidence 789999985 7888754 45677788887654
No 404
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=29.06 E-value=48 Score=31.07 Aligned_cols=30 Identities=50% Similarity=0.633 Sum_probs=21.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|| |+||||- |-+.+.+.+.|.++|++|..+
T Consensus 1 m~-vlVTGat------G~iG~~l~~~L~~~G~~V~~~ 30 (311)
T 2p5y_A 1 MR-VLVTGGA------GFIGSHIVEDLLARGLEVAVL 30 (311)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHTTTCEEEEE
T ss_pred CE-EEEEeCC------cHHHHHHHHHHHHCCCEEEEE
Confidence 44 8999974 445556667777889998775
No 405
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=28.82 E-value=3.2e+02 Score=24.55 Aligned_cols=85 Identities=18% Similarity=0.185 Sum_probs=44.0
Q ss_pred eEEEEEeccCC---chhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEecCCC
Q 012331 298 VRIAMVGKYTG---LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (466)
Q Consensus 298 v~IaIVgkY~g---~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllPGGf 372 (466)
.+||++-.... +......+.++++..|+.+.+ ..+.. +++.-....+.+ .++|||++.+..
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~------~~~~~--------~~~~~~~~~~~l~~~~vdgiIi~~~~ 81 (298)
T 3tb6_A 16 KTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLL------TSTNN--------NPDNERRGLENLLSQHIDGLIVEPTK 81 (298)
T ss_dssp CEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEE------EECTT--------CHHHHHHHHHHHHHTCCSEEEECCSS
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEE------EeCCC--------ChHHHHHHHHHHHHCCCCEEEEeccc
Confidence 57888864322 112334466677777776654 23321 111111111222 479999998743
Q ss_pred CCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 373 G~rg~eG~i~aIk~are~~iPvLGI 397 (466)
..- .......++.+.+.++|+.-+
T Consensus 82 ~~~-~~~~~~~~~~~~~~~iPvV~~ 105 (298)
T 3tb6_A 82 SAL-QTPNIGYYLNLEKNGIPFAMI 105 (298)
T ss_dssp TTS-CCTTHHHHHHHHHTTCCEEEE
T ss_pred ccc-cCCcHHHHHHHHhcCCCEEEE
Confidence 221 111234566777788998755
No 406
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=28.73 E-value=24 Score=36.17 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=26.0
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCC-cEEEehHH
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRI-PYLGICLG 400 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~i-PvLGICLG 400 (466)
.++|.||+-||=|. ++.+++.+...++ |+|||=+|
T Consensus 113 ~~~DlVIvlGGDGT-----lL~aa~~~~~~~vpPiLGIN~G 148 (388)
T 3afo_A 113 NRTDLLVTLGGDGT-----ILHGVSMFGNTQVPPVLAFALG 148 (388)
T ss_dssp HHCSEEEEEESHHH-----HHHHHHTTTTSCCCCEEEEECS
T ss_pred cCCCEEEEEeCcHH-----HHHHHHHhcccCCCeEEEEECC
Confidence 46899999997432 4566666666678 89999876
No 407
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=28.51 E-value=35 Score=33.68 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- +|||+.+ .+.|-++|++|.+.=.
T Consensus 46 k~vlVTGas-~GIG~ai-----a~~La~~Ga~Vvl~~r 77 (346)
T 3kvo_A 46 CTVFITGAS-RGIGKAI-----ALKAAKDGANIVIAAK 77 (346)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHTTTCEEEEEES
T ss_pred CEEEEeCCC-hHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 789999996 7777654 5667788998877643
No 408
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=28.45 E-value=56 Score=29.01 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeec
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKID 40 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~-~~g~~v~~~K~D 40 (466)
||-|+||||- +++|+.+ .+.|. ++|++|.+.-.+
T Consensus 5 mk~vlVtGas-g~iG~~~-----~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAA-GQIAQXL-----TATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTT-SHHHHHH-----HHHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCC-cHHHHHH-----HHHHHhcCCceEEEEecC
Confidence 4679999974 5555544 34444 899999887554
No 409
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=28.31 E-value=1.2e+02 Score=25.30 Aligned_cols=75 Identities=16% Similarity=0.191 Sum_probs=43.0
Q ss_pred CCeEEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEecCCCC
Q 012331 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 373 (466)
Q Consensus 296 ~~v~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllPGGfG 373 (466)
+++||.+|+. ....-..+.+.|+..|+++.- .+++- ..+++.+ ..+|-|++==.
T Consensus 7 r~~rILiVdD---~~~~~~~l~~~L~~~G~~v~~-------~a~~g------------~eAl~~~~~~~~DlvllDi~-- 62 (123)
T 2lpm_A 7 RRLRVLVVED---ESMIAMLIEDTLCELGHEVAA-------TASRM------------QEALDIARKGQFDIAIIDVN-- 62 (123)
T ss_dssp CCCCEEEESS---STTTSHHHHHHHHHHCCCCCB-------CSCCH------------HHHHHHHHHCCSSEEEECSS--
T ss_pred CCCEEEEEeC---CHHHHHHHHHHHHHCCCEEEE-------EECCH------------HHHHHHHHhCCCCEEEEecC--
Confidence 4689999994 233446677888889988631 12211 1233333 46898887211
Q ss_pred CCCchhHHHHHHHHHHcCCcEE
Q 012331 374 NRGVQGKILAAKYAREHRIPYL 395 (466)
Q Consensus 374 ~rg~eG~i~aIk~are~~iPvL 395 (466)
=|+..| ++.++..++.++|+.
T Consensus 63 mP~~~G-~el~~~lr~~~ipvI 83 (123)
T 2lpm_A 63 LDGEPS-YPVADILAERNVPFI 83 (123)
T ss_dssp SSSCCS-HHHHHHHHHTCCSSC
T ss_pred CCCCCH-HHHHHHHHcCCCCEE
Confidence 122334 356666777778854
No 410
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=28.22 E-value=2.3e+02 Score=25.73 Aligned_cols=34 Identities=21% Similarity=0.009 Sum_probs=22.0
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEeh
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGIC 398 (466)
.++|||++.+.. .......++.+.+.++|+.-+.
T Consensus 60 ~~vdgiii~~~~----~~~~~~~~~~~~~~~ipvV~~~ 93 (303)
T 3d02_A 60 RKVDAITIVPND----ANVLEPVFKKARDAGIVVLTNE 93 (303)
T ss_dssp TTCSEEEECCSC----HHHHHHHHHHHHHTTCEEEEES
T ss_pred cCCCEEEEecCC----hHHHHHHHHHHHHCCCeEEEEe
Confidence 479999987631 1222345677777889986553
No 411
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=28.18 E-value=40 Score=31.04 Aligned_cols=31 Identities=29% Similarity=0.290 Sum_probs=23.2
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||-= +|||+. +.+.|-.+|++|.+.
T Consensus 21 k~vlITGas~~~giG~~-----~a~~l~~~G~~v~~~ 52 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIE-----AARGCAEMGAAVAIT 52 (267)
T ss_dssp CEEEETTCCSSSSHHHH-----HHHHHHHTSCEEEEC
T ss_pred CEEEEECCCCCCChHHH-----HHHHHHHCCCeEEEE
Confidence 6799999954 688764 456677889988664
No 412
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=28.05 E-value=60 Score=30.71 Aligned_cols=34 Identities=38% Similarity=0.427 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|-|+||||- |-+.+.|.+.|.++|++|...-.||
T Consensus 10 ~~vlVTGat------GfIG~~l~~~Ll~~G~~V~~~~r~~ 43 (338)
T 2rh8_A 10 KTACVVGGT------GFVASLLVKLLLQKGYAVNTTVRDP 43 (338)
T ss_dssp CEEEEECTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEEcCc
Confidence 569999973 5566677777888999998764443
No 413
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=27.99 E-value=3e+02 Score=24.97 Aligned_cols=31 Identities=13% Similarity=0.329 Sum_probs=20.1
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.++||||+.+...+. ..++.+.+.++|+.-+
T Consensus 63 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~ 93 (287)
T 3bbl_A 63 GNVDGFVLSSINYND------PRVQFLLKQKFPFVAF 93 (287)
T ss_dssp TCCSEEEECSCCTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeecCCCc------HHHHHHHhcCCCEEEE
Confidence 469999997643221 3455566678898765
No 414
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=27.81 E-value=83 Score=31.01 Aligned_cols=39 Identities=26% Similarity=0.384 Sum_probs=33.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
.+|.+.|- ||-||=.+++.|+.+++..|.+|.+.-.|.|
T Consensus 130 ~vi~lvG~--nGaGKTTll~~Lag~l~~~~g~V~l~g~D~~ 168 (328)
T 3e70_C 130 YVIMFVGF--NGSGKTTTIAKLANWLKNHGFSVVIAASDTF 168 (328)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCCEEEEEeeccc
Confidence 35667776 9999999999999999999999998877665
No 415
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=27.75 E-value=46 Score=30.11 Aligned_cols=26 Identities=38% Similarity=0.491 Sum_probs=16.9
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHC-CCee
Q 012331 3 YVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRV 34 (466)
Q Consensus 3 ~i~vtggv~s~~gkgi~~as~g~ll~~~-g~~v 34 (466)
.|.+||| +|-||-. +++.|+.+ |+.|
T Consensus 14 iIgltG~--~GSGKST----va~~L~~~lg~~v 40 (192)
T 2grj_A 14 VIGVTGK--IGTGKST----VCEILKNKYGAHV 40 (192)
T ss_dssp EEEEECS--TTSSHHH----HHHHHHHHHCCEE
T ss_pred EEEEECC--CCCCHHH----HHHHHHHhcCCEE
Confidence 5889999 4557854 45555555 7543
No 416
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=27.55 E-value=34 Score=29.23 Aligned_cols=28 Identities=25% Similarity=0.292 Sum_probs=23.5
Q ss_pred chHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 15 GKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 15 gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
|=|.+-.|++..|..+|++|+++-=.|.
T Consensus 9 GaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 9 GTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4478888999999999999999876664
No 417
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=27.53 E-value=32 Score=31.89 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=26.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
||-|+||||- ++||+- +.+.|.++|++|.+.-.++
T Consensus 3 ~k~vlVTGas-g~IG~~-----la~~L~~~G~~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAA-GQLGRV-----MRERLAPMAEILRLADLSP 37 (267)
T ss_dssp EEEEEEESTT-SHHHHH-----HHHHTGGGEEEEEEEESSC
T ss_pred CCEEEEECCC-CHHHHH-----HHHHHHhcCCEEEEEecCC
Confidence 4789999985 666654 5566778899998876665
No 418
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=27.49 E-value=39 Score=29.57 Aligned_cols=22 Identities=36% Similarity=0.505 Sum_probs=15.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHH
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGV 25 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ 25 (466)
+.|++||+ +|-||...+.-|..
T Consensus 11 ~~I~l~G~--~GsGKSTv~~~La~ 32 (184)
T 1y63_A 11 INILITGT--PGTGKTSMAEMIAA 32 (184)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHH
Confidence 57999997 78899765554444
No 419
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=27.48 E-value=55 Score=31.04 Aligned_cols=34 Identities=32% Similarity=0.344 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|-|+||||- |-+.+.+.+.|.++|++|...-.||
T Consensus 6 ~~vlVTGat------GfIG~~l~~~L~~~G~~V~~~~r~~ 39 (337)
T 2c29_D 6 ETVCVTGAS------GFIGSWLVMRLLERGYTVRATVRDP 39 (337)
T ss_dssp CEEEETTTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEECCc
Confidence 569999974 4555667777778999998765444
No 420
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=27.34 E-value=42 Score=28.90 Aligned_cols=60 Identities=18% Similarity=0.162 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCc-------chHHHHHHHhhhhcCCCCEEEEEeeeeee
Q 012331 118 TDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIES-------MPFIEALGQFSYRVGPGNFCLIHVSLVPV 185 (466)
Q Consensus 118 t~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs-------~pf~ea~rq~~~~~g~~n~~~ih~t~vp~ 185 (466)
+..+..++.+... ...||+|+|.+|. .|+-. .-|.+.+++|-..+...+.-.|-++..|.
T Consensus 59 ~~~~~~~~~~~~~------~~~pd~vvi~~G~--ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~ 125 (204)
T 3p94_A 59 TSEMLVRFRQDVI------NLKPKAVVILAGI--NDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPA 125 (204)
T ss_dssp HHHHHHHHHHHTG------GGCEEEEEEECCH--HHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHH------hCCCCEEEEEeec--CccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3455556654332 3469999999985 34432 34556666655444334455555555553
No 421
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=27.26 E-value=72 Score=30.82 Aligned_cols=53 Identities=23% Similarity=0.226 Sum_probs=40.2
Q ss_pred HHHHHHHHCCCeeEEeeecccccCCCCCC-CccccceEEEccCCcc----ccCCCCcc
Q 012331 22 SIGVLLKACGLRVTCIKIDPYLNTDAGTM-SPFEHGEVFVLDDGGE----VDLDLGNY 74 (466)
Q Consensus 22 s~g~ll~~~g~~v~~~K~DpYln~d~gtm-sp~~hgEvfv~~dg~e----~dlDlg~y 74 (466)
-.+.+|++.||+|+.+.-=-|.+-+++.- .|..|==..|+-||.. +|.=+|.+
T Consensus 76 Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~~ 133 (280)
T 2vfb_A 76 LIGYVLAELGYRVRRLAGRVVWLAPPDAPTPAQTHTVLAVTFPGCQGPYLVDVGFGGM 133 (280)
T ss_dssp HHHHHHHHHTCEEEEEEEEECTTCCTTSCCCCSCEEEEEEECTTCSSCEEECSCSGGG
T ss_pred HHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCCCcEEEEEEECCeEEEEEEecCCCcc
Confidence 46789999999999987555655555443 5999999999999864 46666653
No 422
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=27.05 E-value=42 Score=31.91 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=26.3
Q ss_pred EEEEEeCCcc----------CCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVV----------SGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~----------s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|-|+||||=- |--=-|-...+|.+.|..+|++|+++--.
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6789999941 11112334456778888999999988544
No 423
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=26.74 E-value=3e+02 Score=26.50 Aligned_cols=28 Identities=14% Similarity=0.377 Sum_probs=19.5
Q ss_pred eEEEEEeccCCchhhHHH-HHHHHHHcCCceeE
Q 012331 298 VRIAMVGKYTGLSDAYLS-ILKALLHASVDLRK 329 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~S-I~~aL~~aG~~~~v 329 (466)
.+|.++| ..+ +=.| +.+.|...|+++.+
T Consensus 5 ~~i~~iG-iGg---~Gms~~A~~L~~~G~~V~~ 33 (326)
T 3eag_A 5 KHIHIIG-IGG---TFMGGLAAIAKEAGFEVSG 33 (326)
T ss_dssp CEEEEES-CCS---HHHHHHHHHHHHTTCEEEE
T ss_pred cEEEEEE-ECH---HHHHHHHHHHHhCCCEEEE
Confidence 4688887 433 4454 77888888888776
No 424
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=26.73 E-value=3.5e+02 Score=24.32 Aligned_cols=31 Identities=23% Similarity=0.376 Sum_probs=20.6
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.++|||++.+...+. ..++.+.+.++|+.-+
T Consensus 68 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~ 98 (292)
T 3k4h_A 68 RQIGGIILLYSREND------RIIQYLHEQNFPFVLI 98 (292)
T ss_dssp TCCCEEEESCCBTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHHCCCCEEEE
Confidence 479999997643221 3556667778888644
No 425
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=26.71 E-value=3.8e+02 Score=24.67 Aligned_cols=81 Identities=19% Similarity=0.059 Sum_probs=43.5
Q ss_pred CeEEEEEeccCCchhhH-----HHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEec
Q 012331 297 PVRIAMVGKYTGLSDAY-----LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 369 (466)
Q Consensus 297 ~v~IaIVgkY~g~~Day-----~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllP 369 (466)
+.+||++-.. ..+.| ..+.++++..|+.+.+ ..++. +++.-....+.+ .++|||++.
T Consensus 3 ~~~Igvi~~~--~~~~~~~~~~~gi~~~a~~~g~~~~~------~~~~~--------~~~~~~~~i~~~~~~~vdgiIi~ 66 (330)
T 3uug_A 3 KGSVGIAMPT--KSSARWIDDGNNIVKQLQEAGYKTDL------QYADD--------DIPNQLSQIENMVTKGVKVLVIA 66 (330)
T ss_dssp CCEEEEEECC--SSSTHHHHHHHHHHHHHHHTTCEEEE------EECTT--------CHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CcEEEEEeCC--CcchHHHHHHHHHHHHHHHcCCEEEE------eeCCC--------CHHHHHHHHHHHHHcCCCEEEEE
Confidence 4578888643 22233 3455667777776554 22221 111111111222 479999997
Q ss_pred CCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 370 GGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 370 GGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
+-.. ......++.+.+.++|+.-+
T Consensus 67 ~~~~----~~~~~~~~~~~~~giPvV~~ 90 (330)
T 3uug_A 67 SIDG----TTLSDVLKQAGEQGIKVIAY 90 (330)
T ss_dssp CSSG----GGGHHHHHHHHHTTCEEEEE
T ss_pred cCCc----hhHHHHHHHHHHCCCCEEEE
Confidence 6321 22345667777889998654
No 426
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=26.56 E-value=2.3e+02 Score=27.35 Aligned_cols=97 Identities=19% Similarity=0.199 Sum_probs=62.9
Q ss_pred EEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCCch
Q 012331 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 378 (466)
Q Consensus 299 ~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg~e 378 (466)
+|.+|+. . ..+...|.++-...|+.... =+|++- .+..... ..+..||.|||.. | .
T Consensus 72 ~vlfVgT--k-~~~q~~V~k~A~~~g~~~v~---~rwlgG-tLTN~~t-----------~~f~~PdllvV~D-p-----~ 127 (252)
T 3u5c_A 72 DVVAISS--R-TFGQRAVLKFAAHTGATPIA---GRFTPG-SFTNYIT-----------RSFKEPRLVIVTD-P-----R 127 (252)
T ss_dssp GEEEEEC--S-HHHHHHHHHHHHHSSCEEEE---SCCCTT-SSSCTTS-----------TTCCCCSEEEESC-T-----T
T ss_pred EEEEEeC--C-cHHHHHHHHHHHHhCCceec---CcccCC-cccChhh-----------hhccCCceEEEeC-C-----c
Confidence 5778873 2 22445677777777776543 357654 2322110 2356799999986 2 1
Q ss_pred hHHHHHHHHHHcCCcEEEeh--------------------HHHHHHHHHhccccccccCCC
Q 012331 379 GKILAAKYAREHRIPYLGIC--------------------LGMQVAVIEFARSVLNLRDAN 419 (466)
Q Consensus 379 G~i~aIk~are~~iPvLGIC--------------------LGmQllaia~Gr~v~klk~a~ 419 (466)
....++++|...++|+.|+| .-.+++.--+++.++.++..-
T Consensus 128 ~d~~ai~EA~~l~IP~Ial~DTn~~p~~VD~~IP~Ndds~~SI~Li~~~La~aVl~~rg~i 188 (252)
T 3u5c_A 128 SDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGAL 188 (252)
T ss_dssp TTHHHHHHHHTTTCCEEEEECTTCCCTTCSSEEECCTTSTTHHHHHHHHHHHHHHSSSSSC
T ss_pred cchHHHHHHHHcCCCEEEEEcCCCCcccCCEEEeCCCCCcchHHHHHHHHHHHHHHhcCCc
Confidence 23568889999999999999 244666667778787776554
No 427
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=26.55 E-value=1.6e+02 Score=26.97 Aligned_cols=31 Identities=19% Similarity=0.400 Sum_probs=19.9
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 65 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~i 95 (288)
T 3gv0_A 65 GSADGVIISKIEPND------PRVRFMTERNMPFVTH 95 (288)
T ss_dssp TCCSEEEEESCCTTC------HHHHHHHHTTCCEEEE
T ss_pred CCccEEEEecCCCCc------HHHHHHhhCCCCEEEE
Confidence 579999997632211 3455666778887654
No 428
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=26.54 E-value=59 Score=31.94 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=30.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
||.+|+++| +.|==.-+-.|+..|+++|++|+++--++
T Consensus 1 MrIl~~~~~---~~GH~~p~l~la~~L~~~Gh~V~~~~~~~ 38 (416)
T 1rrv_A 1 MRVLLSVCG---TRGDVEIGVALADRLKALGVQTRMCAPPA 38 (416)
T ss_dssp CEEEEEEES---CHHHHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CeEEEEecC---CCccHHHHHHHHHHHHHCCCeEEEEeCHH
Confidence 788888887 45555667789999999999999986554
No 429
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=26.53 E-value=1.3e+02 Score=27.25 Aligned_cols=30 Identities=10% Similarity=-0.066 Sum_probs=19.7
Q ss_pred CCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 362 ~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
++|||++.+...+ . ..++.+.+.++|+.-+
T Consensus 57 ~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~~ 86 (277)
T 3cs3_A 57 MVDGAIILDWTFP---T---KEIEKFAERGHSIVVL 86 (277)
T ss_dssp TCSEEEEECTTSC---H---HHHHHHHHTTCEEEES
T ss_pred cccEEEEecCCCC---H---HHHHHHHhcCCCEEEE
Confidence 8999999774221 1 3455666678898654
No 430
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=26.41 E-value=64 Score=30.16 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=24.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
+|-|+||||- |-+.+.+.+.|.++|++|..+-.+|
T Consensus 12 ~~~vlVTGat------G~iG~~l~~~L~~~G~~V~~~~r~~ 46 (321)
T 2pk3_A 12 SMRALITGVA------GFVGKYLANHLTEQNVEVFGTSRNN 46 (321)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred cceEEEECCC------ChHHHHHHHHHHHCCCEEEEEecCC
Confidence 3669999984 4455666677778899998865443
No 431
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=26.35 E-value=58 Score=30.10 Aligned_cols=34 Identities=21% Similarity=0.109 Sum_probs=22.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeecc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDP 41 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~-g~~v~~~K~Dp 41 (466)
|| |+||||- ..+|+ .+-+.|..+ |++|.++--+|
T Consensus 1 M~-ilVtGat-G~iG~-----~l~~~L~~~~g~~V~~~~R~~ 35 (289)
T 3e48_A 1 MN-IMLTGAT-GHLGT-----HITNQAIANHIDHFHIGVRNV 35 (289)
T ss_dssp CC-EEEETTT-SHHHH-----HHHHHHHHTTCTTEEEEESSG
T ss_pred CE-EEEEcCC-chHHH-----HHHHHHhhCCCCcEEEEECCH
Confidence 45 8999975 44554 444446666 99999886654
No 432
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=26.31 E-value=3.4e+02 Score=24.03 Aligned_cols=32 Identities=13% Similarity=0.293 Sum_probs=20.0
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.++|||++.+.... . . ..++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~-~-~---~~~~~~~~~~iPvV~~ 88 (272)
T 3o74_A 57 RRCDALFVASCLPP-E-D---DSYRELQDKGLPVIAI 88 (272)
T ss_dssp TTCSEEEECCCCCS-S-C---CHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCccc-c-H---HHHHHHHHcCCCEEEE
Confidence 47999999874322 1 1 2345566678888654
No 433
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=26.12 E-value=42 Score=29.53 Aligned_cols=23 Identities=35% Similarity=0.414 Sum_probs=16.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHH
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGV 25 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ 25 (466)
|+.|++||+ +|-||...+..|..
T Consensus 1 m~~i~i~G~--~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 1 MKRIGLTGN--IGCGKSTVAQMFRE 23 (204)
T ss_dssp CCEEEEEEC--TTSSHHHHHHHHHH
T ss_pred CeEEEEECC--CCcCHHHHHHHHHH
Confidence 678999998 77889765554444
No 434
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=25.86 E-value=2.4e+02 Score=25.16 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=19.8
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.++|||++.+...+ . ..++.+.+.++|+.-+
T Consensus 58 ~~vdgii~~~~~~~---~---~~~~~l~~~~iPvV~~ 88 (275)
T 3d8u_A 58 SRPAGVVLFGSEHS---Q---RTHQLLEASNTPVLEI 88 (275)
T ss_dssp SCCCCEEEESSCCC---H---HHHHHHHHHTCCEEEE
T ss_pred cCCCEEEEeCCCCC---H---HHHHHHHhCCCCEEEE
Confidence 46999998764321 1 3455566678998765
No 435
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Probab=25.71 E-value=74 Score=30.70 Aligned_cols=53 Identities=19% Similarity=0.246 Sum_probs=39.8
Q ss_pred HHHHHHHHCCCeeEEeeecccccCCCCCC-CccccceEEEccCCcc----ccCCCCcc
Q 012331 22 SIGVLLKACGLRVTCIKIDPYLNTDAGTM-SPFEHGEVFVLDDGGE----VDLDLGNY 74 (466)
Q Consensus 22 s~g~ll~~~g~~v~~~K~DpYln~d~gtm-sp~~hgEvfv~~dg~e----~dlDlg~y 74 (466)
-.+.+|++.||+|+.+.-=-|.+-+++.- .|..|==..|+-||.. +|.=+|.+
T Consensus 79 Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~~ 136 (278)
T 1w5r_A 79 LLGYVLEELGFEVERLSGRVVWMRADDAPLPAQTHNVLSVAVPGADGRYLVDVGFGGQ 136 (278)
T ss_dssp HHHHHHHHHTCEEEEEEEEECTTCCTTCCCCCEEEEEEEEECSSCSCCEEECSCSCTT
T ss_pred HHHHHHHHcCCeEEEEEEEEeeCCCCCCCCCCCccEEEEEEECCeEEEEEEecCCCcc
Confidence 46789999999999987655655554433 5999999999999854 46666653
No 436
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=25.60 E-value=3.7e+02 Score=24.13 Aligned_cols=82 Identities=12% Similarity=0.075 Sum_probs=41.7
Q ss_pred CCeEEEEEeccCCchh-----hHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEe
Q 012331 296 EPVRIAMVGKYTGLSD-----AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILV 368 (466)
Q Consensus 296 ~~v~IaIVgkY~g~~D-----ay~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIll 368 (466)
+..+||++-...+..+ ....+.++++..|+.+.+ .+.. .+++......+.+ .++||||+
T Consensus 18 ~~~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~~~~~------~~~~--------~~~~~~~~~~~~l~~~~vdgii~ 83 (296)
T 3brq_A 18 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLL------ADGK--------HSAEEERQAIQYLLDLRCDAIMI 83 (296)
T ss_dssp -CCEEEEEECGGGCC--CHHHHHHHHHHHHHHTTCEEEE------ECCT--------TSHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCceEEEEeCCcccCCchHHHHHHHHHHHHHHCCCEEEE------EeCC--------CCHHHHHHHHHHHHhcCCCEEEE
Confidence 3458888753200222 233456666777776543 2222 1111111122233 47999999
Q ss_pred cCCCCCCCchhHHHHHHHHHH-cCCcEEEe
Q 012331 369 PGGFGNRGVQGKILAAKYARE-HRIPYLGI 397 (466)
Q Consensus 369 PGGfG~rg~eG~i~aIk~are-~~iPvLGI 397 (466)
.+...+ . ..++.+.+ .++|+.-+
T Consensus 84 ~~~~~~---~---~~~~~l~~~~~iPvV~~ 107 (296)
T 3brq_A 84 YPRFLS---V---DEIDDIIDAHSQPIMVL 107 (296)
T ss_dssp ECSSSC---H---HHHHHHHHTCSSCEEEE
T ss_pred ecCCCC---h---HHHHHHHhcCCCCEEEE
Confidence 764221 1 34556667 78998765
No 437
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=25.60 E-value=66 Score=28.02 Aligned_cols=33 Identities=27% Similarity=0.304 Sum_probs=23.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|| |+||||- ++||+.+ .+.|. +|++|.+.-.++
T Consensus 4 M~-vlVtGas-g~iG~~~-----~~~l~-~g~~V~~~~r~~ 36 (202)
T 3d7l_A 4 MK-ILLIGAS-GTLGSAV-----KERLE-KKAEVITAGRHS 36 (202)
T ss_dssp CE-EEEETTT-SHHHHHH-----HHHHT-TTSEEEEEESSS
T ss_pred cE-EEEEcCC-cHHHHHH-----HHHHH-CCCeEEEEecCc
Confidence 45 8999984 6666654 44555 799999875554
No 438
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=25.58 E-value=1.9e+02 Score=26.76 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=21.6
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.++|||++.+...+ . ....++.+.+.++|+.-+
T Consensus 56 ~~vdgiIi~~~~~~-~---~~~~~~~~~~~~iPvV~~ 88 (313)
T 2h3h_A 56 EGVNGIAIAPSDPT-A---VIPTIKKALEMGIPVVTL 88 (313)
T ss_dssp TTCSEEEECCSSTT-T---THHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCChH-H---HHHHHHHHHHCCCeEEEe
Confidence 57999999764321 1 234556677788998765
No 439
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=25.35 E-value=68 Score=33.27 Aligned_cols=57 Identities=19% Similarity=0.303 Sum_probs=37.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln~d~gtmsp~~hgEvfv~~dg 64 (466)
+.|-||| +=||-.|++=|+.+|+..|++++.+ +-..+| ..|+..-....+++|.+=|
T Consensus 123 ~~IaVTG----TnGKTTTt~ml~~iL~~~g~~~~~~-~gg~~~-~~g~~~~~~~~d~~VlE~~ 179 (494)
T 4hv4_A 123 HGIAVAG----THGKTTTTAMLSSIYAEAGLDPTFV-NGGLVK-AAGTHARLGSSRYLIAEAD 179 (494)
T ss_dssp EEEEEEC----SSSHHHHHHHHHHHHHHTTCCCEEE-EEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEec----CCChHHHHHHHHHHHHhcCCCCEEE-ECCccc-ccccccccCCCcEEEEEcc
Confidence 4688888 5799999999999999999975432 111122 1232212234688888765
No 440
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=25.33 E-value=39 Score=29.92 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=26.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpYln 44 (466)
+.|.+||+ ||-||...+..|...+. .+..+-.|+|+-
T Consensus 22 ~~i~i~G~--~GsGKSTl~~~L~~~~~----~~~~i~~D~~~~ 58 (207)
T 2qt1_A 22 FIIGISGV--TNSGKTTLAKNLQKHLP----NCSVISQDDFFK 58 (207)
T ss_dssp EEEEEEES--TTSSHHHHHHHHHTTST----TEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHhcC----CcEEEeCCcccc
Confidence 57889997 57789877776665432 467777888764
No 441
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=25.29 E-value=56 Score=31.02 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=23.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.++||||-= +|||+.+ .+.|-++|++|.+.
T Consensus 32 k~~lVTGasg~~GIG~ai-----a~~la~~G~~V~~~ 63 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGI-----AKAAREAGAELAFT 63 (293)
T ss_dssp CEEEEECCCSSSSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHH-----HHHHHHCCCEEEEE
Confidence 7899999864 5788754 45677789988765
No 442
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=25.27 E-value=1.1e+02 Score=29.72 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=39.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe--eecccccCC--CCC---CCccccceEEEccCC
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI--KIDPYLNTD--AGT---MSPFEHGEVFVLDDG 64 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~--K~DpYln~d--~gt---msp~~hgEvfv~~dg 64 (466)
+.|-||| +=||=.|++=|+.+|+..|+++..+ .+-.-+|.. -|+ ..--+..+++|.+=+
T Consensus 109 ~~IaVTG----TnGKTTTt~ll~~iL~~~g~~~~~~~g~~~~n~~~~~~~~~p~~~~~~~~~~~~V~E~s 174 (326)
T 3eag_A 109 WVLGVAG----THGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPNSQSPFFVIEAD 174 (326)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEEECSSEETTSSCSEECCCCCSSCTTSCCCEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceEEecceeccCCcceecCCccccccCCCCCEEEEEcc
Confidence 5788898 5699999999999999999998642 122222221 121 111246789998843
No 443
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=24.78 E-value=38 Score=31.69 Aligned_cols=61 Identities=23% Similarity=0.288 Sum_probs=39.1
Q ss_pred cCCCEEEecCCCCCC-Cch-hHHHHHHHHHHcCCcEEEehHHHHHHHHHh----c-cccccccCCCCcc
Q 012331 361 KGADGILVPGGFGNR-GVQ-GKILAAKYAREHRIPYLGICLGMQVAVIEF----A-RSVLNLRDANSTE 422 (466)
Q Consensus 361 ~~~DGIllPGGfG~r-g~e-G~i~aIk~are~~iPvLGICLGmQllaia~----G-r~v~klk~a~s~E 422 (466)
.+.|+|.++-|||.- ++. |..-+--.+...++|+.||+- ++.++... + ..++-+-+|.+.|
T Consensus 55 ~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~iPl~gVst-L~a~a~~~~~~~~~~~v~~~~DARr~e 122 (213)
T 3r6m_A 55 QDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVST-LAAMAQASYRLHGATDVAVAIDARMSE 122 (213)
T ss_dssp TTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEH-HHHHHHHHHHHHCCSEEEEEECCSTTC
T ss_pred HHccEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEEEEcC-HHHHHHhhhhcCCCcEEEEEEECCCCC
Confidence 457999999999984 443 332222234567899999983 34443322 2 3566677888877
No 444
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=24.77 E-value=70 Score=27.76 Aligned_cols=28 Identities=11% Similarity=0.161 Sum_probs=17.8
Q ss_pred CCCCcEEEEeeCccccccCcc--hHHHHHHHh
Q 012331 137 EGPVDVCVIELGGTIGDIESM--PFIEALGQF 166 (466)
Q Consensus 137 ~~~~d~~i~EigGtvGdiEs~--pf~ea~rq~ 166 (466)
..+||+|++.+|.- |+... -|.+.+++|
T Consensus 72 ~~~pd~Vvi~~G~N--D~~~~~~~~~~~l~~i 101 (200)
T 4h08_A 72 NTKFDVIHFNNGLH--GFDYTEEEYDKSFPKL 101 (200)
T ss_dssp HSCCSEEEECCCSS--CTTSCHHHHHHHHHHH
T ss_pred cCCCCeEEEEeeeC--CCCCCHHHHHHHHHHH
Confidence 35799999999964 65322 245555554
No 445
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=24.71 E-value=47 Score=29.97 Aligned_cols=25 Identities=20% Similarity=0.493 Sum_probs=18.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL 32 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~ 32 (466)
|.|+||||- +|||+.++ +.|-++|+
T Consensus 3 k~vlITGas-ggiG~~la-----~~l~~~G~ 27 (244)
T 2bd0_A 3 HILLITGAG-KGIGRAIA-----LEFARAAR 27 (244)
T ss_dssp EEEEEETTT-SHHHHHHH-----HHHHHHTT
T ss_pred CEEEEECCC-ChHHHHHH-----HHHHHhcC
Confidence 789999984 77777554 44556687
No 446
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=24.63 E-value=49 Score=31.51 Aligned_cols=34 Identities=32% Similarity=0.383 Sum_probs=22.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
++.|.|||+ ||-||...|.-| +..|+.| +-.|.+
T Consensus 75 ~~iI~I~G~--~GSGKSTva~~L----a~lg~~~--id~D~~ 108 (281)
T 2f6r_A 75 LYVLGLTGI--SGSGKSSVAQRL----KNLGAYI--IDSDHL 108 (281)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHH----HHHTCEE--EEHHHH
T ss_pred CEEEEEECC--CCCCHHHHHHHH----HHCCCcE--EehhHH
Confidence 367999997 567887655544 4457643 555554
No 447
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=24.01 E-value=62 Score=30.72 Aligned_cols=34 Identities=26% Similarity=0.463 Sum_probs=25.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~Dp 41 (466)
|-|+||||- |-+.+.|...|.++|++|..+-.+|
T Consensus 20 ~~vlVtGat------G~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 20 HMILVTGSA------GRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp -CEEEETTT------SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEEECCC------ChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 569999974 5566677788888999999875543
No 448
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=23.97 E-value=3.5e+02 Score=24.16 Aligned_cols=77 Identities=13% Similarity=0.179 Sum_probs=40.2
Q ss_pred CeEEEEEeccCCchhhH-----HHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEec
Q 012331 297 PVRIAMVGKYTGLSDAY-----LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 369 (466)
Q Consensus 297 ~v~IaIVgkY~g~~Day-----~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllP 369 (466)
..+||++-.. ..+.| ..+.++++..|+.+.+ .++.. ++..-....+.+ .++||||+.
T Consensus 8 ~~~Ig~i~~~--~~~~~~~~~~~gi~~~~~~~g~~~~~------~~~~~--------~~~~~~~~~~~l~~~~~dgiIi~ 71 (277)
T 3e61_A 8 SKLIGLLLPD--MSNPFFTLIARGVEDVALAHGYQVLI------GNSDN--------DIKKAQGYLATFVSHNCTGMIST 71 (277)
T ss_dssp --CEEEEESC--TTSHHHHHHHHHHHHHHHHTTCCEEE------EECTT--------CHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEECC--CCCHHHHHHHHHHHHHHHHCCCEEEE------EeCCC--------CHHHHHHHHHHHHhCCCCEEEEe
Confidence 3468887532 22333 3455667777777654 33321 111111112222 579999997
Q ss_pred CCCCCCCchhHHHHHH-HHHHcCCcEEEe
Q 012331 370 GGFGNRGVQGKILAAK-YAREHRIPYLGI 397 (466)
Q Consensus 370 GGfG~rg~eG~i~aIk-~are~~iPvLGI 397 (466)
+ . + -..++ .+.+.++|+.-+
T Consensus 72 ~-~-~------~~~~~~~l~~~~iPvV~~ 92 (277)
T 3e61_A 72 A-F-N------ENIIENTLTDHHIPFVFI 92 (277)
T ss_dssp G-G-G------HHHHHHHHHHC-CCEEEG
T ss_pred c-C-C------hHHHHHHHHcCCCCEEEE
Confidence 7 1 1 23466 777889998755
No 449
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=23.77 E-value=72 Score=28.91 Aligned_cols=30 Identities=30% Similarity=0.463 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|.|+||||- ++||+. +.+.|.++|++|.+.
T Consensus 14 k~vlItGas-ggiG~~-----la~~l~~~G~~V~~~ 43 (260)
T 3awd_A 14 RVAIVTGGA-QNIGLA-----CVTALAEAGARVIIA 43 (260)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 666654 556677789988776
No 450
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=23.43 E-value=90 Score=24.25 Aligned_cols=33 Identities=30% Similarity=0.390 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC-CeeEEeeecc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG-LRVTCIKIDP 41 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g-~~v~~~K~Dp 41 (466)
+-|+|+|+ .++|. ++...|..+| ++|.+.-.+|
T Consensus 6 ~~v~I~G~--G~iG~-----~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGA--GKIGQ-----MIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECC--SHHHH-----HHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECC--CHHHH-----HHHHHHHhCCCceEEEEeCCH
Confidence 56888886 55554 5666788889 8888765543
No 451
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=23.38 E-value=1.2e+02 Score=30.07 Aligned_cols=76 Identities=9% Similarity=0.186 Sum_probs=47.2
Q ss_pred EEEEEeccCCchhhHHHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHccCCCEEEecCCCCCCCch
Q 012331 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 378 (466)
Q Consensus 299 ~IaIVgkY~g~~Day~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L~~~DGIllPGGfG~rg~e 378 (466)
+|.+|+. . ..+...|.++-.+.|+.... =+|++-. |..... ..+..+|.|||-.- .
T Consensus 73 ~ILfVgT--k-~~aq~~V~k~A~~~g~~yv~---~RWlgG~-LTN~~t-----------~~f~~PdlliV~Dp------~ 128 (295)
T 2zkq_b 73 DVSVISS--R-NTGQRAVLKFAAATGATPIA---GRFTPGT-FTNQIQ-----------AAFREPRLLVVTDP------R 128 (295)
T ss_dssp GEEEEEC--S-HHHHHHHHHHHHHHCCEEEE---SSCCCC--CCCTTC-----------SSCCCCSEEEESCT------T
T ss_pred eEEEEeC--c-HHHHHHHHHHHHHhCCceec---ceEeccc-ccCccc-----------ccccCCCeEEEeCC------C
Confidence 5778773 2 22445677777777776533 2566542 322110 13467899998862 1
Q ss_pred hHHHHHHHHHHcCCcEEEeh
Q 012331 379 GKILAAKYAREHRIPYLGIC 398 (466)
Q Consensus 379 G~i~aIk~are~~iPvLGIC 398 (466)
....++++|...+||+.|||
T Consensus 129 ~e~~AI~EA~~lgIPvIalv 148 (295)
T 2zkq_b 129 ADHQPLTEASYVNLPTIALC 148 (295)
T ss_dssp TTHHHHHHHHHHTCCEEEEE
T ss_pred cchhHHHHHHHhCCCEEEEe
Confidence 23468899999999999998
No 452
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=23.30 E-value=72 Score=29.64 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=24.0
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|-++|||+-= +|||+++ .+.|-+.|.+|.+.
T Consensus 7 K~alVTGaa~~~GIG~ai-----A~~la~~Ga~Vvi~ 38 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGV-----AKVLDQLGAKLVFT 38 (256)
T ss_dssp CEEEEECCCSTTCHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCCCCchHHHHH-----HHHHHHCCCEEEEE
Confidence 7899999753 4888765 56788899998775
No 453
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=23.17 E-value=4.2e+02 Score=24.01 Aligned_cols=79 Identities=13% Similarity=0.084 Sum_probs=40.7
Q ss_pred CeEEEEEeccCCchhhH-----HHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cCCCEEEec
Q 012331 297 PVRIAMVGKYTGLSDAY-----LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 369 (466)
Q Consensus 297 ~v~IaIVgkY~g~~Day-----~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~~DGIllP 369 (466)
..+||++-. ...+.| ..+.++++..|+.+.+ .++.. +++.-....+.+ .++|||++.
T Consensus 16 s~~Igvi~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~------~~~~~--------~~~~~~~~~~~l~~~~vdgiIi~ 79 (289)
T 2fep_A 16 TTTVGVIIP--DISSIFYSELARGIEDIATMYKYNIIL------SNSDQ--------NMEKELHLLNTMLGKQVDGIVFM 79 (289)
T ss_dssp CCEEEEEES--CTTSHHHHHHHHHHHHHHHHTTCEEEE------EECTT--------CHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCeEEEEeC--CCCCchHHHHHHHHHHHHHHcCCEEEE------EeCCC--------CHHHHHHHHHHHHhCCCCEEEEe
Confidence 457888753 222333 3355666777776543 22221 111111122222 479999997
Q ss_pred CCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 370 GGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 370 GGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
+.... -..++.+.+.++|+.-+
T Consensus 80 ~~~~~------~~~~~~l~~~~iPvV~~ 101 (289)
T 2fep_A 80 GGNIT------DEHVAEFKRSPVPIVLA 101 (289)
T ss_dssp CSCCC------HHHHHHHHHSSSCEEEE
T ss_pred cCCCC------HHHHHHHHhcCCCEEEE
Confidence 64211 12455556678888655
No 454
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=23.13 E-value=72 Score=30.14 Aligned_cols=35 Identities=23% Similarity=0.403 Sum_probs=26.7
Q ss_pred CEEEEEeCCccCCcchHHH--HHHHHHHHHHCCCeeEEeeec
Q 012331 1 MKYVLVTGGVVSGLGKGVT--ASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~--~as~g~ll~~~g~~v~~~K~D 40 (466)
||.+|+++| .| |.. +..+..-|+.+|+.|+++-.+
T Consensus 7 mkIl~~~~~----~g-G~~~~~~~la~~L~~~G~~V~v~~~~ 43 (364)
T 1f0k_A 7 KRLMVMAGG----TG-GHVFPGLAVAHHLMAQGWQVRWLGTA 43 (364)
T ss_dssp CEEEEECCS----SH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred cEEEEEeCC----Cc-cchhHHHHHHHHHHHcCCEEEEEecC
Confidence 588888865 34 543 458999999999999987654
No 455
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=23.09 E-value=50 Score=31.23 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=23.6
Q ss_pred EEEEEeCCc---------------cCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGV---------------VSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv---------------~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-++||||- -+++|. ++...|..+|++|+++-
T Consensus 9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~-----aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 9 LNIMITAGPTREPLDPVRYISDHSSGKMGF-----AIAAAAARRGANVTLVS 55 (226)
T ss_dssp CEEEEEESBCEEESSSSEEEEECCCSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCcccCceeeccCCCccHHHH-----HHHHHHHHCCCEEEEEE
Confidence 679999995 233554 45677888999999863
No 456
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=23.04 E-value=78 Score=29.87 Aligned_cols=28 Identities=43% Similarity=0.488 Sum_probs=19.8
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 4 i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|+||||- |-+.+.+.+.|.++|++|..+
T Consensus 3 vlVTGat------G~iG~~l~~~L~~~G~~V~~~ 30 (338)
T 1udb_A 3 VLVTGGS------GYIGSHTCVQLLQNGHDVIIL 30 (338)
T ss_dssp EEEETTT------SHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCC------CHHHHHHHHHHHHCCCEEEEE
Confidence 8999973 444455666677789988764
No 457
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=22.90 E-value=1.9e+02 Score=22.40 Aligned_cols=61 Identities=13% Similarity=0.201 Sum_probs=33.4
Q ss_pred cccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHHHHHHHh
Q 012331 87 NITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQF 166 (466)
Q Consensus 87 n~t~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs~pf~ea~rq~ 166 (466)
+....+.....+++. | | .|..... ..+.+..+. ...||++|+++.- .|..+ ++.++++
T Consensus 12 ~~~~~~~l~~~L~~~--g-~---~v~~~~~----~~~a~~~l~-------~~~~dlii~D~~l--~~~~g---~~~~~~l 69 (127)
T 3i42_A 12 YQAAAETFKELLEML--G-F---QADYVMS----GTDALHAMS-------TRGYDAVFIDLNL--PDTSG---LALVKQL 69 (127)
T ss_dssp CHHHHHHHHHHHHHT--T-E---EEEEESS----HHHHHHHHH-------HSCCSEEEEESBC--SSSBH---HHHHHHH
T ss_pred CHHHHHHHHHHHHHc--C-C---CEEEECC----HHHHHHHHH-------hcCCCEEEEeCCC--CCCCH---HHHHHHH
Confidence 344556677777654 2 3 5554443 333344443 2359999999742 34334 4555555
Q ss_pred hhh
Q 012331 167 SYR 169 (466)
Q Consensus 167 ~~~ 169 (466)
|..
T Consensus 70 ~~~ 72 (127)
T 3i42_A 70 RAL 72 (127)
T ss_dssp HHS
T ss_pred Hhh
Confidence 554
No 458
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=22.84 E-value=63 Score=31.83 Aligned_cols=35 Identities=14% Similarity=0.168 Sum_probs=27.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
||++|+|.|. .|==.-...|++-|+++|++|++.-
T Consensus 1 MrIli~~~gt---~Ghv~p~~~La~~L~~~Gh~V~v~~ 35 (404)
T 3h4t_A 1 MGVLITGCGS---RGDTEPLVALAARLRELGADARMCL 35 (404)
T ss_dssp -CEEEEEESS---HHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEeCCC---CccHHHHHHHHHHHHHCCCeEEEEe
Confidence 7899998774 3544557889999999999999964
No 459
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=22.81 E-value=58 Score=31.61 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=27.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
||++|+|.| +-|==..+..|+.-|+++|+.|++.--
T Consensus 16 MrIl~~~~~---~~gh~~~~~~La~~L~~~GheV~v~~~ 51 (398)
T 4fzr_A 16 MRILVIAGC---SEGFVMPLVPLSWALRAAGHEVLVAAS 51 (398)
T ss_dssp CEEEEECCS---SHHHHGGGHHHHHHHHHTTCEEEEEEE
T ss_pred eEEEEEcCC---CcchHHHHHHHHHHHHHCCCEEEEEcC
Confidence 789999876 333333457899999999999998754
No 460
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=22.79 E-value=64 Score=27.72 Aligned_cols=24 Identities=25% Similarity=0.336 Sum_probs=19.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHH
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLL 27 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll 27 (466)
+.|+++|. ||-||...+.-|+..|
T Consensus 6 ~~i~l~G~--~GsGKst~a~~La~~l 29 (185)
T 3trf_A 6 TNIYLIGL--MGAGKTSVGSQLAKLT 29 (185)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHh
Confidence 57899997 9999988777776655
No 461
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=22.65 E-value=79 Score=29.58 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|-|+||||- |-+.+.|...|.++|++|..+--+
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVTGGT------GFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC------cHHHHHHHHHHHhCCCEEEEEeCC
Confidence 569999974 566677778888889988876544
No 462
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=22.64 E-value=39 Score=31.20 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=24.3
Q ss_pred CE-EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 1 MK-YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 1 ~k-~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|| -|+||||- |-+.+.+...|.++|++|..+--
T Consensus 4 M~m~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 4 MKERVIITGAN------GQLGKQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp -CEEEEEESTT------SHHHHHHHHHSCTTTEEEEEECT
T ss_pred ceeEEEEECCC------CHHHHHHHHHHHhCCCEEEEecc
Confidence 45 69999974 55666777778888999888744
No 463
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=22.52 E-value=83 Score=32.13 Aligned_cols=45 Identities=22% Similarity=0.319 Sum_probs=31.4
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 012331 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (466)
Q Consensus 111 vqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGt-vGdiEs~pf~ea~rq~ 166 (466)
..++|+=-++|++.|++... ++|++|+ .||| +|+-.=.| ||++++
T Consensus 226 ~~iv~Dd~~~i~~~l~~a~~--------~~DlVit-tGG~s~g~~D~t~--~al~~~ 271 (402)
T 1uz5_A 226 MGVARDDKESLKALIEKAVN--------VGDVVVI-SGGASGGTKDLTA--SVIEEL 271 (402)
T ss_dssp EEEECSSHHHHHHHHHHHHH--------HCSEEEE-ECCC-----CHHH--HHHHHH
T ss_pred EEEeCCCHHHHHHHHHHHhh--------CCCEEEE-cCCCCCCCcccHH--HHHHhh
Confidence 35778878899999998863 4799877 8887 67654445 899887
No 464
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=22.51 E-value=89 Score=26.33 Aligned_cols=32 Identities=28% Similarity=0.343 Sum_probs=21.2
Q ss_pred CCCcEEEEeeCccccccCc------chHHHHHHHhhhhcC
Q 012331 138 GPVDVCVIELGGTIGDIES------MPFIEALGQFSYRVG 171 (466)
Q Consensus 138 ~~~d~~i~EigGtvGdiEs------~pf~ea~rq~~~~~g 171 (466)
..||+++|.+|+ .|+-. .-|.+.++++-..+.
T Consensus 66 ~~pd~vvi~~G~--ND~~~~~~~~~~~~~~~l~~~i~~~~ 103 (195)
T 1yzf_A 66 EKPDEVVIFFGA--NDASLDRNITVATFRENLETMIHEIG 103 (195)
T ss_dssp GCCSEEEEECCT--TTTCTTSCCCHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEEeec--cccCccCCCCHHHHHHHHHHHHHHhc
Confidence 579999999996 67651 235556666655554
No 465
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=22.41 E-value=62 Score=31.29 Aligned_cols=61 Identities=21% Similarity=0.357 Sum_probs=42.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeeccccc-----CCCCC----CCccccceEEEccCC
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKIDPYLN-----TDAGT----MSPFEHGEVFVLDDG 64 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~-~~g~~v~~~K~DpYln-----~d~gt----msp~~hgEvfv~~dg 64 (466)
+-++++|. +|.||=-.|.+|+..+. .+|++|..+-..-+++ .+.|. +.-+..-.|.+.||=
T Consensus 153 ~~lll~G~--~GtGKT~La~aia~~~~~~~g~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~lLiiDdi 223 (308)
T 2qgz_A 153 KGLYLYGD--MGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAIDVKNAISNGSVKEEIDAVKNVPVLILDDI 223 (308)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHHSCCCEEEEEHHHHHHHHHCCCC----CCTTHHHHTSSEEEEETC
T ss_pred ceEEEECC--CCCCHHHHHHHHHHHHHHhcCCcEEEEEHHHHHHHHHHHhccchHHHHHHHhcCCCEEEEcCC
Confidence 45788997 79999999999999999 9999998776654433 22332 222334467777763
No 466
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=22.40 E-value=88 Score=30.14 Aligned_cols=33 Identities=27% Similarity=0.280 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|-|+||||- |-+.+.+.+.|.++|++|.++-.+
T Consensus 25 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 25 NVALITGIT------GQDGSYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cEEEEECCC------chHHHHHHHHHHHCCCEEEEEECC
Confidence 679999974 444456666677789998876443
No 467
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=22.39 E-value=89 Score=29.64 Aligned_cols=34 Identities=38% Similarity=0.351 Sum_probs=24.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
||-|+||||- |-+.+.+.+.|.++|++|.++-.+
T Consensus 21 ~~~vlVTGat------G~iG~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 21 MKKVFITGIC------GQIGSHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp CCEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCc------cHHHHHHHHHHHHCCCEEEEEECC
Confidence 4569999974 445566667777889999887443
No 468
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=22.31 E-value=60 Score=31.37 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=26.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
||++|+|+|. -|==..+..|+.-|+++|+.|+++--
T Consensus 21 MrIl~~~~~~---~Gh~~~~~~la~~L~~~GheV~v~~~ 56 (412)
T 3otg_A 21 MRVLFASLGT---HGHTYPLLPLATAARAAGHEVTFATG 56 (412)
T ss_dssp CEEEEECCSS---HHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred eEEEEEcCCC---cccHHHHHHHHHHHHHCCCEEEEEcc
Confidence 7899999772 12112245789999999999999854
No 469
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=22.24 E-value=82 Score=28.28 Aligned_cols=32 Identities=41% Similarity=0.612 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.|+||||- ++||+.+ .+.|.++|++|.+.-.
T Consensus 8 k~vlITGas-ggiG~~~-----a~~l~~~G~~V~~~~r 39 (244)
T 3d3w_A 8 RRVLVTGAG-KGIGRGT-----VQALHATGARVVAVSR 39 (244)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred cEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999984 6666644 4567778999887643
No 470
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=22.19 E-value=2.2e+02 Score=26.12 Aligned_cols=31 Identities=16% Similarity=0.471 Sum_probs=20.9
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.++||||+.+...+. ..++.+.+.++|+.-+
T Consensus 64 ~~vdGiIi~~~~~~~------~~~~~l~~~~iPvV~~ 94 (294)
T 3qk7_A 64 RRVDALIVAHTQPED------FRLQYLQKQNFPFLAL 94 (294)
T ss_dssp TCCSEEEECSCCSSC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHhCCCCEEEE
Confidence 479999998753321 3456666778888654
No 471
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=22.10 E-value=24 Score=31.43 Aligned_cols=12 Identities=33% Similarity=0.518 Sum_probs=10.3
Q ss_pred CCCcEEEEeeCc
Q 012331 138 GPVDVCVIELGG 149 (466)
Q Consensus 138 ~~~d~~i~EigG 149 (466)
.+||+|+|.+|+
T Consensus 82 ~~pd~vvi~~G~ 93 (215)
T 2vpt_A 82 HNPDVVFLWIGG 93 (215)
T ss_dssp HCCSEEEEECCH
T ss_pred cCCCEEEEEccc
Confidence 368999999985
No 472
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=22.09 E-value=80 Score=28.23 Aligned_cols=32 Identities=38% Similarity=0.534 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.|+||||- ++||+. +.+.|.++|++|.+.-.
T Consensus 6 k~vlVtGas-ggiG~~-----~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 6 GAVLITGAS-RGIGEA-----TARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 679999985 667654 45566778999877543
No 473
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=22.08 E-value=81 Score=29.38 Aligned_cols=31 Identities=35% Similarity=0.279 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|-|+||||- |-+.+.+-+.|.++|++|...-
T Consensus 2 k~vlVTGat------G~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 2 GRVCVTGGT------GFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp CEEEEESTT------SHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCh------hHHHHHHHHHHHHCCCEEEEEE
Confidence 569999974 4444556666778899998653
No 474
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=22.01 E-value=89 Score=30.37 Aligned_cols=38 Identities=32% Similarity=0.475 Sum_probs=32.2
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 3 ~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
+|.+.|- ||-||=.+++.|+.+++..|.+|.+.-.|.|
T Consensus 104 vi~lvG~--nGsGKTTll~~Lagll~~~~g~V~l~g~D~~ 141 (304)
T 1rj9_A 104 VVLVVGV--NGVGKTTTIAKLGRYYQNLGKKVMFCAGDTF 141 (304)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHHHTTTCCEEEECCCCS
T ss_pred EEEEECC--CCCcHHHHHHHHHHHHHhcCCEEEEEeecCC
Confidence 6777763 9999999999999999998988888766654
No 475
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=21.98 E-value=75 Score=30.08 Aligned_cols=30 Identities=37% Similarity=0.414 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~ 37 (466)
|-|+||||- |-+.+.+.+.|.++|++|.++
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~ 32 (348)
T 1ek6_A 3 EKVLVTGGA------GYIGSHTVLELLEAGYLPVVI 32 (348)
T ss_dssp SEEEEETTT------SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCC------CHHHHHHHHHHHHCCCEEEEE
Confidence 569999974 445566666777789988776
No 476
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=21.94 E-value=77 Score=28.72 Aligned_cols=31 Identities=39% Similarity=0.538 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.|+||||- +|||+. +.+.|.++|++|.+.-
T Consensus 15 k~vlVTGas-~gIG~~-----~a~~l~~~G~~V~~~~ 45 (249)
T 3f9i_A 15 KTSLITGAS-SGIGSA-----IARLLHKLGSKVIISG 45 (249)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEc
Confidence 679999994 677754 5567778899988753
No 477
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=21.64 E-value=2.5e+02 Score=21.77 Aligned_cols=57 Identities=12% Similarity=0.173 Sum_probs=29.7
Q ss_pred chHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHHHHHHH
Q 012331 90 TGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQ 165 (466)
Q Consensus 90 ~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs~pf~ea~rq 165 (466)
......+.+++. |-.|.... ...+.+..+. ...||++|+++.- .|..+..+++.+|+
T Consensus 19 ~~~~l~~~L~~~------g~~v~~~~----~~~~a~~~l~-------~~~~dlvi~d~~l--~~~~g~~~~~~l~~ 75 (130)
T 3eod_A 19 FRSLLDSWFSSL------GATTVLAA----DGVDALELLG-------GFTPDLMICDIAM--PRMNGLKLLEHIRN 75 (130)
T ss_dssp HHHHHHHHHHHT------TCEEEEES----CHHHHHHHHT-------TCCCSEEEECCC-------CHHHHHHHHH
T ss_pred HHHHHHHHHHhC------CceEEEeC----CHHHHHHHHh-------cCCCCEEEEecCC--CCCCHHHHHHHHHh
Confidence 345566666654 33454433 3344555554 4579999999852 34445555554444
No 478
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=21.63 E-value=4e+02 Score=27.37 Aligned_cols=77 Identities=22% Similarity=0.281 Sum_probs=43.4
Q ss_pred eEEEEEeccCCchhhHHH-HHHHHHHcCCceeEEeEEEEeeCCC------cccccc----cCCchhhHHHHHHccCCCEE
Q 012331 298 VRIAMVGKYTGLSDAYLS-ILKALLHASVDLRKKLVIDWIPACD------LEDATE----KENPDAYKAAWKLLKGADGI 366 (466)
Q Consensus 298 v~IaIVgkY~g~~Day~S-I~~aL~~aG~~~~v~v~i~~i~s~~------l~~~~~----~~~p~~y~~~~~~L~~~DGI 366 (466)
.+|.++| ..+ +=.| +.+.|...|+.+.+. |... ++.... ..++ +.+.++|-|
T Consensus 23 ~~v~viG-iG~---sG~s~~A~~l~~~G~~V~~~------D~~~~~~~~~l~~~gi~~~~g~~~-------~~~~~~d~v 85 (494)
T 4hv4_A 23 RHIHFVG-IGG---AGMGGIAEVLANEGYQISGS------DLAPNSVTQHLTALGAQIYFHHRP-------ENVLDASVV 85 (494)
T ss_dssp CEEEEET-TTS---TTHHHHHHHHHHTTCEEEEE------CSSCCHHHHHHHHTTCEEESSCCG-------GGGTTCSEE
T ss_pred CEEEEEE-EcH---hhHHHHHHHHHhCCCeEEEE------ECCCCHHHHHHHHCCCEEECCCCH-------HHcCCCCEE
Confidence 3788887 423 3355 788899999888762 2211 000000 0011 345679999
Q ss_pred EecCCCCCCCchhHHHHHHHHHHcCCcEEE
Q 012331 367 LVPGGFGNRGVQGKILAAKYAREHRIPYLG 396 (466)
Q Consensus 367 llPGGfG~rg~eG~i~aIk~are~~iPvLG 396 (466)
|+++|..... ..+++|+++++|+++
T Consensus 86 V~Spgi~~~~-----p~~~~a~~~gi~v~~ 110 (494)
T 4hv4_A 86 VVSTAISADN-----PEIVAAREARIPVIR 110 (494)
T ss_dssp EECTTSCTTC-----HHHHHHHHTTCCEEE
T ss_pred EECCCCCCCC-----HHHHHHHHCCCCEEc
Confidence 9998754321 234556666777665
No 479
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=21.60 E-value=1.1e+02 Score=30.64 Aligned_cols=44 Identities=18% Similarity=0.196 Sum_probs=32.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc---ccCCCCCCCc
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY---LNTDAGTMSP 52 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY---ln~d~gtmsp 52 (466)
+.|+|+|+ ||-||-..|..|...| | +.++-.|-| -..|-||-.|
T Consensus 8 ~lI~I~Gp--tgSGKTtla~~La~~l---~--~~iis~Ds~qvYr~~~i~Takp 54 (340)
T 3d3q_A 8 FLIVIVGP--TASGKTELSIEVAKKF---N--GEIISGDSMQVYQGMDIGTAKV 54 (340)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHT---T--EEEEECCSSTTBTTCCTTTTCC
T ss_pred ceEEEECC--CcCcHHHHHHHHHHHc---C--CceeccccccccccccccccCC
Confidence 37889997 6778988877776654 2 678888884 6677777554
No 480
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=21.49 E-value=65 Score=30.70 Aligned_cols=59 Identities=14% Similarity=0.027 Sum_probs=39.0
Q ss_pred HHHHHHhhhhcCCCCEEEEEee-eeeeecCCCccccCchhhhHHHhhcCCCcccEEEEecCC
Q 012331 160 IEALGQFSYRVGPGNFCLIHVS-LVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTV 220 (466)
Q Consensus 160 ~ea~rq~~~~~g~~n~~~ih~t-~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~~ 220 (466)
+.-+|+++...+.++++|.-=+ .+||...+.|.=..-+...++.|++.| +|++|+-|..
T Consensus 25 ltv~~~i~~~~P~~~~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g--~d~iviaCNT 84 (273)
T 2oho_A 25 LTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQN--VKMIVFACNT 84 (273)
T ss_dssp HHHHHHHHHHCTTCCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHHTTT--CSEEEECCHH
T ss_pred HHHHHHHHHHCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC--CCEEEEeCch
Confidence 3444555555777887775544 689876555555556677788888877 5777776643
No 481
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=21.47 E-value=93 Score=30.56 Aligned_cols=39 Identities=21% Similarity=0.236 Sum_probs=29.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~DpY 42 (466)
||.+|+++|. .|==.-+-.|++.|+++|++|+++--+++
T Consensus 1 M~Il~~~~~~---~GHv~P~l~la~~L~~~Gh~V~~~~~~~~ 39 (415)
T 1iir_A 1 MRVLLATCGS---RGDTEPLVALAVRVRDLGADVRMCAPPDC 39 (415)
T ss_dssp CEEEEECCSC---HHHHHHHHHHHHHHHHTTCEEEEEECGGG
T ss_pred CeEEEEcCCC---chhHHHHHHHHHHHHHCCCeEEEEcCHHH
Confidence 7888888772 34435566789999999999999876653
No 482
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=21.39 E-value=91 Score=30.08 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|-|+||||- |-+.+.+.+.|.++|++|.++--+
T Consensus 29 k~vlVtGat------G~IG~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGIT------GQDGSYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEEcCC------chHHHHHHHHHHHCCCEEEEEecC
Confidence 679999973 344455666677789998876443
No 483
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=21.35 E-value=82 Score=26.99 Aligned_cols=41 Identities=22% Similarity=0.158 Sum_probs=25.0
Q ss_pred CCcEEEEeeCccccccCc----chHHHHHHHhhhhcCCCCEEEEEee
Q 012331 139 PVDVCVIELGGTIGDIES----MPFIEALGQFSYRVGPGNFCLIHVS 181 (466)
Q Consensus 139 ~~d~~i~EigGtvGdiEs----~pf~ea~rq~~~~~g~~n~~~ih~t 181 (466)
+||+|+|.+|. .|+-. .-|.+.+++|-..+...+.-.|-++
T Consensus 62 ~pd~Vii~~G~--ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 62 QPRWVLVELGG--NDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp CCSEEEEECCT--TTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEEeec--cccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 58999999995 57632 2266777766665543343333333
No 484
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=21.35 E-value=97 Score=29.39 Aligned_cols=33 Identities=24% Similarity=0.097 Sum_probs=25.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|-|+||||- |-+.+.|...|.++|++|..+-.+
T Consensus 26 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 26 KTWLITGVA------GFIGSNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEECCC------cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999974 566677778888899999887543
No 485
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=21.34 E-value=2.7e+02 Score=25.22 Aligned_cols=32 Identities=3% Similarity=0.093 Sum_probs=17.8
Q ss_pred CCeEEEEEeccCCchhhH-----HHHHHHHHHcCCceeE
Q 012331 296 EPVRIAMVGKYTGLSDAY-----LSILKALLHASVDLRK 329 (466)
Q Consensus 296 ~~v~IaIVgkY~g~~Day-----~SI~~aL~~aG~~~~v 329 (466)
+..+||++-.. ..+.| ..+.++++..|+.+.+
T Consensus 7 ~~~~Igvv~~~--~~~~~~~~~~~gi~~~a~~~g~~~~~ 43 (291)
T 3egc_A 7 RSNVVGLIVSD--IENVFFAEVASGVESEARHKGYSVLL 43 (291)
T ss_dssp CCCEEEEEESC--TTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEEECC--CcchHHHHHHHHHHHHHHHCCCEEEE
Confidence 34578887532 22333 3455666677766544
No 486
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=21.28 E-value=43 Score=30.48 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=20.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
|.++||||- +|||+.++- .|.. |++|.+.-
T Consensus 6 k~vlITGas-~gIG~~~a~-----~l~~-g~~v~~~~ 35 (245)
T 3e9n_A 6 KIAVVTGAT-GGMGIEIVK-----DLSR-DHIVYALG 35 (245)
T ss_dssp CEEEEESTT-SHHHHHHHH-----HHTT-TSEEEEEE
T ss_pred CEEEEEcCC-CHHHHHHHH-----HHhC-CCeEEEEe
Confidence 679999984 788876543 3433 88877653
No 487
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=21.26 E-value=98 Score=29.72 Aligned_cols=37 Identities=14% Similarity=0.245 Sum_probs=27.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
||.+|+++| +-|==..+..|+.-|+++|++|+++=-+
T Consensus 1 MrIl~~~~~---~~Gh~~p~~~la~~L~~~Gh~V~~~~~~ 37 (384)
T 2p6p_A 1 MRILFVAAG---SPATVFALAPLATAARNAGHQVVMAANQ 37 (384)
T ss_dssp CEEEEECCS---SHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CEEEEEeCC---ccchHhHHHHHHHHHHHCCCEEEEEeCH
Confidence 788888775 2333345567999999999999998543
No 488
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=21.25 E-value=70 Score=30.80 Aligned_cols=35 Identities=17% Similarity=0.065 Sum_probs=26.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K 38 (466)
||..|++.| +-|-=.-+..|..-|+++|+.|++.-
T Consensus 2 MrIl~~~~~---~~gh~~~~~~la~~L~~~GheV~v~~ 36 (391)
T 3tsa_A 2 MRVLVVPLP---YPTHLMAMVPLCWALQASGHEVLIAA 36 (391)
T ss_dssp CEEEEECCS---CHHHHHTTHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEEcCC---CcchhhhHHHHHHHHHHCCCEEEEec
Confidence 799999876 23322335678999999999999864
No 489
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=21.20 E-value=47 Score=35.55 Aligned_cols=32 Identities=28% Similarity=0.526 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|.++||||- ||||+. +.+.|-++|.+|.+.-.
T Consensus 20 k~~lVTGas-~GIG~a-----iA~~La~~Ga~Vv~~~r 51 (613)
T 3oml_A 20 RVAVVTGAG-AGLGRE-----YALLFAERGAKVVVNDL 51 (613)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEC--
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 679999986 778775 45667788999987633
No 490
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=21.20 E-value=90 Score=28.92 Aligned_cols=33 Identities=30% Similarity=0.426 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~D 40 (466)
|-|+||||- |-+.+.|...|.++|++|..+--+
T Consensus 8 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 8 HRILITGGA------GFIGGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEECCC------ChHHHHHHHHHHHCCCEEEEEecC
Confidence 569999974 556667777888889999887444
No 491
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=21.19 E-value=94 Score=29.60 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=23.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
+|-|+||||- |-+.+.+...|.++|++|..+-.
T Consensus 27 ~~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLITGVA------GFIGSNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp CCEEEEETTT------SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEECCC------cHHHHHHHHHHHHCCCEEEEEeC
Confidence 3569999973 44455666677778998887644
No 492
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=21.18 E-value=4.9e+02 Score=24.16 Aligned_cols=81 Identities=10% Similarity=-0.018 Sum_probs=42.9
Q ss_pred CeEEEEEeccCCchhhH-----HHHHHHHHHcCCceeEEeEEEEeeCCCcccccccCCchhhHHHHHHc--cC--CCEEE
Q 012331 297 PVRIAMVGKYTGLSDAY-----LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KG--ADGIL 367 (466)
Q Consensus 297 ~v~IaIVgkY~g~~Day-----~SI~~aL~~aG~~~~v~v~i~~i~s~~l~~~~~~~~p~~y~~~~~~L--~~--~DGIl 367 (466)
..+||++-. ...+.| ..+.++++..|+.+.+ .++.. +++.-....+.+ .+ +||||
T Consensus 5 s~~Igvi~~--~~~~~~~~~~~~gi~~~a~~~g~~l~~------~~~~~--------~~~~~~~~i~~l~~~~~~vdgiI 68 (332)
T 2rjo_A 5 QTTLACSFR--SLTNPYYTAFNKGAQSFAKSVGLPYVP------LTTEG--------SSEKGIADIRALLQKTGGNLVLN 68 (332)
T ss_dssp CCEEEEEES--CTTSHHHHHHHHHHHHHHHHHTCCEEE------EECTT--------CHHHHHHHHHHHHHHTTTCEEEE
T ss_pred ccEEEEEec--CCCcHHHHHHHHHHHHHHHHcCCEEEE------ecCCC--------CHHHHHHHHHHHHHCCCCCCEEE
Confidence 457888853 222333 3455667777776643 23321 111111112222 46 99999
Q ss_pred ecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 368 VPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 368 lPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
+.+... ......++.+.+.++|+.-+
T Consensus 69 i~~~~~----~~~~~~~~~~~~~~iPvV~~ 94 (332)
T 2rjo_A 69 VDPNDS----ADARVIVEACSKAGAYVTTI 94 (332)
T ss_dssp ECCSSH----HHHHHHHHHHHHHTCEEEEE
T ss_pred EeCCCH----HHHHHHHHHHHHCCCeEEEE
Confidence 976321 12234566777778998765
No 493
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=21.15 E-value=2.8e+02 Score=25.69 Aligned_cols=142 Identities=15% Similarity=0.267 Sum_probs=76.4
Q ss_pred chHhhHHHHhhhhcCCCCCCeeEEcccchH-HHHHHHHHHhcccCC---CC-----------------CCCCcEEEEeeC
Q 012331 90 TGKIYQSVIDKERKGDYLGKTVQVVPHITD-EIQDWIERVAMIPVD---GK-----------------EGPVDVCVIELG 148 (466)
Q Consensus 90 ~gkiy~~vi~ker~g~ylg~tvqviPHit~-ei~~~i~~~~~~pvd---~~-----------------~~~~d~~i~Eig 148 (466)
+|.-++.+|++-+.|+..+.-+=||..-.| .++++-++. .+|+- .. ..+||++++=
T Consensus 12 ~Gsnl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~-gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~a-- 88 (211)
T 3p9x_A 12 SGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVH-EIPVCALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLA-- 88 (211)
T ss_dssp TCHHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTT-TCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEES--
T ss_pred CchHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHc-CCCEEEeChhhcCchhhhHHHHHHHHHhcCCCEEEEe--
Confidence 356678888888888776655555543211 233333322 34431 00 2367877652
Q ss_pred ccccccCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCchhhhHHHhhcCCCcccEEEEecC-CCCCcchh
Q 012331 149 GTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRST-VALDDNVK 227 (466)
Q Consensus 149 GtvGdiEs~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~LrS~GI~pd~lV~Rs~-~~l~s~~r 227 (466)
| -+-|=+..|+++.+ ..++.||-+|+|.... -.|.|.++.+ |-.--|+=+.-- ..++.-
T Consensus 89 g-y~~Il~~~~l~~~~--------~~~iNiHpSLLP~yrG-----~~pi~~Ai~~----G~~~tGvTvh~v~~~~D~G-- 148 (211)
T 3p9x_A 89 G-YMRLVGPTLLGAYE--------GRIVNIHPSLLPAFPG-----LHAIEQAIRA----NVKVTGVTIHYVDEGMDTG-- 148 (211)
T ss_dssp S-CCSCCCHHHHHHHT--------TSEEEEESSCTTSSCS-----SCHHHHHHHT----TCSEEEEEEEECCSSSSCS--
T ss_pred C-chhhcCHHHHhhcc--------CCeEEECCccCCCCCC-----ccHHHHHHHc----CCCeEEEEEEEEcCCCCCC--
Confidence 1 24555556776543 3599999999998854 4688888753 444444333221 112211
Q ss_pred cccCccCCCCCCCeeecCCCCccchhhHHHHHcc
Q 012331 228 GKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQK 261 (466)
Q Consensus 228 ~KisL~~~l~~~~Vi~i~dVdTrY~lpl~LreqG 261 (466)
.+-....+.+..-||.-.|-..+.+.+
T Consensus 149 -------~Ii~Q~~v~I~~~dt~~~L~~rl~~~~ 175 (211)
T 3p9x_A 149 -------PIIAQEAVSIEEEDTLETLTTKIQAVE 175 (211)
T ss_dssp -------CEEEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred -------CEEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 111122345555677666666666544
No 494
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=21.09 E-value=3.3e+02 Score=25.09 Aligned_cols=33 Identities=9% Similarity=-0.045 Sum_probs=19.8
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEeh
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGIC 398 (466)
.++|+||.|.+. .....++..+.+.++|++.+.
T Consensus 68 ~~v~~iig~~~s-----~~~~~~~~~~~~~~ip~v~~~ 100 (346)
T 1usg_A 68 DGIKYVIGHLCS-----SSTQPASDIYEDEGILMISPG 100 (346)
T ss_dssp TTCCEEECCSSH-----HHHHHHHHHHHHHTCEEEECC
T ss_pred CCCCEEEcCCCc-----HHHHHHHHHHHHCCCeEEeeC
Confidence 479999844321 112334455666789998764
No 495
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=21.05 E-value=77 Score=27.83 Aligned_cols=27 Identities=37% Similarity=0.444 Sum_probs=17.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCe
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLR 33 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~ 33 (466)
|+.|.+||+ +|-||..++ ++|...|+.
T Consensus 2 ~~~i~l~G~--~GsGKST~~----~~La~lg~~ 28 (206)
T 1jjv_A 2 TYIVGLTGG--IGSGKTTIA----NLFTDLGVP 28 (206)
T ss_dssp CEEEEEECS--TTSCHHHHH----HHHHTTTCC
T ss_pred CcEEEEECC--CCCCHHHHH----HHHHHCCCc
Confidence 367899998 677896554 555445643
No 496
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=21.03 E-value=80 Score=26.12 Aligned_cols=27 Identities=41% Similarity=0.551 Sum_probs=19.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRV 34 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v 34 (466)
++|+++|. +|-||...|.-| +..|+.+
T Consensus 2 ~~I~l~G~--~GsGKsT~a~~L----~~~g~~~ 28 (179)
T 3lw7_A 2 KVILITGM--PGSGKSEFAKLL----KERGAKV 28 (179)
T ss_dssp CEEEEECC--TTSCHHHHHHHH----HHTTCEE
T ss_pred cEEEEECC--CCCCHHHHHHHH----HHCCCcE
Confidence 47889986 788897766544 7777764
No 497
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=20.91 E-value=88 Score=29.70 Aligned_cols=32 Identities=34% Similarity=0.457 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 012331 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (466)
Q Consensus 2 k~i~vtggv~s~~gkgi~~as~g~ll~~~g~~v~~~K~ 39 (466)
|-|+||||- |-+.+.|.+.|.++|++|..+-.
T Consensus 28 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 28 KRILITGGA------GFVGSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEcCc------cHHHHHHHHHHHHCCCEEEEEeC
Confidence 569999973 55566777778888999988643
No 498
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.90 E-value=1.6e+02 Score=23.37 Aligned_cols=60 Identities=13% Similarity=0.171 Sum_probs=34.1
Q ss_pred cccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHHHHHHHh
Q 012331 87 NITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQF 166 (466)
Q Consensus 87 n~t~gkiy~~vi~ker~g~ylg~tvqviPHit~ei~~~i~~~~~~pvd~~~~~~d~~i~EigGtvGdiEs~pf~ea~rq~ 166 (466)
+....+.+...+++. |-.|..... ..+.+..+. ...||++|+++ ..|..+ +|.++++
T Consensus 13 ~~~~~~~l~~~L~~~------g~~v~~~~~----~~~a~~~l~-------~~~~dlvi~d~---~~~~~g---~~~~~~l 69 (142)
T 2qxy_A 13 SRITFLAVKNALEKD------GFNVIWAKN----EQEAFTFLR-------REKIDLVFVDV---FEGEES---LNLIRRI 69 (142)
T ss_dssp CHHHHHHHHHHHGGG------TCEEEEESS----HHHHHHHHT-------TSCCSEEEEEC---TTTHHH---HHHHHHH
T ss_pred CHHHHHHHHHHHHhC------CCEEEEECC----HHHHHHHHh-------ccCCCEEEEeC---CCCCcH---HHHHHHH
Confidence 344556677777642 334554333 334444443 34799999998 445444 4566666
Q ss_pred hhh
Q 012331 167 SYR 169 (466)
Q Consensus 167 ~~~ 169 (466)
+..
T Consensus 70 ~~~ 72 (142)
T 2qxy_A 70 REE 72 (142)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 499
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=20.85 E-value=4.6e+02 Score=23.54 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=21.1
Q ss_pred cCCCEEEecCCCCCCCchhHHHHHHHHHHcCCcEEEe
Q 012331 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (466)
Q Consensus 361 ~~~DGIllPGGfG~rg~eG~i~aIk~are~~iPvLGI 397 (466)
.++|||++.+...+ . ....++.+.+.++|+.-+
T Consensus 57 ~~vdgiI~~~~~~~-~---~~~~~~~~~~~~iPvV~~ 89 (290)
T 2fn9_A 57 AGYDAIIFNPTDAD-G---SIANVKRAKEAGIPVFCV 89 (290)
T ss_dssp TTCSEEEECCSCTT-T---THHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCChH-H---HHHHHHHHHHCCCeEEEE
Confidence 47999999764321 1 123456667788998654
No 500
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=20.77 E-value=74 Score=27.11 Aligned_cols=25 Identities=36% Similarity=0.514 Sum_probs=18.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 012331 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (466)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~as~g~ll 27 (466)
+++|+++|+ +|-||...|..|...|
T Consensus 6 ~~~I~l~G~--~GsGKsT~~~~L~~~l 30 (194)
T 1qf9_A 6 PNVVFVLGG--PGSGKGTQCANIVRDF 30 (194)
T ss_dssp CEEEEEEES--TTSSHHHHHHHHHHHH
T ss_pred CcEEEEECC--CCCCHHHHHHHHHHHh
Confidence 368999997 6789987776665543
Done!