Query 012333
Match_columns 466
No_of_seqs 151 out of 1357
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 01:32:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012333.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012333hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15493 5-methylthioadenosine 100.0 2.4E-57 5.2E-62 440.7 46.6 426 19-464 1-431 (435)
2 PRK06687 chlorohydrolase; Vali 100.0 7.4E-56 1.6E-60 430.6 43.5 412 21-451 2-418 (419)
3 PRK09045 N-ethylammeline chlor 100.0 6.5E-55 1.4E-59 426.3 45.9 429 17-463 5-435 (443)
4 PRK07228 N-ethylammeline chlor 100.0 1.3E-54 2.9E-59 425.5 45.9 430 19-463 1-434 (445)
5 PRK07203 putative chlorohydrol 100.0 5.5E-54 1.2E-58 419.7 44.9 422 21-464 2-436 (442)
6 TIGR03314 Se_ssnA putative sel 100.0 5.2E-54 1.1E-58 418.1 43.5 422 21-464 1-435 (441)
7 PRK12393 amidohydrolase; Provi 100.0 5.1E-53 1.1E-57 412.9 46.2 431 18-464 1-450 (457)
8 PRK08204 hypothetical protein; 100.0 4.2E-53 9.2E-58 415.7 44.2 426 18-463 1-437 (449)
9 PRK06038 N-ethylammeline chlor 100.0 1.2E-52 2.6E-57 408.0 46.5 420 18-463 1-421 (430)
10 PRK06380 metal-dependent hydro 100.0 2.1E-52 4.5E-57 406.7 45.4 410 19-457 1-414 (418)
11 PRK08393 N-ethylammeline chlor 100.0 3.1E-52 6.6E-57 404.8 46.3 421 19-465 1-422 (424)
12 PRK08203 hydroxydechloroatrazi 100.0 3E-52 6.4E-57 408.9 44.6 428 21-464 4-445 (451)
13 PRK06151 N-ethylammeline chlor 100.0 1.6E-51 3.4E-56 405.8 43.1 423 20-463 2-458 (488)
14 cd01298 ATZ_TRZ_like TRZ/ATZ f 100.0 1.5E-49 3.2E-54 388.4 44.1 410 21-448 1-411 (411)
15 PRK09228 guanine deaminase; Pr 100.0 6.5E-50 1.4E-54 388.0 40.3 409 19-444 2-432 (433)
16 cd01303 GDEase Guanine deamina 100.0 1.4E-49 3.1E-54 385.9 39.7 402 28-438 14-429 (429)
17 PRK09229 N-formimino-L-glutama 100.0 6.3E-49 1.4E-53 384.8 35.8 418 19-463 3-450 (456)
18 TIGR02967 guan_deamin guanine 100.0 1.4E-47 3.1E-52 371.0 40.5 385 37-438 3-401 (401)
19 TIGR02022 hutF formiminoglutam 100.0 2E-47 4.4E-52 372.9 39.4 414 23-462 6-449 (455)
20 PRK08418 chlorohydrolase; Prov 100.0 3.7E-47 8E-52 365.5 38.3 392 21-442 2-408 (408)
21 cd01313 Met_dep_hydrolase_E Me 100.0 6.9E-47 1.5E-51 366.0 35.5 384 36-439 6-418 (418)
22 COG0402 SsnA Cytosine deaminas 100.0 1.9E-46 4.1E-51 363.6 37.7 408 19-448 2-414 (421)
23 KOG3968 Atrazine chlorohydrola 100.0 3.4E-47 7.4E-52 340.5 27.3 413 22-443 8-438 (439)
24 cd01312 Met_dep_hydrolase_D Me 100.0 3.1E-45 6.7E-50 348.6 35.0 364 48-439 1-381 (381)
25 PRK07213 chlorohydrolase; Prov 100.0 7.4E-44 1.6E-48 340.2 35.5 367 21-440 2-375 (375)
26 PRK09356 imidazolonepropionase 100.0 5.4E-41 1.2E-45 326.1 33.2 380 17-443 1-406 (406)
27 cd01293 Bact_CD Bacterial cyto 100.0 4.1E-39 8.9E-44 313.5 29.9 368 22-441 1-398 (398)
28 PRK09230 cytosine deaminase; P 100.0 1.8E-38 3.8E-43 306.8 33.5 372 18-444 3-407 (426)
29 PLN02942 dihydropyrimidinase 100.0 1.6E-38 3.4E-43 312.7 31.7 388 17-458 3-458 (486)
30 TIGR01224 hutI imidazoloneprop 100.0 1.8E-38 3.9E-43 305.5 29.9 352 39-440 2-377 (377)
31 COG1574 Predicted metal-depend 100.0 8.1E-38 1.8E-42 301.5 32.6 207 217-444 315-534 (535)
32 cd01314 D-HYD D-hydantoinases 100.0 2.1E-38 4.5E-43 311.5 27.5 375 21-449 1-442 (447)
33 TIGR02033 D-hydantoinase D-hyd 100.0 5.8E-38 1.3E-42 309.6 27.3 380 21-457 1-453 (454)
34 PRK14085 imidazolonepropionase 100.0 5.7E-37 1.2E-41 294.1 32.5 344 19-408 1-363 (382)
35 PRK08323 phenylhydantoinase; V 100.0 6.6E-38 1.4E-42 309.2 24.7 378 19-458 1-452 (459)
36 PRK07572 cytosine deaminase; V 100.0 1E-36 2.3E-41 296.0 32.2 370 19-445 2-404 (426)
37 PRK12394 putative metallo-depe 100.0 3.9E-36 8.4E-41 287.8 32.5 356 18-445 2-377 (379)
38 cd01297 D-aminoacylase D-amino 100.0 4.1E-36 8.8E-41 290.9 30.7 361 20-453 1-414 (415)
39 cd01296 Imidazolone-5PH Imidaz 100.0 2.9E-36 6.3E-41 289.7 29.0 350 43-438 1-371 (371)
40 PRK05985 cytosine deaminase; P 100.0 2.4E-35 5.2E-40 284.2 29.9 369 18-445 1-391 (391)
41 COG1228 HutI Imidazolonepropio 100.0 1.7E-35 3.6E-40 279.7 27.1 372 19-446 10-405 (406)
42 PRK07583 cytosine deaminase-li 100.0 3.2E-33 6.9E-38 272.4 33.7 379 16-445 8-425 (438)
43 PLN02795 allantoinase 100.0 9.5E-34 2.1E-38 278.5 28.1 383 16-455 41-501 (505)
44 PRK13309 ureC urease subunit a 100.0 6.6E-33 1.4E-37 267.6 30.1 340 18-447 67-466 (572)
45 PRK13404 dihydropyrimidinase; 100.0 1.4E-33 3E-38 276.4 25.5 383 18-458 3-461 (477)
46 TIGR03178 allantoinase allanto 100.0 9.1E-33 2E-37 270.1 31.0 372 20-455 1-441 (443)
47 TIGR01975 isoAsp_dipep isoaspa 100.0 2.8E-32 6.2E-37 257.8 32.5 338 21-448 2-383 (389)
48 cd01315 L-HYD_ALN L-Hydantoina 100.0 1.3E-32 2.9E-37 270.3 30.6 378 20-456 1-446 (447)
49 PRK06189 allantoinase; Provisi 100.0 1.1E-32 2.5E-37 269.5 29.7 378 17-458 1-447 (451)
50 PRK09357 pyrC dihydroorotase; 100.0 9E-33 2E-37 269.4 28.3 361 20-444 2-423 (423)
51 PRK10657 isoaspartyl dipeptida 100.0 3.1E-32 6.8E-37 263.1 30.9 342 19-449 1-383 (388)
52 PRK07575 dihydroorotase; Provi 100.0 4.5E-33 9.8E-38 270.7 22.8 368 17-456 1-434 (438)
53 PRK09236 dihydroorotase; Revie 100.0 1E-32 2.3E-37 269.2 25.4 359 18-457 1-441 (444)
54 PRK13206 ureC urease subunit a 100.0 1.1E-31 2.3E-36 257.7 30.9 331 17-444 69-463 (573)
55 PRK09061 D-glutamate deacylase 100.0 2.8E-31 6E-36 261.3 34.0 380 16-458 16-506 (509)
56 PRK06846 putative deaminase; V 100.0 8E-32 1.7E-36 260.8 29.0 355 39-444 30-406 (410)
57 PRK13207 ureC urease subunit a 100.0 3.4E-31 7.4E-36 255.0 32.2 333 17-447 65-462 (568)
58 PRK15446 phosphonate metabolis 100.0 2.4E-31 5.2E-36 253.3 30.6 329 18-444 1-382 (383)
59 PRK09237 dihydroorotase; Provi 100.0 5.9E-31 1.3E-35 252.8 33.4 353 21-447 1-373 (380)
60 TIGR01792 urease_alph urease, 100.0 1E-31 2.2E-36 259.2 27.8 351 6-444 53-457 (567)
61 PRK13985 ureB urease subunit b 100.0 3.6E-31 7.8E-36 251.7 29.9 334 14-444 60-458 (568)
62 PRK07627 dihydroorotase; Provi 100.0 4E-31 8.7E-36 255.0 29.8 359 19-444 1-424 (425)
63 cd01299 Met_dep_hydrolase_A Me 100.0 1E-31 2.2E-36 255.4 22.9 289 69-408 2-334 (342)
64 PRK13308 ureC urease subunit a 100.0 2.6E-30 5.6E-35 247.0 30.3 343 6-444 55-459 (569)
65 PLN02303 urease 100.0 1.7E-30 3.7E-35 256.0 29.3 342 17-444 332-727 (837)
66 KOG2584 Dihydroorotase and rel 100.0 1.8E-31 3.8E-36 238.8 19.9 387 18-456 13-468 (522)
67 PRK02382 dihydroorotase; Provi 100.0 4.8E-30 1E-34 250.5 31.2 372 18-458 1-435 (443)
68 COG0044 PyrC Dihydroorotase an 100.0 4.3E-30 9.3E-35 244.1 29.7 358 19-448 1-426 (430)
69 PRK08044 allantoinase; Provisi 100.0 2.7E-30 5.8E-35 251.6 28.0 365 18-447 2-438 (449)
70 TIGR02318 phosphono_phnM phosp 100.0 7.9E-30 1.7E-34 242.0 28.7 323 22-442 1-376 (376)
71 cd00375 Urease_alpha Urease al 100.0 1.6E-29 3.5E-34 241.4 30.1 332 17-444 63-458 (567)
72 PRK09060 dihydroorotase; Valid 100.0 9.9E-30 2.1E-34 247.5 28.7 372 17-459 3-439 (444)
73 cd01309 Met_dep_hydrolase_C Me 100.0 1.7E-30 3.7E-35 246.3 19.2 337 47-442 1-359 (359)
74 COG1820 NagA N-acetylglucosami 100.0 6.2E-29 1.3E-33 225.1 24.8 349 21-443 2-380 (380)
75 PRK09059 dihydroorotase; Valid 100.0 2.7E-28 5.7E-33 235.7 29.9 362 17-443 1-428 (429)
76 cd01300 YtcJ_like YtcJ_like me 100.0 2.8E-28 6.1E-33 241.7 29.5 176 218-404 290-479 (479)
77 TIGR01178 ade adenine deaminas 100.0 3E-28 6.5E-33 239.8 28.1 327 20-448 1-342 (552)
78 COG1001 AdeC Adenine deaminase 100.0 4.2E-28 9.2E-33 228.9 27.1 332 15-446 20-362 (584)
79 PRK08417 dihydroorotase; Provi 100.0 2.2E-28 4.8E-33 234.0 24.8 329 43-443 1-386 (386)
80 TIGR00221 nagA N-acetylglucosa 100.0 9.1E-28 2E-32 226.5 26.5 348 19-439 3-380 (380)
81 cd01308 Isoaspartyl-dipeptidas 100.0 7.4E-27 1.6E-31 225.4 33.3 340 21-450 2-383 (387)
82 PRK07369 dihydroorotase; Provi 100.0 9.7E-28 2.1E-32 230.7 26.2 328 18-408 1-385 (418)
83 PRK01211 dihydroorotase; Provi 100.0 3E-28 6.6E-33 232.3 22.3 352 22-457 2-404 (409)
84 PRK11170 nagA N-acetylglucosam 100.0 3.4E-27 7.3E-32 223.4 27.1 352 21-443 2-381 (382)
85 TIGR03121 one_C_dehyd_A formyl 100.0 1.2E-26 2.6E-31 222.7 31.0 129 320-455 372-511 (556)
86 COG3964 Predicted amidohydrola 100.0 7.1E-27 1.5E-31 200.1 23.5 319 17-408 2-339 (386)
87 TIGR00857 pyrC_multi dihydroor 100.0 3.4E-27 7.3E-32 228.2 24.1 343 39-444 4-411 (411)
88 PRK04250 dihydroorotase; Provi 100.0 1.4E-26 3E-31 221.3 27.4 346 25-454 3-396 (398)
89 PRK10027 cryptic adenine deami 100.0 1.2E-26 2.7E-31 228.3 27.1 334 16-448 27-370 (588)
90 cd01304 FMDH_A Formylmethanofu 100.0 4.8E-26 1.1E-30 217.5 28.7 125 319-450 368-504 (541)
91 cd01305 archeal_chlorohydrolas 100.0 5E-27 1.1E-31 213.9 19.4 256 77-384 1-263 (263)
92 cd00854 NagA N-acetylglucosami 100.0 8.5E-27 1.8E-31 222.3 20.9 339 21-438 1-374 (374)
93 PRK00369 pyrC dihydroorotase; 99.9 2.4E-25 5.3E-30 211.2 24.1 326 39-449 12-379 (392)
94 TIGR03583 EF_0837 probable ami 99.9 3.4E-24 7.3E-29 204.8 31.5 337 19-441 1-364 (365)
95 cd01307 Met_dep_hydrolase_B Me 99.9 7.8E-25 1.7E-29 206.8 26.6 296 42-408 1-316 (338)
96 COG3653 N-acyl-D-aspartate/D-g 99.9 6E-25 1.3E-29 196.9 22.9 93 366-459 472-569 (579)
97 COG3454 Metal-dependent hydrol 99.9 2E-25 4.4E-30 193.5 19.2 329 21-442 1-377 (377)
98 COG0804 UreC Urea amidohydrola 99.9 8E-25 1.7E-29 194.5 18.7 332 16-443 64-457 (568)
99 PF01979 Amidohydro_1: Amidohy 99.9 1.4E-24 3E-29 206.3 13.3 282 77-406 1-333 (333)
100 COG1229 FwdA Formylmethanofura 99.9 2.9E-23 6.3E-28 184.9 20.0 129 320-452 380-519 (575)
101 cd01295 AdeC Adenine deaminase 99.9 1.8E-21 3.8E-26 188.9 25.4 282 72-444 1-292 (422)
102 cd01317 DHOase_IIa Dihydroorot 99.9 3.3E-21 7.1E-26 184.5 18.2 161 223-408 172-343 (374)
103 cd01318 DHOase_IIb Dihydroorot 99.9 1.4E-20 2.9E-25 178.2 22.1 301 75-438 1-361 (361)
104 PF07969 Amidohydro_3: Amidohy 99.9 9.2E-21 2E-25 184.7 17.9 177 212-404 214-404 (404)
105 KOG3892 N-acetyl-glucosamine-6 99.9 9.4E-20 2E-24 154.1 20.3 355 21-444 14-405 (407)
106 cd01302 Cyclic_amidohydrolases 99.9 9.8E-20 2.1E-24 171.3 21.9 262 76-408 1-306 (337)
107 PRK06886 hypothetical protein; 99.9 4.5E-19 9.7E-24 163.4 25.6 271 81-388 21-328 (329)
108 cd01306 PhnM PhnM is believed 99.9 5.5E-20 1.2E-24 168.9 19.1 163 220-438 160-325 (325)
109 cd01292 metallo-dependent_hydr 99.8 5.8E-17 1.3E-21 149.4 23.5 259 82-384 1-275 (275)
110 PF13147 Amidohydro_4: Amidohy 99.8 2.2E-18 4.8E-23 161.2 13.5 77 313-403 226-304 (304)
111 cd01316 CAD_DHOase The eukaryo 99.7 1.6E-15 3.4E-20 142.0 22.2 71 367-448 260-338 (344)
112 cd01320 ADA Adenosine deaminas 99.7 4.3E-15 9.3E-20 139.9 23.6 247 97-388 45-314 (325)
113 PRK09358 adenosine deaminase; 99.7 6.8E-15 1.5E-19 139.2 24.4 249 95-388 51-323 (340)
114 TIGR01430 aden_deam adenosine 99.7 4.9E-15 1.1E-19 139.2 22.5 242 100-388 47-313 (324)
115 PF13594 Amidohydro_5: Amidohy 99.5 4.8E-15 1E-19 104.1 3.8 44 43-90 1-44 (68)
116 cd01294 DHOase Dihydroorotase 99.5 1.6E-12 3.4E-17 122.8 19.6 161 221-398 111-308 (335)
117 cd00443 ADA_AMPD Adenosine/AMP 99.2 4.4E-09 9.6E-14 97.6 20.6 135 221-387 151-293 (305)
118 cd00530 PTE Phosphotriesterase 99.1 4.8E-08 1E-12 90.8 22.2 240 123-385 30-293 (293)
119 PTZ00124 adenosine deaminase; 99.0 1.3E-07 2.9E-12 88.8 21.3 137 223-387 206-349 (362)
120 PRK05451 dihydroorotase; Provi 99.0 4.2E-08 9.1E-13 92.7 17.7 161 221-397 116-313 (345)
121 TIGR00856 pyrC_dimer dihydroor 98.9 1.3E-07 2.7E-12 89.0 19.8 162 221-406 113-311 (341)
122 cd01321 ADGF Adenosine deamina 98.9 2E-07 4.3E-12 87.5 19.6 146 220-388 176-330 (345)
123 TIGR00010 hydrolase, TatD fami 98.9 2.2E-07 4.8E-12 84.4 17.8 137 223-387 108-252 (252)
124 cd01310 TatD_DNAse TatD like p 98.8 5.5E-07 1.2E-11 81.7 17.1 135 222-386 107-251 (251)
125 PLN02599 dihydroorotase 98.7 9.6E-07 2.1E-11 83.3 17.1 156 222-393 135-328 (364)
126 PRK09875 putative hydrolase; P 98.7 7.8E-06 1.7E-10 74.5 22.4 239 124-386 33-292 (292)
127 COG1816 Add Adenosine deaminas 98.7 1.6E-06 3.6E-11 79.8 17.5 139 219-388 181-326 (345)
128 PF00962 A_deaminase: Adenosin 98.6 1.7E-06 3.7E-11 81.9 16.9 134 224-388 181-321 (331)
129 PRK11449 putative deoxyribonuc 98.4 3.4E-05 7.3E-10 69.6 17.5 137 223-387 114-258 (258)
130 COG0084 TatD Mg-dependent DNas 98.4 2E-05 4.3E-10 70.1 15.5 137 223-387 112-256 (256)
131 PRK10812 putative DNAse; Provi 98.4 4E-05 8.8E-10 69.4 17.8 139 223-388 111-257 (265)
132 PF02126 PTE: Phosphotriestera 98.3 2.9E-05 6.3E-10 71.4 14.7 238 123-385 36-307 (308)
133 COG1099 Predicted metal-depend 98.2 0.00013 2.8E-09 61.4 16.4 148 212-387 100-253 (254)
134 PRK10425 DNase TatD; Provision 98.2 0.00017 3.6E-09 65.0 18.3 139 223-387 108-258 (258)
135 TIGR01431 adm_rel adenosine de 98.2 0.00011 2.4E-09 71.9 18.1 146 220-388 303-456 (479)
136 KOG1097 Adenine deaminase/aden 98.2 0.00024 5.3E-09 65.9 18.3 141 221-388 225-372 (399)
137 COG1735 Php Predicted metal-de 98.1 0.0014 3E-08 58.5 19.7 249 122-387 45-314 (316)
138 PF01026 TatD_DNase: TatD rela 98.0 0.0002 4.4E-09 64.8 14.6 219 132-386 21-255 (255)
139 PF00449 Urease_alpha: Urease 97.5 0.00022 4.8E-09 53.0 4.9 37 18-58 65-101 (121)
140 PF07908 D-aminoacyl_C: D-amin 97.1 0.00034 7.3E-09 44.5 2.2 31 428-458 17-47 (48)
141 cd01319 AMPD AMP deaminase (AM 96.7 0.022 4.8E-07 55.7 11.5 97 278-389 351-454 (496)
142 TIGR01429 AMP_deaminase AMP de 96.6 0.045 9.6E-07 54.8 13.5 97 278-389 463-566 (611)
143 PLN03055 AMP deaminase; Provis 96.6 0.026 5.7E-07 56.2 11.4 96 278-388 441-543 (602)
144 cd01311 PDC_hydrolase 2-pyrone 96.5 0.33 7.1E-06 44.2 17.9 100 221-335 108-224 (263)
145 PLN02768 AMP deaminase 96.1 0.051 1.1E-06 55.5 10.4 95 279-388 675-776 (835)
146 PRK06361 hypothetical protein; 95.9 0.47 1E-05 41.6 15.1 96 277-387 115-210 (212)
147 PTZ00310 AMP deaminase; Provis 95.6 0.14 3E-06 55.9 11.7 96 278-388 1134-1236(1453)
148 KOG3020 TatD-related DNase [Re 93.2 6.5 0.00014 35.9 16.7 71 224-307 136-206 (296)
149 PTZ00310 AMP deaminase; Provis 93.1 0.53 1.1E-05 51.6 9.5 96 278-388 504-607 (1453)
150 COG2159 Predicted metal-depend 92.6 5.9 0.00013 36.6 14.6 145 220-389 141-292 (293)
151 PRK07945 hypothetical protein; 92.4 7.1 0.00015 36.9 15.2 47 287-334 248-295 (335)
152 PF12890 DHOase: Dihydro-orota 91.9 0.05 1.1E-06 42.3 0.2 15 75-89 1-15 (142)
153 COG1387 HIS2 Histidinol phosph 90.9 8.6 0.00019 34.3 13.3 48 288-335 151-198 (237)
154 PRK00912 ribonuclease P protei 89.6 3.2 7E-05 37.0 9.6 97 286-397 120-227 (237)
155 PF04909 Amidohydro_2: Amidohy 88.2 1.4 3.1E-05 40.0 6.6 167 202-387 96-273 (273)
156 COG1831 Predicted metal-depend 87.8 11 0.00024 33.6 11.1 137 220-388 142-283 (285)
157 TIGR01856 hisJ_fam histidinol 86.7 24 0.00051 31.8 14.7 45 288-333 189-239 (253)
158 COG3618 Predicted metal-depend 85.8 27 0.00059 31.6 15.1 136 223-387 124-278 (279)
159 COG0418 PyrC Dihydroorotase [N 83.6 15 0.00033 33.4 10.0 108 223-336 118-253 (344)
160 PRK07328 histidinol-phosphatas 83.4 35 0.00077 31.0 15.2 45 288-333 181-231 (269)
161 PRK08609 hypothetical protein; 81.7 67 0.0014 33.0 18.1 46 288-334 483-529 (570)
162 COG4464 CapC Capsular polysacc 73.7 4.2 9.2E-05 34.8 3.5 49 287-335 147-198 (254)
163 PRK06740 histidinol-phosphatas 68.2 1.1E+02 0.0024 28.9 14.1 44 290-333 245-294 (331)
164 COG1603 RPP1 RNase P/RNase MRP 65.3 47 0.001 29.1 8.2 86 286-386 115-210 (229)
165 cd01301 rDP_like renal dipepti 63.2 1.3E+02 0.0028 28.1 11.7 93 224-334 155-267 (309)
166 TIGR01182 eda Entner-Doudoroff 60.2 99 0.0021 26.8 9.3 89 220-327 17-105 (204)
167 PRK06015 keto-hydroxyglutarate 56.7 1.2E+02 0.0026 26.2 9.2 89 220-327 13-101 (201)
168 COG5016 Pyruvate/oxaloacetate 56.2 1.2E+02 0.0026 29.1 9.6 102 130-246 103-209 (472)
169 TIGR01496 DHPS dihydropteroate 53.6 87 0.0019 28.3 8.3 93 194-305 26-126 (257)
170 KOG4549 Magnesium-dependent ph 47.3 74 0.0016 25.0 5.7 80 68-164 7-86 (144)
171 PRK06552 keto-hydroxyglutarate 47.2 2E+02 0.0042 25.2 9.3 90 220-328 22-114 (213)
172 COG0800 Eda 2-keto-3-deoxy-6-p 44.0 1.6E+02 0.0034 25.6 7.8 89 220-327 22-110 (211)
173 PF01244 Peptidase_M19: Membra 43.1 1.9E+02 0.004 27.2 9.0 90 226-333 163-274 (320)
174 COG2355 Zn-dependent dipeptida 43.0 2.8E+02 0.0062 25.8 10.1 96 225-335 151-265 (313)
175 PRK03892 ribonuclease P protei 43.0 2.2E+02 0.0048 24.6 8.7 87 285-386 118-214 (216)
176 PRK14042 pyruvate carboxylase 38.4 2.6E+02 0.0056 28.9 9.7 102 130-246 101-207 (596)
177 PF01081 Aldolase: KDPG and KH 37.2 1.1E+02 0.0023 26.4 5.9 88 221-327 18-105 (196)
178 PRK12581 oxaloacetate decarbox 37.0 3.1E+02 0.0066 27.4 9.7 102 131-247 111-217 (468)
179 PRK09140 2-dehydro-3-deoxy-6-p 34.6 3.1E+02 0.0067 23.8 9.6 92 219-329 18-110 (206)
180 PF04571 Lipin_N: lipin, N-ter 33.8 62 0.0013 24.7 3.4 42 400-441 28-71 (110)
181 PF02811 PHP: PHP domain; Int 33.3 1.5E+02 0.0033 24.3 6.4 39 132-170 23-64 (175)
182 cd01733 LSm10 The eukaryotic S 32.1 1.4E+02 0.003 21.2 4.9 35 18-54 42-76 (78)
183 PRK07114 keto-hydroxyglutarate 30.4 3.8E+02 0.0083 23.6 10.2 89 220-327 24-116 (222)
184 cd01725 LSm2 The eukaryotic Sm 29.7 1.3E+02 0.0028 21.5 4.5 39 18-56 34-72 (81)
185 PRK09856 fructoselysine 3-epim 29.4 4.2E+02 0.0092 23.8 10.5 112 130-244 18-150 (275)
186 PRK05718 keto-hydroxyglutarate 29.0 3.9E+02 0.0085 23.3 8.9 90 219-327 23-112 (212)
187 PF10055 DUF2292: Uncharacteri 27.9 82 0.0018 18.8 2.6 15 42-56 19-33 (38)
188 cd01721 Sm_D3 The eukaryotic S 27.2 1.9E+02 0.0041 20.0 4.8 34 19-54 34-67 (70)
189 PRK12595 bifunctional 3-deoxy- 27.0 5.7E+02 0.012 24.5 9.5 119 217-335 163-299 (360)
190 COG2131 ComEB Deoxycytidylate 26.8 2.3E+02 0.0051 23.5 5.9 21 39-59 29-49 (164)
191 KOG0203 Na+/K+ ATPase, alpha s 24.7 1.3E+02 0.0027 32.1 4.9 161 220-444 590-767 (1019)
192 PF12690 BsuPI: Intracellular 24.4 41 0.00089 24.2 1.1 14 395-408 21-34 (82)
193 PRK12330 oxaloacetate decarbox 24.1 7.5E+02 0.016 25.0 10.2 102 130-246 102-210 (499)
194 TIGR03221 muco_delta muconolac 24.0 1.2E+02 0.0026 22.3 3.3 43 365-408 11-58 (90)
195 KOG1096 Adenosine monophosphat 23.8 1.9E+02 0.0042 29.8 5.8 56 279-334 612-672 (768)
196 cd01724 Sm_D1 The eukaryotic S 23.5 2.3E+02 0.0051 20.7 4.9 35 19-55 35-69 (90)
197 cd01723 LSm4 The eukaryotic Sm 22.8 1.9E+02 0.0042 20.3 4.3 37 18-55 34-70 (76)
198 PF11068 YlqD: YlqD protein; 22.2 94 0.002 24.7 2.8 14 40-53 117-130 (131)
199 PRK12331 oxaloacetate decarbox 21.7 5.9E+02 0.013 25.3 8.8 103 130-247 101-208 (448)
200 PRK08392 hypothetical protein; 20.9 1.3E+02 0.0029 26.2 3.9 44 288-333 141-184 (215)
201 PLN02727 NAD kinase 20.6 8.3E+02 0.018 26.8 9.8 31 218-248 322-353 (986)
202 PRK15108 biotin synthase; Prov 20.3 5.1E+02 0.011 24.6 7.9 16 284-299 133-148 (345)
No 1
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=100.00 E-value=2.4e-57 Score=440.66 Aligned_cols=426 Identities=30% Similarity=0.449 Sum_probs=360.2
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
++++|+|+.|+++++...++++++|+|+||+|++|++..... ..+++++||++|++|+|||||+|+|+.++.+++..
T Consensus 1 ~~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~---~~~~~~viD~~g~~i~PGlVn~H~H~~~~~~rg~~ 77 (435)
T PRK15493 1 MKTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFAS---DFEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRGIG 77 (435)
T ss_pred CeEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCccccc---cCCCCeEEeCCCCEEccceeecccCccchhhhccC
Confidence 468999999999887667889999999999999999843211 11356899999999999999999999999999998
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc---cCHHHHHHHHHHhCCeEEeecccccCCC
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGE 175 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (466)
.+.++.+|+....|+.+..+++++.+......+.+++++||||++|+.. .......++..+.|+|..++...++.+.
T Consensus 78 ~~~~l~~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~ 157 (435)
T PRK15493 78 DDMLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGT 157 (435)
T ss_pred CCCCHHHHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEccccccccCHHHHHHHHHHcCCcEEEeeeecCCCC
Confidence 8889999999888999888888888888888999999999999999753 2345677888899999988776664321
Q ss_pred CCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh
Q 012333 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (466)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 255 (466)
+ ......+......++++... .+.++..++++.++.++++.+.++.++|+++|+++++|+.+...+......
T Consensus 158 --~-----~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~t~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~ 229 (435)
T PRK15493 158 --K-----EDEKKAIEEAEKYVKRYYNE-SGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDIEA 229 (435)
T ss_pred --C-----ccHHHHHHHHHHHHHHhcCC-CCCeEEEEeCCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH
Confidence 1 12234455556666665432 367888899999999999999999999999999999999998776666655
Q ss_pred hcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCC
Q 012333 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (466)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~ 334 (466)
..+ ..+.+.+...++++.+.++.||.++++++++++++.|+.+++||.+++++ .+.+|++++++.|+++++|||+..
T Consensus 230 ~~g--~~~~~~l~~~Gll~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lGtD~~~ 307 (435)
T PRK15493 230 QYG--KRPVEYAASCGLFKRPTVIAHGVVLNDNERAFLAEHDVRVAHNPNSNLKLGSGIANVKAMLEAGIKVGIATDSVA 307 (435)
T ss_pred HhC--CCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCeEEEChHHHHHHhcCcccHHHHHHCCCeEEEccCccc
Confidence 544 45788999999999999999999999999999999999999999999876 788999999999999999999876
Q ss_pred CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCC
Q 012333 335 SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMV 413 (466)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~ 413 (466)
.++..+++.+|+.+.+.++... ..+..++++++++++|.+||+++|++ ++|+|++|+.||||++|.+ .+...
T Consensus 308 ~~~~~d~~~~~~~a~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~-~~G~l~~G~~ADlvv~d~~~~~~~~ 380 (435)
T PRK15493 308 SNNNLDMFEEMRIATLLQKGIH------QDATALPVETALTLATKGAAEVIGMK-QTGSLEVGKCADFITIDPSNKPHLQ 380 (435)
T ss_pred cCCCcCHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHhHHHHHHcCCC-CCCccCCCCcCCEEEEcCCCCCCcC
Confidence 6667899999998877765321 12346999999999999999999995 4899999999999999975 56667
Q ss_pred CcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHhh
Q 012333 414 PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 464 (466)
Q Consensus 414 ~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~~ 464 (466)
|..+++..+++......|..|||+|++|+++|+++.+|+++++.+..+..-
T Consensus 381 p~~d~~~~lv~~~~~~~V~~v~V~G~~v~~~g~~~~~d~~~~~~~~~~~~~ 431 (435)
T PRK15493 381 PADEVLSHLVYAASGKDISDVIINGKRVVWNGECKTLDEERIIFEASRYKR 431 (435)
T ss_pred CccChHHhEEEeCCCCCccEEEECCEEEEECCeECCCCHHHHHHHHHHHHH
Confidence 889999999999888899999999999999999999999999988776543
No 2
>PRK06687 chlorohydrolase; Validated
Probab=100.00 E-value=7.4e-56 Score=430.64 Aligned_cols=412 Identities=29% Similarity=0.483 Sum_probs=347.7
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
.+|+|+.|+|+++....+++++|+|++|+|++|++..+.. .....++||++|++|+|||||+|+|+.++..++...+
T Consensus 2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~---~~~~~~viD~~g~~v~PGlIn~H~H~~~~~~rg~~~~ 78 (419)
T PRK06687 2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAF---LEQAEQIIDYQGAWIMPGLVNCHTHSAMTGLRGIRDD 78 (419)
T ss_pred cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCccccc---ccccCeEEeCCCCEEccceeeeccCCCccccccccCC
Confidence 4799999999987777889999999999999999854321 1124689999999999999999999999999998888
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc---cCHHHHHHHHHHhCCeEEeecccccCCCCC
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEGL 177 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (466)
.++.+|+....|+.+...++++.+........+++++||||+.++.. .......++..+.|++..+....+...
T Consensus 79 ~~~~~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~~~~--- 155 (419)
T PRK06687 79 SNLHEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNPNGVDIQQIYQVVKTSKMRCYFSPTLFSSE--- 155 (419)
T ss_pred CCHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhhccccccHHHHHHHHHHhCCceEeccccccCC---
Confidence 89999999999998888887777777777889999999999999753 235667788889999987765443211
Q ss_pred CcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhc
Q 012333 178 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (466)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 257 (466)
.......+++..+.++++...+...++..+.++.++.++++.+.++++.|+++|+++++|+.+...+........
T Consensus 156 -----~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e~~~e~~~~~~~~ 230 (419)
T PRK06687 156 -----TETTAETISRTRSIIDEILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGIILKRY 230 (419)
T ss_pred -----cccHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHH
Confidence 112344556667777776655556788889999999999999999999999999999999999887666555544
Q ss_pred CCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCCCC
Q 012333 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN 336 (466)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~ 336 (466)
+ ..+.+.++..++++.+.++.|+.++++++++++++.|+.+++||.++++. .+.+|++++++.|+++++|||+...+
T Consensus 231 g--~~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lGtD~~~~~ 308 (419)
T PRK06687 231 G--KRPLAFLEELGYLDHPSVFAHGVELNEREIERLASSQVAIAHNPISNLKLASGIAPIIQLQKAGVAVGIATDSVASN 308 (419)
T ss_pred C--cCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECcHHhhhhccCCCcHHHHHHCCCeEEEeCCCCCCC
Confidence 4 34778889999999999999999999999999999999999999999876 67899999999999999999987666
Q ss_pred CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCCc
Q 012333 337 NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVPV 415 (466)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~~ 415 (466)
+..+++..++.+...++... ..+..++++++++++|.+||+++|+++++|+|++|+.|||+++|.+ .+...|.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~~~~G~l~~G~~ADlv~~d~~~~~~~~p~ 382 (419)
T PRK06687 309 NNLDMFEEGRTAALLQKMKS------GDASQFPIETALKVLTIEGAKALGMENQIGSLEVGKQADFLVIQPQGKIHLQPQ 382 (419)
T ss_pred CChhHHHHHHHHHHHhcccc------CCCccCCHHHHHHHHhHHHHHHcCCCCCCcccCCCccCCEEEECCCCCCCcCCc
Confidence 67889999998776655321 1234589999999999999999999878999999999999999987 5777788
Q ss_pred CCcccceecccCCCCeeEEEEccEEEEECCeeeecc
Q 012333 416 HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLM 451 (466)
Q Consensus 416 ~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~ 451 (466)
.|++..+++.....+|..|||+|++|+++|++++++
T Consensus 383 ~~~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d 418 (419)
T PRK06687 383 ENMLSHLVYAVKSSDVDDVYIAGEQVVKQGQVLTVE 418 (419)
T ss_pred cCHHHHhheeCCCCCccEEEECCEEEEECCeEecCC
Confidence 899999999999999999999999999999998776
No 3
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=6.5e-55 Score=426.33 Aligned_cols=429 Identities=32% Similarity=0.532 Sum_probs=350.0
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
.+.|++|+|+.|+++++...++++++|+|+||+|++|++..+....+ ++.++||++|++|+|||||+|+|+.++.+++
T Consensus 5 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~--~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~g 82 (443)
T PRK09045 5 EPVDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARY--AAAETVELPDHVLIPGLINAHTHAAMSLLRG 82 (443)
T ss_pred ccccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCcccccccC--CcceEEeCCCCEEecCEeccccChhhHhhhh
Confidence 35689999999999876567889999999999999999865432211 2568999999999999999999999988888
Q ss_pred ccCCCCchHhhhhcccccc-CCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCCC
Q 012333 97 IADDVDLMTWLHDRIWPYE-SNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (466)
...+.++.+|+....|+.+ ...++.+.+......+.+++++||||++++. .+.....++..+.|+|...+...++.
T Consensus 83 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~-~~~~~~~~~~~~~G~R~~~~~~~~~~-- 159 (443)
T PRK09045 83 LADDLPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMY-FFPEAAAEAAHQAGMRAQIGMPVLDF-- 159 (443)
T ss_pred ccCCCCHHHHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecc-ccHHHHHHHHHHcCCeEEEecccccC--
Confidence 7777888999988777654 3466777788888889999999999999975 34445577788899999877655532
Q ss_pred CCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh
Q 012333 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (466)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 255 (466)
+..+ .....+.+....+..+.++ +...+++.+.++..+.++++.+.+++++|+++|+++++|+.+...+......
T Consensus 160 --~~~~-~~~~~~~l~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~ 234 (443)
T PRK09045 160 --PTAW-ASDADEYLAKGLELHDQWR--HHPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLHETAQEIADSLK 234 (443)
T ss_pred --CCcc-ccCHHHHHHHHHHHHHHhc--CCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCEEEeecCcHHHHHHHHH
Confidence 1111 1233444554555555554 3467888888888889999999999999999999999999876655554444
Q ss_pred hcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCC
Q 012333 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (466)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~ 334 (466)
..+ ..+.+.+...+.++.+.++.|+.++++++++++++.|+.+++||.++++. .+..+++++++.|+++++|||+++
T Consensus 235 ~~g--~~~~~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~i~~~P~~~~~~~~~~~~~~~l~~~Gv~v~lGtD~~~ 312 (443)
T PRK09045 235 QHG--QRPLARLARLGLLGPRLIAVHMTQLTDAEIALLAETGCSVVHCPESNLKLASGFCPVAKLLQAGVNVALGTDGAA 312 (443)
T ss_pred HhC--CCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEECHHHHhhhccCCCcHHHHHHCCCeEEEecCCCC
Confidence 333 34678888899999999999999999999999999999999999988765 567899999999999999999886
Q ss_pred CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCC
Q 012333 335 SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (466)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~ 414 (466)
.+...+++..++.+....+... ....+++++++++++|.+||+++|+++++|+|++|+.|||||+|.+.+...|
T Consensus 313 ~~~~~~~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~p 386 (443)
T PRK09045 313 SNNDLDLFGEMRTAALLAKAVA------GDATALPAHTALRMATLNGARALGLDDEIGSLEPGKQADLVAVDLSGLETQP 386 (443)
T ss_pred CCCCccHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEeCCCCCcCC
Confidence 6566789999888765544221 1234599999999999999999999888999999999999999999887778
Q ss_pred cCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 415 VHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 415 ~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
.+++...+++.....+|..||++|++||++|+++++++++++++.++..
T Consensus 387 ~~~~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~ 435 (443)
T PRK09045 387 VYDPVSQLVYAAGREQVSHVWVAGKQLLDDRELTTLDEAELLARARQWR 435 (443)
T ss_pred ccChHhHhhEeCCCCCccEEEECCEEEEECCcCCCCCHHHHHHHHHHHH
Confidence 8888787877777889999999999999999999999999999887654
No 4
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.3e-54 Score=425.55 Aligned_cols=430 Identities=35% Similarity=0.587 Sum_probs=351.6
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
|+++|+|+.|+++++. ..+++++|+|+||+|++|++.... + .+.++||++|++|+|||||+|+|+.++..++..
T Consensus 1 ~~~~i~~~~vi~~~~~-~~~~~g~V~I~dg~I~~vg~~~~~----~-~~~~vID~~G~~vlPGlId~H~H~~~~~~~g~~ 74 (445)
T PRK07228 1 MTILIKNAGIVTMNAK-REIVDGDVLIEDDRIAAVGDRLDL----E-DYDDHIDATGKVVIPGLIQGHIHLCQTLFRGIA 74 (445)
T ss_pred CeEEEEccEEEecCCC-cEecccEEEEECCEEEEecCCccc----C-cCCeEEeCCCCEEecCEEecccCCccccceecc
Confidence 4699999999997653 456899999999999999975432 1 256899999999999999999999988888877
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-CHHHHHHHHHHhCCeEEeecccccCCCCC
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGLRACLVQSTMDCGEGL 177 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (466)
.+.++.+|+....|+....+++++.+..+...+.+++.+||||+++++.. ......++....|+|.......++.+. .
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~-~ 153 (445)
T PRK07228 75 DDLELLDWLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDMESVHHTDSAFEAAGESGIRAVLGKVMMDYGD-D 153 (445)
T ss_pred CCCCHHHHHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEccccccChHHHHHHHHHcCCeEEEecceecCCc-C
Confidence 77789999988888888888999999998899999999999999998743 345667788889999877766665431 1
Q ss_pred CcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhc
Q 012333 178 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (466)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 257 (466)
.+..........+.+....++.+.....+.+...+.++....++++.+.+++++++++|+++++|+.+...+........
T Consensus 154 ~p~~~~~~~~~~l~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~ 233 (445)
T PRK07228 154 VPEGLQEDTEASLAESVRLLEKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVEEET 233 (445)
T ss_pred CCccccccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHh
Confidence 11222223445566666777666443334566556677777788999999999999999999999988766555544443
Q ss_pred CCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCCCC
Q 012333 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN 336 (466)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~ 336 (466)
+ ....+.++..+.++.+..+.|+.++++++++++++.|+.+++||.+++.. .+..|++++++.|+++++|||+++.+
T Consensus 234 g--~~~~~~l~~~g~~~~~~~l~H~~~~~~~~~~~~~~~g~~v~~~P~~~~~~~~~~~p~~~~~~~Gv~v~lGtD~~~~~ 311 (445)
T PRK07228 234 G--MRNIHYLDEVGLTGEDLILAHCVWLDEEEREILAETGTHVTHCPSSNLKLASGIAPVPDLLERGINVALGADGAPCN 311 (445)
T ss_pred C--CCHHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCeEEEChHHhhhcccccCcHHHHHHCCCeEEEcCCCCccC
Confidence 3 34678888899999999999999999999999999999999999998766 67889999999999999999998765
Q ss_pred CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcC
Q 012333 337 NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH 416 (466)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~ 416 (466)
...++|..++.+....+... ..+..++++++++++|.+||+++|+++++|+|++|+.|||||+|.+.+...|.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~------~~~~~~s~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~p~~ 385 (445)
T PRK07228 312 NTLDPFTEMRQAALIQKVDR------LGPTAMPARTVFEMATLGGAKAAGFEDEIGSLEEGKKADLAILDLDGLHATPSH 385 (445)
T ss_pred CCccHHHHHHHHHHHhhhcc------CCCcccCHHHHHHHHHHHHHHHhCCCCCccccCCCCccCEEEEcCCCcccCCCc
Confidence 56789999887766554321 112359999999999999999999987889999999999999999987777777
Q ss_pred --CcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 417 --DRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 417 --~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
+++..+++.....+|..||++|++||++|+++.++++.+.++..+..
T Consensus 386 ~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~ 434 (445)
T PRK07228 386 GVDVLSHLVYAAHGSDVETTMVDGKIVMEDGELTTIDADAVRREANRSI 434 (445)
T ss_pred ccCHHHHhheeCCCCCeeEEEECCEEEEECCeEccCCHHHHHHHHHHHH
Confidence 78787777777889999999999999999999999999998877654
No 5
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=100.00 E-value=5.5e-54 Score=419.68 Aligned_cols=422 Identities=26% Similarity=0.420 Sum_probs=348.5
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccC-
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD- 99 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~- 99 (466)
++|+|++|+++++...+..+++|.|++|+|++|++..+....+ ++.++||++|++|+|||||+|+|++++.+++...
T Consensus 2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~--~~~~viD~~g~lv~PGfID~H~H~~~~~~rg~~~~ 79 (442)
T PRK07203 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKY--PDAEFIDAKGKLIMPGLINSHNHIYSGLARGMMAN 79 (442)
T ss_pred EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhcccc--CCCeEEeCCCCEEecceeeccccchhhhhcccccc
Confidence 5899999998765445667889999999999999743321111 2457999999999999999999999888888642
Q ss_pred ---CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc------CHHHHHHHHHHhCCeEEeeccc
Q 012333 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------HVSEMAKAVELLGLRACLVQST 170 (466)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~------~~~~~~~~~~~~g~~~~~~~~~ 170 (466)
..++.+|+....|+.+..+++++.+......+.+++++||||++++... ......++..+.|+|..++...
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~ 159 (442)
T PRK07203 80 IPPPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYIGGSLFTIADAAKKVGLRAMLCYET 159 (442)
T ss_pred cCCCCCHHHHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccccccchHHHHHHHHHHhCCeEEEeccc
Confidence 2478899999899999999999999888888899999999999986421 1245677888999999876655
Q ss_pred ccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 012333 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (466)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (466)
.+.. + .....+.+....+.++.++......+...++++.++.++++.++++.++|+++++++++|+.+...+.
T Consensus 160 ~d~~-~------~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~~e~ 232 (442)
T PRK07203 160 SDRD-G------EKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRGYHIHVAEGIYDV 232 (442)
T ss_pred ccCC-c------chhHHHHHHHHHHHHHHhcCCCCCceEEEEccCCCcCcCHHHHHHHHHHHHHcCCcEEEEecCChHHH
Confidence 4422 0 11223445556666677665445578888999999999999999999999999999999999999888
Q ss_pred HHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEc
Q 012333 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLG 329 (466)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~g 329 (466)
......++ ..+.+.++..++++++.++.||.++++++++++++.|+.+++||.++++. .+.+|+.+++++|+++++|
T Consensus 233 ~~~~~~~g--~~~v~~l~~~Gll~~~~~~~H~~~~~~~d~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lG 310 (442)
T PRK07203 233 SDSHKKYG--KDIVERLADFGLLGEKTLAAHCIYLSDEEIDLLKETDTFVVHNPESNMGNAVGYNPVLEMIKNGILLGLG 310 (442)
T ss_pred HHHHHHcC--CCHHHHHHhCCCCCCCcEEEEeecCCHHHHHHHHhcCCeEEECchhhhhcccCCCCHHHHHHCCCeEEEc
Confidence 87777655 45889999999999999999999999999999999999999999999887 6789999999999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC--CCCcccccccCCccCEEEEcC
Q 012333 330 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL--WDNDIGSLEAGKKADMVVVDP 407 (466)
Q Consensus 330 sD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg--l~~~~G~i~~G~~ADlvv~d~ 407 (466)
||+.. .+++..++.+...++... ..+ .++++++++++|.+||+++| +.++.|+|++||.||||++|.
T Consensus 311 tD~~~----~d~~~~~~~a~~~~~~~~------~~~-~~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~~G~~ADlvv~d~ 379 (442)
T PRK07203 311 TDGYT----SDMFESYKVANFKHKHAG------GDP-NVGWPESPAMLFENNNKIAERYFGAKFGILEEGAKADLIIVDY 379 (442)
T ss_pred CCCCC----ccHHHHHHHHHHHhcccc------CCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccCEEEEcC
Confidence 99743 489999998877766421 111 24678999999999999999 456789999999999999999
Q ss_pred CCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHhh
Q 012333 408 FSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 464 (466)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~~ 464 (466)
+.....+..+++..+++......|..|||+|++|+++|+++++|++++.++..+...
T Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~i~~~~~~~~~ 436 (442)
T PRK07203 380 NPPTPLNEDNINGHILFGMNGGSVDTTIVNGKVVMEDRKFLNFDEESIYARARKAAA 436 (442)
T ss_pred CCCeecCccccccceEeecCCCceEEEEECCEEEEECCcccccCHHHHHHHHHHHHH
Confidence 865555667888889988888999999999999999999999999999988776543
No 6
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=100.00 E-value=5.2e-54 Score=418.05 Aligned_cols=422 Identities=25% Similarity=0.405 Sum_probs=348.9
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|+++++....+.+++|.|++|+|++|++..+....+ .+.++||++|++|+|||||+|+|+.+...++...+
T Consensus 1 ~li~~~~i~t~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~--~~~~~id~~g~~v~PG~vd~H~H~~~~~~rg~~~d 78 (441)
T TIGR03314 1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKY--PEATFIDAKGKLIMPGFINTHNHFYSTFARGMMAD 78 (441)
T ss_pred CEEECCEEEecCCCCceEeccEEEEECCEEEEEcCchhhcccC--CCCeEEeCCCCEEecCeeecccchhhhhhcccccc
Confidence 4799999998776555778899999999999999854332111 24578999999999999999999999888887544
Q ss_pred ----CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc------CHHHHHHHHHHhCCeEEeeccc
Q 012333 101 ----VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------HVSEMAKAVELLGLRACLVQST 170 (466)
Q Consensus 101 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~------~~~~~~~~~~~~g~~~~~~~~~ 170 (466)
.++.+|+....|+.+..+++++.+......+.+++++||||++|+... ......++..+.|+|..++...
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~ 158 (441)
T TIGR03314 79 IPPPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHASPNAITGSLSTIRKAADEAGLRTMLCYET 158 (441)
T ss_pred CCCCCCHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccccccccchHHHHHHHHHHhCCeEEEeeee
Confidence 368999999999999999999999999888899999999999997421 1356778899999999887766
Q ss_pred ccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 012333 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (466)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (466)
++...+ ....+.+....+++++++....+.++..++++.++.++++.++++.++|+++++++++|+.++..+.
T Consensus 159 ~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~i~~H~~E~~~e~ 231 (441)
T TIGR03314 159 SDRDGG-------KEMQEGVEENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIYDV 231 (441)
T ss_pred ecCCCc-------ccHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCHHHH
Confidence 543211 1223344555566666665445678888999999999999999999999999999999999998887
Q ss_pred HHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEc
Q 012333 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLG 329 (466)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~g 329 (466)
.......+ ..+.+.++..++++++.++.||.++++++++++++.|+.+++||.+++++ .+.+|+.+++++|+++++|
T Consensus 232 ~~~~~~~g--~~~~~~l~~~G~l~~~~~~~H~~~~~~~d~~~la~~g~~v~~cP~sn~~l~~G~~p~~~~~~~Gv~v~LG 309 (441)
T TIGR03314 232 EDSHHKYG--KDIVERLADFGLLGSKTLAAHCIYLSDREIELLNETDTFVVHNPESNMGNAVGYNPVLRMFKNGILLGLG 309 (441)
T ss_pred HHHHHHcC--CCHHHHHHHCCCCCCCeEEEEEecCCHHHHHHHHHcCCcEEECHHHHhhhccCCCCHHHHHHCCCEEEEc
Confidence 77776555 45889999999999999999999999999999999999999999999987 6799999999999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC--CCCcccccccCCccCEEEEcC
Q 012333 330 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL--WDNDIGSLEAGKKADMVVVDP 407 (466)
Q Consensus 330 sD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg--l~~~~G~i~~G~~ADlvv~d~ 407 (466)
||+.. .+++++|+.+...++.... .....+.++++++|.++|+.+| +..++|+|++|+.|||+++|.
T Consensus 310 tD~~~----~d~~~em~~a~~~~~~~~~-------~~~~~~~~~~~~aT~~ga~al~~~l~~~~G~Le~G~~ADlvv~d~ 378 (441)
T TIGR03314 310 TDGYT----SDMFESLKFANFKHKDAGG-------DLNAAWPESPAMLFENNNEIAERNFGAKFGRLEPGAKADLIIVDY 378 (441)
T ss_pred CCCCC----cCHHHHHHHHHHHhccccC-------CCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccEEEEcC
Confidence 99743 4899999998877664311 1113467899999999999996 455789999999999999999
Q ss_pred CCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHhh
Q 012333 408 FSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 464 (466)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~~ 464 (466)
+.....|..++.+.+++.....+|..|||+|++|+++++++++|++++.++..+...
T Consensus 379 ~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~~~~~~~~d~~~i~~~~~~~~~ 435 (441)
T TIGR03314 379 NAPTPLTADNINGHILFGMNGGSVDSTMVNGKVVMEDREFLHFDEAPIYARARKLAQ 435 (441)
T ss_pred CCCeeechhhccccceecCCCCeeEEEEECCEEEEECCcccccCHHHHHHHHHHHHH
Confidence 865555666777788887778899999999999999999999999999988776543
No 7
>PRK12393 amidohydrolase; Provisional
Probab=100.00 E-value=5.1e-53 Score=412.94 Aligned_cols=431 Identities=26% Similarity=0.344 Sum_probs=347.3
Q ss_pred cceEEEEccE-EEeecCCcceeec-eEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccc
Q 012333 18 SSTMILHNAV-IVTMDKESRVFRN-GGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (466)
Q Consensus 18 ~~~~lI~n~~-i~~~d~~~~~~~~-~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~ 95 (466)
|.|++|+|+. |++.++....+.+ ++|+|++|+|++|++. . +.+++++||++|++|+|||||+|+|++++.++
T Consensus 1 ~~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~~-~-----~~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~r 74 (457)
T PRK12393 1 MPSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGAL-T-----PLPGERVIDATDCVVYPGWVNTHHHLFQSLLK 74 (457)
T ss_pred CCcEEEECCeEEEecCCCccccccCceEEEECCEEEEEecc-C-----CCCCCeEEeCCCCEEecCEeecccCccccccc
Confidence 4689999996 7876654344444 4899999999999982 1 11367899999999999999999999999999
Q ss_pred ccc--CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc--------cCHHHHHHHHHHhCCeEE
Q 012333 96 GIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLRAC 165 (466)
Q Consensus 96 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~--------~~~~~~~~~~~~~g~~~~ 165 (466)
+.. .+.++.+|+....|+.+..+++++.+......+.+++.+||||++|+.. .......++..+.|+|..
T Consensus 75 g~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~a~~~~G~R~~ 154 (457)
T PRK12393 75 GVPAGINQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFV 154 (457)
T ss_pred ccccccCCchHHHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhcccccccchHHHHHHHHHHcCCeEE
Confidence 874 3567889999988988888898899999999999999999999998742 123567888999999998
Q ss_pred eecccccCCCCCCc----ccccCChHHHHHHHHHHHHHhccCC-CCCeEEEEeeccc-ccCCHHHHHHHHHHHHHcCCcc
Q 012333 166 LVQSTMDCGEGLPA----SWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQI-MNATDRLLLETRDMAREFKTGI 239 (466)
Q Consensus 166 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~-~~~~~~~l~~~~~~a~~~~~~v 239 (466)
++....+...+.+. ..........++...++.+.++... ...+.+.+.++.+ +.++++.++++++.++++|+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~g~~~ 234 (457)
T PRK12393 155 LCRGGATQTRGDHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLRRVVVAPTTPTFSLPPELLREVARAARGMGLRL 234 (457)
T ss_pred EEccccccccccCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCceEEEEcCCCCCCCcCHHHHHHHHHHHHHcCCeE
Confidence 77654432222111 1122234455555566666665432 2346666777777 7889999999999999999999
Q ss_pred ceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHH
Q 012333 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKE 318 (466)
Q Consensus 240 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~ 318 (466)
++|+.+...+........+ ..+.+.++..+.++.+.++.|+.++++++++++++.|+.+++||.++++. .+.+++++
T Consensus 235 ~~H~~e~~~~~~~~~~~~g--~~~~~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g~~~~~~ 312 (457)
T PRK12393 235 HSHLSETVDYVDFCREKYG--MTPVQFVAEHDWLGPDVWFAHLVKLDAEEIALLAQTGTGIAHCPQSNGRLGSGIAPALA 312 (457)
T ss_pred EEEeCCCHHHHHHHHHHhC--CCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECchhhhhhcccCCCHHH
Confidence 9999988766655554443 34778889999999999999999999999999999999999999999877 67899999
Q ss_pred HHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCC
Q 012333 319 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (466)
Q Consensus 319 ~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~ 398 (466)
+++.|+++++|||+...+...++|..++.+....+.. ..+..++++++++++|.+||+++|+++ +|+|++|+
T Consensus 313 ~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~-------~~~~~~~~~~~l~~~T~~~A~~l~~~~-~G~l~~G~ 384 (457)
T PRK12393 313 MEAAGVPVSLGVDGAASNESADMLSEAHAAWLLHRAE-------GGADATTVEDVVHWGTAGGARVLGLDA-IGTLAVGQ 384 (457)
T ss_pred HHHCCCeEEEecCCcccCCCccHHHHHHHHHHHhhhc-------CCCCCCCHHHHHHHHhHHHHHHhCCCC-CCCcCCCC
Confidence 9999999999999876656789999999887765431 112359999999999999999999964 89999999
Q ss_pred ccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHhh
Q 012333 399 KADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 464 (466)
Q Consensus 399 ~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~~ 464 (466)
.|||+|+|.+.....|..++...+++.....+|..||++|+++|++++++++|++++.++..+..-
T Consensus 385 ~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~~~~~~~d~~~i~~~~~~~~~ 450 (457)
T PRK12393 385 AADLAIYDLDDPRFFGLHDPAIAPVACGGPAPVKALLVNGRPVVENGAIPGLDLAELRHDARAAVR 450 (457)
T ss_pred cCCEEEEeCCCcccCCCCCchhhhhccCCCCCeeEEEECCEEEEECCccCCCCHHHHHHHHHHHHH
Confidence 999999999977767777777767666677899999999999999999999999999988776543
No 8
>PRK08204 hypothetical protein; Provisional
Probab=100.00 E-value=4.2e-53 Score=415.71 Aligned_cols=426 Identities=26% Similarity=0.359 Sum_probs=342.4
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
|.+++|+|+.|++.++....+.+++|+|++|+|++|++..+. ++.++||++|++|+|||||+|+|+.++..++.
T Consensus 1 ~~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~~------~~~~viD~~g~~v~PGlId~H~H~~~~~~~~~ 74 (449)
T PRK08204 1 MKRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIEA------PDAEVVDARGMIVMPGLVDTHRHTWQSVLRGI 74 (449)
T ss_pred CCcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCCC------CCCeEEeCCCCEEecCEEeeeeccchhhhccc
Confidence 456899999999877655677889999999999999985431 25579999999999999999999998888887
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-----CHHHHHHHHHHhCCeEEeeccccc
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLVQSTMD 172 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~ 172 (466)
..+.++.+|+....++....+++++.+........+++.+||||+++++.. ......++....|++..++....+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~G~r~~~~~~~~~ 154 (449)
T PRK08204 75 GADWTLQTYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSHINNSPEHADAAIRGLAEAGIRAVFAHGSPG 154 (449)
T ss_pred cCCCcHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecccccCChhHHHHHHHHHHHcCCeEEEEccccC
Confidence 777788999988888888888988888888888899999999999987532 234556778888999876555443
Q ss_pred CCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHH
Q 012333 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 252 (466)
.+. .+................+++....+..+.....++.+..++++.+.++++.|+++|+++++|+.+....
T Consensus 155 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~--- 227 (449)
T PRK08204 155 PSP----YWPFDSVPHPREDIRRVKKRYFSSDDGLLTLGLAIRGPEFSSWEVARADFRLARELGLPISMHQGFGPWG--- 227 (449)
T ss_pred CCC----CCCcchhhhhHHHHHHHHHhhccCCCCceEEEEecCCcccCCHHHHHHHHHHHHHcCCcEEEEEcCCCcc---
Confidence 221 2222223334444555556665544455666566677777888999999999999999999999875432
Q ss_pred HHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccC
Q 012333 253 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTD 331 (466)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD 331 (466)
......+.+...+.++.+..+.|+.++++++++++++.|+.+++||.+++.. .+..|++.++++|+++++|||
T Consensus 228 ------~~~~~~~~l~~~g~~~~~~~i~H~~~~~~~~~~~la~~g~~v~~~P~~~~~~g~~~~~~~~~~~~Gv~v~lGtD 301 (449)
T PRK08204 228 ------ATPRGVEQLHDAGLLGPDLNLVHGNDLSDDELKLLADSGGSFSVTPEIEMMMGHGYPVTGRLLAHGVRPSLGVD 301 (449)
T ss_pred ------cCCCHHHHHHHCCCCCCCeEEEecCCCCHHHHHHHHHcCCCEEEChHHHhhhcCCCCcHHHHHhcCCceeeccc
Confidence 1233566777788888889999999999999999999999999999988765 567899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHhccccccc----C-CCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEc
Q 012333 332 GAPSNNRMSIVDEMYLASLINKGREVFA----N-GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVD 406 (466)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d 406 (466)
+++. ...++|..++.+...++...... . .+....++++.++|+++|.++|+.+|+++++|+|++||.|||||+|
T Consensus 302 ~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~ADlvvld 380 (449)
T PRK08204 302 VVTS-TGGDMFTQMRFALQAERARDNAVHLREGGMPPPRLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQADLVLID 380 (449)
T ss_pred cCCC-CCcCHHHHHHHHHHHHHhhcccccccccccCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEc
Confidence 8643 35689999998876554321110 0 0112357999999999999999999998889999999999999999
Q ss_pred CCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 407 PFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
.+.+...|..+|+..+++.....+|..||++|++|++++++++++++++.++..+..
T Consensus 381 ~~~~~~~p~~dp~~~lv~~~~~~~v~~v~v~G~~v~~~~~~~~~d~~~~~~~~~~~~ 437 (449)
T PRK08204 381 ATDLNLAPVHDPVGAVVQSAHPGNVDSVMVAGRAVKRNGKLLGVDLERLRRLAAASR 437 (449)
T ss_pred CCCccccCCcChhhhheeccCCCCceEEEECCEEEEECCEeccCCHHHHHHHHHHHH
Confidence 998888899999988888888899999999999999999999999999998877654
No 9
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.2e-52 Score=408.04 Aligned_cols=420 Identities=36% Similarity=0.594 Sum_probs=349.5
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
|.+++|+|++|+++++ ..+.+++|.|++|+|++|++.... ++.++||++|++|+|||||+|+|+.++.+++.
T Consensus 1 ~~~~~~~~~~i~~~~~--~~~~~~~v~v~~g~I~~i~~~~~~------~~~~~id~~g~~v~PG~vd~H~H~~~~~~~g~ 72 (430)
T PRK06038 1 MADIIIKNAYVLTMDA--GDLKKGSVVIEDGTITEVSESTPG------DADTVIDAKGSVVMPGLVNTHTHAAMTLFRGY 72 (430)
T ss_pred CCCEEEEccEEEECCC--CeeeccEEEEECCEEEEecCCCCC------CCCEEEeCCCCEEecCeeecccCcchhhhhhc
Confidence 3568999999998663 345778999999999999985321 34579999999999999999999999988888
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCCCCC
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGL 177 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (466)
..+.++.+|+....|+....+++++.+......+.+++++||||++|+.. ......++..+.|+|...+....+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~-~~~~~~~a~~~~GiR~~~~~~~~d~~--- 148 (430)
T PRK06038 73 ADDLPLAEWLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMYF-YMDEVAKAVEESGLRAALSYGMIDLG--- 148 (430)
T ss_pred cCCCCHHHHHHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEcccc-CHHHHHHHHHHhCCeEEEEchhccCC---
Confidence 77789999998888887777888888888888999999999999999863 44566778889999987665443321
Q ss_pred CcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhc
Q 012333 178 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (466)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 257 (466)
........++...+.++.+.....+.+...++++.++.++++.+.++++.|+++|+++++|+.+............
T Consensus 149 ----~~~~~~~~l~~~~~~i~~~~~~~~g~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~ 224 (430)
T PRK06038 149 ----DDEKGEAELKEGKRFVKEWHGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLETEAELNQMKEQY 224 (430)
T ss_pred ----CccchHHHHHHHHHHHHHhcCCCCCceEEEEeCCcCccCCHHHHHHHHHHHHHcCCcEEEEcCCCHHHHHHHHHHh
Confidence 1112334455666667777654456778878889989999999999999999999999999999877666555544
Q ss_pred CCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCCCC
Q 012333 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN 336 (466)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~ 336 (466)
+. .+.+.++..++++.+.++.||.++++++++++++.|+.+++||.+++.. .+.+|++++++.|+++++|||+...+
T Consensus 225 G~--~~i~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~v~~~P~~n~~~~~~~~p~~~~~~~Gv~v~lGtD~~~~~ 302 (430)
T PRK06038 225 GM--CSVNYLDDIGFLGPDVLAAHCVWLSDGDIEILRERGVNVSHNPVSNMKLASGIAPVPKLLERGVNVSLGTDGCASN 302 (430)
T ss_pred CC--CHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHhcCCEEEEChHHhhhhccCCCCHHHHHHCCCeEEEeCCCCccC
Confidence 43 4788889999999999999999999999999999999999999999876 67889999999999999999987655
Q ss_pred CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcC
Q 012333 337 NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH 416 (466)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~ 416 (466)
...+++..++.+....+... ..+.++++.++++++|.+||+++|++ .|+|++|+.||||++|.+.....|..
T Consensus 303 ~~~d~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~aT~~gA~~lg~~--~G~l~~G~~ADlvvld~~~~~~~p~~ 374 (430)
T PRK06038 303 NNLDMFEEMKTAALLHKVNT------MDPTALPARQVLEMATVNGAKALGIN--TGMLKEGYLADIIIVDMNKPHLTPVR 374 (430)
T ss_pred CCcCHHHHHHHHHHHhhhcc------CCCCcCCHHHHHHHHhHHHHHHhCCC--CCccCCCcccCEEEEeCCCCccCCCC
Confidence 66789999998876655321 12346899999999999999999994 59999999999999999977677888
Q ss_pred CcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 417 DRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 417 ~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
++...+++.....+|..|||+|+++|++|+++.+|+.++.++..+..
T Consensus 375 ~~~~~~v~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~ 421 (430)
T PRK06038 375 DVPSHLVYSASGSDVDTTIVDGRILMEDYKVLCMDEQDVMEDAKKAA 421 (430)
T ss_pred ChHHheeEeCCCCceeEEEECCEEEEECCeECCCCHHHHHHHHHHHH
Confidence 88888888777889999999999999999999999999998877654
No 10
>PRK06380 metal-dependent hydrolase; Provisional
Probab=100.00 E-value=2.1e-52 Score=406.69 Aligned_cols=410 Identities=32% Similarity=0.511 Sum_probs=336.0
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
++++|+|+.|++.++. ..+.+++|+|++|+|++|++... .+.++||++|++|+|||||+|+|+.++..++..
T Consensus 1 m~~li~~~~v~~~~~~-~~~~~~~v~i~~g~I~~ig~~~~-------~~~~viD~~g~~v~PG~Vd~H~Hl~~~~~rg~~ 72 (418)
T PRK06380 1 MSILIKNAWIVTQNEK-REILQGNVYIEGNKIVYVGDVNE-------EADYIIDATGKVVMPGLINTHAHVGMTASKGLF 72 (418)
T ss_pred CeEEEEeeEEEECCCC-ceeeeeeEEEECCEEEEecCCCC-------CCCEEEECCCCEEccCEEeeccCCCccccCCcc
Confidence 3589999999987542 34568899999999999998532 245899999999999999999999999999888
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCCCCCC
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLP 178 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 178 (466)
.+.++.+|+.. .|+....+++++.+......+.+++++||||++|+.. ......++..+.|+|.+++...++....
T Consensus 73 ~~~~l~~~~~~-~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~~-~~~~~~~a~~~~G~r~~~~~~~~~~~~~-- 148 (418)
T PRK06380 73 DDVDLEEFLMK-TFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLYY-SEDIIAKAAEELGIRAFLSWAVLDEEIT-- 148 (418)
T ss_pred cCCCHHHHHHH-HHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEcccc-ChHHHHHHHHHhCCeEEEecccccCCcc--
Confidence 88889999987 6888888899988888888999999999999999863 3466778889999999887666543210
Q ss_pred cccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcC
Q 012333 179 ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~ 258 (466)
. ............++++.. ...+...+++++++.++++.+++++++|+++|+++++|+.+...+........
T Consensus 149 ~-----~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~- 220 (418)
T PRK06380 149 T-----QKGDPLNNAENFIREHRN--EELVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSETRKEVYDHVKRT- 220 (418)
T ss_pred c-----ccchHHHHHHHHHHHhcC--CCCeEEEEECCCCccCCHHHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHh-
Confidence 0 011122334444555442 35688888889999999999999999999999999999998765544333333
Q ss_pred CCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-c-CCccHHHHHHcCCcEEEccCCCCCC
Q 012333 259 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-L-GFAPIKEMLHADICVSLGTDGAPSN 336 (466)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~-~~~~~~~~~~~gi~~~~gsD~~~~~ 336 (466)
+..+.+.++.++.++.+.++.|+.++++++++++++.|+.+++||.++++. . +.+|++++++.|+++++|||....+
T Consensus 221 -g~~~ie~~~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~~g~~p~~~~~~~Gv~v~lGTD~~~~~ 299 (418)
T PRK06380 221 -GERPVEHLEKIGFLNSKLIAAHCVWATYHEIKLLSKNGVKVSWNSVSNFKLGTGGSPPIPEMLDNGINVTIGTDSNGSN 299 (418)
T ss_pred -CCCHHHHHHHCCCCCCCeEEEEeecCCHHHHHHHHHcCCEEEECHHHHHhhccCCCCcHHHHHHCCCeEEEcCCCCcCC
Confidence 345788999999999999999999999999999999999999999999876 3 6899999999999999999987655
Q ss_pred CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCC--
Q 012333 337 NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP-- 414 (466)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~-- 414 (466)
+..+++..++.+....+... ..+..++++++++++|.++|++||+ +.|+|++||.||||++|.+.....|
T Consensus 300 ~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~--~~G~l~~G~~ADlvv~d~~~~~~~p~~ 371 (418)
T PRK06380 300 NSLDMFEAMKFSALSVKNER------WDASIIKAQEILDFATINAAKALEL--NAGSIEVGKLADLVILDARAPNMIPTR 371 (418)
T ss_pred CCcCHHHHHHHHHHHhhhcc------CCCCcCCHHHHHHHHHHHHHHHhCC--CCCccCCCccCCEEEEeCCCCccCCCC
Confidence 66789999988765443221 1222489999999999999999999 3799999999999999998666667
Q ss_pred cCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHH
Q 012333 415 VHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQ 457 (466)
Q Consensus 415 ~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~ 457 (466)
..+|+..+++.....+|..|||+|++++++|+++++|+++++.
T Consensus 372 ~~~~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~ 414 (418)
T PRK06380 372 KNNIVSNIVYSLNPLNVDHVIVNGKILKENGRLNGFNPDEFID 414 (418)
T ss_pred ccChHHheeecCCCCceeEEEECCEEEEECCeECccCHHHHhh
Confidence 4678888988888899999999999999999999999998764
No 11
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=3.1e-52 Score=404.82 Aligned_cols=421 Identities=32% Similarity=0.532 Sum_probs=348.4
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
++++|+|++|+++++ ....+++|.|+||+|++|++.... ++.++||+.|++|+|||||+|+|++++.+++..
T Consensus 1 ~~~~i~~~~i~~~~~--~~~~~~~i~i~~g~I~~v~~~~~~------~~~~~id~~~~~v~Pg~vd~H~H~~~~~~rg~~ 72 (424)
T PRK08393 1 MSILIKNGYVIYGEN--LKVIRADVLIEGNKIVEVKRNINK------PADTVIDASGSVVSPGFINAHTHSPMVLLRGLA 72 (424)
T ss_pred CeEEEECcEEEeCCC--CceecceEEEECCEEEEecCCCCC------CCCeEEeCCCCEEccCeeeeccCcchHhhhhcc
Confidence 468999999997653 344667999999999999874321 245799999999999999999999999888888
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCCCCCC
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLP 178 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 178 (466)
.+.++.+|+....|+....+++++.+........+++++||||+.++. .......++....|++........+.. .
T Consensus 73 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~-~~~~~~~~a~~~~G~r~~~~~~~~~~~---~ 148 (424)
T PRK08393 73 DDVPLMEWLQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMY-FHMEEVAKATLEVGLRGYLSYGMVDLG---D 148 (424)
T ss_pred CCCCHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEeccc-cCHHHHHHHHHHhCCeEEEeceEecCC---C
Confidence 888999999988899887888888888888899999999999999976 345677888889999987765443321 1
Q ss_pred cccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcC
Q 012333 179 ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~ 258 (466)
+ ......++...+.++.++..+...+...++++.++.++++.++++++.++++|+++++|+.+...+........+
T Consensus 149 ~----~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g 224 (424)
T PRK08393 149 E----EKREKEIKETEKLMEFIEKLNSPRVHFVFGPHAPYTCSLALLKWVREKAREWNKLITIHLSETMDEIKQIREKYG 224 (424)
T ss_pred c----cchHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhC
Confidence 1 112333444445555555555566777778888888999999999999999999999999998877776666554
Q ss_pred CCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCCCCC
Q 012333 259 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN 337 (466)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~~ 337 (466)
..+...+...+.++.+.++.|+.++++++++++++.|+.+++||.++++. .+..|+++++++|+++++|||....+.
T Consensus 225 --~~~~~~l~~~G~l~~~~~~~H~~~l~~~~l~~la~~g~~v~~~P~sn~~lg~g~~~~~~~~~~Gv~v~lGtD~~~~~~ 302 (424)
T PRK08393 225 --KSPVVLLDEIGFLNEDVIAAHGVWLSSRDIRILASAGVTVAHNPASNMKLGSGVMPLRKLLNAGVNVALGTDGAASNN 302 (424)
T ss_pred --cCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHhcCCEEEECHHHHHhhccCCCCHHHHHHCCCcEEEecCCCccCC
Confidence 35788889999999999999999999999999999999999999998876 678899999999999999999876555
Q ss_pred CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCC
Q 012333 338 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHD 417 (466)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~ 417 (466)
..+++.+++.+....+... ..+..+++.++++++|.+||+++|++ .|+|++|++||||++|.+.....|..+
T Consensus 303 ~~d~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~aT~~~A~~lg~~--~G~l~~G~~ADlvvld~~~~~~~~~~~ 374 (424)
T PRK08393 303 NLDMLREMKLAALLHKVHN------LDPTIADAETVFRMATQNGAKALGLK--AGVIKEGYLADIAVIDFNRPHLRPINN 374 (424)
T ss_pred chhHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHHHHHHHHhCCC--CCccCCCCccCEEEEeCCCCCcCCCCC
Confidence 6789999998765544221 11233789999999999999999994 599999999999999999777778888
Q ss_pred cccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHhhc
Q 012333 418 RITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLMN 465 (466)
Q Consensus 418 ~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~~~ 465 (466)
+...+++.....+|..|||+|+++|++|+++.++.+++.+++.+..-+
T Consensus 375 ~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~~~ 422 (424)
T PRK08393 375 PISHLVYSANGNDVETTIVDGKIVMLDGEVLTLDEEKILDKFLKVIEK 422 (424)
T ss_pred hHHHeeeeCCCCCeeEEEECCEEEEECCeECCCCHHHHHHHHHHHHHh
Confidence 888888888888999999999999999999999999999988876554
No 12
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=100.00 E-value=3e-52 Score=408.92 Aligned_cols=428 Identities=30% Similarity=0.485 Sum_probs=343.5
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc--c
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI--A 98 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~--~ 98 (466)
+++.|+.|+++++...++.+++|+|+||+|++|++..+.+ .++.++||++|++|+|||||+|+|+++...++. .
T Consensus 4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~----~~~~~vID~~g~~v~PGlVn~H~H~~~~~~~g~~~~ 79 (451)
T PRK08203 4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALP----QPADEVFDARGHVVTPGLVNTHHHFYQTLTRALPAA 79 (451)
T ss_pred EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCC----CCCCeEEeCCCCEEecceEeccccccchhccccccc
Confidence 3445578999887556788999999999999999865421 135689999999999999999999999888877 5
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-------CHHHHHHHHHHhCCeEEeecccc
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACLVQSTM 171 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~ 171 (466)
.+.++.+|+.. .|+....+++++.+......+.+++++||||+++++.. ......++..+.|+|...+...+
T Consensus 80 ~~~~~~~~~~~-~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~ 158 (451)
T PRK08203 80 QDAELFPWLTT-LYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGMRFHATRGSM 158 (451)
T ss_pred CCCcHHHHHHH-HhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccccchHHHHHHHHHHcCCeEEEeccee
Confidence 66788899865 45666678888888888889999999999999997521 14566888899999998776554
Q ss_pred cCCC---CCCcccccCChHHHHHHHHHHHHHhccCCC-CCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCc
Q 012333 172 DCGE---GLPASWAVRTTDDCIQSQKELYAKHHHAAD-GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (466)
Q Consensus 172 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 247 (466)
+... +.++........+.++...+.++++..... +.+++.++++.++..+++.+.++++.|+++|+++++|+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~ 238 (451)
T PRK08203 159 SLGESDGGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRLGVRLHTHLAETL 238 (451)
T ss_pred ecCCccCCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCH
Confidence 3321 112222222344556666666666654332 567877888888899999999999999999999999998877
Q ss_pred chhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcE
Q 012333 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICV 326 (466)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~ 326 (466)
.+........+ ..+.+.+...++++.+.++.|+.++++++++++++.|+.+++||.+++++ .+.++++.+++.|+++
T Consensus 239 ~~~~~~~~~~g--~~~~~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~~~~~l~~~~~~~~~~~~~Gv~v 316 (451)
T PRK08203 239 DEEAFCLERFG--MRPVDYLEDLGWLGPDVWLAHCVHLDDAEIARLARTGTGVAHCPCSNMRLASGIAPVRELRAAGVPV 316 (451)
T ss_pred HHHHHHHHHhC--CCHHHHHHHcCCCCCCeEEEEEeCCCHHHHHHHHhcCCeEEECcHHhhhhccCCCCHHHHHHCCCeE
Confidence 76555554333 34788889999999999999999999999999999999999999998876 6788999999999999
Q ss_pred EEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEc
Q 012333 327 SLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVD 406 (466)
Q Consensus 327 ~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d 406 (466)
++|||++..+...+++.+++.+....+... ..+.+++.++++++|.+||+++|++ .+|+|++||.|||+|+|
T Consensus 317 ~lGtD~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~l~~~T~~~A~~lg~~-~~G~l~~G~~ADlvv~d 388 (451)
T PRK08203 317 GLGVDGSASNDGSNLIGEARQALLLQRLRY-------GPDAMTAREALEWATLGGARVLGRD-DIGSLAPGKLADLALFD 388 (451)
T ss_pred EEecCCCccCCCcCHHHHHHHHHHHhhccc-------CCCCCCHHHHHHHHHHHHHHHhCCC-CCCCcCCCCccCEEEEc
Confidence 999998765556789999887766554221 1235999999999999999999996 68999999999999999
Q ss_pred CCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHhh
Q 012333 407 PFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 464 (466)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~~ 464 (466)
.+.....|..+|+..+++.. ..+|..||++|++||++|+++++|++++.++..+...
T Consensus 389 ~~~~~~~~~~~p~~~l~~~~-~~~v~~v~v~G~~v~~~~~~~~~d~~~~~~~~~~~~~ 445 (451)
T PRK08203 389 LDELRFAGAHDPVAALVLCG-PPRADRVMVGGRWVVRDGQLTTLDLAALIARHRAAAR 445 (451)
T ss_pred CCccccCCccChHHHHHccC-CCCccEEEECCEEEEECCcccCCCHHHHHHHHHHHHH
Confidence 99766556677776665543 5789999999999999999999999999988876654
No 13
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.6e-51 Score=405.77 Aligned_cols=423 Identities=24% Similarity=0.346 Sum_probs=332.6
Q ss_pred eEEEEccEEEeecCCc-ceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 20 TMILHNAVIVTMDKES-RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 20 ~~lI~n~~i~~~d~~~-~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
.++|+|+.|++.++.. .++.+++|+|+||+|++|++... ....++||++|++|+|||||+|+|+.+.......
T Consensus 2 ~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~------~~~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~~~ 75 (488)
T PRK06151 2 RTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFD------GEVDRVIDAGNALVGPGFIDLDALSDLDTTILGL 75 (488)
T ss_pred eEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCC------CCCCeEEeCCCCEEecCEEeeecccchhhhhccc
Confidence 5899999999877644 46789999999999999997432 1245799999999999999999998754332221
Q ss_pred CCCCchHhhhhcccccc-------CCCChhHHHHHHHHHHHHHHhcCceeeeecCcc----------CHHHHHHHHHHhC
Q 012333 99 DDVDLMTWLHDRIWPYE-------SNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----------HVSEMAKAVELLG 161 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~----------~~~~~~~~~~~~g 161 (466)
. +..+|+.+..|+.. ..+++++.+......+.+++++||||++|++.. ......++....|
T Consensus 76 ~--~~~~~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~G 153 (488)
T PRK06151 76 D--NGPGWAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRLG 153 (488)
T ss_pred c--cchhHHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHcC
Confidence 1 12266655555532 357888888898999999999999999986431 1345567778899
Q ss_pred CeEEeecccccCCCCC------CcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHc
Q 012333 162 LRACLVQSTMDCGEGL------PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (466)
Q Consensus 162 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~ 235 (466)
+|...+...+..+... .+.+......+.+.+..+.++++...+.+.++..+.++..+.++++.+.++++.|+++
T Consensus 154 iR~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p~~~~~~s~e~l~~~~~~A~~~ 233 (488)
T PRK06151 154 LRVYLGPAYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRTAAAAREL 233 (488)
T ss_pred CeEEecchhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceEEEEcCCCCCCCCHHHHHHHHHHHHHC
Confidence 9987776544322111 0111111233445666777777776666778888888888889999999999999999
Q ss_pred CCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh---------hhHHHHHhcCCeEEECccc
Q 012333 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH---------TEIGLLSRAGVKVSHCPAS 306 (466)
Q Consensus 236 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~---------~~~~~~~~~g~~~~~~p~~ 306 (466)
|+++++|+.+...+........+ ....+.+...+.++.+.+++|+.++++ ++++++++.|+.+++||.+
T Consensus 234 g~~v~~H~~e~~~~~~~~~~~~g--~~~~~~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~~~~~~la~~g~~v~~~P~~ 311 (488)
T PRK06151 234 GCPVRLHCAQGVLEVETVRRLHG--TTPLEWLADVGLLGPRLLIPHATYISGSPRLNYSGGDDLALLAEHGVSIVHCPLV 311 (488)
T ss_pred CCcEEEEECCchHHHHHHHHHcC--CCHHHHHHHcCCCCCCcEEEEEEEcCCccccccCCHHHHHHHHhcCCEEEECchh
Confidence 99999999887665555444333 347788888898899999999999999 9999999999999999998
Q ss_pred hhhc-cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 012333 307 AMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (466)
Q Consensus 307 ~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 385 (466)
+.+. .+.++++.+++.|+++++|||..+ .+++..++.+....+... .....++++++++++|.+||+++
T Consensus 312 ~~~~g~~~~p~~~l~~~Gv~v~lGtD~~~----~~~~~~~~~~~~~~~~~~------~~~~~~~~~~al~~aT~~~A~~l 381 (488)
T PRK06151 312 SARHGSALNSFDRYREAGINLALGTDTFP----PDMVMNMRVGLILGRVVE------GDLDAASAADLFDAATLGGARAL 381 (488)
T ss_pred hhhhccccccHHHHHHCCCcEEEECCCCC----ccHHHHHHHHHHHHHHhc------CCCCCCCHHHHHHHHHHHHHHHh
Confidence 8765 677899999999999999999743 378888887765543221 11234899999999999999999
Q ss_pred CCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 386 LWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 386 gl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
|+++ +|+|++|+.|||+|+|.+.+...|..+++..+++.....+|..||++|++||++|+++.+++++++....+..
T Consensus 382 g~~~-~G~I~~G~~ADlvvld~~~~~~~~~~d~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~ 458 (488)
T PRK06151 382 GRDD-LGRLAPGAKADIVVFDLDGLHMGPVFDPIRTLVTGGSGRDVRAVFVDGRVVMEDGRLPGVDLAALRAQAQQQF 458 (488)
T ss_pred CCCC-CcccCCCCcCCEEEEeCCccccCCccCHHHHHHhhCCCCCccEEEECCEEEEECCeecCCCHHHHHHHHHHHH
Confidence 9965 7999999999999999998877788888888888887789999999999999999999999999998877554
No 14
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=100.00 E-value=1.5e-49 Score=388.39 Aligned_cols=410 Identities=41% Similarity=0.661 Sum_probs=322.0
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|+++++ .+.+.+++|+|+||||++|++..+.+ .+ ++.++||++|++|+|||||+|+|+.++..++....
T Consensus 1 ~~i~~~~v~~~~~-~~~~~~~~v~i~~g~I~~ig~~~~~~--~~-~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~~~ 76 (411)
T cd01298 1 ILIRNGTIVTTDP-RRVLEDGDVLVEDGRIVAVGPALPLP--AY-PADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADD 76 (411)
T ss_pred CeEEeeEEEEeCC-cceeecceEEEECCEEEEecCccccc--cC-CcCeEEeCCCCEEccCccccccchhhHHhhcccCC
Confidence 4899999998765 56778999999999999999854321 11 25689999999999999999999988777666666
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCCCCCCcc
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (466)
.++.+|+....+......+.++.+......+.+++.+||||+++++........++....|++.......+.....
T Consensus 77 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~---- 152 (411)
T cd01298 77 LPLMEWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMYFFYPDAVAEAAEELGIRAVLGRGIMDLGTE---- 152 (411)
T ss_pred CCHHHHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECccccchHHHHHHHHHhCCeEEEEcceecCCCc----
Confidence 6789999988887766677777777777788889999999999987543345566677788888766555432211
Q ss_pred cccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCC
Q 012333 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (466)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~ 260 (466)
. ........++..+.++++...+...+++.++++.....+++.+.++++.|+++|+++.+|+.+............+.
T Consensus 153 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~- 230 (411)
T cd01298 153 D-VEETEEALAEAERLIREWHGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETEDEVEESLEKYGK- 230 (411)
T ss_pred c-cccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCccCCHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHhCC-
Confidence 1 12334455666666766655455677887887777778899999999999999999999998776555444433332
Q ss_pred CchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCCCCCCC
Q 012333 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRM 339 (466)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~~~~ 339 (466)
...+.+...+..+.+..+.|+.++++++++++++.|+.+++||.++... ...+++++++++|+++++|||+++.....
T Consensus 231 -~~~~~~~~~~~~~~~~~i~H~~~l~~~~~~~l~~~gi~~~~~p~~~~~~~~~~~~~~~~~~~Gv~~~~GsD~~~~~~~~ 309 (411)
T cd01298 231 -RPVEYLEELGLLGPDVVLAHCVWLTDEEIELLAETGTGVAHNPASNMKLASGIAPVPEMLEAGVNVGLGTDGAASNNNL 309 (411)
T ss_pred -CHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChHHhhhhhhCCCCHHHHHHCCCcEEEeCCCCccCCCc
Confidence 2555566667777788999999999999999999999999999988765 46789999999999999999997655556
Q ss_pred CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcc
Q 012333 340 SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRI 419 (466)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~ 419 (466)
+++.+++.+....+.. ...+++++++++++++|.|||+++|++ ++|+|++|+.|||||+|.+.+...+.+++.
T Consensus 310 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~al~~~T~~~A~~lg~~-~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~ 382 (411)
T cd01298 310 DMFEEMRLAALLQKLA------HGDPTALPAEEALEMATIGGAKALGLD-EIGSLEVGKKADLILIDLDGPHLLPVHDPI 382 (411)
T ss_pred CHHHHHHHHHHHhccc------cCCCCcCCHHHHHHHHHhhHHHHhCCc-cCCCcCCCccCCEEEEeCCCCccCCccchh
Confidence 8888888765554321 112245999999999999999999997 789999999999999999966555667776
Q ss_pred cceecccCCCCeeEEEEccEEEEECCeee
Q 012333 420 TSLVYCMRTENVVSVMCNGQWVMKNKKIL 448 (466)
Q Consensus 420 ~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 448 (466)
+.+.+.....+|..||++|++||++|+++
T Consensus 383 ~~~~~~~~~~~v~~v~~~G~~v~~~~~~~ 411 (411)
T cd01298 383 SHLVYSANGGDVDTVIVNGRVVMEDGELL 411 (411)
T ss_pred hHheEecCCCCeeEEEECCEEEEECCEeC
Confidence 76666666789999999999999999864
No 15
>PRK09228 guanine deaminase; Provisional
Probab=100.00 E-value=6.5e-50 Score=387.96 Aligned_cols=409 Identities=23% Similarity=0.311 Sum_probs=325.2
Q ss_pred ceEEEEccEEEe-ec-------CCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCc
Q 012333 19 STMILHNAVIVT-MD-------KESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (466)
Q Consensus 19 ~~~lI~n~~i~~-~d-------~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~ 90 (466)
...+|++..|+. .. ....++++++|+|++|+|++|++..+....++. ..++||++|++|+|||||+|+|+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~I~~g~I~~Vg~~~~~~~~~~~-~~~viD~~g~lv~PGlVn~H~H~~ 80 (433)
T PRK09228 2 TTKAYRGRLLHFTADPAEVDDEDALRYIEDGLLLVEDGRIVAAGPYAELRAQLPA-DAEVTDYRGKLILPGFIDTHIHYP 80 (433)
T ss_pred ceEEEEEEEEccCCCccccCCCCcEEEECCeEEEEECCEEEEEcChHHhhhhcCC-CCeEEeCCCCEEecceeccccccc
Confidence 346777666662 22 234577899999999999999986543322221 358999999999999999999998
Q ss_pred ccccccccCCCCchHhhhhccccccCCC-ChhHHHHHHHHHHHHHHhcCceeeeecCccC---HHHHHHHHHHhCCeEEe
Q 012333 91 QQLAKGIADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACL 166 (466)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~---~~~~~~~~~~~g~~~~~ 166 (466)
++.+++. .+.++.+|+....|+.+..+ ++++.+......+.+++++||||+++++... .....++..+.|+|...
T Consensus 81 ~~~~~g~-~~~~l~~wl~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~ 159 (433)
T PRK09228 81 QTDMIAS-YGEQLLDWLNTYTFPEERRFADPAYAREVAEFFLDELLRNGTTTALVFGTVHPQSVDALFEAAEARNMRMIA 159 (433)
T ss_pred chhhccC-CchHHHHHHHhhhhHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEeccccCHHHHHHHHHHHHHcCCeEEe
Confidence 8877764 34468899988788876543 5556666777788999999999999975433 35667778889999988
Q ss_pred ecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHc-CCccceeccC
Q 012333 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAE 245 (466)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~-~~~v~~H~~~ 245 (466)
+...++.. .+. .........+....+.++++... ..+.+.+.++..+.++++.++++.++|+++ ++++++|+.+
T Consensus 160 ~~~~~~~~--~~~-~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~~i~~Hl~E 234 (433)
T PRK09228 160 GKVLMDRN--APD-GLRDTAESGYDDSKALIERWHGK--GRLLYAITPRFAPTSTPEQLEAAGALAREHPDVWIQTHLSE 234 (433)
T ss_pred eeeeecCC--CCc-ccccCHHHHHHHHHHHHHHHhCC--CCceEEEECCcCCcCCHHHHHHHHHHHHHCCCCceEEeecC
Confidence 76665431 111 11122344455556666666543 467788889999999999999999999998 9999999999
Q ss_pred CcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCC
Q 012333 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADI 324 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi 324 (466)
+..+........+......+.++..++++.+.++.|+.++++++++++++.|+.+++||.+++++ .+.+++..+++.|+
T Consensus 235 ~~~e~~~~~~~~g~~~~~~~~l~~~G~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g~~~~~~~~~~Gv 314 (433)
T PRK09228 235 NLDEIAWVKELFPEARDYLDVYERYGLLGPRAVFAHCIHLEDRERRRLAETGAAIAFCPTSNLFLGSGLFDLKRADAAGV 314 (433)
T ss_pred ChhHHHHHHHHcCCCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCeEEECCccHHhhcCCCcCHHHHHHCCC
Confidence 98887777776665555788999999999999999999999999999999999999999999876 67899999999999
Q ss_pred cEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEE
Q 012333 325 CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 404 (466)
Q Consensus 325 ~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv 404 (466)
++++|||... ++..+++..|+.+....+. ....++++++|+++|.+||+++|+++++|+|++||.||||+
T Consensus 315 ~v~lGtD~~~-~~~~d~~~~~~~~~~~~~~---------~~~~~~~~~~l~~aT~~~A~~lg~~~~~G~l~~Gk~ADlvv 384 (433)
T PRK09228 315 RVGLGTDVGG-GTSFSMLQTMNEAYKVQQL---------QGYRLSPFQAFYLATLGGARALGLDDRIGNLAPGKEADFVV 384 (433)
T ss_pred eEEEecCCCC-CCCCCHHHHHHHHHHHhhc---------ccCCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCCCCEEE
Confidence 9999999854 3457899999887766542 12358999999999999999999987789999999999999
Q ss_pred EcCCC-CCCC-------CcCCcccceecccCCCCeeEEEEccEEEEEC
Q 012333 405 VDPFS-WPMV-------PVHDRITSLVYCMRTENVVSVMCNGQWVMKN 444 (466)
Q Consensus 405 ~d~~~-~~~~-------~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~ 444 (466)
+|.+. +... +..|++..+++......|+.|||+|++|+++
T Consensus 385 ~d~~~~~~~~~~~~~~~~~~d~~~~lv~~~~~~~V~~v~VdG~~v~~~ 432 (433)
T PRK09228 385 LDPAATPLLALRTARAESLEELLFALMTLGDDRAVAETYVAGRPVYRR 432 (433)
T ss_pred EcCCCCccccchhcccCCHHHHHHHHhhcCCccceeEEEECCEEeccC
Confidence 99884 3322 2367889999999999999999999999874
No 16
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=100.00 E-value=1.4e-49 Score=385.92 Aligned_cols=402 Identities=25% Similarity=0.358 Sum_probs=322.5
Q ss_pred EEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCCCCchHhh
Q 012333 28 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWL 107 (466)
Q Consensus 28 i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~ 107 (466)
+.++|....++++++|+|++|+|++||+..+.....+ +++++||++|++|+|||||+|+|++++.+++...+.++.+|+
T Consensus 14 ~~~~d~~~~~~~~g~V~v~~g~I~~vG~~~~~~~~~~-~~~~viD~~g~~v~PGlVn~H~Hl~~~~~rg~~~~~~l~~wl 92 (429)
T cd01303 14 LELVEDALRVVEDGLIVVVDGNIIAAGAAETLKRAAK-PGARVIDSPNQFILPGFIDTHIHAPQYANIGSGLGEPLLDWL 92 (429)
T ss_pred ccccCCcEEEECCeEEEEECCEEEEeCchhhhhhhcC-CCceEEcCCCCEEecceeeeeecccccccccccCCCcHHHHH
Confidence 3456776778899999999999999998654321112 256899999999999999999999999989887888999999
Q ss_pred hhccccccCC-CChhHHHHHHHHHHHHHHhcCceeeeecCcc---CHHHHHHHHHHhCCeEEeecccccCCCCCCccccc
Q 012333 108 HDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAV 183 (466)
Q Consensus 108 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 183 (466)
....|+.+.. .+.++.+......+.+++++||||+++++.. ......++..+.|+|..++...++... + ....
T Consensus 93 ~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~--~-~~~~ 169 (429)
T cd01303 93 ETYTFPEEAKFADPAYAREVYGRFLDELLRNGTTTACYFATIHPESTEALFEEAAKRGQRAIAGKVCMDRNA--P-EYYR 169 (429)
T ss_pred HhhhhHHHHhcCCHHHHHHHHHHHHHHHHhCCceEEEeecccChhHHHHHHHHHHHhCCeEEEeeeeecCCC--C-cccc
Confidence 8888887665 3555666667778889999999999997643 345667788899999988766554321 1 1111
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcC-CccceeccCCcchhHHHHhhcCCCCc
Q 012333 184 RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHG 262 (466)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~-~~v~~H~~~~~~~~~~~~~~~~~~~~ 262 (466)
......+....++++.+... .+.+...++++..+.++++.+++++++|++++ +++++|+.+...+........+....
T Consensus 170 ~~~~~~~~~~~~~i~~~~~~-~~~v~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~e~~~~~~~~g~~~~ 248 (429)
T cd01303 170 DTAESSYRDTKRLIERWHGK-SGRVKPAITPRFAPSCSEELLAALGKLAKEHPDLHIQTHISENLDEIAWVKELFPGARD 248 (429)
T ss_pred cCHHHHHHHHHHHHHHHhCc-CCceEEEEecCcCCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHHHHHHHHHHcCCCCC
Confidence 22334455566666666543 35677778889999999999999999999999 99999999887776666665553356
Q ss_pred hHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCCCCCCCCH
Q 012333 263 TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSI 341 (466)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~ 341 (466)
+.+.++..++++.+.++.||.++++++++++++.|+.+++||.+++.+ .+..+++++++.|+++++|||+.+. ...++
T Consensus 249 p~~~l~~~G~l~~~~~l~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~l~~g~~~~~~~~~~Gv~v~lGtD~~~~-~~~d~ 327 (429)
T cd01303 249 YLDVYDKYGLLTEKTVLAHCVHLSEEEFNLLKERGASVAHCPTSNLFLGSGLFDVRKLLDAGIKVGLGTDVGGG-TSFSM 327 (429)
T ss_pred HHHHHHHCCCCCCCcEEEeCCCCCHHHHHHHHHcCCEEEECccchhhhccCCCCHHHHHHCCCeEEEeccCCCC-CCccH
Confidence 889999999999999999999999999999999999999999999876 6788999999999999999998644 45689
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCC-Cc-----
Q 012333 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV-PV----- 415 (466)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~-~~----- 415 (466)
++.++.+....+.... ....+.+++++++++++|.+||+++|+++++|+|++||.|||||+|.+.+... |.
T Consensus 328 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~al~~aT~~gA~~lg~~~~~Gsle~Gk~ADlvvld~~~~~~~~p~~~~~~ 404 (429)
T cd01303 328 LDTLRQAYKVSRLLGY---ELGGHAKLSPAEAFYLATLGGAEALGLDDKIGNFEVGKEFDAVVIDPSATPLLADRMFRVE 404 (429)
T ss_pred HHHHHHHHHHHHhhcc---ccCCcCCCCHHHHHHHHhhHHHHHcCCCCCCcCcCCCCccCEEEEcCCCcccccccccccc
Confidence 9999987665442210 01134568999999999999999999988899999999999999999965333 53
Q ss_pred --CCcccceecccCCCCeeEEEEcc
Q 012333 416 --HDRITSLVYCMRTENVVSVMCNG 438 (466)
Q Consensus 416 --~~~~~~~~~~~~~~~v~~v~v~G 438 (466)
.||+..++|......|+.|||+|
T Consensus 405 ~~~d~~~~lV~~~~~~~V~~v~V~G 429 (429)
T cd01303 405 SLEEALFKFLYLGDDRNIREVYVAG 429 (429)
T ss_pred chhhHHHHHeeeCCCCCeeEEEeCC
Confidence 68999999999999999999998
No 17
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=100.00 E-value=6.3e-49 Score=384.83 Aligned_cols=418 Identities=19% Similarity=0.235 Sum_probs=319.6
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEEC-CEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQ-DRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~-G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
..++++++.+. ++ +..+++|+|++ |+|++|++.... + .++.+|++|+|||||+|+|+.++.+++.
T Consensus 3 ~~~~~~~~~~~--~~---~~~~~~v~i~~~grI~~vg~~~~~------~---~~~~~g~~vlPGlVn~H~H~~~~~~rg~ 68 (456)
T PRK09229 3 TTLFAERALLP--DG---WARNVRLTVDADGRIAAVEPGAAP------A---GAERLAGPVLPGMPNLHSHAFQRAMAGL 68 (456)
T ss_pred hhHHHHHhhCC--Cc---cccCcEEEEecCCeEEEecCCCCC------c---cccccCcEEccCcccccccHhhHhhcCc
Confidence 34556666663 33 56788999999 999999985321 1 2345899999999999999999999987
Q ss_pred cCC-----CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc--------------CHHHHHHHHH
Q 012333 98 ADD-----VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVE 158 (466)
Q Consensus 98 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~--------------~~~~~~~~~~ 158 (466)
..+ .++.+|+. ..|+....+++++.+......+.+++++||||+.++... ......++..
T Consensus 69 ~~~~~~~~~~l~~w~~-~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~ 147 (456)
T PRK09229 69 TEVRGPPQDSFWSWRE-LMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFHYLHHDPDGTPYADPAEMALRIVAAAR 147 (456)
T ss_pred ccccCCCCCChHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeeeeeccCCCCCccCChHHHHHHHHHHHH
Confidence 653 45678975 457777788999999999999999999999999886421 1256788889
Q ss_pred HhCCeEEeecccccCC-C-CCCccc----ccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHH
Q 012333 159 LLGLRACLVQSTMDCG-E-GLPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (466)
Q Consensus 159 ~~g~~~~~~~~~~~~~-~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a 232 (466)
+.|+|..++...++.. . +.++.. ............++..+.++. .+.+.+.++++.++.++++.+++++++|
T Consensus 148 e~GiR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~~A 225 (456)
T PRK09229 148 AAGIGLTLLPVLYAHSGFGGQPPNPGQRRFINDPDGFLRLLEALRRALAA--LPGARLGLAPHSLRAVTPDQLAAVLALA 225 (456)
T ss_pred HcCCEEEeceeeeecCCCCCCCCchhhcccccCHHHHHHHHHHHHHhhcC--CCceEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 9999987766555422 1 112110 011122222222233333322 3568888889988899999999999999
Q ss_pred HHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-c
Q 012333 233 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-L 311 (466)
Q Consensus 233 ~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~ 311 (466)
++|+++++|+.+...+........+ ..+.+.+...+.++.+.++.||.++++++++++++.|+.+++||.+++++ .
T Consensus 226 -~~g~~i~~H~~e~~~e~~~~~~~~g--~~~~~~l~~~g~l~~~~~l~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~ 302 (456)
T PRK09229 226 -APDGPVHIHIAEQTKEVDDCLAWSG--ARPVEWLLDHAPVDARWCLVHATHLTDAETARLARSGAVAGLCPTTEANLGD 302 (456)
T ss_pred -cCCCceEEEeCCCHHHHHHHHHHcC--CCHHHHHHHcCCCCCCeEEEeeccCCHHHHHHHHHcCCeEEECchhhhhhcC
Confidence 9999999999887766555555443 44778888899999999999999999999999999999999999998876 6
Q ss_pred CCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCC-CCCCCCHHHHHHHHhHHHHHHcCCCCc
Q 012333 312 GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT-DPAALPAETVLRMATINGAKSVLWDND 390 (466)
Q Consensus 312 ~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ls~~~al~~~T~~~A~~lgl~~~ 390 (466)
+.+|+++++++|+++++|||++. ..+++..++.+...++.......... ..+.+++.++|+++|.++|+++|+ .
T Consensus 303 g~~p~~~l~~~Gv~v~lGtD~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~--~ 377 (456)
T PRK09229 303 GIFPAVDYLAAGGRFGIGSDSHV---SIDLVEELRLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGR--A 377 (456)
T ss_pred CCCCHHHHHHCCCeEEEecCCCC---CCCHHHHHHHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCC--C
Confidence 78999999999999999999754 35899999988765543211111111 114689999999999999999999 4
Q ss_pred ccccccCCccCEEEEcCCCCCCCCc--CCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 391 IGSLEAGKKADMVVVDPFSWPMVPV--HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 391 ~G~i~~G~~ADlvv~d~~~~~~~~~--~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
+|+|++||.|||||+|.+.+...|. +++...+++.....+|..|||+|++||++|+++ +.+++.+++++..
T Consensus 378 ~GsLe~Gk~ADlvvld~~~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~~g~~~--d~~~i~~~~~~~~ 450 (456)
T PRK09229 378 IGGLAVGARADLVVLDLDHPALAGREGDALLDRWVFAGGDAAVRDVWVAGRWVVRDGRHR--LREAIAAAFRAAL 450 (456)
T ss_pred cCCcCCCCccCEEEEeCCCccccCCChhhHHHHHhhcCCCCCeeEEEECCEEEEECCccC--CHHHHHHHHHHHH
Confidence 8999999999999999986544443 678888888888899999999999999999965 7788887776543
No 18
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=100.00 E-value=1.4e-47 Score=371.04 Aligned_cols=385 Identities=24% Similarity=0.380 Sum_probs=308.9
Q ss_pred eeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCCCCchHhhhhccccccC
Q 012333 37 VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYES 116 (466)
Q Consensus 37 ~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (466)
++.+++|+|+||+|++|++..+....++ .+.++||++|++|+|||||+|+|+++...++ ....++.+|+....|+.+.
T Consensus 3 ~~~~~~V~V~~g~I~~Vg~~~~~~~~~~-~~~~viD~~g~~v~PGlId~H~Hl~~~~~~g-~~~~~~~~~~~~~~~~~~~ 80 (401)
T TIGR02967 3 YFEDGLLVVENGRIVAVGDYAELKETLP-AGVEIDDYRGHLIMPGFIDTHIHYPQTEMIA-SYGEQLLEWLEKYTFPTEA 80 (401)
T ss_pred EEeceEEEEECCEEEEecCcchhhhccC-CCCeEEeCCCCEEecceeecccCchhhhhcc-cCCchHHHHHhhCcCcccc
Confidence 3567899999999999998654322222 2568999999999999999999998887777 4566788999877676665
Q ss_pred CC-ChhHHHHHHHHHHHHHHhcCceeeeecCccCH---HHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHH
Q 012333 117 NM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 192 (466)
Q Consensus 117 ~~-~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (466)
.+ +++..+......+.+++++||||+++++..+. ....++..+.|+|...+...++.. .+. .........++.
T Consensus 81 ~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~d~~--~~~-~~~~~~~~~~~~ 157 (401)
T TIGR02967 81 RFADPDHAEEVAEFFLDELLRNGTTTALVFATVHPESVDALFEAALKRGMRMIAGKVLMDRN--APD-YLRDTAESSYDE 157 (401)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCcEEEeccccCHHHHHHHHHHHHHCCCeEEEeeeeecCC--CCc-ccccCHHHHHHH
Confidence 53 55566666777888999999999999875442 456778889999987766655421 121 112223444555
Q ss_pred HHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHc-CCccceeccCCcchhHHHHhhcCCCCchHHHHhhhc
Q 012333 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE 271 (466)
Q Consensus 193 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (466)
..+.++++... +.++..+.++..+.++++.+++++++|+++ |+++++|+.+...+........+......+.++..+
T Consensus 158 ~~~~i~~~~~~--g~i~~~~~~~~~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~~~l~~~g 235 (401)
T TIGR02967 158 SKALIERWHGK--GRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKELFPEAKDYLDVYDHYG 235 (401)
T ss_pred HHHHHHHHhCc--CCceEEEECCcCCcCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHHHcCCCCcHHHHHHHCC
Confidence 66666665542 467777888888899999999999999999 999999999888777777766665555688999999
Q ss_pred cCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHH
Q 012333 272 FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASL 350 (466)
Q Consensus 272 ~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~ 350 (466)
+++.+.++.|+.++++++++++++.|+.+++||.++++. .+.++++.++++|+++++|||+... ...++++.++.+..
T Consensus 236 ~lg~~~~~~H~~~~~~~~~~~l~~~g~~v~~~P~~~~~~~~g~~~~~~~~~~Gv~v~lGtD~~~~-~~~~~~~~~~~~~~ 314 (401)
T TIGR02967 236 LLGRRSVFAHCIHLSDEECQRLAETGAAIAHCPTSNLFLGSGLFNLKKALEHGVRVGLGTDVGGG-TSFSMLQTLREAYK 314 (401)
T ss_pred CCCCCeEEEecccCCHHHHHHHHHcCCeEEEChHHHHHhccCCCCHHHHHHCCCeEEEecCCCCC-CCcCHHHHHHHHHH
Confidence 999999999999999999999999999999999998876 6788999999999999999998643 45689999888766
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCC--------cCCcccce
Q 012333 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP--------VHDRITSL 422 (466)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~--------~~~~~~~~ 422 (466)
..+.. ..++++.++++++|.+||+.+|+++++|+|++|+.|||+++|.+.....| ..||...+
T Consensus 315 ~~~~~---------~~~~~~~~~l~~aT~~~A~~lg~~~~~G~i~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~~~~~~~ 385 (401)
T TIGR02967 315 VSQLQ---------GARLSPFEAFYLATLGGARALDLDDRIGNFEPGKEADFVVLDPAATPLLALRFEGADTLEDKLFKL 385 (401)
T ss_pred Hhhhc---------CCCCCHHHHHHHHHHHHHHHhCCcCCccccCCCCccCEEEEcCCCCcccccccccccchhhHHHHh
Confidence 54422 13589999999999999999999878999999999999999998655443 46899999
Q ss_pred ecccCCCCeeEEEEcc
Q 012333 423 VYCMRTENVVSVMCNG 438 (466)
Q Consensus 423 ~~~~~~~~v~~v~v~G 438 (466)
+|......|..|||+|
T Consensus 386 v~~~~~~~v~~v~v~G 401 (401)
T TIGR02967 386 MYLGDDRNVAETYVAG 401 (401)
T ss_pred eeecCccceeEEEeCC
Confidence 9999999999999998
No 19
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=100.00 E-value=2e-47 Score=372.89 Aligned_cols=414 Identities=18% Similarity=0.238 Sum_probs=315.4
Q ss_pred EEccEEEeecCCcceeeceEEEEE-CCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccC--
Q 012333 23 LHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-- 99 (466)
Q Consensus 23 I~n~~i~~~d~~~~~~~~~~v~I~-~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~-- 99 (466)
++|+.+- ++ +..+.+|+|+ ||+|++|++.... + +. .+..|++|+|||||+|+|++++.+++...
T Consensus 6 ~~~~~~~--~~---~~~~~~i~I~~~g~I~~vg~~~~~----~-~~---~~~~g~lvlPGfVn~H~H~~~~~~rg~~~~~ 72 (455)
T TIGR02022 6 AERALLP--DG---WAEGVRIAVAADGRILAIETGVPA----A-PG---AERLSGPLLPGLANLHSHAFQRAMAGLAEVA 72 (455)
T ss_pred HHhccCC--Cc---cccCceEEEecCCEEEEecCCCCc----c-cc---cccCCCEEccCCcccCcchhhHhhcCCcccc
Confidence 4555553 32 4467799999 9999999985321 1 12 23458899999999999999999998754
Q ss_pred ---CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc--------------CHHHHHHHHHHhCC
Q 012333 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVELLGL 162 (466)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~--------------~~~~~~~~~~~~g~ 162 (466)
+.++.+|+. ..|+....+++++.+......+.+++++||||+.++... ......++..+.|+
T Consensus 73 ~~~~~~l~~w~~-~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~G~ 151 (455)
T TIGR02022 73 GSGGDSFWTWRE-LMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFHYLHHAPDGTPYADPAEMAERIAAAAADAGI 151 (455)
T ss_pred cCCCCCHHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeeeeecccCCCccccchhhhHHHHHHHHHHhCC
Confidence 246788975 567777789999999999999999999999999985311 13567888899999
Q ss_pred eEEeecccccCCC--CCCccc----ccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcC
Q 012333 163 RACLVQSTMDCGE--GLPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (466)
Q Consensus 163 ~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 236 (466)
|..+...+++... +.++.. ................+.++. .+.+...++++.++.++++.+.++.+ +++++
T Consensus 152 R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~-a~~~g 228 (455)
T TIGR02022 152 GLTLLPVFYAHSGFGGAAPNPGQRRFIHDVERFARLVEVLRRELAA--QPAAVLGLAPHSLRAVTPEQLAAVLQ-ASDRQ 228 (455)
T ss_pred eEEeeeeeeecCCCCCCCCcccchhhccCHHHHHHHHHHHHHHhcc--CCceEEEEecCCCCcCCHHHHHHHHH-HHhCC
Confidence 9877665543211 122110 011122222222222222222 24577778888888999999999999 88999
Q ss_pred CccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCcc
Q 012333 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAP 315 (466)
Q Consensus 237 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~ 315 (466)
+++++|+.+...+........+ ..+.+.++..+.++.+.++.||.++++++++++++.|+.+++||.+++++ .+.+|
T Consensus 229 ~~v~~H~~e~~~e~~~~~~~~G--~~~v~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g~~p 306 (455)
T TIGR02022 229 APVHIHVAEQQKEVDDCLAWSG--RRPVEWLLDHGPVDARWCLVHATHLTDEETALLARSGAVAGLCPTTEANLGDGIFP 306 (455)
T ss_pred CceEEEECCChHHHHHHHHHhC--CCHHHHHHHcCCCCCCEEEEEeecCCHHHHHHHHHcCCeEEEChhhhccccCCCCC
Confidence 9999999988777666655544 45789999999999999999999999999999999999999999999877 67899
Q ss_pred HHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCC-CCCCCCCHHHHHHHHhHHHHHHcCCCCccccc
Q 012333 316 IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT-TDPAALPAETVLRMATINGAKSVLWDNDIGSL 394 (466)
Q Consensus 316 ~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i 394 (466)
+++++++|+++++|||+.. ..+++++|+.+...++......... ..+..++.+++++++|.++|+++|+ + .|+|
T Consensus 307 i~~l~~~Gv~v~lGTD~~~---~~d~~~~m~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~-~-~GsL 381 (455)
T TIGR02022 307 AVDFVAAGGRFGIGSDSHV---VIDVAEELRQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGL-A-TGGL 381 (455)
T ss_pred HHHHHHCCCeEEEECCCCC---CCCHHHHHHHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCC-C-CCcc
Confidence 9999999999999999743 3689999998876655321100000 1123578899999999999999999 4 8999
Q ss_pred ccCCccCEEEEcCCCCCCCCc--CCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHH
Q 012333 395 EAGKKADMVVVDPFSWPMVPV--HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 462 (466)
Q Consensus 395 ~~G~~ADlvv~d~~~~~~~~~--~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 462 (466)
++||.|||||+|.+.+...|. .++...+++.....+|..|||+|++|+++|+++ +.+++.+.+.+.
T Consensus 382 e~Gk~ADlvvld~~~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~~g~~~--~~~~~~~~~~~~ 449 (455)
T TIGR02022 382 RAGARADFLTLDGDHPYLAGALGDSLLDRWLFAGGGAAVRDVWVGGRWVVRDGRHA--LREEIGRAFARV 449 (455)
T ss_pred CCCCCcCEEEEeCCCcccCCCCchhHHHHHhhcCCCCCccEEEECCEEEEECCccc--cHHHHHHHHHHH
Confidence 999999999999885554453 567888888888899999999999999999996 666677776654
No 20
>PRK08418 chlorohydrolase; Provisional
Probab=100.00 E-value=3.7e-47 Score=365.47 Aligned_cols=392 Identities=21% Similarity=0.245 Sum_probs=299.3
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|+.|++.++...++.+++|+|+ |+|++|++..+....+ ++.++||++|++|+|||||+|+|+.++..++...+
T Consensus 2 ~~i~~~~v~t~~~~~~~~~~~~v~v~-~~I~~ig~~~~~~~~~--~~~~vid~~g~~v~PG~Vn~H~H~~~~~~rg~~~~ 78 (408)
T PRK08418 2 KIIGASYIFTCDENFEILEDGAVVFD-DKILEIGDYENLKKKY--PNAKIQFFKNSVLLPAFINPHTHLEFSANKTTLDY 78 (408)
T ss_pred EEEEccEEEecCCCCceeeccEEEEC-CEEEEecCHHHHHhhC--CCCcEEecCCcEEccCccccccchhhhhhccccCC
Confidence 57999999987754567789999999 9999999854432211 23468999999999999999999999988887777
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCCCCCCcc
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (466)
.++.+|+....+..+ .+.++..+........+++++||||+.++.... ...++..+.|+|..+....... +..
T Consensus 79 ~~~~~wl~~~~~~~~-~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~~~~--~~~~a~~~~GiR~~~~~~~~~~----~~~ 151 (408)
T PRK08418 79 GDFIPWLGSVINHRE-DLLEKCKGALIQQAINEMLKSGVGTIGAISSFG--IDLEICAKSPLRVVFFNEILGS----NAS 151 (408)
T ss_pred CchHHHHHHHhhhhh-hcCHHHHHHHHHHHHHHHHhcCceEEEEeecch--hhHHHHHhcCCeEEEEeeeeCC----Ccc
Confidence 788999988776664 355666666677788999999999999875432 3367888999999775433321 111
Q ss_pred cccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCC-
Q 012333 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV- 259 (466)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~- 259 (466)
+. ........+.++.......+.++..++++.++.++++.++++.++|+++++++++|+.++..+..+.....+.
T Consensus 152 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~aph~~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~E~~~~~~~~G~~ 227 (408)
T PRK08418 152 AV----DELYQDFLARFEESKKFKSKKFIPAIAIHSPYSVHPILAKKALQLAKKENLLVSTHFLESKAEREWLEESKGWF 227 (408)
T ss_pred ch----hhhHHHHHHHHHhhhcccCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCHHHHHHHHhccCch
Confidence 11 1111112222222222234578888999999999999999999999999999999999998887776665441
Q ss_pred -------------CCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCc
Q 012333 260 -------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADIC 325 (466)
Q Consensus 260 -------------~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~ 325 (466)
...+.+.++.++ ..+.++.||.++++++++++++.|+.+++||.+++++ .+.+|++++++.|++
T Consensus 228 ~~~~~~~~~~~~~~~~pv~~l~~~g--~~~~~~~H~~~~~~~di~~la~~g~~v~~cP~sn~~lg~g~~p~~~~~~~Gi~ 305 (408)
T PRK08418 228 KKFFEKFLKEPKPLYTPKEFLELFK--GLRTLFTHCVYASEEELEKIKSKNASITHCPFSNRLLSNKALDLEKAKKAGIN 305 (408)
T ss_pred hhhhhhhcccccccCCHHHHHHHhC--CCCeEEEecccCCHHHHHHHHHcCCcEEECHhHHHHhcCCCccHHHHHhCCCe
Confidence 224667777665 4678999999999999999999999999999999887 678999999999999
Q ss_pred EEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEE
Q 012333 326 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVV 405 (466)
Q Consensus 326 ~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~ 405 (466)
+++|||+..+++.++++.+|+.+....+.. ....+++++++++|.++|+++|++ .|+|++||.||||++
T Consensus 306 v~lGtD~~~~~~~~~~~~em~~~~~~~~~~---------~~~~~~~~~l~~aT~~gA~alg~~--~G~l~~G~~ADlv~~ 374 (408)
T PRK08418 306 YSIATDGLSSNISLSLLDELRAALLTHANM---------PLLELAKILLLSATRYGAKALGLN--NGEIKEGKDADLSVF 374 (408)
T ss_pred EEEeCCCCCCCCCcCHHHHHHHHHHHhccC---------CccccHHHHHHHHHHHHHHHhCCC--CccccCCCccCEEEE
Confidence 999999877767889999999887655421 111357899999999999999994 699999999999999
Q ss_pred cCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEE
Q 012333 406 DPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 442 (466)
Q Consensus 406 d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 442 (466)
|.+.....+..+|...+ + ....|..|||+|++|.
T Consensus 375 d~~~~~~~~~~~~~~~~-~--~~~~v~~v~v~G~~v~ 408 (408)
T PRK08418 375 ELPEECTKKEQLPLQFI-L--HAKEVKKLFIGGKEVK 408 (408)
T ss_pred eCCCCCCChhHhHHHHH-h--ccCccceEEECCEEcC
Confidence 98732111222333322 1 3468999999999873
No 21
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=6.9e-47 Score=365.96 Aligned_cols=384 Identities=21% Similarity=0.283 Sum_probs=299.4
Q ss_pred ceeeceEE-EEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccC-----CCCchHhhhh
Q 012333 36 RVFRNGGV-FVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-----DVDLMTWLHD 109 (466)
Q Consensus 36 ~~~~~~~v-~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~-----~~~~~~~~~~ 109 (466)
++.++++| +|+||+|++||+.. ..++||++|++|+|||||+|+|+.++.+++... ..++.+|+.
T Consensus 6 ~~~~~~~i~~v~~g~I~~Vg~~~---------~~~~iD~~g~lv~PGfVn~H~Hl~~~~~rg~~~~~~~~~~~l~~w~~- 75 (418)
T cd01313 6 GWERNVRIEVDADGRIAAVNPDT---------ATEAVALLGGALLPGMPNLHSHAFQRAMAGLTEYRGSAADSFWTWRE- 75 (418)
T ss_pred ceecCeEEEEeCCCeEEEecCCC---------CCcccccCCCeeccCccccCccHHHHHhcccccccCCCCCChhhHHH-
Confidence 46678899 99999999999743 124699999999999999999999999998754 356778984
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc--------------CHHHHHHHHHHhCCeEEeecccccCCC
Q 012333 110 RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVELLGLRACLVQSTMDCGE 175 (466)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~--------------~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (466)
..|+....+++++.+......+.+++++||||++++... ......++..+.|+|..+....++...
T Consensus 76 ~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~~~~~~ 155 (418)
T cd01313 76 LMYRFAARLTPEQIEAIARQLYIEMLLAGITAVGEFHYVHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYARAG 155 (418)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEEeeeeccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeEEeccC
Confidence 456777788999999999999999999999999986311 124567888899999987655543221
Q ss_pred CC-Cccc-----ccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcch
Q 012333 176 GL-PASW-----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (466)
Q Consensus 176 ~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (466)
.. .+.. ......+.++...+.++.+.. .+.+...+.++....++++.+++++++|++ |+++++|+.+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~~a~~-g~~i~~H~~e~~~e 232 (418)
T cd01313 156 FGGPAPNPGQRRFINGYEDFLGLLEKALRAVKE--HAAARIGVAPHSLRAVPAEQLAALAALASE-KAPVHIHLAEQPKE 232 (418)
T ss_pred CCCCCCchhhhhhcccHHHHHHHHHHHhhhhcc--CCceEEEEccCCCCCCCHHHHHHHHHHHhc-CCceEEEeCCCHHH
Confidence 00 1100 001112222222232233332 356777788888889999999999999999 99999999887665
Q ss_pred hHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEE
Q 012333 250 NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSL 328 (466)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~ 328 (466)
........+ ..+.+.+...+.++.+.++.||.++++++++++++.|+.+++||.+++++ .+.+|++++++.|+++++
T Consensus 233 ~~~~~~~~g--~~~i~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g~~p~~~l~~~Gv~v~l 310 (418)
T cd01313 233 VDDCLAAHG--RRPVELLLDHGHLDARWCLVHATHLTDNETLLLGRSGAVVGLCPTTEANLGDGIFPAAALLAAGGRIGI 310 (418)
T ss_pred HHHHHHHcC--CCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECCCchhhccCCCCCHHHHHHCCCcEEE
Confidence 555444433 45788999999999999999999999999999999999999999999877 678999999999999999
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC
Q 012333 329 GTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (466)
Q Consensus 329 gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~ 408 (466)
|||+... .+++..++.+...++........+...+.++++++|+++|.++|+++|++ +|+|++||.|||||+|.+
T Consensus 311 GtD~~~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~--~Gsle~Gk~ADlvvld~~ 385 (418)
T cd01313 311 GSDSNAR---IDLLEELRQLEYSQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLA--TGALEAGARADLLSLDLD 385 (418)
T ss_pred ecCCCCC---cCHHHHHHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCC--CCeECCCCccCEEEEcCC
Confidence 9997543 58999998876655432111111112346999999999999999999995 899999999999999999
Q ss_pred CCCCCCc--CCcccceecccCCCCeeEEEEccE
Q 012333 409 SWPMVPV--HDRITSLVYCMRTENVVSVMCNGQ 439 (466)
Q Consensus 409 ~~~~~~~--~~~~~~~~~~~~~~~v~~v~v~G~ 439 (466)
.....|. .+|+..+++......|..|||+|+
T Consensus 386 ~~~~~p~~~~~~~~~lv~~~~~~~V~~v~V~G~ 418 (418)
T cd01313 386 HPSLAGALPDTLLDAWVFAAGDREVRDVVVGGR 418 (418)
T ss_pred CccccCCCchhHHHHHeecCCCCceeEEEeCCC
Confidence 7666665 478999999999999999999996
No 22
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.9e-46 Score=363.62 Aligned_cols=408 Identities=33% Similarity=0.548 Sum_probs=339.2
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
..++|+|..++..|+... ++.+++.|++|+|+.|++..+.+ ++.++||++|++|+|||||+|+|+.++..++..
T Consensus 2 ~~~~i~~~~~~~~d~~~~-~~~~~~~i~~g~I~~ig~~~~~~-----~~~~~iD~~~~lv~Pgfvn~H~H~~~t~~~g~~ 75 (421)
T COG0402 2 TMLLIRGDLLLTNDPEGR-IEDGDLVIEDGKIVAIGANAEGP-----PDEEVIDAKGKLVLPGFVNAHTHLDQTLLRGLA 75 (421)
T ss_pred cceeeeCcEEeecCcccc-eeeeeEEEcCCEEEEeCCcCCCC-----CCceeecCCCCEeccCccccccchHHHHHhhhh
Confidence 357889999998655433 56789999999999999975431 367899999999999999999999999999998
Q ss_pred CCCCchHhhhhccccccCC-CChhHHHHHHHHHHHHHHhcCceeeeecCccC---HHHHHHHHHHhCCeEEeecccccCC
Q 012333 99 DDVDLMTWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCG 174 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (466)
...++.+|+....|+.+.. .++++.+......+.+++++|+|++....... .....++..+.|++...+..+++.+
T Consensus 76 ~~~~l~~wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~ 155 (421)
T COG0402 76 DDLPLLEWLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHVDVVAESADAAFEAALEVGLRAVLGPVLQDVA 155 (421)
T ss_pred cccchHHHHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCccccccccchhhhhHHHHHHHHHHhCCeeEeeeccccCC
Confidence 8888999999988988877 56668888888999999999999976654332 3346778999999999988887754
Q ss_pred CCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHH
Q 012333 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (466)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (466)
++....... +. ++...+.++++...+ .+.+.+.++.++.++++.++.+.++++++|+++++|+.|+..+.....
T Consensus 156 --~p~~~~~~~-~~-~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~ 229 (421)
T COG0402 156 --FPDPGAETD-EE-LEETEELLREAHGLG--RDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIHLAETLDEVERVL 229 (421)
T ss_pred --CCcccccch-HH-HHHHHHHHHHHhcCC--CeeEEEecCCCCCCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHH
Confidence 222222111 11 556778888887765 677778999999999999999999999999999999999999888887
Q ss_pred hhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCC
Q 012333 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGA 333 (466)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~ 333 (466)
... +....+.++..+++..+.++.|++++++++++.+++.|+.+++||.+|+++ .+..|+.++++.|+++++|||..
T Consensus 230 ~~~--g~~~~~~~~~~g~l~~~~~~~H~~~~~~~e~~~l~~~g~~v~~cP~sN~~L~sG~~p~~~~~~~gv~v~~gTD~~ 307 (421)
T COG0402 230 EPY--GARPVERLDLLGLLGSHTLLAHCVHLSEEELELLAESGASVVHCPRSNLKLGSGIAPVRRLLERGVNVALGTDGA 307 (421)
T ss_pred hhc--CCCHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHhhCCCeEEECcchhccccCCCCCHHHHHHcCCCEEEecCCc
Confidence 733 445888899999999999999999999999999999999999999999998 66899999999999999999998
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCC
Q 012333 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 413 (466)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~ 413 (466)
.+++.+++|.++..+..+++....... ..... ++++++|.++|++||+ ++.|+|++|++|||||+|.+.....
T Consensus 308 ~~~~~~d~l~~~~~a~~l~~~~~~~~~-----~~~~~-~~l~~aT~~gA~alg~-~~~G~le~G~~ADlvvld~~~~~~~ 380 (421)
T COG0402 308 ASNNVLDMLREMRTADLLQKLAGGLLA-----AQLPG-EALDMATLGGAKALGL-DDIGSLEVGKKADLVVLDASAPHLA 380 (421)
T ss_pred cccChHHHHHHHHHHHHHHHhhcCCCc-----ccchH-HHHHHHHhhHHHHcCC-cccCCcccccccCEEEEcCCCCccc
Confidence 887778999999999888775432111 11222 4999999999999998 6799999999999999999965444
Q ss_pred CcCCcccceecccCCCCeeEEEEccEEEEECCeee
Q 012333 414 PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 448 (466)
Q Consensus 414 ~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 448 (466)
+.. +.+.+++......|..|+++|+.++++++..
T Consensus 381 ~~~-~~~~~v~~~~~~~v~~v~~~g~~v~~~~~~~ 414 (421)
T COG0402 381 PLR-PVSRLVFAAGGKDVDRVLVDGRLVMEDGRLL 414 (421)
T ss_pred ccc-HHHHHHHhcCCCceeEEEECCEEEEEcceeh
Confidence 444 6667888887889999999999999999876
No 23
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.4e-47 Score=340.54 Aligned_cols=413 Identities=26% Similarity=0.346 Sum_probs=336.0
Q ss_pred EEEccEEEee-cCCcceeeceEEEEEC-CEEEEEcCCchhhhhhcc-----CCCeEEeCCCcEEeecccccccC-Ccccc
Q 012333 22 ILHNAVIVTM-DKESRVFRNGGVFVVQ-DRIKAIGQSADILQQFSQ-----MADQIIDLQSQILLPGFVNTHVH-TSQQL 93 (466)
Q Consensus 22 lI~n~~i~~~-d~~~~~~~~~~v~I~~-G~I~~Ig~~~~~~~~~~~-----~~~~~iD~~G~~v~PG~ID~H~H-~~~~~ 93 (466)
+..|..+.+. .++..+.++..+.|.| |||+.|++......++.. +..++++..|.++||||||+|+| ..+..
T Consensus 8 v~~gtf~~~~~~~~l~i~e~~sl~Vd~~GKi~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~mPGfVdtH~H~a~q~~ 87 (439)
T KOG3968|consen 8 VFVGTFVHTDALGELEILEGSSLGVDDTGKIVFIGKAYFDENKLKGEGVEKENTKIKLSSGHFLMPGFVDTHIHPAHQFA 87 (439)
T ss_pred EecccEEeeccccceEEecCcceeecCCccEEEeeccccchhhhcccccccccceeeecCCcEEecceeecccchHhhhh
Confidence 3444444432 2345677788889987 999999986544322211 24478999999999999999999 44555
Q ss_pred cccccCCCCchHhhhhccccccCCCCh-hHHHHHHHHHHHHHHhcCceeeeecCccC---HHHHHHHHHHhCCeEEeecc
Q 012333 94 AKGIADDVDLMTWLHDRIWPYESNMTE-EDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQS 169 (466)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~GvTtv~~~~~~~---~~~~~~~~~~~g~~~~~~~~ 169 (466)
..+...+.++.+|+.++.|+.+...+. ++.+.......++++++|+||+..+.+.+ ..-++++....|+|..++..
T Consensus 88 ~s~~g~d~pll~wl~~~~f~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~~~~~~s~~ll~~~~~~~G~R~~igkv 167 (439)
T KOG3968|consen 88 MSGAGTDMPLLQWLGKYTFPLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFSTLHLDSELLLARAAIRAGQRALIGKV 167 (439)
T ss_pred hhccccCcHHHHHhhcceeecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhhccCchhHHHHHHHHHHhCCceeeeee
Confidence 556667899999999999999999888 55555555678999999999998876544 34567888899999999999
Q ss_pred cccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcch
Q 012333 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (466)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (466)
.++++. +.+.+.....+..+....+++....+.....+.....++....++...+++...+++...+++++|..++..+
T Consensus 168 ~m~~~~-~~~p~~~~~~E~si~~t~~~i~~~~~~~~~~~~~~vt~~fa~~c~k~v~~~l~~lak~~~l~~q~hIsen~~E 246 (439)
T KOG3968|consen 168 CMDCNA-HAVPKGVETTEESIESTEDLIPKLEKLKREKVNPIVTPRFAASCSKGVFEELSKLAKYHNLHIQIHISENGKE 246 (439)
T ss_pred hhccCC-CCCCccchhHHHHHHHHHHHHHHHHhhccCCCCCcccccccCCCcchhHHHHHHHHHhhhhhhhhhhhhcHHH
Confidence 998774 3444455566777777777777777666666666566777778888899999999999999999999999999
Q ss_pred hHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEE
Q 012333 250 NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSL 328 (466)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~ 328 (466)
..+....++--......++..++++++.+++|+.++++++++.++++|..+.+||.++..+ .+.++++++++.|+.+.+
T Consensus 247 I~~~~~ff~~~~~y~~~yd~~~lL~~ktvlaH~~hl~d~ei~~l~k~g~svshCP~Sn~~L~sG~~~vr~lL~~~v~VgL 326 (439)
T KOG3968|consen 247 IEAVKNFFPEKLSYTDVYDKGGLLTEKTVLAHLEHLSDEEIELLAKRGCSVSHCPTSNSILGSGIPRVRELLDIGVIVGL 326 (439)
T ss_pred HHHHHHhhhhcccchHHHHHhcccchHhHhhhheecCchhHHHHHhcCCceEECCcchhhhccCCccHHHHHhcCceEee
Confidence 9999888887777888899999999999999999999999999999999999999999888 789999999999999999
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC
Q 012333 329 GTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (466)
Q Consensus 329 gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~ 408 (466)
|||..+ +++...++.+..+++...... +...||++|+|.+||.++|++||+++..|++++||.+|++++|.+
T Consensus 327 GtDv~~----~s~l~a~r~A~~~s~hL~~~~----~~~~Ls~~e~L~lATi~GA~aLg~d~~~Gs~eVGK~fDai~id~s 398 (439)
T KOG3968|consen 327 GTDVSG----CSILNALRQAMPMSMHLACVL----DVMKLSMEEALYLATIGGAKALGRDDTHGSLEVGKYFDAIIIDLS 398 (439)
T ss_pred cCCccc----cccHHHHHHHHHHHHHHHhcc----CcccCCHHHHHHHHhccchhhccCCCcccceecccccceEEEeCC
Confidence 999876 367778777777665432222 345799999999999999999999999999999999999999999
Q ss_pred CCC----CCC-cCCcccceecccCCCCeeEEEEccEEEEE
Q 012333 409 SWP----MVP-VHDRITSLVYCMRTENVVSVMCNGQWVMK 443 (466)
Q Consensus 409 ~~~----~~~-~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 443 (466)
.|. ..+ .++.++.++|..+++++..|||+|+.|++
T Consensus 399 ~~~~~l~~~~~~~~lI~~~v~~g~drni~~V~V~Gk~v~~ 438 (439)
T KOG3968|consen 399 APESPLYRFSGHHDLISKVVYNGDDRNIAEVFVAGKLVKQ 438 (439)
T ss_pred CCcchhhhccchHHHHHHHHhcCCCCceEEEEEccEEecc
Confidence 552 223 45678889999999999999999999875
No 24
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=3.1e-45 Score=348.55 Aligned_cols=364 Identities=20% Similarity=0.278 Sum_probs=289.6
Q ss_pred CEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCCCCchHhhhhccccccCCCChhHHHHHH
Q 012333 48 DRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYIST 127 (466)
Q Consensus 48 G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (466)
|+|++||+..+....+ ++.+++|++|++|+|||||+|+|+.++.+++...+.++.+|+.... +....+++++.+...
T Consensus 1 ~~I~aVG~~~~~~~~~--~~~~v~d~~g~~v~PGlVnaH~H~~~~~~rg~~~~~~~~~wl~~~~-~~~~~~~~e~~~~~a 77 (381)
T cd01312 1 DKILEVGDYEKLEKRY--PGAKHEFFPNGVLLPGLINAHTHLEFSANVAQFTYGRFRAWLLSVI-NSRDELLKQPWEEAI 77 (381)
T ss_pred CeEEEECChHHHHhhc--CCCeEEecCCcEEecCccccccccchhccccccCCCchHHHHHHHH-HHHHhcChHHHHHHH
Confidence 7999999865543333 2568999999999999999999999999998777788999997654 455667788888888
Q ss_pred HHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCC
Q 012333 128 LLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGR 207 (466)
Q Consensus 128 ~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (466)
...+.+++++||||+.|+... ....++..+.|+|..++...++... .. .........+.+.++....++.
T Consensus 78 ~~~~~E~l~~G~Tt~~d~~~~--~~~~~a~~~~GiR~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~ 147 (381)
T cd01312 78 RQGIRQMLESGTTSIGAISSD--GSLLPALASSGLRGVFFNEVIGSNP---SA-----IDFKGETFLERFKRSKSFESQL 147 (381)
T ss_pred HHHHHHHHHhCCeEEEEecCC--HHHHHHHHHcCCcEEEEEeeECCCC---ch-----hhhhHHHHHHHHHHhhccCccc
Confidence 889999999999999998643 2377888899999988776654221 11 1111122222333332223467
Q ss_pred eEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcC----------------CCCchHHHHhhhc
Q 012333 208 IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK----------------VDHGTVTFLDKIE 271 (466)
Q Consensus 208 i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~ 271 (466)
++..++++.++.++++.++++.++|+++++++++|+.++..+..+.....+ .+..+++.++.++
T Consensus 148 v~~~~~p~a~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~g~~pv~~l~~~g 227 (381)
T cd01312 148 FIPAISPHAPYSVHPELAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFWESFLKLPKPKKLATAIDFLDMLG 227 (381)
T ss_pred eEEEECCCCCcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHHHHHHHhccchhhHhhhhcccccccCCCCHHHHHHHcC
Confidence 888899999999999999999999999999999999999888766554321 1556889999999
Q ss_pred cCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHH
Q 012333 272 FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASL 350 (466)
Q Consensus 272 ~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~ 350 (466)
+++.+.++.||.++++++++++++.|+.+++||.+++++ .+..|++++++.|+++++|||+...++..+++.+|+.+..
T Consensus 228 ~L~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~lg~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~~~~ 307 (381)
T cd01312 228 GLGTRVSFVHCVYANLEEAEILASRGASIALCPRSNRLLNGGKLDVSELKKAGIPVSLGTDGLSSNISLSLLDELRALLD 307 (381)
T ss_pred CCCCCcEEEECCcCCHHHHHHHHHcCCeEEECcchhhhhcCCCcCHHHHHHCCCcEEEeCCCCccCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999876 5788999999999999999998776667899999998876
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCC
Q 012333 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTEN 430 (466)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~ 430 (466)
..+... ..+++.++|+++|.++|+++|++ .|+|++||+||||++|.+.. ..|..++. .++ .....
T Consensus 308 ~~~~~~---------~~~~~~~~l~~aT~~gA~alg~~--~Gsle~Gk~ADlvv~d~~~~-~~~~~~~~-~~~--~~~~~ 372 (381)
T cd01312 308 LHPEED---------LLELASELLLMATLGGARALGLN--NGEIEAGKRADFAVFELPGP-GIKEQAPL-QFI--LHAKE 372 (381)
T ss_pred hccccc---------ccCCHHHHHHHHHHHHHHHhCCC--CCccCCCCcccEEEEeCCCc-CCCCccHH-HHH--HccCC
Confidence 543220 12678999999999999999994 89999999999999998854 23554543 222 24579
Q ss_pred eeEEEEccE
Q 012333 431 VVSVMCNGQ 439 (466)
Q Consensus 431 v~~v~v~G~ 439 (466)
|..|||+|+
T Consensus 373 v~~v~v~G~ 381 (381)
T cd01312 373 VRHLFISGK 381 (381)
T ss_pred CCEEEecCC
Confidence 999999996
No 25
>PRK07213 chlorohydrolase; Provisional
Probab=100.00 E-value=7.4e-44 Score=340.20 Aligned_cols=367 Identities=19% Similarity=0.287 Sum_probs=281.8
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|++++ .....+++|+|++|+|++|++.. ++.++||++|++| |||||+|+|+..+..++...+
T Consensus 2 ~li~~~~v~~~~--~~~~~~~~v~i~~g~I~~i~~~~--------~~~~~id~~g~~v-PGlvd~H~H~~~~~~rg~~~~ 70 (375)
T PRK07213 2 LVYLNGNFLYGE--DFEPKKGNLVIEDGIIKGFTNEV--------HEGNVIDAKGLVI-PPLINAHTHIGDSSIKDIGIG 70 (375)
T ss_pred EEEEeeEEEeCC--CCceeeeEEEEECCEEEEeccCC--------CCCeEEeCCCCEe-cceeeeccccCchhhhcCCCC
Confidence 689999999743 23456779999999999998641 2457999999999 999999999999888888777
Q ss_pred CCchHhhhh---ccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC---HHHHHHHHHHhCCeEEeecccccCC
Q 012333 101 VDLMTWLHD---RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCG 174 (466)
Q Consensus 101 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (466)
.++.+|+.. ..+.....+++++.+......+.+++++||||+.|+.... ...+.++....+++.....
T Consensus 71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~~~~~~~~~~~a~~~~~~r~~~~~------ 144 (375)
T PRK07213 71 KSLDELVKPPNGLKHKFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFREGGIKGINLLKKASSDLPIKPIILG------ 144 (375)
T ss_pred CCHHHHccCCCcchHHHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhhcChhHHHHHHHHHHcCCCceEEec------
Confidence 788888642 1222335677888888888899999999999999964222 3334555566666653210
Q ss_pred CCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHH
Q 012333 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (466)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (466)
.+... ..+.. .+.++++.+... .++++.....+++.++++++.|+++++++++|+.+...+.....
T Consensus 145 --~~~~~---~~~~~----~~~~~~~~~~~~-----g~~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~ 210 (375)
T PRK07213 145 --RPTEA---DENEL----KKEIREILKNSD-----GIGLSGANEYSDEELKFICKECKREKKIFSIHAAEHKGSVEYSL 210 (375)
T ss_pred --CCCcc---cchhh----HHHHHHHHHhcc-----cccccccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhHHHHHH
Confidence 00000 01111 122222211111 14555666788999999999999999999999999887766665
Q ss_pred hhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCC
Q 012333 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGA 333 (466)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~ 333 (466)
...+. .+.+.+...+.. .+ .+.|+.++++++++++++.|+.+++||.+++.. .+.+|++++++.|+++++|||..
T Consensus 211 ~~~G~--~~v~~~~~~G~~-~~-~i~H~~~~~~~~i~~la~~g~~v~~~P~sn~~l~~g~~~v~~l~~~Gv~v~lGTD~~ 286 (375)
T PRK07213 211 EKYGM--TEIERLINLGFK-PD-FIVHATHPSNDDLELLKENNIPVVVCPRANASFNVGLPPLNEMLEKGILLGIGTDNF 286 (375)
T ss_pred HHcCC--ChHHHHHhcCCC-CC-EEEECCCCCHHHHHHHHHcCCcEEECCcchhhhccCCccHHHHHHCCCEEEEeeCCC
Confidence 54443 466767777765 44 589999999999999999999999999999877 67899999999999999999986
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCC
Q 012333 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 413 (466)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~ 413 (466)
+. +..+++.+++.+.... ++++.++++++|.++|++||+++ .|+|++|+.||||++|.+. ..
T Consensus 287 ~~-~~~~~~~e~~~~~~~~--------------~~~~~~~l~~aT~~gA~~lg~~~-~G~l~~G~~ADlvv~d~~~--~~ 348 (375)
T PRK07213 287 MA-NSPSIFREMEFIYKLY--------------HIEPKEILKMATINGAKILGLIN-VGLIEEGFKADFTFIKPTN--IK 348 (375)
T ss_pred CC-chHhHHHHHHHHHHHh--------------CcCHHHHHHHHHHHHHHHhCCCC-cCCcCCCCcccEEEEcCcc--cc
Confidence 54 3457888888764321 38999999999999999999964 8999999999999999864 34
Q ss_pred CcCCcccceecccCCCCeeEEEEccEE
Q 012333 414 PVHDRITSLVYCMRTENVVSVMCNGQW 440 (466)
Q Consensus 414 ~~~~~~~~~~~~~~~~~v~~v~v~G~~ 440 (466)
|..||+..+++......|..|||+||+
T Consensus 349 p~~dp~~~lV~~~~~~~v~~v~v~G~~ 375 (375)
T PRK07213 349 FSKNPYASIITRCESGDIVNKILKGKL 375 (375)
T ss_pred ccCCchHHHhhhccCCCceEEEECCcC
Confidence 788999999999989999999999984
No 26
>PRK09356 imidazolonepropionase; Validated
Probab=100.00 E-value=5.4e-41 Score=326.10 Aligned_cols=380 Identities=20% Similarity=0.263 Sum_probs=251.6
Q ss_pred ccceEEEEccEEEeecCCc----ceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccc
Q 012333 17 SSSTMILHNAVIVTMDKES----RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~----~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~ 92 (466)
+|++++|+|+.|+++++.. +.+++++|+|+||+|++|++..+.+. ....++||++|++|+|||||+|+|+++.
T Consensus 1 ~~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~---~~~~~~iD~~g~~v~PG~id~H~Hl~~~ 77 (406)
T PRK09356 1 MMADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPA---AYAAEVIDAGGKLVTPGLIDCHTHLVFG 77 (406)
T ss_pred CCceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCcccccc---ccCceEEECCCCEEeeceEecCCCcccC
Confidence 4688999999999876532 67789999999999999998643321 1235899999999999999999999865
Q ss_pred ccccc-----cCCCCchHhhhhc-----cccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC--H---HHHHHHH
Q 012333 93 LAKGI-----ADDVDLMTWLHDR-----IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--V---SEMAKAV 157 (466)
Q Consensus 93 ~~~~~-----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~--~---~~~~~~~ 157 (466)
..++. ....++.+|+... .+......+.++.+......+.+++++|||++.+.+... . ....++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~ 157 (406)
T PRK09356 78 GNRANEFELRLQGVSYEEIAAQGGGILSTVRATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYGLDLETELKMLRVA 157 (406)
T ss_pred CCcHHHHHHHHCCCcHHHHHHhcCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCHHHHHHHHHHH
Confidence 44432 2233445554321 112234466677777778888999999999998754221 1 1122333
Q ss_pred HHh----CCeEEeecccccCCCCCCcccccCChHHHHHHH-HHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHH
Q 012333 158 ELL----GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (466)
Q Consensus 158 ~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a 232 (466)
... +++... ... .+.+++.... ......+... .+.++..... ..+............+++.+.+++++|
T Consensus 158 ~~~~~~~~i~~~~--~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~l~~~~~~A 231 (406)
T PRK09356 158 RRLGEEHPVDVVT--TFL-GAHAVPPEYK-GRPDAYIDLVCEEMLPAVAEE--GLADAVDVFCETGAFSVEQSERVLEAA 231 (406)
T ss_pred HHHhhhCCCceEe--eee-ecccCCcccc-CCHHHHHHHHHHHHhHHHHhc--CCcceEEEEecCCCCCHHHHHHHHHHH
Confidence 333 333211 111 1112232221 1112222221 1233332221 223332223334456789999999999
Q ss_pred HHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc--
Q 012333 233 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-- 310 (466)
Q Consensus 233 ~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-- 310 (466)
+++|+++++|+.+..... ..+.....+ ...+.|+.++++++++++++.|+.+++||.+++..
T Consensus 232 ~~~g~~v~~H~~~~~~~~------------~~~~~~~~~----~~~~~H~~~~~~~~~~~la~~g~~~~~~P~~~~~l~~ 295 (406)
T PRK09356 232 KALGLPVKIHAEQLSNLG------------GAELAAEYG----ALSADHLEYLDEAGIAAMAEAGTVAVLLPGAFYFLRE 295 (406)
T ss_pred HHCCCCEEEEEecccCCC------------HHHHHHHcC----CcEehHhhcCCHHHHHHHHHhCCEEEECccchhhcCc
Confidence 999999999997532211 111111111 23578999999999999999999999999988765
Q ss_pred cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCc
Q 012333 311 LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDND 390 (466)
Q Consensus 311 ~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~ 390 (466)
.+..+++++++.|+++++|||+.+. .+++..+........ ...+++++++++++|.+||+++|++++
T Consensus 296 ~~~~~~~~l~~~Gi~v~lgtD~~~~---~~~~~~~~~~~~~~~----------~~~~l~~~~~l~~~T~~~A~~~g~~~~ 362 (406)
T PRK09356 296 TQYPPARLLRDAGVPVALATDFNPG---SSPTESLLLAMNMAC----------TLFRLTPEEALAAVTINAARALGRQDT 362 (406)
T ss_pred ccCchHHHHHHCCCeEEEeCCCCCC---CChhHHHHHHHHHHh----------hhcCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 4578999999999999999998542 134444443322110 112599999999999999999999888
Q ss_pred ccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEE
Q 012333 391 IGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 443 (466)
Q Consensus 391 ~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 443 (466)
+|+|++||.|||||+|.+++. . +++.....+|..||++|++||+
T Consensus 363 ~G~i~~G~~AD~vvld~~~~~-----~----~~~~~~~~~v~~v~v~G~~vy~ 406 (406)
T PRK09356 363 HGSLEVGKKADLVIWDAPSPA-----E----LPYHFGVNPVETVVKNGEVVVD 406 (406)
T ss_pred ceeeCCCCcCCEEEECCCchh-----h----hhhhhCCCCccEEEECCEEeeC
Confidence 999999999999999998432 1 2222345799999999999985
No 27
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=100.00 E-value=4.1e-39 Score=313.49 Aligned_cols=368 Identities=18% Similarity=0.187 Sum_probs=249.8
Q ss_pred EEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCCC
Q 012333 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDV 101 (466)
Q Consensus 22 lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~ 101 (466)
.|+|++|+++ . ..+++|+|+||+|++|++..+. + ++.++||++|++|+|||||+|+|++++.+++...+.
T Consensus 1 ~~~~~~~~~~--~---~~~~~v~I~~g~I~~Vg~~~~~----~-~~~~vID~~g~~v~PGlId~H~H~~~~~~~~~~~~~ 70 (398)
T cd01293 1 LLRNARLADG--G---TALVDIAIEDGRIAAIGPALAV----P-PDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNN 70 (398)
T ss_pred CeeeeEEeCC--C---ceEEEEEEECCEEEEEecCCCC----C-CCCceEeCCCCEEccCEeeeeeccCcccccCCCCCC
Confidence 3789999953 1 3667999999999999986432 1 367899999999999999999999887777755544
Q ss_pred CchHhhhhc--cccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-------HHHHHHHHHHhCCeEEeeccccc
Q 012333 102 DLMTWLHDR--IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-------VSEMAKAVELLGLRACLVQSTMD 172 (466)
Q Consensus 102 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~ 172 (466)
+...|+... +++....+++++.+......+.+++++||||++++.... .....++....+.+.........
T Consensus 71 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (398)
T cd01293 71 SGGTLLEAIIAWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQIVAFP 150 (398)
T ss_pred CccccHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhccceEEEEecc
Confidence 444443221 112234577788888888889999999999998754311 22333443444433322111111
Q ss_pred CCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHH
Q 012333 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 252 (466)
+..... . ++..+.++++.+.+...+. .........++++.++++++.|+++|+++++|+.+.......
T Consensus 151 -----~~~~~~--~----~~~~~~v~~~~~~g~~~~~-~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~ 218 (398)
T cd01293 151 -----QHGLLS--T----PGGEELMREALKMGADVVG-GIPPAEIDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGSR 218 (398)
T ss_pred -----CccccC--C----CCHHHHHHHHHHhCCCEEe-CCCCCcCCccHHHHHHHHHHHHHHhCCCCEEEeCCCCCcchh
Confidence 000100 0 1223344444433322221 122222345678999999999999999999999876544222
Q ss_pred HHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh-------hhHHHHHhcCCeEEECccchhhc----------cCCcc
Q 012333 253 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRM----------LGFAP 315 (466)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-------~~~~~~~~~g~~~~~~p~~~~~~----------~~~~~ 315 (466)
... .....+...+.. .+..+.|+.+++. +.++++++.|+.+++||.+++.. .+..+
T Consensus 219 ~~~------~~~~~~~~~g~~-~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~s~~~l~~~~~~~~~~~~~~~ 291 (398)
T cd01293 219 TLE------ELAEEAERRGMQ-GRVTCSHATALGSLPEAEVSRLADLLAEAGISVVSLPPINLYLQGREDTTPKRRGVTP 291 (398)
T ss_pred HHH------HHHHHHHHhCCC-CCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEEeCCCcchhhcccccCCCCCCCCCc
Confidence 111 123344455554 6678999998863 45999999999999999988654 46789
Q ss_pred HHHHHHcCCcEEEccCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcc
Q 012333 316 IKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (466)
Q Consensus 316 ~~~~~~~gi~~~~gsD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~ 391 (466)
++++++.|+++++|||+.. .....+++..++.+....+.. ...+.+++|+++|.++|+++|+ +.
T Consensus 292 ~~~~~~~Gv~v~lGTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~al~~aT~~~A~~lg~--~~ 359 (398)
T cd01293 292 VKELRAAGVNVALGSDNVRDPWYPFGSGDMLEVANLAAHIAQLG----------TPEDLALALDLITGNAARALGL--ED 359 (398)
T ss_pred HHHHHHCCCeEEECCCCCCCCCcCCCCCCHHHHHHHHHHHHcCC----------ChhhHHHHHHhcChhhhhhcCC--cC
Confidence 9999999999999999842 223457888888765433210 1145689999999999999999 47
Q ss_pred cccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEE
Q 012333 392 GSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWV 441 (466)
Q Consensus 392 G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v 441 (466)
|+|++||.||||++|.+ |+++.... ..++..||++|+++
T Consensus 360 G~l~~Gk~ADlv~~d~~-----~~~~~~~~------~~~~~~v~~~G~~~ 398 (398)
T cd01293 360 YGIKVGCPADLVLLDAE-----DVAEAVAR------QPPRRVVIRKGRVV 398 (398)
T ss_pred cccccCCcceEEEECCC-----CHHHHHhc------CCCccEEEECCEEC
Confidence 99999999999999998 44332211 25899999999864
No 28
>PRK09230 cytosine deaminase; Provisional
Probab=100.00 E-value=1.8e-38 Score=306.76 Aligned_cols=372 Identities=16% Similarity=0.210 Sum_probs=257.5
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
...++|+|++|++ +. . . .+|.|++|+|++|++..+.. .++.++||++|++|+|||||+|+|+....+++.
T Consensus 3 ~~~~li~~~~~~~--~~-~-~--~~i~i~~g~I~~i~~~~~~~----~~~~~~id~~g~~v~PGlid~H~H~~~~~~~~~ 72 (426)
T PRK09230 3 NALMTIKNARLPG--KE-G-L--WQITIEDGKISAIEPQSEAS----LEAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGE 72 (426)
T ss_pred CceEEEECcEEcC--CC-e-e--EEEEEECCEEEEecCCCCCC----CCCCceEeCCCCEeccceeEEEEccccceecCC
Confidence 4679999999984 32 1 2 49999999999999864311 125679999999999999999999998877775
Q ss_pred c---CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc---C---HHHHHHHHHHhCCeEEeec
Q 012333 98 A---DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---H---VSEMAKAVELLGLRACLVQ 168 (466)
Q Consensus 98 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~---~---~~~~~~~~~~~g~~~~~~~ 168 (466)
. ...++.+|+... +.....+++++.+......+.+++++|+|+++++-.. . ...+.++........-...
T Consensus 73 ~~~~~~~~l~~~i~~~-~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~~~~~~~a~~~~~~~~~~~~~~~i 151 (426)
T PRK09230 73 PNWNQSGTLFEGIERW-AERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQI 151 (426)
T ss_pred CccCCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCcchhHHHHHHHHHHHhhCcceEEE
Confidence 4 456688998763 6666778888889999999999999999999875421 1 1222333333221111111
Q ss_pred ccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccC--CHHHHHHHHHHHHHcCCccceeccCC
Q 012333 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNA--TDRLLLETRDMAREFKTGIHMHVAEI 246 (466)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~l~~~~~~a~~~~~~v~~H~~~~ 246 (466)
.... ..++-. ...... .++...+.+...+ ...++..+.. +++.+.+++++|+++|+++++|+.+.
T Consensus 152 ~a~~-~~~~~~---~~~~~~-------~l~~a~~~~~~~v--g~~p~~~~~~~~~~e~l~~~~~~A~~~g~~~~~H~~E~ 218 (426)
T PRK09230 152 VAFP-QEGILS---YPNGEA-------LLEEALRLGADVV--GAIPHFEFTREYGVESLHKAFALAQKYDRLIDVHCDEI 218 (426)
T ss_pred Eecc-CccccC---CccHHH-------HHHHHHHcCCCEE--eCCCCccccchhHHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 1100 000000 001111 2222222222212 2333443333 57889999999999999999999987
Q ss_pred cchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecC-------ChhhHHHHHhcCCeEEECccchhhc---------
Q 012333 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-------NHTEIGLLSRAGVKVSHCPASAMRM--------- 310 (466)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-------~~~~~~~~~~~g~~~~~~p~~~~~~--------- 310 (466)
..+...... ...+.+...+ ++.+.+..||.++ ++++++++++.|+.+++||.+++++
T Consensus 219 ~~~~~~~~~------~~~~~~~~~g-l~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~cP~sn~~l~~~~~~~p~ 291 (426)
T PRK09230 219 DDEQSRFVE------TVAALAHREG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPK 291 (426)
T ss_pred CCcchHHHH------HHHHHHHHhC-CCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhcCCCCCCCC
Confidence 655432211 2466677777 6788999999999 5789999999999999999999865
Q ss_pred -cCCccHHHHHHcCCcEEEccCCCCC----CCCCCHHHHHHHHHHHhcccccccCCCCCCCCC-CHHHHHHHHhHHHHHH
Q 012333 311 -LGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAAL-PAETVLRMATINGAKS 384 (466)
Q Consensus 311 -~~~~~~~~~~~~gi~~~~gsD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-s~~~al~~~T~~~A~~ 384 (466)
.+..|+++++++|+++++|||+... ....+++..++.+....+.. .. ++.++++++|.+||++
T Consensus 292 ~~g~~pi~~l~~aGv~V~lGTD~~~d~~~~~~~~d~~~~~~~~~~~~~~~-----------~~~~~~~~l~maT~~gA~a 360 (426)
T PRK09230 292 RRGITRVKEMLEAGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLM-----------GYGQINDGLNLITTHSART 360 (426)
T ss_pred CCCCcCHHHHHHCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHHhhC-----------ChhhHHHHHHHHhcchhHH
Confidence 4567899999999999999997531 12357777777654433211 01 3679999999999999
Q ss_pred cCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEEC
Q 012333 385 VLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 444 (466)
Q Consensus 385 lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~ 444 (466)
+|+++ .| |++||.||||+++.+.+ .+.+ .....++.|+++|++|+..
T Consensus 361 lg~~~-~g-le~G~~ADlv~~~~~~~-----~~~~------~~~~~~~~v~~~G~~v~~~ 407 (426)
T PRK09230 361 LNLQD-YG-IEVGNPANLIILPAENG-----FDAV------RRQVPVRYSIRHGKVIAET 407 (426)
T ss_pred hCCCC-cC-CCCCCcCCEEEEeCCCH-----HHHH------hccCCceEEEECCEEEecc
Confidence 99976 78 99999999999997521 1111 1135789999999999875
No 29
>PLN02942 dihydropyrimidinase
Probab=100.00 E-value=1.6e-38 Score=312.68 Aligned_cols=388 Identities=18% Similarity=0.239 Sum_probs=247.1
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
.+.|++|+|++|++.+. ...++|+|+||+|++|++.... + .+.++||++|++|+|||||+|+|+....+.
T Consensus 3 ~~~~lli~~~~v~~~~~----~~~~~i~I~~g~I~~i~~~~~~----~-~~~~~iD~~g~~v~PG~ID~H~H~~~~~~~- 72 (486)
T PLN02942 3 SSTKILIKGGTVVNAHH----QELADVYVEDGIIVAVAPNLKV----P-DDVRVIDATGKFVMPGGIDPHTHLAMPFMG- 72 (486)
T ss_pred CCCcEEEECcEEEcCCC----CeEeEEEEECCEEEEEcCCCCC----C-CCCeEEECCCCEEecCEeeeeeccCcccCC-
Confidence 46789999999997442 2456999999999999875321 1 256899999999999999999999542210
Q ss_pred ccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC---HHHHHHHHHHhCCeEEeecccccC
Q 012333 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDC 173 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~ 173 (466)
....++ .....+.++.+||||+.|+.... .....+.......+.........
T Consensus 73 --------------------~~~~ed----~~s~s~aAl~gGvTTv~D~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 127 (486)
T PLN02942 73 --------------------TETIDD----FFSGQAAALAGGTTMHIDFVIPVNGNLLAGYEAYEKKAEKSCMDYGFHM- 127 (486)
T ss_pred --------------------Ccccch----HHHHHHHHHcCCCeEEEeCCCCCCCCHHHHHHHHHHHHhhcCCCEEEEE-
Confidence 111111 22244668999999999984221 12222222222111111100000
Q ss_pred CCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHH
Q 012333 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 253 (466)
+... .......+..++.+.. +...++.++.++.....+++.+.+.++.+++++.++++|+.+ .......
T Consensus 128 --~~~~-----~~~~~~~e~~~l~~~~---gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~HaE~-~~~~~~~ 196 (486)
T PLN02942 128 --AITK-----WDDTVSRDMETLVKEK---GINSFKFFMAYKGSLMVTDELLLEGFKRCKSLGALAMVHAEN-GDAVFEG 196 (486)
T ss_pred --EecC-----CcHhHHHHHHHHHHhC---CCceEEEEEecCCCCCCCHHHHHHHHHHHHhcCCeEEEEcCC-HHHHHHH
Confidence 0000 0111122223332222 224477666666666678899999999999999999999644 3322211
Q ss_pred Hhh---cCC-C-------Cc-------hHHHHhhhccCCCCeeEEEeecCCh-hhHHHHHhcCCeEEECccchh-h----
Q 012333 254 MDT---RKV-D-------HG-------TVTFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKVSHCPASAM-R---- 309 (466)
Q Consensus 254 ~~~---~~~-~-------~~-------~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~g~~~~~~p~~~~-~---- 309 (466)
... .+. + .. ....+...+.++.+..+.|+.+... +.++.+++.|+.++.+|.... .
T Consensus 197 ~~~~~~~G~~~~~~~~~~rP~~~E~~av~~~~~la~~~g~~~~i~H~s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~ 276 (486)
T PLN02942 197 QKRMIELGITGPEGHALSRPPLLEGEATARAIRLAKFVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDS 276 (486)
T ss_pred HHHHHHcCCCChhhhhccCCchHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEECchhheeCHH
Confidence 111 111 0 00 1122334456678899999999888 899999999988876665311 1
Q ss_pred --------c----cCCccH---------HHHHHcCCcEEEccCCCCCCCCCCHHH--------------HHHHHHHHhcc
Q 012333 310 --------M----LGFAPI---------KEMLHADICVSLGTDGAPSNNRMSIVD--------------EMYLASLINKG 354 (466)
Q Consensus 310 --------~----~~~~~~---------~~~~~~gi~~~~gsD~~~~~~~~~~~~--------------~~~~~~~~~~~ 354 (466)
. .-.+|+ +.+++.|+++++||||.|++...+++. ++....+.++.
T Consensus 277 ~~~~~~~~~~~~~k~~PPlr~~~~~~~L~~~l~~G~i~~igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~ 356 (486)
T PLN02942 277 KLWDPDFTIASKYVMSPPIRPAGHGKALQAALSSGILQLVGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTM 356 (486)
T ss_pred HhcCcccccCcceEECCCCCCHHHHHHHHHHhcCCceEEEECCCCCCChHHhhcccCCHhhCCCCcccHHHHHHHHHHHH
Confidence 1 012465 588999999999999988754333221 12222222111
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCC---cCCcccceecccC--CC
Q 012333 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP---VHDRITSLVYCMR--TE 429 (466)
Q Consensus 355 ~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~---~~~~~~~~~~~~~--~~ 429 (466)
. ....++++++++++|.|||+++|+++++|+|++|++||||++|++.....+ +.++....+|... ..
T Consensus 357 ~--------~~~~i~~~~~l~~~t~~pA~~lgl~~~~G~l~~G~~ADlv~vd~~~~~~v~~~~~~s~~~~~py~g~~l~g 428 (486)
T PLN02942 357 V--------ESGQISPTDYVRVTSTECAKIFNIYPRKGAILAGSDADIIILNPNSTFTISAKTHHSRIDTNVYEGRRGKG 428 (486)
T ss_pred H--------HcCCCCHHHHHHHHHHHHHHHhCCCCCCCCcCCCCcCCEEEEcCCccEEEcHHHccccCCCCCccCcEeee
Confidence 0 112499999999999999999999777899999999999999998443333 2455555666665 57
Q ss_pred CeeEEEEccEEEEECCeeeecc-HHHHHHH
Q 012333 430 NVVSVMCNGQWVMKNKKILLLM-RGRLFQL 458 (466)
Q Consensus 430 ~v~~v~v~G~~v~~~g~~~~~~-~~~~~~~ 458 (466)
+|..||++|++||++|+++... .|+++++
T Consensus 429 ~v~~tiv~G~~v~~~g~~~~~~~~G~~~~~ 458 (486)
T PLN02942 429 KVEVTISQGRVVWENGELKVVRGSGRYIEM 458 (486)
T ss_pred eEEEEEECCEEEEECCEEeccCCCceEecC
Confidence 8999999999999999986544 4777654
No 30
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=100.00 E-value=1.8e-38 Score=305.52 Aligned_cols=352 Identities=21% Similarity=0.264 Sum_probs=235.3
Q ss_pred eceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc-----cCCCCchHhhhhc--c
Q 012333 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR--I 111 (466)
Q Consensus 39 ~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~-----~~~~~~~~~~~~~--~ 111 (466)
++++|+|++|+|++|++....+ ...+.++||++|++|+|||||+|+|++....++. ..+.++.+|+... .
T Consensus 2 ~~~~v~i~~g~I~~vg~~~~~~---~~~~~~~iD~~g~~v~PGlin~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (377)
T TIGR01224 2 EDAVILIHGGKIVWIGQLAALP---GEEATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGI 78 (377)
T ss_pred CceEEEEECCEEEEEechhhCC---cccCCeEEeCCCCEEcccEEecccCccccCCcHHHHHHHhCCCCHHHHHHhcCCh
Confidence 4679999999999999843221 1125689999999999999999999987665552 3566888998652 2
Q ss_pred ---ccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc--cCH---HHHHHHHHH----hCCeEEeecccccCCCCCCc
Q 012333 112 ---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHV---SEMAKAVEL----LGLRACLVQSTMDCGEGLPA 179 (466)
Q Consensus 112 ---~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~--~~~---~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~ 179 (466)
++....+++++.+......+.+++++|||++..... ... ....++.++ .+++...... .. ..++.
T Consensus 79 ~~~~~~~~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~~~--~~-~~~~~ 155 (377)
T TIGR01224 79 LSTVRATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTTFL--GA-HAVPP 155 (377)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeee--ec-ccCCc
Confidence 256677888898889888999999999999843211 111 122333332 4444432211 11 01111
Q ss_pred ccccCChHHHHHHH-HHHHHHhccCCCCCeEE--EEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhh
Q 012333 180 SWAVRTTDDCIQSQ-KELYAKHHHAADGRIRI--WFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (466)
Q Consensus 180 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (466)
.+.. .....+... ...++++...+ .+.. ..+.+. ..+.+.+.++++.|+++|+++.+|+.+.....
T Consensus 156 ~~~~-~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~--~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~------ 224 (377)
T TIGR01224 156 EFQG-RPDDYVDGICEELIPQVAEEG--LASFADVFCEAG--VFSVEQSRRILQAAQEAGLPVKLHAEELSNLG------ 224 (377)
T ss_pred cccC-CHHHHHHHHHHHHHHHHHHhC--CCCeeEEEecCC--CcCHHHHHHHHHHHHHCCCCEEEEecCCCCCC------
Confidence 1101 111222211 22333333211 2222 133322 34567899999999999999999997643211
Q ss_pred cCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCC-
Q 012333 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP- 334 (466)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~- 334 (466)
..+.....+ ...+.|+.++++++++++++.|+.+++||.+++.+ .+.+|++++++.|+++++|||+.+
T Consensus 225 ------~~~~~~~~g----~~~~~H~~~~~~~~l~~la~~g~~~~~~P~~~~~l~~~~~p~~~l~~~Gv~v~lgTD~~~~ 294 (377)
T TIGR01224 225 ------GAELAAKLG----AVSADHLEHASDAGIKALAEAGTVAVLLPGTTFYLRETYPPARQLIDYGVPVALATDLNPG 294 (377)
T ss_pred ------HHHHHHHcC----CCccHHHhcCCHHHHHHHHhcCCEEEECchHHHhcCCcCccHHHHHHCCCCEEEECCCCCC
Confidence 122222222 23467999999999999999999999999998776 467899999999999999999754
Q ss_pred CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCC
Q 012333 335 SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (466)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~ 414 (466)
.++..+++..+..... ..+++++++++++|.+||+++|+++++|+|++||.|||||+|.+.+..
T Consensus 295 ~~~~~~~~~~~~~~~~--------------~~~ls~~eal~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~-- 358 (377)
T TIGR01224 295 SSPTLSMQLIMSLACR--------------LMKMTPEEALHAATVNAAYALGLGEERGTLEAGRDADLVILSAPSYAE-- 358 (377)
T ss_pred CChhHHHHHHHHHHHH--------------hcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEEcCCChHH--
Confidence 3222223333222211 124999999999999999999998779999999999999999994322
Q ss_pred cCCcccceecccCCCCeeEEEEccEE
Q 012333 415 VHDRITSLVYCMRTENVVSVMCNGQW 440 (466)
Q Consensus 415 ~~~~~~~~~~~~~~~~v~~v~v~G~~ 440 (466)
+++.....+|..||++|++
T Consensus 359 -------~~~~~~~~~v~~v~v~G~~ 377 (377)
T TIGR01224 359 -------IPYHYGVNHVHAVIKNGNI 377 (377)
T ss_pred -------hhhhcCCCCceEEEECCCC
Confidence 2223345689999999984
No 31
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=100.00 E-value=8.1e-38 Score=301.51 Aligned_cols=207 Identities=21% Similarity=0.166 Sum_probs=159.1
Q ss_pred cccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhc
Q 012333 217 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA 296 (466)
Q Consensus 217 ~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 296 (466)
....+++.+.++++.|.+.|+++.+|+............ ........+..+.++.+.|...+++++++++++.
T Consensus 315 ~~l~~~e~l~~~v~~a~~~gl~v~vHAiGD~Av~~~Lda-------fE~~~~~~~~~~~r~rieH~~~v~~~~i~R~~~L 387 (535)
T COG1574 315 ELLLTEEELEELVRAADERGLPVAVHAIGDGAVDAALDA-------FEKARKKNGLKGLRHRIEHAELVSPDQIERFAKL 387 (535)
T ss_pred CcccCHHHHHHHHHHHHHCCCcEEEEEechHHHHHHHHH-------HHHHhhhcCCccCCceeeeeeecCHhHHHHHHhc
Confidence 445789999999999999999999999775433221111 1111122223345688999999999999999999
Q ss_pred CCeEEECccchhh-------------ccCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCC
Q 012333 297 GVKVSHCPASAMR-------------MLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 363 (466)
Q Consensus 297 g~~~~~~p~~~~~-------------~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (466)
|+.++++|.+... ....+|++.+++.|+++++|||++.. ..++|..++.+.............
T Consensus 388 gv~~svQP~f~~~~~~~~~~rlG~~r~~~~~p~~~ll~~G~~la~gSD~Pv~--~~dP~~~i~~AVtr~~~~g~~~~~-- 463 (535)
T COG1574 388 GVIASVQPNFLFSDGEWYVDRLGEERASRSYPFRSLLKAGVPLAGGSDAPVE--PYDPWLGIYAAVTRKTPGGRVLGP-- 463 (535)
T ss_pred CceEeeccccccccchHHHHhhhhhhhhccCcHHHHHHCCCeEeccCCCCCC--CCChHHHHHHHHcCCCCCCCCCcc--
Confidence 9999999875531 13467999999999999999999873 468999999887654432211100
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEE
Q 012333 364 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 443 (466)
Q Consensus 364 ~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 443 (466)
...||+++||+++|.++|.+.+.++++|+|++||.|||+|+|.|.|...|.. + ...+++.||++|++||+
T Consensus 464 -~~~L~~~eAL~~yT~~~A~a~~~e~~~G~Le~G~~AD~~Vld~d~f~~~~~~--i-------~~~~v~~T~~~Gk~VY~ 533 (535)
T COG1574 464 -EERLTREEALRAYTEGGAYASGAEGEKGSLEPGKLADFAVLDRDPFTVDPDS--I-------KDTKVVLTIVAGKVVYR 533 (535)
T ss_pred -ccccCHHHHHHHHhhhhHHhhhccccccccccCceeeEEEecCCcccCChHH--h-------ccceEEEEEEcCeEeec
Confidence 1159999999999999999999999999999999999999999966644321 2 23699999999999997
Q ss_pred C
Q 012333 444 N 444 (466)
Q Consensus 444 ~ 444 (466)
.
T Consensus 534 ~ 534 (535)
T COG1574 534 A 534 (535)
T ss_pred C
Confidence 4
No 32
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=100.00 E-value=2.1e-38 Score=311.47 Aligned_cols=375 Identities=19% Similarity=0.233 Sum_probs=235.9
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|++.++ ..+++|+|+||+|++|++.... + .+.++||++|++|+|||||+|+|+.....
T Consensus 1 lli~~~~v~~~~~----~~~~~i~I~~g~I~~ig~~~~~----~-~~~~viD~~g~~vlPGlID~H~H~~~~~~------ 65 (447)
T cd01314 1 LIIKNGTIVTADG----SFKADILIEDGKIVAIGPNLEA----P-GGVEVIDATGKYVLPGGIDPHTHLELPFM------ 65 (447)
T ss_pred CEEECCEEECCCC----ceeeeEEEECCEEEEeeCCCCC----C-CCceEEECCCCEEecCEEecccccccccc------
Confidence 4799999997542 3467999999999999875321 1 24589999999999999999999953211
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCH-HHHHHHHHHhCCeEEeecccccCCCCCCc
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-SEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 179 (466)
.....++.+ ...+.++.+||||+++++.... ....++......+. ......+.+ ...
T Consensus 66 ---------------~~~~~e~~~----~~~~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~--~~~ 123 (447)
T cd01314 66 ---------------GTVTADDFE----SGTRAAAAGGTTTIIDFAIPNKGQSLLEAVEKWRGKA-DGKSVIDYG--FHM 123 (447)
T ss_pred ---------------CccCcchHH----HHHHHHHhCCCcEEEeCCCCCCCCCHHHHHHHHHHHh-cCCCcccEE--EEE
Confidence 011222222 2234567899999999863221 12222222211110 011111111 000
Q ss_pred ccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhc--
Q 012333 180 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR-- 257 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~-- 257 (466)
.. .......+.+..+.. +.+...++.++.++..+..+++.+.++++.+++++.++++|+ +............
T Consensus 124 ~~-~~~~~~~~~~~~~l~----~~g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H~-E~~~~~~~~~~~~~~ 197 (447)
T cd01314 124 II-TDWTDSVIEELPELV----KKGISSFKVFMAYKGLLMVDDEELLDVLKRAKELGALVMVHA-ENGDVIAELQKKLLA 197 (447)
T ss_pred ee-cCCChHHHHHHHHHH----HcCCCEEEEEeccCCCCCCCHHHHHHHHHHHHhcCCeEEEEc-CCHHHHHHHHHHHHH
Confidence 00 001122233333332 234456887777777788899999999999999999999997 4444333222211
Q ss_pred -CCCC-------chH--------HHHhhhccCCCCeeEEEeecCCh-hhHHHHHhcCCeE--EECccchhhc--------
Q 012333 258 -KVDH-------GTV--------TFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKV--SHCPASAMRM-------- 310 (466)
Q Consensus 258 -~~~~-------~~~--------~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~g~~~--~~~p~~~~~~-------- 310 (466)
+... .+. ..+...+.++.+.++.|...... +.++.+++.|+.+ .+||.+.+..
T Consensus 198 ~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~~~~~H~s~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~~ 277 (447)
T cd01314 198 QGKTGPEYHALSRPPEVEAEATARAIRLAELAGAPLYIVHVSSKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKDW 277 (447)
T ss_pred cCCCChHHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhcccc
Confidence 2110 011 12333445677777777765322 3577788888765 5899873211
Q ss_pred -cC-----Ccc---------HHHHHHcCCcEEEccCCCCCCCCCCHHH--------------HHHHHHHHhcccccccCC
Q 012333 311 -LG-----FAP---------IKEMLHADICVSLGTDGAPSNNRMSIVD--------------EMYLASLINKGREVFANG 361 (466)
Q Consensus 311 -~~-----~~~---------~~~~~~~gi~~~~gsD~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ 361 (466)
.+ .+| +.+++++|+.+++|||+.+++...+++. +++...+.++..
T Consensus 278 ~~g~~~~~~pplr~~~~~~~l~~~l~~G~i~~igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~------ 351 (447)
T cd01314 278 FEGAKYVCSPPLRPKEDQEALWDGLSSGTLQTVGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRMPLLWSEGV------ 351 (447)
T ss_pred ccccceEECCCCCChHHHHHHHHHHhCCCeeEEECCCCCCCHHHhhcccCCHhhCCCCCchHhhhHHHHHHHHH------
Confidence 00 134 5589999999999999998764433332 455555554321
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCC--------CcCCcccceecccCCCCeeE
Q 012333 362 TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV--------PVHDRITSLVYCMRTENVVS 433 (466)
Q Consensus 362 ~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~--------~~~~~~~~~~~~~~~~~v~~ 433 (466)
....++++++++++|.|||++||+.+++|+|++|++|||||+|.+..... +..+|+....+. .+|..
T Consensus 352 --~~~~~~~~~~~~~~t~~pA~~~gl~~~~G~l~~G~~AD~vi~d~~~~~~~~~~~~~~~~~~~~~~g~~~~---g~v~~ 426 (447)
T cd01314 352 --AKGRITLEKFVELTSTNPAKIFGLYPRKGTIAVGSDADLVIWDPNAEKTISADTHHHNVDYNIFEGMKVK---GWPVV 426 (447)
T ss_pred --HcCCCCHHHHHHHHhhHHHHHhCCCCCCCccCCCCcCCEEEEeCCcCEEecHHHhhccCCCCcccCeEEe---eeEEE
Confidence 11249999999999999999999987899999999999999999842211 223444444332 48999
Q ss_pred EEEccEEEEECCeeee
Q 012333 434 VMCNGQWVMKNKKILL 449 (466)
Q Consensus 434 v~v~G~~v~~~g~~~~ 449 (466)
||++|++||++|+++.
T Consensus 427 t~v~G~~v~~~~~~~~ 442 (447)
T cd01314 427 TISRGKVVVEDGELVG 442 (447)
T ss_pred EEECCEEEEECCEEec
Confidence 9999999999999874
No 33
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=100.00 E-value=5.8e-38 Score=309.56 Aligned_cols=380 Identities=16% Similarity=0.210 Sum_probs=236.1
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|+++++ ..+++|+|+||+|++|++.... + .+.++||++|++|+|||||+|+|+....
T Consensus 1 ~li~n~~vv~~~~----~~~~~V~I~dg~I~~Ig~~~~~----~-~~~~vIDa~G~~vlPGlID~H~H~~~~~------- 64 (454)
T TIGR02033 1 KLIRGGTVVNADD----VFQADVLIEGGKIVAVGRNLSP----P-DAVEEIDATGKYVMPGGIDVHTHLEMPF------- 64 (454)
T ss_pred CEEECcEEEcCCC----ceEEEEEEECCEEEEecCCCCC----C-CCCcEEECCCCEEecCEecceeccCccc-------
Confidence 4799999997543 2457999999999999874321 1 2458999999999999999999984311
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC----HHHHHHHHHHhCCe-EEeecccccCCC
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVELLGLR-ACLVQSTMDCGE 175 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~----~~~~~~~~~~~g~~-~~~~~~~~~~~~ 175 (466)
......++.+. ..+.++.+||||+++++... .....+........ ..........
T Consensus 65 --------------~~~~~~e~~~~----~s~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 124 (454)
T TIGR02033 65 --------------GGTVTADDFFT----GTKAAAAGGTTTIIDFALPHKGESLTEALETWHEKAEGKSVIDYGFHMM-- 124 (454)
T ss_pred --------------CCCCCcchHHH----HHHHHHhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhccCceEEEEEEec--
Confidence 01122222222 23457789999999986432 12222222221111 1111011000
Q ss_pred CCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh
Q 012333 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (466)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 255 (466)
.+ ......+.+ ..+.+.+.+...++.++.++..+..+++.+.++++.+++++.++++|+ +..........
T Consensus 125 -~~-----~~~~~~~~~---~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~-E~~~~~~~~~~ 194 (454)
T TIGR02033 125 -IT-----HWNDEVLEE---HIPELVEEGITSFKVFMAYKNLLMVDDEELFEILKRAKELGALLQVHA-ENGDVIAELQA 194 (454)
T ss_pred -cc-----CCcHHHHHH---HHHHHHhcCCcEEEEEeecCCCCCCCHHHHHHHHHHHHhCCCeEEEEc-CCHHHHHHHHH
Confidence 00 011111222 222233344456887777777778899999999999999999999997 44433221111
Q ss_pred h---cCCCC-------chH--------HHHhhhccCCCCeeEEEeec-CChhhHHHHHhcCCe--EEECccchh------
Q 012333 256 T---RKVDH-------GTV--------TFLDKIEFLQNNLLSAHTVW-VNHTEIGLLSRAGVK--VSHCPASAM------ 308 (466)
Q Consensus 256 ~---~~~~~-------~~~--------~~~~~~~~~~~~~~~~H~~~-~~~~~~~~~~~~g~~--~~~~p~~~~------ 308 (466)
. .+... .+. ..+...+.++.+..+.|... .+-+.++.+++.|+. +.+||.+.+
T Consensus 195 ~~~~~G~~~~~~~~~~~p~~~e~~~v~~~~~~~~~~~~~~~i~H~s~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~ 274 (454)
T TIGR02033 195 RLLAQGKTGPEYHALSRPPESEAEAVARAIALAALANAPLYVVHVSTASAVDEIAEAREKGQPVYGETCPQYLLLDDTIY 274 (454)
T ss_pred HHHHcCCCChhHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCchheeecHHHh
Confidence 1 11100 011 11333344566666666655 224677788888855 569998752
Q ss_pred -----hc-cC--Ccc---------HHHHHHcCCcEEEccCCCCCCCCCC------HH---------HHHHHHHHHhcccc
Q 012333 309 -----RM-LG--FAP---------IKEMLHADICVSLGTDGAPSNNRMS------IV---------DEMYLASLINKGRE 356 (466)
Q Consensus 309 -----~~-~~--~~~---------~~~~~~~gi~~~~gsD~~~~~~~~~------~~---------~~~~~~~~~~~~~~ 356 (466)
.. .. .+| ++.+++.|+.+++|||+.|++...+ .+ .++....++++..
T Consensus 275 ~~~~~~~~~~~~~pPlr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~e~~l~~l~~~~v- 353 (454)
T TIGR02033 275 DKPGFEGAKYVCSPPLREKEDQDALWSALSSGALQTVGSDHCPFNFAQKKAIGKDDFTKIPNGGPGVEERMTLLFDEGV- 353 (454)
T ss_pred cCcccccceeEECCCCCChhhHHHHHHHhhcCCeEEEECCCCCCCHHHhhhcccCCHhhCCCCCchHHhHHHHHHHHHH-
Confidence 11 11 146 5699999999999999988752111 11 1444444443211
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCC--------CCcCCcccceecccCC
Q 012333 357 VFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPM--------VPVHDRITSLVYCMRT 428 (466)
Q Consensus 357 ~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~--------~~~~~~~~~~~~~~~~ 428 (466)
....++++++++++|.|||++||+++++|+|++|++|||+|+|.+.... .+..+|+..+.. .
T Consensus 354 -------~~~~~~~~~~~~~~t~~pa~~~gl~~~~G~l~~G~~AD~~i~d~~~~~~~~~~~~~~~~~~~p~~g~~~---~ 423 (454)
T TIGR02033 354 -------ATGRITLEKFVELTSTNPAKIFNMYPRKGTIAVGSDADIVIWDPNRTTVISAETHHDNADYNPFEGFKV---Q 423 (454)
T ss_pred -------HcCCCCHHHHHHHHhhHHHHHcCCCCCCCccccCCcCCEEEEcCCcCeeechHHhhccCCCCcccCeEE---e
Confidence 1124899999999999999999997678999999999999999984321 123344444332 2
Q ss_pred CCeeEEEEccEEEEECCeeeecc-HHHHHH
Q 012333 429 ENVVSVMCNGQWVMKNKKILLLM-RGRLFQ 457 (466)
Q Consensus 429 ~~v~~v~v~G~~v~~~g~~~~~~-~~~~~~ 457 (466)
.+|..||++|++||++|+++... .|++++
T Consensus 424 g~v~~t~v~G~~v~~~g~~~~~~~~g~~~~ 453 (454)
T TIGR02033 424 GAVVSVLSRGRVVVEDGQFVGTAGSGRFIK 453 (454)
T ss_pred eeEEEEEECCEEEEECCEEecCCCCcceec
Confidence 58999999999999999987543 466553
No 34
>PRK14085 imidazolonepropionase; Provisional
Probab=100.00 E-value=5.7e-37 Score=294.12 Aligned_cols=344 Identities=18% Similarity=0.272 Sum_probs=227.1
Q ss_pred ceEEEEc-cEEEeecCCc-----ceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccc
Q 012333 19 STMILHN-AVIVTMDKES-----RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (466)
Q Consensus 19 ~~~lI~n-~~i~~~d~~~-----~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~ 92 (466)
++++|+| +.|+++|+.. .++++++|+|++|+|++|++..+. + .+.++||++|++|+|||||+|+|+...
T Consensus 1 ~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~----~-~~~~~iD~~g~~v~PGlId~H~Hl~~~ 75 (382)
T PRK14085 1 MSTLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADA----P-AADERVDAGGRAVLPGFVDSHSHLVFA 75 (382)
T ss_pred CcEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccC----C-CCCeEEeCCCCEEecCeEecCcCcccc
Confidence 4789999 5999987654 678899999999999999985432 1 256899999999999999999999764
Q ss_pred ccccccCCCCchHhhhhcc---------ccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC--HHHHHHHHHHhC
Q 012333 93 LAKGIADDVDLMTWLHDRI---------WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--VSEMAKAVELLG 161 (466)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~--~~~~~~~~~~~g 161 (466)
..++. ++.++..+.. ++....+++++.+......+.+++++|||++++.+... .....+..+..+
T Consensus 76 ~~r~~----~~~~~~~~~~~~~~~i~~~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~~~~~~~~~~~~~~~~ 151 (382)
T PRK14085 76 GDRSA----EFAARMAGEPYSAGGIRTTVAATRAASDEELRANVRRLVAEALRQGTTTVETKTGYGLTVEDEARSARIAA 151 (382)
T ss_pred CChhH----HHHhhhcCCCccCCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcCCCCHHHHHHHHHHHH
Confidence 44431 1111111111 22344567788888888999999999999999976432 333333332222
Q ss_pred CeEEeecccccCCCCCCcccccCChHHHHHHHH-HHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccc
Q 012333 162 LRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK-ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 240 (466)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 240 (466)
+........ .+...++.+. ......+.... ..+...... ...++++... ...+.+++.++++.++++|+++.
T Consensus 152 -~~~~~~~~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~idi~~~~---~~~~~~~l~~~~~~a~~~g~~v~ 224 (382)
T PRK14085 152 -EFTDEVTFL-GAHVVPPEYA-GDADEYVDLVCGPMLDAVAPH-ARWIDVFCER---GAFDEDQSRRVLTAGRAAGLGLR 224 (382)
T ss_pred -Hhhhcceee-ccccCCcccC-CCHHHHHHHHHHHHHHHHHHh-CCeEEEEecC---CCCCHHHHHHHHHHHHHcCCCeE
Confidence 111011111 1111222111 11222222111 111111111 3445543322 24577899999999999999999
Q ss_pred eeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHH
Q 012333 241 MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEM 319 (466)
Q Consensus 241 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~ 319 (466)
+|+.+..... ........+. ..+.|+.++++++++++++.|+.+++||.+++.. .+.++++++
T Consensus 225 ~H~~~~~~~~------------~v~~~~~~g~----~~i~H~~~l~~~~~~~la~~gv~~~~~P~~~~~~~~~~~~~~~l 288 (382)
T PRK14085 225 VHGNQLGPGP------------GVRLAVELGA----ASVDHCTYLTDADVDALAGSGTVATLLPGAEFSTRQPYPDARRL 288 (382)
T ss_pred EEeCcccCCh------------HHHHHHHcCC----CcHHHhCCCCHHHHHHHHHcCCEEEECcHHHHhcCCCCchHHHH
Confidence 9997532110 1222222222 2377999999999999999999999999988755 457899999
Q ss_pred HHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCc
Q 012333 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399 (466)
Q Consensus 320 ~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ 399 (466)
++.|+++++|||+++.. .+...+....... ....+++++++++++|.+||+++|++ .+|+|++|+.
T Consensus 289 ~~aGv~v~lgsD~~~~~---~~~~~~~~~~~~~----------~~~~~l~~~~al~~aT~~~A~~lg~~-~~G~l~~G~~ 354 (382)
T PRK14085 289 LDAGVTVALASDCNPGS---SYTSSMPFCVALA----------VRQMGMTPAEAVWAATAGGARALRRD-DVGVLAVGAR 354 (382)
T ss_pred HHCCCcEEEEeCCCCCC---ChHHHHHHHHHHH----------HHhcCCCHHHHHHHHHHHHHHHcCCC-CCCCcCCCCC
Confidence 99999999999986432 1222222221110 01235999999999999999999996 4899999999
Q ss_pred cCEEEEcCC
Q 012333 400 ADMVVVDPF 408 (466)
Q Consensus 400 ADlvv~d~~ 408 (466)
|||+|+|.+
T Consensus 355 ADlvv~d~~ 363 (382)
T PRK14085 355 ADLHVLDAP 363 (382)
T ss_pred CCEEEEcCC
Confidence 999999998
No 35
>PRK08323 phenylhydantoinase; Validated
Probab=100.00 E-value=6.6e-38 Score=309.19 Aligned_cols=378 Identities=17% Similarity=0.184 Sum_probs=235.7
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
+|++|+|++|+++++ ..+++|+|+||+|++|++. .+.++||++|++|+|||||+|+|+....
T Consensus 1 ~d~li~n~~v~~~~~----~~~~~v~I~~g~I~~i~~~---------~~~~viD~~g~~v~PGlID~H~H~~~~~----- 62 (459)
T PRK08323 1 MSTLIKNGTVVTADD----TYKADVLIEDGKIAAIGAN---------LGDEVIDATGKYVMPGGIDPHTHMEMPF----- 62 (459)
T ss_pred CcEEEECCEEEcCCC----ceEEEEEEECCEEEEEecC---------CCceEEECCCCEEeccEEeeeecccccc-----
Confidence 478999999997432 3457999999999999864 1457999999999999999999984310
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC----HHHHHHHHHHhCC-eEEeecccccC
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVELLGL-RACLVQSTMDC 173 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~----~~~~~~~~~~~g~-~~~~~~~~~~~ 173 (466)
......++.+ ...+.++.+||||+++++... .....+....... +.........
T Consensus 63 ----------------~~~~~~e~~~----~~~~~a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 121 (459)
T PRK08323 63 ----------------GGTVSSDDFE----TGTRAAACGGTTTIIDFALQPKGQSLREALEAWHGKAAGKAVIDYGFHM- 121 (459)
T ss_pred ----------------CCccccCcHH----HHHHHHHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhccCceEEEEEEE-
Confidence 0011111111 123457789999999976321 1222222222111 1111100000
Q ss_pred CCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHH
Q 012333 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 253 (466)
. . .......+.+..+. .+.+...++.++.++..+..+.+++.++++.++++|.++++|+. ........
T Consensus 122 ~--~-----~~~~~~~~~~~~~~----~~~g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H~e-~~~~~~~~ 189 (459)
T PRK08323 122 I--I-----TDWNEVVLDEMPEL----VEEGITSFKLFMAYKGALMLDDDELLRALQRAAELGALPMVHAE-NGDAIAYL 189 (459)
T ss_pred E--e-----cCCcHHHHHHHHHH----HHcCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEcC-ChHHHHHH
Confidence 0 0 00111222222332 23333557777766666788999999999999999999999974 33332221
Q ss_pred Hhhc---CCC-------CchH--------HHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCeE--EECcc------c
Q 012333 254 MDTR---KVD-------HGTV--------TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKV--SHCPA------S 306 (466)
Q Consensus 254 ~~~~---~~~-------~~~~--------~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~~--~~~p~------~ 306 (466)
.... +.. ..+. ..+...+.++.+..+.|.... +-+.++.+++.|+.+ .+||+ +
T Consensus 190 ~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~~~~~~i~H~s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~ 269 (459)
T PRK08323 190 QAKLLAEGKTGPEYHALSRPPEVEGEATNRAIMLAELAGAPLYIVHVSCKEALEAIRRARARGQRVFGETCPQYLLLDES 269 (459)
T ss_pred HHHHHHcCCCChhhhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEEcCccceeecHH
Confidence 1110 110 0111 134444566677777776643 234677778888664 58998 4
Q ss_pred hhhcc----C-----Ccc---------HHHHHHcCCcEEEccCCCCCCCCCCHH---------------HHHHHHHHHhc
Q 012333 307 AMRML----G-----FAP---------IKEMLHADICVSLGTDGAPSNNRMSIV---------------DEMYLASLINK 353 (466)
Q Consensus 307 ~~~~~----~-----~~~---------~~~~~~~gi~~~~gsD~~~~~~~~~~~---------------~~~~~~~~~~~ 353 (466)
++... + .+| +.++++.|+.++++|||.|++...+.+ .+++...+.+.
T Consensus 270 ~~~~~~~~~g~~~k~~pPlr~~~~~~~l~~~l~~G~i~~i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~ 349 (459)
T PRK08323 270 EYDGPDWFEGAKYVMSPPLRDKEHQDALWRGLQDGDLQVVATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSE 349 (459)
T ss_pred HhcCCccccccceEECCCCCChHHHHHHHHHhhcCCeeEEECCCCCCChHHhcccccCCHhhCCCCcchHhhhHHHHHHH
Confidence 44321 1 133 668999999999999999875432221 33333333322
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCc--------CCcccceecc
Q 012333 354 GREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HDRITSLVYC 425 (466)
Q Consensus 354 ~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~~~~ 425 (466)
.. ....++++++++++|.|||+++|+.+++|+|++|++|||||||++.....+. .+|+..+.+
T Consensus 350 ~~--------~~~~~~~~~~~~~~t~~pA~~lgl~~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~s~~~g~~~- 420 (459)
T PRK08323 350 GV--------MTGRITLNRFVELTSTNPAKIFGLYPRKGTIAVGADADIVIWDPNATKTISASTLHSNVDYNPYEGFEV- 420 (459)
T ss_pred HH--------HcCCCCHHHHHHHHhhHHHHHhCCCCCCcccCCCCcCCEEEEcCCcccccCHHHHhhcCCCCcccCcEE-
Confidence 11 1124999999999999999999997778999999999999999983222221 223333222
Q ss_pred cCCCCeeEEEEccEEEEECCeeeec-cHHHHHHH
Q 012333 426 MRTENVVSVMCNGQWVMKNKKILLL-MRGRLFQL 458 (466)
Q Consensus 426 ~~~~~v~~v~v~G~~v~~~g~~~~~-~~~~~~~~ 458 (466)
..+|..||++|++|+++|+++.. ..|+++++
T Consensus 421 --~g~v~~viv~G~~v~~~g~~~~~~~~G~~~~~ 452 (459)
T PRK08323 421 --TGWPVTTLSRGEVVVEDGEFRGKAGHGRFLKR 452 (459)
T ss_pred --eeeEEEEEECCEEEEECCEEeccCCCceEeeC
Confidence 24899999999999999998764 36887764
No 36
>PRK07572 cytosine deaminase; Validated
Probab=100.00 E-value=1e-36 Score=296.02 Aligned_cols=370 Identities=16% Similarity=0.168 Sum_probs=246.8
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc-
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI- 97 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~- 97 (466)
++++|+|++|++ +. ...+|.|++|+|++|++.... ...++||++|++|+|||||+|+|+..+..++.
T Consensus 2 ~~~~i~~~~i~~--~~----~~~~i~i~~g~I~~v~~~~~~------~~~~~id~~g~~~~PG~id~h~h~~~~~~~~~~ 69 (426)
T PRK07572 2 FDLIVRNANLPD--GR----TGIDIGIAGGRIAAVEPGLQA------EAAEEIDAAGRLVSPPFVDPHFHMDATLSYGLP 69 (426)
T ss_pred CcEEEECeEECC--CC----eeEEEEEECCEEEEecCCCCC------CcCceEeCCCCEEcccceehhhCcchhhccCCC
Confidence 568999999995 32 134899999999999875321 24579999999999999999999988765553
Q ss_pred --cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeec---CccCH---HHHHHHHHHhCCeEEeecc
Q 012333 98 --ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA---GGQHV---SEMAKAVELLGLRACLVQS 169 (466)
Q Consensus 98 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~---~~~~~---~~~~~~~~~~g~~~~~~~~ 169 (466)
....++.+|+. ........++.++.+......+.+++++|+|+++++ +.... ....+.-...+.+......
T Consensus 70 ~~~~~g~l~e~l~-~~~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 148 (426)
T PRK07572 70 RVNASGTLLEGIA-LWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVAPYLDLQLV 148 (426)
T ss_pred CCCCCCCHHHHHH-HHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCcccHHHHHHHHHHHhhccceEEEE
Confidence 24556777772 222223346777888888889999999999999995 22221 2222222222222211111
Q ss_pred cccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCC--HHHHHHHHHHHHHcCCccceeccCCc
Q 012333 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNAT--DRLLLETRDMAREFKTGIHMHVAEIP 247 (466)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~l~~~~~~a~~~~~~v~~H~~~~~ 247 (466)
.. ...+ .+.. ....+..++.++ .+...+. ..++.....+ .+.++.++++|+++|+++++|+.+..
T Consensus 149 a~-~~~g---~~~~---~~~~~~~~~~l~----~g~d~iG--g~p~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~ 215 (426)
T PRK07572 149 AF-PQDG---VLRS---PGAVDNLERALD----MGVDVVG--GIPHFERTMADGAESVRLLCEIAAERGLRVDMHCDESD 215 (426)
T ss_pred ec-cChh---hccC---ccHHHHHHHHHH----cCCCEEe--CCCCCccccchHHHHHHHHHHHHHHcCCCeEEEECCCC
Confidence 11 0001 0000 011122222222 2222221 1233333333 38899999999999999999998766
Q ss_pred chhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh-------hhHHHHHhcCCeEEECccchhhc----------
Q 012333 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRM---------- 310 (466)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-------~~~~~~~~~g~~~~~~p~~~~~~---------- 310 (466)
......... ....+...++.+ +..+.|+.+++. +.++++++.|+.+++||.+++.+
T Consensus 216 ~~~~~~~~~------~~~~~~~~G~~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~~P~~n~~l~~~~~~~~~~ 288 (426)
T PRK07572 216 DPLSRHIET------LAAETQRLGLQG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIANPLINITLQGRHDTYPKR 288 (426)
T ss_pred ChhHHHHHH------HHHHHHHhCCCC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEECchhhhhhcCCCCCCCCC
Confidence 554332221 233445666665 788999988775 56999999999999999988654
Q ss_pred cCCccHHHHHHcCCcEEEccCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 311 LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 311 ~~~~~~~~~~~~gi~~~~gsD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
.+..+++.+++.|+++++|||+.. .....++++.++.+....+.. . ...+.++++++|.+||++||
T Consensus 289 ~g~~~v~~l~~~GV~v~lGtD~~~~~~~~~~~~~~~e~~~~~~~~~~~~--------~--~~~l~~~l~~aT~~~A~~lg 358 (426)
T PRK07572 289 RGMTRVPELMAAGINVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQMT--------G--QDAMRACFDAVTVNPARIMG 358 (426)
T ss_pred CCCcCHHHHHHCCCcEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHcCC--------C--HHHHHHHHHHhhcchHHhhC
Confidence 356789999999999999999842 223467888877654432211 0 12356788899999999999
Q ss_pred CCCcccccccCCccCEEEEcC-CCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECC
Q 012333 387 WDNDIGSLEAGKKADMVVVDP-FSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 445 (466)
Q Consensus 387 l~~~~G~i~~G~~ADlvv~d~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g 445 (466)
+++ .| |++||.||||++|. + |.++. .. ..++..||++|++|++..
T Consensus 359 l~~-~g-i~~G~~ADlvl~d~~~-----p~e~i-~~------~~~~~~V~~~G~~v~~~~ 404 (426)
T PRK07572 359 LEG-YG-LEPGCNADLVLLQARD-----PIEAI-RL------RAARLAVIRRGKVIARTP 404 (426)
T ss_pred CCC-cC-CCCCCcCCEEEEeCCC-----HHHHH-Hh------cCCceEEEECCEEEeccC
Confidence 976 67 99999999999995 5 44432 11 257999999999998864
No 37
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=100.00 E-value=3.9e-36 Score=287.79 Aligned_cols=356 Identities=15% Similarity=0.172 Sum_probs=233.7
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
+++++|+|++|++.. .......+|+|++|+|++|++... + ...++||++|++|+|||||+|+|+... +.
T Consensus 2 ~~~~li~~~~i~~~~--~~~~~~~~i~i~~g~I~~i~~~~~-----~-~~~~viD~~g~~v~PGliD~H~H~~~~---g~ 70 (379)
T PRK12394 2 KNDILITNGHIIDPA--RNINEINNLRIINDIIVDADKYPV-----A-SETRIIHADGCIVTPGLIDYHAHVFYD---GT 70 (379)
T ss_pred CccEEEECcEEECCC--CCcccccEEEEECCEEEEEcCCCC-----C-CCCeEEECCCCEEECCEEEeeecCCCC---Cc
Confidence 568999999999543 223456799999999999987432 1 245899999999999999999998421 10
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC---HHHHHH---HHHHhCCeEEeecccc
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAK---AVELLGLRACLVQSTM 171 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~---~~~~~~---~~~~~g~~~~~~~~~~ 171 (466)
....++ + ..++.+||||+++++... ...+.+ +..+.+++.++.....
T Consensus 71 -----------------~~~~~~-~---------~~~l~~G~Ttv~d~g~~~~~~~~~~~~~~~a~~~~gira~l~~~~~ 123 (379)
T PRK12394 71 -----------------EGGVRP-D---------MYMPPNGVTTVVDAGSAGTANFDAFYRTVICASKVRIKAFLTVSPP 123 (379)
T ss_pred -----------------ccccCH-H---------HHHHhCCccEEEECCCCCcccHHHHHHHHhhhhcceeeeEEeeecc
Confidence 001111 1 227899999999987432 212222 3556678887765554
Q ss_pred cCCC-CCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 012333 172 DCGE-GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (466)
Q Consensus 172 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (466)
.... +..... .......++..++++++.... ..+++.+........+++.+.+.++.|+++++++++|+.+...+.
T Consensus 124 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~g~ki~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~ 200 (379)
T PRK12394 124 GQTWSGYQENY--DPDNIDENKIHALFRQYRNVL-QGLKLRVQTEDIAEYGLKPLTETLRIANDLRCPVAVHSTHPVLPM 200 (379)
T ss_pred cccccCccccc--ChhHCCHHHHHHHHHHCcCcE-EEEEEEEecccccccchHHHHHHHHHHHHcCCCEEEEeCCCCccH
Confidence 2211 001000 000111244555555544321 122332222221245688999999999999999999997754321
Q ss_pred HHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC-----------hhhHHHHHhcCCeE-EECccchhhccCCccHHH
Q 012333 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-----------HTEIGLLSRAGVKV-SHCPASAMRMLGFAPIKE 318 (466)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~-----------~~~~~~~~~~g~~~-~~~p~~~~~~~~~~~~~~ 318 (466)
.+..+.+....+..|+.+.+ .+++..+++.|+.+ ..++.++. .......
T Consensus 201 ----------------~~~~~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~s~~---~~~~~~~ 261 (379)
T PRK12394 201 ----------------KELVSLLRRGDIIAHAFHGKGSTILTEEGAVLAEVRQARERGVIFDAANGRSHF---DMNVARR 261 (379)
T ss_pred ----------------HHHHHhcCCCCEEEecCCCCCCCcCCCCCCChHHHHHHHhCCeEEEecCCcccc---chHHHHH
Confidence 12233344445678887733 24667788889876 55655442 2244568
Q ss_pred HHHcCC-cEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccC
Q 012333 319 MLHADI-CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAG 397 (466)
Q Consensus 319 ~~~~gi-~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G 397 (466)
++++|+ ++++|||+.+++...+++..|.. .+.+.. +.+++++++++++|.|||+++|+++++|+|++|
T Consensus 262 ~l~~G~~~~~lgTD~~~~~~~~~~~~~l~~--~~~~~~---------~~~~~~~~~~~~at~~~a~~~g~~~~~G~i~~G 330 (379)
T PRK12394 262 AIANGFLPDIISSDLSTITKLAWPVYSLPW--VLSKYL---------ALGMALEDVINACTHTPAVLMGMAAEIGTLAPG 330 (379)
T ss_pred HHHCCCCceEEECCCCCCCcccCccchHHH--HHHHHH---------HcCCCHHHHHHHHHHHHHHHhCCCCCCCccCCC
Confidence 899995 89999999876543333333322 222211 135999999999999999999996568999999
Q ss_pred CccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECC
Q 012333 398 KKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 445 (466)
Q Consensus 398 ~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g 445 (466)
++|||+++|.+.... +.+|.....++......|..||++|++||++-
T Consensus 331 ~~ADl~~~~~~~~~~-~~~d~~g~~~~~~~~~~v~~t~v~G~~v~~~~ 377 (379)
T PRK12394 331 AFADIAIFKLKNRHV-EFADIHGETLTGTHVLVPQMTIKSGEILYRQI 377 (379)
T ss_pred CccCEEEEecCcCcc-eeccCCCCEEEeeeecceEEEEECCEEEEecC
Confidence 999999999985533 56777777777666678999999999999853
No 38
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=100.00 E-value=4.1e-36 Score=290.89 Aligned_cols=361 Identities=19% Similarity=0.173 Sum_probs=227.1
Q ss_pred eEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccC
Q 012333 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (466)
Q Consensus 20 ~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~ 99 (466)
|++|+|++|+++.+ .....++|.|+||+|++|++... + .+.++||++|++|+|||||+|+|+.....
T Consensus 1 d~~i~n~~v~~~~~--~~~~~~~i~I~~g~I~~i~~~~~-----~-~~~~~iD~~G~~v~PG~iD~H~H~~~~~~----- 67 (415)
T cd01297 1 DLVIRNGTVVDGTG--APPFTADVGIRDGRIAAIGPILS-----T-SAREVIDAAGLVVAPGFIDVHTHYDGQVF----- 67 (415)
T ss_pred CEEEECCEEECCCC--CccccceEEEECCEEEEEecCCC-----C-CCCeEEECCCCEEccCEeeeeecCCcccc-----
Confidence 57999999996433 33456799999999999986432 1 25689999999999999999999843110
Q ss_pred CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-------------------------------
Q 012333 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------------------------------- 148 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~------------------------------- 148 (466)
.. .....++.+||||++++...
T Consensus 68 -------------------~~--------~~~~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (415)
T cd01297 68 -------------------WD--------PDLRPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWG 120 (415)
T ss_pred -------------------cC--------cchhhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCC
Confidence 00 01234679999999885321
Q ss_pred --CHHHHHHHHHHh--CCeEEe--eccccc-CCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccc--c
Q 012333 149 --HVSEMAKAVELL--GLRACL--VQSTMD-CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM--N 219 (466)
Q Consensus 149 --~~~~~~~~~~~~--g~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~ 219 (466)
......+..... .+.... ...... ...|... .......+.+..+++++..+.|...++. ...+.+ .
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~~~~g~~~---~~~~~~~~~~~~~l~~~al~~Ga~g~~~--~~~y~~~~~ 195 (415)
T cd01297 121 WATFAEYLDALEARPPAVNVAALVGHAALRRAVMGLDA---REATEEELAKMRELLREALEAGALGIST--GLAYAPRLY 195 (415)
T ss_pred CCCHHHHHHHHHhcCCCcCeeeccCcHHHHHHHhCcCC---CCCCHHHHHHHHHHHHHHHHCCCeEEEc--ccccCCccc
Confidence 011112222111 122110 000000 0000000 1123345566666666656655444443 222222 5
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh----------hh
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH----------TE 289 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~----------~~ 289 (466)
.+.+++.++++.++++|.++.+|+.+....... .....+...+..+.+..+.|...... +.
T Consensus 196 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~e~~---------av~~~~~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~ 266 (415)
T cd01297 196 AGTAELVALARVAARYGGVYQTHVRYEGDSILE---------ALDELLRLGRETGRPVHISHLKSAGAPNWGKIDRLLAL 266 (415)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEECcccccHHH---------HHHHHHHHHHHhCCCEEEEEEecCCCcccchHHHHHHH
Confidence 788999999999999999999999764311110 12334444445567889999987765 56
Q ss_pred HHHHHhcCCeEE--ECccchhhccCCccHHHHHHcCCcEEEccCCCCCCC-CCCHHHHHHHHHHHhcccccccCCCCCCC
Q 012333 290 IGLLSRAGVKVS--HCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNN-RMSIVDEMYLASLINKGREVFANGTTDPA 366 (466)
Q Consensus 290 ~~~~~~~g~~~~--~~p~~~~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (466)
++++++.|..+. +||+.... ..+++++++. ..++++||+.+... ....+.. ...+..... ....
T Consensus 267 i~~a~~~G~~v~~e~~p~~~~~---~~~~~~l~~~-~~~~i~SDh~~~~~~~~~~~~~--~~~~l~~~~-------~~~~ 333 (415)
T cd01297 267 IEAARAEGLQVTADVYPYGAGS---EDDVRRIMAH-PVVMGGSDGGALGKPHPRSYGD--FTRVLGHYV-------RERK 333 (415)
T ss_pred HHHHHHhCCcEEEEeCCCCCCc---HHHHHHHHcC-CCceeeeCCCcCCCCCcchhCC--HHHHHHHHh-------cccC
Confidence 677777666654 77754321 4567788877 89999999987420 0011111 111111100 0112
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCe
Q 012333 367 ALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 446 (466)
Q Consensus 367 ~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 446 (466)
.+|++++++++|.+||+++|+. ++|+|++|++|||||||++.+...+..+ .+......|..||++|++||++++
T Consensus 334 ~~~~~~~~~~~t~~pA~~~gl~-~~G~l~~G~~ADlvv~d~~~~~~~~~~~-----~~~~~~~~v~~viv~G~~v~~~~~ 407 (415)
T cd01297 334 LLSLEEAVRKMTGLPARVFGLA-DRGRIAPGYRADIVVFDPDTLADRATFT-----RPNQPAEGIEAVLVNGVPVVRDGA 407 (415)
T ss_pred CCCHHHHHHHHHHHHHHHhCCC-CCceeCCCCCCCEEEEcccccccccchh-----hhccCCCCceEEEECCEEEEECCE
Confidence 3999999999999999999996 4699999999999999998654443322 112234679999999999999999
Q ss_pred eeeccHH
Q 012333 447 ILLLMRG 453 (466)
Q Consensus 447 ~~~~~~~ 453 (466)
+++..+|
T Consensus 408 ~~~~~~G 414 (415)
T cd01297 408 FTGARPG 414 (415)
T ss_pred ECCCCCC
Confidence 9876655
No 39
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=100.00 E-value=2.9e-36 Score=289.74 Aligned_cols=350 Identities=22% Similarity=0.289 Sum_probs=229.3
Q ss_pred EEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc-----cCCCCchHhhhhc---cc--
Q 012333 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR---IW-- 112 (466)
Q Consensus 43 v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~-----~~~~~~~~~~~~~---~~-- 112 (466)
|+|+||+|++|++..+.++. ...+.++||++|++|+|||||+|+|++.+..++. ..+..+.+|+... .|
T Consensus 1 i~i~~g~I~~ig~~~~~~~~-~~~~~~~iD~~G~~v~Pg~vn~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (371)
T cd01296 1 IAIRDGRIAAVGPAASLPAP-GPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTV 79 (371)
T ss_pred CEEECCEEEEEeCchhcccc-cCCCceEEECCCCEEecceeecCCCCcCCCCcHHHHHHHHCCCCHHHHHHcCCChHHHH
Confidence 57899999999986432110 0125579999999999999999999987655432 1455677887542 22
Q ss_pred cccCCCChhHHHHHHHHHHHHHHhcCceeeeecC--ccC---HHHHHHHHHHhCCe--EEeecccccCCCCCCcccccCC
Q 012333 113 PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQH---VSEMAKAVELLGLR--ACLVQSTMDCGEGLPASWAVRT 185 (466)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~--~~~---~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~ 185 (466)
.....+++++.+......+..++++|||++.+.. ... .....++..+.+.+ ..+...+.. +..++.... .
T Consensus 80 ~~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~-~~~~p~~~~--~ 156 (371)
T cd01296 80 RATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLG-AHAVPPEYK--G 156 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeee-cccCCcccC--C
Confidence 4445677788888888899999999999998731 111 12234444443332 111111110 111221111 0
Q ss_pred hHHHHH-HHHHHHHHhc-cCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCch
Q 012333 186 TDDCIQ-SQKELYAKHH-HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 263 (466)
Q Consensus 186 ~~~~~~-~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~ 263 (466)
...... ...+.++.+. ......++. .+.. ...+.+.+.++++.|+++|+++.+|+.+..... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~------------~ 221 (371)
T cd01296 157 REEYIDLVIEEVLPAVAEENLADFCDV-FCEK--GAFSLEQSRRILEAAKEAGLPVKIHADELSNIG------------G 221 (371)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCEEEE-eecC--CccCHHHHHHHHHHHHHCCCeEEEEEcCcCCCC------------H
Confidence 011111 1122333322 122233333 2222 234578899999999999999999997643211 1
Q ss_pred HHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCCCCCC-CCH
Q 012333 264 VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR-MSI 341 (466)
Q Consensus 264 ~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~~~-~~~ 341 (466)
.+.....+ ...+.|+.++++++++++++.|+.+++||.+++.. ...++++++++.|+++++|||+.+.... .++
T Consensus 222 ~~~~~~~g----~~~i~H~~~~~~~~i~~la~~g~~v~~~P~~~~~l~~~~~~~~~l~~~Gv~v~lgsD~~p~~~~~~~l 297 (371)
T cd01296 222 AELAAELG----ALSADHLEHTSDEGIAALAEAGTVAVLLPGTAFSLRETYPPARKLIDAGVPVALGTDFNPGSSPTSSM 297 (371)
T ss_pred HHHHHHcC----CCeeHHhcCCCHHHHHHHHHcCCeEEEChHHHHHhCCCCCCHHHHHHCCCcEEEecCCCCCCChHHHH
Confidence 11111222 23478999999999999999999999999988765 4478999999999999999998543211 123
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccc
Q 012333 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITS 421 (466)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~ 421 (466)
+..+..+... .+++++++++++|.|||+++|+++++|+|++|++|||||+|.+++..
T Consensus 298 ~~~~~~~~~~--------------~~l~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~--------- 354 (371)
T cd01296 298 PLVMHLACRL--------------MRMTPEEALTAATINAAAALGLGETVGSLEVGKQADLVILDAPSYEH--------- 354 (371)
T ss_pred HHHHHHHHHh--------------cCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCCcCEEEECCCchHh---------
Confidence 4444433211 24999999999999999999998789999999999999999994322
Q ss_pred eecccCCCCeeEEEEcc
Q 012333 422 LVYCMRTENVVSVMCNG 438 (466)
Q Consensus 422 ~~~~~~~~~v~~v~v~G 438 (466)
+++.....+|..||++|
T Consensus 355 ~~~~~~~~~v~~v~~~G 371 (371)
T cd01296 355 LAYRFGVNLVEYVIKNG 371 (371)
T ss_pred hhhhcCCCCceEEEeCc
Confidence 22223346799999998
No 40
>PRK05985 cytosine deaminase; Provisional
Probab=100.00 E-value=2.4e-35 Score=284.23 Aligned_cols=369 Identities=17% Similarity=0.174 Sum_probs=235.8
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
|.+++|+|++|+++ . ..+|.|++|+|++|++.... + ++.++||++|++|+|||||+|+|+........
T Consensus 1 ~~~~~i~~~~i~~~--~-----~~~v~i~~g~i~~i~~~~~~----~-~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~~~ 68 (391)
T PRK05985 1 MTDLLFRNVRPAGG--A-----AVDILIRDGRIAAIGPALAA----P-PGAEVEDGGGALALPGLVDGHIHLDKTFWGDP 68 (391)
T ss_pred CCCEEEECcEECCC--C-----eeEEEEECCEEEEecCCCCC----C-CCCcEEECCCCEEecceEeeEEccCccccCCc
Confidence 46789999999953 1 34999999999999986432 1 25579999999999999999999975433221
Q ss_pred c----CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-------cCHHHHHHHHHHhCCeEEe
Q 012333 98 A----DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-------QHVSEMAKAVELLGLRACL 166 (466)
Q Consensus 98 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-------~~~~~~~~~~~~~g~~~~~ 166 (466)
. ....+.+++....- ...++..+.+..+...+.+++++|+|+++++-. .......++.....-+.
T Consensus 69 ~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 144 (391)
T PRK05985 69 WYPNEPGPSLRERIANERR--RRAASGHPAAERALALARAAAAAGTTAMRSHVDVDPDAGLRHLEAVLAARETLRGLI-- 144 (391)
T ss_pred cccCCCCCCHHHHHHHHHH--hhccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCcccchHHHHHHHHHHhhCcc--
Confidence 1 12223333321100 123445566777778889999999999977431 11334444433321111
Q ss_pred ecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCC
Q 012333 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (466)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 246 (466)
...... ++......... ..+.+++..+.+.+ +...+.++.....+++.+.+++++|+++|+++++|+.+.
T Consensus 145 ~~~~v~----~~~~g~~~~~~-----~~~ll~~~l~~g~~-~~gg~~p~~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~ 214 (391)
T PRK05985 145 DIQIVA----FPQSGVLSRPG-----TAELLDAALRAGAD-VVGGLDPAGIDGDPEGQLDIVFGLAERHGVGIDIHLHEP 214 (391)
T ss_pred cEEEEe----ccCccccCCcC-----HHHHHHHHHHcCCC-EEeCCCCCCcCCCHHHHHHHHHHHHHHhCCCcEEeeCCC
Confidence 111111 11110000000 11333433333322 333344556677788999999999999999999999876
Q ss_pred cchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC---h----hhHHHHHhcCCeEEECccchhhccCCccHHHH
Q 012333 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---H----TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEM 319 (466)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~---~----~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~ 319 (466)
......... ...+.....+. ..+..+.|+..++ + +.++++++.|+.+++|+... .+.++++++
T Consensus 215 ~d~~~~~~~------~~~e~~~~~g~-~~~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~~~~~---~~~~~~~~l 284 (391)
T PRK05985 215 GELGAFQLE------RIAARTRALGM-QGRVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTNAPGS---VPVPPVAAL 284 (391)
T ss_pred CCccHHHHH------HHHHHHHHhCC-CCCEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEeCCCC---CCCCCHHHH
Confidence 543211111 01222223332 2357899988763 3 45789999999999886543 677899999
Q ss_pred HHcCCcEEEccCCCCC----CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccc
Q 012333 320 LHADICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 395 (466)
Q Consensus 320 ~~~gi~~~~gsD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~ 395 (466)
++.|+++++|||+... ....+++..++.+....+.. . .-++.++|+++|.++|+++|+++ ++|+
T Consensus 285 ~~~Gv~v~lGtD~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~al~~~T~~~A~~lg~~~--~~l~ 352 (391)
T PRK05985 285 RAAGVTVFGGNDGIRDTWWPYGNGDMLERAMLIGYRSGFR--------T--DDELAAALDCVTHGGARALGLED--YGLA 352 (391)
T ss_pred HHCCCeEEEecCCCCCCCcCCCCCcHHHHHHHHHHHHccC--------C--hHHHHHHHHHHcchhHHHhCCcc--cCCC
Confidence 9999999999998521 12357787776554433211 0 12468999999999999999964 4599
Q ss_pred cCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECC
Q 012333 396 AGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 445 (466)
Q Consensus 396 ~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g 445 (466)
+||.||||++|.+.+...+. ....+..||++|++||++|
T Consensus 353 ~G~~ADlvvld~~~~~~~~~-----------~~~~~~~v~~~G~~v~~~~ 391 (391)
T PRK05985 353 VGARADFVLVDAETVAEAVV-----------AVPVRRLVVRGGRIVARDG 391 (391)
T ss_pred CCCcCCEEEECCCCHHHHHh-----------hCCcceEEEECCEEEecCC
Confidence 99999999999984321111 1245678999999999985
No 41
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.7e-35 Score=279.70 Aligned_cols=372 Identities=20% Similarity=0.238 Sum_probs=228.9
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCc-hhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSA-DILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~-~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
..+++.+++.++. ...++++.|+|+||||++|++.. +. | ++.++||++|++|+|||||+|+|+....-++.
T Consensus 10 ~~~~~~~~~~~~~---~~~i~~~~v~i~~GkI~~vg~~~~~~----~-~~~~viD~~G~~V~PGLID~HtHl~~~~~~~~ 81 (406)
T COG1228 10 AMLATLAGRGLPG---LGIIEDGAVLIEDGKIVAVGPEEIDI----P-AGAEVIDAKGKTVTPGLIDAHTHLGFGGSRGG 81 (406)
T ss_pred hhheeeccccCCC---cceeecceEEEECCEEEEecCcccCC----C-CCCeEEeCCCCEEccceeeccccccccCCccc
Confidence 4577888888753 34456699999999999999873 22 2 36799999999999999999999976443332
Q ss_pred cC-----CCCchHhhhhccccccCC---C---ChhHHHHHHHHHHHHHHhcCceeeeecCccCHHH-----HHHHHHHhC
Q 012333 98 AD-----DVDLMTWLHDRIWPYESN---M---TEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSE-----MAKAVELLG 161 (466)
Q Consensus 98 ~~-----~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~-----~~~~~~~~g 161 (466)
.. ..++.+. ....+..... . .+..........+..++.+|+|+.....+..+.. ..+......
T Consensus 82 ~~~~~~~~~~~~~i-~~~~~gi~~~~~~~~~a~~~g~~~~~~~~l~~~~~~g~~~~e~~~~~g~~~~~e~~~~~~~~~~~ 160 (406)
T COG1228 82 EFELREAGASYTEI-LAAGGGILPLDRGFTTARDGGLKATALPRLKRAGSAGVTTGERKSGYGLDLETEGGHLRAAAGLK 160 (406)
T ss_pred hhhhcccCccHHHH-HHhcCChhhhHHHHHHHhhcchHHHHHHHHHHHHHcCCcccceeeeecccccccccccchhhhcc
Confidence 11 1112111 1111111111 1 1111222344456778889998875543322211 111111111
Q ss_pred --CeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCcc
Q 012333 162 --LRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239 (466)
Q Consensus 162 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v 239 (466)
.......... ...+.+.... .......+.....++.....+ ..+..-........+++++.++++.+++.++++
T Consensus 161 ~~~~~~~~~t~~-~~~~~~~~~~-~~r~~~~~g~~~~i~~~a~~~--l~~~~d~~~~~~~fs~~e~~~~l~~a~~~g~~v 236 (406)
T COG1228 161 ESRPVAVGSTPL-AAHGVPEERK-ATREAYVAGARLLIKIVATGG--LASFVDAFCEGGQFSPEEIRAVLAAALKAGIPV 236 (406)
T ss_pred ccccccccCccc-cccCCccccc-chHHHHHHHHHHHHHHHHhcc--ccchhhccccccccCHHHHHHHHHHHHHCCCce
Confidence 0011111111 1112222221 122222222222233332211 111101123345678888999999999999999
Q ss_pred ceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHh--cCCe-EEECccchhhc--cCCc
Q 012333 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR--AGVK-VSHCPASAMRM--LGFA 314 (466)
Q Consensus 240 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~--~g~~-~~~~p~~~~~~--~~~~ 314 (466)
.+|+....... .+ -.++ ...+.|+.+++.+..+.+++ .|+. .++.|...... ....
T Consensus 237 ~~HA~~~~g~~--------------~A-~~~g----~~s~~H~~~ld~~~~~~~a~~~~g~~~~~l~p~~~~~l~e~~~~ 297 (406)
T COG1228 237 KAHAHGADGIK--------------LA-IRLG----AKSAEHGTLLDHETAALLAEKGAGTPVPVLLPRTKFELRELDYK 297 (406)
T ss_pred EEEecccchHH--------------HH-HHhC----cceehhhhhcCHhHHHHHhhccCCCccccccchhhhhhhcccch
Confidence 99997754111 11 1111 12477999999999999999 7762 45555544433 5567
Q ss_pred cHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCccccc
Q 012333 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 394 (466)
Q Consensus 315 ~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i 394 (466)
+++.+++.|++++++||+++..+..++...|..+.. .+||++|||+++|.|||++||+.++.|+|
T Consensus 298 ~~~~l~~~GV~vai~TD~~~~~~~~~l~~~m~l~~~---------------~gmtp~EaL~a~T~naA~alG~~~~~Gsl 362 (406)
T COG1228 298 PARKLIDAGVKVAIGTDHNPGTSHGSLALEMALAVR---------------LGMTPEEALKAATINAAKALGLADKVGSL 362 (406)
T ss_pred hHHHHHHCCCEEEEEcCCCCCchhhHHHHHHHHHHH---------------cCCCHHHHHHHHHHHHHHHcCCccccccc
Confidence 899999999999999999887532233344443322 14999999999999999999999999999
Q ss_pred ccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCe
Q 012333 395 EAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 446 (466)
Q Consensus 395 ~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 446 (466)
++||+|||||||.+ |..+ +.|.....++..||++|+++++.+.
T Consensus 363 e~Gk~ADlvv~~~d-----p~~~----i~y~~~~~~v~~v~k~G~~~~~~~~ 405 (406)
T COG1228 363 EPGKDADLVVWDGD-----PLAD----IPYFLGLNKVEAVIKDGKVVYERGS 405 (406)
T ss_pred cCCCccCEEEEcCC-----Chhh----ccccccCCceEEEEECCEEeecCCC
Confidence 99999999999999 3333 2333345799999999999998653
No 42
>PRK07583 cytosine deaminase-like protein; Validated
Probab=100.00 E-value=3.2e-33 Score=272.36 Aligned_cols=379 Identities=17% Similarity=0.152 Sum_probs=235.0
Q ss_pred cccceEEEEccEEEeecCCc--------ceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeeccccccc
Q 012333 16 GSSSTMILHNAVIVTMDKES--------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d~~~--------~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~ 87 (466)
.+...++|+|+++-+..... .-....+|.|+||||++|++.... + .+.++||++|++|+|||||+|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~----~-~~~~~id~~g~~v~Pg~id~H~ 82 (438)
T PRK07583 8 PESGRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGA----P-DELPAVDLKGRMVWPCFVDMHT 82 (438)
T ss_pred CCCCcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCC----C-CCCceecCCCCcccCCccccee
Confidence 34567899999864422111 122456999999999999986431 1 2668999999999999999999
Q ss_pred CCcccccccc--cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeee---c-Cc---cCHHHHHHHHH
Q 012333 88 HTSQQLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE---A-GG---QHVSEMAKAVE 158 (466)
Q Consensus 88 H~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~---~-~~---~~~~~~~~~~~ 158 (466)
|+........ .....+.+.+..........++..+...........++..|+|+++. . .. .....+.+...
T Consensus 83 Hld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd~~~~~~~~~~~~i~~~~~ 162 (438)
T PRK07583 83 HLDKGHIWPRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHLDSFAPQAAISWEVFAELRE 162 (438)
T ss_pred ccccceecCCCCCCCCCHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeeeccCCCCcccHHHHHHHHHH
Confidence 9987654432 12222434432221111223344555555667788899999995544 2 11 11222223333
Q ss_pred HhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCc
Q 012333 159 LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG 238 (466)
Q Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 238 (466)
...-+............+.. . . .. .+..+.+.+ .+ +.+.. ........++.+.+++++|+++|++
T Consensus 163 ~~~~~~~~~~v~~~p~~~~~----~-~--~~-~eL~~~v~~---~~-gv~g~---~~~~~~~~d~~l~~i~~lA~~~G~~ 227 (438)
T PRK07583 163 AWAGRIALQAVSLVPLDAYL----T-D--AG-ERLADLVAE---AG-GLLGG---VTYMNPDLDAQLDRLFRLARERGLD 227 (438)
T ss_pred HhhccCeEEEEEecChhhcc----C-c--hH-HHHHHHHHH---cC-CEEeC---CCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 22111111111100000111 0 1 11 222222222 11 22211 1111122567899999999999999
Q ss_pred cceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC-------hhhHHHHHhcCCeEEECccchhhc-
Q 012333 239 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-------HTEIGLLSRAGVKVSHCPASAMRM- 310 (466)
Q Consensus 239 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~-------~~~~~~~~~~g~~~~~~p~~~~~~- 310 (466)
+.+|+.+........... ..+.....+. ..+.++.|+..++ .+.++++++.|+.+++||.+++..
T Consensus 228 v~vH~~E~~~~~~~~l~~------~~~~~~~~G~-~~~v~i~H~~~l~~~~~~~~~~~i~~la~~gv~vv~~P~~~~~l~ 300 (438)
T PRK07583 228 LDLHVDETGDPASRTLKA------VAEAALRNGF-EGKVTCGHCCSLAVQPEEQAQATIALVAEAGIAIVSLPMCNLYLQ 300 (438)
T ss_pred cEEeECCCCCchHHHHHH------HHHHHHHhCC-CCCEEEEeccchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhc
Confidence 999997765433221110 1222223333 3468899999887 477999999999999999987643
Q ss_pred ----------cCCccHHHHHHcCCcEEEccCCCC--CC--CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 012333 311 ----------LGFAPIKEMLHADICVSLGTDGAP--SN--NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (466)
Q Consensus 311 ----------~~~~~~~~~~~~gi~~~~gsD~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 376 (466)
.+..+++++++.|+++++|||+.. .. ...++++.+..+....+. +.++.+++++
T Consensus 301 ~~~~~~~p~~~~~~~v~~l~~aGV~valGtD~~~d~~~p~g~~~~~~~~~~a~~~~~~------------~~~~~~al~~ 368 (438)
T PRK07583 301 DRQPGRTPRWRGVTLVHELKAAGIPVAVASDNCRDPFYAYGDHDMLEVFREAVRILHL------------DHPYDDWPAA 368 (438)
T ss_pred CCCcCCCCCCCCcchHHHHHHCCCeEEEEeCCCCCCCCCCCCcCHHHHHHHHHHHHhc------------CCcHHHHHHH
Confidence 245689999999999999999842 11 235677777665433211 2689999999
Q ss_pred HhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECC
Q 012333 377 ATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 445 (466)
Q Consensus 377 ~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g 445 (466)
+|.+||+++|+++ +|+|++|+.|||||+|.+ +..+... +...++.||++|++|+...
T Consensus 369 ~T~~~A~~lg~~~-~G~i~~G~~ADlvv~d~~-----~~~~~~~------~~~~~~~V~~~G~~v~~~~ 425 (438)
T PRK07583 369 VTTTPADIMGLPD-LGRIAVGAPADLVLFKAR-----SFSELLS------RPQSDRIVLRAGKPIDTTL 425 (438)
T ss_pred HhHHHHHHcCCCC-CCCcCCCCCCCEEEEcCC-----CHHHHHh------cCCCccEEEECCEEecccC
Confidence 9999999999975 899999999999999999 3333211 1256888999999887653
No 43
>PLN02795 allantoinase
Probab=100.00 E-value=9.5e-34 Score=278.47 Aligned_cols=383 Identities=16% Similarity=0.140 Sum_probs=221.8
Q ss_pred cccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccc
Q 012333 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~ 95 (466)
.++.|++|+|++|++.++ . ..++|+|+||+|++|++....+.. .++.++||++|++|+|||||+|+|+...
T Consensus 41 ~~~~~~vi~~~~vv~~~~---~-~~~~v~i~dG~I~~I~~~~~~~~~--~~~~~~ida~G~~v~PG~ID~H~H~~~~--- 111 (505)
T PLN02795 41 LPWPHFVLYSKRVVTPAG---V-IPGAVEVEGGRIVSVTKEEEAPKS--QKKPHVLDYGNAVVMPGLIDVHVHLNEP--- 111 (505)
T ss_pred ccccceEEECCEEEECCC---e-EEEEEEEECCEEEEecCccccccc--cCCCEEEECCCCEEecCEEecccCcCCC---
Confidence 345899999999997432 2 357999999999999874321100 0246899999999999999999998320
Q ss_pred cccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-cC----HHHHHHHHHHhCCeEEeeccc
Q 012333 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QH----VSEMAKAVELLGLRACLVQST 170 (466)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-~~----~~~~~~~~~~~g~~~~~~~~~ 170 (466)
. ... ........+.++.+||||+.+|+. .. .....+...+. .....+
T Consensus 112 --------------------~-~~~---~e~~~~~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~----~~~~~~ 163 (505)
T PLN02795 112 --------------------G-RTE---WEGFPTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEA----AKGKLY 163 (505)
T ss_pred --------------------C-ccc---hhHHHHHHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHH----hccCce
Confidence 0 000 112233456688899999999972 11 11212211111 111111
Q ss_pred ccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccc---cCCHHHHHHHHHHHHHcCCccceeccCCc
Q 012333 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM---NATDRLLLETRDMAREFKTGIHMHVAEIP 247 (466)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 247 (466)
.+.+ +..... ...... .+.+.++.+.+...+++++.+++.+ ..+++.+.++++.++++|.++++|+.+..
T Consensus 164 vd~~--~~~~~~-~~~~~~----~~~l~~~~~~G~~g~k~f~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~ 236 (505)
T PLN02795 164 VDVG--FWGGLV-PENAHN----ASVLEELLDAGALGLKSFMCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVS 236 (505)
T ss_pred eeee--ceeccc-CcchhH----HHHHHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecCChh
Confidence 1111 111000 001111 2223333333443467666554433 46788999999999999999999997754
Q ss_pred chhHHHHhhcC--------CCCc-------hHHHHhhhccC-------CCCeeEEEeecC--ChhhHHHHHhcC--CeEE
Q 012333 248 YENQVVMDTRK--------VDHG-------TVTFLDKIEFL-------QNNLLSAHTVWV--NHTEIGLLSRAG--VKVS 301 (466)
Q Consensus 248 ~~~~~~~~~~~--------~~~~-------~~~~~~~~~~~-------~~~~~~~H~~~~--~~~~~~~~~~~g--~~~~ 301 (466)
..........+ .... ....+...... +.+..+.|.... +-+.++.+++.| +.+.
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~rP~~aE~~ai~~~~~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~E 316 (505)
T PLN02795 237 PVESDSRLDADPRSYSTYLKSRPPSWEQEAIRQLLEVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVE 316 (505)
T ss_pred HhhhhhhhhcCCcChhHhcccCCHHHHHHHHHHHHHHHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEE
Confidence 21100000000 0000 01112222222 445555555432 123455566667 5566
Q ss_pred ECccchhhc--------------------cCCccHHHHHHcCCcEEEccCCCCCCCCCC------HHHH--------HHH
Q 012333 302 HCPASAMRM--------------------LGFAPIKEMLHADICVSLGTDGAPSNNRMS------IVDE--------MYL 347 (466)
Q Consensus 302 ~~p~~~~~~--------------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~------~~~~--------~~~ 347 (466)
+||+.-..- .....+++.+..|...+++|||.|+....+ ++.. ...
T Consensus 317 v~ph~L~l~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l 396 (505)
T PLN02795 317 TCPHYLAFSAEEIPDGDTRYKCAPPIRDAANRELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVL 396 (505)
T ss_pred eChhhhcccHHHccCCCCceEEcCCCCChHHHHHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhCCCCceeHHHHH
Confidence 788643200 112345567889999999999998752211 1110 111
Q ss_pred HHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCCc---------CC
Q 012333 348 ASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVPV---------HD 417 (466)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~~---------~~ 417 (466)
..+.... ...++|++++++++|.|||+++|+ +++|.|++|++|||||+|.+ .|+..+. .+
T Consensus 397 ~~~~~~~---------~~~~l~l~~~v~~~s~~pA~~~gl-~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~~s~~~~~s 466 (505)
T PLN02795 397 PATWTAG---------RAYGLTLEQLARWWSERPAKLAGL-DSKGAIAPGKDADIVVWDPEAEFVLDESYPIYHKHKSLS 466 (505)
T ss_pred HHHHHHH---------HHcCCCHHHHHHHHHHHHHHHhCC-CCCCccCCCCccCEEEEcCCcceEECcchhhhhcCCCcC
Confidence 1111110 123599999999999999999999 56899999999999999987 3322211 12
Q ss_pred cccceecccCCCCeeEEEEccEEEEECCeeeeccHHHH
Q 012333 418 RITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRL 455 (466)
Q Consensus 418 ~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~ 455 (466)
|+... .-..+|..|+++|++||++|+++....|++
T Consensus 467 p~~G~---~l~g~v~~tiv~G~~v~~~g~~~~~~~G~~ 501 (505)
T PLN02795 467 PYLGT---KLSGKVIATFVRGNLVFLEGKHAKQACGSP 501 (505)
T ss_pred CCCCe---EEEeEEEEEEECCEEEEECCeEcCCCCCeE
Confidence 22222 113579999999999999999864444543
No 44
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=6.6e-33 Score=267.60 Aligned_cols=340 Identities=17% Similarity=0.184 Sum_probs=205.4
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhh--h-----hhccCCCeEEeCCCcEEeecccccccCCc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--Q-----QFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~--~-----~~~~~~~~~iD~~G~~v~PG~ID~H~H~~ 90 (466)
..|++|+|++|+++. .. +..++|.|+||+|++|++..... . ...+.++++||++|++|+|||||+|+|+.
T Consensus 67 ~~DlVI~Ng~ViD~~--~g-i~kaDI~IkdGrI~aIG~~~~p~~~~~v~~~~~~g~~tevIDa~G~iVtPG~ID~HvH~~ 143 (572)
T PRK13309 67 VLDLVITNVTIVDAR--LG-VIKADVGIRDGKIVGIGKSGNPSTMDGVTQGMVVGVSTDAISGEHLILTAAGIDTHIHLI 143 (572)
T ss_pred cCCEEEECeEEEcCC--CC-EEEEEEEEECCEEEEecCCCccccccccccccccCCCceEEECCCCEEEeCEEEeecccC
Confidence 679999999999532 22 35689999999999999754210 0 01112478999999999999999999972
Q ss_pred ccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc------------c---CHHHHHH
Q 012333 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG------------Q---HVSEMAK 155 (466)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~------------~---~~~~~~~ 155 (466)
. +.. .+.++.+||||++.+|. . .+..+.+
T Consensus 144 ~----------------------------P~~--------~~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~ 187 (572)
T PRK13309 144 S----------------------------PQQ--------AYHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLR 187 (572)
T ss_pred C----------------------------cch--------HHHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHH
Confidence 1 111 13488999999996431 1 1223333
Q ss_pred HHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHc
Q 012333 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (466)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~ 235 (466)
..+...+...+.. .+.. .. ..+ +.+..+.+... +..+..+..+++.+.++++.++++
T Consensus 188 ~a~~~pvn~g~~g------kg~~------~~---~~~----l~el~~aGa~g----fk~~~d~g~t~~~L~~aLe~A~~~ 244 (572)
T PRK13309 188 SIEGLPVNVGILG------KGNS------YG---RGP----LLEQAIAGVAG----YKVHEDWGATAAALRHALRVADEV 244 (572)
T ss_pred HhccCCcCEEEEc------CCCC------CC---HHH----HHHHHhcCcEE----EEecCcCCcCHHHHHHHHHHHHhc
Confidence 3333333221111 1110 00 111 11222222222 223333446888999999999999
Q ss_pred CCccceeccCCcc--hhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCe--------------
Q 012333 236 KTGIHMHVAEIPY--ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK-------------- 299 (466)
Q Consensus 236 ~~~v~~H~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~-------------- 299 (466)
+.++.+|+..... ..+.... .++.++++.++..+..+.+ .++.++.....++.
T Consensus 245 gv~VaiH~d~lnE~g~vE~~~a--a~~grpih~~H~~Gagggh---------apd~~~~~~~~~~~~~st~pt~p~~~~~ 313 (572)
T PRK13309 245 DIQVAVHTDSLNECGYVEDTID--AFEGRTIHTFHTEGAGGGH---------APDIIKVASQTNVLPSSTNPTLPYGVNS 313 (572)
T ss_pred CCEEEEeCCccccchhHHHHHH--HhCCCceeeeeccCcccCC---------chhHHHhcCCCCcccCCCCCCCCCcccc
Confidence 9999999754322 1111111 1112233333332222110 01111111111111
Q ss_pred -------EEECcc-------------chhhccCCccHHHHHHcCCcEEEccCCCCCCC-CCCHHHHHHHHHHHhcccccc
Q 012333 300 -------VSHCPA-------------SAMRMLGFAPIKEMLHADICVSLGTDGAPSNN-RMSIVDEMYLASLINKGREVF 358 (466)
Q Consensus 300 -------~~~~p~-------------~~~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 358 (466)
+.+|.. +..+....++++.+++.|+.+++|||++..+. ..+++..++.+..+...+...
T Consensus 314 ~~e~~~m~m~~h~l~~~~~~D~~~a~srig~e~~~a~~~l~daGa~~~~gSD~pv~gr~~~~p~~~iq~Av~rk~~~g~l 393 (572)
T PRK13309 314 QAELFDMIMVCHNLNPNVPADVAFAESRVRPETIAAENVLHDMGVISMFSSDSQAMGRVGENWLRAIQTADAMKAARGKL 393 (572)
T ss_pred hHhhhchhhhhccCCCCCCCChhHHHHhhCchhhcchhHHHhCCCEEEEcCCCCcccCCcccHHHHHHHHHHHHhccCCC
Confidence 111111 00122456889999999999999999985322 457788888777654322221
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEcc
Q 012333 359 ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNG 438 (466)
Q Consensus 359 ~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G 438 (466)
.......+.+++.++|+++|.|||+++|+++++|+|++||.||||||+++.|. .++..||++|
T Consensus 394 ~~~~~~~~~~~v~~aL~~yT~n~A~a~g~e~~~GsLe~Gk~ADlvvld~d~f~-----------------~~~~~vi~~G 456 (572)
T PRK13309 394 PEDAAGNDNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMADLVLWEPRFFG-----------------AKPKMVIKGG 456 (572)
T ss_pred CccCCCcccccHHHHHHHHhHHHHHHcCcccCccccCCCCcCCEEEEchhhcC-----------------CCccEEEECC
Confidence 11111235699999999999999999999999999999999999999998442 4678999999
Q ss_pred EEEEEC-Cee
Q 012333 439 QWVMKN-KKI 447 (466)
Q Consensus 439 ~~v~~~-g~~ 447 (466)
++||.. |..
T Consensus 457 ~iv~~~~gd~ 466 (572)
T PRK13309 457 MINWAAMGDP 466 (572)
T ss_pred EEEEecCCCc
Confidence 999987 543
No 45
>PRK13404 dihydropyrimidinase; Provisional
Probab=100.00 E-value=1.4e-33 Score=276.43 Aligned_cols=383 Identities=16% Similarity=0.189 Sum_probs=225.4
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
++|++|+|++|+++++ . ..++|+|+||+|++|++.. + .+.++||++|++|+|||||+|+|+......
T Consensus 3 ~~d~~i~~~~v~~~~~---~-~~~~i~I~dg~I~~i~~~~------~-~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~-- 69 (477)
T PRK13404 3 AFDLVIRGGTVVTATD---T-FQADIGIRGGRIAALGEGL------G-PGAREIDATGRLVLPGGVDSHCHIDQPSGD-- 69 (477)
T ss_pred CCcEEEECCEEEcCCC---c-eEEEEEEECCEEEEecCCC------C-CCCeEEECCCCEEecCEEEeEEcCCccccC--
Confidence 4688999999996432 2 3579999999999998642 1 356899999999999999999998431100
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc----CHHHHHHHHH-HhCCeEEeeccccc
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVE-LLGLRACLVQSTMD 172 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~----~~~~~~~~~~-~~g~~~~~~~~~~~ 172 (466)
.....+ ......+.++.+|||++++++.. ......+... ...-+........
T Consensus 70 ------------------~~~~~e----~~~~~s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~- 126 (477)
T PRK13404 70 ------------------GIMMAD----DFYTGTVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAVIDYAFH- 126 (477)
T ss_pred ------------------Cccccc----hHHHHHHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcEEEEEEE-
Confidence 000111 12234456789999999997632 1222222221 1111111111000
Q ss_pred CCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHH
Q 012333 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 252 (466)
. +... .... ...+.++.+.+.+...++++..... ...+++.+.++++.++++|.++.+|+.+.......
T Consensus 127 ~--~~~~-----~~~~---~~~~~v~~l~~~G~~~iKi~~~~~~-~~~~~~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~ 195 (477)
T PRK13404 127 L--IVAD-----PTEE---VLTEELPALIAQGYTSFKVFMTYDD-LKLDDRQILDVLAVARRHGAMVMVHAENHDMIAWL 195 (477)
T ss_pred E--EecC-----CChh---hHHHHHHHHHHcCCCEEEEEecCCC-CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence 0 0000 0111 1112234444555667777653222 35677889999999999999999999764432100
Q ss_pred HHh--hcC--------CCCc-------hHHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCe--EEECccchhhc--
Q 012333 253 VMD--TRK--------VDHG-------TVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCPASAMRM-- 310 (466)
Q Consensus 253 ~~~--~~~--------~~~~-------~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~--~~~~p~~~~~~-- 310 (466)
... ..+ .... ....+......+.+..+.|...- +-+.++.+++.|.. +.+||+....-
T Consensus 196 ~~~~~~~G~~~~~~~~~~rp~~~E~~~v~~~~~la~~~g~~~hi~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~ 275 (477)
T PRK13404 196 TKRLLAAGLTAPKYHAISRPMLAEREATHRAIALAELVDVPILIVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAE 275 (477)
T ss_pred HHHHHHCCCcchhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCHH
Confidence 000 000 0000 01122222234445555555431 12455666666754 45777643200
Q ss_pred ---------------------cCCccHHHHHHcCCcEEEccCCCCCCCCC-----------CHH--------HHHHHHHH
Q 012333 311 ---------------------LGFAPIKEMLHADICVSLGTDGAPSNNRM-----------SIV--------DEMYLASL 350 (466)
Q Consensus 311 ---------------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~-----------~~~--------~~~~~~~~ 350 (466)
.....+++.+..|...+++|||.|+.... +++ -++....+
T Consensus 276 ~~~~~~~~g~~~k~~Pplr~~~d~~aL~~~l~~G~id~i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~l 355 (477)
T PRK13404 276 DLDRPGMEGAKYICSPPPRDKANQEAIWNGLADGTFEVFSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLL 355 (477)
T ss_pred HhcCccccCCceEECCCCCChHHHHHHHHHHhCCCceEEecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHH
Confidence 11235567889999999999999874210 111 11222222
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCC-CCCC-------CcCCcccce
Q 012333 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS-WPMV-------PVHDRITSL 422 (466)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~-~~~~-------~~~~~~~~~ 422 (466)
+++.. ....+|++++++++|.+||+++|+.+++|+|++|++||||++|.+. ++.. +..+|+..+
T Consensus 356 l~~~v--------~~~~ls~~~~~~~~t~~pA~~lgl~~~~G~i~~G~~ADlvivd~~~~~~v~~~~~~~~~~~sp~~g~ 427 (477)
T PRK13404 356 FSEGV--------VKGRISLNRFVALTSTNPAKLYGLYPRKGAIAIGADADIAIWDPDREVTITNADLHHAADYTPYEGM 427 (477)
T ss_pred HHHHH--------HcCCCCHHHHHHHHHHHHHHHhCCCCCCceecCCCcCCEEEEcCCccEEEchHHhcccCCCCcccce
Confidence 22211 1224999999999999999999997678999999999999999983 2211 122343333
Q ss_pred ecccCCCCeeEEEEccEEEEECCeeeec-cHHHHHHH
Q 012333 423 VYCMRTENVVSVMCNGQWVMKNKKILLL-MRGRLFQL 458 (466)
Q Consensus 423 ~~~~~~~~v~~v~v~G~~v~~~g~~~~~-~~~~~~~~ 458 (466)
.+ ..+|..||++|++||++|+++.. ..|+++++
T Consensus 428 ~~---~g~v~~tiv~G~vv~~~g~~~~~~~~G~~~~~ 461 (477)
T PRK13404 428 RV---TGWPVTVLSRGRVVVEDGELVAERGSGQFLAR 461 (477)
T ss_pred EE---eeeEEEEEECCEEEEECCEEecCCCceeEecC
Confidence 22 25788999999999999998743 35777654
No 46
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=100.00 E-value=9.1e-33 Score=270.09 Aligned_cols=372 Identities=17% Similarity=0.192 Sum_probs=214.3
Q ss_pred eEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccC
Q 012333 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (466)
Q Consensus 20 ~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~ 99 (466)
|++|+|++|+++++ ...++|.|+||+|++|++... + .+.++||++|++|+|||||+|+|+....
T Consensus 1 dl~i~~~~v~~~~~----~~~~~v~i~dg~I~~i~~~~~-----~-~~~~~id~~g~~v~PG~ID~H~H~~~~~------ 64 (443)
T TIGR03178 1 DLIIRGGRVILPNG----EREADVGVKGGKIAAIGPDIL-----G-PAAKIIDAGGLVVFPGVVDTHVHINEPG------ 64 (443)
T ss_pred CEEEECcEEECCCC----ceEEEEEEECCEEEEeeCCCC-----C-CCCeEEECCCCEEeccEeccccccCCCC------
Confidence 68999999997543 245799999999999987421 1 3568999999999999999999984210
Q ss_pred CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecC-cc--C---HHHHHHHHHHhCCeEEeecccccC
Q 012333 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ--H---VSEMAKAVELLGLRACLVQSTMDC 173 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~-~~--~---~~~~~~~~~~~g~~~~~~~~~~~~ 173 (466)
....+ ......+.++++|||++.+++ .. . ...+....+............. .
T Consensus 65 ------------------~~~~~---~~~~~~~~~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~-~ 122 (443)
T TIGR03178 65 ------------------RTEWE---GFETGTRAAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFW-G 122 (443)
T ss_pred ------------------ccccc---hHHHHHHHHHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCceeEEEE-e
Confidence 00001 122234568999999999986 21 1 1111111111111111111111 0
Q ss_pred CCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecc---cccCCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 012333 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (466)
+... .. .+.+..+.+.+...++++++..+ ....+.+.+.++++.++++|.++.+|+.+.....
T Consensus 123 --~~~~--------~~----~~~i~~~~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~E~~~~~~ 188 (443)
T TIGR03178 123 --GLVP--------YN----LDDLRELDEAGVVGFKAFLSPSGDDEFPHVDDWQLYKGMRELARLGQLLLVHAENPAITS 188 (443)
T ss_pred --ccCC--------CC----HHHHHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCeEEEeccChHHHH
Confidence 0110 11 11233344444456666655432 2356788899999999999999999975432211
Q ss_pred HHHH--hhcC-------C-CCc-------hHHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCeEE--ECccchh--
Q 012333 251 QVVM--DTRK-------V-DHG-------TVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKVS--HCPASAM-- 308 (466)
Q Consensus 251 ~~~~--~~~~-------~-~~~-------~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~~~--~~p~~~~-- 308 (466)
.... ...+ . ... ....+...+..+.+..+.|...- +-+.++.+++.|+.+. +||+...
T Consensus 189 ~~~~~~~~~g~~~~~~~~~~~p~~ae~~~~~~~~~la~~~g~~vhi~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l~l~ 268 (443)
T TIGR03178 189 ALGEEAPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVTGCRVHVVHLSSAEAVELITEAKQEGLDVTVETCPHYLTLT 268 (443)
T ss_pred HHHHHHHhcCCCChhHhcCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEECccceEec
Confidence 1100 0000 0 000 11122222223334444444321 1244556666675544 4776421
Q ss_pred ----hc--------------cCCccHHHHHHcCCcEEEccCCCCCCCC----CCHHHH--------HHHHHHHhcccccc
Q 012333 309 ----RM--------------LGFAPIKEMLHADICVSLGTDGAPSNNR----MSIVDE--------MYLASLINKGREVF 358 (466)
Q Consensus 309 ----~~--------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~----~~~~~~--------~~~~~~~~~~~~~~ 358 (466)
.. .....+++.++.|...+++|||.|.... .+++.. ..........
T Consensus 269 ~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~SDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~---- 344 (443)
T TIGR03178 269 AEEVPDGGTLAKCAPPIRDLANQEGLWEALLNGLIDCVVSDHSPCTPDLKRAGDFFKAWGGIAGLQSTLDVMFDEA---- 344 (443)
T ss_pred HHHhhCcCcceEEcCCCCChHHHHHHHHHHHcCCccEEeCCCCCCChHHcCcCChhhCCCCeeEHHHhHHHHHHHH----
Confidence 00 0112345568889999999999876421 111111 0011111100
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCC-------cCCcccceecccCCCC
Q 012333 359 ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVP-------VHDRITSLVYCMRTEN 430 (466)
Q Consensus 359 ~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~-------~~~~~~~~~~~~~~~~ 430 (466)
....+++++++++++|.|||+++|+ +++|+|++|++|||||+|.+ .|...+ ..+|+....+ ..+
T Consensus 345 ----~~~~~l~~~~~~~~~t~~pA~~~g~-~~~G~l~~G~~Ad~vi~d~~~~~~~~~~~~~~~~~~~p~~g~~~---~g~ 416 (443)
T TIGR03178 345 ----VQKRGLPLEDIARLMATNPAKRFGL-AQKGRIAPGKDADFVFVDPDESYTLTPDDLYYRHKVSPYVGRTI---GGR 416 (443)
T ss_pred ----HHhcCCCHHHHHHHHhHHHHHHcCC-CCCCccCCCCcCCEEEEcCCCcEEEcHHHhhhcCCCCCcCCcEE---eeE
Confidence 0123499999999999999999999 56799999999999999996 443221 1233333222 358
Q ss_pred eeEEEEccEEEEECCeeeeccHHHH
Q 012333 431 VVSVMCNGQWVMKNKKILLLMRGRL 455 (466)
Q Consensus 431 v~~v~v~G~~v~~~g~~~~~~~~~~ 455 (466)
|..||++|++||++|++.+...|++
T Consensus 417 v~~t~v~G~~v~~~g~~~~~~~g~~ 441 (443)
T TIGR03178 417 VRATYLRGQCIYDDEQFIGAPKGQL 441 (443)
T ss_pred EEEEEECCEEEEECCeeccCCCCcc
Confidence 9999999999999999876555544
No 47
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=100.00 E-value=2.8e-32 Score=257.84 Aligned_cols=338 Identities=20% Similarity=0.270 Sum_probs=215.5
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|++++. +...+|+|+||||++|++..+....++ ....++|++|++|+|||||+|+|+.... ..+
T Consensus 2 ~li~n~~v~~~~~----~~~~dvlI~~gkI~~Ig~~~~~~~~~~-~~~~i~d~~G~~v~PGlID~HvH~~~gg----~~~ 72 (389)
T TIGR01975 2 TLLKGAEVYAPEY----IGKKDILIANDKIIAIADEIPSTKDFV-PNCVVVGLEGMIAVPGFIDQHVHIIGGG----GEG 72 (389)
T ss_pred EEEECcEEEcCCc----CcceeEEEECCEEEEEcCCccccccCC-CCeEEECCCCCEEccCEeehhhcccccc----ccC
Confidence 5899999997532 356799999999999998654321111 1334556699999999999999985421 000
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-----cC---HHHHHHHHHHhCCeEEeeccccc
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QH---VSEMAKAVELLGLRACLVQSTMD 172 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-----~~---~~~~~~~~~~~g~~~~~~~~~~~ 172 (466)
.+ ...++ + ..+.+++++||||++++.+ .+ .....++....|++.+.....++
T Consensus 73 ~~-------------~~~~~-e------~~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~Gir~~~~~g~~~ 132 (389)
T TIGR01975 73 GP-------------TTRTP-E------LTLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEGISCYMLTGAYH 132 (389)
T ss_pred CC-------------ccCCH-H------HHHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhCCEEEEEccccc
Confidence 00 01122 1 1356789999999999864 22 33678888999999988766553
Q ss_pred CCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCe-EEEEeecccccCCHHHHHHHHHHHHHcC----Cc--cceeccC
Q 012333 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI-RIWFGIRQIMNATDRLLLETRDMAREFK----TG--IHMHVAE 245 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~l~~~~~~a~~~~----~~--v~~H~~~ 245 (466)
.. ......+... .....+.. -.+ ++.+..+.....+.+.+.++.+.++..| .+ +++|..+
T Consensus 133 ~p----~~t~t~~~~~----d~~~~d~i-----iG~~~ia~sd~r~~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~ 199 (389)
T TIGR01975 133 VP----SRTITGSVES----DLLLIDKV-----IGVGEIAISDHRSAQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGD 199 (389)
T ss_pred CC----Ccccccchhh----heeeehhh-----cccceEEEccCcCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 21 1111111110 01111111 123 2445556666788899999999999988 88 9999987
Q ss_pred CcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC------hhhHHHHHhcCCeEEECccchhhc--cCCc---
Q 012333 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN------HTEIGLLSRAGVKVSHCPASAMRM--LGFA--- 314 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~------~~~~~~~~~~g~~~~~~p~~~~~~--~~~~--- 314 (466)
.+...+...+. ++.-.. ....-|..+++ ++.++.+++-|..-+..|.....+ ...+
T Consensus 200 ~~~~l~~l~~~----------~~~~di---~~~~f~pth~~r~~~l~~~~i~~~~~gg~iDv~~~~~~~~l~~~~~~~~~ 266 (389)
T TIGR01975 200 SKRALQPIYEL----------VENTDV---PITQFLPTHINRNVPLFEAGLEFAKKGGTIDLTSSIDPQFRKEGEVAPAE 266 (389)
T ss_pred chhhHHHHHHH----------HHhcCC---ChhheecCccCCCHHHHHHHHHHHHhCCcEEEeCCCCccchhccccChHH
Confidence 65543332221 111111 11122333443 344565665555444444332211 2222
Q ss_pred cHHHHHHcCCc---EEEccCCCCCCCCC---------------CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 012333 315 PIKEMLHADIC---VSLGTDGAPSNNRM---------------SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (466)
Q Consensus 315 ~~~~~~~~gi~---~~~gsD~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 376 (466)
.++.++++|++ ++++||.....+.+ +++..++... .. .++++++++++
T Consensus 267 ~~~~~~~~Gv~~~~i~isSD~~gs~p~~~~~g~~~~~g~g~~~sl~~~~~~lv--~~------------g~ls~~eal~~ 332 (389)
T TIGR01975 267 GIKKALEAGVPLEKVTFSSDGNGSQPFFDENGELTGLGVGSFETLFEEVREAV--KD------------GDVPLEKALRV 332 (389)
T ss_pred HHHHHHHcCCCcceEEEEeCCCCCCCccccccccccCCcCcHHHHHHHHHHHH--Hh------------CCCCHHHHHHH
Confidence 45889999997 49999985322111 1234443322 11 13999999999
Q ss_pred HhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeee
Q 012333 377 ATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 448 (466)
Q Consensus 377 ~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 448 (466)
+|.|||++||++ ++|+|++|++|||+|||.+ ..+..||.+|++++++|++.
T Consensus 333 ~T~npA~~Lgl~-~~G~I~~G~~ADlvild~~--------------------~~i~~v~~~G~~v~~~g~~~ 383 (389)
T TIGR01975 333 ITSNVAGVLNLT-GKGEISPGNDADLVVLDPD--------------------LRIHSVIARGKLMVKDGKAC 383 (389)
T ss_pred HHHHHHHHhCCC-CCCeECCCCcCCEEEEcCC--------------------CCEEEEEECCEEEEECCEEE
Confidence 999999999996 6899999999999999987 47899999999999999976
No 48
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=100.00 E-value=1.3e-32 Score=270.33 Aligned_cols=378 Identities=18% Similarity=0.185 Sum_probs=214.2
Q ss_pred eEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccC
Q 012333 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (466)
Q Consensus 20 ~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~ 99 (466)
|++|+|++|+++++ ..+++|+|+||+|++|++.... + .+.++||++|++|+|||||+|+|+....
T Consensus 1 dl~i~~~~v~~~~~----~~~~~v~I~~g~I~~i~~~~~~----~-~~~~~iDa~G~~v~PG~ID~H~H~~~~~------ 65 (447)
T cd01315 1 DLVIKNGRVVTPDG----VREADIAVKGGKIAAIGPDIAN----T-EAEEVIDAGGLVVMPGLIDTHVHINEPG------ 65 (447)
T ss_pred CEEEECCEEECCCC----ceEeEEEEECCEEEEEeCCCCC----C-CCCeEEECCCCEEeccEeeceeccCCCC------
Confidence 68999999996422 3457999999999999875321 1 3678999999999999999999983210
Q ss_pred CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc---C---HHHHHHHHHHhCCeEEeecccccC
Q 012333 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---H---VSEMAKAVELLGLRACLVQSTMDC 173 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~---~---~~~~~~~~~~~g~~~~~~~~~~~~ 173 (466)
....+ ......+.++.+||||+++++.. . ...+...................
T Consensus 66 ------------------~~~~e---~~~~~s~aal~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~- 123 (447)
T cd01315 66 ------------------RTEWE---GFETGTKAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWG- 123 (447)
T ss_pred ------------------ccccc---cHHHHHHHHHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEE-
Confidence 00001 11123455799999999998621 1 12222222221111111111110
Q ss_pred CCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecc---cccCCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 012333 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (466)
+... . ..+ .++++.+.+...++.+..... ....+.+.+.++++.+++++.++.+|+.......
T Consensus 124 --~~~~-----~---~~~----ei~~l~~~G~~giKv~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~vH~e~~~~~~ 189 (447)
T cd01315 124 --GLVP-----G---NLD----QLRPLDEAGVVGFKCFLCPSGVDEFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITE 189 (447)
T ss_pred --eecC-----C---CHH----HHHHHHHcCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHH
Confidence 0110 0 111 123333334455665554332 2235778899999999999999999997643211
Q ss_pred HHHHh------------hcCCCC-----chHHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCe--EEECccchhhc
Q 012333 251 QVVMD------------TRKVDH-----GTVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCPASAMRM 310 (466)
Q Consensus 251 ~~~~~------------~~~~~~-----~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~--~~~~p~~~~~~ 310 (466)
..... ..+... .....+......+.+..+.|...- +-+.++.++..|.. +.+||+.....
T Consensus 190 ~~~~~~~~~g~~~~~~~~~~~p~~~e~~~~~~~~~la~~~g~~ihi~h~s~~~~~~~i~~~~~~g~~i~~e~~~h~l~~~ 269 (447)
T cd01315 190 ALQEQAKAKGKRDYRDYLASRPVFTEVEAIQRILLLAKETGCRLHIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFT 269 (447)
T ss_pred HHHHhHhhcCCCChHHhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCceEEEeccccEEEc
Confidence 11100 000000 011122223333445555664431 12334444555544 34566532100
Q ss_pred --------------------cCCccHHHHHHcCCcEEEccCCCCCCCC------CCHHH--------HHHHHHHHhcccc
Q 012333 311 --------------------LGFAPIKEMLHADICVSLGTDGAPSNNR------MSIVD--------EMYLASLINKGRE 356 (466)
Q Consensus 311 --------------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~------~~~~~--------~~~~~~~~~~~~~ 356 (466)
.....+..+++.|...+++|||.|.... .+++. ...+..++...
T Consensus 270 ~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~~i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~-- 347 (447)
T cd01315 270 AEDVPDGGTEFKCAPPIRDAANQEQLWEALENGDIDMVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEA-- 347 (447)
T ss_pred HHHccCCCCceEECCCCCChHHHHHHHHHHhCCceeEEeCCCCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHH--
Confidence 1112445578889999999999876310 01111 00011111100
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCC-CCCCC----cCCcccceecccCCCCe
Q 012333 357 VFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS-WPMVP----VHDRITSLVYCMRTENV 431 (466)
Q Consensus 357 ~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~-~~~~~----~~~~~~~~~~~~~~~~v 431 (466)
....++|++++++++|.+||+++|+++++|+|++|++|||||+|.+. +...+ ..++...+.......+|
T Consensus 348 ------~~~~~~~~~~~~~~~t~~pa~~~g~~~~~G~l~~g~~Ad~~v~d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v 421 (447)
T cd01315 348 ------VNKRGLSLEDIARLMCENPAKLFGLSHQKGRIAVGYDADFVVWDPEEEFTVDAEDLYYKNKISPYVGRTLKGRV 421 (447)
T ss_pred ------HHcCCCCHHHHHHHHhHHHHHHhCCCCCCccccCCCCCCEEEEcCCCCEEEcHHHccccCCCCCccCeEEeeeE
Confidence 01235999999999999999999997678999999999999999873 22111 11112222122223579
Q ss_pred eEEEEccEEEEECCeeeeccHHHHH
Q 012333 432 VSVMCNGQWVMKNKKILLLMRGRLF 456 (466)
Q Consensus 432 ~~v~v~G~~v~~~g~~~~~~~~~~~ 456 (466)
..||++|++||++|+++....|+++
T Consensus 422 ~~ti~~G~~v~~~~~~~~~~~G~~~ 446 (447)
T cd01315 422 HATILRGTVVYQDGEVVGEPLGQLL 446 (447)
T ss_pred EEEEECCEEEEECCeEccCCCceEe
Confidence 9999999999999998754455543
No 49
>PRK06189 allantoinase; Provisional
Probab=100.00 E-value=1.1e-32 Score=269.48 Aligned_cols=378 Identities=17% Similarity=0.189 Sum_probs=220.7
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
+++|++|+|++|+++++ ...++|.|+||+|++|++.... ++.++||++|++|+|||||+|+|+....
T Consensus 1 ~~~~~~i~~~~v~~~~~----~~~~~v~i~~G~I~~i~~~~~~------~~~~~iD~~g~~vlPG~ID~H~H~~~~~--- 67 (451)
T PRK06189 1 MMYDLIIRGGKVVTPEG----VYRADIGIKNGKIAEIAPEISS------PAREIIDADGLYVFPGMIDVHVHFNEPG--- 67 (451)
T ss_pred CCccEEEECCEEEcCCC----cEEEEEEEECCEEEEecCCCCC------CCCeEEECCCCEEecCEEEeeeccCCCC---
Confidence 35789999999997443 2457999999999999874321 3567999999999999999999983210
Q ss_pred ccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecC-c--c---CHHHHHHHHHHhCCeEEeeccc
Q 012333 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-G--Q---HVSEMAKAVELLGLRACLVQST 170 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~-~--~---~~~~~~~~~~~~g~~~~~~~~~ 170 (466)
....+ ......+.++.+|||++++++ . + ....+.................
T Consensus 68 ---------------------~~~~~---~~~~~~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~~d~~~ 123 (451)
T PRK06189 68 ---------------------RTHWE---GFATGSAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFAL 123 (451)
T ss_pred ---------------------CCCcc---cHHHHHHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCceEeEEE
Confidence 00011 112233568899999999985 1 1 1222222222222111111111
Q ss_pred ccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEee---cccccCCHHHHHHHHHHHHHcCCccceeccCCc
Q 012333 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI---RQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (466)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 247 (466)
. . +... .... .+..+.+.+...++.+... ...+..+...+.++++.+++.+..+.+|+.+..
T Consensus 124 ~-~--~~~~--------~~~~----~l~~l~~~Gv~~~k~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~e~~~ 188 (451)
T PRK06189 124 W-G--GLVP--------GNLE----HLRELAEAGVIGFKAFMSNSGTDEFRSSDDLTLYEGMKEIAALGKILALHAESDA 188 (451)
T ss_pred E-e--cccc--------cCHH----HHHHHHHcCCcEEEEEccccCCCCcCcCCHHHHHHHHHHHHhcCCeEEEECCChH
Confidence 1 0 0110 0112 1223333333334444322 122345667888889988899999999997644
Q ss_pred chhHHH--HhhcC--------CCCch-------HHHHhhhccCCCCeeEEEeecCC-hhhHHHHHhcCC--eEEECccch
Q 012333 248 YENQVV--MDTRK--------VDHGT-------VTFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGV--KVSHCPASA 307 (466)
Q Consensus 248 ~~~~~~--~~~~~--------~~~~~-------~~~~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~g~--~~~~~p~~~ 307 (466)
...... ....+ ..... ...+...+..+.+..+.|...-. -+.++.+++.|. .+.+||+..
T Consensus 189 ~~~~~~~~~~~~g~~~~~~~~~~~P~~~E~~~v~~~l~la~~~g~~~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~ph~L 268 (451)
T PRK06189 189 LTRHLTTQARQQGKTDVRDYLESRPVVAELEAVQRALLYAQETGCPLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYL 268 (451)
T ss_pred HHHHHHHHHHhcCCCChhHccccCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEeCHHHh
Confidence 211110 00000 00001 11222223334444455544311 133445555664 455777643
Q ss_pred hh-------------------c-cCCccHHHHHHcCCcEEEccCCCCCCCC----CCHHHH--------HHHHHHHhccc
Q 012333 308 MR-------------------M-LGFAPIKEMLHADICVSLGTDGAPSNNR----MSIVDE--------MYLASLINKGR 355 (466)
Q Consensus 308 ~~-------------------~-~~~~~~~~~~~~gi~~~~gsD~~~~~~~----~~~~~~--------~~~~~~~~~~~ 355 (466)
.. . ....++++++++|+.++++|||.|+... .+++.. .....+++..
T Consensus 269 ~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~- 347 (451)
T PRK06189 269 LFTEEDFERIGAVAKCAPPLRSRSQKEELWRGLLAGEIDMISSDHSPCPPELKEGDDFFLVWGGISGGQSTLLVMLTEG- 347 (451)
T ss_pred hcCHhHhhCcCCceEEeCCCCChhhHHHHHHHHhCCCceEEECCCCCCCHHHcCcCCcccCCCCceeHHHHHHHHHHHH-
Confidence 10 0 1124566789999999999999887432 122211 2222222211
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCC-------cCCcccceecccC
Q 012333 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVP-------VHDRITSLVYCMR 427 (466)
Q Consensus 356 ~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~-------~~~~~~~~~~~~~ 427 (466)
....+++++++++++|.|||++||+ +++|+|++|++|||+|+|++ .|...+ ..+|+....+
T Consensus 348 -------~~~~~l~~~~~~~~~t~npA~~lgl-~~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~~p~~g~~~--- 416 (451)
T PRK06189 348 -------YIERGIPLETIARLLATNPAKRFGL-PQKGRLEVGADADFVLVDLDETYTLTKEDLFYRHKQSPYEGRTF--- 416 (451)
T ss_pred -------HhcCCCCHHHHHHHHhhhHHHHhCC-CCCCcccCCCcCCEEEEcCCCCEEECHHHhhhcCCCCCcCCcEE---
Confidence 0123599999999999999999999 56799999999999999997 432221 1233333222
Q ss_pred CCCeeEEEEccEEEEECCeeeeccHHHHHHH
Q 012333 428 TENVVSVMCNGQWVMKNKKILLLMRGRLFQL 458 (466)
Q Consensus 428 ~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~ 458 (466)
..+|..||++|++||++|+++....|+++++
T Consensus 417 ~g~v~~tiv~G~~v~~~g~~~~~~~G~~~~~ 447 (451)
T PRK06189 417 PGRVVATYLRGQCVYQDGEVFPPPRGQLLRP 447 (451)
T ss_pred EeEEEEEEECCEEEEECCEEccCCCCcEecC
Confidence 2579999999999999999887777777654
No 50
>PRK09357 pyrC dihydroorotase; Validated
Probab=100.00 E-value=9e-33 Score=269.39 Aligned_cols=361 Identities=19% Similarity=0.202 Sum_probs=213.8
Q ss_pred eEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccC
Q 012333 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (466)
Q Consensus 20 ~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~ 99 (466)
+++|+|++|++++ ..+.+++|.|+||+|++|++... .++.++||++|++|+|||||+|+|+...
T Consensus 2 ~~~i~~~~v~~~~---~~~~~~~I~I~dg~I~~i~~~~~------~~~~~~iD~~g~~v~PG~ID~H~H~~~~------- 65 (423)
T PRK09357 2 MILIKNGRVIDPK---GLDEVADVLIDDGKIAAIGENIE------AEGAEVIDATGLVVAPGLVDLHVHLREP------- 65 (423)
T ss_pred cEEEEeEEEECCC---CCcceeeEEEECCEEEEeeCCCC------CCCCeEEECCCCEEeCCEEecccccCCC-------
Confidence 5899999999532 34567899999999999986421 1356899999999999999999997320
Q ss_pred CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc--------CHHHHHHHHHHhCCeEEeecccc
Q 012333 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTM 171 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~ 171 (466)
.....++ .....+.++.+|||++.+++.. ......+.....+.+.+.....+
T Consensus 66 ----------------~~~~~e~----~~~~~~~a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (423)
T PRK09357 66 ----------------GQEDKET----IETGSRAAAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGAI 125 (423)
T ss_pred ----------------Ccccccc----HHHHHHHHHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEE
Confidence 0011111 1122344689999999998732 12233344444554443333222
Q ss_pred cCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhH
Q 012333 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (466)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (466)
..+ ... ..+.+...+. +. .+.. +..+..+..+++.+.++++.+++++.++++|+.+......
T Consensus 126 ~~~--~~~--------~~~~~~~~l~----~~---gv~~-~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~~~~ 187 (423)
T PRK09357 126 TKG--LAG--------EELTEFGALK----EA---GVVA-FSDDGIPVQDARLMRRALEYAKALDLLIAQHCEDPSLTEG 187 (423)
T ss_pred EeC--CCC--------ccHHHHHHHH----hC---CcEE-EECCCcccCCHHHHHHHHHHHHhcCCEEEEeCCCHHHhhc
Confidence 211 110 0111112221 11 1222 4455556678889999999999999999999987543221
Q ss_pred HH------HhhcCC-CCch-------HHHHhhhccCCCCeeEEEeecCCh-hhHHHHHhcCCe--EEECccchh------
Q 012333 252 VV------MDTRKV-DHGT-------VTFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVK--VSHCPASAM------ 308 (466)
Q Consensus 252 ~~------~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~g~~--~~~~p~~~~------ 308 (466)
.. ....+. .... ...+...+..+.+..+.|...... +.++.+++.|.. +.+||++..
T Consensus 188 ~~~~~g~~~~~~~~~~~p~~~E~~~i~~~~~la~~~g~~~hi~H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~ 267 (423)
T PRK09357 188 GVMNEGEVSARLGLPGIPAVAEEVMIARDVLLAEATGARVHICHVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDL 267 (423)
T ss_pred ccccCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHH
Confidence 00 000111 1011 112222223344555666554322 235555556655 458885321
Q ss_pred -------------hc-cCCccHHHHHHcCCcEEEccCCCCCCCCCC---HH--------HHHHHHHHHhcccccccCCCC
Q 012333 309 -------------RM-LGFAPIKEMLHADICVSLGTDGAPSNNRMS---IV--------DEMYLASLINKGREVFANGTT 363 (466)
Q Consensus 309 -------------~~-~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~---~~--------~~~~~~~~~~~~~~~~~~~~~ 363 (466)
|. ....++++++++|+.+++||||.|+....+ ++ .+.....+.... .
T Consensus 268 ~~~~~~~k~~Pplr~~~~~~~l~~~l~~G~~~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~--------~ 339 (423)
T PRK09357 268 LTYDPNYKVNPPLRTEEDREALIEGLKDGTIDAIATDHAPHAREEKECEFEAAPFGITGLETALSLLYTTL--------V 339 (423)
T ss_pred hCcCCceEECCCCCCHHHHHHHHHHHHcCCCeEEecCCCCCChHHccCCHhhCCCCceEHHHHHHHHHHHH--------H
Confidence 00 123567788999999999999998753211 11 111112222111 1
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCC-CCCCc--CCcccceecccC--CCCeeEEEEcc
Q 012333 364 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW-PMVPV--HDRITSLVYCMR--TENVVSVMCNG 438 (466)
Q Consensus 364 ~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~-~~~~~--~~~~~~~~~~~~--~~~v~~v~v~G 438 (466)
....++++++++++|.|||+++|+.+ |+|++|++|||+|+|.+.. ...+. .+.....+|... ..+|..||++|
T Consensus 340 ~~~~~~~~~~~~~~t~~~A~~~g~~~--G~i~~G~~AD~~i~d~~~~~~v~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G 417 (423)
T PRK09357 340 KTGLLDLEQLLEKMTINPARILGLPA--GPLAEGEPADLVIFDPEAEWTVDGEDFASKGKNTPFIGMKLKGKVVYTIVDG 417 (423)
T ss_pred HcCCCCHHHHHHHHhHHHHHHhCCCC--CccCCCCcCCEEEEcCCCCEEEchhhcccCCCCCCCcCCEEeeEEEEEEECC
Confidence 12359999999999999999999954 9999999999999998842 22111 111112222221 35799999999
Q ss_pred EEEEEC
Q 012333 439 QWVMKN 444 (466)
Q Consensus 439 ~~v~~~ 444 (466)
++||++
T Consensus 418 ~~v~~~ 423 (423)
T PRK09357 418 KIVYQD 423 (423)
T ss_pred EEEecC
Confidence 999975
No 51
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=100.00 E-value=3.1e-32 Score=263.07 Aligned_cols=342 Identities=22% Similarity=0.280 Sum_probs=212.9
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
++++|+|++|++.+. ..+++|+|+||+|++|++..+.... .+..++||++|++|+|||||+|+|+....
T Consensus 1 ~~~~i~~~~v~~~~~----~~~~~i~i~~g~I~~v~~~~~~~~~--~~~~~~id~~g~~v~PG~id~H~H~~~~~----- 69 (388)
T PRK10657 1 MFTLLKNAHVYAPED----LGKKDILIAGGKIIAIADNINIPDI--VPDIEVIDASGKILVPGFIDQHVHIIGGG----- 69 (388)
T ss_pred CeEEEEccEEECCCC----CcceEEEEECCEEEEecCCcccccc--CCCCeEEECCCCEEcccceeeeeCcccCC-----
Confidence 458999999997542 2457999999999999875432111 12468999999999999999999985211
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-----cCH---HHHHHHHHHhCCeEEeeccc
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHV---SEMAKAVELLGLRACLVQST 170 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-----~~~---~~~~~~~~~~g~~~~~~~~~ 170 (466)
.... | ...+. + ....+++.+|+||++++.+ ... ....+.....|++.+.....
T Consensus 70 ~~~~---~---------~~~t~-~------~~~~~~~~~GvTTvvd~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~ 130 (388)
T PRK10657 70 GEGG---F---------STRTP-E------VQLSDLTEAGITTVVGLLGTDGITRSMESLLAKARALEEEGISAYMYTGS 130 (388)
T ss_pred CCcc---c---------ccCCH-H------HHHHHHHhCCceEEECCCCCCCCCCCHHHHHHHHHHHHhhCCEEEEEecC
Confidence 0000 0 01111 1 3456688999999999863 122 33355556889998855433
Q ss_pred ccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCC------ccceecc
Q 012333 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVA 244 (466)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~------~v~~H~~ 244 (466)
+.. +..+. .+...+.....+++... + +..+..+.....+++.+.++.+.++..+. ++++|+.
T Consensus 131 ~~~----~~~~~----~~~~~~~~~~~~~~~g~--g--~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~ 198 (388)
T PRK10657 131 YHV----PVRTI----TGSIRKDIVLIDKVIGV--G--EIAISDHRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMG 198 (388)
T ss_pred CCC----Cchhh----hcchhhceehhhhhhCc--c--eeeeccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 321 11000 01111111122222211 1 33355555566688888888887765444 7899987
Q ss_pred CCcchhHHHHhhcCCCCchH-HHHhhhccCCCCeeEEEeec---CChhhHHHHHhcCCeEEEC-ccchhhc----cCCcc
Q 012333 245 EIPYENQVVMDTRKVDHGTV-TFLDKIEFLQNNLLSAHTVW---VNHTEIGLLSRAGVKVSHC-PASAMRM----LGFAP 315 (466)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~H~~~---~~~~~~~~~~~~g~~~~~~-p~~~~~~----~~~~~ 315 (466)
+...... .+ +++...+....+.+..|... ..++.++.+ +.|..+.+. +...++. .....
T Consensus 199 ~~~~~l~-----------~v~~~l~~~Gv~~~~~~~~H~~~~~~~~~~~~~~~-~~G~~~~v~~~~~~~~~~~~~~~~~~ 266 (388)
T PRK10657 199 DGKKGLQ-----------PLFELLENTDIPISQFLPTHVNRNEPLFEQALEFA-KKGGVIDLTTSDPDFLGEGEVAPAEA 266 (388)
T ss_pred CchHHHH-----------HHHHHHHhcCCCcceeeCcccCCCHHHHHHHHHHH-HcCCeEEEecCCCcccccCccCHHHH
Confidence 5332111 12 23345555545555666554 323444444 456655332 2222222 12356
Q ss_pred HHHHHHcCC---cEEEccCCCCCCCCC---------------CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 012333 316 IKEMLHADI---CVSLGTDGAPSNNRM---------------SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377 (466)
Q Consensus 316 ~~~~~~~gi---~~~~gsD~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~ 377 (466)
+++++++|+ +++++||+....+.+ .++..++.... ..++|++++++++
T Consensus 267 l~~~~~~G~~~d~v~l~tD~~~~~~~~~~~g~~~~~g~~~~~~l~~~~~~~~~--------------~~gis~~~~l~~a 332 (388)
T PRK10657 267 LKRALEAGVPLSRVTLSSDGNGSLPKFDEDGNLVGLGVGSVESLLEEVRELVK--------------DEGLPLEDALKPL 332 (388)
T ss_pred HHHHHHcCCChhheEEECCCCCCCceeccCCCEeccCcCchhhHHHHHHHHHH--------------hcCCCHHHHHHHH
Confidence 789999998 789999974322111 13344432211 1259999999999
Q ss_pred hHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeee
Q 012333 378 TINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 449 (466)
Q Consensus 378 T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 449 (466)
|.|||+++|+++ +|+|++|++|||+++|.+ ..+..||++|++|++++++++
T Consensus 333 T~npA~~lg~~~-~G~l~~G~~AD~vv~~~~--------------------~~~~~~~~~G~~v~~~~~~~~ 383 (388)
T PRK10657 333 TSNVARFLKLNG-KGEILPGKDADLLVLDDD--------------------LRIEQVIAKGKLMVKDGKALV 383 (388)
T ss_pred HHHHHHHhCCCC-CCccCCCCccCEEEECCC--------------------CCEEEEEECCEEEEECCEEec
Confidence 999999999976 899999999999999943 479999999999999999864
No 52
>PRK07575 dihydroorotase; Provisional
Probab=100.00 E-value=4.5e-33 Score=270.74 Aligned_cols=368 Identities=17% Similarity=0.242 Sum_probs=213.2
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
+|++++|+|++|++.++ ....++|.|+||+|++|++.... + ...++||++|++|+|||||+|+|+...
T Consensus 1 ~~~~~~i~~~~i~~~~~---~~~~~~I~I~dg~I~~ig~~~~~----~-~~~~vid~~g~~v~PG~ID~H~H~~~~---- 68 (438)
T PRK07575 1 MMMSLLIRNARILLPSG---ELLLGDVLVEDGKIVAIAPEISA----T-AVDTVIDAEGLTLLPGVIDPQVHFREP---- 68 (438)
T ss_pred CcceEEEECCEEECCCC---CEEeeeEEEECCEEEEecCCCCC----C-CCCeEEECCCCEEcccEEEeeeccCCC----
Confidence 35789999999997532 23457999999999999874321 1 135899999999999999999997310
Q ss_pred ccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-----CHHHHHHHHHH----hCCeEEee
Q 012333 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVEL----LGLRACLV 167 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-----~~~~~~~~~~~----~g~~~~~~ 167 (466)
.....+.+ ....+.++++|||++++++.. ....+...... ..++..+.
T Consensus 69 --------------------~~~~~e~~---~~~~~aa~~gGvTt~~dmp~~~p~~~~~~~~~~~~~~a~~~~~v~~~~~ 125 (438)
T PRK07575 69 --------------------GLEHKEDL---FTASRACAKGGVTSFLEMPNTKPLTTTQAALDDKLARAAEKCVVNYGFF 125 (438)
T ss_pred --------------------CCcCcchH---HHHHHHHHhCCEEEEEECCCCCCCCCcHHHHHHHHHHhccCcEEEEEEE
Confidence 01111111 223345789999999998742 12222222222 12222111
Q ss_pred cccc----------cCCCCCCcccc---c-CChHHHHHHHHHHHHHhccCCCCCeEEEE--------------eeccc--
Q 012333 168 QSTM----------DCGEGLPASWA---V-RTTDDCIQSQKELYAKHHHAADGRIRIWF--------------GIRQI-- 217 (466)
Q Consensus 168 ~~~~----------~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------------~~~~~-- 217 (466)
.... ....++. .+. . .............++.. ...+.... +...+
T Consensus 126 ~~~~~~~l~~l~~~~~~~g~~-~f~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~h~e~~~l~~~~~~~~~g~~~~~~ 200 (438)
T PRK07575 126 IGATPDNLPELLTANPTCGIK-IFMGSSHGPLLVDEEAALERIFAEG----TRLIAVHAEDQARIRARRAEFAGISDPAD 200 (438)
T ss_pred ccccccCHHHHHHhhCCeEEE-EEEeeCCCCcccCcHHHHHHHHHhC----CCEEEEeCcChHHHHhhhHhhccCcCccc
Confidence 1110 0000000 000 0 00000000001111110 01111100 00000
Q ss_pred ---ccCCH---HHHHHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhH
Q 012333 218 ---MNATD---RLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEI 290 (466)
Q Consensus 218 ---~~~~~---~~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~ 290 (466)
...+. +.+.+++++++..+.++++ |+. .....+......+ ..+.. .+..|..+++.+++
T Consensus 201 ~~~~~p~~aE~~av~~~~~la~~~g~~lhi~HiS-t~~~v~~i~~~k~------------~~vt~-ev~phhL~l~~~~~ 266 (438)
T PRK07575 201 HSQIQDEEAALLATRLALKLSKKYQRRLHILHLS-TAIEAELLRQDKP------------SWVTA-EVTPQHLLLNTDAY 266 (438)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHCCCEEEEECC-CHHHHHHHHHhcC------------CCEEE-EEchhhheeCHHHH
Confidence 01112 4567788899999999988 887 3333322222110 01111 23445578888776
Q ss_pred HHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCCCCC---------C-CCH-HHHHHHHHHHhcccccc
Q 012333 291 GLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN---------R-MSI-VDEMYLASLINKGREVF 358 (466)
Q Consensus 291 ~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~~---------~-~~~-~~~~~~~~~~~~~~~~~ 358 (466)
+ +.+....++|+ +|. ....++++++++|+.++++|||.|++. . ..+ ..++....+.+...
T Consensus 267 ~---~~~~~~k~~PP--LR~~~d~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~l~~l~~~~~--- 338 (438)
T PRK07575 267 E---RIGTLAQMNPP--LRSPEDNEALWQALRDGVIDFIATDHAPHTLEEKAQPYPNSPSGMPGVETSLPLMLTAAM--- 338 (438)
T ss_pred h---CCCceEEEeCC--CCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHccCCcccCCCCcccHHHHHHHHHHHHh---
Confidence 5 35667778887 443 456788999999999999999998752 0 111 23344444443321
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCc--------CCcccceecccCCCC
Q 012333 359 ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HDRITSLVYCMRTEN 430 (466)
Q Consensus 359 ~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~~~~~~~~~ 430 (466)
...+|++++++++|.|||++||+ +++|+|++|++|||||+|++.....+. .+|+..+.+. .+
T Consensus 339 ------~~~lsl~~~~~~~s~npAk~lgl-~~~G~L~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~sp~~g~~~~---G~ 408 (438)
T PRK07575 339 ------RGKCTVAQVVRWMSTAVARAYGI-PNKGRIAPGYDADLVLVDLNTYRPVRREELLTKCGWSPFEGWNLT---GW 408 (438)
T ss_pred ------cCCCCHHHHHHHHhhhHHHHcCC-CCCCccCCCCcCCEEEEcCCCCEEEchHHccccCCCCCCCCCEEe---eE
Confidence 12499999999999999999999 456999999999999999884221111 2344333332 47
Q ss_pred eeEEEEccEEEEECCeeeeccHHHHH
Q 012333 431 VVSVMCNGQWVMKNKKILLLMRGRLF 456 (466)
Q Consensus 431 v~~v~v~G~~v~~~g~~~~~~~~~~~ 456 (466)
+..||++|++||++|+++....|+.+
T Consensus 409 v~~tiv~G~~v~~~g~~~~~~~G~~~ 434 (438)
T PRK07575 409 PVTTIVGGQIVFDRGQVNTEVRGQAL 434 (438)
T ss_pred EEEEEECCEEEEECCEEccCCCceEe
Confidence 89999999999999998755445443
No 53
>PRK09236 dihydroorotase; Reviewed
Probab=100.00 E-value=1e-32 Score=269.24 Aligned_cols=359 Identities=19% Similarity=0.271 Sum_probs=206.4
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
|.+++|+|++|++.+ .. ...+|.|+||+|++|++.... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 ~~~~~i~~~~v~~~~---~~-~~~~i~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~ID~HvH~~~~~---- 67 (444)
T PRK09236 1 MKRILIKNARIVNEG---KI-FEGDVLIENGRIAKIASSISA-----KSADTVIDAAGRYLLPGMIDDQVHFREPG---- 67 (444)
T ss_pred CccEEEECCEEEcCC---Cc-eEeEEEEECCEEEEecCCCCC-----CCCCeEEECCCCEECCCEEEcccccccCc----
Confidence 467899999999632 22 347999999999999864321 12568999999999999999999983210
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-----HHHHHHHHHHhCCeEEeeccccc
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMD 172 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~ 172 (466)
....+ ........++.+|||++++++... ...+...................
T Consensus 68 --------------------~~~~e---~~~~~~~aa~~~GvTtv~d~p~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~ 124 (444)
T PRK09236 68 --------------------LTHKG---DIASESRAAVAGGITSFMEMPNTNPPTTTLEALEAKYQIAAQRSLANYSFYF 124 (444)
T ss_pred --------------------ccccc---cHHHHHHHHHhCCcEEEEeCCCCCCCcCcHHHHHHHHHHhccCeEEEEEEEe
Confidence 00001 111233568999999999987432 22222222221111111111100
Q ss_pred CCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEee--------------------------cc----------
Q 012333 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI--------------------------RQ---------- 216 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------------------------~~---------- 216 (466)
+ .... . ..+.. .+.+.+...+++++.. |.
T Consensus 125 -~--~~~~----~----~~e~~----~l~~~g~~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~H~e~~~~~~~~~ 189 (444)
T PRK09236 125 -G--ATND----N----LDEIK----RLDPKRVCGVKVFMGASTGNMLVDNPETLERIFRDAPTLIATHCEDTPTIKANL 189 (444)
T ss_pred -c--cCcc----c----HHHHH----HHHHccCcEEEEEeccCCCCcccCcHHHHHHHHHhcCCEEEEecCCHHHHHHHH
Confidence 0 0000 0 00000 0000000111111100 00
Q ss_pred --------------------cccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCC
Q 012333 217 --------------------IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNN 276 (466)
Q Consensus 217 --------------------~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (466)
+.......+.++++++++.++++++|..+.......... ....+.+
T Consensus 190 ~~~~~~~g~~~~~~~~~~~rp~~ae~~av~~~~~la~~~~~~~hi~h~st~~~~~~i~~--------------~~~~g~~ 255 (444)
T PRK09236 190 AKYKEKYGDDIPAEMHPLIRSAEACYKSSSLAVSLAKKHGTRLHVLHISTAKELSLFEN--------------GPLAEKR 255 (444)
T ss_pred HHHHHhcCCCCChhhccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHH--------------HHHCCCC
Confidence 000011123556677777777777765554433322221 1112233
Q ss_pred e---eEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCCCCC------------CCC
Q 012333 277 L---LSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN------------RMS 340 (466)
Q Consensus 277 ~---~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~~------------~~~ 340 (466)
. +..|+.++++++++. .+..+.++|. ++. ....++++++++|+.+++||||.+... .+.
T Consensus 256 vt~e~~~H~l~l~~~~~~~---~~~~~~~~Pp--lr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~G~~ 330 (444)
T PRK09236 256 ITAEVCVHHLWFDDSDYAR---LGNLIKCNPA--IKTASDREALRQALADDRIDVIATDHAPHTWEEKQGPYFQAPSGLP 330 (444)
T ss_pred EEEEEchhhhhcCHHHHhc---cCceEEECCC--CCCHHHHHHHHHHHhCCCCcEEECCCCCCCHHHhcCCcccCCCCcc
Confidence 3 345777888877763 4788899996 333 455688999999999999999987621 111
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCccc
Q 012333 341 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRIT 420 (466)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~ 420 (466)
.++.+ ...+.+.. ....+|++++++++|.|||+++|+. ++|+|++|++|||+|+|++.....+..+..+
T Consensus 331 ~~e~~-l~~l~~~v---------~~~~~~~~~~~~~~t~~pA~~lgl~-~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~s 399 (444)
T PRK09236 331 LVQHA-LPALLELV---------HEGKLSLEKVVEKTSHAPAILFDIK-ERGFIREGYWADLVLVDLNSPWTVTKENILY 399 (444)
T ss_pred cHHHH-HHHHHHHH---------HhcCCCHHHHHHHHHHhHHHhcCCC-CCCccccCCcCCEEEEcCCCCEEEchHHhcc
Confidence 22221 11111111 1124999999999999999999994 5799999999999999987432222222222
Q ss_pred ceecc-----cCCCCeeEEEEccEEEEECCeeeeccHHHHHH
Q 012333 421 SLVYC-----MRTENVVSVMCNGQWVMKNKKILLLMRGRLFQ 457 (466)
Q Consensus 421 ~~~~~-----~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~ 457 (466)
...+. ....+|..||++|++||++|+++....|+.++
T Consensus 400 ~~~~sp~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~~G~~~~ 441 (444)
T PRK09236 400 KCGWSPFEGRTFRSRVATTFVNGQLVYHNGQLVESCRGQRLE 441 (444)
T ss_pred cCCCCCCCCCEEeeeEEEEEECCEEEEECCEEccCcCceEee
Confidence 21111 22458999999999999999987554565543
No 54
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=1.1e-31 Score=257.70 Aligned_cols=331 Identities=19% Similarity=0.186 Sum_probs=199.5
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhh-------hhhccCCCeEEeCCCcEEeecccccccCC
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL-------QQFSQMADQIIDLQSQILLPGFVNTHVHT 89 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~-------~~~~~~~~~~iD~~G~~v~PG~ID~H~H~ 89 (466)
+..|++|+|++|++.. + ...++|.|+||+|++|++..... ..+...++++||++|++|+|||||+|+|+
T Consensus 69 ~~~DlVI~Na~IiD~~--g--i~~adI~IkDGrIvaIG~~~~p~~~~gv~~~~~ig~~tevIDaeG~iV~PG~ID~HVH~ 144 (573)
T PRK13206 69 GAPDTVITGAVILDHW--G--IVKADVGIRDGRIVAIGKAGNPDIMDGVHPDLVIGPSTEIIAGNGRILTAGAIDCHVHF 144 (573)
T ss_pred CCCCEEEECeEEECCC--C--eEEEEEEEECCEEEEEeCCCCccccccccccccCCCCCEEEECCCCEEEeCEEeeeecc
Confidence 4679999999999532 2 24579999999999999753210 00112357899999999999999999998
Q ss_pred cccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC---------------HHHHH
Q 012333 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---------------VSEMA 154 (466)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~---------------~~~~~ 154 (466)
. .+.. .+.++.+||||+++++... ...+.
T Consensus 145 ~----------------------------~Pg~--------~~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~l~~~~ 188 (573)
T PRK13206 145 I----------------------------CPQI--------VDEALAAGITTLIGGGTGPAEGSKATTVTPGAWHLARML 188 (573)
T ss_pred C----------------------------CchH--------HHHHHcCCeEEEEcCCCCccccCcccccccchhHHHHHH
Confidence 2 1111 1558999999999864221 01111
Q ss_pred HHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHH
Q 012333 155 KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE 234 (466)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~ 234 (466)
+......++..+ .+.+. ... .+.+.++.+.+...++.+ ..+..+++.+.++++.|++
T Consensus 189 ~aa~~~pvn~g~------~g~g~------~~~-------~~~L~el~~aGA~GfKi~----~d~g~t~~~i~~aL~~A~~ 245 (573)
T PRK13206 189 EALDGWPVNVAL------LGKGN------TVS-------AEALWEQLRGGAGGFKLH----EDWGSTPAAIDACLRVADA 245 (573)
T ss_pred HHhhcCceeEEE------ecCcC------cCC-------HHHHHHHHHCCCcEEeec----CccCCCHHHHHHHHHHHHH
Confidence 111111111111 01010 000 112333344444444432 3345789999999999999
Q ss_pred cCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecC----ChhhHHHHHhcCCeE-EECccch--
Q 012333 235 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV----NHTEIGLLSRAGVKV-SHCPASA-- 307 (466)
Q Consensus 235 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~g~~~-~~~p~~~-- 307 (466)
++.++.+|+....... ..+. ......+......|.... .++.++..-..++.. +++|+--
T Consensus 246 ~gv~V~iHadtlne~g------------~~E~-t~aa~~gr~iH~~H~egaggghapd~~~~~~~~n~lp~stnpt~p~~ 312 (573)
T PRK13206 246 AGVQVALHSDTLNEAG------------FVED-TLAAIAGRSIHAYHTEGAGGGHAPDIITVASHPNVLPSSTNPTRPHT 312 (573)
T ss_pred hCCEEEEECCCccccc------------hhhH-HHHHhcCCeEEEEeccCCCcCcccHHHHhcCCCCCcCCCCCCCCCCc
Confidence 9999999997543221 1111 111111222223332111 123333332223221 1222211
Q ss_pred -------------------------------hhccCCccHHHHHHcCCcEEEccCCCCCCCC----CCHHHHHHHHHHHh
Q 012333 308 -------------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNR----MSIVDEMYLASLIN 352 (466)
Q Consensus 308 -------------------------------~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~----~~~~~~~~~~~~~~ 352 (466)
.|...+..-..+.+.|+..+++||++..+.- ..+|.....+
T Consensus 313 ~nt~~e~~~m~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~~~~~SDs~~~~~~~e~~~~~~q~a~~~---- 388 (573)
T PRK13206 313 VNTLDEHLDMLMVCHHLNPAVPEDLAFAESRIRPSTIAAEDVLHDMGAISMIGSDSQAMGRIGEVVLRTWQTAHVM---- 388 (573)
T ss_pred ccchhhhhCeEEeeccCCCCCcchhhhhhhhccceeeccCchHhhCCcEEeccCCccccccccchhhhHHHHHHHH----
Confidence 1112233445689999999999999874332 2344444333
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCee
Q 012333 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVV 432 (466)
Q Consensus 353 ~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~ 432 (466)
+.+.....++...+.++..++|+++|.+||+++|+++.+|+|++||.|||||||++.+. .++.
T Consensus 389 ~~rr~~l~g~~~~~~~~v~~al~~yT~nPA~alG~~~~~GsLe~Gk~ADlVvld~d~f~-----------------~~~~ 451 (573)
T PRK13206 389 KRRRGALPGDGRADNNRARRYVAKYTICPAVAHGIDHEIGSVEVGKLADLVLWEPAFFG-----------------VRPH 451 (573)
T ss_pred HhccCCCCCCCcccchhHHHHHHHHHHHHHHHhCCCcCCcccCCCCcCCEEEECccccC-----------------CCcc
Confidence 22222222333356799999999999999999999888999999999999999998332 3688
Q ss_pred EEEEccEEEEEC
Q 012333 433 SVMCNGQWVMKN 444 (466)
Q Consensus 433 ~v~v~G~~v~~~ 444 (466)
.||++|+++|..
T Consensus 452 ~ti~~G~iv~~~ 463 (573)
T PRK13206 452 AVLKGGAIAWAA 463 (573)
T ss_pred EEEECCEEEEec
Confidence 999999999975
No 55
>PRK09061 D-glutamate deacylase; Validated
Probab=100.00 E-value=2.8e-31 Score=261.32 Aligned_cols=380 Identities=19% Similarity=0.146 Sum_probs=227.2
Q ss_pred cccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccc
Q 012333 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~ 95 (466)
.+++|++|+|++|+++++ .....++|.|+||+|++|++... .+.++||++|++|+|||||+|+|....
T Consensus 16 ~~~~~~li~~~~vid~~~--~~~~~~~v~I~~G~I~~ig~~~~-------~~~~viD~~g~~v~PG~ID~H~H~~~~--- 83 (509)
T PRK09061 16 MAPYDLVIRNGRVVDPET--GLDAVRDVGIKGGKIAAVGTAAI-------EGDRTIDATGLVVAPGFIDLHAHGQSV--- 83 (509)
T ss_pred cccCCEEEECcEEEeCCC--CeeccceEEEECCEEEEecCCCC-------CCCeEEeCCCCEEecCeEeeeeCCCCC---
Confidence 345789999999996443 33345799999999999987421 356899999999999999999997210
Q ss_pred cccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecC-c-cCHHHHHHHHHHhC--CeEEeecccc
Q 012333 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-G-QHVSEMAKAVELLG--LRACLVQSTM 171 (466)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~-~-~~~~~~~~~~~~~g--~~~~~~~~~~ 171 (466)
. ....++.+||||++++. + .......+.....+ ++.....+..
T Consensus 84 ----------------------~-----------~~~~~~~~GvTtvv~~~~~~~p~~~~~~~~~~~~~~vn~~~~~~~~ 130 (509)
T PRK09061 84 ----------------------A-----------AYRMQAFDGVTTALELEAGVLPVARWYAEQAGEGRPLNYGASVGWT 130 (509)
T ss_pred ----------------------c-----------cchhhccCCceeEEeeccCCCCHHHHHHHHHhcCCcceeehhcCcH
Confidence 0 01235788999999872 2 22333333333333 2322211110
Q ss_pred ------cCCC---CCC---------c-ccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHH
Q 012333 172 ------DCGE---GLP---------A-SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (466)
Q Consensus 172 ------~~~~---~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a 232 (466)
..++ +.. . ......+.+.+.+..+++++..+.|...++. ...+.+..+.+++.++++.+
T Consensus 131 ~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~m~~ll~~al~~Ga~gis~--~~~y~p~~~~~eL~~l~~~A 208 (509)
T PRK09061 131 PARIAVLTGPQAEGTIADFGKALGDPRWQERAATPAELAEILELLEQGLDEGALGIGI--GAGYAPGTGHKEYLELARLA 208 (509)
T ss_pred HHHHHHhCCcccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHCCCCEEec--CCccCCCCCHHHHHHHHHHH
Confidence 0000 000 0 0111122344555666666555555444442 22333456888999999999
Q ss_pred HHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh-------hhHHHHHhcCCeE--EEC
Q 012333 233 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKV--SHC 303 (466)
Q Consensus 233 ~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-------~~~~~~~~~g~~~--~~~ 303 (466)
+++|.++.+|+.+........ + .....+.+......+.+..+.|...+.. +.++++++.|+.+ ..+
T Consensus 209 ~~~g~~v~~H~e~~~~~~~~~-e----~~av~~~i~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~Ar~~Gi~Vt~e~~ 283 (509)
T PRK09061 209 ARAGVPTYTHVRYLSNVDPRS-S----VDAYQELIAAAAETGAHMHICHVNSTSLRDIDRCLALVEKAQAQGLDVTTEAY 283 (509)
T ss_pred HHcCCEEEEEecCcccCCchh-H----HHHHHHHHHHHHHhCCCEEEEeeccCCcccHHHHHHHHHHHHHcCCcEEEEec
Confidence 999999999997653210000 0 0012334444555566788888876432 4466777777665 477
Q ss_pred ccch-----------h--h-----------c-------cC----------------------------CccHHHHHHcCC
Q 012333 304 PASA-----------M--R-----------M-------LG----------------------------FAPIKEMLHADI 324 (466)
Q Consensus 304 p~~~-----------~--~-----------~-------~~----------------------------~~~~~~~~~~gi 324 (466)
|+.. . + . +. ...+...+.++.
T Consensus 284 P~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~p~ 363 (509)
T PRK09061 284 PYGAGSTVVGAAFFDPGWLERMGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSVLFPG 363 (509)
T ss_pred CcchhhhhhcccccCHHHHHHhCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHhCCCC
Confidence 7761 0 0 0 00 112444555564
Q ss_pred cEEEccCCCCCCCC------------C-CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC-----
Q 012333 325 CVSLGTDGAPSNNR------------M-SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL----- 386 (466)
Q Consensus 325 ~~~~gsD~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg----- 386 (466)
. +++||+.|.... . ....+++.+..+.+....+. .....+|++++++++|.+||++||
T Consensus 364 ~-~i~sD~~p~~~~~~~~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~v---~~~~~isl~~ai~~~T~~pA~~lg~~~~~ 439 (509)
T PRK09061 364 A-AIASDAMPWTWSDGTVYEGDAWPLPEDAVSHPRSAGTFARFLREYV---RERKALSLLEAIRKCTLMPAQILEDSVPA 439 (509)
T ss_pred c-eEecCCccccccccccccccccccccCCCCCchhhcchHHHHHHHH---hhcccCCHHHHHHHHHHHHHHHhcccccc
Confidence 4 899998653200 0 11111111111111000000 011249999999999999999999
Q ss_pred CCCcccccccCCccCEEEEcCCCCCCC-CcCCcccceecccCCCCeeEEEEccEEEEECCeee-eccHHHHHHH
Q 012333 387 WDNDIGSLEAGKKADMVVVDPFSWPMV-PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL-LLMRGRLFQL 458 (466)
Q Consensus 387 l~~~~G~i~~G~~ADlvv~d~~~~~~~-~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~-~~~~~~~~~~ 458 (466)
+. .+|+|++|+.|||+|||++.+... .+.++.. ....|+.||++|++||++|+++ +...|+++++
T Consensus 440 l~-~~G~i~~G~~ADlvv~D~~~~~~~~~~~~~~~------~~~gi~~v~v~G~~v~~~g~~~~~~~~G~~lr~ 506 (509)
T PRK09061 440 MR-RKGRLQAGADADIVVFDPETITDRATFEDPNR------PSEGVRHVLVNGVPVVSNGELVRDARPGRPVRR 506 (509)
T ss_pred cc-CCEeeCCCCCcCEEEEchhhccccccccccCC------CCCCceEEEECCEEEEECCEecCCCCCCeEecC
Confidence 84 469999999999999999853322 2223211 1246999999999999999974 7888988764
No 56
>PRK06846 putative deaminase; Validated
Probab=100.00 E-value=8e-32 Score=260.75 Aligned_cols=355 Identities=15% Similarity=0.131 Sum_probs=226.2
Q ss_pred eceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc-C---CCCchHhhhhccccc
Q 012333 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA-D---DVDLMTWLHDRIWPY 114 (466)
Q Consensus 39 ~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~-~---~~~~~~~~~~~~~~~ 114 (466)
...+|.|++|+|++|++.... +..+.++||++|++|+|||||+|+|+.+...++.. . .....+|+....+..
T Consensus 30 ~~~~i~i~~g~I~~i~~~~~~----~~~~~~~id~~g~~v~Pg~iD~H~H~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~ 105 (410)
T PRK06846 30 ALCTLEIQDGKIVAIRPNKQV----PDATLPTYDANGLLMLPAFREMHIHLDKTYYGGPWKACRPAKTIQDRIELEQKEL 105 (410)
T ss_pred eeEEEEEECCEEEEeecCCCC----CCCCCceEeCCCCEEecCEEeeeecccchhhccchhhcCCcccHHHHHhhhhhhH
Confidence 356999999999999975321 11246799999999999999999999876544422 1 133466664322222
Q ss_pred cCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-------HHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChH
Q 012333 115 ESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-------VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTD 187 (466)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (466)
.... +.........+..++.+|+|+++++.... ...+.+...+............ ...+.. .
T Consensus 106 ~~~~--~~~~~~a~~~l~~~~~~Gtt~~r~~v~~~~~~~~~~~~a~~e~l~e~~~~v~~~~~a~-~~~g~~----~---- 174 (410)
T PRK06846 106 PELL--PTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYKDGFTYEIVAF-PQHGLL----R---- 174 (410)
T ss_pred HHhH--HHHHHHHHHHHHHHHhCCccEEEEEEeeCcccccchHHHHHHHHHHhhCcceEEEEec-cCcccC----C----
Confidence 1111 11112222455667788999977654211 1222233333222111111111 011110 0
Q ss_pred HHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHH
Q 012333 188 DCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFL 267 (466)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (466)
....+.+++..+.+...++ .+.+......+++.+.+++++|+++|+++++|+.+.......... ...+.+
T Consensus 175 ---~~~~~lL~~al~~Ga~~i~-gl~p~~~~~~~~~~l~~~~~lA~~~g~~v~~Hv~e~~~~~~~~~~------~~~~~~ 244 (410)
T PRK06846 175 ---SNSEPLMREAMKMGAHLVG-GVDPASVDGAIEKSLDTMFQIAVDFNKGVDIHLHDTGPLGVATIK------YLVETT 244 (410)
T ss_pred ---ccHHHHHHHHHHcCCCEEe-CCCCccCCcCHHHHHHHHHHHHHHhCCCcEEEECCCCChhHHHHH------HHHHHH
Confidence 0112445555555444332 234444556778899999999999999999999876654332221 145666
Q ss_pred hhhccCCCCeeEEEeecC---ChhhH----HHHHhcCCeEEECccchhhccCCccHHHHHHcCCcEEEccCCCC----CC
Q 012333 268 DKIEFLQNNLLSAHTVWV---NHTEI----GLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP----SN 336 (466)
Q Consensus 268 ~~~~~~~~~~~~~H~~~~---~~~~~----~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~gi~~~~gsD~~~----~~ 336 (466)
...++.+ +..+.|+.++ +++++ +++++.|+.++.++. ...+.+|+++++++|+++++|||++. ..
T Consensus 245 ~~~gl~~-~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~~~---~~~g~~p~~~l~~~Gv~v~lGtD~~~~~~~p~ 320 (410)
T PRK06846 245 EEAQWKG-KVTISHAFALGDLNEEEVEELAERLAAQGISITSTVP---IGRLHMPIPLLHDKGVKVSLGTDSVIDHWSPF 320 (410)
T ss_pred HHhCCCC-CEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEeCC---CCCCCCCHHHHHhCCCeEEEecCCCCCCCcCC
Confidence 6677555 8999999975 56664 468999998887644 12567999999999999999999752 22
Q ss_pred CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcC
Q 012333 337 NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH 416 (466)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~ 416 (466)
...++++.++......+.. .. -++.++++++|.+ |..+++++.+|+|++||.|||||+|.+.. .+
T Consensus 321 ~~~d~~~~~~~~~~~~~~~--------~~--~~~~~~l~~~T~~-a~~l~~~~~~G~l~~G~~ADlvlld~~~~----~~ 385 (410)
T PRK06846 321 GTGDMLEKANLLAELYRWS--------DE--RSLSRSLALATGG-VLPLNDEGERVWPKVGDEASFVLVDASCS----AE 385 (410)
T ss_pred CCCCHHHHHHHHHHHhcCC--------CH--HHHHHHHHHHcCC-ccccccCCCccCCCCCCcccEEEEeCCCh----HH
Confidence 3467999888765544311 11 2456899999988 45688777789999999999999998721 11
Q ss_pred CcccceecccCCCCeeEEEEccEEEEEC
Q 012333 417 DRITSLVYCMRTENVVSVMCNGQWVMKN 444 (466)
Q Consensus 417 ~~~~~~~~~~~~~~v~~v~v~G~~v~~~ 444 (466)
. + .....+..||++|++||..
T Consensus 386 ~-~------~~~~~v~~v~~~G~~v~~~ 406 (410)
T PRK06846 386 A-V------ARQSPRTAVFHKGQLVAGS 406 (410)
T ss_pred H-H------HhcCCceEEEECCEEEeee
Confidence 1 1 1236899999999999984
No 57
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=3.4e-31 Score=255.05 Aligned_cols=333 Identities=18% Similarity=0.199 Sum_probs=207.2
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhh-----hhccCCCeEEeCCCcEEeecccccccCCcc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-----QFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~-----~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~ 91 (466)
+.+|++|+|++|++. .. +..++|+|+||+|++|++...... .....++++||++|++|+|||||+|+|+..
T Consensus 65 ~~mDlVI~Na~Vvd~---~g-i~~adI~I~dGrI~~IG~~~~p~~~~~v~~~~~~~~eVIDa~G~iV~PG~ID~HvH~~~ 140 (568)
T PRK13207 65 GAVDTVITNALILDH---WG-IVKADIGIKDGRIVAIGKAGNPDIQDGVDIIIGPGTEVIAGEGLIVTAGGIDTHIHFIC 140 (568)
T ss_pred ccCCEEEECeEEECC---CC-eEEEEEEEECCEEEEEeCCCCccccccccccCCCCCeEEECCCCEEEeCeEECccCCcc
Confidence 467999999999953 22 346799999999999997532110 011136789999999999999999999821
Q ss_pred cccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC---------------HHHHHHH
Q 012333 92 QLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---------------VSEMAKA 156 (466)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~---------------~~~~~~~ 156 (466)
+.. .+.++.+||||+++++... ...+.+.
T Consensus 141 ----------------------------P~~--------~~aALagGVTTVi~mg~gP~~gt~~~t~tpG~~~l~~~l~~ 184 (568)
T PRK13207 141 ----------------------------PQQ--------IEEALASGVTTMIGGGTGPATGTNATTCTPGPWHIHRMLQA 184 (568)
T ss_pred ----------------------------ccH--------HHHHHcCCCCEEEcCCcCCccCCcccccccchHHHHHHHHH
Confidence 111 2457899999999974211 1111111
Q ss_pred HHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcC
Q 012333 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (466)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 236 (466)
.....+...+ . +.+ ...... .+++..+.+...++.+ ..+..+++.+.++++.|++++
T Consensus 185 a~~~pin~g~----~--g~g---------~~~~~~----~L~e~i~aGA~gfKi~----~d~g~t~~~l~~aL~~A~~~g 241 (568)
T PRK13207 185 ADAFPMNIGF----L--GKG---------NASLPE----ALEEQIEAGAIGLKLH----EDWGATPAAIDNCLSVADEYD 241 (568)
T ss_pred hhcCCceEEE----E--cCC---------CcccHH----HHHHHHHcCCCEEeec----CCCCCCHHHHHHHHHHHHHhC
Confidence 1111111110 0 000 011112 2223333444444432 223458889999999999999
Q ss_pred CccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeec-------CChhhHHHHHhcCCeEE-ECccchh
Q 012333 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW-------VNHTEIGLLSRAGVKVS-HCPASAM 308 (466)
Q Consensus 237 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~-------~~~~~~~~~~~~g~~~~-~~p~~~~ 308 (466)
.++.+|+....... ..+. .+.....+ ..|..| ..++.++.+...++... ++|+--+
T Consensus 242 v~V~iHa~tlne~G------------~~e~--t~~a~~g~--~iH~~H~egaggghapdii~~~~~~~v~p~st~pt~p~ 305 (568)
T PRK13207 242 VQVAIHTDTLNESG------------FVED--TIAAFKGR--TIHTFHTEGAGGGHAPDIIKVAGEPNVLPSSTNPTRPY 305 (568)
T ss_pred CEEEEeCCCcccch------------HHHH--HHHhcCCC--EEEEEeecCCCcCCchHHHHHhhcCCCccCCCCCCCCC
Confidence 99999996533221 1111 11111111 344444 34677788877776533 3443111
Q ss_pred ---------------------------------hccCCccHHHHHHcCCcEEEccCCCCCCC-CCCHHHHHHHHHHHhcc
Q 012333 309 ---------------------------------RMLGFAPIKEMLHADICVSLGTDGAPSNN-RMSIVDEMYLASLINKG 354 (466)
Q Consensus 309 ---------------------------------~~~~~~~~~~~~~~gi~~~~gsD~~~~~~-~~~~~~~~~~~~~~~~~ 354 (466)
|...+..-.-+++.|+.++++||++..+. ...++..++.+......
T Consensus 306 ~~~~~~e~~~m~m~~h~l~~~~~~d~~~a~srir~~t~~ae~~l~d~Ga~~~~~SD~p~~~~~~~~~~r~~q~A~~r~~~ 385 (568)
T PRK13207 306 TVNTIDEHLDMLMVCHHLDPSIPEDVAFAESRIRRETIAAEDILHDLGAISMISSDSQAMGRVGEVIIRTWQTAHKMKVQ 385 (568)
T ss_pred ccCchhhhcCeEEeecCCCCCCcchhhhhhhhccceeecccchhhhCCCEEEecCCcccccccccchhHHHHHHHHHHHc
Confidence 11122233457899999999999986532 24677888877766543
Q ss_pred cccc--cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCee
Q 012333 355 REVF--ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVV 432 (466)
Q Consensus 355 ~~~~--~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~ 432 (466)
+... ..++...+.+++. |+++|.|||+++|+++.+|+|++||.||||||+.+.+. .++.
T Consensus 386 ~G~~~~d~~~~~n~ri~~~--l~~~T~npA~alG~~~~vGsIe~Gk~ADlVvld~d~f~-----------------~~~~ 446 (568)
T PRK13207 386 RGPLPGDSGRNDNFRVKRY--IAKYTINPAIAHGISHEVGSVEVGKLADLVLWKPAFFG-----------------VKPE 446 (568)
T ss_pred cCCCCcccccCccchHHHH--HHHHhHHHHHHcCCCcCccccCCCCcCCEEEECchhcC-----------------CCce
Confidence 2222 1122233345444 99999999999999988999999999999999998432 4688
Q ss_pred EEEEccEEEEEC-Cee
Q 012333 433 SVMCNGQWVMKN-KKI 447 (466)
Q Consensus 433 ~v~v~G~~v~~~-g~~ 447 (466)
.||++|+++|.. |..
T Consensus 447 ~ti~~G~iv~~~~gd~ 462 (568)
T PRK13207 447 LVLKGGMIAWAPMGDP 462 (568)
T ss_pred EEEECCEEEEecCCCc
Confidence 999999999987 543
No 58
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=100.00 E-value=2.4e-31 Score=253.28 Aligned_cols=329 Identities=20% Similarity=0.202 Sum_probs=199.7
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
|++++|+|++|++.++ .. .++|.|+||||++|++... ...++||++|++|+|||||+|+|...
T Consensus 1 ~~~~~i~~~~v~~~~~---~~-~~~i~i~~g~I~~i~~~~~-------~~~~~iDa~g~~v~PG~ID~H~h~~~------ 63 (383)
T PRK15446 1 MMEMILSNARLVLPDE---VV-DGSLLIEDGRIAAIDPGAS-------ALPGAIDAEGDYLLPGLVDLHTDNLE------ 63 (383)
T ss_pred CccEEEECcEEEcCCC---ce-eeeEEEECCEEEEecCCCC-------CCCceEeCCCCEEEeCeEEcccCCcc------
Confidence 4689999999997442 22 6799999999999997432 14478999999999999999996531
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-c--C-----HH----HHHHHHH--HhCCe
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-Q--H-----VS----EMAKAVE--LLGLR 163 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-~--~-----~~----~~~~~~~--~~g~~ 163 (466)
..+..|.. ..| ...+ .......+++.+||||+.++.. . . .. .+.+... ....+
T Consensus 64 ---~~~~p~~~-~~~------~~~~---~~~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (383)
T PRK15446 64 ---KHLAPRPG-VDW------PADA---ALAAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARARGL 130 (383)
T ss_pred ---cccCCCCC-Ccc------chHH---HHHHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhcCc
Confidence 00011100 001 1112 2223447789999999999631 1 1 12 1112222 11111
Q ss_pred EEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeec----------------------------
Q 012333 164 ACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIR---------------------------- 215 (466)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------------------------- 215 (466)
. ..+.+.... ... .....+++ +..+.+.+.-.++.++...
T Consensus 131 ~-----~vD~~~h~~--~~~-~~~~~~~~----l~~~~~~g~~~~k~fm~~~p~~~~~~~~~~~~~~~~~~~g~~~~e~~ 198 (383)
T PRK15446 131 L-----RADHRLHLR--CEL-TNPDALEL----FEALLAHPRVDLVSLMDHTPGQRQFRDLEKYREYYAGKYGLSDEEFD 198 (383)
T ss_pred h-----hccceeEEE--EEe-cCcchHHH----HHHHhcCCCcCEEEEeCCCCccccccCHHHHHHHHHhhcCCCHHHHH
Confidence 1 111110000 000 00001111 1111122222222222111
Q ss_pred --------ccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh
Q 012333 216 --------QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 287 (466)
Q Consensus 216 --------~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 287 (466)
.+...+.+.++.+++.|+++|+++.+|+.+......... . .+- ..+.| ..+.
T Consensus 199 ~~~~~~~~~~~~~~~e~i~~~v~~A~~~g~~v~sH~~~~~~~i~~a~--------------~---~Gv-~~~e~--~~~~ 258 (383)
T PRK15446 199 AFVEERIALSARYAPPNRRAIAALARARGIPLASHDDDTPEHVAEAH--------------A---LGV-AIAEF--PTTL 258 (383)
T ss_pred HHHHHHHHhHhhcCHHHHHHHHHHHHHCCCceeecCCCCHHHHHHHH--------------H---cCC-ceeeC--CCcH
Confidence 122246778899999999999999999865433221111 1 111 11223 3467
Q ss_pred hhHHHHHhcCCeEEECccchhhc---cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCC
Q 012333 288 TEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTD 364 (466)
Q Consensus 288 ~~~~~~~~~g~~~~~~p~~~~~~---~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (466)
+.++.+++.|+.+..++...++. .+..+++.+++.|+++++|||+.+. +++..+.... .
T Consensus 259 e~~~~~~~~g~~v~~~~p~~~r~~~~~~~~~~~~~~~~Gv~~~lgSD~~p~----~~~~~~~~~~--~------------ 320 (383)
T PRK15446 259 EAARAARALGMSVLMGAPNVVRGGSHSGNVSALDLAAAGLLDILSSDYYPA----SLLDAAFRLA--D------------ 320 (383)
T ss_pred HHHHHHHHCCCEEEeCCcccccCCcccchHhHHHHHHCCCcEEEEcCCChh----hHHHHHHHHH--H------------
Confidence 88888888999888776544443 3456788999999999999999653 2333222111 1
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEEC
Q 012333 365 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 444 (466)
Q Consensus 365 ~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~ 444 (466)
..++|++++++++|.|||+++|+++ +|+|++|++|||+|+|.+ +. ...+..||++|++||+.
T Consensus 321 ~~gls~~~al~~~T~npA~~lgl~~-~G~I~~G~~ADlvv~d~~-----~~------------~~~v~~v~~~G~~v~~~ 382 (383)
T PRK15446 321 DGGLDLPQAVALVTANPARAAGLDD-RGEIAPGKRADLVRVRRA-----GG------------LPVVRAVWRGGRRVFLA 382 (383)
T ss_pred hcCCCHHHHHHHHhHHHHHHcCCCC-CcCcCCCCcCCEEEEcCC-----CC------------CcchheEEECCEEEEeC
Confidence 1259999999999999999999965 499999999999999998 11 13788999999999874
No 59
>PRK09237 dihydroorotase; Provisional
Probab=100.00 E-value=5.9e-31 Score=252.75 Aligned_cols=353 Identities=17% Similarity=0.169 Sum_probs=215.7
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|+++.. ......+|+|++|+|++|++..+. + .+.++||++|++|+|||||+|+|+.....
T Consensus 1 ~~i~~~~v~d~~~--~~~~~~~v~i~~g~I~~v~~~~~~----~-~~~~~iD~~g~~v~PG~iD~H~H~~~~~~------ 67 (380)
T PRK09237 1 LLLRGGRVIDPAN--GIDGVIDIAIEDGKIAAVAGDIDG----S-QAKKVIDLSGLYVSPGWIDLHVHVYPGST------ 67 (380)
T ss_pred CEEEeEEEECCCC--CcccceEEEEECCEEEEecCCCCC----C-CCCeEEECCCCEEecCEEEeeecCCCCCC------
Confidence 4799999996443 234567999999999999875332 1 25689999999999999999999843110
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc---CHHHHHHHHHHh-CCeEEeecccccCCCC
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELL-GLRACLVQSTMDCGEG 176 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~---~~~~~~~~~~~~-g~~~~~~~~~~~~~~~ 176 (466)
.... .....++.+||||+++++.. ....+.+..... +.+......+...+.-
T Consensus 68 ---------------~~~~---------~~~~~~~~~G~Ttv~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~ 123 (380)
T PRK09237 68 ---------------PYGD---------EPDEVGVRSGVTTVVDAGSAGADNFDDFRKLTIEASKTRVLAFLNISRIGLL 123 (380)
T ss_pred ---------------ccCC---------CHHHHHHhCCcCEEEECCCCCCCCHHHHHHHHHhhhCcEEEEEEeeeccccc
Confidence 0000 11134789999999997643 344445544444 5544332211111111
Q ss_pred CCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhh
Q 012333 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (466)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (466)
.+...........+...+.+.++.+. -..++..+..........+.++....++++.++++.+|+.+.......
T Consensus 124 -~~~~~~~~~~~~~~~~~~~~~~~~~~-v~glk~~~~~~v~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~---- 197 (380)
T PRK09237 124 -AQDELADLEDIDADAVAEAVKRNPDF-IVGIKARMSSSVVGDNGIEPLELAKAIAAEANLPLMVHIGNPPPSLEE---- 197 (380)
T ss_pred -ccchhcCHhHCCHHHHHHHHHhCcCc-EEEEEEEEecccccccCCchHHHHHHHHHhcCCCEEEEcCCCCCCHHH----
Confidence 11111111111223334444433221 112232222211111111233334444568899999999764432221
Q ss_pred cCCCCchHHHHhhhccCCCCeeEEEeecCCh-----------hhHHHHHhcCCeEEECccchhhccCCccHHHHHHcCC-
Q 012333 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI- 324 (466)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-----------~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~gi- 324 (466)
.+. ++.....+.|+...++ +....+.++|+.+.+...+.. ........++++|+
T Consensus 198 ---------l~~---~l~~g~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~~G~~~~ig~g~~~--~~~~~~~~l~~~g~~ 263 (380)
T PRK09237 198 ---------ILE---LLRPGDILTHCFNGKPNRILDEDGELRPSVLEALERGVRLDVGHGTAS--FSFKVAEAAIAAGIL 263 (380)
T ss_pred ---------HHh---hccCCCEEEecCCCCCCCccCCCCcchHHHHHHHHCCEEEEecCCCCc--ccHHHHHHHHHCCCC
Confidence 111 1222346789887766 567777888988876522210 12234567778886
Q ss_pred cEEEccCCCCCC----CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCcc
Q 012333 325 CVSLGTDGAPSN----NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKA 400 (466)
Q Consensus 325 ~~~~gsD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~A 400 (466)
+.+++||..+.. +.+.+...+... .. .+++++++++++|.|||+++|+ +++|+|++|+.|
T Consensus 264 ~~~l~tD~~~~~~~~~~~~~l~~~~~~~--~~-------------~g~~~~~al~~aT~n~A~~lgl-~~~G~l~~G~~A 327 (380)
T PRK09237 264 PDTISTDIYCRNRINGPVYSLATVMSKF--LA-------------LGMPLEEVIAAVTKNAADALRL-PELGRLQVGSDA 327 (380)
T ss_pred ceEEECCCCCCCcccchHhHHHHHHHHH--HH-------------hCCCHHHHHHHHHHHHHHHcCC-CCCCcCCCCCcC
Confidence 569999976532 111222322221 11 2599999999999999999999 568999999999
Q ss_pred CEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCee
Q 012333 401 DMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKI 447 (466)
Q Consensus 401 Dlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~ 447 (466)
||++++.+... .+..|+...+++......+..||++||+||.+-..
T Consensus 328 Dlvv~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~v~G~~~~~~~~~ 373 (380)
T PRK09237 328 DLTLFTLKDGP-FTLTDSEGDSLIGERLLTPLATVRGGKVVLTEQGS 373 (380)
T ss_pred CEEEEeCCCCC-ccccCCCCCEEEecCCCcceEEEECCEEEEccCcc
Confidence 99999987544 36778888888888889999999999999987543
No 60
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=100.00 E-value=1e-31 Score=259.17 Aligned_cols=351 Identities=15% Similarity=0.140 Sum_probs=205.2
Q ss_pred CCCCCCCCCCcccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhh--hhh---ccCCCeEEeCCCcEEee
Q 012333 6 SGGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--QQF---SQMADQIIDLQSQILLP 80 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~--~~~---~~~~~~~iD~~G~~v~P 80 (466)
++|++..-...+.+|++|+|++|++. .+ +..++|.|+||+|++|++..+.. ..+ ...++++||++|++|+|
T Consensus 53 ~~~~~~~~~~~~~MDlVIkNg~VID~--~g--i~kaDI~IkDGrIaaIG~~~~p~~~~~v~~~~~~~tEVIDa~GkIV~P 128 (567)
T TIGR01792 53 MGQNATLTRNAGVLDLVITNALILDW--TG--IYKADIGIKNGRIVGIGKAGNPDTMDGVDMIVGASTEAISGEGKIVTA 128 (567)
T ss_pred CCCCCCCCCccccCcEEEECeEEECC--CC--eEEEEEEEECCEEEEEcCCCcccccccccccCCCCCeEEECCCCEEEE
Confidence 45533333334567999999999963 22 45689999999999999754221 000 01356899999999999
Q ss_pred cccccccCCcccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc------------
Q 012333 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------------ 148 (466)
Q Consensus 81 G~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~------------ 148 (466)
||||+|+|+. .+. ..+.++..||||+.+.|..
T Consensus 129 GlIDtHvH~~----------------------------~P~--------~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~ 172 (567)
T TIGR01792 129 GGIDTHVHYI----------------------------SPQ--------QVQAALDNGITTLIGGGTGPADGTNATTCTP 172 (567)
T ss_pred CeEEeecCCC----------------------------Ccc--------HHHHHHhCceEEEecCCCccccCCCCccccc
Confidence 9999999982 111 1255789999999995431
Q ss_pred ---CHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHH
Q 012333 149 ---HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLL 225 (466)
Q Consensus 149 ---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l 225 (466)
....+.++....+++..+. +.+. ...... +.+..+.+. ..+..+..+..+++.+
T Consensus 173 ~~~~~~~~l~aa~~~~in~g~~------g~g~---------~~~~~~----L~e~i~aGa----~gfK~h~~y~~s~e~L 229 (567)
T TIGR01792 173 GPWYLHRMLQAADGLPINFGFT------GKGS---------GSGPAA----LIEQIEAGA----CGLKVHEDWGATPAAI 229 (567)
T ss_pred chhhHHHHHHHhccCCccEEEE------eCCc---------cchHHH----HHHHHHcCC----cEEEeCCCCCCCHHHH
Confidence 1122334444445543221 0010 001111 222222222 2356677778999999
Q ss_pred HHHHHHHHHcCCccceeccCCcch---hHHHHhhcCCCCchHHHHhhhccCCCC-----------eeEEEeecC-ChhhH
Q 012333 226 LETRDMAREFKTGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQNN-----------LLSAHTVWV-NHTEI 290 (466)
Q Consensus 226 ~~~~~~a~~~~~~v~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~H~~~~-~~~~~ 290 (466)
.++++.|++++.++++|+ +...+ .+...... +..+++.++..+.-..+ .++...+.- .|...
T Consensus 230 ~~al~~A~e~gv~V~iH~-ET~~E~g~ve~t~~a~--g~rpIh~~H~~G~g~ghapdi~~~~~~~~~~~~st~pt~p~~~ 306 (567)
T TIGR01792 230 DNALSVADEYDVQVAVHT-DTLNESGFVEDTIAAF--KGRTIHTYHTEGAGGGHAPDIIVVVGYNNILPSSTNPTLPYTV 306 (567)
T ss_pred HHHHHHHHHcCCEEEEeC-CCcccchHHHHHHHHH--CCCcchhHhhcCCCCCcHHHHHHHcCCCCcccCCCCCCCCCcc
Confidence 999999999999999999 55555 33232222 33355555555432211 111111000 01111
Q ss_pred HHHHhcCCeEEECccch-------------hhccCCccHHHHHHcCCcEEEccCCCCCCCCC----CHHHHHHHHHHHhc
Q 012333 291 GLLSRAGVKVSHCPASA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRM----SIVDEMYLASLINK 353 (466)
Q Consensus 291 ~~~~~~g~~~~~~p~~~-------------~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~----~~~~~~~~~~~~~~ 353 (466)
..+.+.--.+.+|..-+ .|...+..-..+.+.|+..+++||+++.+.-. ..|..-.. ..+
T Consensus 307 ~~~~e~~~m~~~~h~l~~~~~~d~~~a~~r~r~~t~~ae~~l~d~G~~~~~~sDs~~mgr~~~~~~r~~q~a~k---~~~ 383 (567)
T TIGR01792 307 NTIDEHLDMLMVCHHLNPKIPEDVAFAESRIRKETIAAEDVLQDMGAISMISSDSQAMGRIGEVVTRCWQTADK---MKK 383 (567)
T ss_pred CchhhhcCeEEEeccCCCCCcccchhhhhhccceeccccchhhhCCcEEEecCCchhhCcccceeechHHHHHH---HHH
Confidence 11111111122222211 12233344456789999999999997543211 22322222 112
Q ss_pred cccccc--CCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCe
Q 012333 354 GREVFA--NGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENV 431 (466)
Q Consensus 354 ~~~~~~--~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v 431 (466)
.++... ..+...+.++.+ |+++|.|||+++|+++++|+|++||.||||||+.+.|. .++
T Consensus 384 ~~g~~~~~~~~~~~~rl~r~--L~~yT~n~A~a~g~~~~~GsLe~Gk~ADlVv~~~d~f~-----------------~~p 444 (567)
T TIGR01792 384 QRGPLPGDSPGNDNNRVKRY--VAKYTINPAITHGISDYIGSIEVGKLADLVLWEPAFFG-----------------VKP 444 (567)
T ss_pred hcCCCcccccCChhhhHHHH--HHHHhHHHHHHcCcccCceeeCCCCccCEEEEcCcccC-----------------CCh
Confidence 121111 111122345444 99999999999999999999999999999999998443 367
Q ss_pred eEEEEccEEEEEC
Q 012333 432 VSVMCNGQWVMKN 444 (466)
Q Consensus 432 ~~v~v~G~~v~~~ 444 (466)
..||++|+++|..
T Consensus 445 ~~v~~~G~i~~~~ 457 (567)
T TIGR01792 445 DMVLKGGLIAWAI 457 (567)
T ss_pred heEEECCEEEEEe
Confidence 8999999999875
No 61
>PRK13985 ureB urease subunit beta; Provisional
Probab=100.00 E-value=3.6e-31 Score=251.66 Aligned_cols=334 Identities=18% Similarity=0.186 Sum_probs=196.4
Q ss_pred CCcccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhh-------hhccCCCeEEeCCCcEEeecccccc
Q 012333 14 SLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQILLPGFVNTH 86 (466)
Q Consensus 14 ~~~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~-------~~~~~~~~~iD~~G~~v~PG~ID~H 86 (466)
...+..|++|+|++|++. . . +..++|.|+||+|++|++..+... .....++++||++|++|+|||||+|
T Consensus 60 ~~~~~~DlVI~Na~IiD~--~-g-i~kaDI~IkdGrIaaIG~~gn~~~~~~v~~~~~ig~~tevIDa~G~iV~PG~ID~H 135 (568)
T PRK13985 60 PSKEELDLIITNALIIDY--T-G-IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTH 135 (568)
T ss_pred CCCCcCCEEEECeEEECC--C-C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEECCCCEEEeCEEEee
Confidence 345578999999999953 2 2 345799999999999998542110 0012367899999999999999999
Q ss_pred cCCcccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC---------------HH
Q 012333 87 VHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---------------VS 151 (466)
Q Consensus 87 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~---------------~~ 151 (466)
+|+.. +. .+ ..++.+||||+.++|... ..
T Consensus 136 vH~~~----------------------------P~-~~-------~~AlagGVTTvI~~G~gP~~~T~p~~~tpg~~~i~ 179 (568)
T PRK13985 136 IHFIS----------------------------PQ-QI-------PTAFASGVTTMIGGGTGPADGTNATTITPGRRNLK 179 (568)
T ss_pred CCCCC----------------------------cc-HH-------HHHhcCceEEEEccCcCCCCCCCCcCCCCcHHHHH
Confidence 99821 11 11 237899999999853111 12
Q ss_pred HHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHH
Q 012333 152 EMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDM 231 (466)
Q Consensus 152 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~ 231 (466)
.+.+......+...+ . +.+.. . ... .+.+..+.+. +. +..+..+..++..+.++++.
T Consensus 180 ~ml~~a~~~pvn~gf----~--gkG~~------~---~l~----eL~el~~aGA--~G--fK~~ed~g~t~~~I~~aL~v 236 (568)
T PRK13985 180 WMLRAAEEYSMNLGF----L--GKGNS------S---NDA----SLADQIEAGA--IG--FKIHEDWGTTPSAINHALDV 236 (568)
T ss_pred HHHHHhhccCccEEE----e--cCCcc------C---CHH----HHHHHHHcCC--EE--EEECCccCCCHHHHHHHHHH
Confidence 223333222222111 0 11110 0 112 1222223222 22 33344455788899999999
Q ss_pred HHHcCCccceeccCCcchhHHHHhhcCCCCchHH-HHhhhccCCCCeeEEEeecCC----hhhHHHHHhcCCe-EEECcc
Q 012333 232 AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAGVK-VSHCPA 305 (466)
Q Consensus 232 a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~g~~-~~~~p~ 305 (466)
+++++.++.+|+....... ..+ .+..+ .+......|..... ++.++.....++. .+++|+
T Consensus 237 A~~~dv~V~iHtdtlne~g------------~~E~t~aa~--~gr~iH~~H~egaggghapdi~~~~~~~nvlp~stnpt 302 (568)
T PRK13985 237 ADKYDVQVAIHTDTLNEAG------------CVEDTMAAI--AGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPT 302 (568)
T ss_pred HHHcCCEEEEeCCCCCCch------------hhHHHHHHh--cCCeEEEEeccCCCccchhhHHHHcCCCCcccCCCCCC
Confidence 9999999999997643221 111 11111 12222223322111 2223332222222 122222
Q ss_pred ch---------------------------------hhccCCccHHHHHHcCCcEEEccCCCCCCCCC----CHHHHHHHH
Q 012333 306 SA---------------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRM----SIVDEMYLA 348 (466)
Q Consensus 306 ~~---------------------------------~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~----~~~~~~~~~ 348 (466)
-- .|...+..-.-+.+.|+...++||+...+.-. -.|+.-...
T Consensus 303 ~p~t~nt~~e~~dm~m~~h~l~~~~~ed~afa~srir~~tiaaed~l~d~G~~s~~~SDs~~mgr~ge~~~r~~q~a~k~ 382 (568)
T PRK13985 303 IPFTVNTEAEHMDMLMVCHHLDKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGEVITRTWQTADKN 382 (568)
T ss_pred CCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccccccccCchhhhCCcEEEEeccchhhCcccceeeehHHHHHHH
Confidence 11 11122233345788999999999998554321 233332221
Q ss_pred HHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCC
Q 012333 349 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRT 428 (466)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~ 428 (466)
.+.+............++++++|+++|.|||+++|+++++|+|++||.||||||+.+.+.
T Consensus 383 ---~~~~g~l~~~~~~~dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~ADlVv~d~d~f~----------------- 442 (568)
T PRK13985 383 ---KKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFG----------------- 442 (568)
T ss_pred ---HHhcCCCCCccccccccCHHHHHHHHhHHHHHHcCcccCceeECCCCccCEEEEcCccCC-----------------
Confidence 111111111111235699999999999999999999999999999999999999998443
Q ss_pred CCeeEEEEccEEEEEC
Q 012333 429 ENVVSVMCNGQWVMKN 444 (466)
Q Consensus 429 ~~v~~v~v~G~~v~~~ 444 (466)
..+..||++|+++|..
T Consensus 443 ~~pe~vi~~G~iv~~~ 458 (568)
T PRK13985 443 VKPNMIIKGGFIALSQ 458 (568)
T ss_pred CChheEEECCEEEEcc
Confidence 4778999999999985
No 62
>PRK07627 dihydroorotase; Provisional
Probab=100.00 E-value=4e-31 Score=254.96 Aligned_cols=359 Identities=15% Similarity=0.180 Sum_probs=205.4
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
+|++|+|++|+++.+ .....++|+|+||+|++|++... +..++++||++|++|+|||||+|+|+...
T Consensus 1 m~~~i~~~~v~~~~~--~~~~~~~I~I~~g~I~~i~~~~~-----~~~~~~~iDa~g~~vlPG~iD~H~H~~~~------ 67 (425)
T PRK07627 1 MKIHIKGGRLIDPAA--GTDRQADLYVAAGKIAAIGQAPA-----GFNADKTIDASGLIVCPGLVDLSARLREP------ 67 (425)
T ss_pred CeEEEEeeEEECCCC--CccceeEEEEECCEEEEecCCCc-----CCCCCeEEECCCCEEeccEEeccccccCC------
Confidence 378999999996543 23456799999999999987421 11367899999999999999999998321
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCH----HHHHHHH----HH-hCCeEEeecc
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV----SEMAKAV----EL-LGLRACLVQS 169 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~----~~~~~~~----~~-~g~~~~~~~~ 169 (466)
.....+ ......+.++.+||||+++++.... ....+.. .. .+...+....
T Consensus 68 ------------------g~~~~e---~~~t~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (425)
T PRK07627 68 ------------------GYEYKA---TLESEMAAAVAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQAHVYPLGA 126 (425)
T ss_pred ------------------CccccC---cHHHHHHHHHhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCceeEEEeCe
Confidence 000000 1122346689999999999864311 1111111 11 1222221111
Q ss_pred cccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcch
Q 012333 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (466)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (466)
... + . ....+.+. ..+.+. .+..+- ....+..+...+.+.++.++..+.++.+|+.+....
T Consensus 127 ~~~-g--~--------~~~~~~~i----~~l~~~---G~~~fk-~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~~~ 187 (425)
T PRK07627 127 LTV-G--L--------KGEVLTEM----VELTEA---GCVGFS-QANVPVVDTQVLLRALQYASTFGFTVWLRPLDAFLG 187 (425)
T ss_pred EEc-C--C--------CccCHHHH----HHHHhC---CEEEEE-cCCcccCCHHHHHHHHHHHHhcCCEEEEecCChhhh
Confidence 110 1 0 00111222 222222 222211 112234567788999999999999999999764321
Q ss_pred hH---------HHHhhcCCCC-----chHHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCe--EEECccchhhc--
Q 012333 250 NQ---------VVMDTRKVDH-----GTVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCPASAMRM-- 310 (466)
Q Consensus 250 ~~---------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~--~~~~p~~~~~~-- 310 (466)
.. ......+... .....+...+..+.+..+.|...- +-+.++.+++.|.. +.+||++-...
T Consensus 188 ~~~~~~~g~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~ 267 (425)
T PRK07627 188 RGGVAASGAVASRLGLSGVPVAAETIALHTIFELMRVTGARVHLARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDV 267 (425)
T ss_pred hCCCcCCCHhHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHCCCCeEEEeccchheEeHh
Confidence 10 0000000000 011123333334555656665431 12445555666644 56788743210
Q ss_pred ------------------cCCccHHHHHHcCCcEEEccCCCCCCCC--C-CHHH--------HHHHHHHHhcccccccCC
Q 012333 311 ------------------LGFAPIKEMLHADICVSLGTDGAPSNNR--M-SIVD--------EMYLASLINKGREVFANG 361 (466)
Q Consensus 311 ------------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~--~-~~~~--------~~~~~~~~~~~~~~~~~~ 361 (466)
.....+++.+++|...+++|||.|.... . .++. +........
T Consensus 268 ~~~~~~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~SDHaP~~~~~k~~~~~~~~~G~~g~e~~~pl~~~--------- 338 (425)
T PRK07627 268 DIGYFDSQFRLDPPLRSQRDREAIRAALADGTIDAICSDHTPVDDDEKLLPFAEATPGATGLELLLPLTLK--------- 338 (425)
T ss_pred HHhccCCceEEeCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCCHHHccCCHhhCCCCceeHHHHHHHHHH---------
Confidence 1123466788999999999999776411 0 1111 001111111
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCC-------cCCcccceecccCCCCeeE
Q 012333 362 TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVP-------VHDRITSLVYCMRTENVVS 433 (466)
Q Consensus 362 ~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~-------~~~~~~~~~~~~~~~~v~~ 433 (466)
...+.+++++++++++|.|||+++|+ ++|+|++|++|||+++|.+ .|+..+ ..+|+..... ..+|..
T Consensus 339 ~~~~~~i~~~~~l~~~t~~pA~~lg~--~~G~l~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~sp~~g~~~---~g~v~~ 413 (425)
T PRK07627 339 WADEAKVPLARALARITSAPARVLGL--PAGRLAEGAPADLCVFDPDAHWRVEPRALKSQGKNTPFLGYEL---PGRVRA 413 (425)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHhCC--CCCcccCCCcCCEEEECCCCcEEEChhhccccCCCCCCcCCEe---eeEEEE
Confidence 01123599999999999999999999 4699999999999999998 343221 1233322211 247999
Q ss_pred EEEccEEEEEC
Q 012333 434 VMCNGQWVMKN 444 (466)
Q Consensus 434 v~v~G~~v~~~ 444 (466)
||++|++||++
T Consensus 414 t~v~G~~v~~~ 424 (425)
T PRK07627 414 TLVAGQVAFER 424 (425)
T ss_pred EEECCEEEeec
Confidence 99999999985
No 63
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=1e-31 Score=255.40 Aligned_cols=289 Identities=19% Similarity=0.203 Sum_probs=194.9
Q ss_pred eEEeCCCcEEeecccccccCCcccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc
Q 012333 69 QIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ 148 (466)
Q Consensus 69 ~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~ 148 (466)
++||++|++|+|||||+|+|+...... ...| ....+...........+.++.+||||++++++.
T Consensus 2 ~vID~~g~~v~PGliD~H~Hl~~~~~~-------~~~~---------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~g~~ 65 (342)
T cd01299 2 QVIDLGGKTLMPGLIDAHTHLGSDPGD-------LPLD---------LALPVEYRTIRATRQARAALRAGFTTVRDAGGA 65 (342)
T ss_pred cEEeCCCCEECCCeeeeeeeccccCCC-------cccc---------ccCCHHHHHHHHHHHHHHHHhCCCcEEEeCCCc
Confidence 689999999999999999998542110 0000 001223333344457788999999999999865
Q ss_pred CHHHHHHHHH----HhCCeEEeecccccCCCCCCcccc---------cCChHHHHHHHHHHHHHhccCCCCCeEEEEeec
Q 012333 149 HVSEMAKAVE----LLGLRACLVQSTMDCGEGLPASWA---------VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIR 215 (466)
Q Consensus 149 ~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 215 (466)
.... .+... ..|++.+.+........+...... ........++.++.++++.+.+...++++....
T Consensus 66 ~~~~-~~~~~~~g~~~gPr~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~~iK~~~~g~ 144 (342)
T cd01299 66 DYGL-LRDAIDAGLIPGPRVFASGRALSQTGGHGDPRGLSGLFPAGGLAAVVDGVEEVRAAVREQLRRGADQIKIMATGG 144 (342)
T ss_pred chHH-HHHHHHcCCccCCceeecchhhcccCCCCccccccccccccCCcceecCHHHHHHHHHHHHHhCCCEEEEeccCC
Confidence 4333 22222 245666555444322111111000 001112234455666666677788898876432
Q ss_pred c--------cccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh
Q 012333 216 Q--------IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 287 (466)
Q Consensus 216 ~--------~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 287 (466)
. ....+++.+.++++.+++.|+++.+|+.+.... ...+ ..+ ...+.|+..+++
T Consensus 145 ~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i--------------~~~l-~~G----~~~i~H~~~~~~ 205 (342)
T cd01299 145 VLSPGDPPPDTQFSEEELRAIVDEAHKAGLYVAAHAYGAEAI--------------RRAI-RAG----VDTIEHGFLIDD 205 (342)
T ss_pred cCCCCCCCcccCcCHHHHHHHHHHHHHcCCEEEEEeCCHHHH--------------HHHH-HcC----CCEEeecCCCCH
Confidence 1 124678999999999999999999999753211 1111 111 235899999999
Q ss_pred hhHHHHHhcCCeEEECccchhhc----------------------cCCccHHHHHHcCCcEEEccCCCC-CCCCCCHHHH
Q 012333 288 TEIGLLSRAGVKVSHCPASAMRM----------------------LGFAPIKEMLHADICVSLGTDGAP-SNNRMSIVDE 344 (466)
Q Consensus 288 ~~~~~~~~~g~~~~~~p~~~~~~----------------------~~~~~~~~~~~~gi~~~~gsD~~~-~~~~~~~~~~ 344 (466)
+.++++++.|+.++.||.+.... ....+++.+.+.|+++++|||.+. ......++.+
T Consensus 206 ~~~~~l~~~g~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~GTD~~~~~~~~~~~~~e 285 (342)
T cd01299 206 ETIELMKEKGIFLVPTLATYEALAAEGAAPGLPADSAEKVALVLEAGRDALRRAHKAGVKIAFGTDAGFPVPPHGWNARE 285 (342)
T ss_pred HHHHHHHHCCcEEeCcHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCchhHHHHH
Confidence 99999999999999998865321 234678899999999999999874 2222344555
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC
Q 012333 345 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (466)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~ 408 (466)
+.... . .++|+.++++++|.+||+++|+++++|+|++||.|||+|+|.|
T Consensus 286 ~~~~~--~-------------~~~~~~~al~~~T~~~a~~~g~~~~~G~i~~G~~ADlvvl~~~ 334 (342)
T cd01299 286 LELLV--K-------------AGGTPAEALRAATANAAELLGLSDELGVIEAGKLADLLVVDGD 334 (342)
T ss_pred HHHHH--H-------------hCCCHHHHHHHHHHHHHHHhCccCCcceECCCCcCCEEEECCC
Confidence 54321 1 2489999999999999999999888999999999999999999
No 64
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=2.6e-30 Score=246.95 Aligned_cols=343 Identities=18% Similarity=0.176 Sum_probs=196.5
Q ss_pred CCCCCCCCCCcccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhh--h-----hhccCCCeEEeCCCcEE
Q 012333 6 SGGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--Q-----QFSQMADQIIDLQSQIL 78 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~--~-----~~~~~~~~~iD~~G~~v 78 (466)
++|++...+..+..|++|+|++|+++. .. +..++|.|+||+|++|++..+.. . ....+++++||++|++|
T Consensus 55 ~~~~~~~~~~~~~~DlVItNa~IIDp~--~G-i~kaDIgIkDGrIaaIG~~~npd~~~gv~p~~~~g~~teVIDaeG~IV 131 (569)
T PRK13308 55 MGMAPGVTSADGALDFVLCNVTVIDPV--LG-IVKGDIGIRDGRIVGIGKAGNPDIMDGVDPRLVVGPGTDVRPAEGLIA 131 (569)
T ss_pred CCCCCCCCCccCcCCEEEECeEEEcCC--CC-eEEeEEEEECCEEEEecCCCCccccccccccccCCCCCeEEECCCCEE
Confidence 444333332335689999999999532 22 35679999999999999754211 0 01123678999999999
Q ss_pred eecccccccCCcccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc--------cC-
Q 012333 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QH- 149 (466)
Q Consensus 79 ~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~--------~~- 149 (466)
+|||||+|+|+.. +.. .+.++.+||||+++++. ..
T Consensus 132 tPG~ID~HVH~~~----------------------------Pg~--------~~aALagGVTTVi~gg~gPt~p~~t~g~ 175 (569)
T PRK13308 132 TPGAIDVHVHFDS----------------------------AQL--------VDHALASGITTMLGGGLGPTVGIDSGGP 175 (569)
T ss_pred EeCEEEeeeCCCC----------------------------ccH--------HHHHHcCCCcEEecCCcCCCCCCCCCCH
Confidence 9999999999821 110 14589999999998531 11
Q ss_pred --HHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHH
Q 012333 150 --VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLE 227 (466)
Q Consensus 150 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~ 227 (466)
+..+.+......++..+. +.+.. . ... .+.++.+.+...++. +..+..+++.+.+
T Consensus 176 ~~i~~~l~aa~~~pvN~g~~------gkG~~------s---~~a----eL~eli~aGA~GfKi----~ed~g~t~~~i~~ 232 (569)
T PRK13308 176 FNTGRMLQAAEAWPVNFGFL------GRGNS------S---KPA----ALIEQVEAGACGLKI----HEDWGAMPAAIDT 232 (569)
T ss_pred HHHHHHHHHHhcCCccEEEE------cCCcc------c---CHH----HHHHHHHCCCCEEee----cCCCCCCHHHHHH
Confidence 222333333222222111 11110 0 011 223333333333332 2333468889999
Q ss_pred HHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHH-HHhhhccCCCCeeEEEeecC----ChhhHHHHHhcCCeE-E
Q 012333 228 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKIEFLQNNLLSAHTVWV----NHTEIGLLSRAGVKV-S 301 (466)
Q Consensus 228 ~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~g~~~-~ 301 (466)
+++.|++++.++.+|+....... ..+ .+..+. +....+.|.... .++.++..-..++.. +
T Consensus 233 aL~~A~~~dv~VaiHadtlne~g------------~~E~t~~a~~--gr~iH~~H~egaggghapd~l~~~~~~n~lp~s 298 (569)
T PRK13308 233 CLEVADEYDFQVQLHTDTLNESG------------FVEDTLAAIG--GRTIHMYHTEGAGGGHAPDIIRVVGEPHCLPSS 298 (569)
T ss_pred HHHHHHhcCCEEEEeCCCcCcch------------HHHHHHHHhc--CCeEEEEeccCCccCchhHHHHHhCCCCccCCC
Confidence 99999999999999997633221 111 111111 222233332221 123333333333321 2
Q ss_pred ECccch---------------------------------hhccCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHH
Q 012333 302 HCPASA---------------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLA 348 (466)
Q Consensus 302 ~~p~~~---------------------------------~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~ 348 (466)
++|+-- .|...+..-.-+.+.|+..+++||+...+ -+++.++.+
T Consensus 299 tnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~afa~srir~~ti~ae~~l~d~g~~s~~~sds~~mg---r~~e~i~r~ 375 (569)
T PRK13308 299 TNPTNPYTVNTFDEHLDMTMVCHHLNPDVPEDVAFAESRIRAQTIAAEDVLHDIGAISMLGSDSQGMG---RIAEVIART 375 (569)
T ss_pred CCCCCCCccCchhhhcCeEEEecCCCCCCcchhhhhhhhccceeeccCchhhcCCcEEEEecchHHHh---HHHHHHHHH
Confidence 222211 11122233345788999999999997653 344554443
Q ss_pred HHHhccccc----ccCC-CCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCccccee
Q 012333 349 SLINKGREV----FANG-TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLV 423 (466)
Q Consensus 349 ~~~~~~~~~----~~~~-~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~ 423 (466)
+...+.... .... .......-+...|+++|.|||+++|+++++|+|++||.||||+|+.+.+.
T Consensus 376 ~q~a~~~~~~~g~l~~~~~~~~dn~rv~r~L~~~T~npA~alGi~~~vGsLe~Gk~ADLVv~d~d~fg------------ 443 (569)
T PRK13308 376 WQLASKMKDQRGPLPEDRGTFADNARIKRYIAKYTINPAITFGIDDHIGSLEPGKLADIVLWRPAFFG------------ 443 (569)
T ss_pred HHHHHHHhhcCCCCCcccccCCchhhhhHHHHHHhHHHHHHcCCCCCceeeCCCCcCCEEEECCcccC------------
Confidence 333221111 0000 00011122334699999999999999988999999999999999998332
Q ss_pred cccCCCCeeEEEEccEEEEEC
Q 012333 424 YCMRTENVVSVMCNGQWVMKN 444 (466)
Q Consensus 424 ~~~~~~~v~~v~v~G~~v~~~ 444 (466)
.++..||++|+++|..
T Consensus 444 -----v~p~~ti~~G~iv~~~ 459 (569)
T PRK13308 444 -----IKPELVIKGGFPAWAA 459 (569)
T ss_pred -----CCeeEEEECCEEEEec
Confidence 3688999999999863
No 65
>PLN02303 urease
Probab=100.00 E-value=1.7e-30 Score=256.03 Aligned_cols=342 Identities=16% Similarity=0.136 Sum_probs=201.5
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchh--hh-----hhccCCCeEEeCCCcEEeecccccccCC
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI--LQ-----QFSQMADQIIDLQSQILLPGFVNTHVHT 89 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~--~~-----~~~~~~~~~iD~~G~~v~PG~ID~H~H~ 89 (466)
...|++|+|++|++.. + +..+||+|+||+|++|++.... +. ...++++++||++|++|+|||||+|+|+
T Consensus 332 ~~~DlVItNa~IID~~--G--i~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGlIVtPG~ID~HVHf 407 (837)
T PLN02303 332 DSLDTVITNAVIIDYT--G--IYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGMIVTAGGIDCHVHF 407 (837)
T ss_pred CcCCEEEeCeEEECCC--C--cEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCCEEEeCEEEeecCC
Confidence 3579999999999632 2 3567999999999999975321 01 0112357899999999999999999998
Q ss_pred cccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc------------CHH---HHH
Q 012333 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------------HVS---EMA 154 (466)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~------------~~~---~~~ 154 (466)
.. +... ...+.+|+||++..|.. ... .+.
T Consensus 408 ~~----------------------------Pg~~--------~eaLasGVTTai~GGtgp~pnT~ptt~t~g~e~I~~~L 451 (837)
T PLN02303 408 IC----------------------------PQLA--------TEAIASGITTLVGGGTGPAHGTCATTCTPAPSHMKLML 451 (837)
T ss_pred CC----------------------------CcHH--------HHHHHHhHHHHHhcCCCCCCcccCcCCCCCHHHHHHHH
Confidence 21 1111 22455555555554311 111 222
Q ss_pred HHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHH
Q 012333 155 KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE 234 (466)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~ 234 (466)
+..+...++..+.. .+.. ....+.. ++.+.+ +.. +..+..+..+++.+.++++.+++
T Consensus 452 ~aa~~~pvn~Gf~g------kG~~---------s~l~eL~----elieaG---a~G-fK~h~d~gvTpelL~raLe~Ake 508 (837)
T PLN02303 452 QSTDDLPLNFGFTG------KGNT---------AKPEGLH----EIIKAG---AMG-LKLHEDWGTTPAAIDNCLDVAEE 508 (837)
T ss_pred HhcccCCCcEEEEc------cCcc---------cCHHHHH----HHHHcC---cEE-EEECCCCCCCHHHHHHHHHHHHH
Confidence 22222222222111 0100 1112222 222222 221 44445557789999999999999
Q ss_pred cCCccceeccCCcch---hHHHHhhcCCCCchHHHHhhhccCCCCe-----------eEEEeecC-ChhhHHHHHhcCCe
Q 012333 235 FKTGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQNNL-----------LSAHTVWV-NHTEIGLLSRAGVK 299 (466)
Q Consensus 235 ~~~~v~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~H~~~~-~~~~~~~~~~~g~~ 299 (466)
+++++++|+.. ..+ .+.....+ +..+++.++..+.++.+- ++...+.- .+.....+.++--.
T Consensus 509 lGVpVaIHAEd-LnE~G~vE~t~~a~--G~RpIh~~h~~Ga~gghapdi~~~~~~~nvlpsstnpt~p~t~nt~~e~~dm 585 (837)
T PLN02303 509 YDIQVTIHTDT-LNESGCVEHSIAAF--KGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTKNTIDEHLDM 585 (837)
T ss_pred cCCEEEEecCc-ccccchHHHHHHHH--CCChHHHHHhcCCCCCCCcHHHHhcCCCCccCCCCCCCCCCccCchhhhcCe
Confidence 99999999765 323 33333333 345788888888776421 11110000 01111112222112
Q ss_pred EEECccch-------------hhccCCccHHHHHHcCCcEEEccCCCCCCCCC----CHHHHHHHHHHHhcccccccCCC
Q 012333 300 VSHCPASA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRM----SIVDEMYLASLINKGREVFANGT 362 (466)
Q Consensus 300 ~~~~p~~~-------------~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 362 (466)
+.+|..-+ .|...+..-.-+.+.|+..+++||+...+.-. -.|+.-... ...+.......
T Consensus 586 ~m~~h~l~~~~~edvafa~srir~~tiaaed~l~d~G~~s~~~SDs~amgr~ge~i~r~~q~A~k~---~~~~g~l~~~~ 662 (837)
T PLN02303 586 LMVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVITRTWQTAHKM---KSQRGALEPRG 662 (837)
T ss_pred EEeecCCCCCCcchhhhhhhhccchhhccchhhhccCCEEEEeccchhhCcccceeeehHHHHHHH---HHhcCCCCCcc
Confidence 23332211 12223344455788999999999998554321 234332222 22222221111
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEE
Q 012333 363 TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 442 (466)
Q Consensus 363 ~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 442 (466)
......++.++|+++|.|||+++|+++++|+|++||.||||||+++.+. .++..||++|++||
T Consensus 663 ~~~dn~rv~~aL~~~TiN~A~AlG~~~~vGSLe~GK~ADlVvw~~~~fg-----------------~~~~~vi~~G~ivy 725 (837)
T PLN02303 663 ADNDNFRIKRYIAKYTINPAIAHGMSHFVGSVEVGKLADLVLWKPAFFG-----------------AKPEMVIKGGQIAW 725 (837)
T ss_pred ccccccCHHHHHHHHhHHHHHHCCcccCceeeCCCcccCEEEecccccC-----------------CCeeEEEECCEEEE
Confidence 1235688999999999999999999999999999999999999987332 47899999999999
Q ss_pred EC
Q 012333 443 KN 444 (466)
Q Consensus 443 ~~ 444 (466)
..
T Consensus 726 ~~ 727 (837)
T PLN02303 726 AQ 727 (837)
T ss_pred cc
Confidence 86
No 66
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.8e-31 Score=238.76 Aligned_cols=387 Identities=15% Similarity=0.183 Sum_probs=235.2
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
...++|+|++|++-|.. ..+||+++||.|.+|++...+ | .+.++||+.|++|+||.||.|+|+-+.+.
T Consensus 13 s~rllikgg~vvN~d~~----~~aDV~vedGiI~~vg~~l~i----p-gg~~~ida~g~~ViPGgID~Hthlq~p~~--- 80 (522)
T KOG2584|consen 13 SNRLLIKGGRVVNDDQS----FKADVYVEDGIIKEVGENLII----P-GGVKVIDATGKMVIPGGIDPHTHLQMPFM--- 80 (522)
T ss_pred ccceeeeCCEEEccCCc----eeeeEEeccCEEEEecccEEc----C-CCceEEecCCcEEecCccCccceeccccC---
Confidence 45689999999974432 456999999999999998654 3 37899999999999999999999943211
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc----CHHHHHHHHHH-hCCeEEeeccccc
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVEL-LGLRACLVQSTMD 172 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~----~~~~~~~~~~~-~g~~~~~~~~~~~ 172 (466)
. .+. ........++++..|+|++.|+--+ ++....+..++ +... .++|
T Consensus 81 ------------------G-~ts---~DdF~~GTkAAlaGGtTmiID~vlp~~~~slv~afe~wr~~Ad~k-----~cCD 133 (522)
T KOG2584|consen 81 ------------------G-MTS---VDDFFQGTKAALAGGTTMIIDFVLPDKGTSLVEAFEKWREWADPK-----VCCD 133 (522)
T ss_pred ------------------C-ccc---hhhhhcccHHHhcCCceEEEEEecCCCCchHHHHHHHHHhhcCCc-----eeee
Confidence 1 111 1122234467899999999996422 22222222222 1112 2222
Q ss_pred CCCCCC-cccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhH
Q 012333 173 CGEGLP-ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (466)
Q Consensus 173 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (466)
.+.... ..|. ..+.+..+.+. ++.+-..++++++....+..+++++.+.+..+++.|...++|+.......+
T Consensus 134 yglhv~It~W~-----~~v~eem~~l~--~ekGvnsF~~fmayk~~~~v~d~~lye~l~~~~~lgala~vHAEngd~iae 206 (522)
T KOG2584|consen 134 YGLHVGITWWS-----PSVKEEMEILV--KEKGVNSFKFFMAYKDLYMVRDSELYEALKVCAELGALAMVHAENGDAIAE 206 (522)
T ss_pred eeeeEeeeecC-----cchHHHHHHHh--hhcCcceEEeeeeeccccccCHHHHHHHHHHHhhcchhheehhhcchhhhh
Confidence 222111 1111 12222233333 455667788889999999999999999999999999999999976543222
Q ss_pred HHHh--hcCCCC--------c-------hHHHHhhhccCCCCeeEEEeecCCh-hhHHHHHhcCCeEEECccchh-----
Q 012333 252 VVMD--TRKVDH--------G-------TVTFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKVSHCPASAM----- 308 (466)
Q Consensus 252 ~~~~--~~~~~~--------~-------~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~g~~~~~~p~~~~----- 308 (466)
.... ..++.. . ...++......+-...+.|....+. +.+.++++.|..+.-.|..+-
T Consensus 207 ~q~~~l~~gitgPEgh~lSRPee~EaEA~~rai~ia~~~ncPlyvvhVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg 286 (522)
T KOG2584|consen 207 GQQRLLELGITGPEGHELSRPEELEAEATNRAITIARQANCPLYVVHVMSKSAADAIALARKKGRVVFGEPITASLGTDG 286 (522)
T ss_pred hhhHHHHcCCcCcccccccCchhhhHHHHHHHHHHHHhcCCCcceEEEeehhHHHHHHHHHhcCceeecccchhhhcccc
Confidence 1111 111111 0 0112233333334456778777654 456666666655444443220
Q ss_pred --------------------hc--cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHH--HHHhcccccccC----
Q 012333 309 --------------------RM--LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLA--SLINKGREVFAN---- 360 (466)
Q Consensus 309 --------------------~~--~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---- 360 (466)
|. ....-+..++..|..-..||||++.+... ..+... .....+-.....
T Consensus 287 ~hy~~~~w~~Aa~~v~sPPlr~d~~t~~~L~~lLa~g~L~~tgSdhctf~~~q---KalgKddFt~ip~GvnGvedrMsv 363 (522)
T KOG2584|consen 287 SHYWSKDWDHAAAFVTSPPLRPDPTTPDGLMDLLAEGDLQLTGSDHCTFTTEQ---KALGKDDFTKIPNGVNGVEDRMSV 363 (522)
T ss_pred hhhccCChhhcceeeeCCCCCCCCCCHHHHHHHHhcCccceeecCCCCCCHHH---HhhccCccccCCCcccccccccee
Confidence 00 01123557889999888899998865211 110000 000001000000
Q ss_pred ---CCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCC--------CcCCcccceecccCCC
Q 012333 361 ---GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV--------PVHDRITSLVYCMRTE 429 (466)
Q Consensus 361 ---~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~--------~~~~~~~~~~~~~~~~ 429 (466)
.-.....|++.+.+.-.++|+|++++|++++|+|++|.+|||||||++..... ...+.+..+.. .+
T Consensus 364 iwekgv~~G~md~~~fVavtstnaAkifnlYprKGrIavGsDADiVIwdp~at~tIS~~th~~~~d~NifEGm~~---~G 440 (522)
T KOG2584|consen 364 IWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPNATKTISAKTHHSANDFNIFEGMTV---HG 440 (522)
T ss_pred eeehhcccCccCcccEEEEecccchhheeccCcCceecccCCCcEEEECCCcceEeccccccccccceeecCcEe---cc
Confidence 01122457788999999999999999999999999999999999999832211 11222222211 25
Q ss_pred CeeEEEEccEEEEECCee-eeccHHHHH
Q 012333 430 NVVSVMCNGQWVMKNKKI-LLLMRGRLF 456 (466)
Q Consensus 430 ~v~~v~v~G~~v~~~g~~-~~~~~~~~~ 456 (466)
.+..||.+||+||++|++ +....|+++
T Consensus 441 ~plvtIsrGriv~eng~~~v~~g~G~fi 468 (522)
T KOG2584|consen 441 VPLVTISRGRVVYENGNLVVTEGSGRFI 468 (522)
T ss_pred eeEEEEeCCeEEEecCcEEEecCCCcee
Confidence 799999999999999986 344444443
No 67
>PRK02382 dihydroorotase; Provisional
Probab=99.98 E-value=4.8e-30 Score=250.45 Aligned_cols=372 Identities=18% Similarity=0.206 Sum_probs=215.1
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
|.|++|+|++|++.+ . +.+++|+|+||+|++|++.... + .+.++||++|++|+|||||+|+|+...
T Consensus 1 ~~dl~i~n~~v~~~~---~-~~~~~v~I~dg~I~~i~~~~~~----~-~~~~~id~~g~~v~PG~ID~H~H~~~~----- 66 (443)
T PRK02382 1 MRDALLKDGRVYYNN---S-LQPRDVRIDGGKITAVGKDLDG----S-SSEEVIDARGMLLLPGGIDVHVHFREP----- 66 (443)
T ss_pred CceEEEECCEEEeCC---C-ceEEEEEEECCEEEEecCCCCC----C-CCCeEEECCCCEEcCCEeeeeeeccCC-----
Confidence 478999999999632 2 3467999999999999764221 1 246899999999999999999997321
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-----HHHHHHHHHHhCCeEEeeccccc
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMD 172 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~ 172 (466)
.....+.+ ......++.+||||+++++... ...+........-+........
T Consensus 67 -------------------g~~~~e~~---~~~~~aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~- 123 (443)
T PRK02382 67 -------------------GYTHKETW---YTGSRSAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSIVDFGIN- 123 (443)
T ss_pred -------------------CCCchhhH---HHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCceEEEEEE-
Confidence 01111111 2234668899999999986431 1222222222222211111111
Q ss_pred CCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCe-EEEEee-cccccCCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 012333 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI-RIWFGI-RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~-~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (466)
+ +.. .. .++ +..+.+.+...+ +++... ......+++.+.++++.+++.+.++.+|+.+.....
T Consensus 124 -~-~~~-----~~----~~~----l~~l~~~gv~~~gkv~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~ 188 (443)
T PRK02382 124 -G-GVT-----GN----WDP----LESLWERGVFALGEIFMADSTGGMGIDEELFEEALAEAARLGVLATVHAEDEDLFD 188 (443)
T ss_pred -e-eec-----cc----hhh----HHHHHhcCccceeEEEEEecCCCcccCHHHHHHHHHHHHhcCCeEEEecCCHHHHH
Confidence 0 000 00 111 122222222222 333322 122345678899999999999999999997643321
Q ss_pred HHHHhhcC--------CCCch-------HHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhh------
Q 012333 251 QVVMDTRK--------VDHGT-------VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR------ 309 (466)
Q Consensus 251 ~~~~~~~~--------~~~~~-------~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~------ 309 (466)
.......+ ..... ...+......+.+..+.|.. +.+.++.+++..+...+||+....
T Consensus 189 ~~~~~~~g~~~~~~~~~~~p~~~E~~av~~~~~la~~~g~~~hi~h~s--s~~~~~~i~~~~vt~ev~ph~L~l~~~~~~ 266 (443)
T PRK02382 189 ELAKLLKGDADADAWSAYRPAAAEAAAVERALEVASETGARIHIAHIS--TPEGVDAARREGITCEVTPHHLFLSRRDWE 266 (443)
T ss_pred HhhHhhcCCCCHhhCCCcCCHHHHHHHHHHHHHHHHHhCCCEEEEECC--CHHHHHHHHHCCcEEEEchhhhhcCHHHHh
Confidence 11110000 00000 11222223334444444443 346677776666778888884310
Q ss_pred -c----cCCcc---------HHHHHHcCCcEEEccCCCCCCCC------------CCHHHHHHHHHHHhcccccccCCCC
Q 012333 310 -M----LGFAP---------IKEMLHADICVSLGTDGAPSNNR------------MSIVDEMYLASLINKGREVFANGTT 363 (466)
Q Consensus 310 -~----~~~~~---------~~~~~~~gi~~~~gsD~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (466)
. .-.+| +.+.++.|...+++|||.|+... +.-.+.+.. .+... .
T Consensus 267 ~~~~~~k~~PPlr~~~d~~aL~~~l~~g~i~~i~sDh~P~~~~~K~~~~~~~~~G~~g~e~~~~-~~~~~---------~ 336 (443)
T PRK02382 267 RLGTFGKMNPPLRSEKRREALWERLNDGTIDVVASDHAPHTREEKDADIWDAPSGVPGVETMLP-LLLAA---------V 336 (443)
T ss_pred ccCceEEEcCCCCChHHHHHHHHHHhCCCCCEEEcCCCCCCHHHhcCChhhCCCCcccHHHHHH-HHHHH---------H
Confidence 0 01123 34457789999999999987421 011111111 11111 0
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCC-CCCC-------cCCcccceecccCCCCeeEEE
Q 012333 364 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW-PMVP-------VHDRITSLVYCMRTENVVSVM 435 (466)
Q Consensus 364 ~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~-~~~~-------~~~~~~~~~~~~~~~~v~~v~ 435 (466)
...+++++++++++|.+||+++|+. .+|+|++|++|||+|+|.+.. ...+ ..+|+... ....+..||
T Consensus 337 ~~~~~~l~~~~~~~t~~pA~~~g~~-~~G~l~~G~~AD~vi~d~~~~~~~~~~~~~s~~~~sp~~g~----~~~~v~~ti 411 (443)
T PRK02382 337 RKNRLPLERVRDVTAANPARIFGLD-GKGRIAEGYDADLVLVDPDAAREIRGDDLHSKAGWTPFEGM----EGVFPELTM 411 (443)
T ss_pred HcCCCCHHHHHHHHhHHHHHHcCCC-CCCccCCCCcCCEEEEcCCCcEEEcHHHhcccCCCCCcCCC----EeceEEEEE
Confidence 1235999999999999999999995 679999999999999998732 2111 11122211 113678999
Q ss_pred EccEEEEECCeeeecc-HHHHHHH
Q 012333 436 CNGQWVMKNKKILLLM-RGRLFQL 458 (466)
Q Consensus 436 v~G~~v~~~g~~~~~~-~~~~~~~ 458 (466)
++|++||++|++..-. .|+++++
T Consensus 412 v~G~~v~~~~~~~~~~~~G~~~~~ 435 (443)
T PRK02382 412 VRGTVVWDGDDINAKRGRGEFLRG 435 (443)
T ss_pred ECCEEEEECCEEecCCCCceEeCC
Confidence 9999999999987543 5776654
No 68
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=99.98 E-value=4.3e-30 Score=244.05 Aligned_cols=358 Identities=18% Similarity=0.242 Sum_probs=211.3
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
++++|+|+++++. + ....+||.|++|+|++|+..... . ++.++||++|++|+|||||.|+|+..
T Consensus 1 ~~~lIk~~~iv~~-~---~~~~~di~i~~g~I~~Ig~~l~~----~-~~~~iiD~~g~~v~PG~ID~HVH~re------- 64 (430)
T COG0044 1 MDLLIKNARVVDP-G---EDEVADILIKDGKIAAIGKNLEP----T-SGAEIIDAKGLLVLPGLVDLHVHFRE------- 64 (430)
T ss_pred CcEEEeccEEEcC-C---CceEecEEEECCEEEEeccCCCC----C-CCCcEEECCCCEEccCeeEEEEecCC-------
Confidence 4689999999964 1 23567999999999999986432 1 47789999999999999999999932
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCH-----HHHHHHHHHh---C-CeEEeecc
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-----SEMAKAVELL---G-LRACLVQS 169 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~-----~~~~~~~~~~---g-~~~~~~~~ 169 (466)
.....-+ ......++++++|||++++|+.... ..+....... . +.......
T Consensus 65 -----------------pg~~~ke---~~~tgs~AAa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~ 124 (430)
T COG0044 65 -----------------PGFEHKE---TFETGSRAAAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSVVDYAFYGG 124 (430)
T ss_pred -----------------CCcchhh---hHHHHHHHHHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccceeEEEEEEE
Confidence 1111111 2344567799999999999874321 1211111111 1 11111111
Q ss_pred cccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcch
Q 012333 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (466)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (466)
.. .... . ..+..+... ...++.+..... .......+++.++.+...+..+.+|+.+....
T Consensus 125 it-------~~~~-----~----~~~~~~~~~---~~g~~~F~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~ 184 (430)
T COG0044 125 LT-------KGNL-----G----KLELTERGV---EAGFKGFMDDST-GALDDDVLEEALEYAAELGALILVHAEDDDLI 184 (430)
T ss_pred Ee-------cccc-----c----hhhhhhhhh---ccceEEEecCCc-CcCCHHHHHHHHHHHHhcCCeEEEecCChhHh
Confidence 11 1000 0 001111111 123344443333 44677889999999999999999999765321
Q ss_pred hH-HHHh------hcCCCCch-------HHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCeE--EECccchhhc--
Q 012333 250 NQ-VVMD------TRKVDHGT-------VTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKV--SHCPASAMRM-- 310 (466)
Q Consensus 250 ~~-~~~~------~~~~~~~~-------~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~~--~~~p~~~~~~-- 310 (466)
.. .... ..-.+... ...+......+.+..+.|...- +-+.++.++..|+.+ .+||+.-.--
T Consensus 185 ~~~~~~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~g~~vhi~HiSt~~sv~li~~ak~~g~~vt~EvtphHL~l~~~ 264 (430)
T COG0044 185 AEGVMNEGLRAPELGLAGRPPIAEASAIARDLELARATGARVHICHISTKESVELIRAAKAEGIRVTAEVTPHHLLLDEE 264 (430)
T ss_pred hhHHHhcCccchhhccCCCChHHHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHHHHHHhhcCCceEEeecchheEccHh
Confidence 11 0100 00011111 1122222233444444444321 123355555555554 4666633100
Q ss_pred ------------------cCCccHHHHHHcCCcEEEccCCCCCCCCCCH--HH---------HHHHHH---HHhcccccc
Q 012333 311 ------------------LGFAPIKEMLHADICVSLGTDGAPSNNRMSI--VD---------EMYLAS---LINKGREVF 358 (466)
Q Consensus 311 ------------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~--~~---------~~~~~~---~~~~~~~~~ 358 (466)
.....+++.+..|...+++|||.|+....+- +. +..... ++.+
T Consensus 265 ~~~~~~~~~k~nPPLR~~~dr~aL~~~l~~G~ID~iasDHaPht~eeK~~~f~~ap~G~~glE~~lpl~l~lv~~----- 339 (430)
T COG0044 265 DIEDLGTLAKVNPPLRDEEDREALWEALKDGVIDVIASDHAPHTLEEKRLPFEEAPSGIPGLETALPLLLTLVKK----- 339 (430)
T ss_pred HhhccCcceEECCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCCCHHHhccchhhCCCCCccHHHHHHHHHHHHHc-----
Confidence 1112456778999999999999987532111 00 011111 2222
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCC--Cc-----CCcccceecccCCCC
Q 012333 359 ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMV--PV-----HDRITSLVYCMRTEN 430 (466)
Q Consensus 359 ~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~--~~-----~~~~~~~~~~~~~~~ 430 (466)
..+|+.++++++|.|||+++||.. +|.|++|++|||+|+|.+ .|+.. .+ .+|+....+ ..+
T Consensus 340 -------g~lsl~~~v~~~S~nPA~ifgl~~-~g~i~~G~~ADl~lvD~~~~~~i~~~~~~sk~~~sPf~G~~~---~g~ 408 (430)
T COG0044 340 -------GRLSLERLVELLSTNPARIFGLPP-KGAIEEGADADLVLVDPDEEWTIRAEELYSKAKNSPFEGFEL---KGR 408 (430)
T ss_pred -------CCcCHHHHHHHHhhCHHHHhCCCC-CCcccCCCccCEEEEcCCCCeEEchhhhccccCCCCcCCCEE---eee
Confidence 249999999999999999999965 788999999999999998 33222 12 223322211 368
Q ss_pred eeEEEEccEEEEECCeee
Q 012333 431 VVSVMCNGQWVMKNKKIL 448 (466)
Q Consensus 431 v~~v~v~G~~v~~~g~~~ 448 (466)
|.+|+++|+++|.+++..
T Consensus 409 v~~Ti~rG~~v~~~~~~~ 426 (430)
T COG0044 409 VVATILRGKVVYEDGEVI 426 (430)
T ss_pred EEEEEECCEEEEECCcEe
Confidence 999999999999999754
No 69
>PRK08044 allantoinase; Provisional
Probab=99.98 E-value=2.7e-30 Score=251.62 Aligned_cols=365 Identities=15% Similarity=0.169 Sum_probs=207.1
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
++|++|+|++|++.+ . . ..++|+|+||+|++|++... .+.++||++|++|+|||||+|+|+....
T Consensus 2 ~~~~~i~n~~vi~~~--~-~-~~~~i~I~dg~I~~i~~~~~-------~~~~~iD~~G~~v~Pg~iD~h~h~~~~~---- 66 (449)
T PRK08044 2 SFDLIIKNGTVILEN--E-A-RVVDIAVKGGKIAAIGQDLG-------DAKEVMDASGLVVSPGMVDAHTHISEPG---- 66 (449)
T ss_pred CceEEEECcEEEcCC--C-C-EEEEEEEECCEEEEecCCCC-------CCCeEEECCCCEEcCCeeccccccCCCC----
Confidence 468999999999733 2 2 34699999999999986421 2568999999999999999999983210
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-c-----CHHHHHHHHHHhCCeEEeecccc
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-Q-----HVSEMAKAVELLGLRACLVQSTM 171 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-~-----~~~~~~~~~~~~g~~~~~~~~~~ 171 (466)
....+ ........++..||||+.+++. . ....+....+...-+........
T Consensus 67 --------------------~~~~e---~~~~~~~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~vd~~~~ 123 (449)
T PRK08044 67 --------------------RSHWE---GYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQL 123 (449)
T ss_pred --------------------ccccc---cHHHHHHHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCeeeEEEE
Confidence 00011 2223446689999999999872 1 22222222222211111111100
Q ss_pred cCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecc-------cccCCHHHHHHHHHHHHHcCCccceecc
Q 012333 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-------IMNATDRLLLETRDMAREFKTGIHMHVA 244 (466)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~l~~~~~~a~~~~~~v~~H~~ 244 (466)
. +... . ...+... +.+.+-..++.++...+ ....++..+.+.++.+++.|.++.+|+.
T Consensus 124 -~--~~~~-----~---~~~ei~~----l~~~gv~~fk~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E 188 (449)
T PRK08044 124 -G--GLVS-----Y---NLDRLHE----LDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGELGQPVLVHCE 188 (449)
T ss_pred -e--eeCC-----C---CHHHHHH----HHHcCceEEEEEecccCcccccCCccCcCHHHHHHHHHHHHhcCCEEEEecC
Confidence 0 1110 0 1111122 22223334554433211 1223556778888888889999999997
Q ss_pred CCcchhHHH--HhhcC--------CCCch-------HHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCe--EEECc
Q 012333 245 EIPYENQVV--MDTRK--------VDHGT-------VTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCP 304 (466)
Q Consensus 245 ~~~~~~~~~--~~~~~--------~~~~~-------~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~--~~~~p 304 (466)
+........ ....+ ..... ...+......+.+..+.|...- +-+.++.+++.|.. ..+||
T Consensus 189 ~~~l~~~~~~~~~~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~~~g~~vhi~HiSt~~~~~~i~~ak~~G~~it~e~~~ 268 (449)
T PRK08044 189 NALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCP 268 (449)
T ss_pred CHHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEcCh
Confidence 654321111 00001 00001 1122222233334445554421 12555666666644 45677
Q ss_pred cchhhc--------------------cCCccHHHHHHcCCcEEEccCCCCCCCCC---CHHHH--------HHHHHHHhc
Q 012333 305 ASAMRM--------------------LGFAPIKEMLHADICVSLGTDGAPSNNRM---SIVDE--------MYLASLINK 353 (466)
Q Consensus 305 ~~~~~~--------------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~---~~~~~--------~~~~~~~~~ 353 (466)
+....- .....+++.+..|...+++|||.|+.... ++++. ..+...+..
T Consensus 269 h~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~sDH~P~~~~~K~~~~~~~~~g~~g~e~~l~~~~~~ 348 (449)
T PRK08044 269 HYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDE 348 (449)
T ss_pred hhhcccHHHhhCCCCcEEEcCCCCChHHHHHHHHHHhCCCceEEEcCCCCCChHHccCChhhCCCCceEHHHHHHHHHHH
Confidence 643210 11234555677999999999999874211 12211 111111110
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCC-------cCCcccceecc
Q 012333 354 GREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVP-------VHDRITSLVYC 425 (466)
Q Consensus 354 ~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~-------~~~~~~~~~~~ 425 (466)
. ....+++++++++++|.|||++||+. ++|+|++|++|||+|+|.+ .|+..+ -.+|+....+
T Consensus 349 ~--------v~~~~l~~~~~v~~~s~npA~~lgl~-~~G~i~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l- 418 (449)
T PRK08044 349 A--------VQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPGKDADFVFIQPNSSYVLKNEDLEYRHKVSPYVGRTI- 418 (449)
T ss_pred H--------HHcCCCCHHHHHHHHHHhHHHHhCCC-CCCcCCCCCccCEEEECCCCcEEECHHHccccCCCCCCCCCEE-
Confidence 0 11235999999999999999999994 4799999999999999997 333221 1223222211
Q ss_pred cCCCCeeEEEEccEEEEECCee
Q 012333 426 MRTENVVSVMCNGQWVMKNKKI 447 (466)
Q Consensus 426 ~~~~~v~~v~v~G~~v~~~g~~ 447 (466)
.++|..||++|++||++++.
T Consensus 419 --~G~v~~t~~~G~~v~~~~~~ 438 (449)
T PRK08044 419 --GARITKTILRGDVIYDIEQG 438 (449)
T ss_pred --eeeEEEEEECCEEEEECCcc
Confidence 36899999999999999874
No 70
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=99.97 E-value=7.9e-30 Score=241.99 Aligned_cols=323 Identities=20% Similarity=0.235 Sum_probs=190.6
Q ss_pred EEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCCC
Q 012333 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDV 101 (466)
Q Consensus 22 lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~ 101 (466)
+|+|++|++.++ +.. ++|.|+||+|++|++... ...++||++|++|+|||||+|+|.........
T Consensus 1 ~i~~~~vv~~~~---~~~-~~i~i~dg~I~~i~~~~~-------~~~~~iD~~G~~v~PGlID~H~h~~e~~~~pr---- 65 (376)
T TIGR02318 1 VLSNARLVLEDE---VVE-GSVVIEDGAIADIGEGPV-------ALAEAIDGEGDLLLPGLIDLHTDNLERHMSPR---- 65 (376)
T ss_pred CEeCeEEECCCc---eEe-eeEEEECCEEEEecCCCC-------CCCceEeCCCCEEeccEEEcccCccccCcCCC----
Confidence 589999997543 333 499999999999987422 24568999999999999999999843111000
Q ss_pred CchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc--------cCHH---HHHHHHHHhCCe--EE---
Q 012333 102 DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVS---EMAKAVELLGLR--AC--- 165 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~--------~~~~---~~~~~~~~~g~~--~~--- 165 (466)
+ ...+...+ ......++++.+||||++++.. .... ...++.....-+ ..
T Consensus 66 p------------~~~~~~~~---~~~~~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 130 (376)
T TIGR02318 66 P------------GVDWPIDA---AIVEHDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDRGLLRADH 130 (376)
T ss_pred C------------CCCcchHH---HHHHHHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhcCchhhhc
Confidence 0 00111111 2223446688999999999741 1111 122111221111 10
Q ss_pred -eeccc--------------ccCCC-C-------CCcccccCChHHHHH-----------HHHHHHHHhccCCCCCeEEE
Q 012333 166 -LVQST--------------MDCGE-G-------LPASWAVRTTDDCIQ-----------SQKELYAKHHHAADGRIRIW 211 (466)
Q Consensus 166 -~~~~~--------------~~~~~-~-------~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~ 211 (466)
+...+ ...+. + .+..+.......... +..+.+.+....
T Consensus 131 ~~h~~~e~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~-------- 202 (376)
T TIGR02318 131 RLHLRCELPNEEVLPELEELIDDPRVDLISLMDHTPGQRQFRDLEKYREYYRGKRGLSDDEFDEIVEERIAR-------- 202 (376)
T ss_pred eeEEEEEecCccHHHHHHHHhcCCCcCEEEEeCCCCCcccccCHHHHHHHHHhhcCCCHHHHHHHHHHHHHH--------
Confidence 00000 00000 0 000000000000000 000001000000
Q ss_pred EeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHH
Q 012333 212 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIG 291 (466)
Q Consensus 212 ~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~ 291 (466)
......+.+.+++++|+++|+++..|..+.......... .+. ....| .++.+..+
T Consensus 203 -----~~~~~~e~i~~~v~~A~~~G~~v~sH~~~~~e~i~~a~~--------------~Gv----~~~E~--~~t~e~a~ 257 (376)
T TIGR02318 203 -----RAEYGLANRSEIAALARARGIPLASHDDDTPEHVAEAHD--------------LGV----TISEF--PTTLEAAK 257 (376)
T ss_pred -----HhhccHHHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHH--------------CCC----Chhcc--CCCHHHHH
Confidence 001236778889999999999999998654432211111 111 11233 36888899
Q ss_pred HHHhcCCeEEECccchhhc---cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCC
Q 012333 292 LLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAAL 368 (466)
Q Consensus 292 ~~~~~g~~~~~~p~~~~~~---~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 368 (466)
.+.+.|+.+..+.+...+. .+..+++.+++.|+.++++||+.+. .++..+.... . ...++
T Consensus 258 ~~~~~G~~v~~~~p~~~r~~~~~~~~~l~~~~~~G~~~~l~SD~~p~----~~l~~~~~~~-~------------~~~gl 320 (376)
T TIGR02318 258 EARSLGMQILMGAPNIVRGGSHSGNLSARELAHEGLLDVLASDYVPA----SLLLAAFQLA-D------------DVEGI 320 (376)
T ss_pred HHHHcCCeEEECCccccccccccchHHHHHHHHCCCcEEEEcCCCcH----HHHHHHHHHH-H------------hhcCC
Confidence 9999999988775433332 2356788999999999999999653 2222221110 1 11258
Q ss_pred CHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEE
Q 012333 369 PAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 442 (466)
Q Consensus 369 s~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 442 (466)
++.++++++|.|||+++|++ ++|+|++|++|||+++|... ....+..||++|++||
T Consensus 321 ~~~~al~~~T~npA~~lgl~-~~G~I~~G~~ADlvvvd~~~-----------------~~~~v~~v~~~G~~v~ 376 (376)
T TIGR02318 321 PLPQAVKMVTKNPARAVGLS-DRGSIAPGKRADLVRVHRVD-----------------GVPRIRAVWRAGRRVY 376 (376)
T ss_pred CHHHHHHHHhHHHHHHcCCC-CCCcCCCCCcccEEEEcCCC-----------------CCccceEEEECCEEeC
Confidence 99999999999999999996 57999999999999999951 0137899999999986
No 71
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=99.97 E-value=1.6e-29 Score=241.45 Aligned_cols=332 Identities=18% Similarity=0.202 Sum_probs=189.3
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhh-------hhhccCCCeEEeCCCcEEeecccccccCC
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL-------QQFSQMADQIIDLQSQILLPGFVNTHVHT 89 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~-------~~~~~~~~~~iD~~G~~v~PG~ID~H~H~ 89 (466)
+.+|++|+|++|++.. . +..++|.|+||+|++|++..+.. ......++++||++|++|+|||||+|+|+
T Consensus 63 ~~~DlVI~Na~IiD~~---g-i~~adI~IkdGrIvaIG~agnp~~~~~v~~~~~~g~~teVIDaeG~iV~PG~ID~HvH~ 138 (567)
T cd00375 63 DVLDLVITNALIIDYT---G-IYKADIGIKDGRIVAIGKAGNPDIMDGVTPNMIVGPSTEVIAGEGKIVTAGGIDTHVHF 138 (567)
T ss_pred ccCCEEEECeEEECCC---C-cEEEEEEEECCEEEEEecCCCccccccccccccCCCCCeEEECCCCEEeeceEECccCC
Confidence 4579999999999532 2 34579999999999999754210 01122357899999999999999999998
Q ss_pred cccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc---------------CHHHHH
Q 012333 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------------HVSEMA 154 (466)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~---------------~~~~~~ 154 (466)
. .+.. ...++.+||||++++|.. .+..+.
T Consensus 139 ~----------------------------~P~~--------~~aAlagGVTTvI~~G~gP~~gtnatp~t~g~~~l~~ml 182 (567)
T cd00375 139 I----------------------------CPQQ--------IEEALASGITTMIGGGTGPAAGTKATTCTPGPWNIKRML 182 (567)
T ss_pred C----------------------------CccH--------HHHHHcCCCcEEEcCCcCcccccCCCCCCCCHHHHHHHH
Confidence 2 1111 245889999999996211 112223
Q ss_pred HHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHH
Q 012333 155 KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE 234 (466)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~ 234 (466)
+......+...+.. .+. ...+. .+.++.+.+... +..+..+..++..+.++++.+++
T Consensus 183 ~aa~~~pin~g~~g------kg~---------~~~l~----eL~e~~~aGA~G----fK~~eD~g~t~~~i~~aL~~A~~ 239 (567)
T cd00375 183 QAADGLPVNIGFLG------KGN---------GSSPD----ALAEQIEAGACG----LKLHEDWGATPAAIDTCLSVADE 239 (567)
T ss_pred HHhhcCCceEEEEe------cCc---------cccHH----HHHHHHHcCCEE----EEecCCCCCCHHHHHHHHHHHHh
Confidence 33332222221111 111 01111 222222332222 22333345688999999999999
Q ss_pred cCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC----hhhHHHHHhcCCe-EEECccch--
Q 012333 235 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAGVK-VSHCPASA-- 307 (466)
Q Consensus 235 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~g~~-~~~~p~~~-- 307 (466)
++.++.+|+....... ..+. ......+......|..... ++.++..-..++. .+++|+--
T Consensus 240 ~dv~VaiHadtlne~g------------~~E~-t~aa~~gr~iH~~H~egaggghapdi~~~~~~~nvlp~stnpt~p~t 306 (567)
T cd00375 240 YDVQVAIHTDTLNESG------------FVED-TIAAIKGRTIHTYHTEGAGGGHAPDIIKVAGHPNVLPSSTNPTRPFT 306 (567)
T ss_pred hCCEEEEECCCCCcch------------HHHH-HHHHhcCCeEEEEecCCCCcccchHHHHhcCCCCcccCCCCCCCCCc
Confidence 9999999997633211 1111 1111112222222322111 2222222222222 11222211
Q ss_pred -------------------------------hhccCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHH-HHHHHhccc
Q 012333 308 -------------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMY-LASLINKGR 355 (466)
Q Consensus 308 -------------------------------~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~-~~~~~~~~~ 355 (466)
.|...+..-.-+.+.|+..+++||+...+.-...+...+ .+....+.+
T Consensus 307 ~nt~~e~~dm~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~s~~~sDs~~mgr~ge~~~r~~q~a~k~~~~~ 386 (567)
T cd00375 307 VNTLDEHLDMLMVCHHLDPNIPEDVAFAESRIRAETIAAEDVLHDLGAISIMSSDSQAMGRVGEVILRTWQTAHKMKAQR 386 (567)
T ss_pred cCchhhhcCeEEeecCCCCCCcchhhhhhhhccchhhccchhhhccCcEEEEccchhhcCccceeeechHHHHHHHHHhc
Confidence 111222333457889999999999975443222221111 111111111
Q ss_pred ccccCCCCCCCCCCH---HHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCee
Q 012333 356 EVFANGTTDPAALPA---ETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVV 432 (466)
Q Consensus 356 ~~~~~~~~~~~~ls~---~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~ 432 (466)
+.. .+ .....+. .++|+++|.|||+++|+++++|+|++||.||||||+.+.+. .++.
T Consensus 387 g~~-~~--~~~~~~n~r~~~~L~~~Tin~A~alG~~~~vGSLe~GK~ADlVv~d~~~f~-----------------~~p~ 446 (567)
T cd00375 387 GPL-PE--DSGDADNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWEPAFFG-----------------VKPE 446 (567)
T ss_pred CCC-Cc--ccccCchHHHHHHHHHhhHHHHHHcCcccCceeeCCCCccCEEEEcCcccC-----------------CCee
Confidence 111 00 0112344 44599999999999999999999999999999999998432 4688
Q ss_pred EEEEccEEEEEC
Q 012333 433 SVMCNGQWVMKN 444 (466)
Q Consensus 433 ~v~v~G~~v~~~ 444 (466)
.||++|+++|..
T Consensus 447 ~vi~~G~iv~~~ 458 (567)
T cd00375 447 MVLKGGFIAYAQ 458 (567)
T ss_pred EEEECCEEEEec
Confidence 999999999987
No 72
>PRK09060 dihydroorotase; Validated
Probab=99.97 E-value=9.9e-30 Score=247.54 Aligned_cols=372 Identities=17% Similarity=0.175 Sum_probs=209.4
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
+++|++|+|++|++++. . ..++|+|+||+|++|++.... .+.++||++|++|+|||||+|+|+...
T Consensus 3 ~~~d~~i~~~~v~~~~~--~--~~~~i~i~~g~I~~i~~~~~~------~~~~~iD~~G~~v~PG~ID~HvH~~~~---- 68 (444)
T PRK09060 3 QTFDLILKGGTVVNPDG--E--GRADIGIRDGRIAAIGDLSGA------SAGEVIDCRGLHVLPGVIDSQVHFREP---- 68 (444)
T ss_pred CcCcEEEECCEEECCCC--C--eeeEEEEECCEEEEecCCCCC------CCceEEECCCCEEccCEEeccccccCC----
Confidence 34789999999997442 2 347999999999999864321 246899999999999999999997320
Q ss_pred ccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-----HHHHHHHHHHhCCeEEeecccc
Q 012333 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTM 171 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~ 171 (466)
.....+ ......+.++.+||||+++++... ...+.........+........
T Consensus 69 --------------------~~~~~e---~~~t~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~~d~~~~ 125 (444)
T PRK09060 69 --------------------GLEHKE---DLETGSRAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMHCDFAFY 125 (444)
T ss_pred --------------------CCCccc---hHHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccceeeEEEE
Confidence 011111 122234568999999999986321 2233333332221111111111
Q ss_pred cCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEee--cccccCCHHHHHHHHHHHHHcCCccceeccCCcch
Q 012333 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI--RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (466)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (466)
..+ .. ... .+..+.. .+. +...++.++.. ......+...+.+++ +..+..+.+|+.+....
T Consensus 126 ~~~--~~------~~~---~~l~el~-~~~--gv~g~k~fm~~~~~~~~~~d~~~l~~~~---~~~~~~v~~H~E~~~l~ 188 (444)
T PRK09060 126 VGG--TR------DNA---DELAELE-RLP--GCAGIKVFMGSSTGDLLVEDDEGLRRIL---RNGRRRAAFHSEDEYRL 188 (444)
T ss_pred ecc--CC------CCH---HHHHHHH-hhc--CceEEEEEeccCCCCcccCCHHHHHHHH---HhCCCeEEEECCCHHHH
Confidence 000 00 011 1111211 111 22234443322 112223445555554 44588899999764321
Q ss_pred hHHHHh--hcC------CC-Cc------hHHHHhhhccCCCCeeEEEeecCChhhHHHHHhc--CCeEEECccchhhc--
Q 012333 250 NQVVMD--TRK------VD-HG------TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA--GVKVSHCPASAMRM-- 310 (466)
Q Consensus 250 ~~~~~~--~~~------~~-~~------~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~--g~~~~~~p~~~~~~-- 310 (466)
... .. ..+ .. .. ....+...+..+.+..+.|... .+.++.+++. .+...+||+.....
T Consensus 189 ~~~-~~~~~~g~~~~~~~~~p~~aE~~av~~~~~la~~~~~~lhi~h~st--~~~v~~i~~~~~~vt~ev~ph~l~l~~~ 265 (444)
T PRK09060 189 RER-KGLRVEGDPSSHPVWRDEEAALLATRRLVRLARETGRRIHVLHVST--AEEIDFLADHKDVATVEVTPHHLTLAAP 265 (444)
T ss_pred HHH-HHHHhcCCcccccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCC--HHHHHHHHHhCCCeEEEeChHHhccCch
Confidence 110 10 000 00 00 0112333334455555666553 4555555443 35566777432100
Q ss_pred -------------------cCCccHHHHHHcCCcEEEccCCCCCCCC------------CCHHHHHHHHHHHhccccccc
Q 012333 311 -------------------LGFAPIKEMLHADICVSLGTDGAPSNNR------------MSIVDEMYLASLINKGREVFA 359 (466)
Q Consensus 311 -------------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 359 (466)
.....+++.++.|+..+++|||.|.... +.-.+.+ ...+...
T Consensus 266 ~~~~~~~~~~k~~PPlr~~~~~~~l~~al~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~-~~l~~~~------ 338 (444)
T PRK09060 266 ECYERLGTLAQMNPPIRDARHRDGLWRGVRQGVVDVLGSDHAPHTLEEKAKPYPASPSGMTGVQTL-VPIMLDH------ 338 (444)
T ss_pred hhcccCCceEEEeCCCCCHHHHHHHHHHHhCCCccEEecCCCCCCHHHhcCCcccCCCCcccHHHH-HHHHHHH------
Confidence 1123456778889999999999886311 1111111 1111110
Q ss_pred CCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCC-CCCC-------CcCCcccceecccCCCCe
Q 012333 360 NGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS-WPMV-------PVHDRITSLVYCMRTENV 431 (466)
Q Consensus 360 ~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~-~~~~-------~~~~~~~~~~~~~~~~~v 431 (466)
.....+|++++++++|.|||+++|+ +++|+|++|++|||||+|.+. |... ...+|+....+ ..++
T Consensus 339 ---v~~g~l~~~~~~~~~s~~pa~~~gl-~~~G~l~~G~~ADlvl~d~~~~~~v~~~~~~s~~~~sp~~g~~l---~g~~ 411 (444)
T PRK09060 339 ---VNAGRLSLERFVDLTSAGPARIFGI-AGKGRIAVGYDADFTIVDLKRRETITNEWIASRCGWTPYDGKEV---TGWP 411 (444)
T ss_pred ---HHcCCCCHHHHHHHHhHhHHHHhCC-CCCCcccCCCcCCEEEEcCCCCEEEChHHhcccCCCCCCCCCEE---eeeE
Confidence 0112399999999999999999999 457999999999999999873 2211 11233332222 2478
Q ss_pred eEEEEccEEEEECCeeeeccHHHHHHHH
Q 012333 432 VSVMCNGQWVMKNKKILLLMRGRLFQLQ 459 (466)
Q Consensus 432 ~~v~v~G~~v~~~g~~~~~~~~~~~~~~ 459 (466)
..||++|++||++|+++....|+.+++-
T Consensus 412 ~~tiv~G~~v~~~g~~~~~~~G~~~~~~ 439 (444)
T PRK09060 412 VGTIVRGQRVMWDGELVGPPTGEPVRFL 439 (444)
T ss_pred EEEEECCEEEEECCEEccCCCccCcccc
Confidence 9999999999999999876677776543
No 73
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.97 E-value=1.7e-30 Score=246.29 Aligned_cols=337 Identities=17% Similarity=0.155 Sum_probs=193.0
Q ss_pred CCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCCCCchHhhhhccccccCCCChhHHHHH
Q 012333 47 QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYIS 126 (466)
Q Consensus 47 ~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (466)
||||++|++.... + .+.++||++|++|+|||||+|+|++...........+..++. .++...+...+.+..
T Consensus 1 ~gkI~~i~~~~~~----~-~~~~vid~~g~~v~Pg~id~h~h~~~~~~~~~~~~~d~~e~~----~~~~p~~~~~d~~~~ 71 (359)
T cd01309 1 DGKIVAVGAEITT----P-ADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANEET----DPVTPHVRAIDGINP 71 (359)
T ss_pred CCEEEEEcCCCCC----C-CCCeEEeCCCCEEcCcEEecccccCccccCCCcCcCCccccC----CCCCceeEeecccCC
Confidence 7999999986542 2 367899999999999999999999876555433333322111 111222333333444
Q ss_pred HHHHHHHHHhcCceeeeecCc-cCHHH------------HHHHH--HHhCCeEEeecccccCCCCCCcccccCChHHHHH
Q 012333 127 TLLCGIELIHSGVTCFAEAGG-QHVSE------------MAKAV--ELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQ 191 (466)
Q Consensus 127 ~~~~~~~~~~~GvTtv~~~~~-~~~~~------------~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (466)
....+..++++|||++...++ .++.. ..+.. ....++..++....... +-......... ....
T Consensus 72 ~~~~~~~a~~~GvT~~~v~p~~~~~~gg~~~~i~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~-~~~~~~p~trm-g~~~ 149 (359)
T cd01309 72 DDEAFKRARAGGVTTVQVLPGSANLIGGQGVVIKTDGGTIEDMFIKAPAGLKMALGENPKRVY-GGKGKEPATRM-GVAA 149 (359)
T ss_pred CCHhHHHHHhcCceEEEecCCCCCcccceEEEEECCCCCHHHhcccCCceeEEecCCCCcccc-cccCCCccchH-HHHH
Confidence 444556788999999865442 11100 00000 01112211111000000 00000000011 1111
Q ss_pred HHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhc
Q 012333 192 SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE 271 (466)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (466)
..++.+.+.+......... -.........+..++.++..++. .+++.+|+..... ....+...+
T Consensus 150 ~lr~~~~~a~~y~~~~~~~-~~~~~~~~~~d~~l~~l~~~~~~-~~~v~vHa~~~~~--------------i~~~l~~~~ 213 (359)
T cd01309 150 LLRDAFIKAQEYGRKYDLG-KNAKKDPPERDLKLEALLPVLKG-EIPVRIHAHRADD--------------ILTAIRIAK 213 (359)
T ss_pred HHHHHHHHHHHHHHHhhhh-hhcccCCCCCCccHHHHHHHHcC-CeeEEEEeCCHHH--------------HHHHHHHHH
Confidence 2222221111100000000 00000000122245555555553 3889999975322 122222222
Q ss_pred cCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc------cCCccHHHHHHcC-CcEEEccCCCCCCCCCCHHHH
Q 012333 272 FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM------LGFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDE 344 (466)
Q Consensus 272 ~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~------~~~~~~~~~~~~g-i~~~~gsD~~~~~~~~~~~~~ 344 (466)
..+-+.++.|+... .+.++++++.++.++++|...... ....++..+.++| ++++++||++... ...++..
T Consensus 214 e~g~~~~i~H~~~~-~~~~~~la~~gv~v~~~P~~~~~~~~~~~~~~~~~~~~l~~aGGv~valgsD~~~~~-~~~l~~~ 291 (359)
T cd01309 214 EFGIKITIEHGAEG-YKLADELAKHGIPVIYGPTLTLPKKVEEVNDAIDTNAYLLKKGGVAFAISSDHPVLN-IRNLNLE 291 (359)
T ss_pred HcCCCEEEECchhH-HHHHHHHHHcCCCEEECccccccccHHHhhcchhhHHHHHHcCCceEEEECCCCCcc-chhHHHH
Confidence 23445789999886 788999999999999999865432 3556888999998 9999999996431 1122222
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceec
Q 012333 345 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVY 424 (466)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~ 424 (466)
...+ . ..+++.+++++++|.|||+++|+++++|+|++|+.|||||||.+++ +.
T Consensus 292 ~~~a--~-------------~~gl~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~dpl-----~~------- 344 (359)
T cd01309 292 AAKA--V-------------KYGLSYEEALKAITINPAKILGIEDRVGSLEPGKDADLVVWNGDPL-----EP------- 344 (359)
T ss_pred HHHH--H-------------HcCCCHHHHHHHHHHHHHHHhCCCCCcccCCCCCccCEEEECCCcc-----cc-------
Confidence 2111 1 1259999999999999999999988899999999999999999943 32
Q ss_pred ccCCCCeeEEEEccEEEE
Q 012333 425 CMRTENVVSVMCNGQWVM 442 (466)
Q Consensus 425 ~~~~~~v~~v~v~G~~v~ 442 (466)
..++..||++|++||
T Consensus 345 ---~~~v~~v~i~G~~v~ 359 (359)
T cd01309 345 ---TSKPEQVYIDGRLVY 359 (359)
T ss_pred ---cCcccEEEECCEEeC
Confidence 258999999999986
No 74
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=6.2e-29 Score=225.12 Aligned_cols=349 Identities=20% Similarity=0.235 Sum_probs=210.8
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
.+|.|++|+++ ..++.++.|.|+||+|.+|.+. +. | ...++||.+|.+|+|||||+|+|.+...
T Consensus 2 ~~~~~~~i~t~---~~~~~~~~v~i~dg~I~~i~~~-~~----p-~~~e~id~~G~~l~PGfID~hihG~gG~------- 65 (380)
T COG1820 2 YALKNGRIFTG---HGVLDGGAVVIEDGKIEAVVPA-EL----P-ADAEIIDLKGALLVPGFIDLHIHGGGGA------- 65 (380)
T ss_pred ceeeccEEEcC---cceEECcEEEEcCCEEEEEecC-cC----C-CcceeecCCCCEecccEEEEeecCcCcc-------
Confidence 47899999975 4567888999999999999982 22 2 3779999999999999999999985311
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecC-ccCHHHHHHHHHH---h-CCeEEeecccccCCC
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQHVSEMAKAVEL---L-GLRACLVQSTMDCGE 175 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~-~~~~~~~~~~~~~---~-g~~~~~~~~~~~~~~ 175 (466)
+ .+. .........-.+..++.|||++...- ....+.+.+++.. . .....-......+|+
T Consensus 66 -~--------------~~D-~~~~~~l~~i~~~~~~~GtTsfLpT~iT~~~e~i~~al~~~~e~~~~~ga~ilGiHLEGP 129 (380)
T COG1820 66 -D--------------FMD-AGSVETLETMAEAHLRHGTTSFLPTLITASLEKIKAALRAIREAIAKGGAQILGIHLEGP 129 (380)
T ss_pred -c--------------ccC-ccCHHHHHHHHHHhhhcCeeeeeeecccCCHHHHHHHHHHHHHHHhccCCceEEEEeecC
Confidence 0 011 01111222334668899999986522 2233333222221 1 111112234455777
Q ss_pred CCCcccccCChHHHHH-HHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHH
Q 012333 176 GLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (466)
Q Consensus 176 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (466)
.+++.......+..+. ...+.++.+.+..++.++...-.+.. .- ..+++..+.+.|+.+++-.....++.....
T Consensus 130 ~ls~~kkGAh~~~~ir~~~~~~~~~~~~~a~g~i~~vTlAPE~-~~----~~e~i~~l~~~giivs~GHS~Atye~~~~a 204 (380)
T COG1820 130 FLSPEKKGAHNPEYIRPPDPEELEQLIAAADGLIKLVTLAPEL-DG----TKELIRLLANAGIVVSIGHSNATYEQARAA 204 (380)
T ss_pred ccCHhhccCCCHHHhCCCCHHHHHHHHhhccCceEEEEECCCC-CC----CHHHHHHHHhCCeEEEecCccccHHHHHHH
Confidence 7777776666655553 33444555555555444442222221 11 234455566667776663333333222111
Q ss_pred hhcCCCCchHHHHhhhccCCCC----------------eeEEEeecCChhhHHHHHhcC-CeEEECccchhhccCCccHH
Q 012333 255 DTRKVDHGTVTFLDKIEFLQNN----------------LLSAHTVWVNHTEIGLLSRAG-VKVSHCPASAMRMLGFAPIK 317 (466)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~----------------~~~~H~~~~~~~~~~~~~~~g-~~~~~~p~~~~~~~~~~~~~ 317 (466)
...+.. ...+.++.+..+..| .+|..+.|++|..++.+.+.. ..-.++-+..|+..+.+.-.
T Consensus 205 ~~~Ga~-~~THlfNaMs~l~hREPGvvGA~L~~~~~~~eiIaDG~HVhP~~~~ia~~~kg~~~i~LVTDam~a~G~~dg~ 283 (380)
T COG1820 205 FEAGAT-FVTHLFNAMSGLHHREPGVVGAALDNPDVYAEIIADGVHVHPAAIRLALKAKGGDKIVLVTDAMAAAGLPDGE 283 (380)
T ss_pred HHhCcc-EEEeeccCCCCCCCCCCcccceeecCCCeEEEEEccCcccCHHHHHHHHhccCCceEEEEEccccccCCCCcc
Confidence 111111 112233333322211 278899999999999887775 33233334455443332211
Q ss_pred HH-------HHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCc
Q 012333 318 EM-------LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDND 390 (466)
Q Consensus 318 ~~-------~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~ 390 (466)
.. .+.| .+.-.|....++.+.|.+.++...-. .+++++||++|+|.+||+.+|++++
T Consensus 284 y~lgg~~V~v~~g--~~~~~~GtLAGS~Ltm~~avrn~v~~--------------~~~~~~eAv~maS~~PA~~lgl~~~ 347 (380)
T COG1820 284 YILGGQTVTVADG--ARRLEDGTLAGSTLTMDEAVRNLVEW--------------GGISLAEAVRMASLNPAKALGLDDR 347 (380)
T ss_pred EEECCEEEEEECC--EEECCCCceeeeeeeHHHHHHHHHHH--------------hCCCHHHHHHHhhhhHHHHhCCcCc
Confidence 11 1222 22234554455567788887765322 1489999999999999999999999
Q ss_pred ccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEE
Q 012333 391 IGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 443 (466)
Q Consensus 391 ~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 443 (466)
+|+|++|++||||+||.+ .++..||++|++++.
T Consensus 348 ~G~i~~G~~Adlvvld~d--------------------~~v~~T~i~G~~~~~ 380 (380)
T COG1820 348 LGSIKPGKDADLVVLDDD--------------------LNVKATWINGEKVFN 380 (380)
T ss_pred ccccCCCcccCEEEECCC--------------------CcEEEEEECCEEeeC
Confidence 999999999999999998 699999999998873
No 75
>PRK09059 dihydroorotase; Validated
Probab=99.97 E-value=2.7e-28 Score=235.69 Aligned_cols=362 Identities=14% Similarity=0.133 Sum_probs=202.6
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
++.|++|+|++|+++++ ....+++|+|++|+|++|++..... ..+ .+.++||++|++|+|||||+|+|+...
T Consensus 1 ~~~~~~i~n~~v~~~~~--~~~~~~~v~I~~G~I~~i~~~~~~~-~~~-~~~~viDa~G~~v~PG~ID~HvH~~~~---- 72 (429)
T PRK09059 1 MMRPILLANARIIDPSR--GLDEIGTVLIEDGVIVAAGKGAGNQ-GAP-EGAEIVDCAGKAVAPGLVDARVFVGEP---- 72 (429)
T ss_pred CCcCEEEEeeEEECCCC--CcccceEEEEECCEEEEecCccccc-cCC-CCCeEEECCCCEEeccEEecccccCCC----
Confidence 35789999999996543 3335679999999999998643110 011 256899999999999999999998320
Q ss_pred ccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-----HHHHHHHHHHh----CCeEEee
Q 012333 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELL----GLRACLV 167 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-----~~~~~~~~~~~----g~~~~~~ 167 (466)
.. ..........+.++.+|||++.+++... ...+....... .+.....
T Consensus 73 --------------------~~---~~~e~~~~~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~ 129 (429)
T PRK09059 73 --------------------GA---EHRETIASASRAAAAGGVTSIIMMPDTDPVIDDVALVEFVKRTARDTAIVNIHPA 129 (429)
T ss_pred --------------------Cc---hhhhhHHHHHHHHHhCCcEEEEeccCCCCCCCCHHHHHHHHHHhcccCcccEEEE
Confidence 00 1111222344668999999999987431 12222222111 2222221
Q ss_pred cccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCc
Q 012333 168 QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (466)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 247 (466)
..... + . ....+.+... +.+. .+..+.. ......+...+.++++.+++.+.++.+|+.+..
T Consensus 130 ~~~~~-~--~--------~~~~l~e~~~----l~~~---Gv~~f~~-~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~ 190 (429)
T PRK09059 130 AAITK-G--L--------AGEEMTEFGL----LRAA---GAVAFTD-GRRSVANTQVMRRALTYARDFDAVIVHETRDPD 190 (429)
T ss_pred eEEec-C--C--------CCcchHHHHH----HHhc---CcEEEec-CCcccCCHHHHHHHHHHHHhcCCEEEEecCChh
Confidence 11110 0 0 0111121112 2221 2332221 112233556688999999999999999997643
Q ss_pred chh------HHHHhhcC-CCCch-------HHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCe--EEECccchhhc
Q 012333 248 YEN------QVVMDTRK-VDHGT-------VTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCPASAMRM 310 (466)
Q Consensus 248 ~~~------~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~--~~~~p~~~~~~ 310 (466)
... .......+ ..... ...+......+.+..+.|...- +-+.++.+++.|+. ..+||+.-...
T Consensus 191 l~~~~~~~~~~~~~~~~~~~rP~~aE~~av~r~~~la~~~~~~~hi~hvs~~~~~~~i~~ak~~g~~vt~ev~phhL~l~ 270 (429)
T PRK09059 191 LGGNGVMNEGLFASWLGLSGIPREAEVIPLERDLRLAALTRGRYHAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLN 270 (429)
T ss_pred hhcCCCcCCcHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEecCCHHHHHHHHHHHHCCCCEEEeecHHHHhcc
Confidence 211 00000110 00001 1122222233444444444331 12445556666755 45787743210
Q ss_pred -----------cCCc---------cHHHHHHcCCcEEEccCCCCCCCCC---C---------HHHHHHHHHHHhcccccc
Q 012333 311 -----------LGFA---------PIKEMLHADICVSLGTDGAPSNNRM---S---------IVDEMYLASLINKGREVF 358 (466)
Q Consensus 311 -----------~~~~---------~~~~~~~~gi~~~~gsD~~~~~~~~---~---------~~~~~~~~~~~~~~~~~~ 358 (466)
.-.+ .+++.+..|...+++|||.|+.... + -++.+.... ...
T Consensus 271 ~~~~~~~~~~~kvnPPLR~~~d~~~L~~~l~~g~id~i~sDh~p~~~~~K~~~~~~~~~G~~gle~~l~~~-~~~----- 344 (429)
T PRK09059 271 ENDIGEYRTFFKLSPPLRTEDDRVAMVEAVASGTIDIIVSSHDPQDVDTKRLPFSEAAAGAIGLETLLAAA-LRL----- 344 (429)
T ss_pred HHHHhccCCccEEcCCCCCHHHHHHHHHHHHcCCCcEEEeCCCCCCHHHCcCChhhCCCCcccHHHHHHHH-HHH-----
Confidence 1112 3445678898999999999874211 1 111111111 110
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCC-------cCCcccceecccCCCC
Q 012333 359 ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVP-------VHDRITSLVYCMRTEN 430 (466)
Q Consensus 359 ~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~-------~~~~~~~~~~~~~~~~ 430 (466)
.....++++++++++|.|||+++|| + +|+|++|++||||++|.+ .|+..+ -.+|+....+ .++
T Consensus 345 ----v~~~~l~l~~~~~~~s~nPA~~~gl-~-~G~l~~G~~ADlvl~d~~~~~~v~~~~~~s~~~~sPf~G~~l---~G~ 415 (429)
T PRK09059 345 ----YHNGEVPLLRLIEALSTRPAEIFGL-P-AGTLKPGAPADIIVIDLDEPWVVDPEDLKSRSKNTPFEEARF---QGR 415 (429)
T ss_pred ----HHcCCCCHHHHHHHHhHHHHHHhCC-C-cCcccCCCcCCEEEECCCCCEEECcccCccCCCCCCCCCCEE---eeE
Confidence 0122489999999999999999999 4 599999999999999997 333221 1223322211 368
Q ss_pred eeEEEEccEEEEE
Q 012333 431 VVSVMCNGQWVMK 443 (466)
Q Consensus 431 v~~v~v~G~~v~~ 443 (466)
|..||++|++||+
T Consensus 416 v~~ti~~G~~v~~ 428 (429)
T PRK09059 416 VVRTIVAGKTVYE 428 (429)
T ss_pred EEEEEECCEEEee
Confidence 9999999999986
No 76
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=99.97 E-value=2.8e-28 Score=241.68 Aligned_cols=176 Identities=23% Similarity=0.203 Sum_probs=132.0
Q ss_pred ccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcC
Q 012333 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG 297 (466)
Q Consensus 218 ~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g 297 (466)
...+++.+.++++.++++|+++++|+.+...... .... ........+..+.+..+.|+..+++++++++++.|
T Consensus 290 ~~~~~e~l~~~~~~a~~~g~~v~~Ha~gd~~i~~-~l~~------~~~~~~~~g~~~~r~~i~H~~~~~~~~~~~l~~~g 362 (479)
T cd01300 290 LLISPEELEELVRAADEAGLQVAIHAIGDRAVDT-VLDA------LEAALKDNPRADHRHRIEHAQLVSPDDIPRFAKLG 362 (479)
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEEEecHHHHHH-HHHH------HHHHHHhcCCCCCCceeeecccCCHHHHHHHHHcC
Confidence 3467899999999999999999999975332211 1110 11112222334567899999999999999999999
Q ss_pred CeEEECccchhh--------------ccCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCC
Q 012333 298 VKVSHCPASAMR--------------MLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 363 (466)
Q Consensus 298 ~~~~~~p~~~~~--------------~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (466)
+.+++||.+... ....+|++.+++.|+++++|||+++.. .+++..++.+......... .. ..
T Consensus 363 v~~~~~P~~~~~~~~~~~~~~lg~~~~~~~~p~~~~~~~Gv~v~lGSD~~~~~--~~p~~~~~~av~~~~~~~~-~~-~~ 438 (479)
T cd01300 363 VIASVQPNHLYSDGDAAEDRRLGEERAKRSYPFRSLLDAGVPVALGSDAPVAP--PDPLLGIWAAVTRKTPGGG-VL-GN 438 (479)
T ss_pred CceEeCcccccCchHHHHHhcccHHHHhcCchHHHHHHCCCeeeccCCCCCCC--CCHHHHHHHHheeeCCCCC-CC-CC
Confidence 999999986521 135689999999999999999997542 5788887766543221110 00 01
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEE
Q 012333 364 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 404 (466)
Q Consensus 364 ~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv 404 (466)
..+++|++++++++|.+||+++|+++++|+|++||.|||||
T Consensus 439 ~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe~Gk~ADlvv 479 (479)
T cd01300 439 PEERLSLEEALRAYTIGAAYAIGEEDEKGSLEPGKLADFVV 479 (479)
T ss_pred ccccCCHHHHHHHHHHHHHHHhccccccccccCCcccceeC
Confidence 34679999999999999999999998899999999999986
No 77
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=99.97 E-value=3e-28 Score=239.83 Aligned_cols=327 Identities=17% Similarity=0.197 Sum_probs=192.9
Q ss_pred eEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccC
Q 012333 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (466)
Q Consensus 20 ~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~ 99 (466)
|++|+|++|+++.+ ..+..++|.|++|+|++|++. .+.++||++|++|+|||||+|+|+..
T Consensus 1 dlli~n~~ivd~~~--~~~~~~dI~I~~g~I~~ig~~---------~~~~viDa~G~~v~PG~ID~H~Hi~~-------- 61 (552)
T TIGR01178 1 DIVIKNAKIIDVYN--GEIIPGDIAIANGHIAGVGKY---------NGVKVIDALGEYAVPGFIDAHIHIES-------- 61 (552)
T ss_pred CEEEEeeEEEeCCC--CcEEeeeEEEECCEEEEecCC---------CCCeEEECCCCEEEeCeEecccccCC--------
Confidence 58999999996433 234557999999999999863 14589999999999999999999832
Q ss_pred CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-----CHH---HHHHHHHHhCCeEEeecccc
Q 012333 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVS---EMAKAVELLGLRACLVQSTM 171 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-----~~~---~~~~~~~~~g~~~~~~~~~~ 171 (466)
.+.....+. ..++.+||||+++++.. ... .+.+......++.+......
T Consensus 62 -----------------~~~~~~~~~------~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~~~~~d~~~~~~s~ 118 (552)
T TIGR01178 62 -----------------SMLTPSEFA------KLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAKKTPLNFYFMLPSC 118 (552)
T ss_pred -----------------CCCChhHHH------HHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhhcCCcEEEEECCCC
Confidence 111122222 34789999999986532 222 22333333444443322211
Q ss_pred cCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhH
Q 012333 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (466)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (466)
.++.+..+.... -..++..+.+++ .+--.++.++..+.....+++.++.+ +.+++.+..+..|+.......
T Consensus 119 --vp~~~~e~~g~~--~~~~~i~~~~~~---~~V~glke~m~~~~v~~~d~~~l~~i-~~a~~~g~~I~gHap~l~~~e- 189 (552)
T TIGR01178 119 --VPALQFETSGAV--LTAEDIDELMEL---DEVLGLAEVMDYPGVINADIEMLNKI-NSARKRNKVIDGHCPGLSGKL- 189 (552)
T ss_pred --CCCCcccCCCCc--cCHHHHHHHHcC---CCccEEEEEecchhhcCCCHHHHHHH-HHHHhCCCEEEecCCCCCHHH-
Confidence 111110110000 012222333321 12223444444333333445555554 788999999999986432111
Q ss_pred HHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhccCCccHHHHH--HcCCcEEEc
Q 012333 252 VVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEML--HADICVSLG 329 (466)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~--~~gi~~~~g 329 (466)
...+.. ......|... +.++...-.++|+.+.+.-.+..+ ....+..++ ..+.+++++
T Consensus 190 ------------L~~~~~-----aGi~~dHe~~-s~~ea~e~~~~Gm~~~ir~gs~~~--n~~~~~~~~~~~~~~~~~l~ 249 (552)
T TIGR01178 190 ------------LNKYIS-----AGISNDHEST-SIEEAREKLRLGMKLMIREGSAAK--NLEALHPLINEKNCRSLMLC 249 (552)
T ss_pred ------------HHHHHH-----cCCCCCcCcC-CHHHHHHHHHCCCEEEEeCCcccc--CHHHHHHHHhhcCCceEEEE
Confidence 111111 1123556554 556666666788887765333321 112222222 356889999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCC
Q 012333 330 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 409 (466)
Q Consensus 330 sD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~ 409 (466)
||... ..+++...+....+.+.. ..++++++|++++|.|||+++|++ ++|+|++|+.|||++++..
T Consensus 250 TD~~~---~~~~~~~g~l~~~v~~ai---------~~g~~~~~Al~maT~npA~~lgl~-~~G~I~pG~~ADlvvl~~l- 315 (552)
T TIGR01178 250 TDDRH---VNDILNEGHINHIVRRAI---------EHGVDPFDALQMASINPAEHFGID-VGGLIAPGDPADFVILKDL- 315 (552)
T ss_pred eCCCC---hhHHHhcCCHHHHHHHHH---------HcCCCHHHHHHHHHHHHHHHcCCC-CCcccCCCCcCCEEEECCC-
Confidence 99421 112333222222222111 124999999999999999999996 4799999999999999952
Q ss_pred CCCCCcCCcccceecccCCCCeeEEEEccEEEEEC-----Ceee
Q 012333 410 WPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN-----KKIL 448 (466)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~-----g~~~ 448 (466)
...++..||++|++|.++ |+..
T Consensus 316 -----------------~~~~v~~v~~~G~~v~~~~~~~~g~~~ 342 (552)
T TIGR01178 316 -----------------RNFKVNKTYVKGKLLDLNEVFNDEISR 342 (552)
T ss_pred -----------------CCceEEEEEECCEEEcccccccCCccc
Confidence 125899999999999997 7643
No 78
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=99.97 E-value=4.2e-28 Score=228.88 Aligned_cols=332 Identities=20% Similarity=0.290 Sum_probs=208.4
Q ss_pred CcccceEEEEccEEEeecCCcceeeceEEEEECCEEEEE-cCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccc
Q 012333 15 LGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAI-GQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (466)
Q Consensus 15 ~~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~I-g~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~ 93 (466)
..+.+|++++||++++.- ...+..++|+|.+|+|+.| ++.. .+++++||+.|++|.|||||.|.|+
T Consensus 20 G~~~adlv~~ng~ivdv~--~gei~~~dIaI~~grI~~v~~~~~-------~e~~~~iDa~g~yivPGfID~H~HI---- 86 (584)
T COG1001 20 GRAKADLVLKNGRIVDVV--TGEIYKGDIAIAGGRIVGVIGEYR-------AEATEVIDAAGRYIVPGFIDAHLHI---- 86 (584)
T ss_pred CCCCCCEEEECCEEEEee--eccEEeeeEEEECCEEEEeecCcC-------cccceeecCCCCEeccceeecceec----
Confidence 355789999999999754 3345667999999999995 4432 1478999999999999999999999
Q ss_pred cccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeec--------CccCHHHHHHHHHHhCCeEE
Q 012333 94 AKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA--------GGQHVSEMAKAVELLGLRAC 165 (466)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~--------~~~~~~~~~~~~~~~g~~~~ 165 (466)
++.+..+..|.+. .+.+||||++.- |.....-+.+..+...++.+
T Consensus 87 ---------------------ESSm~tP~~FA~~------Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~~pl~~~ 139 (584)
T COG1001 87 ---------------------ESSMLTPSEFARA------VLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKETPLKVY 139 (584)
T ss_pred ---------------------cccccCHHHHHHH------hhccCceEEeeCcHHHHhhccHHHHHHHHHHHhhCCeEEE
Confidence 7777777777666 689999998763 33344556667777777777
Q ss_pred eecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccC
Q 012333 166 LVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (466)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 245 (466)
...+..-....+... ...-..+..++++.+-.-. .+.-.+..++.-..+++.+ ..++.+++.+.++.-|+-.
T Consensus 140 ~~~pScVPat~~Et~----Ga~l~a~~i~e~~~~p~Vi---gl~E~Mn~pgVi~~D~~~l-~kl~a~~~~~k~VdGHapg 211 (584)
T COG1001 140 VMLPSCVPATPFETS----GAELTAEDIKELLEHPEVI---GLGEMMNFPGVIEGDPDML-AKLEAARKAGKPVDGHAPG 211 (584)
T ss_pred EecccCccCCccccC----CceecHHHHHHHhhCCCcc---chhhhcCCchhccCCHHHH-HHHHHHHHcCCeecccCCC
Confidence 655443222111110 1111112222322221110 1111134444444455544 4566789999999999865
Q ss_pred CcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhccCCccH-HHHHHcC-
Q 012333 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPI-KEMLHAD- 323 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~-~~~~~~g- 323 (466)
.... ....+...+.. ..|- ..+.|+...-.++|+.+.+.--+..+. ...+ ..+-+.+
T Consensus 212 l~g~-------------~Ln~Y~aaGi~-----tDHE-~~t~EEa~~klr~Gm~i~iReGS~a~d--l~~l~~~i~e~~~ 270 (584)
T COG1001 212 LSGK-------------ELNAYIAAGIS-----TDHE-STTAEEALEKLRLGMKIMIREGSAAKD--LAALLPAITELGS 270 (584)
T ss_pred CChH-------------HHHHHHhcCCC-----cCcc-cCCHHHHHHHHhCCcEEEEEcCchhhh--HHHHHHHHhhcCC
Confidence 3211 12222222221 2233 346667666667898887653333221 1112 2223334
Q ss_pred CcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEE
Q 012333 324 ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMV 403 (466)
Q Consensus 324 i~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlv 403 (466)
=.++++||-.... ++..+-.+-.++.+ .-++|+++.+|++|+|.|||+.+||++ +|.|+||+.||||
T Consensus 271 ~~~~lcTDD~~p~---dl~~eGhld~~vR~---------Ai~~Gv~p~~a~qmAtiN~A~~~gl~~-~G~iAPG~~ADlv 337 (584)
T COG1001 271 RRVMLCTDDRHPD---DLLEEGHLDRLVRR---------AIEEGVDPLDAYQMATINPAEHYGLDD-LGLIAPGRRADLV 337 (584)
T ss_pred ceEEEECCCCChh---HhhhcCCHHHHHHH---------HHHcCCCHHHHHHHHhcCHHHHcCCcc-cccccCCccccEE
Confidence 3588999865321 12211111111111 112469999999999999999999965 9999999999999
Q ss_pred EEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCe
Q 012333 404 VVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 446 (466)
Q Consensus 404 v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 446 (466)
+++.- +..++..|+++|++|.++|+
T Consensus 338 i~~DL------------------~~~~v~~V~~~G~~v~~~g~ 362 (584)
T COG1001 338 ILEDL------------------RNFKVTSVLIKGRVVAEDGK 362 (584)
T ss_pred EEccc------------------ccCceeEEEECCEEEecCCc
Confidence 99874 23689999999999999997
No 79
>PRK08417 dihydroorotase; Provisional
Probab=99.97 E-value=2.2e-28 Score=233.96 Aligned_cols=329 Identities=13% Similarity=0.132 Sum_probs=187.3
Q ss_pred EEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCCCCchHhhhhccccccCCCChhH
Q 012333 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED 122 (466)
Q Consensus 43 v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (466)
|+|+||||++|++.. .+.++||++|++|+|||||+|+|+.. .....
T Consensus 1 i~I~dG~I~~i~~~~--------~~~~viDa~g~~vlPG~ID~HvH~~~------------------------~~~~~-- 46 (386)
T PRK08417 1 IRIKDGKITEIGSDL--------KGEEILDAKGKTLLPALVDLNVSLKN------------------------DSLSS-- 46 (386)
T ss_pred CEEECCEEEEecCCC--------CCCeEEECCCCEEccCeeEEeeeeCC------------------------CCcCh--
Confidence 579999999998642 25689999999999999999999821 01111
Q ss_pred HHHHHHHHHHHHHhcCceeeeecCccCH-----HHHHHHHHHhCC--eEEeecccccCCCCCCcccccCChHHHHHHHHH
Q 012333 123 SYISTLLCGIELIHSGVTCFAEAGGQHV-----SEMAKAVELLGL--RACLVQSTMDCGEGLPASWAVRTTDDCIQSQKE 195 (466)
Q Consensus 123 ~~~~~~~~~~~~~~~GvTtv~~~~~~~~-----~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (466)
.......+.++.+||||+++|+.... ..+....+..+. ......... . .......
T Consensus 47 --e~~~t~s~aA~aGGvTtv~dmpnt~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~------~~~~~~~---- 108 (386)
T PRK08417 47 --KNLKSLENECLKGGVGSIVLYPDSTPAIDNEIALELINSAQRELPMQIFPSIRA------L------DEDGKLS---- 108 (386)
T ss_pred --hhHHHHHHHHHcCCcEEEEeCCCCCCCCCCHHHHHHHHHHhhccCCcEEEEEEE------E------CCCccHH----
Confidence 12234557799999999999974211 122222221111 111110000 0 0111112
Q ss_pred HHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh------hcC-CCCc------
Q 012333 196 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD------TRK-VDHG------ 262 (466)
Q Consensus 196 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~------~~~-~~~~------ 262 (466)
.+..+.+.|...++. . ...+++.+.++++.+++.+.++.+|+.+.......... ..+ .+..
T Consensus 109 ~i~~l~~~Gv~~~k~----~--~~~~~~~l~~~~~~a~~~g~~V~~HaEd~~~~~~~~~~~g~~~~~~~~~~rp~~aE~~ 182 (386)
T PRK08417 109 NIATLLKKGAKALEL----S--SDLDANLLKVIAQYAKMLDVPIFCRCEDSSFDDSGVMNDGELSFELGLPGIPSIAETK 182 (386)
T ss_pred HHHHHHHCCCEEEEC----C--CCCCHHHHHHHHHHHHHcCCEEEEeCCCHHHhhHHHHhcChhhHHhCCCCCCHHHHHH
Confidence 223333322222221 1 14677889999999999999999999774332211000 000 0000
Q ss_pred -hHHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCC--eEEECccchhhc-----------cC---------CccHHH
Q 012333 263 -TVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGV--KVSHCPASAMRM-----------LG---------FAPIKE 318 (466)
Q Consensus 263 -~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~--~~~~~p~~~~~~-----------~~---------~~~~~~ 318 (466)
....+...+..+.+..+.|...- +-+.++.+++.|+ ...+||++-..- .- ...+++
T Consensus 183 ~v~~~~~la~~~~~~lhi~hvS~~~~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlR~~~d~~~L~~ 262 (386)
T PRK08417 183 EVAKMKELAKFYKNKVLFDTLALPRSLELLDKFKSEGEKLLKEVSIHHLILDDSACENFNTAAKLNPPLRSKEDRLALLE 262 (386)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEechHHHeeCHHHhcCcCcccEECCCCCCHHHHHHHHH
Confidence 11123333334445555554431 1233444555664 456888744210 01 124456
Q ss_pred HHHcCCcEEEccCCCCCCCCC---CHH---------HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 319 MLHADICVSLGTDGAPSNNRM---SIV---------DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 319 ~~~~gi~~~~gsD~~~~~~~~---~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
.+..|...+++|||.|+.... +++ +.+. ..+.... .....++++++++++|.+||++||
T Consensus 263 ~l~~g~Id~i~SDHaP~~~~~K~~~~~~a~~G~~g~e~~~-~~~~~~~--------v~~~~~~~~~~~~~~t~~pA~~lg 333 (386)
T PRK08417 263 ALKEGKIDFLTSLHSAKSNSKKDLAFDEAAFGIDSICEYF-SLCYTYL--------VKEGIITWSELSRFTSYNPAQFLG 333 (386)
T ss_pred HHhcCCceEEEcCCCCCCHHHccCCHhHCCCCchHHHHHH-HHHHHHH--------HhcCCCCHHHHHHHHHHHHHHHhC
Confidence 778899999999999874211 111 1111 1111100 112248999999999999999999
Q ss_pred CCCcccccccCCccCEEEEcCCCCCCCC-cCCcccceecccCCCCeeEEEEccEEEEE
Q 012333 387 WDNDIGSLEAGKKADMVVVDPFSWPMVP-VHDRITSLVYCMRTENVVSVMCNGQWVMK 443 (466)
Q Consensus 387 l~~~~G~i~~G~~ADlvv~d~~~~~~~~-~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 443 (466)
+. + |+|++|++|||+++|.+.....+ ..+|+....+ ..+|..||++|++||+
T Consensus 334 l~-~-G~l~~G~~ADlvi~d~~~~~~~~~~~~p~~g~~~---~g~v~~tiv~G~~v~~ 386 (386)
T PRK08417 334 LN-S-GEIEVGKEADLVLFDPNESTIIDDNFSLYSGDEL---YGKIEAVIIKGKLYLE 386 (386)
T ss_pred CC-C-CccCCCCcCCEEEEcCCCCeEeCCCCCCccCCEE---eccEEEEEECCEEEeC
Confidence 94 4 99999999999999998322211 2344433322 2479999999999974
No 80
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=99.96 E-value=9.1e-28 Score=226.52 Aligned_cols=348 Identities=18% Similarity=0.208 Sum_probs=204.7
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
++++|+|++|++.+ ....+++|.|+||+|++|++..+. + +..++||++|++|+|||||+|+|.....
T Consensus 3 ~~~~i~n~~i~~~~---~~~~~~~i~V~dGkI~~I~~~~~~----~-~~~~viD~~G~~i~PGfID~HvHg~~g~----- 69 (380)
T TIGR00221 3 ESYLLKDIAIVTGN---EVIDNGAVGINDGKISTVSTEAEL----E-PEIKEIDLPGNVLTPGFIDIHIHGCGGV----- 69 (380)
T ss_pred ceEEEEeeEEECCC---CEEeccEEEEECCEEEEEcccccC----C-CCCeEEECCCCEEccceeeeeeccccCc-----
Confidence 57999999999642 355678999999999999875322 1 2457999999999999999999983210
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-HHHHHH---HHHH-h-CCeEEeeccccc
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAK---AVEL-L-GLRACLVQSTMD 172 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-~~~~~~---~~~~-~-g~~~~~~~~~~~ 172 (466)
....... .........+++.|||++.++.... ...+.+ .... . .........+..
T Consensus 70 ----------------~~~~~~~---e~~~~~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~~~a~~lG~Hl 130 (380)
T TIGR00221 70 ----------------DTNDASF---ETLEIMSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKEKNAQALGLHL 130 (380)
T ss_pred ----------------CCCCCCH---HHHHHHHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhccCCceeeeEee
Confidence 0000111 2223345678999999998864322 222222 2211 1 111223344555
Q ss_pred CCCCCCcccccCChHHHHH-HHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhH
Q 012333 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (466)
+++.+++........+.+. ...+.++++.+...+.++...-.+..+. -.++++.+.+.|+.+++-.....++..
T Consensus 131 EGPfi~~~~~Gah~~~~i~~p~~~~~~~~~~~~~~~i~~vTlAPE~~~-----~~~~i~~l~~~gi~vs~GHs~A~~~~~ 205 (380)
T TIGR00221 131 EGPFLSPEKKGAHPPEYIREPDVELFKKFLCEAGGVITKVTLAPEEDQ-----HFELIRHLKDAGIIVSAGHTNATYELA 205 (380)
T ss_pred ecCcCChhhcCCCCHHHhhCcCHHHHHHHHHhcCCCEEEEEECCCCCC-----hHHHHHHHHHCCeEEEeeCCCCCHHHH
Confidence 6777777766666665544 3335555665544566666443333221 235566777777777653333222222
Q ss_pred HHHhhcCCCCchHHHHhhhccCC-------------CC---eeEEEeecCChhhHHHHHhcC-CeEEECccchhhccCCc
Q 012333 252 VVMDTRKVDHGTVTFLDKIEFLQ-------------NN---LLSAHTVWVNHTEIGLLSRAG-VKVSHCPASAMRMLGFA 314 (466)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~---~~~~H~~~~~~~~~~~~~~~g-~~~~~~p~~~~~~~~~~ 314 (466)
......|.. ...+.++.+..+. ++ .+|..|.|++++.++.+.+.. ..-.+.-+..++..+.+
T Consensus 206 ~~a~~~Ga~-~~THlfNaM~~~~hR~pg~vga~l~~~~~~~elI~Dg~Hv~p~~~~~~~r~kg~~~~~lvtDa~~~~g~~ 284 (380)
T TIGR00221 206 KAAFKAGAT-HATHLYNAMSPIHHREPGVIGAVLDHDDVYTEIIADGIHIHPLNIRLAKKLKGDSKLCLVTDSMAAAGAK 284 (380)
T ss_pred HHHHHcCCC-eeeeeccCCCCcCCCCCcHHHHHhcCCCcEEEEEcCCCcCCHHHHHHHHHhcCCCcEEEEeccccccCCC
Confidence 111111110 0111222222111 11 377889999999999987764 21112223333333333
Q ss_pred cHHHHHHcCCcEEE------ccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 315 PIKEMLHADICVSL------GTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 315 ~~~~~~~~gi~~~~------gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
+-...+ .|..+.+ -.|..-.++.+.+...++...- . .+++++++++++|.|||+++|++
T Consensus 285 ~G~y~l-~~~~v~~~~g~~~~~~g~LAGs~ltl~~~v~~l~~--~------------~~~~~~eal~~aT~npA~~lgl~ 349 (380)
T TIGR00221 285 DGVFIF-GGKTVYIREGTCLDSNGTLAGSSLTMIEGARNLVE--F------------TNISLTDAARMSSLNPARALGID 349 (380)
T ss_pred CceEeE-CCEEEEEECCEEEcCCCceechhhhHHHHHHHHHH--h------------hCCCHHHHHHHHhHHHHHHhCCC
Confidence 221111 1222211 1333333344667777665422 1 14999999999999999999997
Q ss_pred CcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccE
Q 012333 389 NDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQ 439 (466)
Q Consensus 389 ~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~ 439 (466)
+++|+|++|++|||+|+|.+ .++..||++|+
T Consensus 350 ~~~G~i~~G~~ADlvv~d~~--------------------~~v~~t~~~G~ 380 (380)
T TIGR00221 350 DRLGSVTVGKDANLVVFTPD--------------------FEVILTIVNGN 380 (380)
T ss_pred CCCcccCCCCcCCEEEECCC--------------------CCEEEEEeCCC
Confidence 66799999999999999998 58999999995
No 81
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=99.96 E-value=7.4e-27 Score=225.45 Aligned_cols=340 Identities=21% Similarity=0.268 Sum_probs=195.7
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|+.|++++. ..+++|+|+||+|++|++....+ ...+.++||++|++|+|||||+|+|+..... .
T Consensus 2 ~~i~~~~v~~~~~----~~~~~v~i~~g~I~~v~~~~~~~---~~~~~~~id~~g~~v~PG~id~H~H~~~~~~-----~ 69 (387)
T cd01308 2 TLIKNAEVYAPEY----LGKKDILIAGGKILAIEDQLNLP---GYENVTVVDLHGKILVPGFIDQHVHIIGGGG-----E 69 (387)
T ss_pred EEEECcEEeCCCC----ccceEEEEECCEEEEEeCCcccc---cCCCCeEEECCCCEEccCeeehhhCcccccC-----C
Confidence 5899999997532 35779999999999999754321 1135689999999999999999999853100 0
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-----cCHH---HHHHHHHHhCCeEEeeccccc
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVS---EMAKAVELLGLRACLVQSTMD 172 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-----~~~~---~~~~~~~~~g~~~~~~~~~~~ 172 (466)
.. ....++. ....+++.+|+||+++++. .... ...++..+.|++.+.....++
T Consensus 70 ~~------------~~~~~~~-------~~~~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv~~v~~~~~~~ 130 (387)
T cd01308 70 GG------------PSTRTPE-------VTLSDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGITCFVYTGSYE 130 (387)
T ss_pred Cc------------ccccCHH-------HHHHHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCCEEEEEecccC
Confidence 00 0011111 1234678999999999862 1122 335555678999887655443
Q ss_pred CCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCC------ccceeccCC
Q 012333 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVAEI 246 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~------~v~~H~~~~ 246 (466)
.. .. ...+.+......++.+... + .. ............+.+.++.+.++..+. .+++|....
T Consensus 131 ~~----~~----~~~~~~~~~~~~i~~~~~~--g-~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~ 198 (387)
T cd01308 131 VP----TR----TITGSIRKDLLLIDKVIGV--G-EI-AISDHRSSQPTVEELARIAAEARVGGLLGGKAGIVHIHLGDG 198 (387)
T ss_pred CC----Cc----CchhhHHHHHHHHHHhcCc--c-eE-EEcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCc
Confidence 21 11 1112222222234443321 1 11 112222234455666777776665332 356666543
Q ss_pred cchhHHHHhhcCCCCchHHHHhhhccCCC-CeeEEEeecCChhh---HHHHHhcCCeEEEC----ccchhhc--cCCccH
Q 012333 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQN-NLLSAHTVWVNHTE---IGLLSRAGVKVSHC----PASAMRM--LGFAPI 316 (466)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~H~~~~~~~~---~~~~~~~g~~~~~~----p~~~~~~--~~~~~~ 316 (466)
...... ..+++...+. .. +.+..|.. .+.+. .....+.|..+.+. |...... .....+
T Consensus 199 ~~~~~~----------i~~~~~~~G~-~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~v~i~~~~~~~~~~~~~~~~~~~l 266 (387)
T cd01308 199 KRALSP----------IFELIEETEI-PITQFLPTHIN-RTAPLFEQGVEFAKMGGTIDLTSSIDPQFRKEGEVRPSEAL 266 (387)
T ss_pred hHHHHH----------HHHHHHhcCC-CcceeECCccc-CCHHHHHHHHHHHHcCCcEEEECCCCccccccCccChHHHH
Confidence 111110 1111222121 11 22233333 34442 23344456543332 2111000 123456
Q ss_pred HHHHHcCC---cEEEccCCCCC---CCC------------CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHh
Q 012333 317 KEMLHADI---CVSLGTDGAPS---NNR------------MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378 (466)
Q Consensus 317 ~~~~~~gi---~~~~gsD~~~~---~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T 378 (466)
+.++++|+ .++++||+... ... ..++..+... +. ..++|++++++++|
T Consensus 267 ~~~~~~g~~~d~i~l~TD~~~~~p~~~~~g~~~~~g~~~~~~~~~~~~~~--v~------------~~~i~~~~al~~~T 332 (387)
T cd01308 267 KRLLEQGVPLERITFSSDGNGSLPKFDENGNLVGLGVGSVDTLLREVREA--VK------------CGDIPLEVALRVIT 332 (387)
T ss_pred HHHHHhCCCCCcEEEEECCCCCcccCccCCeEEecCcCcHHHHHHHHHHH--HH------------hCCCCHHHHHHHHH
Confidence 78889886 37999997321 000 0111222211 11 12499999999999
Q ss_pred HHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeec
Q 012333 379 INGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLL 450 (466)
Q Consensus 379 ~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~ 450 (466)
.|||+++|+++ +|+|++|++|||+|||.+ .++..|+++|++|+++|++...
T Consensus 333 ~npA~~lg~~~-~G~i~~G~~ADlvv~d~~--------------------~~~~~~~~~G~~v~~~~~~~~~ 383 (387)
T cd01308 333 SNVARILKLRK-KGEIQPGFDADLVILDKD--------------------LDINSVIAKGQIMVRNGKLLVK 383 (387)
T ss_pred HHHHHHhCCCC-CCCcCCCCcCCEEEEcCC--------------------CCEEEEEECCEEEEECCeEeec
Confidence 99999999965 799999999999999997 4789999999999999998743
No 82
>PRK07369 dihydroorotase; Provisional
Probab=99.96 E-value=9.7e-28 Score=230.73 Aligned_cols=328 Identities=15% Similarity=0.142 Sum_probs=186.3
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
|.|++|+|++|+++.+ .....++|+|+||+|++|++.... +..+.++||++|++|+|||||+|+|+...
T Consensus 1 ~~~~~i~n~~v~d~~~--~~~~~~~v~I~dg~I~~i~~~~~~----~~~~~~~iDa~G~~vlPG~ID~H~H~~~~----- 69 (418)
T PRK07369 1 MSNELLQQVRVLDPVS--NTDRIADVLIEDGKIQAIEPHIDP----IPPDTQIIDASGLILGPGLVDLYSHSGEP----- 69 (418)
T ss_pred CCCEEEeCeEEECCCC--CcccceeEEEECCEEEEecCCccc----CCCCCEEEECCCCEEecCEEecccccCCC-----
Confidence 5689999999995332 223567999999999999864321 11357899999999999999999998321
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-----CHHHHHHHHHHhC----CeEEeec
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLG----LRACLVQ 168 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-----~~~~~~~~~~~~g----~~~~~~~ 168 (466)
.....+.+ ....+.++.+||||+.+++.. ....+........ +......
T Consensus 70 -------------------~~~~~e~~---~s~~~aa~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~ 127 (418)
T PRK07369 70 -------------------GFEERETL---ASLAAAAAAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPPVQLHFWG 127 (418)
T ss_pred -------------------CcCCCccH---HHHHHHHHhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCceeEEEEE
Confidence 00111111 223466899999999998742 1222222222211 1122111
Q ss_pred ccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcc
Q 012333 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (466)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~ 248 (466)
... .+ .....+.+. ..+.+.+ +..+. ......+...+.+.++.++..+.++.+|+.+...
T Consensus 128 ~~~-~~----------~~~~~~~ei----~~l~~~G---v~~f~--~~~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l 187 (418)
T PRK07369 128 ALT-LG----------GQGKQLTEL----AELAAAG---VVGFT--DGQPLENLALLRRLLEYLKPLGKPVALWPCDRSL 187 (418)
T ss_pred EEe-eC----------CCCccHhhH----HHHHHCC---CEEEE--CCCcCCCHHHHHHHHHHHHhcCCeEEEecCChhh
Confidence 111 00 000011111 2222221 22222 1222345667888899999999999999976432
Q ss_pred hh-------HHHHhhcCCCCch-------HHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCC--eEEECccchhhc-
Q 012333 249 EN-------QVVMDTRKVDHGT-------VTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGV--KVSHCPASAMRM- 310 (466)
Q Consensus 249 ~~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~--~~~~~p~~~~~~- 310 (466)
.. ............. ...+...+..+.+..+.|...- +-+.++.+++.|. ...+||++-..-
T Consensus 188 ~~~~~~~~g~~~~~~~~~~~p~~aE~~av~r~~~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~phhL~l~~ 267 (418)
T PRK07369 188 AGNGVMREGLLALRLGLPGDPASAETTALAALLELVAAIGTPVHLMRISTARSVELIAQAKARGLPITASTTWMHLLLDT 267 (418)
T ss_pred hhcCcccCChhHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEecHHHHhccH
Confidence 11 0000000000001 1223333344555555555431 1244555566664 456888754210
Q ss_pred -------------------cCCccHHHHHHcCCcEEEccCCCCCCCCC---CHHH--------HHHHHHHHhcccccccC
Q 012333 311 -------------------LGFAPIKEMLHADICVSLGTDGAPSNNRM---SIVD--------EMYLASLINKGREVFAN 360 (466)
Q Consensus 311 -------------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~ 360 (466)
.....+++.+..|...+++|||.|+.... +++. +..+...+...
T Consensus 268 ~~~~~~~~~~kv~PPLR~~~d~~aL~~~l~~G~Id~i~SDHaP~~~~~K~~~~~~~~~G~~G~e~~l~~~~~~~------ 341 (418)
T PRK07369 268 EALASYDPNLRLDPPLGNPSDRQALIEGVRTGVIDAIAIDHAPYTYEEKTVAFAEAPPGAIGLELALPLLWQNL------ 341 (418)
T ss_pred HHHhccCCCcEECCCCCCHHHHHHHHHHHhcCCCCEEEcCCCCCCHHHccCCHhHCCCCceeHHHHHHHHHHHH------
Confidence 01124556788899999999999875211 1110 01111111100
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC
Q 012333 361 GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (466)
Q Consensus 361 ~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~ 408 (466)
....+++++++++++|.|||++||+. .|+|++|++|||+++|.+
T Consensus 342 --v~~~~i~l~~~v~~~s~nPA~~lgl~--~G~i~~G~~ADlvi~d~~ 385 (418)
T PRK07369 342 --VETGELSALQLWQALSTNPARCLGQE--PPSLAPGQPAELILFDPQ 385 (418)
T ss_pred --HHcCCCCHHHHHHHHHHhHHHHhCCC--cCcccCCCcCCEEEEcCC
Confidence 01124999999999999999999994 499999999999999987
No 83
>PRK01211 dihydroorotase; Provisional
Probab=99.96 E-value=3e-28 Score=232.33 Aligned_cols=352 Identities=13% Similarity=0.097 Sum_probs=190.8
Q ss_pred EEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCCC
Q 012333 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDV 101 (466)
Q Consensus 22 lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~ 101 (466)
.|.|..+. ++ ....++|.|+||||++|++.. .+.++||++| +|+|||||+|+|+...
T Consensus 2 ~~~~~~~~--~~---~~~~~di~I~dGkI~~i~~~~--------~~~~~ida~g-~vlPG~ID~HvH~r~p--------- 58 (409)
T PRK01211 2 AICGNFYY--KG---KFDYLEIEVEDGKIKSIKKDA--------GNIGKKELKG-AILPAATDIHVHFRTP--------- 58 (409)
T ss_pred eeeceeEE--cC---cEEEEEEEEECCEEEEecCCC--------CCceEEEecc-EEcCCeEEeeeccCCC---------
Confidence 45555544 32 134579999999999998642 2457999999 8999999999998321
Q ss_pred CchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-----CHHHHHHHHHHhCCeEEeecccccCCCC
Q 012333 102 DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLVQSTMDCGEG 176 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (466)
.....+ ......++++.+||||+++|+.. ....+........-...........
T Consensus 59 ---------------g~~~ke---d~~s~s~AAaaGGvTtv~dmPnt~P~~~~~e~~~~~~~~a~~~s~vd~~~~~~--- 117 (409)
T PRK01211 59 ---------------GETEKE---DFSTGTLSAIFGGTTFIMDMPNNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSM--- 117 (409)
T ss_pred ---------------CCcccC---cHHHHHHHHHcCCcEEEEECCCCCCCCChHHHHHHHHHHhccCceeeEEEEec---
Confidence 111111 12234577899999999999742 1222222222222221111111110
Q ss_pred CCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHH----
Q 012333 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV---- 252 (466)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~---- 252 (466)
.... . . +. . +.+...++++..... .........+.++.++..+.++.+|+.+.......
T Consensus 118 ~~~~----~-~-------~~-~---~~g~~~~k~f~~~~~-~~~~~~~~~~~l~~~~~~g~~v~~H~E~~~l~~~~~~~~ 180 (409)
T PRK01211 118 ETGN----N-A-------LI-L---DERSIGLKVYMGGTT-NTNGTDIEGGEIKKINEANIPVFFHAELSECLRKHQFES 180 (409)
T ss_pred cCCc----h-h-------hH-H---hccCcEEEEEcCCCc-CCCccccCHHHHHHHHccCCEEEEeccChHHhhhhhhCc
Confidence 0000 0 0 11 1 112334554432210 00000112234466678899999999764321110
Q ss_pred -HHhhcCCCCch----HHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-----------------
Q 012333 253 -VMDTRKVDHGT----VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM----------------- 310 (466)
Q Consensus 253 -~~~~~~~~~~~----~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~----------------- 310 (466)
........... ..+.....+...+..+.|... .+.+ ..+.+.+||+.-..-
T Consensus 181 ~~~~~~~~~rP~~aE~~ai~~~~~la~~~~hi~HvSt--~~~~-----~~vt~Ev~phhL~l~~~~~~~~~~kvnPPLRs 253 (409)
T PRK01211 181 KNLRDHDLARPIECEIKAVKYVKNLDLKTKIIAHVSS--IDVI-----GRFLREVTPHHLLLNDDMPLGSYGKVNPPLRD 253 (409)
T ss_pred chHhhCCCCCCHHHHHHHHHHHHHHhCCCcEEEEecC--hhhc-----CceEEEecHHHHccccccccCCceeEcCCCCC
Confidence 00111111111 111122222233334444332 2222 245566676643210
Q ss_pred -cCCccHHHHHHcCCcEEEccCCCCCCCC-----------CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHh
Q 012333 311 -LGFAPIKEMLHADICVSLGTDGAPSNNR-----------MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378 (466)
Q Consensus 311 -~~~~~~~~~~~~gi~~~~gsD~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T 378 (466)
.....+++.+..|...+++|||.|+... +.-++.+.... .. .....++|++++++++|
T Consensus 254 ~~d~~aL~~~l~dG~ID~i~SDHaP~~~~eK~~~~~a~~G~~gle~~lpl~-~~---------~v~~~~isl~~~v~~~s 323 (409)
T PRK01211 254 RWTQERLLEEYISGRFDILSSDHAPHTEEDKQEFEYAKSGIIGVETRVPLF-LA---------LVKKKILPLDVLYKTAI 323 (409)
T ss_pred HHHHHHHHHHHhCCCCCEEeCCCCCCChhHhCCHhhCCCCCCcHHHHHHHH-HH---------HHHcCCCCHHHHHHHHH
Confidence 1123456678889999999999986421 11111111111 11 01123599999999999
Q ss_pred HHHHHHcCCCCcccccccCCccCEEEEcCCC-CCCCC-------cCCcccceecccCCCCeeEEEEccEEEEECCeeeec
Q 012333 379 INGAKSVLWDNDIGSLEAGKKADMVVVDPFS-WPMVP-------VHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLL 450 (466)
Q Consensus 379 ~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~-~~~~~-------~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~ 450 (466)
.|||++||| + +|+|++|++|||||||++. |...+ ...|+..+. -. +|..||++|++||+++++.+.
T Consensus 324 ~nPAki~gl-~-kG~l~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~spf~G~~---~~-~v~~tiv~G~~v~~~~~~~~~ 397 (409)
T PRK01211 324 ERPASLFGI-K-KGKIEEGYDADFMAFDFTNIKKINDKRLHSKCPVSPFNGFD---AI-FPSHVIMRGEVVIDNYELISE 397 (409)
T ss_pred HHHHHHhCC-C-CCcccCCCcCCEEEEcCCCeEEEChHHhhccCCCCCCCCCE---ec-cEEEEEECCEEEEECCEEccc
Confidence 999999999 3 6999999999999999983 32211 122322221 12 799999999999999888755
Q ss_pred cHHHHHH
Q 012333 451 MRGRLFQ 457 (466)
Q Consensus 451 ~~~~~~~ 457 (466)
..|+++.
T Consensus 398 ~~G~~~~ 404 (409)
T PRK01211 398 RTGKFVP 404 (409)
T ss_pred cCceEec
Confidence 4566553
No 84
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=99.96 E-value=3.4e-27 Score=223.43 Aligned_cols=352 Identities=16% Similarity=0.142 Sum_probs=204.1
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|++++ ..+.+.+|+|+||+|++|++.... + .+.++||++|++|+|||||+|+|.+...
T Consensus 2 ~~i~n~~i~~~~---~~~~~~~v~IedgkI~~I~~~~~~----~-~~~~~ID~~G~~l~PG~ID~HvHG~~g~------- 66 (382)
T PRK11170 2 YALTNGRIYTGH---EVLDDHAVVIADGLIEAVCPVAEL----P-PGIEQRDLNGAILSPGFIDLQLNGCGGV------- 66 (382)
T ss_pred EEEEeeEEECCC---CeEeCCEEEEECCEEEEecCCccC----C-CCCeEEeCCCCEEccceeeeeecCccCc-------
Confidence 679999999643 456677999999999999875322 1 2457999999999999999999974210
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-CHHHH---HHHHHH-hCCeEEeecccccCCC
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEM---AKAVEL-LGLRACLVQSTMDCGE 175 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-~~~~~---~~~~~~-~g~~~~~~~~~~~~~~ 175 (466)
++ .........+ ......+.++++|||++.+.... ....+ .+.... ..........+..+++
T Consensus 67 -~~---------~~~~~~~~~~---~l~~~~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~~a~~~G~HlEGP 133 (382)
T PRK11170 67 -QF---------NDTAEAISVE---TLEIMQKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKHPNQALGLHLEGP 133 (382)
T ss_pred -cc---------ccCccCCCHH---HHHHHHHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcCCCeEEEEEeecC
Confidence 00 0000001111 22233355799999999885422 22222 222222 1111223344555677
Q ss_pred CCCcccccCChHHHHH-HHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHH
Q 012333 176 GLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (466)
Q Consensus 176 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (466)
++++........+.+. ...+.++.+.+.. +.++...-.+... . .++++.+.+.|+.+++-.....++.....
T Consensus 134 fi~~~~~Gah~~~~~~~p~~~~~~~~~~~~-~~i~~iTlAPE~~--~----~~~i~~l~~~gi~vs~GHs~A~~~~~~~a 206 (382)
T PRK11170 134 YLNLVKKGTHNPEFIRKPDAEMVDFLCENA-DVITKVTLAPEMV--D----AEVIRKLVEAGIVVSAGHSNATYEEAKAG 206 (382)
T ss_pred CCCcccCCCCCHHHhcCcCHHHHHHHHhcc-CCEEEEEECCCCC--c----HHHHHHHHHCCcEEEeeCCcCCHHHHHHH
Confidence 7777666555555543 2234455555443 3455433333321 1 25677788888888774444333322211
Q ss_pred hhcCCCCchHHHHhhhccCC-------------CC---eeEEEeecCChhhHHHHHhcCCeEEECccchhhccCCccHHH
Q 012333 255 DTRKVDHGTVTFLDKIEFLQ-------------NN---LLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKE 318 (466)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~-------------~~---~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~ 318 (466)
...|.. ...+.++.+..+. ++ .+|..+.|+.++.++.+.+..-.-.+.-+..++..+.++-..
T Consensus 207 ~~~Ga~-~~THlfNaM~~~~hR~pg~vga~l~~~~~~~elI~Dg~Hv~p~~~~~~~~~k~~~~~lvtDa~~~~G~~~g~y 285 (382)
T PRK11170 207 FRAGIT-FATHLYNAMPYITGREPGLVGAILDEPDVYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQF 285 (382)
T ss_pred HHcCCC-EEeeccccCCcccCCCcchhhHhhcCCCcEEEEEcCcccCCHHHHHHHHHhcCCcEEEEeccccCCCCCCCeE
Confidence 111111 0111222222111 11 378889999999999886664221112233333333221211
Q ss_pred HHHcCCcEEE------ccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCccc
Q 012333 319 MLHADICVSL------GTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (466)
Q Consensus 319 ~~~~gi~~~~------gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G 392 (466)
.+ .|..+.+ -.|....++...+...++..... .+++++++++++|.|||+.+|+++++|
T Consensus 286 ~l-~~~~v~v~~g~~~~~~G~LAGs~l~l~~~v~~l~~~--------------~~~~~~eal~~aT~npA~~lgl~~~~G 350 (382)
T PRK11170 286 IF-AGKTIYYRDGLCVDENGTLSGSALTMIEAVRNLVEH--------------VGIALDEALRMATLYPARAIGVDKRLG 350 (382)
T ss_pred EE-CCEEEEEECCEEECCCCcccccHhHHHHHHHHHHHh--------------cCCCHHHHHHHHHHHHHHHhCCCCCcc
Confidence 11 1222221 12333333456677777765321 259999999999999999999977789
Q ss_pred ccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEE
Q 012333 393 SLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 443 (466)
Q Consensus 393 ~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 443 (466)
+|++|++|||+|||.+ .++..||++|++++.
T Consensus 351 ~i~~G~~ADlvvld~~--------------------~~v~~v~~~G~~~~~ 381 (382)
T PRK11170 351 SIEAGKVANLTAFTRD--------------------FKITKTIVNGNEVVT 381 (382)
T ss_pred ccCCCCcCCEEEECCC--------------------CcEEEEEECCEEeec
Confidence 9999999999999987 589999999998874
No 85
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.96 E-value=1.2e-26 Score=222.68 Aligned_cols=129 Identities=19% Similarity=0.108 Sum_probs=83.4
Q ss_pred HHcCCcEEEccCCCCCCCCCCHHHHHHHH--------HHH--hc-ccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 320 LHADICVSLGTDGAPSNNRMSIVDEMYLA--------SLI--NK-GREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 320 ~~~gi~~~~gsD~~~~~~~~~~~~~~~~~--------~~~--~~-~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
.+...++.+.||||..++......-+++. .+- .+ ........ .....+|++++++++|.+||++||+.
T Consensus 372 ~~dp~~~~~ttDhPnggpf~~YP~ii~~lm~~~~r~~~~~~~~~~~~~~~~l~-~~~Re~sL~EI~~mtTanPAkaLGL~ 450 (556)
T TIGR03121 372 IKDPWRVFLTTDHPNGGPFTRYPRIIALLMSRKYREDMLSTVHPWAAARSTLG-GIDREYSLYEIAIMTRAGPAKLLGLT 450 (556)
T ss_pred cCCcceeEEeccCCCCCcccchHHHHHHHcCHHHHHHHHHhcCHHHHhhcccc-cccCCCCHHHHHHHHHHHHHHHhCCC
Confidence 45667899999998765543333332221 110 00 00000001 12246999999999999999999996
Q ss_pred CcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHH
Q 012333 389 NDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRL 455 (466)
Q Consensus 389 ~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~ 455 (466)
++|+|++|++|||+|+|.+.....+ +...+. .. ...+++||++|++|+++|+++....|+.
T Consensus 451 -dkG~L~pGa~ADIaI~D~~~~~~~~---~~~~v~-~~-~~~v~~Tik~G~vV~~dGei~~~~~G~~ 511 (556)
T TIGR03121 451 -DRGHLGVGADADIAVYDINPDDVDT---DYADVE-KA-FSTALYVFKDGEIVVKDGEIVETPWGRT 511 (556)
T ss_pred -CCCCcCCCCcCCEEEEeCcccccCC---chHHHh-hc-cCCccEEEECCEEEEECCEEccCCCCcE
Confidence 4699999999999999987322211 111111 11 2579999999999999998876644443
No 86
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.96 E-value=7.1e-27 Score=200.12 Aligned_cols=319 Identities=18% Similarity=0.184 Sum_probs=190.4
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
++.|++++|++++++- ...-+-.+|.|.||||+++++ ...+ ..+++||++|++|.||+||.|+|.+.....
T Consensus 2 mqfdiLLt~~rlidpa--~g~d~~tniai~ngkIaa~~d-~~ap-----a~tq~Ida~Gc~VspG~iDlHvHvy~ggt~- 72 (386)
T COG3964 2 MQFDILLTGGRLIDPA--RGIDEITNIAIINGKIAAADD-YPAP-----AETQIIDADGCIVSPGLIDLHVHVYYGGTE- 72 (386)
T ss_pred CccceeeeCCeecccc--cccCccceeeeecCeEEeccC-cCCC-----hhheEEccCccEeccCeeeeeeEEecCCCc-
Confidence 4689999999999532 234455699999999999994 3221 247899999999999999999998642211
Q ss_pred ccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC---HHHHHHHHHHh-CCeEEeeccccc
Q 012333 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELL-GLRACLVQSTMD 172 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~---~~~~~~~~~~~-g~~~~~~~~~~~ 172 (466)
.--.++.+ ....||||++|.|+.. ...+.+...+. -.|+.....+..
T Consensus 73 --------------------~~v~pd~~---------ga~~GvTTvVDAGSaGaanf~gF~r~vie~Sr~RI~Aflnvs~ 123 (386)
T COG3964 73 --------------------GGVRPDMY---------GAPNGVTTVVDAGSAGAANFDGFYRTVIEASRVRIKAFLNVSP 123 (386)
T ss_pred --------------------cCcCHHHc---------cccCCceEEEecCCcCccchhhHHHHhhcchhheeeeeeeccC
Confidence 11112221 5689999999987543 33333333322 122222111111
Q ss_pred CCC-CCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEee--cccccCCHHHHHHHHHHHHHcCCccceeccCCcch
Q 012333 173 CGE-GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI--RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (466)
Q Consensus 173 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (466)
.|. +.+..+..... ..+...+.+++..+.- -.+++-... -+.+..++ ++...+.++..++|+++|..+.+..
T Consensus 124 ~Gl~a~nE~~d~~ni--d~d~i~aa~reh~d~i-vGlKvR~s~~~~g~~GitP--l~la~~ia~~~klPlmvHigePp~~ 198 (386)
T COG3964 124 PGLTASNELYDPDNI--DEDKIHAAFREHRDVI-VGLKVRVSTEDIGEYGITP--LTLALRIANDLKLPLMVHIGEPPVL 198 (386)
T ss_pred cceeeehhhCChhhC--CHHHHHHHHHhCcCcE-EEEEEEeeeccccccCCch--HHHHHHHHhhcCCceEEecCCCCcc
Confidence 111 11111111111 1123444454443221 112221211 12233333 5666788899999999999885543
Q ss_pred hHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh-----------hhHHHHHhcCCeEEECccchhhccCCccHHH
Q 012333 250 NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKE 318 (466)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-----------~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~ 318 (466)
.... .+.+.+..++.||..--+ ..+++++++|+.+..-.-.. ...+.-.++
T Consensus 199 ~dEv----------------lerL~~GDIitHcfngkpn~~l~~dg~vr~~vrra~erGV~fD~ghG~a--sfsf~vAr~ 260 (386)
T COG3964 199 MDEV----------------LERLRRGDIITHCFNGKPNTILTDDGVVRAEVRRARERGVIFDAGHGRA--SFSFNVARR 260 (386)
T ss_pred HHHH----------------HHhccCCceeeeeccCCCCCccccchhHHHHHHHHHhcceEEEccCCcc--eeeHHHHHH
Confidence 3322 233445567888876322 44778888888776542211 012234577
Q ss_pred HHHcCC-cEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccC
Q 012333 319 MLHADI-CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAG 397 (466)
Q Consensus 319 ~~~~gi-~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G 397 (466)
++..|+ +..|+||-...+ .++ +.....+..++|.. .-++++.+.++++|.|||..+++. .+|+|+||
T Consensus 261 aia~GllP~~ISSDlh~~~-~~n-~Pv~dla~~mSKll---------algmpl~~Vi~avT~npA~~i~l~-~~gtLa~G 328 (386)
T COG3964 261 AIANGLLPDIISSDLHTIT-KLN-GPVYDLAWIMSKLL---------ALGMPLTDVINAVTHNPAVLIGLA-EIGTLAPG 328 (386)
T ss_pred HHhcCCCcceeeccceeee-ecC-chHHHHHHHHHHHH---------HcCCcHHHHHHHHhcCHHHHhCcc-ccCccCCC
Confidence 888885 689999975432 011 12222233333321 225999999999999999999995 78999999
Q ss_pred CccCEEEEcCC
Q 012333 398 KKADMVVVDPF 408 (466)
Q Consensus 398 ~~ADlvv~d~~ 408 (466)
..|||+||+-.
T Consensus 329 ~~aD~tvf~lk 339 (386)
T COG3964 329 AFADITVFKLK 339 (386)
T ss_pred cccceEEEEec
Confidence 99999999876
No 87
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=99.96 E-value=3.4e-27 Score=228.20 Aligned_cols=343 Identities=18% Similarity=0.166 Sum_probs=189.0
Q ss_pred eceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCCCCchHhhhhccccccCCC
Q 012333 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (466)
Q Consensus 39 ~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (466)
..++|+|+||+|++|++.. . + .+.++||++|++|+|||||+|+|+... ..
T Consensus 4 ~~~~v~I~~g~I~~i~~~~-~----~-~~~~~ida~g~~v~PG~ID~H~H~~~~------------------------~~ 53 (411)
T TIGR00857 4 TEVDILVEGGRIKKIGKLR-I----P-PDAEVIDAKGLLVLPGFIDLHVHLRDP------------------------GE 53 (411)
T ss_pred EEEEEEEECCEEEEeeccC-C----C-CCCeEEECCCCEEecCEEEcccCCCCC------------------------CC
Confidence 4569999999999997421 1 1 255799999999999999999998310 00
Q ss_pred ChhHHHHHHHHHHHHHHhcCceeeeecCcc-----CHHHHHHHHHHhC----CeEEeecccccCCCCCCcccccCChHHH
Q 012333 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLG----LRACLVQSTMDCGEGLPASWAVRTTDDC 189 (466)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-----~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (466)
.. ..........++.+|||++++++.. ....+........ ......... ... .....
T Consensus 54 ~~---~~~~~~~~~~~~~~GvTtv~~~~~t~p~~~~~~~l~~~~~~~~~~~~vd~~~~~~~-------~~~----~~~~~ 119 (411)
T TIGR00857 54 EY---KEDIESGSKAAAHGGFTTVADMPNTKPPIDTPETLEWKLQRLKKVSLVDVHLYGGV-------TQG----NQGKE 119 (411)
T ss_pred cc---HhHHHHHHHHHHhCCeEEEEEecCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEE-------ecC----Ccccc
Confidence 00 1122233456899999999997532 1222222222211 111111111 100 00011
Q ss_pred HHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh-------hcCCCCc
Q 012333 190 IQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD-------TRKVDHG 262 (466)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~-------~~~~~~~ 262 (466)
+.+..+ +.+. +.+...+.....+..++..+.++++.+++++.++.+|+.+.......... .+.....
T Consensus 120 l~e~~~----l~~~--Gv~g~~f~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~g~~~~~~~~~~~p 193 (411)
T TIGR00857 120 LTEAYE----LKEA--GAVGRMFTDDGSEVQDILSMRRALEYAAIAGVPIALHAEDPDLIYGGVMHEGPSAAQLGLPARP 193 (411)
T ss_pred HHHHHH----HHHC--CcEEEEEEeCCcccCCHHHHHHHHHHHHHcCCEEEEecCCHHHHhhhhhcCCcccHhhCCCCCC
Confidence 122222 2121 22221111122234577889999999999999999999764321111000 0000000
Q ss_pred -------hHHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcC--CeEEECccchhhc--------------------cC
Q 012333 263 -------TVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAG--VKVSHCPASAMRM--------------------LG 312 (466)
Q Consensus 263 -------~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g--~~~~~~p~~~~~~--------------------~~ 312 (466)
....+......+.+..+.|...- +-+.++.+++.| +.+.+||++...- ..
T Consensus 194 ~~aE~~ai~~~~~la~~~~~~~~i~Hvs~~~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~~~~~~k~~Pplr~~~~ 273 (411)
T TIGR00857 194 PEAEEVAVARLLELAKHAGCPVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGKVNPPLREKED 273 (411)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHHHcCCcEEEeechhhheecHHHHhCCCccEEEcCCCCCHHH
Confidence 11122222233445555555441 114455556666 4456777543200 11
Q ss_pred CccHHHHHHcCCcEEEccCCCCCCCCCC---HHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 012333 313 FAPIKEMLHADICVSLGTDGAPSNNRMS---IVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATING 381 (466)
Q Consensus 313 ~~~~~~~~~~gi~~~~gsD~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~ 381 (466)
...+.+.+..|...+++|||.|...... ++. +.....+.... ...+++++++++++|.+|
T Consensus 274 ~~~L~~~l~~g~i~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~---------~~~~~~~~~~~~~~t~~p 344 (411)
T TIGR00857 274 RLALIEGLKDGIIDIIATDHAPHTLEEKTKEFAAAPPGIPGLETALPLLLQLL---------VKGLISLKDLIRMLSINP 344 (411)
T ss_pred HHHHHHHHhcCCCcEEEcCCCCCChHHccCCHhhCCCCceeHHHHHHHHHHHH---------HhCCCCHHHHHHHHhHHH
Confidence 2346678899999999999988642110 110 01111111110 112499999999999999
Q ss_pred HHHcCCCCcccccccCCccCEEEEcCCCCCCCCc--------CCcccceecccCCCCeeEEEEccEEEEEC
Q 012333 382 AKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HDRITSLVYCMRTENVVSVMCNGQWVMKN 444 (466)
Q Consensus 382 A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~~~~~~~~~v~~v~v~G~~v~~~ 444 (466)
|+++|+.+ +|+|++|++|||+++|.+.....+. .+|+..... ..+|..|+++|++||+|
T Consensus 345 a~~~g~~~-~G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~sp~~g~~~---~g~v~~tiv~G~~v~~~ 411 (411)
T TIGR00857 345 ARIFGLPD-KGTLEEGNPADITVFDLKKEWTINAETFYSKAKNTPFEGMSL---KGKPIATILRGKVVYED 411 (411)
T ss_pred HHHhCCCC-CCccCCCCcCCEEEEcCCCCEEEchHHCccCCCCCCcCCCEE---EeEEEEEEECCEEEecC
Confidence 99999954 4999999999999999883211111 112221111 23799999999999975
No 88
>PRK04250 dihydroorotase; Provisional
Probab=99.96 E-value=1.4e-26 Score=221.32 Aligned_cols=346 Identities=14% Similarity=0.169 Sum_probs=182.4
Q ss_pred ccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCCCCch
Q 012333 25 NAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLM 104 (466)
Q Consensus 25 n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~ 104 (466)
+++|++.+ .+ ..++|+|+||+|++|++.. . ++.++||++|++|+|||||+|+|+...
T Consensus 3 ~~~v~~~~---~~-~~~~i~i~~G~I~~i~~~~-~------~~~~~iD~~g~~v~PG~ID~HvH~~~~------------ 59 (398)
T PRK04250 3 EGKFLLKG---RI-VEGGIGIENGRISKISLRD-L------KGKEVIKVKGGIILPGLIDVHVHLRDF------------ 59 (398)
T ss_pred eEEEEECC---cE-EEEEEEEECCEEEEeeCCC-C------CCCeEEECCCCEEccCEEeccccccCC------------
Confidence 56777632 22 3679999999999997411 1 255899999999999999999998210
Q ss_pred HhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-----HHHHHHHHHHhCCeEEeecccccCCCCCCc
Q 012333 105 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (466)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 179 (466)
.... ........+.++.+|||++.+++... ...+........-+......... . .
T Consensus 60 ------------~~~~---~e~~~~~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~-~---~- 119 (398)
T PRK04250 60 ------------EESY---KETIESGTKAALHGGITLVFDMPNTKPPIMDEKTYEKRMRIAEKKSYADYALNF-L---I- 119 (398)
T ss_pred ------------CCCc---HHHHHHHHHHHHhCCeEEEEECCCCCCCCCcHHHHHHHHHHhCcCceeeEEEEE-e---c-
Confidence 0011 11223345678999999999987432 22222222222222211111110 0 0
Q ss_pred ccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCC
Q 012333 180 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~ 259 (466)
..+. .+..+. .. ..++.++.... .....+.+... .+ +.+..+.+|+.+...... ..+.
T Consensus 120 ---~~~~----~~l~~l----~~---~~~k~f~~~~~-~~~~~~~~~~~--~~-~~~~~v~~H~E~~~~~~~----~~~~ 177 (398)
T PRK04250 120 ---AGNC----EKAEEI----KA---DFYKIFMGAST-GGIFSENFEVD--YA-CAPGIVSVHAEDPELIRE----FPER 177 (398)
T ss_pred ---CCCH----HHHHHH----Hh---hheEEEEecCC-CchhHHHHHHH--HH-hcCCeEEEEecChhhhhc----ccCC
Confidence 0011 111111 11 12333322211 11111122211 22 234468888865332110 0000
Q ss_pred CC-----chHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcC---CeEEECccchhhc----------cCCccH-----
Q 012333 260 DH-----GTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG---VKVSHCPASAMRM----------LGFAPI----- 316 (466)
Q Consensus 260 ~~-----~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g---~~~~~~p~~~~~~----------~~~~~~----- 316 (466)
.. .....+......+.+..+.|.. +.+.++.+++.| +.+.+||++-..- .-.+|+
T Consensus 178 p~~aE~~av~r~~~la~~~~~~lhi~HvS--t~~~~~~i~~~g~~~vt~Ev~ph~L~l~~~~~~~~~~~k~~PPLR~~~d 255 (398)
T PRK04250 178 PPEAEVVAIERALEAGKKLKKPLHICHIS--TKDGLKLILKSNLPWVSFEVTPHHLFLTRKDYERNPLLKVYPPLRSEED 255 (398)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCEEEEeCC--CHHHHHHHHHcCCCcEEEEeCHHHhccCHHHHCCCCceEEcCCCCCHHH
Confidence 00 0111222223334444444443 245566666655 4456777643210 011233
Q ss_pred ----HHHHHcCCcEEEccCCCCCC--------CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 012333 317 ----KEMLHADICVSLGTDGAPSN--------NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (466)
Q Consensus 317 ----~~~~~~gi~~~~gsD~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~ 384 (466)
++.+. ...+++|||.|+. +++.-++.+.... ... .....+|++++++++|.|||++
T Consensus 256 ~~aL~~~l~--~Id~i~sDHaP~~~~~k~~~~~G~~g~e~~lpl~-~~~---------v~~~~lsl~~~v~~~t~npAk~ 323 (398)
T PRK04250 256 RKALWENFS--KIPIIASDHAPHTLEDKEAGAAGIPGLETEVPLL-LDA---------ANKGMISLFDIVEKMHDNPARI 323 (398)
T ss_pred HHHHHHhhc--cCCEEEcCCcccCHHHhhcCCCCcchHHHHHHHH-HHH---------HHhcCCCHHHHHHHHHHHHHHH
Confidence 23333 3678999999873 1222222221111 111 1122499999999999999999
Q ss_pred cCCCCcccccccCCccCEEEEcCCCCCCCCc--------CCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHH
Q 012333 385 VLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGR 454 (466)
Q Consensus 385 lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~ 454 (466)
+|+. .+| |++|++|||+|+|++.....+. .+|+..... ..+|..||++|++||++|++++...|+
T Consensus 324 lgl~-~~G-L~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~sp~~g~~l---~g~v~~tiv~G~~v~~~g~~~~~~~G~ 396 (398)
T PRK04250 324 FGIK-NYG-IEEGNYANFAVFDMKKEWTIKAEELYTKAGWTPYEGFKL---KGKVIMTILRGEVVMEDDEIIGKPRGV 396 (398)
T ss_pred hCCC-CcC-ccCCCcCCEEEEcCCCcEEEChhhccccCCCCCCCCCEE---eeEEEEEEECCEEEEECCEEcCCCCCe
Confidence 9994 579 9999999999999983221111 122222211 247999999999999999987655444
No 89
>PRK10027 cryptic adenine deaminase; Provisional
Probab=99.96 E-value=1.2e-26 Score=228.29 Aligned_cols=334 Identities=16% Similarity=0.186 Sum_probs=194.1
Q ss_pred cccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccc
Q 012333 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~ 95 (466)
..+.|++|+|++|++... +. +..++|+|++|+|++|++.... . .+.++||++|++|+|||||+|+|+..
T Consensus 27 ~~~~dllI~ng~vv~~~~-~~-~~~~~V~I~~GrI~~Vg~~~~~----~-~~~~vIDa~G~~v~PGlIDaHvHies---- 95 (588)
T PRK10027 27 DAVADYIIDNVSILDLIN-GG-EISGPIVIKGRYIAGVGAEYAD----A-PALQRIDARGATAVPGFIDAHLHIES---- 95 (588)
T ss_pred CCCCCEEEECcEEEeCCC-Cc-EEeeEEEEECCEEEEeCCCCCC----C-CCCeEEECCCCEEEECeEeccccCCc----
Confidence 346789999999996432 23 3457999999999999764321 1 24689999999999999999999932
Q ss_pred cccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc--------CHHHHHHHHHHhCCeEEee
Q 012333 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLV 167 (466)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~--------~~~~~~~~~~~~g~~~~~~ 167 (466)
.+...+.+.. .++.+||||+++++.. ....+.+.....++..+..
T Consensus 96 ---------------------s~~~p~~~a~------aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~p~~~~~~ 148 (588)
T PRK10027 96 ---------------------SMMTPVTFET------ATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQ 148 (588)
T ss_pred ---------------------ccCCHhHHHH------HHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhCCCeeEEe
Confidence 2222233322 3789999999985422 2333444555566665543
Q ss_pred cccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCc
Q 012333 168 QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (466)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 247 (466)
.... .+..+ ++-.....-..++..++++.-. --.+.-.+..++....+++.+.++.. + .+.++.-|+-...
T Consensus 149 ~ps~--vpa~~-~~Et~Ga~~~~~~~~~~l~~~~---v~glgEvMn~~~V~~~d~~~~~ki~~-~--~~~~idGH~p~l~ 219 (588)
T PRK10027 149 VSSC--VPALE-GCDVNGASFTLEQMLAWRDHPQ---VTGLAEMMDYPGVISGQNALLDKLDA-F--RHLTLDGHCPGLG 219 (588)
T ss_pred eccc--CcCCc-ccccCCCcCCHHHHHHHhcCCC---ceeEEeccCccccccCCHHHHHHHHH-h--CCCceECCCCCCC
Confidence 3221 11111 0100000011122233332100 01111123345555567777777774 3 7888888875322
Q ss_pred chhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhccCCccHHHHHHc-C-Cc
Q 012333 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-IC 325 (466)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~-g-i~ 325 (466)
.. ....+...+.. ..|-. .+.++...-.+.|+.+.+.-.+..+ ....+..++.. . -.
T Consensus 220 g~-------------~L~ay~aaGi~-----sDHE~-~t~eea~eklr~Gm~v~iRegS~~~--nl~~l~~~~~~~~~~~ 278 (588)
T PRK10027 220 GK-------------ELNAYIAAGIE-----NCHES-YQLEEGRRKLQLGMSLMIREGSAAR--NLNALAPLINEFNSPQ 278 (588)
T ss_pred hH-------------HHHHHHHcCCC-----CCccc-CCHHHHHHHHHCCCEEEEeCCcccc--CHHHHHHHhhccCCCe
Confidence 11 12222222221 22433 3566666666789988876544322 12222233322 1 35
Q ss_pred EEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEE
Q 012333 326 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVV 405 (466)
Q Consensus 326 ~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~ 405 (466)
++++||..... ++...-+....+.+.. ...++++++|++++|.|||+++|++ ++|+|++|+.|||+++
T Consensus 279 ~~l~TDd~~~~---~l~~~Ghi~~~vr~av--------~~~Gi~~~~Ai~mAT~nPA~~lgl~-d~G~IapG~~ADlvvl 346 (588)
T PRK10027 279 CMLCTDDRNPW---EIAHEGHIDALIRRLI--------EQHNVPLHVAYRVASWSTARHFGLN-HLGLLAPGKQADIVLL 346 (588)
T ss_pred EEEEcCCCChH---HHHhccCHHHHHHHHH--------HHcCCCHHHHHHHHHHHHHHHcCCC-CCcccCCCCcCCEEEE
Confidence 78999975321 1211111111111100 1135999999999999999999996 4799999999999999
Q ss_pred cCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeee
Q 012333 406 DPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 448 (466)
Q Consensus 406 d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 448 (466)
|.. ...++..||++|++|+++ ++.
T Consensus 347 d~l------------------~~~~v~~v~~~G~~v~~~-~~~ 370 (588)
T PRK10027 347 SDA------------------RKVTVQQVLVKGEPIDAQ-TLQ 370 (588)
T ss_pred ccC------------------CCceEEEEEECCEEeecc-ccc
Confidence 964 124789999999999997 643
No 90
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.95 E-value=4.8e-26 Score=217.45 Aligned_cols=125 Identities=18% Similarity=0.080 Sum_probs=81.9
Q ss_pred HHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccc------------cccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 319 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE------------VFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 319 ~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
+++....+.++||||..++......-++..+ ..+.+. ..... .....+|++++++++|.+||++||
T Consensus 368 l~~dp~~~~~tTDhPn~gpf~~YP~~i~~lm-~~~~r~~~~~~~~~~~~~~~~l~-~~~reLSLeei~~mtT~nPAKiLG 445 (541)
T cd01304 368 LIDDPWKVILTTDHPNGGPFTRYPRIIAWLM-SKKFRAEEIATLHKWAQDRSALP-GIDREYSLYEIAIMTRAGPAKLLG 445 (541)
T ss_pred HhCCcceEEeecCCCCCCCcccHHHHHHHHh-CHHHHHHHHHhcCHHHHhhcccc-CCCCCCCHHHHHHHHHHHHHHHhC
Confidence 3456678999999986654333333333221 011111 00001 122359999999999999999999
Q ss_pred CCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeec
Q 012333 387 WDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLL 450 (466)
Q Consensus 387 l~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~ 450 (466)
+. ++|+|++|++|||+|+|.+..+..+. +..+. .. -..+|..||++|++|+++|+++..
T Consensus 446 L~-~kG~L~~G~~ADLvIfD~n~~~v~~~-dl~s~--~~-~~gkV~~Tiv~GkvVv~dGeiv~~ 504 (541)
T cd01304 446 LS-DKGHLGVGADADIAIYDDDPDQVDPS-DYEKV--EK-AFSRAAYVLKDGEIVVKDGEVVAE 504 (541)
T ss_pred CC-CCCccCCCCcCCEEEEeCCcCccCch-hhcCc--ee-ecCcEEEEEECCEEEEECCEEccC
Confidence 95 57999999999999999885433221 21111 11 135799999999999999877644
No 91
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=99.95 E-value=5e-27 Score=213.94 Aligned_cols=256 Identities=20% Similarity=0.278 Sum_probs=192.1
Q ss_pred EEeecccccccCCcccccccccCCCCchHhh---hhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc---CH
Q 012333 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWL---HDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HV 150 (466)
Q Consensus 77 ~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~---~~ 150 (466)
+|+|||||+|+|+.++.+|+...+.++.+|+ .++.|+.+..+++++.+......+.+++++||||+.|+... ..
T Consensus 1 ~v~PG~vn~H~H~~~~~~rg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~ 80 (263)
T cd01305 1 ILIPALVNAHTHLGDSAIKEVGDGLPLDDLVAPPDGLKHRLLAQADDRELAEAMRKVLRDMRETGIGAFADFREGGVEGI 80 (263)
T ss_pred CccccceeccccHHHHHhhcCCCCCcHHHHhcCcccchHHHHHhCCHHHHHHHHHHHHHHHHhcCCeEEEEccCcchhHH
Confidence 5899999999999999999998888888865 44556777889999999999899999999999999997532 34
Q ss_pred HHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHH
Q 012333 151 SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRD 230 (466)
Q Consensus 151 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ 230 (466)
+.+.++..+.|+|. ...++. +. . ....+ + +.+ +...++++.+..++ ++++++
T Consensus 81 ~a~~~a~~~~g~r~---~~~~~~----~~-~-----~~~~~---~-~~~--------~~~~~~~~~~~~~~---l~~~~~ 132 (263)
T cd01305 81 ELLRRALGKLPVPF---EVILGR----PT-E-----PDDPE---I-LLE--------VADGLGLSSANDVD---LEDILE 132 (263)
T ss_pred HHHHHHHHhcCCCc---eEEecc----CC-c-----chHHH---H-HHh--------hcccccCCCCCccC---HHHHHH
Confidence 56778888899984 111111 10 0 01111 1 111 11125555555555 899999
Q ss_pred HHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc
Q 012333 231 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM 310 (466)
Q Consensus 231 ~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~ 310 (466)
+|+++|+++++|+.+...+. +...++.+... +.+ .+.|+.++++++++++++.|+.+++||.+++..
T Consensus 133 ~A~~~g~~v~~H~~e~~~~~---------g~~~i~~~~~~---~~~-~i~H~~~l~~~~~~~la~~g~~v~~~P~sn~~l 199 (263)
T cd01305 133 LLRRRGKLFAIHASETRESV---------GMTDIERALDL---EPD-LLVHGTHLTDEDLELVRENGVPVVLCPRSNLYF 199 (263)
T ss_pred HHHHCCCeeEEecCCCCCCC---------CchhHHHHHhC---CCC-EEEEcCCCCHHHHHHHHHcCCcEEEChhhHHHh
Confidence 99999999999998865432 11123333332 333 479999999999999999999999999998876
Q ss_pred -cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 012333 311 -LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (466)
Q Consensus 311 -~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~ 384 (466)
.+.+|++++++.|+++++|||.... ...+++.+++.+....+.. ..+++.++++++|.|+|++
T Consensus 200 ~~g~~p~~~l~~~Gv~v~lGtD~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 200 GVGIPPVAELLKLGIKVLLGTDNVMV-NEPDMWAEMEFLAKYSRLQ----------GYLSPLEILRMATVNAAEF 263 (263)
T ss_pred CCCCCCHHHHHHCCCcEEEECCCCcc-CCCCHHHHHHHHHHHhccc----------ccCCHHHHHHHHhhccccC
Confidence 6789999999999999999998654 3568999999887655421 1379999999999999974
No 92
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.95 E-value=8.5e-27 Score=222.34 Aligned_cols=339 Identities=24% Similarity=0.232 Sum_probs=192.7
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|+++ ....+.+|.|++|+|+.|++.... + ...++||++|++|+|||||+|+|.....
T Consensus 1 ~~i~~~~v~~~----~~~~~~~i~i~~g~I~~i~~~~~~----~-~~~~vid~~g~~l~PG~iD~H~H~~~g~------- 64 (374)
T cd00854 1 LIIKNARILTP----GGLEDGAVLVEDGKIVAIGPEDEL----E-EADEIIDLKGQYLVPGFIDIHIHGGGGA------- 64 (374)
T ss_pred CEEEeEEEeCC----CEEcccEEEEECCEEEEecCCCCc----c-cCCcEEECCCCEecccEEEeeecccCCC-------
Confidence 47999999953 345678999999999999875432 1 2457999999999999999999984210
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-HHHHH---HHHH---Hh--CCeEEeecccc
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMA---KAVE---LL--GLRACLVQSTM 171 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-~~~~~---~~~~---~~--g~~~~~~~~~~ 171 (466)
.... . ..+ ......+.++++|||+++++.... ...+. .... +. |.+.+- +.
T Consensus 65 ------------~~~~-~-~~e---~~~~~~~~~~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~g~~~~g---~h 124 (374)
T cd00854 65 ------------DFMD-G-TAE---ALKTIAEALAKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQGAEILG---IH 124 (374)
T ss_pred ------------CCCC-C-CHH---HHHHHHHHHHccCcceeeccccCCCHHHHHHHHHHHHHHhhcCCCCeeEE---Ee
Confidence 0000 0 112 222345668999999999976222 22211 1111 11 223221 12
Q ss_pred cCCCCCCcccccCChHHHH-HHHHHHHHHhccCCCCCeEEEEeecccccCCHHHH--HHHHHHHHHcCCccc-eeccCCc
Q 012333 172 DCGEGLPASWAVRTTDDCI-QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLL--LETRDMAREFKTGIH-MHVAEIP 247 (466)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l--~~~~~~a~~~~~~v~-~H~~~~~ 247 (466)
..++.+++..........+ ....+.++++...+.+.++.+. ..+|.. .++++.++++|+.+. -|.....
T Consensus 125 leGP~~~~~~~g~h~~~~~~~~~~~~~~~~~~~~~~~ik~~t-------laPE~~~~~~~i~~~~~~gi~v~~GH~~a~~ 197 (374)
T cd00854 125 LEGPFISPEKKGAHPPEYLRAPDPEELKKWLEAAGGLIKLVT-------LAPELDGALELIRYLVERGIIVSIGHSDATY 197 (374)
T ss_pred eecCccCcccCCCCCHHHcCCcCHHHHHHHHHhcCCCEEEEE-------ECCCCCChHHHHHHHHHCCeEEEeeCCcCCH
Confidence 2343333322111111111 1112233344444446677652 233333 677888999999996 6765331
Q ss_pred chh--HHHHhhcCCCCc-------------hHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcC--CeEEECccchhhc
Q 012333 248 YEN--QVVMDTRKVDHG-------------TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG--VKVSHCPASAMRM 310 (466)
Q Consensus 248 ~~~--~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g--~~~~~~p~~~~~~ 310 (466)
... ..........|. .....-....+ .-.++.|+.|++++.++.+.+.. -.+.+++-+....
T Consensus 198 ~~~~~a~~~G~~~~tH~~n~m~~~~~r~~~~~~a~l~~~~~-~~~li~dg~Hv~~~~~~~~~r~~g~~~~~lvtD~~~~~ 276 (374)
T cd00854 198 EQAVAAFEAGATHVTHLFNAMSPLHHREPGVVGAALSDDDV-YAELIADGIHVHPAAVRLAYRAKGADKIVLVTDAMAAA 276 (374)
T ss_pred HHHHHHHHcCCCeeeECCCCCCCcCCCCCcHHHHhhcCCCC-eEEEEcCCCcCCHHHHHHHHHhcCCCcEEEEecccccc
Confidence 111 111111111110 01100000000 01278899999999999998884 3455554433211
Q ss_pred ---cCCccHHHH--HHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 012333 311 ---LGFAPIKEM--LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (466)
Q Consensus 311 ---~~~~~~~~~--~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 385 (466)
.+.+++... ...+-.+.+.+|... +...++.+.++..... .+++++++++++|.|||+++
T Consensus 277 G~~~g~y~~~~~~~~~~~~~~~~~~g~la-G~~~~l~~~~~~l~~~--------------~~l~~~~al~~aT~npA~~l 341 (374)
T cd00854 277 GLPDGEYELGGQTVTVKDGVARLADGTLA-GSTLTMDQAVRNMVKW--------------GGCPLEEAVRMASLNPAKLL 341 (374)
T ss_pred CCCCCeEEECCEEEEEECCEEEcCCCCee-ehHhhHHHHHHHHHHh--------------hCCCHHHHHHHHhHHHHHHc
Confidence 122222211 011122233344322 2335667776654322 13899999999999999999
Q ss_pred CCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEcc
Q 012333 386 LWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNG 438 (466)
Q Consensus 386 gl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G 438 (466)
|++++.|+|++|+.|||+++|.+ .++..||++|
T Consensus 342 g~~~~~G~i~~G~~ADlvv~d~~--------------------~~v~~~~~~G 374 (374)
T cd00854 342 GLDDRKGSLKPGKDADLVVLDDD--------------------LNVKATWING 374 (374)
T ss_pred CCCCCcCCcCCCCcCCEEEECCC--------------------CcEEEEEeCc
Confidence 99877899999999999999998 5899999887
No 93
>PRK00369 pyrC dihydroorotase; Provisional
Probab=99.94 E-value=2.4e-25 Score=211.25 Aligned_cols=326 Identities=14% Similarity=0.140 Sum_probs=182.6
Q ss_pred eceEEEEECCEEEEEcCCchhhhhhccCCCeEEeC-CCcEEeecccccccCCcccccccccCCCCchHhhhhccccccCC
Q 012333 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDL-QSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESN 117 (466)
Q Consensus 39 ~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~-~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (466)
.+..|.+++|+|..|++.. + .++++||+ +|++|+|||||+|+|+... .
T Consensus 12 ~~~~~~~~~~~~~~i~~~~------~-~~~~~id~~~G~~vlPG~ID~HvH~r~p------------------------g 60 (392)
T PRK00369 12 GKEIKEICINFDRRIKEIK------S-RCKPDLDLPQGTLILPGAIDLHVHLRGL------------------------K 60 (392)
T ss_pred CCceEEEeeeeeeeEeecc------C-CCCceeecCCCCEEeCCEEEcccccCCC------------------------C
Confidence 3447788899998888752 1 36789999 6999999999999998320 1
Q ss_pred CChhHHHHHHHHHHHHHHhcCceeeeecCccC-----HHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHH
Q 012333 118 MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 192 (466)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (466)
....+ ......++++.+||||+++|+... ...+........-.......... +... .. .
T Consensus 61 ~~~~e---d~~sgs~AAa~GGvTtv~~mPnt~P~~~~~~~l~~~~~~a~~~~~vd~~~~~---~~~~-----~~----~- 124 (392)
T PRK00369 61 LSYKE---DVASGTSEAAYGGVTLVADMPNTIPPLNTPEAITEKLAELEYYSRVDYFVYS---GVTK-----DP----E- 124 (392)
T ss_pred Ccccc---cHHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCCeEEEEEEe---eccC-----CH----H-
Confidence 11111 122345678999999999987431 22222222222222111111111 1110 11 1
Q ss_pred HHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCch---HHHHhh
Q 012333 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT---VTFLDK 269 (466)
Q Consensus 193 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 269 (466)
+ +..+ +...++.+. . .. ...++++.+.+++..+.+|+.+....... .+..... ...+..
T Consensus 125 --e-l~~~---~~~g~k~f~---~--~~---~~~~~~~~~~~~~~~v~~HaE~~~l~~~~----~~~~rp~~aE~~ai~~ 186 (392)
T PRK00369 125 --K-VDKL---PIAGYKIFP---E--DL---EREETFRVLLKSRKLKILHPEVPLALKSN----RKLRRNCWYEIAALYY 186 (392)
T ss_pred --H-HHHh---hCceEEEEC---C--CC---chHHHHHHHHHhCCEEEEeCCCHHHhhcc----hhcccCHHHHHHHHHH
Confidence 1 1111 223344431 1 11 12233444555668899999764321110 1111111 111122
Q ss_pred hccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-------cCCc---------cHHHHHHcCCcEEEccCCC
Q 012333 270 IEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-------LGFA---------PIKEMLHADICVSLGTDGA 333 (466)
Q Consensus 270 ~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-------~~~~---------~~~~~~~~gi~~~~gsD~~ 333 (466)
...+ .+..+.|.. +.+.++.+++.|+.+.+||++-+.- .-.+ .+++.+.. ..+++|||.
T Consensus 187 ~~~~-~~lhi~HvS--t~~~v~~ak~~gvt~Ev~pHhL~l~~~~~~~~k~~PPLR~~~dr~aL~~~l~~--id~i~SDHa 261 (392)
T PRK00369 187 VKDY-QNVHITHAS--NPRTVRLAKELGFTVDITPHHLLVNGEKDCLTKVNPPIRDINERLWLLQALSE--VDAIASDHA 261 (392)
T ss_pred HHHh-CCEEEEECC--CHHHHHHHHHCCCeEEechhHheeccCCCCceEEeCCCCCHHHHHHHHHHHHh--CCEEEeCCC
Confidence 2222 344455544 2466788888898999999865321 0112 33344555 678999999
Q ss_pred CCCCCCC---HH---------HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccC
Q 012333 334 PSNNRMS---IV---------DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKAD 401 (466)
Q Consensus 334 ~~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~AD 401 (466)
|+..... ++ +.. ...+... ....+++++++++++|.|||+++|+. .|.|++|++||
T Consensus 262 P~~~~~K~~~f~~~~~Gi~GlE~~-lpll~~~---------v~~~~lsl~~~v~~~s~nPA~ilgl~--~g~i~~G~~AD 329 (392)
T PRK00369 262 PHSSFEKLQPYEVCPPGIAALSFT-PPFIYTL---------VSKGILSIDRAVELISTNPARILGIP--YGEIKEGYRAN 329 (392)
T ss_pred CCCHHHccCCHhhCCCCCeeHHHH-HHHHHHH---------HHcCCCCHHHHHHHHHHHHHHHhCCC--CCccCCCCccC
Confidence 8742111 11 111 1111110 11235999999999999999999994 38899999999
Q ss_pred EEEEcCCCCCCCCc-----CCcccceecccCCCCeeEEEEccEEEEECCeeee
Q 012333 402 MVVVDPFSWPMVPV-----HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 449 (466)
Q Consensus 402 lvv~d~~~~~~~~~-----~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 449 (466)
|++||++.|..... .+|+.... -.++|..||++|++||+++++++
T Consensus 330 lvi~d~~~~~~~~~~sk~~~sp~~G~~---l~G~v~~ti~~G~~v~~~~~~~~ 379 (392)
T PRK00369 330 FTVIQFEDWRYSTKYSKVIETPLDGFE---LKASVYATIVQGKLAYLEGEVFP 379 (392)
T ss_pred EEEEeCCceeEccccccCCCCCCCCCE---eeeEEEEEEECCEEEEECCeEec
Confidence 99999986542211 12222211 13589999999999999998763
No 94
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.94 E-value=3.4e-24 Score=204.84 Aligned_cols=337 Identities=15% Similarity=0.156 Sum_probs=184.1
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCC-cEEeecccccccCCcccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS-QILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G-~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
+|++|+|++|++ +. ..+|+|+||||++|++.... ++.++||++| ++|+|||||+|+|+....
T Consensus 1 ~~~~i~n~~i~~--~~-----~~~v~i~~g~I~~v~~~~~~------~~~~~iD~~g~~~l~PG~ID~H~H~~~~~---- 63 (365)
T TIGR03583 1 YDLLIKNGRTVN--GT-----PVDIAIEDGKIAAVGTTITG------SAKQTIDLEGETYVSAGWIDDHTHCFPKS---- 63 (365)
T ss_pred CcEEEECcEEec--CC-----eeEEEEECCEEEEecCCCCC------CCCeEEECCCCeEEecCEEEeeeccCCCc----
Confidence 478999999995 21 23999999999999863221 2458999999 999999999999984210
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc---cCHHHHHHHHHHhCCeEEeecccccCC
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCG 174 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (466)
.....+ .. ..++.+|||++.+++. .....+.+.......+.+.......
T Consensus 64 -------------------~~~~~~-~~------~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-- 115 (365)
T TIGR03583 64 -------------------ALYYDE-PD------EIGVKTGVTTVVDAGSTGADDIDDFYRLAQQAKTNVFALLNISR-- 115 (365)
T ss_pred -------------------ccccCC-Hh------HhhhcCceeEEEeCCCCCCCCHHHHHHHHHhhCCcEEEEeeehh--
Confidence 000001 00 1147889999998652 3344455544444433322211111
Q ss_pred CCC-CcccccCChHHHHHHHHHHHHHhccCCCCCe---EEEEeeccc--ccCCHHHHHHHHHHHHHcCCccceeccCCcc
Q 012333 175 EGL-PASWAVRTTDDCIQSQKELYAKHHHAADGRI---RIWFGIRQI--MNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (466)
Q Consensus 175 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~--~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~ 248 (466)
.|. ++...........++..+.+... ...+ +..+.+... ...++..+.+.+..+ ..+.++.+|+.+...
T Consensus 116 ~G~~~~~~~~~~~~~~~~~l~~~~~~~----~~~vv~~~~~~t~~~i~E~gl~~~~~~~~l~~~-~~~~pv~vH~~~a~~ 190 (365)
T TIGR03583 116 IGLVAQDELADLSNLDASAVKQAVERY----PDFIVGLKARMSKSVVGDNGIEPLEIAKQIQQE-NLELPLMVHIGSAPP 190 (365)
T ss_pred ccccChhhhhChHHhHHHHHHHHHHhC----cCcEEEEEEeecccccccCCcCHHHHHHHHHHh-cCCCcEEEEeCCCcc
Confidence 122 11110011111222222233221 1112 222222111 122344454444433 578999999987654
Q ss_pred hhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh-----------hhHHHHHhcCCeEEECc-cchhhccCCccH
Q 012333 249 ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCP-ASAMRMLGFAPI 316 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-----------~~~~~~~~~g~~~~~~p-~~~~~~~~~~~~ 316 (466)
...... ..+ .....+.|+..-++ +.+....+.|+.+.+.- ..... ....
T Consensus 191 ~~~~i~-------------~~~---~~g~~~~H~fng~~~~~~r~~g~~~~~~~~~l~~G~i~d~~hg~~~~~---~~~~ 251 (365)
T TIGR03583 191 ELDEIL-------------ALM---EKGDVLTHCFNGKPNGILRETGEVKPSVLEAYNRGVILDVGHGTASFS---FHVA 251 (365)
T ss_pred CHHHHH-------------HHh---cCCCeeeeeecCCCCCCCCCcchHHHHHHHHHhCeEEEEeCCCCCCch---HHHH
Confidence 332222 211 11124678766554 66777777888776541 11110 0112
Q ss_pred HHHHHcC-CcEEEccCCCCCC----CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcc
Q 012333 317 KEMLHAD-ICVSLGTDGAPSN----NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (466)
Q Consensus 317 ~~~~~~g-i~~~~gsD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~ 391 (466)
..+...+ +.++.++|.+..+ +...+...++... . .+++++++++++|.|||+++|+++ .
T Consensus 252 ~~~~~~~~~~~td~~d~~~~~~~~gp~~~l~~~~~~~~--~-------------~g~~~~ea~~~~t~npa~~~gl~~-~ 315 (365)
T TIGR03583 252 EKAKRAGIFPDTISTDIYIRNRINGPVYSLATVMSKFL--A-------------LGYSLEEVIEKVTKNAAEILKLTQ-K 315 (365)
T ss_pred HHHHhCCCCCcccccccccCCCccCccccHHHHHHHHH--H-------------cCCCHHHHHHHHHHHHHHHhCCCC-C
Confidence 2333445 3356666763221 1222344444322 1 149999999999999999999964 7
Q ss_pred cccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEE
Q 012333 392 GSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWV 441 (466)
Q Consensus 392 G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v 441 (466)
|+|++|++|||+|||.+.-. .++.|...+.+..-....+..|+++|++.
T Consensus 316 g~i~~g~~ad~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 364 (365)
T TIGR03583 316 GRLQEGYDADLTIFTVKAEP-KKLTDSEGDSRIAEEQIKPLAVIIGGEYY 364 (365)
T ss_pred CCcCCCCcccEEEEecCCCC-ceeecCCCCEEEeccccceEEEEECCEEe
Confidence 99999999999999985211 12222222221112234678899999853
No 95
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.94 E-value=7.8e-25 Score=206.81 Aligned_cols=296 Identities=18% Similarity=0.172 Sum_probs=175.3
Q ss_pred EEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCCCCchHhhhhccccccCCCChh
Q 012333 42 GVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEE 121 (466)
Q Consensus 42 ~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (466)
+|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+...... ...+
T Consensus 1 ~i~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~g~~--------------------~~~~-- 53 (338)
T cd01307 1 DVAIENGKIAAVGAALAA-----PAATQIVDAGGCYVSPGWIDLHVHVYQGGTR--------------------YGDR-- 53 (338)
T ss_pred CEEEECCEEEEccCCCCC-----CCCCeEEECCCCEEecCeEEeeecCCCCCcc--------------------cCCC--
Confidence 589999999999985321 1246899999999999999999999532110 0000
Q ss_pred HHHHHHHHHHHHHHhcCceeeeecCccC---HHHHHHHH-HHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHH
Q 012333 122 DSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAV-ELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197 (466)
Q Consensus 122 ~~~~~~~~~~~~~~~~GvTtv~~~~~~~---~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (466)
..+.++..||||+++++... .....+.. ...+.+......+...+...+..+. .......+...+.+
T Consensus 54 --------~~~~a~~~GvTtvvd~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~ 124 (338)
T cd01307 54 --------PDMIGVKSGVTTVVDAGSAGADNIDGFRYTVIERSATRVYAFLNISRVGLVAQDELP-DPDNIDEDAVVAAA 124 (338)
T ss_pred --------HhHHHHcCceeEEEeCCCCCCCCHHHHHHHHHHhhhceEEEEEeeeccccccccccC-ChhHCCHHHHHHHH
Confidence 22447899999999986432 23323333 3444433221111111111111111 11111122233333
Q ss_pred HHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCe
Q 012333 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL 277 (466)
Q Consensus 198 ~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (466)
++..+ +-..++..+............+++.++++++.++++.+|+.+...... +.+.. +....
T Consensus 125 ~e~~~-gi~gik~~~~~~~~~~~~~~~l~~~~~~a~~~~~pi~vH~~~~~~~~~-------------~~~~~---l~~g~ 187 (338)
T cd01307 125 REYPD-VIVGLKARASKSVVGEWGIKPLELAKKIAKEADLPLMVHIGSPPPILD-------------EVVPL---LRRGD 187 (338)
T ss_pred HHCcC-cEEEEEEEeecccccccCCcHHHHHHHHHHHcCCCEEEEeCCCCCCHH-------------HHHHH---hcCCC
Confidence 22221 222344444333322223334788899999999999999977543222 22221 22334
Q ss_pred eEEEeecCCh-----------hhHHHHHhcCCeEEECccchhhccCCccHHHHHHcCC-cEEEccCCCCCC----CCCCH
Q 012333 278 LSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI-CVSLGTDGAPSN----NRMSI 341 (466)
Q Consensus 278 ~~~H~~~~~~-----------~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~gi-~~~~gsD~~~~~----~~~~~ 341 (466)
.+.|+..-+. +.+..+.++|+.+.+..... .........++++|+ +.++++|.+..+ +.+.+
T Consensus 188 ~~~H~~~g~~~~~~~~~~~~~~~~~~~~~~G~~~d~~~G~~--~~~~~~~~~l~~~G~~~~~lstD~~~~~~~~~p~~~l 265 (338)
T cd01307 188 VLTHCFNGKPNGIVDEEGEVLPLVRRARERGVIFDVGHGTA--SFSFRVARAAIAAGLLPDTISSDIHGRNRTNGPVYAL 265 (338)
T ss_pred EEEeccCCCCCCCCCCCCcHHHHHHHHHhCCEEEEeCCCCC--chhHHHHHHHHHCCCCCeeecCCccccCCCCCccccH
Confidence 6788877543 56788888998877552110 011134567888997 568999985422 11222
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC
Q 012333 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (466)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~ 408 (466)
...++.. . ..+++++++++++|.|||+++++ +++|+|++|+.|||+|++.+
T Consensus 266 ~~~l~~l--~-------------~~gi~~ee~~~~~T~NpA~~lgl-~~~G~l~~G~~ad~~v~~~~ 316 (338)
T cd01307 266 ATTLSKL--L-------------ALGMPLEEVIEAVTANPARMLGL-AEIGTLAVGYDADLTVFDLK 316 (338)
T ss_pred HHHHHHH--H-------------HcCCCHHHHHHHHHHHHHHHcCC-CCCCccCCCCcCCEEEEeCC
Confidence 2222222 1 12599999999999999999999 56899999999999999987
No 96
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.94 E-value=6e-25 Score=196.93 Aligned_cols=93 Identities=24% Similarity=0.267 Sum_probs=69.5
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCC-CcCC---cccceecccCCCCeeEEEEccEEE
Q 012333 366 AALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV-PVHD---RITSLVYCMRTENVVSVMCNGQWV 441 (466)
Q Consensus 366 ~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~-~~~~---~~~~~~~~~~~~~v~~v~v~G~~v 441 (466)
.-||++.+++.+|..+|+.+||. ++|-|++|+.|||+|+|+...... +..+ |..-..+.....++..|.|+|.+.
T Consensus 472 p~l~Le~av~rmT~~~Ae~~GL~-drGlvreG~rADl~viDp~~vr~~a~y~~~~lPa~G~~~~~vn~~~vat~v~Gvvs 550 (579)
T COG3653 472 PLLSLERAVRRMTGELAEWFGLG-DRGLVREGDRADLVVIDPHLVRDVATYTEPALPAYGILRVMVNRNVVATGVGGVVS 550 (579)
T ss_pred CcccHHHHHHHHhccHHHHhCcc-cccccccccccceEEEccccccccccccCccCCCCcceEEEEeccceeeecceeEE
Confidence 34999999999999999999995 479999999999999999844332 2222 222222222334455555569999
Q ss_pred EECCeeee-ccHHHHHHHH
Q 012333 442 MKNKKILL-LMRGRLFQLQ 459 (466)
Q Consensus 442 ~~~g~~~~-~~~~~~~~~~ 459 (466)
+++|++.+ ++.|++++.-
T Consensus 551 ~rdGe~tg~~~aGR~lR~g 569 (579)
T COG3653 551 FRDGEFTGQVKAGRYLRAG 569 (579)
T ss_pred EecCcccCcccccchhccc
Confidence 99999999 6899888754
No 97
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=99.94 E-value=2e-25 Score=193.46 Aligned_cols=329 Identities=23% Similarity=0.254 Sum_probs=189.7
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|.|++|+..|. + .++.|.|+||+|..|.+... ....-+|++|.+++|||||+|+--......
T Consensus 1 ~~lsnarivl~D~---v-~~gsv~i~DG~Ia~i~~g~s-------~~~~~~d~eGd~LLPGlIeLHtD~lE~~~~----- 64 (377)
T COG3454 1 MILSNARIVLEDR---V-VNGSVLIRDGLIADIDEGIS-------PLAAGIDGEGDYLLPGLIELHTDNLERFMT----- 64 (377)
T ss_pred CccccceEEeecc---e-eeeeEEEecceEeeeccccC-------cccccccCCCCeecccchhhcchhhhcccC-----
Confidence 4689999998653 3 34899999999999998643 235689999999999999999865321111
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecC--------c---cCHHHHHHHHHHh---C-----
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--------G---QHVSEMAKAVELL---G----- 161 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~--------~---~~~~~~~~~~~~~---g----- 161 (466)
.-.++.|+... .....-.+++.+|+||+.|.- + .++..++.+.... |
T Consensus 65 -----PRPgV~wp~~a---------Ai~ahD~~l~~sGITTv~dal~iGd~~~gg~r~~~~~~midaI~~~~~~g~lrad 130 (377)
T COG3454 65 -----PRPGVRWPPIA---------AILAHDAQLAASGITTVLDALAIGDVRDGGLRLENLRKMIDAIEEAQAAGRLRAD 130 (377)
T ss_pred -----CCCCCCCCchH---------HHHHhhHHHHhcChhhHHhhhhcCcccCCccchHHHHHHHHHHHHHHhccchhhc
Confidence 11223333211 122233568899999997731 1 1222333332221 1
Q ss_pred ----CeEEe-------------------ecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecc--
Q 012333 162 ----LRACL-------------------VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-- 216 (466)
Q Consensus 162 ----~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-- 216 (466)
+|.-. -.+.++..+|- ..-..++.+++.++.-....+..+..+..-+.
T Consensus 131 Hr~HlRcEvs~~~~l~~~e~~~~~p~v~LiSlMDH~PGQ-------rQf~~le~Y~~yy~~k~~~s~~e~~~~i~~r~a~ 203 (377)
T COG3454 131 HRLHLRCEVSHPATLPLFEDLMDHPRVKLISLMDHTPGQ-------RQFANLEKYREYYQGKRGLSDEEFAEFIEERQAL 203 (377)
T ss_pred cceeeeeecCChhHHHHHHHHhcCCCeeEEEecCCCCCc-------chhhhHHHHHHHHHhhcCCCHHHHHHHHHHHHHH
Confidence 11111 01122222211 11111222222221110000000000000000
Q ss_pred cccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhc
Q 012333 217 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA 296 (466)
Q Consensus 217 ~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 296 (466)
-...+......+..+|++.|+.+..|-+.+..-.. +....+ ..+ --+..+-+..+...+.
T Consensus 204 ~~~y~~~~r~~i~~~c~~rgI~lASHDDaT~~hV~-----------------es~~~G--v~i-AEFPtT~eAA~asr~~ 263 (377)
T COG3454 204 SARYSDPNRQAIAALCRERGIALASHDDATVEHVA-----------------ESHGLG--VAI-AEFPTTVEAAKASREL 263 (377)
T ss_pred HhhcccchHHHHHHHHHHcCCceecCCcCcHHHHH-----------------HHHhcC--eeE-EeCccHHHHHHHHHHh
Confidence 00012224566778899999999999755332211 111000 111 1122345666677778
Q ss_pred CCeEEECccchhhc---cCCccHHHHHHcCCcEEEccCCCCCCCCCCHH-HHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 012333 297 GVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIV-DEMYLASLINKGREVFANGTTDPAALPAET 372 (466)
Q Consensus 297 g~~~~~~p~~~~~~---~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~ 372 (466)
|..+.+-.+.-.+. .+.-..+++.+.|+..+++||+.|. +++ ..+..+... ..+++.+
T Consensus 264 Gm~VlMGAPNivrGgSHsGNvsA~ela~~glLDiLsSDY~P~----SLl~A~F~La~~~--------------~~~~lpq 325 (377)
T COG3454 264 GMQVLMGAPNIVRGGSHSGNVSARELAQHGLLDILSSDYVPA----SLLHAAFRLADLG--------------SNISLPQ 325 (377)
T ss_pred CchhhcCCCceeccCCcccchhHHHHHhCCceeeecccCCcH----HHHHHHHHHhhhh--------------cccCHHH
Confidence 98888877766655 3445678899999999999999875 333 333333221 1368999
Q ss_pred HHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEE
Q 012333 373 VLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 442 (466)
Q Consensus 373 al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 442 (466)
|+++.|.|||+.+||. ++|+|++|++||||.+..+.- -..|+.||+.||-|+
T Consensus 326 Avalvt~nPA~algl~-DRG~Ia~GlrADlv~v~~~~~-----------------vp~ir~vwr~G~rv~ 377 (377)
T COG3454 326 AVALVTKNPARALGLT-DRGRIAPGLRADLVRVRRDGG-----------------VPVIRTVWRAGKRVA 377 (377)
T ss_pred HHHHhccCHHHhcCCC-cccccccccccceEEEecCCC-----------------CceeeeeeecceecC
Confidence 9999999999999997 579999999999998877611 137999999999764
No 98
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=99.93 E-value=8e-25 Score=194.49 Aligned_cols=332 Identities=19% Similarity=0.240 Sum_probs=205.1
Q ss_pred cccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhh-----hhccCCCeEEeCCCcEEeecccccccCCc
Q 012333 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-----QFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~-----~~~~~~~~~iD~~G~~v~PG~ID~H~H~~ 90 (466)
....|++|.|+.|++..+ +.++||.|+||||.+||+.+.+.. ..-++.+++|-++|++|.-|-||+|+|+
T Consensus 64 ~~~~D~VITNa~IiD~~G----i~KADiGikdGrI~~IGKaGNPd~~dgV~iiiG~sTe~iagEg~I~TAGGiDtHiHf- 138 (568)
T COG0804 64 AGALDLVITNALIIDYWG----IVKADIGIKDGRIAGIGKAGNPDIMDGVTIIIGPSTEIIAGEGKIVTAGGIDTHIHF- 138 (568)
T ss_pred cCcccEEEeeeEEEeccc----eEEeecccccceEEEeecCCCCCccCCceEEeccccceecCCceEEeeccccceeEE-
Confidence 556899999999996532 467899999999999998765321 1122467899999999999999999998
Q ss_pred ccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeec---------------CccCHHHHHH
Q 012333 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA---------------GGQHVSEMAK 155 (466)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~---------------~~~~~~~~~~ 155 (466)
+.++ ....++.+|+||+.-- |..+...+.+
T Consensus 139 ---------------------------I~Pq--------qi~~Al~sGiTtmiGGGtGpa~Gt~aTT~TpG~w~i~rMl~ 183 (568)
T COG0804 139 ---------------------------ICPQ--------QIEEALASGITTMIGGGTGPADGTNATTCTPGPWHIARMLQ 183 (568)
T ss_pred ---------------------------ecHH--------HHHHHHhcCcEEEecCccCCCCCcccccccCCHHHHHHHHH
Confidence 3332 2355789999998542 2233455666
Q ss_pred HHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHc
Q 012333 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (466)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~ 235 (466)
+.....++.-+. +.|.. +... .+.++. .. +.+. +..|..+..++..+..++..|.++
T Consensus 184 a~d~~p~N~g~l------gKGn~------s~~~------~L~Eqi-~a--Ga~G--lKlHEDWG~TpaaI~~~L~VAD~~ 240 (568)
T COG0804 184 AADGLPMNIGFL------GKGNA------SNPA------PLAEQI-EA--GAIG--LKLHEDWGATPAAIDTCLSVADEY 240 (568)
T ss_pred hhhcCceeeEEe------ecCCC------CCch------hHHHHH-hh--ccce--eEeecccCCCHHHHHHHHhhhhhh
Confidence 665555544221 11111 1111 111111 11 2222 677888899999999999999999
Q ss_pred CCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecC-------ChhhHHHHHhcCCeE-EECccc-
Q 012333 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-------NHTEIGLLSRAGVKV-SHCPAS- 306 (466)
Q Consensus 236 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-------~~~~~~~~~~~g~~~-~~~p~~- 306 (466)
++.+.+|.+........ .+.+..++ .| ..|..|. .++.++.....++.. +..|+-
T Consensus 241 DvqVaiHtDTLNEsGfv-----------EdTi~A~~---gR--tIHtyHtEGAGGGHAPDiikv~~~~NvLPsSTNPT~P 304 (568)
T COG0804 241 DVQVAIHTDTLNESGFV-----------EDTIAAIK---GR--TIHTYHTEGAGGGHAPDIIKVAGQPNVLPSSTNPTRP 304 (568)
T ss_pred ceEEEEeecccccccch-----------HhHHHHhc---Cc--eeEEeeccCCCCCCccHHHHHccCCCcCcCCCCCCCC
Confidence 99999998653221111 11111111 11 1222221 123333332222221 111110
Q ss_pred --------------------------------hhhccCCccHHHHHHcCCcEEEccCCCCCCCCCCHH-HHHHHHHHHhc
Q 012333 307 --------------------------------AMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIV-DEMYLASLINK 353 (466)
Q Consensus 307 --------------------------------~~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~-~~~~~~~~~~~ 353 (466)
..|......-.-+.|.|+.-.++||+...+.....+ ...+.+..+.+
T Consensus 305 ytvNT~~EhlDMlMVcHhL~p~ipeDvaFAeSRIR~eTIAAEdiLhDmGafSmisSDSQAMGRvGEvi~RtwQtA~kmK~ 384 (568)
T COG0804 305 YTVNTIDEHLDMLMVCHHLDPRIPEDVAFAESRIRPETIAAEDILHDMGAFSMISSDSQAMGRVGEVITRTWQTADKMKK 384 (568)
T ss_pred cccccHHHhhhhhhhhccCCCCCcchhhhhhhccchhhhhHHHHHhhccceEEeccchHhhhccchhhhhHHHHHHHHHH
Confidence 011122233345778899999999998765432222 33333333333
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeE
Q 012333 354 GREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVS 433 (466)
Q Consensus 354 ~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~ 433 (466)
.+............+-....+...|.|||-..|+++..||+++||.||||+|++--| ..++..
T Consensus 385 qrG~L~~d~~~nDN~RvkRYiaKyTINPAIthGis~~vGSvEvGK~ADlVLW~PaFF-----------------GvKP~~ 447 (568)
T COG0804 385 QRGALPEDAGGNDNFRVKRYIAKYTINPAITHGISHEVGSVEVGKLADLVLWDPAFF-----------------GVKPEL 447 (568)
T ss_pred hcCCCCCCCCCCccHHHhhhhhheecCHHHhcccchhccceeccceeeeeeechhhc-----------------CCCcce
Confidence 333332222223457788999999999999999999999999999999999999733 368999
Q ss_pred EEEccEEEEE
Q 012333 434 VMCNGQWVMK 443 (466)
Q Consensus 434 v~v~G~~v~~ 443 (466)
|+++|-+.+.
T Consensus 448 vlkgG~ia~a 457 (568)
T COG0804 448 VLKGGMIAWA 457 (568)
T ss_pred EEecceeeee
Confidence 9999988865
No 99
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.92 E-value=1.4e-24 Score=206.26 Aligned_cols=282 Identities=27% Similarity=0.350 Sum_probs=176.0
Q ss_pred EEeecccccccCCcccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHH---
Q 012333 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEM--- 153 (466)
Q Consensus 77 ~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~--- 153 (466)
+|+|||||+|+|+.+....+. ...++.+.........++++||||+++++.......
T Consensus 1 ~v~PGlID~H~H~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~ 60 (333)
T PF01979_consen 1 YVMPGLIDAHVHGGQGGLRGL--------------------LDPEDHYESIRTGAKAALKGGVTTVLDTPHTSPNPDIEL 60 (333)
T ss_dssp EEEE-EEEEEEEGGGTTHTTS--------------------SSHHHHHHHHHHHHHHHHHTTEEEEEEEEESSHCHHHHH
T ss_pred CEEcChhHHhhCcCCcCcccc--------------------CCHHHHHHHHHHHHHHHHhcCeEEEEcCcccCCcccccc
Confidence 699999999999976544331 445666777777889999999999999842221111
Q ss_pred ----HHHHHH-hCCeEEeecccccCCCCCCcccccCChHH--------HHHHHHHHHHHhccCC--CCCeEEEEeecccc
Q 012333 154 ----AKAVEL-LGLRACLVQSTMDCGEGLPASWAVRTTDD--------CIQSQKELYAKHHHAA--DGRIRIWFGIRQIM 218 (466)
Q Consensus 154 ----~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~ 218 (466)
.+.... ..+..... .+.....+....+....... ...+..+.+..+.... ...+...+..+...
T Consensus 61 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (333)
T PF01979_consen 61 RNEIMEGLAAAPKIEPAMT-LLGTGSVGGHGEGPNEPPDKNGPHDEAFEGEDFIKFIEEAGSEIKRIDGVIPAISPHNPY 139 (333)
T ss_dssp HHHHHHHHHHHHHHEEEEE-EEEECECSEEEECHHHHHHHHSEHHHHHHHHHHHHHHHHHTTTCEEEECEEEEEEHHTTT
T ss_pred ccccccccccchhhhcccc-ccccccccccccccccccccccCCchhhhHHHHHHHhhhhhhhhcccccccccccccccc
Confidence 111111 11111000 00000001100000000000 0112233333332221 11445556667778
Q ss_pred cCCHHHHHHHHHHHHH-----c-CCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccC-----CCCeeEEEeecCCh
Q 012333 219 NATDRLLLETRDMARE-----F-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFL-----QNNLLSAHTVWVNH 287 (466)
Q Consensus 219 ~~~~~~l~~~~~~a~~-----~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~H~~~~~~ 287 (466)
..+.+.+.+.++.++. . +.++.+|+.+............ +....+.+.....+ ....++.|+.++++
T Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 217 (333)
T PF01979_consen 140 TVSDEELREAVELAKEFLAAEKLGIPVHIHVAEGTGEVEAMTHLY--GMSPIEALDHLGLLEEAIDDGVDLIAHGTHLSD 217 (333)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHTHEEEEEESSSHHHHCCCHHHH--SHHHHHHHHHHHSCHHHHHHHCEEEEEHTTSEH
T ss_pred cchhhhhhhHHhhhhhHHHHHhhcccceeeeccCcccceeEeeee--eccchhhhccchhhhhhcccccceeeccccCCH
Confidence 8899989999999988 3 9999999988765522222222 22344444444555 55678999999999
Q ss_pred hhHHHHHhcCCeEEECccchhh--------------------c-cCCccHHHHHHc-CCcEEEccCCCCCCCCCCHHHHH
Q 012333 288 TEIGLLSRAGVKVSHCPASAMR--------------------M-LGFAPIKEMLHA-DICVSLGTDGAPSNNRMSIVDEM 345 (466)
Q Consensus 288 ~~~~~~~~~g~~~~~~p~~~~~--------------------~-~~~~~~~~~~~~-gi~~~~gsD~~~~~~~~~~~~~~ 345 (466)
++++++++.+..+..||..+.. . ....++..+++. |+. +|||+. . +++
T Consensus 218 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~--lgtDg~------~--~~l 287 (333)
T PF01979_consen 218 EEIELLKETGIGIIHCPISNDSAPHKPGKAIMMDGTAEGIYGLGSGGAPLFRMLDKMGVN--LGTDGV------A--EEL 287 (333)
T ss_dssp HHHHHHHHHTHEEEEEHHHHHHHHHHTTHHSETTBSBTSBSCTTHHHHHHHHHHHCTTHE--ETTCTT------C--HHH
T ss_pred HHhhhhhccCCccccccchhhhhccccccccccchhccccccccccccchhhhhhhcccc--cccccc------c--ccc
Confidence 9999999999999999998865 1 112345566676 888 999931 1 555
Q ss_pred HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEc
Q 012333 346 YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVD 406 (466)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d 406 (466)
+..... +++++++++++|.|||+++|+++++|+|++||+|||||||
T Consensus 288 ~~~~~~---------------~~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~ADlvv~D 333 (333)
T PF01979_consen 288 KLFVRL---------------GISPEEALKMATINPAKILGLDDDKGSIEPGKDADLVVLD 333 (333)
T ss_dssp HHHHHH---------------HSHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB--EEEEE
T ss_pred cccccc---------------cccccccccccchhHHHHcCCCCCEEEeCcCCCcCEEEeC
Confidence 554332 2899999999999999999999899999999999999997
No 100
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=99.91 E-value=2.9e-23 Score=184.86 Aligned_cols=129 Identities=20% Similarity=0.179 Sum_probs=86.2
Q ss_pred HHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCC-----------CCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANG-----------TTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 320 ~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
.+...++++.||+|..++.......|.+. +..+.+.....+ ..-...+++.|...+.-.+|||.+||.
T Consensus 380 i~dp~kv~lTTD~PNgGpFt~YP~v~awl-MS~k~R~~~i~~~hkwa~~rs~l~~idrE~t~~eia~~TRa~~ak~lgl~ 458 (575)
T COG1229 380 INDPWKVVLTTDSPNGGPFTRYPEVMAWL-MSEKYREEWIEGVHKWAQDRSALAGIDRELTLYELAIMTRANPAKVLGLS 458 (575)
T ss_pred ecCCCeEEEeccCCCCCCccccHHHHHHH-HhHHHHHHHHhhhhHhhhhhcccccccccccHHHHHHHHhcChhhhcccc
Confidence 45567899999998665443332222211 111111110000 011234899999999999999999999
Q ss_pred CcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccH
Q 012333 389 NDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMR 452 (466)
Q Consensus 389 ~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~ 452 (466)
+++|+|.+|.+|||.|+|-++....|..| +.++.-. =++..+|+++|++|.++|+++....
T Consensus 459 e~kGhLg~GadadIaiYdlnP~~vDps~d-ye~v~ka--f~~A~ytlK~GeIvvkdGeiv~~p~ 519 (575)
T COG1229 459 ERKGHLGVGADADIAIYDLNPEQVDPSND-YEKVEKA--FRKAAYTLKGGEIVVKDGEIVAEPE 519 (575)
T ss_pred cccCccCcCccCceEEEecChhhcCCccc-HHHHHHH--HhheeEEecCceEEEecceEEeccc
Confidence 99999999999999999999666555544 2111100 1578999999999999999876543
No 101
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.90 E-value=1.8e-21 Score=188.91 Aligned_cols=282 Identities=18% Similarity=0.259 Sum_probs=158.2
Q ss_pred eCCCcEEeecccccccCCcccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc----
Q 012333 72 DLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---- 147 (466)
Q Consensus 72 D~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~---- 147 (466)
|++|++|+|||||+|+|+.. .+.....+ .+.++.+||||+++++.
T Consensus 1 Da~G~~v~PG~ID~H~Hi~~-------------------------~~~~~~~~------~~~a~~~GvTtvv~~p~~~~~ 49 (422)
T cd01295 1 DAEGKYIVPGFIDAHLHIES-------------------------SMLTPSEF------AKAVLPHGTTTVIADPHEIAN 49 (422)
T ss_pred CCCCCEEccCEEEccCCcCC-------------------------CCCChHHH------HHHHHCCCcEEEEeCCCCCCc
Confidence 78999999999999999932 22222222 34588999999998641
Q ss_pred ----cCHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHH
Q 012333 148 ----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (466)
Q Consensus 148 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 223 (466)
.....+.+..+...++.+...+.. .+..+.. .....-..++..+.++. .+--.++..+..+.. ...++
T Consensus 50 v~g~~~~~~~~~~a~~~p~~~~~~~p~~--vp~t~~e--~~g~~~~~~~i~~l~~~---~~vvglgE~md~~~v-~~~~~ 121 (422)
T cd01295 50 VAGVDGIEFMLEDAKKTPLDIFWMLPSC--VPATPFE--TSGAELTAEDIKELLEH---PEVVGLGEVMDFPGV-IEGDD 121 (422)
T ss_pred CCCHHHHHHHHHHHhCCCceEEEeCCCc--CCCCCCC--CCCCcCCHHHHHHHhcC---CCCcEEEEeccCccc-cCCcH
Confidence 222333333334444444332211 0000000 00000012222222221 111222222222211 23556
Q ss_pred HHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEEC
Q 012333 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~ 303 (466)
.+.+.++.+++.+.++.+|+...... .+..+...+ ....|.....++.++++ ++|+.+.++
T Consensus 122 ~l~~~i~~A~~~g~~v~~Ha~g~~~~-------------~L~a~l~aG-----i~~dH~~~~~eea~e~l-~~G~~i~i~ 182 (422)
T cd01295 122 EMLAKIQAAKKAGKPVDGHAPGLSGE-------------ELNAYMAAG-----ISTDHEAMTGEEALEKL-RLGMYVMLR 182 (422)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCHH-------------HHHHHHHcC-----CCCCcCCCcHHHHHHHH-HCCCEEEEE
Confidence 78888999999999999999653310 011111111 11237555444555554 799998887
Q ss_pred ccchhhccCCccHHHHHH--cCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 012333 304 PASAMRMLGFAPIKEMLH--ADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 381 (466)
Q Consensus 304 p~~~~~~~~~~~~~~~~~--~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~ 381 (466)
+.+.... ...+...+. .+.+++++||.+... ++...-......... ...+++++++++++|.||
T Consensus 183 ~g~~~~~--~~~~~~~l~~~~~~~i~l~TD~~~~~---~~~~~g~~~~v~r~a---------~~~g~s~~eal~~aT~n~ 248 (422)
T cd01295 183 EGSIAKN--LEALLPAITEKNFRRFMFCTDDVHPD---DLLSEGHLDYIVRRA---------IEAGIPPEDAIQMATINP 248 (422)
T ss_pred CcccHhh--HHHHHHhhhhccCCeEEEEcCCCCch---hhhhcchHHHHHHHH---------HHcCCCHHHHHHHHhHHH
Confidence 6543110 111122222 478999999986321 111000011111110 012599999999999999
Q ss_pred HHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEEC
Q 012333 382 AKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 444 (466)
Q Consensus 382 A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~ 444 (466)
|+++|+ +++|+|++|+.|||++++.. ...++..||++|++||+.
T Consensus 249 A~~~gl-~~~G~i~~G~~AD~vv~~~~------------------~~~~v~~v~~~G~~v~~r 292 (422)
T cd01295 249 AECYGL-HDLGAIAPGRIADIVILDDL------------------ENFNITTVLAKGIAVVER 292 (422)
T ss_pred HHHcCC-CCCcccCCCCcCCEEEECCC------------------CCCceEEEEECCeEEEEe
Confidence 999999 67899999999999999853 124899999999999874
No 102
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=99.87 E-value=3.3e-21 Score=184.51 Aligned_cols=161 Identities=16% Similarity=0.169 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEE
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~ 302 (466)
..+.++++++++++++++++..+.......... ....+......+..|...++.+++.. .+....+
T Consensus 172 ~~v~~~~~la~~~~~~i~i~h~ss~~~l~~i~~-----------~~~~G~~~~~e~~~h~L~ld~~~~~~---~~~~~k~ 237 (374)
T cd01317 172 IMVARDLELAEATGARVHFQHLSTARSLELIRK-----------AKAKGLPVTAEVTPHHLLLDDEALES---YDTNAKV 237 (374)
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHH-----------HHHCCCCEEEEecHHHHhcCHHHHhc---cCCceEE
Confidence 366788999999999998844443322211111 11112222234566888888877643 4667778
Q ss_pred CccchhhccCCccHHHHHHcCCcEEEccCCCCCCCCCCH--HH---------HHHHHHHHhcccccccCCCCCCCCCCHH
Q 012333 303 CPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSI--VD---------EMYLASLINKGREVFANGTTDPAALPAE 371 (466)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~~ls~~ 371 (466)
+|+.... ....++.+++++|+.+++|||+.+.+...+. +. ++.....++... ....++++
T Consensus 238 ~Pplr~~-~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~~~~~~~~Gi~g~e~~l~~~~~~~~--------~~~~~~~~ 308 (374)
T cd01317 238 NPPLRSE-EDREALIEALKDGTIDAIASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTLLV--------KGGLLTLP 308 (374)
T ss_pred cCCCCCH-HHHHHHHHHHhcCCceEEEcCCCCCCHHHccCCHhhCCCcHhHHHHHHHHHHHHHH--------HcCCCCHH
Confidence 8864321 3457889999999999999999987532221 11 233332222211 12248999
Q ss_pred HHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC
Q 012333 372 TVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (466)
Q Consensus 372 ~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~ 408 (466)
++++++|.|||+++|+. .|+|++|++|||+++|.+
T Consensus 309 ~~~~~~t~npA~~lgl~--~G~l~~G~~ADlvi~d~~ 343 (374)
T cd01317 309 DLIRALSTNPAKILGLP--PGRLEVGAPADLVLFDPD 343 (374)
T ss_pred HHHHHHHHHHHHHhCCC--CCcccCCCcCCEEEECCC
Confidence 99999999999999995 399999999999999988
No 103
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=99.87 E-value=1.4e-20 Score=178.16 Aligned_cols=301 Identities=17% Similarity=0.193 Sum_probs=160.5
Q ss_pred CcEEeecccccccCCcccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-----
Q 012333 75 SQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----- 149 (466)
Q Consensus 75 G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~----- 149 (466)
|++|+|||||+|+|+.. ......+ ......++++.+||||+++|+...
T Consensus 1 G~~vlPG~iD~HvH~r~------------------------pg~~~~e---d~~s~t~aA~~GGvTtv~~mPnt~P~~~~ 53 (361)
T cd01318 1 GLLILPGVIDIHVHFRE------------------------PGLTYKE---DFVSGSRAAAAGGVTTVMDMPNTKPPTTT 53 (361)
T ss_pred CCEEecCeeEeeecCCC------------------------CCCCccC---cHHHHHHHHHcCCCEEEEECCCCCCCCCc
Confidence 78999999999999832 0011111 122344668999999999987421
Q ss_pred HHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecc-cccCCHHHHHHH
Q 012333 150 VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-IMNATDRLLLET 228 (466)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~l~~~ 228 (466)
...+........-.......... +.. .. ++..+. .+.+...++.+..... ....+...+.++
T Consensus 54 ~~~~~~~~~~a~~~~~vd~~~~~---~~~--------~~--~~l~~~----~~~~~~g~k~f~~~~~~~~~~~~~~l~~~ 116 (361)
T cd01318 54 AEALYEKLRLAAAKSVVDYGLYF---GVT--------GS--EDLEEL----DKAPPAGYKIFMGDSTGDLLDDEETLERI 116 (361)
T ss_pred HHHHHHHHHHhccCceeEEEEEE---eec--------Ch--hhHHHH----HHhhCcEEEEEEecCCCCcCCCHHHHHHH
Confidence 22222222222111111111110 010 00 111121 1122234555443211 112466777777
Q ss_pred HHHHHHcCCccceeccCCcchhHHHHhh--c---CCCCc-------hHHHHhhhccCCCCeeEEEeecCChhhHHHHHhc
Q 012333 229 RDMAREFKTGIHMHVAEIPYENQVVMDT--R---KVDHG-------TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA 296 (466)
Q Consensus 229 ~~~a~~~~~~v~~H~~~~~~~~~~~~~~--~---~~~~~-------~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 296 (466)
++.+. .++.+|+.+........... . ..+.. ....+......+.+..+.|... .+.++.+++.
T Consensus 117 ~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~Hvs~--~~~~~~i~~~ 191 (361)
T cd01318 117 FAEGS---VLVTFHAEDEDRLRENRKELKGESAHPRIRDAEAAAVATARALKLARRHGARLHICHVST--PEELKLIKKA 191 (361)
T ss_pred HHhcC---CeEEEeCCChHHHHHHHhhhhhccCCCCcCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCC--HHHHHHHHHh
Confidence 77664 78999997643311111100 0 00000 1122333333455666666654 4566676665
Q ss_pred --CCeEEECccchhhc-----------cCCcc---------HHHHHHcCCcEEEccCCCCCCCC------------CCHH
Q 012333 297 --GVKVSHCPASAMRM-----------LGFAP---------IKEMLHADICVSLGTDGAPSNNR------------MSIV 342 (466)
Q Consensus 297 --g~~~~~~p~~~~~~-----------~~~~~---------~~~~~~~gi~~~~gsD~~~~~~~------------~~~~ 342 (466)
++...+||++.... .-.+| +++.++.|...+++|||.|.... +.-.
T Consensus 192 k~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~SDh~P~~~~~k~~~~~~a~~G~~g~ 271 (361)
T cd01318 192 KPGVTVEVTPHHLFLDVEDYDRLGTLGKVNPPLRSREDRKALLQALADGRIDVIASDHAPHTLEEKRKGYPAAPSGIPGV 271 (361)
T ss_pred CCCeEEEeCHHHhhcCHHHHhcCCCeEEEeCCCCCHHHHHHHHHHHhCCCCCEEeeCCCCCCHHHccCChhhCCCCCccH
Confidence 78888999853210 11133 34558999999999999876311 1111
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCC-------
Q 012333 343 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVP------- 414 (466)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~------- 414 (466)
+.+.. .+.. .....+++++++++++|.|||+++|+.+ +|+|++|++|||+|+|++ .|+..+
T Consensus 272 e~~l~-~~~~---------~v~~~~l~l~~a~~~~t~nPA~~lgl~~-~G~i~~G~~ADlvv~d~~~~~~v~~~~~~s~~ 340 (361)
T cd01318 272 ETALP-LMLT---------LVNKGILSLSRVVRLTSHNPARIFGIKN-KGRIAEGYDADLTVVDLKEERTIRAEEFHSKA 340 (361)
T ss_pred HHHHH-HHHH---------HHHcCCCCHHHHHHHHhHHHHHHhCCCC-CCccCCCCcCCEEEEeCCCCEEECHHHccccC
Confidence 11111 1000 0012359999999999999999999954 799999999999999988 333211
Q ss_pred cCCcccceecccCCCCeeEEEEcc
Q 012333 415 VHDRITSLVYCMRTENVVSVMCNG 438 (466)
Q Consensus 415 ~~~~~~~~~~~~~~~~v~~v~v~G 438 (466)
..+|+....+ .++|..||++|
T Consensus 341 ~~tp~~G~~l---~G~v~~t~~~G 361 (361)
T cd01318 341 GWTPFEGFEV---TGFPVMTIVRG 361 (361)
T ss_pred CCCCCCCCEE---eeEEEEEEeCc
Confidence 1122222211 25777888776
No 104
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=99.86 E-value=9.2e-21 Score=184.72 Aligned_cols=177 Identities=26% Similarity=0.228 Sum_probs=125.3
Q ss_pred EeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHH
Q 012333 212 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIG 291 (466)
Q Consensus 212 ~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~ 291 (466)
.........+++.+.++++.+.+.|+++.+|+...... ...++.+.....+..+.|+..+++++++
T Consensus 214 ~~~~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd~a~--------------~~~l~a~~~~~~~~~i~h~~~~~~~~~~ 279 (404)
T PF07969_consen 214 VHISGLPSFDPEELEELVRAAREAGLQVAVHAIGDRAI--------------DEALDAIEAARARGRIEHAELIDPDDIE 279 (404)
T ss_dssp EEETC--SSSHHHHHHHHHHHHHCT-EEEEEEESHHHH--------------HHHHHHHHHHTCCHEEEEHCBCCHHHHH
T ss_pred ccccccccccchhHHHHHHHHHhcCCeeEEEEcCCchH--------------HhHHHHHHhhcccceeeccccCCHHHHH
Confidence 34455566777779999999999999999999553322 2233333333232379999999999999
Q ss_pred HHHhcCCeEEECccch--------------hhccCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhccccc
Q 012333 292 LLSRAGVKVSHCPASA--------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREV 357 (466)
Q Consensus 292 ~~~~~g~~~~~~p~~~--------------~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (466)
++++.++.+.++|... .+.....+++.++++|+++++|||++.. ..+++..+..+.........
T Consensus 280 ~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gsD~p~~--~~~P~~~~~~~~~~~~~~~~ 357 (404)
T PF07969_consen 280 RMAELGVTASVQPHFLFSWGGEWYEERLGPERARRIYPIRSLLDAGVRVALGSDAPVS--PPNPFRGIWAAVTRQMAGER 357 (404)
T ss_dssp HHHHHTTEEEECCTHHHHETEETHHHHHHHHCGGGBTHHHHHHHCTTEEEE--TTTTS--SCCHHHHHHHHHHHHHCHHT
T ss_pred HHHHhCCccccChhHhhhccchhhhhhhhhHHHHHHhHHHHHHhccCceecCcCCccc--ccCcchhhhhhhcccccccc
Confidence 9999999999999211 1224568999999999999999999752 35678777766554443211
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEE
Q 012333 358 FANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 404 (466)
Q Consensus 358 ~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv 404 (466)
.......++.+|++|||+++|.+||+.+|+++++|+|++||.|||||
T Consensus 358 ~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~~Gsl~~Gk~AD~vV 404 (404)
T PF07969_consen 358 SGPVLGPEQRLSLEEALRAYTSNPARALGLEDRKGSLEPGKLADFVV 404 (404)
T ss_dssp HHHCCGGTGSSHHHHHHHHTTHHHHHHTT-TTTSSSSSTTSBS-EEE
T ss_pred ccccccccccCCHHHHHHHHhHHHHHHcCCCCCcceECCCCCcCeEC
Confidence 11111122569999999999999999999999889999999999997
No 105
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.86 E-value=9.4e-20 Score=154.09 Aligned_cols=355 Identities=16% Similarity=0.152 Sum_probs=187.9
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
+-+.|++|+-. +.. ...+++|++|||..=.+ +--+....+++.||+.|.++.|||||.....+.
T Consensus 14 lQFtNCrilR~---g~l-~~edlWVR~GRIldpe~---vFFeErt~Ad~riDCgG~IlaPGfIDlQiNGGf--------- 77 (407)
T KOG3892|consen 14 LQFTNCRILRG---GKL-LREDLWVRGGRILDPEK---VFFEERTVADERIDCGGRILAPGFIDLQINGGF--------- 77 (407)
T ss_pred eeeeeeEEeeC---Cce-eehheeEeCCeecCccc---ccceeccchhheeccCCeeecCceEEEEecCcc---------
Confidence 55789999952 233 34599999999974322 110011136689999999999999999988632
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeec----CccCHHHHHHHH--HHhCCeEEeecccccCC
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA----GGQHVSEMAKAV--ELLGLRACLVQSTMDCG 174 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~----~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~ 174 (466)
..+-....++.........++++++|+|+++.. +...+..+.... ...|.+..-.......+
T Consensus 78 ------------GvDFS~dte~~~eGvAlVAr~ll~hGvtsf~Pt~~tsp~~~YHkilP~ip~~~~~p~GaG~LG~HlEG 145 (407)
T KOG3892|consen 78 ------------GVDFSQDTEDVGEGVALVARQLLSHGVTSFCPTLVTSPPEVYHKILPQIPVKSGGPHGAGVLGLHLEG 145 (407)
T ss_pred ------------ccccccchhhhhhhHHHHHHHHHhcCCCcCCCccccCCchhhhhhccccccccCCCCccceeeeeccC
Confidence 112222333333333446688999999998762 222333322211 12233333334444566
Q ss_pred CCCCcccccCChHHHHHHHH----HHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCc---
Q 012333 175 EGLPASWAVRTTDDCIQSQK----ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP--- 247 (466)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~--- 247 (466)
++.+...+....+.++.... +.+..... .-+++++..-.+.. .- ..+.++.....|..+..-.....
T Consensus 146 PFIs~~KrG~HPE~~i~s~~~~~~~~l~~tYG-sleni~IvTlAPEl-~~----~~evi~~lv~~gitVslGHS~A~L~~ 219 (407)
T KOG3892|consen 146 PFISREKRGAHPEAHIRSFEADAFQDLLATYG-SLENIRIVTLAPEL-GG----AQEVIRALVARGITVSLGHSVADLRA 219 (407)
T ss_pred CccChhhcCCCHHHHHhccCccHHHHHHHHhC-CccceEEEEecccc-cC----cHHHHHHHHhcceEEeeccchhccCc
Confidence 66666666555665554221 11211111 12455553322221 11 23445555556666655322211
Q ss_pred chhHHHHh-------------hcCCCCchHHHHhhhccCCCC----eeEEEeecCChhhHHHHHhc---CCeEEECccch
Q 012333 248 YENQVVMD-------------TRKVDHGTVTFLDKIEFLQNN----LLSAHTVWVNHTEIGLLSRA---GVKVSHCPASA 307 (466)
Q Consensus 248 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~----~~~~H~~~~~~~~~~~~~~~---g~~~~~~p~~~ 307 (466)
.+.+.+.. .+-.+.+.+..+..-.+...+ -+++.+.+..+..++.+.+. |...+...-.+
T Consensus 220 gE~AV~sGat~ITHLFNAMlpfHHRDPGlvGLLtSd~lp~gr~iyyGiIsDG~HThpaALRIAyrthpqGLvLVTDAI~A 299 (407)
T KOG3892|consen 220 GEDAVWSGATFITHLFNAMLPFHHRDPGLVGLLTSDRLPAGRCIYYGIISDGTHTHPAALRIAYRTHPQGLVLVTDAIPA 299 (407)
T ss_pred HHHHHhccchHHHHHHHhccccccCCCceeEEeecCCCCCCCeEEEEEecCCccCChhHhhhhhhcCCCceEEEecchhh
Confidence 11111110 111111111111111111111 26778888888888877655 33333322222
Q ss_pred hhc-cCCccHHHH---HHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHH
Q 012333 308 MRM-LGFAPIKEM---LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAK 383 (466)
Q Consensus 308 ~~~-~~~~~~~~~---~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~ 383 (466)
.-+ .+...+.+. .+.+-...-||..... +--.|-...+-.. .+.+.|.+-|++++|..||+
T Consensus 300 LGl~~GvH~lGqq~v~Vkgl~A~~aGT~Tl~G-SiApMd~CvRhf~--------------kATgCs~e~AleaAtlhPAq 364 (407)
T KOG3892|consen 300 LGLGNGVHTLGQQEVEVKGLTAYVAGTKTLSG-SIAPMDVCVRHFL--------------KATGCSMESALEAATLHPAQ 364 (407)
T ss_pred cccccccccccceeEEEcceEEEeeccccccc-cccCcHHHHHHHH--------------HhcCCcHHHHHhhhccChHH
Confidence 211 111111110 0000111113322111 1112233333221 12368999999999999999
Q ss_pred HcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEEC
Q 012333 384 SVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 444 (466)
Q Consensus 384 ~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~ 444 (466)
.||+++.+|.|..|.+||||++|.+ ..|..||+.|+.|++.
T Consensus 365 lLg~ek~KGTLDfG~dADFVllDd~--------------------l~V~aT~isG~~V~~a 405 (407)
T KOG3892|consen 365 LLGLEKSKGTLDFGADADFVLLDDS--------------------LHVQATYISGELVWQA 405 (407)
T ss_pred hhccccccccccccccCceEEEccc--------------------eEEEEEEEccEEEEec
Confidence 9999999999999999999999998 6999999999999874
No 106
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=99.85 E-value=9.8e-20 Score=171.34 Aligned_cols=262 Identities=20% Similarity=0.226 Sum_probs=151.2
Q ss_pred cEEeecccccccCCcccccccccCCCCchHhhhhccccccCCCC-hhHHHHHHHHHHHHHHhcCceeeeecCcc-----C
Q 012333 76 QILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMT-EEDSYISTLLCGIELIHSGVTCFAEAGGQ-----H 149 (466)
Q Consensus 76 ~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-----~ 149 (466)
++|+||+||+|+|+.. .... ..+ ......++++.+||||+++|+.. .
T Consensus 1 ~~vlPG~iD~HvH~r~------------------------pg~~~~~e---~~~t~t~aA~~GG~Ttv~~mpn~~p~~~~ 53 (337)
T cd01302 1 LLVLPGFIDIHVHLRD------------------------PGGTTYKE---DFESGSRAAAAGGVTTVIDMPNTGPPPID 53 (337)
T ss_pred CEecCCeeEeeeccCC------------------------CCCCCchh---HHHHHHHHHHhCCCcEEEECCCCCCCCCc
Confidence 5899999999999832 1111 111 22334577899999999998742 2
Q ss_pred HHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeeccc--ccCCHHHHHH
Q 012333 150 VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI--MNATDRLLLE 227 (466)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~l~~ 227 (466)
...+.........+.......... .... ..+.+ +.++.+.+...++.+...... ...+.+.+.+
T Consensus 54 ~~~~~~~~~~a~~~~~~d~~~~~~---~~~~-------~~~~e----l~~l~~~Gv~g~K~f~~~~~~~~~~~~~~~l~~ 119 (337)
T cd01302 54 LPAIELKIKLAEESSYVDFSFHAG---IGPG-------DVTDE----LKKLFDAGINSLKVFMNYYFGELFDVDDGTLMR 119 (337)
T ss_pred HHHHHHHHHHhCcCcEeeEEEEEe---ccCc-------cCHHH----HHHHHHcCCcEEEEEEeccCCCccccCHHHHHH
Confidence 233333333322222221111110 1110 01122 222333444556665533221 1457788889
Q ss_pred HHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCe--EEECc
Q 012333 228 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCP 304 (466)
Q Consensus 228 ~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~--~~~~p 304 (466)
.++.+++.+.++.+|+.. .. ......+.+..+.|...- +-+.++.+++.|+. +.+||
T Consensus 120 ~~~~~~~~g~~v~~H~Er-----------------~~---~la~~~g~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~p 179 (337)
T cd01302 120 TFLEIASRGGPVMVHAER-----------------AA---QLAEEAGANVHIAHVSSGEALELIKFAKNKGVKVTCEVCP 179 (337)
T ss_pred HHHHHHhcCCeEEEeHHH-----------------HH---HHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcCh
Confidence 999999999999999861 11 112223344556665532 12445555666655 45677
Q ss_pred cchhh------c--------------cCCccHHHHHHcCCcEEEccCCCCCCCCC-----CHHH--------HHHHHHHH
Q 012333 305 ASAMR------M--------------LGFAPIKEMLHADICVSLGTDGAPSNNRM-----SIVD--------EMYLASLI 351 (466)
Q Consensus 305 ~~~~~------~--------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~-----~~~~--------~~~~~~~~ 351 (466)
+.... . .....++..+..|+..+++|||.|..... +++. +.....+.
T Consensus 180 h~L~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~~~~~~a~~G~~g~e~~l~~~~ 259 (337)
T cd01302 180 HHLFLDESMLRLNGAWGKVNPPLRSKEDREALWEGVKNGKIDTIASDHAPHSKEEKESGKDIWKAPPGFPGLETRLPILL 259 (337)
T ss_pred hhheeCHHHhhCCCceEEEeCCCCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHhccCCCcccCCCCcccHHHHHHHHH
Confidence 64210 0 11234566788999999999998864210 1111 11111112
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC
Q 012333 352 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (466)
Q Consensus 352 ~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~ 408 (466)
+... ..+++++++++++|.|||+++|+.+ +|+|++|++|||+|||.+
T Consensus 260 ~~~~---------~~~i~~~~~~~~~s~~pA~~~gl~~-~g~i~~G~~ADlvi~d~~ 306 (337)
T cd01302 260 TEGV---------KRGLSLETLVEILSENPARIFGLYP-KGTIAVGYDADLVIVDPK 306 (337)
T ss_pred HHHH---------hcCCCHHHHHHHHHHHHHHHcCCCC-CCccccCCcCCEEEEeCC
Confidence 1110 1258999999999999999999954 699999999999999998
No 107
>PRK06886 hypothetical protein; Validated
Probab=99.85 E-value=4.5e-19 Score=163.43 Aligned_cols=271 Identities=19% Similarity=0.192 Sum_probs=177.7
Q ss_pred cccccccCCccccccccc-----CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeec-------Ccc
Q 012333 81 GFVNTHVHTSQQLAKGIA-----DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA-------GGQ 148 (466)
Q Consensus 81 G~ID~H~H~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~-------~~~ 148 (466)
||||+|+|++.++..+.. ....+.+-+. .+......++.++.+.++...+..++.+|+|.++.. +-.
T Consensus 21 gfv~~H~HlDk~~~~~~~~~~~~~~g~l~e~i~-~~~~~k~~~t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~~~~l~ 99 (329)
T PRK06886 21 GWVNAHAHADRAFTMTPEKIAIYHYANLQQKWD-LVDEVKRNSTVEDYYARFSQAIELMISQGVTAFGTFVDIDPICEDR 99 (329)
T ss_pred CCccccccccccccCCCccccccCCCCHHHHHH-HHHHHhccCCHHHHHHHHHHHHHHHHHcCcccEeeeeccCCCcccc
Confidence 899999999987654431 1222333322 222335567888889999999999999999998653 222
Q ss_pred CHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeeccc----ccCCHHH
Q 012333 149 HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI----MNATDRL 224 (466)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~ 224 (466)
.+..+.+..++..-++.+....+ ...|+. .... .+.+++..+. .+.+. +.+.. ...+.+.
T Consensus 100 ~~~a~~~~r~~~~~~idlq~vaf-Pq~g~~----~~~~-------~~l~~~al~~-advvG---GiP~~~~~~~~~~~e~ 163 (329)
T PRK06886 100 AIIAAHKAREVYKHDIILKFANQ-TLKGVI----EPTA-------KKWFDIGSEM-VDMIG---GLPYRDELDYGRGLEA 163 (329)
T ss_pred HHHHHHHHHHHhcCcceEEEEec-Chhhcc----CccH-------HHHHHHHHHh-CCEEe---CccCCcCCCCCCCHHH
Confidence 34444444444333332222111 111221 1111 1222222222 12222 22222 2456788
Q ss_pred HHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhh-------HHHHHhcC
Q 012333 225 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE-------IGLLSRAG 297 (466)
Q Consensus 225 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-------~~~~~~~g 297 (466)
+..++++|+++|+++.+|+.+........... ........++. .+++++|+..++..+ ++++++.|
T Consensus 164 l~~~~~lA~~~g~~Id~Hlde~~~~~~~~le~------l~~~~~~~Gl~-grV~~sH~~~L~~~~~~~~~~~i~~La~ag 236 (329)
T PRK06886 164 MDILLDTAKSLGKMVHVHVDQFNTPKEKETEQ------LCDKTIEHGMQ-GRVVAIHGISIGAHSKEYRYRLYQKMREAD 236 (329)
T ss_pred HHHHHHHHHHcCCCeEEeECCCCchhHHHHHH------HHHHHHHcCCC-CCEEEEEeccccCcChhhHHHHHHHHHHcC
Confidence 99999999999999999999876554332221 11112244554 479999999999765 99999999
Q ss_pred CeEEECccchhh----------ccCCccHHHHHHcCCcEEEccCCCCC----CCCCCHHHHHHHHHHHhcccccccCCCC
Q 012333 298 VKVSHCPASAMR----------MLGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTT 363 (466)
Q Consensus 298 ~~~~~~p~~~~~----------~~~~~~~~~~~~~gi~~~~gsD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (466)
+.+++||.+++. ..+.+|+.++++.||++++|||+... ....++++.++.+....+.
T Consensus 237 i~Vv~~P~snl~l~~~~~~~p~~rGv~pv~eL~~aGV~V~lGtDnv~D~~~p~g~~Dmle~~~l~~~~~~~--------- 307 (329)
T PRK06886 237 MMVIACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVALGTDNICDYMVPLCEGDMWQELSLLAAGCRF--------- 307 (329)
T ss_pred CeEEECchhhhhhccccccCcCCCCCCCHHHHHHCCCeEEEecCCCcccCCCCCCCCHHHHHHHHHHHcCC---------
Confidence 999999998753 25678999999999999999998631 2357999999987655432
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 364 DPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 364 ~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
.++.++++++|.++|+.+|++
T Consensus 308 ----~~~~~~l~maT~~gAraLgl~ 328 (329)
T PRK06886 308 ----YDLDEMVNIASINGRKVLGLE 328 (329)
T ss_pred ----CCHHHHHHHHhhhHHHHhCCC
Confidence 468999999999999999984
No 108
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.85 E-value=5.5e-20 Score=168.88 Aligned_cols=163 Identities=18% Similarity=0.213 Sum_probs=119.5
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCe
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~ 299 (466)
.+.+.+.++++.|+++|+++.+|+............ .+. .+..| ..+.+.++.+++.|+.
T Consensus 160 ~~~~~~~~iv~~A~~~gl~vasH~d~~~~~v~~a~~--------------~Gv----~~~E~--p~t~e~a~~a~~~G~~ 219 (325)
T cd01306 160 YAPANRSELAALARARGIPLASHDDDTPEHVAEAHE--------------LGV----VISEF--PTTLEAAKAARELGLQ 219 (325)
T ss_pred cCHHHHHHHHHHHHHCCCcEEEecCCChHHHHHHHH--------------CCC----eeccC--CCCHHHHHHHHHCCCE
Confidence 346789999999999999999999765332221111 111 11233 3578899999999999
Q ss_pred EEECccchhhc---cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 012333 300 VSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (466)
Q Consensus 300 ~~~~p~~~~~~---~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 376 (466)
++++++..++. .+..+++.+++.|+.++++||+.+. +++...... .. ..++++++++++
T Consensus 220 vv~gapn~lrg~s~~g~~~~~~ll~~Gv~~al~SD~~p~----sll~~~~~l--a~------------~~gl~l~eAl~~ 281 (325)
T cd01306 220 TLMGAPNVVRGGSHSGNVSARELAAHGLLDILSSDYVPA----SLLHAAFRL--AD------------LGGWSLPEAVAL 281 (325)
T ss_pred EEecCcccccCccccccHhHHHHHHCCCeEEEEcCCCcH----hHHHHHHHH--HH------------HcCCCHHHHHHH
Confidence 99887665543 3456789999999999999999653 233221111 11 125999999999
Q ss_pred HhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEcc
Q 012333 377 ATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNG 438 (466)
Q Consensus 377 ~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G 438 (466)
+|.|||+++|++ ++|+|++|+.||||+++.+. ....+..||++|
T Consensus 282 aT~nPA~~lGl~-d~G~I~~G~~ADlvvvd~~~-----------------~~p~v~~v~~~G 325 (325)
T cd01306 282 VSANPARAVGLT-DRGSIAPGKRADLILVDDMD-----------------GVPVVRTVWRGG 325 (325)
T ss_pred HhHHHHHHcCCC-CCCCcCCCCCCCEEEEeCCC-----------------CCCccceEEeCc
Confidence 999999999996 57999999999999999971 113788899887
No 109
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.78 E-value=5.8e-17 Score=149.39 Aligned_cols=259 Identities=24% Similarity=0.339 Sum_probs=173.0
Q ss_pred ccccccCCcccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC--------HHHH
Q 012333 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEM 153 (466)
Q Consensus 82 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~--------~~~~ 153 (466)
|||+|+|+.....++....... .| ....++.+.+........+++++||||+.+++... ...+
T Consensus 1 ~ID~H~H~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~ 71 (275)
T cd01292 1 FIDTHVHLDGSALRGTRLNLEL-KE--------AEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAV 71 (275)
T ss_pred CcccchhhHHHHHccCCCcccc-cc--------ccccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHH
Confidence 7999999987655543221111 11 34566666677777788999999999999976432 3555
Q ss_pred HHHHHHh-CCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeeccccc---CCHHHHHHHH
Q 012333 154 AKAVELL-GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMN---ATDRLLLETR 229 (466)
Q Consensus 154 ~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~l~~~~ 229 (466)
.+..... |++............ .. .....+...+.+......+... +....... .+.+.+.+++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~i~~~~~~~~~g----i~~~~~~~~~~~~~~~~~~~~ 139 (275)
T cd01292 72 AEAARASAGIRVVLGLGIPGVPA----AV----DEDAEALLLELLRRGLELGAVG----LKLAGPYTATGLSDESLRRVL 139 (275)
T ss_pred HHHHHHhcCeeeEEeccCCCCcc----cc----chhHHHHHHHHHHHHHhcCCee----EeeCCCCCCCCCCcHHHHHHH
Confidence 6666666 777765544432111 00 1122222333343333211222 23333322 3778999999
Q ss_pred HHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhh
Q 012333 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR 309 (466)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~ 309 (466)
+.++++++++.+|+.+.... .......++.... +.+.++.|+...+++.++.+++.|+.+.+||.++..
T Consensus 140 ~~a~~~~~~i~~H~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 208 (275)
T cd01292 140 EEARKLGLPVVIHAGELPDP----------TRALEDLVALLRL-GGRVVIGHVSHLDPELLELLKEAGVSLEVCPLSNYL 208 (275)
T ss_pred HHHHHcCCeEEEeeCCcccC----------ccCHHHHHHHHhc-CCCEEEECCccCCHHHHHHHHHcCCeEEECCccccc
Confidence 99999999999999775432 0012223333322 567899999999999999999999999999998765
Q ss_pred c----cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 012333 310 M----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (466)
Q Consensus 310 ~----~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~ 384 (466)
. ....+++.+++.|+++++|||+++.....+++..++.+....+. +++.+++++++|.|||++
T Consensus 209 ~~~~~~~~~~~~~~~~~g~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 209 LGRDGEGAEALRRLLELGIRVTLGTDGPPHPLGTDLLALLRLLLKVLRL------------GLSLEEALRLATINPARA 275 (275)
T ss_pred ccCCcCCcccHHHHHHCCCcEEEecCCCCCCCCCCHHHHHHHHHHHHhc------------CCCHHHHHHHHhccccCC
Confidence 3 55678999999999999999998653445788887776544321 279999999999999974
No 110
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.78 E-value=2.2e-18 Score=161.18 Aligned_cols=77 Identities=39% Similarity=0.532 Sum_probs=58.6
Q ss_pred CccHHHHHHcCCcEEEccCCCCCC--CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCc
Q 012333 313 FAPIKEMLHADICVSLGTDGAPSN--NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDND 390 (466)
Q Consensus 313 ~~~~~~~~~~gi~~~~gsD~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~ 390 (466)
...++.+++.|++++++||+.+.. ....++..+...... .++|++++++++|+|||++||++++
T Consensus 226 ~~~~~~l~~~Gv~~~l~sD~~~~~~~~~~~~~~~~~~~~~~--------------~gl~~~~al~~~T~~pA~~lgl~~~ 291 (304)
T PF13147_consen 226 RAALRELLEAGVPVALGSDHAPSSTEGSGDLLHEAMRLAVR--------------AGLSPEEALRAATSNPARILGLDDD 291 (304)
T ss_dssp HHHHHHHHHTTSSEEEEE-BBTTTTTCTTTHHHHHHHHHHH--------------TSSTHHHHHHHHTHHHHHHTTBTTT
T ss_pred hHHHHHHHhCCCeEEEEcCCcccccccccccchhhhhHHhh--------------cCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 456778999999999999998642 223344443332221 1599999999999999999999888
Q ss_pred ccccccCCccCEE
Q 012333 391 IGSLEAGKKADMV 403 (466)
Q Consensus 391 ~G~i~~G~~ADlv 403 (466)
+|+|++||+||||
T Consensus 292 ~G~i~~G~~ADlv 304 (304)
T PF13147_consen 292 KGSIAPGKDADLV 304 (304)
T ss_dssp SSSTSTTSB-EEE
T ss_pred CccCCCCCCCCcC
Confidence 9999999999997
No 111
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=99.71 E-value=1.6e-15 Score=142.01 Aligned_cols=71 Identities=15% Similarity=0.143 Sum_probs=52.2
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCC-------cCCcccceecccCCCCeeEEEEcc
Q 012333 367 ALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVP-------VHDRITSLVYCMRTENVVSVMCNG 438 (466)
Q Consensus 367 ~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~-------~~~~~~~~~~~~~~~~v~~v~v~G 438 (466)
.+++.++++.+|.|||+++|+.. + .+||||+|++ .|+... -.+|+....+ .++|..||++|
T Consensus 260 ~i~l~~l~~~~s~nPAk~~gl~~-------~-~~~lvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l---~G~v~~ti~rG 328 (344)
T cd01316 260 RLTIEDIVDRLHTNPKRIFNLPP-------Q-SDTYVEVDLDEEWTIPKNPLQSKKGWTPFEGKKV---KGKVQRVVLRG 328 (344)
T ss_pred CCCHHHHHHHHHHhHHHHhCCCC-------C-CCCEEEEeCCCcEEEChhhccccCCCCCCCCCEE---eeEEEEEEECC
Confidence 49999999999999999999854 2 3479999987 333221 1223322211 35899999999
Q ss_pred EEEEECCeee
Q 012333 439 QWVMKNKKIL 448 (466)
Q Consensus 439 ~~v~~~g~~~ 448 (466)
++||++|++.
T Consensus 329 ~~v~~~g~~~ 338 (344)
T cd01316 329 ETAFIDGEIV 338 (344)
T ss_pred EEEEECCEEc
Confidence 9999999875
No 112
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=99.70 E-value=4.3e-15 Score=139.93 Aligned_cols=247 Identities=18% Similarity=0.166 Sum_probs=164.5
Q ss_pred ccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeec--C----c--cC--------HHHHHHHHHHh
Q 012333 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA--G----G--QH--------VSEMAKAVELL 160 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~--~----~--~~--------~~~~~~~~~~~ 160 (466)
...+.++.+|+..+.|..+...++++.+......+.++++.|||++--. + . .. ...+.++..+.
T Consensus 45 ~~~~~~l~~~l~~~~~~~~~~~~~ed~~~~~~~~~~e~~~~Gvt~~E~~~~p~~~~~~~~~~~~~~~~~~~ai~~~~~~~ 124 (325)
T cd01320 45 AYNFSDLQDFLAKYDFGLSVLQTEEDFERLAYEYLEDAAADGVVYAEIRFSPQLHTRRGLSFDEVVEAVLRGLDEAEAEF 124 (325)
T ss_pred cccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeCchhhccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3456677889988888888888888888888889999999999965211 1 0 01 12334444556
Q ss_pred CCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccc
Q 012333 161 GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 240 (466)
Q Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 240 (466)
|++..+....... .+ .....+..+...++.. +..+.+.+.... ...+.+.+..+++.|++.|+++.
T Consensus 125 gi~~~l~~~~~~~---~~--------~~~~~~~~~~~~~~~~--~~vvg~~l~~~~-~~~~~~~~~~~~~~A~~~g~~v~ 190 (325)
T cd01320 125 GIKARLILCGLRH---LS--------PESAQETLELALKYRD--KGVVGFDLAGDE-VGFPPEKFVRAFQRAREAGLRLT 190 (325)
T ss_pred CCeEEEEEEecCC---CC--------HHHHHHHHHHHHhccC--CCEEEeecCCCC-CCCCHHHHHHHHHHHHHCCCceE
Confidence 8887664433211 01 1122222333333322 122333232222 23477889999999999999999
Q ss_pred eeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC--hhhHHHHHhcCCeEEECccchhhcc-----CC
Q 012333 241 MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRML-----GF 313 (466)
Q Consensus 241 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~g~~~~~~p~~~~~~~-----~~ 313 (466)
+|+.+...... ....++.++ . ..+.||.+++ ++.++++++.|+.+++||.+++... ..
T Consensus 191 ~H~~E~~~~~~-----------~~~a~~~~g---~-~~i~H~~~l~~~~~~~~~l~~~gi~v~~~P~sn~~l~~~~~~~~ 255 (325)
T cd01320 191 AHAGEAGGPES-----------VRDALDLLG---A-ERIGHGIRAIEDPELVKRLAERNIPLEVCPTSNVQTGAVKSLAE 255 (325)
T ss_pred EeCCCCCCHHH-----------HHHHHHHcC---C-cccchhhccCccHHHHHHHHHcCCeEEECCCccccccccCCccc
Confidence 99987532211 111222222 1 2378999994 6689999999999999999988652 25
Q ss_pred ccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 314 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 314 ~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
.|++.+++.|+++++|||.++... .+++.+++.+.... ++++.+ +..+|.|+++...+.
T Consensus 256 ~p~~~l~~~Gv~v~lgTD~~~~~~-~~~~~e~~~~~~~~--------------~l~~~e-l~~~~~na~~~~f~~ 314 (325)
T cd01320 256 HPLRELLDAGVKVTINTDDPTVFG-TYLTDEYELLAEAF--------------GLTEEE-LKKLARNAVEASFLS 314 (325)
T ss_pred ChHHHHHHCCCEEEECCCCCcccC-CCHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHhCCC
Confidence 799999999999999999875433 57888887764321 489999 556889999998764
No 113
>PRK09358 adenosine deaminase; Provisional
Probab=99.70 E-value=6.8e-15 Score=139.22 Aligned_cols=249 Identities=17% Similarity=0.157 Sum_probs=168.0
Q ss_pred ccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceee---eecCc-----cC--------HHHHHHHHH
Q 012333 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCF---AEAGG-----QH--------VSEMAKAVE 158 (466)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv---~~~~~-----~~--------~~~~~~~~~ 158 (466)
++.....++.+|+..+.|+.....++++.+......+.++++.|||++ .++.. .. ...+.++..
T Consensus 51 r~~~~~~~l~~~l~~~~~~~~~~~t~ed~~~~~~~~~~e~~~~Gvty~E~~~~p~~~~~~gl~~~~~~~a~~~~~~~a~~ 130 (340)
T PRK09358 51 RAAYDFRDLQSFLDKYDAGVAVLQTEEDLRRLAFEYLEDAAADGVVYAEIRFDPQLHTERGLPLEEVVEAVLDGLRAAEA 130 (340)
T ss_pred cccccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeChhhhhhcCCCHHHHHHHHHHHHHHHHH
Confidence 444556678899999888888888888888888889999999999975 22210 00 123344455
Q ss_pred HhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeeccc-ccCCHHHHHHHHHHHHHcCC
Q 012333 159 LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI-MNATDRLLLETRDMAREFKT 237 (466)
Q Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~l~~~~~~a~~~~~ 237 (466)
..|++..+..+.... . ..........+.++.+. ....+. +++.+. ...+++.+.++++.|++.|+
T Consensus 131 ~~gi~~~li~~~~r~---~-------~~~~~~~~~~~~~~~~~--~~~vvg--~~l~g~e~~~~~~~~~~~~~~A~~~g~ 196 (340)
T PRK09358 131 EFGISVRLILCFMRH---F-------GEEAAARELEALAARYR--DDGVVG--FDLAGDELGFPPSKFARAFDRARDAGL 196 (340)
T ss_pred hcCceEEEEEEecCC---C-------CHHHHHHHHHHHHHHhc--CCcEEE--EeCCCcCCCCCHHHHHHHHHHHHHCCC
Confidence 568887666544321 1 11122222233333322 223333 333322 34567889999999999999
Q ss_pred ccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC--hhhHHHHHhcCCeEEECccchhhcc----
Q 012333 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRML---- 311 (466)
Q Consensus 238 ~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~g~~~~~~p~~~~~~~---- 311 (466)
++++|+.+...... ....+..++ . ..+.||.+++ ++.++++++.|+.+.+||.+++...
T Consensus 197 ~~~~H~~E~~~~~~-----------~~~al~~lg---~-~ri~Hg~~l~~~~~~~~~l~~~gi~v~~cP~Sn~~l~~~~~ 261 (340)
T PRK09358 197 RLTAHAGEAGGPES-----------IWEALDELG---A-ERIGHGVRAIEDPALMARLADRRIPLEVCPTSNVQTGAVPS 261 (340)
T ss_pred CeEEcCCCCCchhH-----------HHHHHHHcC---C-cccchhhhhccCHHHHHHHHHcCCeEEECCCccccccccCC
Confidence 99999987543211 111222222 1 2378999995 5679999999999999999998762
Q ss_pred -CCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 312 -GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 312 -~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
+..|+++++++|+++++|||.+... ..+++.+++.+.... +++++++ ..++.|+.+...++
T Consensus 262 ~~~~pi~~l~~~Gv~v~lgTD~~~~~-~~~l~~e~~~~~~~~--------------~l~~~el-~~l~~nai~~sf~~ 323 (340)
T PRK09358 262 LAEHPLKTLLDAGVRVTINTDDPLVF-GTTLTEEYEALAEAF--------------GLSDEDL-AQLARNALEAAFLS 323 (340)
T ss_pred cccChHHHHHHCCCEEEECCCCCccc-CCCHHHHHHHHHHHh--------------CCCHHHH-HHHHHHHHHHHCCC
Confidence 4589999999999999999987554 358999988765421 4999995 56678888887664
No 114
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=99.69 E-value=4.9e-15 Score=139.19 Aligned_cols=242 Identities=18% Similarity=0.206 Sum_probs=165.2
Q ss_pred CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-c----------------CHHHHHHHHHHhCC
Q 012333 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-Q----------------HVSEMAKAVELLGL 162 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-~----------------~~~~~~~~~~~~g~ 162 (466)
..++.+|+....|+.+...+.++.+......+.++++.||| ..++-. + ....+.++..+.|+
T Consensus 47 ~~~l~~~l~~~~~~~~~~~t~e~l~~~~~~~~~e~~~~Gv~-y~E~r~~p~~~~~~g~~~~~~~~~~~~~i~~a~~~~gi 125 (324)
T TIGR01430 47 FRDLQDFLAKYDFGVEVLRTEDDFKRLAYEYVEKAAKDGVV-YAEVFFDPQLHTNRGISPDTVVEAVLDGLDEAERDFGI 125 (324)
T ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeCccccccCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 45688899988888888888888888888889999999995 444310 1 11233445556788
Q ss_pred eEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeeccc-ccCCHHHHHHHHHHHHHcCCccce
Q 012333 163 RACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI-MNATDRLLLETRDMAREFKTGIHM 241 (466)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~l~~~~~~a~~~~~~v~~ 241 (466)
+..+..+..+.. ..+...+..+....+.. ...+. ++..+. ...+.+.+.++++.|++.|+++.+
T Consensus 126 ~~~li~~~~r~~-----------~~~~~~~~~~~~~~~~~--~~vvg--~~l~~~e~~~~~~~~~~~~~~A~~~g~~i~~ 190 (324)
T TIGR01430 126 KSRLILCGMRHK-----------QPEAAEETLELAKPYKE--QTIVG--FGLAGDERGGPPPDFVRAFAIARELGLHLTV 190 (324)
T ss_pred eEEEEEEEeCCC-----------CHHHHHHHHHHHHhhcc--CcEEE--ecCCCCCCCCCHHHHHHHHHHHHHCCCCeEE
Confidence 875555444311 01122222222222221 12233 333322 345578899999999999999999
Q ss_pred eccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecC--ChhhHHHHHhcCCeEEECccchhhcc-----CCc
Q 012333 242 HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRML-----GFA 314 (466)
Q Consensus 242 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~~g~~~~~~p~~~~~~~-----~~~ 314 (466)
|+.+...... ....+..++. ..+.||.++ +++.++.+++.|+.+++||.+++... ...
T Consensus 191 Ha~E~~~~~~-----------~~~~~~~~g~----~ri~Hg~~l~~~~~~i~~l~~~gi~v~~cP~Sn~~l~~~~~~~~~ 255 (324)
T TIGR01430 191 HAGELGGPES-----------VREALDDLGA----TRIGHGVRALEDPELLKRLAQENITLEVCPTSNVALGVVKSLAEH 255 (324)
T ss_pred ecCCCCChHH-----------HHHHHHHcCc----hhcchhhhhccCHHHHHHHHHcCceEEECCcccccccccCCcccC
Confidence 9997632111 1111222221 247999999 56789999999999999999998763 267
Q ss_pred cHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 315 ~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
|++.++++|+++++|||.+..... +++.+++.+.... ++++.+ +..+|.|+++.+.++
T Consensus 256 pi~~l~~~Gv~v~igTD~~~~~~~-~l~~e~~~a~~~~--------------~l~~~e-l~~~~~na~~~~f~~ 313 (324)
T TIGR01430 256 PLRRFLEAGVKVTLNSDDPAYFGS-YLTEEYEIAAKHA--------------GLTEEE-LKQLARNALEGSFLS 313 (324)
T ss_pred hHHHHHHCCCEEEECCCCCcccCC-CHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHhCCC
Confidence 999999999999999998765433 8888888775421 499999 789999999998875
No 115
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=99.54 E-value=4.8e-15 Score=104.10 Aligned_cols=44 Identities=27% Similarity=0.663 Sum_probs=34.3
Q ss_pred EEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCc
Q 012333 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (466)
Q Consensus 43 v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~ 90 (466)
|+|+||||++|++.... +.++.++||++|++|+|||||+|+|+.
T Consensus 1 V~I~~g~I~~v~~~~~~----~~~~~~viD~~g~~v~PG~ID~H~H~~ 44 (68)
T PF13594_consen 1 VLIEDGKIVAVGPDSEL----PADAAEVIDAKGKYVMPGFIDMHTHLG 44 (68)
T ss_dssp EEEETTEEEEEESSCCT----TSTCCEEEEETTCEEEE-EEEEEE-TT
T ss_pred CEEECCEEEEeCCCCCC----CCCCCEEEECCCCEEeCCeEeeeeccc
Confidence 68999999999654432 224667899999999999999999974
No 116
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=99.51 E-value=1.6e-12 Score=122.78 Aligned_cols=161 Identities=9% Similarity=0.027 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHH-HHhhcCCCCchHHHHhhhcc-CCCCeeEEEeecCChhhHHHHHhc--
Q 012333 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQV-VMDTRKVDHGTVTFLDKIEF-LQNNLLSAHTVWVNHTEIGLLSRA-- 296 (466)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~H~~~~~~~~~~~~~~~-- 296 (466)
+.+.+.++++.+.+.|.++.+|+.+....... ..+. ............ .+.+.++.|.. +.+.++.+++.
T Consensus 111 d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~~~~~~e~----~~~~~~~~lA~~~p~~~v~i~Hvs--t~~~~~~i~~ak~ 184 (335)
T cd01294 111 DLEKIYPVLEAMQKLGMPLLVHGEVPDFKIDVLDREA----KFIPVLEPLAQRFPKLKIVLEHIT--TADAVEYVKSCNE 184 (335)
T ss_pred CHHHHHHHHHHHHHcCCeEEEecCCCcccccchhhHH----HHHHHHHHHHHHcCCCeEEEeccc--HHHHHHHHHhCCC
Confidence 45788999999999999999999764331100 0000 001112222221 24556667764 35556665543
Q ss_pred CCeEEECccchh-------h---c---cCCc---------cHHHHHHcCCcE-EEccCCCCCCCC----------CCHHH
Q 012333 297 GVKVSHCPASAM-------R---M---LGFA---------PIKEMLHADICV-SLGTDGAPSNNR----------MSIVD 343 (466)
Q Consensus 297 g~~~~~~p~~~~-------~---~---~~~~---------~~~~~~~~gi~~-~~gsD~~~~~~~----------~~~~~ 343 (466)
.+.+.+||+.-. . . .-.+ .+++.+..|... +++|||.|+... +..++
T Consensus 185 ~vt~Et~ph~L~l~~~~~~~~~~g~~~k~~PPlR~~~d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~~~~g~~Gi~~~~ 264 (335)
T cd01294 185 NVAATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKAATSGHPKFFLGSDSAPHPKSNKESSCGCAGIFSAP 264 (335)
T ss_pred CcEEEEchhHheeeHHHhcCCCCCCCeEEcCCCCCHHHHHHHHHHHHcCCCCeEEECCCCCCCCccccCCCCCccccCHH
Confidence 477778887432 1 0 0012 344667889888 599999887421 11122
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCC
Q 012333 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (466)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~ 398 (466)
.+....+ .. .. .++|++++++.+|.||||++||.+++|+|.+|.
T Consensus 265 ~~l~~~~-~~---------~~-~~l~l~~~v~~~s~nPA~i~gl~~~kg~i~~~~ 308 (335)
T cd01294 265 IALPYLA-EV---------FE-EHNALDKLEAFASDNGPNFYGLPPNKKTITLVK 308 (335)
T ss_pred HHHHHHH-HH---------Hh-ccCCHHHHHHHHHhHHHHHhCCCCCCCeEEEEe
Confidence 1111111 10 01 149999999999999999999977767666664
No 117
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=99.18 E-value=4.4e-09 Score=97.55 Aligned_cols=135 Identities=21% Similarity=0.247 Sum_probs=101.7
Q ss_pred CHHHHHHHHHHHHHcC-CccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh--hhHHHHHhcC
Q 012333 221 TDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEIGLLSRAG 297 (466)
Q Consensus 221 ~~~~l~~~~~~a~~~~-~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~g 297 (466)
+...+...++.+++.| +++.+|+.+.... ....+.+..+ ...+.||.++.. +.++.+++.+
T Consensus 151 ~~~~f~~~~~~ar~~g~l~~t~HaGE~~~~--------------~~v~~~~~~~--~~RIgHg~~~~~~p~~~~~l~~~~ 214 (305)
T cd00443 151 PLRDFYSYYEYARRLGLLGLTLHCGETGNR--------------EELLQALLLL--PDRIGHGIFLLKHPELIYLVKLRN 214 (305)
T ss_pred CHHHHHHHHHHHHHcCCcceEEeecCCCCh--------------HHHHHHHHhc--cceeeceEecCCCHHHHHHHHHcC
Confidence 5677888999999999 9999999986321 1222222222 345999999987 9999999999
Q ss_pred CeEEECccchhhccC-----CccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 012333 298 VKVSHCPASAMRMLG-----FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372 (466)
Q Consensus 298 ~~~~~~p~~~~~~~~-----~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~ 372 (466)
+.+.+||.+++.... ..|++.+++.|++++++||.+..... ++..+++.+.... +++.++
T Consensus 215 i~ie~CP~SN~~~~~~~~~~~hP~~~~~~~G~~v~i~TDd~~~~~~-~l~~E~~~~~~~~--------------~l~~~~ 279 (305)
T cd00443 215 IPIEVCPTSNVVLGTVQSYEKHPFMRFFKAGLPVSLSTDDPGIFGT-SLSEEYSLAAKTF--------------GLTFED 279 (305)
T ss_pred CEEEECcchhhhhcCCCChhhChHHHHHHCCCeEEEeCCCCcccCC-ChHHHHHHHHHHc--------------CcCHHH
Confidence 999999999987633 37899999999999999999865444 7888877664332 388888
Q ss_pred HHHHHhHHHHHHcCC
Q 012333 373 VLRMATINGAKSVLW 387 (466)
Q Consensus 373 al~~~T~~~A~~lgl 387 (466)
..+++ .|+-+...+
T Consensus 280 l~~l~-~nsi~~sf~ 293 (305)
T cd00443 280 LCELN-RNSVLSSFA 293 (305)
T ss_pred HHHHH-HHHHHHhcC
Confidence 77655 566555554
No 118
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=99.06 E-value=4.8e-08 Score=90.78 Aligned_cols=240 Identities=10% Similarity=0.015 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHhcCceeeeecCcc----CHHHHHHHHHHhCCeEEeecccccCCCCCCcccc-cCChHHHHHHHHHHH
Q 012333 123 SYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWA-VRTTDDCIQSQKELY 197 (466)
Q Consensus 123 ~~~~~~~~~~~~~~~GvTtv~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 197 (466)
.+..+...+..+.++|+|++++.+.. ......+..+..|++.+...++..... .+.+. ........+...+.+
T Consensus 30 ~~~~~~~~~~~~~~~Gvttiv~~~~~~~~~~~~~~~~~~~~~g~~v~~~~G~hp~~~--~~~~~~~~~~~~l~~~~~~~l 107 (293)
T cd00530 30 DVEAAKEELKRFRAHGGRTIVDATPPGIGRDVEKLAEVARATGVNIVAATGFYKDAF--YPEWVRLRSVEELTDMLIREI 107 (293)
T ss_pred hHHHHHHHHHHHHHcCCCeEEEcCCcccCcCHHHHHHHHHHhCCcEEEecccCCCcc--ChHHHhhCCHHHHHHHHHHHH
Confidence 34566667788999999999998753 355666777778887766555432110 01111 111111111111112
Q ss_pred HHhccCCC---CCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCC
Q 012333 198 AKHHHAAD---GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ 274 (466)
Q Consensus 198 ~~~~~~~~---~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (466)
....+... ..++-............+.++..+++|+++++++++|+.+.... .......+...+...
T Consensus 108 ~~~~~~~~i~~~~IGEigld~~~~~~q~~~f~~~~~lA~~~~~Pv~iH~~~~~~~----------~~~~l~~l~~~g~~~ 177 (293)
T cd00530 108 EEGIEGTGIKAGIIKEAGGSPAITPLEEKVLRAAARAQKETGVPISTHTQAGLTM----------GLEQLRILEEEGVDP 177 (293)
T ss_pred HhccccCCcCceEEEEeecCCCCCHHHHHHHHHHHHHHHHHCCeEEEcCCCCccc----------cHHHHHHHHHcCCCh
Confidence 11111100 11211111111222334467889999999999999998753111 011334444444444
Q ss_pred CCeeEEEee-cCChhhHHHHHhcCCeEEECccchhh---c----cCCccHHHHHHcCC--cEEEccCCCCCCCC------
Q 012333 275 NNLLSAHTV-WVNHTEIGLLSRAGVKVSHCPASAMR---M----LGFAPIKEMLHADI--CVSLGTDGAPSNNR------ 338 (466)
Q Consensus 275 ~~~~~~H~~-~~~~~~~~~~~~~g~~~~~~p~~~~~---~----~~~~~~~~~~~~gi--~~~~gsD~~~~~~~------ 338 (466)
.+.++.|+. .-+.+.++.+.+.|+.+.++...... . .....++++++.+. .+.++||.+...+.
T Consensus 178 ~~~vi~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ill~TD~p~~~~~~~~~~~ 257 (293)
T cd00530 178 SKVVIGHLDRNDDPDYLLKIAALGAYLEFDGIGKDKIFGYPSDETRADAVKALIDEGYGDRLLLSHDVFRKSYLEKRYGG 257 (293)
T ss_pred hheEEeCCCCCCCHHHHHHHHhCCCEEEeCCCCcccccCCCCHHHHHHHHHHHHHCCCcCCEEEeCCcCchhhhhhccCC
Confidence 456789998 45678899999999988876433211 0 11234677788876 67999998632110
Q ss_pred CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 012333 339 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (466)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 385 (466)
..+..-+....... ...+++.+++.++.+.||+++|
T Consensus 258 ~~~~~~~~~~~~~~-----------~~~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 258 HGYDYILTRFIPRL-----------RERGVTEEQLDTILVENPARFL 293 (293)
T ss_pred CChHHHHHHHHHHH-----------HHcCCCHHHHHHHHHHCHHHhC
Confidence 00111111111110 1125899999999999999875
No 119
>PTZ00124 adenosine deaminase; Provisional
Probab=98.97 E-value=1.3e-07 Score=88.80 Aligned_cols=137 Identities=15% Similarity=0.181 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecC--ChhhHHHHHhcCCeE
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKV 300 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~~g~~~ 300 (466)
....++++.|++.|+++.+|+.+....... ....+.+..++ . ..|.||..+ +++.++.+++.++.+
T Consensus 206 ~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~--------~~v~~ai~~l~---~-~RIGHG~~~~~d~~l~~~l~~~~I~l 273 (362)
T PTZ00124 206 KPFKDIFDYVREAGVNLTVHAGEDVTLPNL--------NTLYSAIQVLK---V-KRIGHGIRVAESQELIDMVKEKDILL 273 (362)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCcc--------hhHHHHHHHhC---C-CccccccccCCCHHHHHHHHHcCCeE
Confidence 456788899999999999999874210000 00111222221 1 348899998 478899999999999
Q ss_pred EECccchhhcc-----CCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 012333 301 SHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 375 (466)
Q Consensus 301 ~~~p~~~~~~~-----~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~ 375 (466)
.+||.++.... ...|++.+++.|++++++||.+.... .++..++..+... .+++.++..+
T Consensus 274 EvCPtSN~~~~~v~~~~~HPi~~l~~~Gv~v~InTDDp~~~~-t~l~~Ey~~~~~~--------------~gls~~~l~~ 338 (362)
T PTZ00124 274 EVCPISNVLLNNAKSMDTHPIRKLYDAGVKVSVNSDDPGMFL-TNINDDYEELYTH--------------LNFTLADFMK 338 (362)
T ss_pred EECCcchhhhhcCCchhhHHHHHHHHCCCcEEEeCCCccccC-CChhHHHHHHHHH--------------cCCCHHHHHH
Confidence 99999998662 23689999999999999999986532 3566665544221 2599988887
Q ss_pred HHhHHHHHHcCC
Q 012333 376 MATINGAKSVLW 387 (466)
Q Consensus 376 ~~T~~~A~~lgl 387 (466)
+ +.|+.+...+
T Consensus 339 l-~~nai~asF~ 349 (362)
T PTZ00124 339 M-NEWALEKSFL 349 (362)
T ss_pred H-HHHHHHHhcC
Confidence 6 4566665554
No 120
>PRK05451 dihydroorotase; Provisional
Probab=98.96 E-value=4.2e-08 Score=92.69 Aligned_cols=161 Identities=13% Similarity=0.148 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchH-HHHh-hh-ccCCCCeeEEEeecCChhhHHHHHhc-
Q 012333 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLD-KI-EFLQNNLLSAHTVWVNHTEIGLLSRA- 296 (466)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~~H~~~~~~~~~~~~~~~- 296 (466)
+++.+.++++.+.++|.++.+|+........... . ..... ..+. .. ...+.+..+.|.. +.+.++.+++.
T Consensus 116 dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~~---~-e~~~~~~~l~~lA~~~pg~~lhI~Hls--t~~~~e~i~~a~ 189 (345)
T PRK05451 116 DIEKIYPVLEAMQKLGMPLLVHGEVTDPDIDIFD---R-EAVFIDRVLEPLRRRFPKLKIVFEHIT--TKDAVDYVREAN 189 (345)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCccccccc---c-hHHHHHHHHHHHHHhcCCCcEEEEecC--cHHHHHHHHhcC
Confidence 6778899999999999999999976332110000 0 00001 1111 12 1224566677764 45556665543
Q ss_pred -CCeEEECccchhhc----------------------cCCccHHHHHHcCCcE-EEccCCCCCCCC-------C-CHHHH
Q 012333 297 -GVKVSHCPASAMRM----------------------LGFAPIKEMLHADICV-SLGTDGAPSNNR-------M-SIVDE 344 (466)
Q Consensus 297 -g~~~~~~p~~~~~~----------------------~~~~~~~~~~~~gi~~-~~gsD~~~~~~~-------~-~~~~~ 344 (466)
++.+.+||..-..- .....+++.+..|... +++|||.|+... . .++..
T Consensus 190 ~~it~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~~i~SDHaP~~~~~K~~~~G~~gi~~~ 269 (345)
T PRK05451 190 DNLAATITPHHLLINRNDMLVGGIRPHLYCLPILKRETHRQALREAATSGNPKFFLGTDSAPHARHAKESACGCAGIFSA 269 (345)
T ss_pred CCEEEEecHHHHhcCHHHHhCCCcCCCeEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChHHhCCCCCCCchhhH
Confidence 45566888743210 0112455678889898 799999987421 1 12221
Q ss_pred H-HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccC
Q 012333 345 M-YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAG 397 (466)
Q Consensus 345 ~-~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G 397 (466)
. ....+.. .+ .. +.+++++++++|+|||+++||.+++|+|.+|
T Consensus 270 ~~g~~~~~~----~~-----~~-~~~l~~~v~~~s~nPAkifGl~~~KG~i~~~ 313 (345)
T PRK05451 270 PAALELYAE----VF-----EE-AGALDKLEAFASLNGPDFYGLPRNTDTITLV 313 (345)
T ss_pred HHHHHHHHH----HH-----Hc-CCCHHHHHHHHhHHHHHHhCCCCCCCeEEEE
Confidence 1 0011111 00 01 2489999999999999999999999999888
No 121
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=98.94 E-value=1.3e-07 Score=88.98 Aligned_cols=162 Identities=12% Similarity=0.073 Sum_probs=92.2
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhh--hccCCCCeeEEEeecCChhhHHHHHhc--
Q 012333 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDK--IEFLQNNLLSAHTVWVNHTEIGLLSRA-- 296 (466)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~-- 296 (466)
++..+.++++.+++.|.++.+|+.+.......... -.......+.. ....+.+..+.|... .+.++.+++.
T Consensus 113 dd~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~~~~---e~~a~~~~i~~lA~~~~~~~~~i~H~st--~~~~~~i~~a~~ 187 (341)
T TIGR00856 113 DIDAIMPVLEAMEKIGLPLLLHGEVTHGDIDIFDR---EARFIESVLEPLRQRFPALKVVLEHITT--KDAIDYVEDGNN 187 (341)
T ss_pred CHHHHHHHHHHHHHcCCeEEEeecCCCCCcccccc---hhhhhHHHHHHHHHHccCCeEEEEecCc--HHHHHHHHHcCC
Confidence 44788999999999999999999764211110000 00001111111 122344555556542 3444444332
Q ss_pred CCeEEECccchhhc-----c-----------------CCccHHHHHHcCCcE-EEccCCCCCCCC----------CCHHH
Q 012333 297 GVKVSHCPASAMRM-----L-----------------GFAPIKEMLHADICV-SLGTDGAPSNNR----------MSIVD 343 (466)
Q Consensus 297 g~~~~~~p~~~~~~-----~-----------------~~~~~~~~~~~gi~~-~~gsD~~~~~~~----------~~~~~ 343 (466)
.+...+||+.-..- . ....+++.+..|... +++|||.|+... +.-.+
T Consensus 188 ~vt~E~~ph~L~l~~~~~~~~~~~~~~k~~PPlR~~~d~~aL~~~l~~G~id~~i~SDHaP~~~~~K~~~~~~~G~~g~e 267 (341)
T TIGR00856 188 RLAATITPQHLMFTRNDLLGGGVNPHLYCLPILKRNIHQQALLELAASGFPKFFLGTDSAPHARHRKESSCGCAGCFSAP 267 (341)
T ss_pred CEEEEEcHHHHhccHHHHhccCCCCceEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChhHcCCCCCCCCcccHH
Confidence 35666787643210 0 112445678889998 699999987421 11111
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEc
Q 012333 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVD 406 (466)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d 406 (466)
.+ ...+.. .. ..++|++++++++|.||||++|| ++ | +|||+|++
T Consensus 268 ~~-l~~~~~---------~~-~~~~~l~~~v~~~s~nPAk~~gl-~~-~------dAdi~~~~ 311 (341)
T TIGR00856 268 TA-LPSYAE---------VF-EEMNALENLEAFCSDNGPQFYGL-PV-N------STKIELVK 311 (341)
T ss_pred HH-HHHHHH---------HH-hcCCCHHHHHHHHhHhHHHHhCC-CC-C------CceEEEEe
Confidence 11 111111 00 11489999999999999999999 43 4 89999995
No 122
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=98.90 E-value=2e-07 Score=87.52 Aligned_cols=146 Identities=13% Similarity=0.107 Sum_probs=98.4
Q ss_pred CCHHHHHHHHHHHHHcC--CccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC--hhhHHHHHh
Q 012333 220 ATDRLLLETRDMAREFK--TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSR 295 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~--~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~ 295 (466)
.+.+.+..+++.|++.| +++.+|+.+...... .....+.+.+ .++ ...|.||..+. ++.++.+++
T Consensus 176 ~~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~~~~---------~~~~~v~~al-~lg-~~RIGHG~~~~~dp~ll~~l~~ 244 (345)
T cd01321 176 RPLLDFLPQLLWFPKQCAEIPFFFHAGETNGDGT---------ETDENLVDAL-LLN-TKRIGHGFALPKHPLLMDLVKK 244 (345)
T ss_pred CCHHHHHHHHHHHHHhCCCCceEeecCCCcCCCC---------CChhHHHHHH-HhC-CCcCccccccCcCHHHHHHHHH
Confidence 45677788899999999 999999988542100 0011122222 122 13488999985 788999999
Q ss_pred cCCeEEECccchhhcc-----CCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 012333 296 AGVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPA 370 (466)
Q Consensus 296 ~g~~~~~~p~~~~~~~-----~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 370 (466)
.++.+.+||.++.... ...|++.++++|++++++||.+......++..+.+.+.... .+.+++.
T Consensus 245 ~~I~lEvCPtSN~~~~~v~~~~~HPl~~ll~~Gv~vtinTDDp~~f~t~~l~~Ey~~~~~~~-----------g~~~l~~ 313 (345)
T cd01321 245 KNIAIEVCPISNQVLGLVSDLRNHPAAALLARGVPVVISSDDPGFWGAKGLSHDFYQAFMGL-----------APADAGL 313 (345)
T ss_pred cCCeEEECcchhhhhccccchhhChHHHHHHCCCeEEEeCCCcchhCCCCchHHHHHHHHHh-----------ccCCCCH
Confidence 9999999999998652 34689999999999999999986432224556655443211 1113888
Q ss_pred HHHHHHHhHHHHHHcCCC
Q 012333 371 ETVLRMATINGAKSVLWD 388 (466)
Q Consensus 371 ~~al~~~T~~~A~~lgl~ 388 (466)
++.. .++.|+.+...++
T Consensus 314 ~~l~-~l~~nsi~~sF~~ 330 (345)
T cd01321 314 RGLK-QLAENSIRYSALS 330 (345)
T ss_pred HHHH-HHHHHHHHHHCCC
Confidence 8866 4456777766653
No 123
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=98.85 E-value=2.2e-07 Score=84.36 Aligned_cols=137 Identities=11% Similarity=0.050 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEE
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~ 302 (466)
+.+...++.|+++++++.+|+...... ..+.+...+ ....++.|+..-+.+.+..+.+.|+.+.+
T Consensus 108 ~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~~--~~~~~i~H~~~~~~~~~~~~~~~g~~~~~ 172 (252)
T TIGR00010 108 EVFRAQLQLAEELNLPVIIHARDAEED-------------VLDILREEK--PKVGGVLHCFTGDAELAKKLLDLGFYISI 172 (252)
T ss_pred HHHHHHHHHHHHhCCCeEEEecCccHH-------------HHHHHHhcC--CCCCEEEEccCCCHHHHHHHHHCCCeEee
Confidence 667888999999999999999653221 233333332 12356778876667888888889999888
Q ss_pred CccchhhccCCccHHHHHHcC--CcEEEccCCCCCCC-----CCCHHHHHHH-HHHHhcccccccCCCCCCCCCCHHHHH
Q 012333 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN-----RMSIVDEMYL-ASLINKGREVFANGTTDPAALPAETVL 374 (466)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~g--i~~~~gsD~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ls~~~al 374 (466)
...... .....++++++.. -++.++||.+...+ ..+....+.. ...+... .+++.+++.
T Consensus 173 ~~~~~~--~~~~~~~~~i~~~~~dril~~TD~p~~~~~~~~~~~~~p~~i~~~~~~~a~~-----------~g~~~~~~~ 239 (252)
T TIGR00010 173 SGIVTF--KNAKSLREVVRKIPLERLLVETDSPYLAPVPYRGKRNEPAFVRYTVEAIAEI-----------KGMDVEELA 239 (252)
T ss_pred ceeEec--CCcHHHHHHHHhCCHHHeEecccCCCCCCCCCCCCCCCChhHHHHHHHHHHH-----------hCcCHHHHH
Confidence 864321 1112355566553 36899999863110 0011111111 1111111 159999999
Q ss_pred HHHhHHHHHHcCC
Q 012333 375 RMATINGAKSVLW 387 (466)
Q Consensus 375 ~~~T~~~A~~lgl 387 (466)
++++.||++++++
T Consensus 240 ~~~~~N~~~~~~~ 252 (252)
T TIGR00010 240 QITTKNAKRLFGL 252 (252)
T ss_pred HHHHHHHHHHhCc
Confidence 9999999999975
No 124
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=98.76 E-value=5.5e-07 Score=81.74 Aligned_cols=135 Identities=13% Similarity=0.083 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEE
Q 012333 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (466)
Q Consensus 222 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~ 301 (466)
.+.++..+++|+++++++.+|+...... ..+.+..++ ....++.|+..-+.+.++.+.+.|+.+.
T Consensus 107 ~~~~~~~~~~a~e~~~pv~iH~~~~~~~-------------~~~l~~~~~--~~~~~i~H~~~~~~~~~~~~~~~g~~~~ 171 (251)
T cd01310 107 KEVFRAQLELAKELNLPVVIHSRDAHED-------------VLEILKEYG--PPKRGVFHCFSGSAEEAKELLDLGFYIS 171 (251)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeeCchHH-------------HHHHHHhcC--CCCCEEEEccCCCHHHHHHHHHcCCEEE
Confidence 4567889999999999999998754211 223333332 1445677877656678888888999988
Q ss_pred ECccchhhccCCccHHHHHHcC--CcEEEccCCCCCCCCC------C--HHHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 012333 302 HCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNNRM------S--IVDEMYLASLINKGREVFANGTTDPAALPAE 371 (466)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~g--i~~~~gsD~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~ 371 (466)
+.+..... ....++.+++.. -++.++||++...... . .+..+...... ..+++.+
T Consensus 172 ~~~~~~~~--~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~la~-------------~~gl~~e 236 (251)
T cd01310 172 ISGIVTFK--NANELREVVKEIPLERLLLETDSPYLAPVPFRGKRNEPAYVKHVAEKIAE-------------LKGISVE 236 (251)
T ss_pred eeeeeccC--CCHHHHHHHHhCChHHEEEcccCCCCCCCCCCCCCCCChhHHHHHHHHHH-------------HHCcCHH
Confidence 88764221 111245555554 3689999986421110 0 11111111100 1259999
Q ss_pred HHHHHHhHHHHHHcC
Q 012333 372 TVLRMATINGAKSVL 386 (466)
Q Consensus 372 ~al~~~T~~~A~~lg 386 (466)
++.+.++.|++++||
T Consensus 237 ~~~~~~~~N~~~ll~ 251 (251)
T cd01310 237 EVAEVTTENAKRLFG 251 (251)
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999999986
No 125
>PLN02599 dihydroorotase
Probab=98.70 E-value=9.6e-07 Score=83.27 Aligned_cols=156 Identities=13% Similarity=0.108 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchH-HHH--hhhccCCCCeeEEEeecCChhhHHHHHh--c
Q 012333 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFL--DKIEFLQNNLLSAHTVWVNHTEIGLLSR--A 296 (466)
Q Consensus 222 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~H~~~~~~~~~~~~~~--~ 296 (466)
.+.+.++++.+++.|.++.+|+............ ....+ ..+ ......+.+.++.|... .+.++.+++ .
T Consensus 135 ~~~l~~~le~~~e~G~~L~vH~E~~~~~~~~~~~----E~~~i~r~l~~~la~~~g~kI~i~HiSt--~~~ve~v~~ak~ 208 (364)
T PLN02599 135 LGKCLPVLEEMAEQGMPLLVHGEVTDPSVDIFDR----EKVFIDTILAPLVQKLPQLKIVMEHITT--MDAVEFVESCGD 208 (364)
T ss_pred HHHHHHHHHHHHhcCCEEEEecCCCccccccccc----HHHHHHHHHHHHHHhccCCeEEEEecCh--HHHHHHHHhccC
Confidence 4788899999999999999999874321110000 00001 122 12234455566666543 344444433 2
Q ss_pred -CCeEEECccchhhc----------------------cCCccHHHHHHcCCc-EEEccCCCCCCCCC--------CHHHH
Q 012333 297 -GVKVSHCPASAMRM----------------------LGFAPIKEMLHADIC-VSLGTDGAPSNNRM--------SIVDE 344 (466)
Q Consensus 297 -g~~~~~~p~~~~~~----------------------~~~~~~~~~~~~gi~-~~~gsD~~~~~~~~--------~~~~~ 344 (466)
.+...+||+.-..- .....+++.+..|.. .++||||.|+.... ..+..
T Consensus 209 ~~vtae~tpHhL~l~~~~~~~~~~~~~~k~~PPlR~~~dr~aL~~al~~G~i~~~i~SDHaPh~~~~K~~~~g~~Gi~~~ 288 (364)
T PLN02599 209 GNVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREALVKAATSGSKKFFLGTDSAPHPKRAKEASCGCAGIYSA 288 (364)
T ss_pred CCEEEEecHHHHhcCHHHHhccCCCCCeEEECCCCCHHHHHHHHHHHHcCCCCEEEecCCCCCChHHhcCCCCCCCcccH
Confidence 46777888744210 011245567788985 89999999864210 11110
Q ss_pred -HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccc
Q 012333 345 -MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393 (466)
Q Consensus 345 -~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~ 393 (466)
.....+... ....+ +++++++.+|.|||+++||..++|+
T Consensus 289 ~~~l~~l~~~---------~~~~g-~l~~l~~~~S~npA~~~gL~~~kg~ 328 (364)
T PLN02599 289 PVALSLYAKA---------FEEAG-ALDKLEAFTSFNGPDFYGLPRNTST 328 (364)
T ss_pred HHHHHHHHHH---------HHhcC-CHHHHHHHHhHHHHHHhCCCCCCCe
Confidence 000000000 01113 8899999999999999999445665
No 126
>PRK09875 putative hydrolase; Provisional
Probab=98.70 E-value=7.8e-06 Score=74.51 Aligned_cols=239 Identities=13% Similarity=0.065 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHhcCceeeeecC----ccCHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHH
Q 012333 124 YISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199 (466)
Q Consensus 124 ~~~~~~~~~~~~~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (466)
+......+..+.+.|+.|++|+. +.+...+.+..++.|+++..+..++... ..|........++..+...+.+.+
T Consensus 33 ~~~~~~el~~~~~~Gg~tiVd~T~~g~GRd~~~l~~is~~tgv~Iv~~TG~y~~~-~~p~~~~~~~~e~la~~~i~ei~~ 111 (292)
T PRK09875 33 YAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDA-FFPEHVATRSVQELAQEMVDEIEQ 111 (292)
T ss_pred HHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHhCCcEEEcCcCCCCc-cCCHHHhcCCHHHHHHHHHHHHHH
Confidence 44555566778889999999964 3567778888999999998888877543 244444444444444444444444
Q ss_pred hccC---CCCCeEEEEeecc--cccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCC
Q 012333 200 HHHA---ADGRIRIWFGIRQ--IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ 274 (466)
Q Consensus 200 ~~~~---~~~~i~~~~~~~~--~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (466)
..+. ..+.++- ++... ......+.++.+...+++.|.++.+|...... +....+.+...+.-.
T Consensus 112 Gi~gt~ikaGvIGe-iG~~~~~it~~E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~-----------g~e~l~il~e~Gvd~ 179 (292)
T PRK09875 112 GIDGTELKAGIIAE-IGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTM-----------GLEQLALLQAHGVDL 179 (292)
T ss_pred hhccCCCcccEEEE-EecCCCCCCHHHHHHHHHHHHHHHHHCCcEEEcCCCccc-----------hHHHHHHHHHcCcCc
Confidence 3321 1122211 11111 12222345667777888999999999644211 111344555555555
Q ss_pred CCeeEEEeecC-ChhhHHHHHhcCCeEEECccchh--hc--cCCccHHHHHHcC--CcEEEccCCCCCCC-----CCCHH
Q 012333 275 NNLLSAHTVWV-NHTEIGLLSRAGVKVSHCPASAM--RM--LGFAPIKEMLHAD--ICVSLGTDGAPSNN-----RMSIV 342 (466)
Q Consensus 275 ~~~~~~H~~~~-~~~~~~~~~~~g~~~~~~p~~~~--~~--~~~~~~~~~~~~g--i~~~~gsD~~~~~~-----~~~~~ 342 (466)
.+.++.|.... +.+.+..+++.|+.+.++-.... .. .....+..+.+.| -++.+++|...... ...+.
T Consensus 180 ~rvvi~H~d~~~d~~~~~~l~~~G~~l~fD~~g~~~~~pd~~r~~~i~~L~~~Gy~drilLS~D~~~~~~~~~~gg~G~~ 259 (292)
T PRK09875 180 SRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYD 259 (292)
T ss_pred ceEEEeCCCCCCCHHHHHHHHHcCCEEEeccCCCcccCCHHHHHHHHHHHHhcCCCCeEEEeCCCCCcccccccCCCChh
Confidence 68899998543 55778889999999887521110 00 1234566778887 46888999753311 00011
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 343 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
.-+... +.+ ..+.|++.+++=+++..||+++|+
T Consensus 260 ~i~~~~--ip~---------L~~~Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 260 YLLTTF--IPQ---------LRQSGFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred HHHHHH--HHH---------HHHcCCCHHHHHHHHHHCHHHHhC
Confidence 111111 111 012369999999999999999874
No 127
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=98.68 E-value=1.6e-06 Score=79.79 Aligned_cols=139 Identities=19% Similarity=0.261 Sum_probs=95.0
Q ss_pred cCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecC--ChhhHHHHHhc
Q 012333 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRA 296 (466)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~~ 296 (466)
...++....+.+.++++|+.+.+|+.+...... ..+.+...+ . ..|.||..+ .++.++++++.
T Consensus 181 ~~p~~~f~~~f~~~r~~gl~lt~HaGE~~~~~~-----------i~~al~~~~---~-~rI~HGi~~~~d~~L~~~l~~~ 245 (345)
T COG1816 181 GYPPELFVSLFKLARDNGLKLTIHAGEAGGPES-----------IRDALDLLG---A-ERIGHGIRAIEDPELLYRLAER 245 (345)
T ss_pred cCCHHHHHHHHHHHHHcCceEEEeccccCCcHH-----------HHHHHHHhc---h-hhhccccccccCHHHHHHHHHh
Confidence 345677889999999999999999987543222 112222222 1 137898875 35778999999
Q ss_pred CCeEEECccchhhcc-----CCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 012333 297 GVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAE 371 (466)
Q Consensus 297 g~~~~~~p~~~~~~~-----~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~ 371 (466)
++.+.+||.++.... ...|++++++.|++++++||.+..... .+..+...+.... +++..
T Consensus 246 qI~levCP~SNi~~~~v~~~~~hPf~~~~d~Gv~VsLnTDdp~~f~~-~l~~Ey~~aa~~~--------------~l~~~ 310 (345)
T COG1816 246 QIPLEVCPLSNIQLGVVPSLAKHPFKKLFDAGVKVSLNTDDPLYFGT-PLIEEYLVAAQIY--------------GLSRE 310 (345)
T ss_pred CCeeEECCcchhhcccccchhhCcHHHHHHcCCceEEcCCChhhcCC-chHHHHHHHHHHh--------------CCCHH
Confidence 999999999996552 235899999999999999999876432 4555554442221 37777
Q ss_pred HHHHHHhHHHHHHcCCC
Q 012333 372 TVLRMATINGAKSVLWD 388 (466)
Q Consensus 372 ~al~~~T~~~A~~lgl~ 388 (466)
++-+. +.|+=+..+++
T Consensus 311 dl~~~-arnav~~af~~ 326 (345)
T COG1816 311 DLCEL-ARNAVEAAFIS 326 (345)
T ss_pred HHHHH-HHHHHHHccCC
Confidence 76643 44555555543
No 128
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=98.63 E-value=1.7e-06 Score=81.88 Aligned_cols=134 Identities=22% Similarity=0.258 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC--hhhHHHHHhcCCeEE
Q 012333 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVS 301 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~g~~~~ 301 (466)
....+++.+++.|+++.+|+.|..... ...+.+..++. ..|.||..+. ++.++.+++.++.+.
T Consensus 181 ~~~~~~~~a~~~gl~~t~HaGE~~~~~--------------~~~~ai~~l~~-~RIgHG~~~~~~p~l~~~~~~~~I~iE 245 (331)
T PF00962_consen 181 KFAPAFRKAREAGLKLTVHAGETGGPE--------------HIRDAILLLGA-DRIGHGVRLIKDPELLELLAERQIPIE 245 (331)
T ss_dssp GHHHHHHHHHHTT-EEEEEESSSSTHH--------------HHHHHHHTST--SEEEE-GGGGGSHHHHHHHHHTT-EEE
T ss_pred HHHHHHhhhcccceeecceecccCCcc--------------cccchhhhccc-eeecchhhhhhhhHHHHHHHHhCCCee
Confidence 377888889999999999998865322 22222222332 3599999875 566899999999999
Q ss_pred ECccchhhcc-----CCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 012333 302 HCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (466)
Q Consensus 302 ~~p~~~~~~~-----~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 376 (466)
+||.+|.... ...|++.+++.|++++++||.+... ..++..+...+.... ++|.++..+
T Consensus 246 vcptSN~~~~~~~~~~~hP~~~~~~~gv~v~i~TDd~~~~-~~~l~~ey~~~~~~~--------------~l~~~~l~~- 309 (331)
T PF00962_consen 246 VCPTSNVQLGAVPSYEEHPLRKLLDAGVPVSINTDDPGVF-GTTLSDEYYLAAEAF--------------GLSLADLKQ- 309 (331)
T ss_dssp E-HHHHHHTTSSSTGGG-CHHHHHHTT-EEEE--BSHHHH-T-SHHHHHHHHHHHH--------------T--HHHHHH-
T ss_pred eCCCcCcccceeeecchhHHHHHHHcCCceeccCCCcccc-CCCcHHHHHHHHHHc--------------CCCHHHHHH-
Confidence 9999998662 2469999999999999999987432 124566655443221 388888654
Q ss_pred HhHHHHHHcCCC
Q 012333 377 ATINGAKSVLWD 388 (466)
Q Consensus 377 ~T~~~A~~lgl~ 388 (466)
+..|+.+...++
T Consensus 310 l~~nsi~~sf~~ 321 (331)
T PF00962_consen 310 LARNSIEASFLS 321 (331)
T ss_dssp HHHHHHHCSSS-
T ss_pred HHHHHHHHHcCC
Confidence 455777766654
No 129
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=98.38 E-value=3.4e-05 Score=69.64 Aligned_cols=137 Identities=11% Similarity=0.060 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEE
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~ 302 (466)
+.+++.+++|+++++++.+|+-..... ..+.+...+. ....+.|+..-+.++++.+.+.|..+.+
T Consensus 114 ~vf~~ql~lA~~~~~Pv~iH~r~a~~~-------------~~~il~~~~~--~~~~i~H~fsG~~~~a~~~l~~G~~iS~ 178 (258)
T PRK11449 114 WLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDL--PRTGVVHGFSGSLQQAERFVQLGYKIGV 178 (258)
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccHH-------------HHHHHHhcCC--CCCeEEEcCCCCHHHHHHHHHCCCEEEe
Confidence 457888999999999999999763322 2333333321 1245899998899999999999999887
Q ss_pred CccchhhccCCccHHHHHHc-C-CcEEEccCCCCCCCC------CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 012333 303 CPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNR------MSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (466)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 374 (466)
.+..... ....++++++. . -.+.+.||+|...+. -.+.........+... .+++.+++.
T Consensus 179 ~g~it~~--~~~~~~~~~~~ipldriL~ETD~P~l~p~~~~~~~n~p~~~~~~~~~ia~l-----------~~~~~~el~ 245 (258)
T PRK11449 179 GGTITYP--RASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFDVLCEL-----------RPEPADEIA 245 (258)
T ss_pred Ccccccc--CcHHHHHHHHhCChhhEEEecCCCCCCCCCCCCCCCCChHHHHHHHHHHHH-----------HCcCHHHHH
Confidence 7654321 11224444433 1 147889999732110 0011111111111111 148899999
Q ss_pred HHHhHHHHHHcCC
Q 012333 375 RMATINGAKSVLW 387 (466)
Q Consensus 375 ~~~T~~~A~~lgl 387 (466)
+..+.|..+++|+
T Consensus 246 ~~~~~N~~~lf~~ 258 (258)
T PRK11449 246 EVLLNNTYTLFNV 258 (258)
T ss_pred HHHHHHHHHHhCc
Confidence 9999999998874
No 130
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=98.37 E-value=2e-05 Score=70.11 Aligned_cols=137 Identities=15% Similarity=0.089 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEE
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~ 302 (466)
+.+++-+++|+++++|+.+|+-+.... ..+++..... ....+.||..-+.+.++.+.+.|..+.+
T Consensus 112 ~~F~~ql~lA~~~~lPviIH~R~A~~d-------------~~~iL~~~~~--~~~gi~HcFsGs~e~a~~~~d~G~yisi 176 (256)
T COG0084 112 EVFEAQLELAKELNLPVIIHTRDAHED-------------TLEILKEEGA--PVGGVLHCFSGSAEEARKLLDLGFYISI 176 (256)
T ss_pred HHHHHHHHHHHHcCCCEEEEccccHHH-------------HHHHHHhcCC--CCCEEEEccCCCHHHHHHHHHcCeEEEE
Confidence 456788999999999999999764322 2333333332 3456899999999999999999988887
Q ss_pred CccchhhccCCccHHHHHHc-C-CcEEEccCCCCCCC------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 012333 303 CPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (466)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 374 (466)
.+...... ...++++.+. . -.+.+=||+|-..+ .-.+.........+...+ +++++++.
T Consensus 177 sG~itfk~--a~~~~ev~~~iPldrLL~ETDsPyl~P~p~rGkrNeP~~v~~v~~~iAelk-----------~~~~eeva 243 (256)
T COG0084 177 SGIVTFKN--AEKLREVARELPLDRLLLETDAPYLAPVPYRGKRNEPAYVRHVAEKLAELK-----------GISAEEVA 243 (256)
T ss_pred CceeecCC--cHHHHHHHHhCCHhHeEeccCCCCCCCcCCCCCCCCchHHHHHHHHHHHHh-----------CCCHHHHH
Confidence 76554432 1122333222 1 13556799873211 111222222222222211 59999999
Q ss_pred HHHhHHHHHHcCC
Q 012333 375 RMATINGAKSVLW 387 (466)
Q Consensus 375 ~~~T~~~A~~lgl 387 (466)
+..|.|.-+++++
T Consensus 244 ~~t~~N~~~lf~~ 256 (256)
T COG0084 244 EITTENAKRLFGL 256 (256)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999988874
No 131
>PRK10812 putative DNAse; Provisional
Probab=98.37 E-value=4e-05 Score=69.36 Aligned_cols=139 Identities=13% Similarity=0.060 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEE
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~ 302 (466)
+.++..+++|+++++++.+|+-....+ ..+.+...+.. ....+.|+..-+.+.++.+.+.|..+.+
T Consensus 111 ~vf~~ql~lA~e~~~Pv~iH~r~a~~~-------------~l~iL~~~~~~-~~~~v~H~fsG~~~~a~~~~~~G~~is~ 176 (265)
T PRK10812 111 ESFRHHIQIGRELNKPVIVHTRDARAD-------------TLAILREEKVT-DCGGVLHCFTEDRETAGKLLDLGFYISF 176 (265)
T ss_pred HHHHHHHHHHHHhCCCeEEEeeCchHH-------------HHHHHHhhcCC-CCCEEEEeecCCHHHHHHHHHCCCEEEE
Confidence 456788999999999999998653321 23334332221 1134689998788999999999999887
Q ss_pred CccchhhccCCccHHHHHHcC--CcEEEccCCCCCCC------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 012333 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (466)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~g--i~~~~gsD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 374 (466)
.....+ .....++.+++.. -.+.+.||+|-..+ .-.+..-...+..+.+. .+++.+++.
T Consensus 177 ~g~~t~--~~~~~~~~~~~~ipldrlLlETD~P~~~p~~~~g~~n~P~~i~~v~~~ia~l-----------~g~~~eei~ 243 (265)
T PRK10812 177 SGIVTF--RNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVL-----------KGVSVEELA 243 (265)
T ss_pred Ceeeec--CccHHHHHHHHhCChhhEEEecCCCCCCCcCCCCCCCCcHHHHHHHHHHHHH-----------hCCCHHHHH
Confidence 743221 1223456666654 36888999863211 00111111111122111 159999999
Q ss_pred HHHhHHHHHHcCCC
Q 012333 375 RMATINGAKSVLWD 388 (466)
Q Consensus 375 ~~~T~~~A~~lgl~ 388 (466)
+..+.|+.+++++.
T Consensus 244 ~~~~~N~~~lf~~~ 257 (265)
T PRK10812 244 QVTTDNFARLFHID 257 (265)
T ss_pred HHHHHHHHHHHCCC
Confidence 99999999999984
No 132
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=98.27 E-value=2.9e-05 Score=71.39 Aligned_cols=238 Identities=11% Similarity=0.044 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHhcCceeeeecC----ccCHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHH
Q 012333 123 SYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 198 (466)
Q Consensus 123 ~~~~~~~~~~~~~~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (466)
........++.+...|+.|++|+. +.+...+.+..+..|+++..+..++... ..+........++..+...+-+.
T Consensus 36 ~~~~~~~El~~~k~~Gg~tiVd~T~~g~GRd~~~l~~is~~tGv~II~~TG~y~~~-~~p~~~~~~s~e~la~~~i~Ei~ 114 (308)
T PF02126_consen 36 DVEAAVAELKEFKAAGGRTIVDATPIGLGRDVEALREISRRTGVNIIASTGFYKEP-FYPEWVREASVEELADLFIREIE 114 (308)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEE--SGGGTB-HHHHHHHHHHHT-EEEEEEEE-SGG-CSCHHHHTSHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCEEEecCCcccCcCHHHHHHHHHHhCCeEEEeCCCCccc-cCChhhhcCCHHHHHHHHHHHHH
Confidence 345555677778899999999964 3567788889999999998888777533 23332233333332222222222
Q ss_pred Hhcc---CCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCC
Q 012333 199 KHHH---AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 275 (466)
Q Consensus 199 ~~~~---~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (466)
.-.+ ...+.++........-......++.+....++.|+++++|+........ ...+++.+.+.--.
T Consensus 115 ~GidgT~ikaG~Ik~~~~~~~it~~E~k~lrAaa~A~~~TG~pI~~H~~~g~~~~~----------e~~~il~e~Gv~~~ 184 (308)
T PF02126_consen 115 EGIDGTGIKAGIIKEIGSSNPITPLEEKVLRAAARAHKETGAPISTHTGRGTRMGL----------EQLDILEEEGVDPS 184 (308)
T ss_dssp T-STTSSB-ESEEEEEEBTTBCEHHHHHHHHHHHHHHHHHT-EEEEEESTTGTCHH----------HHHHHHHHTT--GG
T ss_pred hcCCCCccchhheeEeeccCCCCHHHHHHHHHHHHHHHHhCCeEEEcCCCCCcCHH----------HHHHHHHHcCCChh
Confidence 2111 1123444432222222222345667777778889999999965431111 13456666666667
Q ss_pred CeeEEEeecCCh-hhHHHHHhcCCeEEECcc------ch------hhc--cCCccHHHHHHcCC--cEEEccCCCCC--C
Q 012333 276 NLLSAHTVWVNH-TEIGLLSRAGVKVSHCPA------SA------MRM--LGFAPIKEMLHADI--CVSLGTDGAPS--N 336 (466)
Q Consensus 276 ~~~~~H~~~~~~-~~~~~~~~~g~~~~~~p~------~~------~~~--~~~~~~~~~~~~gi--~~~~gsD~~~~--~ 336 (466)
+.++.|.-...+ +.+..+++.|+.+.+.-. .. +.. .....+..++++|- ++.+|.|.... .
T Consensus 185 rvvigH~D~~~D~~y~~~la~~G~~l~~D~~g~~~~g~~~~~~~~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~k~~~ 264 (308)
T PF02126_consen 185 RVVIGHMDRNPDLDYHRELADRGVYLEFDTIGREFSGKDKNPRVGYPPDEERIELLKELIEEGYADQILLSHDIGRKSRL 264 (308)
T ss_dssp GEEETSGGGST-HHHHHHHHHTT-EEEETTTT-B-TTTTTCHSCTTS-HHHHHHHHHHHHHTTTGGGEEE-HHHESEEGS
T ss_pred HeEEeCCCCCCCHHHHHHHHhcCCEEEecCCcccccCcccCccCCCCCHHHHHHHHHHHHHcCCcCcEEEeccccccccc
Confidence 889999875433 456788889998876322 00 000 12235677888885 68899886431 0
Q ss_pred C-------CCCHH-HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 012333 337 N-------RMSIV-DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (466)
Q Consensus 337 ~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 385 (466)
. .+..+ ..+.. .+. +.|+|.++.=+++..||+++|
T Consensus 265 ~~~gg~g~~~~~i~~~fiP-~L~-------------~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 265 YRYGGGGYGYIYILTRFIP-RLK-------------ERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp SSCCHHHHTTTHHHHTHHH-HHH-------------HTTS-HHHHHHHHTHHHHHHH
T ss_pred cccCCCCccHHHHHHHHHH-HHH-------------HcCCCHHHHHHHHHHCHHHHc
Confidence 0 11111 11111 111 136999999999999999987
No 133
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=98.24 E-value=0.00013 Score=61.43 Aligned_cols=148 Identities=12% Similarity=0.109 Sum_probs=89.3
Q ss_pred EeecccccCCH---HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChh
Q 012333 212 FGIRQIMNATD---RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT 288 (466)
Q Consensus 212 ~~~~~~~~~~~---~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 288 (466)
++--+....++ +.+++.+++|+++++++.+|.-........ ....+.+...++-....++.|+ +.+
T Consensus 100 iGEiGLe~~t~~E~evf~~QL~LA~e~dvPviVHTPr~nK~e~t--------~~ildi~~~~~l~~~lvvIDH~---N~e 168 (254)
T COG1099 100 IGEIGLEEATDEEKEVFREQLELARELDVPVIVHTPRRNKKEAT--------SKILDILIESGLKPSLVVIDHV---NEE 168 (254)
T ss_pred eeecccccCCHHHHHHHHHHHHHHHHcCCcEEEeCCCCcchhHH--------HHHHHHHHHcCCChhheehhcc---cHH
Confidence 33344444554 446788899999999999998543322111 1134455555555555667776 567
Q ss_pred hHHHHHhcCCe--EEECccchhhccCCccHHHHHHcC-CcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCC
Q 012333 289 EIGLLSRAGVK--VSHCPASAMRMLGFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDP 365 (466)
Q Consensus 289 ~~~~~~~~g~~--~~~~p~~~~~~~~~~~~~~~~~~g-i~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (466)
.++...+.+.. .+++|.. +.....+.-..+.| -++.+.||..... .+++.--+.+..+..
T Consensus 169 tv~~vld~e~~vGlTvqPgK---lt~~eAveIV~ey~~~r~ilnSD~~s~~--sd~lavprtal~m~~------------ 231 (254)
T COG1099 169 TVDEVLDEEFYVGLTVQPGK---LTVEEAVEIVREYGAERIILNSDAGSAA--SDPLAVPRTALEMEE------------ 231 (254)
T ss_pred HHHHHHhccceEEEEecCCc---CCHHHHHHHHHHhCcceEEEeccccccc--ccchhhhHHHHHHHH------------
Confidence 78877777655 4566622 12222333444556 5788899976432 244444444433322
Q ss_pred CCCCHHHHHHHHhHHHHHHcCC
Q 012333 366 AALPAETVLRMATINGAKSVLW 387 (466)
Q Consensus 366 ~~ls~~~al~~~T~~~A~~lgl 387 (466)
.|++.++.-+.+-.|+-+++|+
T Consensus 232 ~gv~~~~i~kV~~~NA~~~~~l 253 (254)
T COG1099 232 RGVGEEEIEKVVRENALSFYGL 253 (254)
T ss_pred hcCCHHHHHHHHHHHHHHHhCc
Confidence 2588888888888888888876
No 134
>PRK10425 DNase TatD; Provisional
Probab=98.23 E-value=0.00017 Score=65.03 Aligned_cols=139 Identities=13% Similarity=-0.020 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEE
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~ 302 (466)
+.+++.+++|++++.|+.+|+-+.... ..+++.... ......+.|+..-+.+.++.+.+.|..+.+
T Consensus 108 ~vF~~ql~lA~~~~~Pv~iH~r~a~~~-------------~l~iL~~~~-~~~~~~i~H~fsG~~~~~~~~l~~G~~~si 173 (258)
T PRK10425 108 RAFVAQLAIAAELNMPVFMHCRDAHER-------------FMALLEPWL-DKLPGAVLHCFTGTREEMQACLARGLYIGI 173 (258)
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCchHH-------------HHHHHHHhc-cCCCCeEEEecCCCHHHHHHHHHCCCEEEE
Confidence 457788999999999999999753321 233333321 111135779999899999999999999887
Q ss_pred CccchhhccCCccHHHHHHc-C-CcEEEccCCCCCCC----------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 012333 303 CPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN----------RMSIVDEMYLASLINKGREVFANGTTDPAALPA 370 (466)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 370 (466)
.+..... .....++++++. . -.+.+-||+|-..+ .-.+..-......+... .+++.
T Consensus 174 ~g~i~~~-~~~~~~~~~~~~ipldrlLlETDaP~l~P~~~~~~~~~~~n~P~~i~~v~~~iA~l-----------~~~~~ 241 (258)
T PRK10425 174 TGWVCDE-RRGLELRELLPLIPAERLLLETDAPYLLPRDLTPKPASRRNEPAFLPHILQRIAHW-----------RGEDA 241 (258)
T ss_pred Cceeecc-cccHHHHHHHHhCChHHEEEeccCCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHH-----------HCcCH
Confidence 7643211 111123343332 1 14677899863211 01122222222222221 14999
Q ss_pred HHHHHHHhHHHHHHcCC
Q 012333 371 ETVLRMATINGAKSVLW 387 (466)
Q Consensus 371 ~~al~~~T~~~A~~lgl 387 (466)
+++.+..+.|.-+++|+
T Consensus 242 ~~v~~~~~~N~~~lf~~ 258 (258)
T PRK10425 242 AWLAATTDANARTLFGL 258 (258)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 99999999999888874
No 135
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=98.21 E-value=0.00011 Score=71.91 Aligned_cols=146 Identities=13% Similarity=0.138 Sum_probs=93.4
Q ss_pred CCHHHHHHHHH-HHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC--hhhHHHHHhc
Q 012333 220 ATDRLLLETRD-MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRA 296 (466)
Q Consensus 220 ~~~~~l~~~~~-~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~ 296 (466)
.+...+...+. .++..++++.+|+.|...... .....+.+.+ .++. ..|.||..+. ++.++.++++
T Consensus 303 ~pl~~f~~~~~~~~~~~gl~~t~HAGE~~~~g~---------~~d~nl~dAI-lLg~-~RIGHG~~l~~~P~l~~~vke~ 371 (479)
T TIGR01431 303 RSLLDFIDALLGPSDKEKLPYFFHAGETNWQGT---------TVDENLIDAL-LLNT-TRIGHGFALVKHPLVLQMLKER 371 (479)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEecCCcCCCCC---------CchhHHHHHH-HcCC-ccccCcccccCCHHHHHHHHHh
Confidence 34445444444 555689999999988642110 0112233344 2322 3489999986 7889999999
Q ss_pred CCeEEECccchhhc-----cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 012333 297 GVKVSHCPASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAE 371 (466)
Q Consensus 297 g~~~~~~p~~~~~~-----~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~ 371 (466)
++.+.+||.+|... ....|++.++++|++++++||.+.....-.+..+.+.+...-. ...+++
T Consensus 372 ~I~lEvCP~SN~~l~~v~~~~~HPl~~lla~Gvpv~InSDDP~~~~~t~Ls~ef~~a~~~~~-----------~~~~~l- 439 (479)
T TIGR01431 372 NIAVEVNPISNQVLQLVADLRNHPCAYLFADNYPMVISSDDPAFWGATPLSHDFYIAFMGLA-----------SAKADL- 439 (479)
T ss_pred CCeEEECccchhhhcccCCcccChHHHHHHCCCcEEEeCCCccccCCCCchHHHHHHHHHhc-----------ccCCCH-
Confidence 99999999999765 2346899999999999999999865322234555544432110 001455
Q ss_pred HHHHHHhHHHHHHcCCC
Q 012333 372 TVLRMATINGAKSVLWD 388 (466)
Q Consensus 372 ~al~~~T~~~A~~lgl~ 388 (466)
+-++.+..|+.+.-.++
T Consensus 440 ~~L~~la~NSi~~Sfl~ 456 (479)
T TIGR01431 440 RTLKQLALNSIKYSALS 456 (479)
T ss_pred HHHHHHHHHHHHHHCCC
Confidence 44556667777776664
No 136
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]
Probab=98.17 E-value=0.00024 Score=65.87 Aligned_cols=141 Identities=22% Similarity=0.273 Sum_probs=92.0
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhh--HHHHHhcCC
Q 012333 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE--IGLLSRAGV 298 (466)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~--~~~~~~~g~ 298 (466)
+.....+.+..+.+.|+++.+|+.+....... ..++++.++ ...|.||..+..+. +.++++.++
T Consensus 225 p~~~f~~vl~~~~~~gi~~t~HaGE~~~~~~~----------v~~~LD~l~----~~RIGHG~~l~~dp~L~~~~k~~nI 290 (399)
T KOG1097|consen 225 PLSLFLEVLAKAPAKGIHLTFHAGETNGGASV----------VKNALDLLG----TERIGHGYFLTKDPELINLLKSRNI 290 (399)
T ss_pred ChhhhHHHHHhhhhcCCcEEEEccccCCChHH----------HHHHHHhhC----CccccCceeccCCHHHHHHHHhcCc
Confidence 34455566666666899999999886411111 122333121 23489999998766 999999999
Q ss_pred eEEECccchhhc-----cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 012333 299 KVSHCPASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373 (466)
Q Consensus 299 ~~~~~p~~~~~~-----~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~a 373 (466)
.+.+||.++... -...|++++++.|+++.|+||-+....+..+....+.+..-. .+ ++++++.
T Consensus 291 ~lEiCP~SN~vl~~v~d~rnhp~~~~~~~~vP~vI~sDDP~~f~~~~Lt~dfy~A~~~~-----------~~-~~~~~~l 358 (399)
T KOG1097|consen 291 ALEICPISNQVLGLVSDLRNHPVARLLAAGVPVVINSDDPGFFGAAPLTLDFYLAFLGI-----------AP-NLDLREL 358 (399)
T ss_pred eEEEccchhhheeccccccccHHHHHHhCCCCEEEeCCCcccccCccccHHHHHHHHhc-----------cc-cCCHHHH
Confidence 999999999755 234689999999999999999986543322333333332211 01 3777776
Q ss_pred HHHHhHHHHHHcCCC
Q 012333 374 LRMATINGAKSVLWD 388 (466)
Q Consensus 374 l~~~T~~~A~~lgl~ 388 (466)
.++ ..|+.+...+.
T Consensus 359 ~~l-a~nai~~S~l~ 372 (399)
T KOG1097|consen 359 KRL-ALNAIKYSFLS 372 (399)
T ss_pred HHH-HHHHhhhccCC
Confidence 654 45766666553
No 137
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=98.05 E-value=0.0014 Score=58.49 Aligned_cols=249 Identities=15% Similarity=0.084 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHhcCceeeeecC----ccCHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHH
Q 012333 122 DSYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197 (466)
Q Consensus 122 ~~~~~~~~~~~~~~~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (466)
+.+...........+.|+-||+|+- +.....+.+..++.|+++..+.+++.... .+........+..-+....-+
T Consensus 45 ~~~a~~~~e~~~~~a~Gg~TIVD~T~~~~GRdv~~m~~vs~atglnIV~~TGfy~~~~-~p~~~~~~~i~~~ae~~v~ei 123 (316)
T COG1735 45 DEVALAIAELKRLMARGGQTIVDATNIGIGRDVLKMRRVAEATGLNIVAATGFYKAAF-HPEYFALRPIEELAEFVVKEI 123 (316)
T ss_pred HHHHHHHHHHHHHHHcCCCeEeeCCccccCcCHHHHHHHHHHhCCcEEEecccccccc-chhHHhhCCHHHHHHHHHHHH
Confidence 4445556677788899999999964 35677888899999999988877765442 232222222222222222222
Q ss_pred HHhccC---CCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCC
Q 012333 198 AKHHHA---ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ 274 (466)
Q Consensus 198 ~~~~~~---~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (466)
++-... ..+.++...+...+-...++.++.+.+..++.|.|+++|..... . +....+++.+.+.--
T Consensus 124 ~~Gi~gT~ikAGiIk~~~~~~~iTp~Eek~lrAaA~A~~~Tg~Pi~tHt~~gt-~----------g~eq~~il~~egvdl 192 (316)
T COG1735 124 EEGIAGTGIKAGIIKEAGGSPAITPLEEKSLRAAARAHKETGAPISTHTPAGT-M----------GLEQLRILAEEGVDL 192 (316)
T ss_pred HhcccCCccccceeeeccCcccCCHHHHHHHHHHHHHhhhcCCCeEEeccchh-h----------hHHHHHHHHHcCCCh
Confidence 221111 12444443333333223344566677777888999999986543 1 112445666666555
Q ss_pred CCeeEEEee-cCChhh-HHHHHhcCCeEEECccchhh--c--cCCccHHHHHHcCC--cEEEccCCCCCCCCCCHHHHHH
Q 012333 275 NNLLSAHTV-WVNHTE-IGLLSRAGVKVSHCPASAMR--M--LGFAPIKEMLHADI--CVSLGTDGAPSNNRMSIVDEMY 346 (466)
Q Consensus 275 ~~~~~~H~~-~~~~~~-~~~~~~~g~~~~~~p~~~~~--~--~~~~~~~~~~~~gi--~~~~gsD~~~~~~~~~~~~~~~ 346 (466)
.+..+.|+- ...+.. .+.++.+|+.+...-..... . ....++.++.+.|. .+.+|-|..... .+.+..
T Consensus 193 ~~v~igH~d~n~dd~~y~~~l~~~Ga~l~fD~iG~d~y~pd~~r~~~~~~l~~~gy~d~i~ls~d~~~~~--~~~~~~-- 268 (316)
T COG1735 193 RKVSIGHMDPNTDDVYYQKKLADRGAFLEFDRIGKDKYYPDEDRIAPLLELVARGYADLILLSHDDICLS--DDVFLK-- 268 (316)
T ss_pred hHeeEeccCCCCChHHHHHHHHhcCceEEecccCccccCcHHHhhhhHHHHHHhhHhhheecccchhhhh--hhHHHH--
Confidence 678899987 333433 45577778876544221110 0 23456778888886 356652322110 011111
Q ss_pred HHHHHhcccccc--cC----CCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 012333 347 LASLINKGREVF--AN----GTTDPAALPAETVLRMATINGAKSVLW 387 (466)
Q Consensus 347 ~~~~~~~~~~~~--~~----~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (466)
..........+ .. ....+.|++-+..=.++-.||+++|..
T Consensus 269 -~~~~~~~~~g~~~I~~~fIP~Lk~~Gvde~~i~~mlvdNP~r~f~~ 314 (316)
T COG1735 269 -SMLKANGGWGYGYILNDFIPRLKRHGVDEETIDTMLVDNPARLFTA 314 (316)
T ss_pred -hhhhhcCCcccchhhHhhHHHHHHcCCCHHHHHHHHhhCHHHHhcc
Confidence 00000011110 00 012346799666667777899999864
No 138
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=98.01 E-value=0.0002 Score=64.84 Aligned_cols=219 Identities=12% Similarity=0.077 Sum_probs=113.4
Q ss_pred HHHHhcCceeeeecCccC--HHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeE
Q 012333 132 IELIHSGVTCFAEAGGQH--VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 209 (466)
Q Consensus 132 ~~~~~~GvTtv~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 209 (466)
..+...|++.++.++... .....+.....+.++..+. |+-|.+.........+...++ .......-..++
T Consensus 21 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~-------GiHP~~~~~~~~~~~~~l~~l-~~~~~~~~~aIG 92 (255)
T PF01026_consen 21 ERAREAGVSAIIIVSTDPEDWERVLELASQYPDRVYPAL-------GIHPWEAHEVNEEDLEELEEL-INLNRPKVVAIG 92 (255)
T ss_dssp HHHHHTTEEEEEEEESSHHHHHHHHHHHHHTTTEEEEEE----------GGGGGGHSHHHHHHHHHH-HHHTSTTEEEEE
T ss_pred HHHHHcCCCEEEEcCCCHHHhHHHHHHHhcCCCeEEEEe-------cCCcchhhhhhHHHHHHHHHH-HHhccccceeee
Confidence 457789999987765332 2333444445555454333 333333222223333333333 222221111111
Q ss_pred EEEeeccccc------CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEee
Q 012333 210 IWFGIRQIMN------ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV 283 (466)
Q Consensus 210 ~~~~~~~~~~------~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 283 (466)
- +++...+. .-.+.+++.+++|+++++++.+|+-.... ...+.+...+.. ...++.|+.
T Consensus 93 E-iGLD~~~~~~~~~~~Q~~vF~~ql~lA~~~~~pv~iH~r~a~~-------------~~l~il~~~~~~-~~~~i~H~f 157 (255)
T PF01026_consen 93 E-IGLDYYWRNEEDKEVQEEVFERQLELAKELNLPVSIHCRKAHE-------------ELLEILKEYGPP-NLRVIFHCF 157 (255)
T ss_dssp E-EEEETTTTSSSGHHHHHHHHHHHHHHHHHHTCEEEEEEESHHH-------------HHHHHHHHTTGG-TSEEEETT-
T ss_pred e-eccCcccccCCcHHHHHHHHHHHHHHHHHhCCcEEEecCCcHH-------------HHHHHHHhcccc-ceeEEEecC
Confidence 1 33333111 11345788899999999999999966211 134444444411 126789998
Q ss_pred cCChhhHHHHHhcCCeEEECccchhhccCCccHHHHHHc-C-CcEEEccCCCCCCC------CCCHHHHHHHHHHHhccc
Q 012333 284 WVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN------RMSIVDEMYLASLINKGR 355 (466)
Q Consensus 284 ~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~------~~~~~~~~~~~~~~~~~~ 355 (466)
.-+.++++.+.+.|..+.+.+....+. ....++++.. + -.+.+-||.|-..+ ...+..-......+.+.+
T Consensus 158 ~g~~~~~~~~~~~g~~~S~~~~~~~~~--~~~~~~~~~~ip~drillETD~P~~~~~~~~~~~~~p~~i~~~~~~la~~~ 235 (255)
T PF01026_consen 158 SGSPEEAKKFLDLGCYFSFSGAITFKN--SKKVRELIKAIPLDRILLETDAPYLAPDPYRGKPNEPSNIPKVAQALAEIK 235 (255)
T ss_dssp -S-HHHHHHHHHTTEEEEEEGGGGSTT--SHHHHHHHHHS-GGGEEEE-BTTSSECTTSTTSE--GGGHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCceEEecccccccc--cHHHHHHHhcCChhhEEEcCCCCcCCccccCCCCCChHHHHHHHHHHHHHc
Confidence 889999999999999998887644321 1224444433 1 25788999852211 001111111111122111
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 356 EVFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 356 ~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
+++++++.+....|..+++|
T Consensus 236 -----------~~~~e~~~~~~~~N~~r~f~ 255 (255)
T PF01026_consen 236 -----------GISLEELAQIIYENAKRLFG 255 (255)
T ss_dssp -----------TSTHHHHHHHHHHHHHHHHT
T ss_pred -----------CCCHHHHHHHHHHHHHHHhC
Confidence 49999999999999988875
No 139
>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3.5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O ....
Probab=97.48 E-value=0.00022 Score=53.05 Aligned_cols=37 Identities=19% Similarity=0.388 Sum_probs=29.4
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCch
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSAD 58 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~ 58 (466)
..|++|.|+.|++. .-+.++||.|+||+|+.||+...
T Consensus 65 ~lD~VItNa~IiD~----~GI~KADIGIkdG~I~gIGkAGN 101 (121)
T PF00449_consen 65 ALDLVITNALIIDY----TGIVKADIGIKDGRIVGIGKAGN 101 (121)
T ss_dssp C-SEEEEEEEEEET----TEEEEEEEEEETTEEEEEE-EB-
T ss_pred cccEEEeCcEEEec----CCcEEeeEEeeCCEEEEEeccCC
Confidence 68999999999954 23567899999999999999765
No 140
>PF07908 D-aminoacyl_C: D-aminoacylase, C-terminal region; InterPro: IPR012855 D-aminoacylase (Q9AGH8 from SWISSPROT, 3.5.1.81 from EC) hydrolyses a wide variety of N-acyl derivatives of neutral D-amino acids, in a zinc-dependent manner. The enzyme is composed of a small beta-barrel domain and a larger catalytic alpha/beta-barrel that contains a short alpha/beta insert. The overall structure shares significant similarity to the alpha/beta-barrel amidohydrolase superfamily, in which the beta-strands in both barrels superimpose well []. The C-terminal region featured in this entry forms part of the beta-barrel domain, together with a short N-terminal segment. This domain does not seem to contribute to the substrate-binding site or to be involved in the catalytic process.; GO: 0008270 zinc ion binding, 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; PDB: 3GIQ_B 3GIP_B 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A.
Probab=97.13 E-value=0.00034 Score=44.50 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=22.3
Q ss_pred CCCeeEEEEccEEEEECCeeeeccHHHHHHH
Q 012333 428 TENVVSVMCNGQWVMKNKKILLLMRGRLFQL 458 (466)
Q Consensus 428 ~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~ 458 (466)
+..|.+|||||++++++|++.+...|+++++
T Consensus 17 ~~GI~~V~VNG~~vv~~g~~t~~~~G~~lrr 47 (48)
T PF07908_consen 17 AEGIDYVFVNGQIVVEDGEVTGARPGRVLRR 47 (48)
T ss_dssp -BSEEEEEETTEEEECTTEESSS----B---
T ss_pred CCCEEEEEECCEEEEECCeECCCCCCeEecC
Confidence 4689999999999999999999999999875
No 141
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=96.66 E-value=0.022 Score=55.74 Aligned_cols=97 Identities=15% Similarity=0.144 Sum_probs=68.1
Q ss_pred eEEEeecCCh--hhHHHHHhcCCeEEECccchhhc---cCCccHHHHHHcCCcEEEccCCCCCCCC--CCHHHHHHHHHH
Q 012333 278 LSAHTVWVNH--TEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASL 350 (466)
Q Consensus 278 ~~~H~~~~~~--~~~~~~~~~g~~~~~~p~~~~~~---~~~~~~~~~~~~gi~~~~gsD~~~~~~~--~~~~~~~~~~~~ 350 (466)
.|.||..+.. .....++..++.+.+||.++... -...|+..+++.|++++++||.+..... -.+.++...+..
T Consensus 351 RIGHGv~l~~dp~L~~l~~~~qI~levCPlSN~~l~~~~~~HP~~~~l~~Gl~VsInTDDPl~f~~t~~~L~eEY~~a~~ 430 (496)
T cd01319 351 GISHGINLRKVPVLQYLYYLTQIGIAMSPLSNNSLFLSYEKNPFPEFFKRGLNVSLSTDDPLQFHFTKEPLMEEYSIAAQ 430 (496)
T ss_pred ccccccccCCCHHHHHHHHHcCCeEEEecCccHhhhcCcccChHHHHHHCCCeEEEeCCCchhhCCCCCcHHHHHHHHHH
Confidence 3889998853 33445667899999999999755 2346899999999999999999854321 235566554432
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 012333 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (466)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (466)
.. ++|..++. .++.|+.+..++++
T Consensus 431 ~~--------------~Ls~~Dl~-eLarNSV~~Sf~~~ 454 (496)
T cd01319 431 VW--------------KLSTCDMC-ELARNSVLQSGFEH 454 (496)
T ss_pred Hc--------------CCCHHHHH-HHHHHHHHHhCCCH
Confidence 21 48887775 44568888777653
No 142
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=96.64 E-value=0.045 Score=54.77 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=68.7
Q ss_pred eEEEeecCC--hhhHHHHHhcCCeEEECccchhhc---cCCccHHHHHHcCCcEEEccCCCCCCCC--CCHHHHHHHHHH
Q 012333 278 LSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASL 350 (466)
Q Consensus 278 ~~~H~~~~~--~~~~~~~~~~g~~~~~~p~~~~~~---~~~~~~~~~~~~gi~~~~gsD~~~~~~~--~~~~~~~~~~~~ 350 (466)
.|.||..+. +....++...++.+.+||.++... -...|+..+++.|++++++||.+..... -.+.++...+..
T Consensus 463 RIgHGi~l~~dp~L~yl~~~~qI~LevCPtSN~~l~~~y~~HP~~~~~~~Gl~VSLsTDDPl~f~~T~epL~EEY~~aa~ 542 (611)
T TIGR01429 463 GINHGILLRKVPVLQYLYYLTQIPIAMSPLSNNSLFLEYSKNPLPEYLHKGLNVSLSTDDPLQFHYTKEALMEEYAIAAQ 542 (611)
T ss_pred ccccceecCCCHHHHHHHHHcCCeEEEcCCcchhhccChhhChHHHHHHCCCeEEEcCCCchhhCCCCCcHHHHHHHHHH
Confidence 388999874 444555678899999999999754 2345899999999999999999854321 235566554432
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 012333 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (466)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (466)
.. +++..++.++ ..|+.+..++++
T Consensus 543 ~~--------------~Ls~~Dl~eL-arNSV~~S~~~~ 566 (611)
T TIGR01429 543 VW--------------KLSTCDMCEL-ARNSVLQSGFEH 566 (611)
T ss_pred Hh--------------CCCHHHHHHH-HHHHHHHhCCCH
Confidence 21 4888777654 568888877753
No 143
>PLN03055 AMP deaminase; Provisional
Probab=96.57 E-value=0.026 Score=56.17 Aligned_cols=96 Identities=18% Similarity=0.111 Sum_probs=70.4
Q ss_pred eEEEeecC--ChhhHHHHHhcCCeEEECccchhhc---cCCccHHHHHHcCCcEEEccCCCCCCCC--CCHHHHHHHHHH
Q 012333 278 LSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASL 350 (466)
Q Consensus 278 ~~~H~~~~--~~~~~~~~~~~g~~~~~~p~~~~~~---~~~~~~~~~~~~gi~~~~gsD~~~~~~~--~~~~~~~~~~~~ 350 (466)
.|.||..+ +++.+.+++..++.+.+||.++... -...|+..+++.|++++++||.+..... -.+.++...+..
T Consensus 441 RIgHGi~l~~dP~L~yl~~~~qI~LevCPlSN~~l~~~y~~HP~~~~~~~Gl~VSInTDDPl~f~tT~epL~eEY~~aa~ 520 (602)
T PLN03055 441 NIAHGNNLRKSPGLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFARGLNVSLSTDDPLQIHLTKEPLVEEYSIAAQ 520 (602)
T ss_pred eecCccccCCCHHHHHHHHHcCCeEEEccCcchhhccchhhChHHHHHHCCCEEEEcCCCcchhcCCCCcHHHHHHHHHH
Confidence 47899886 3667788889999999999999754 2245899999999999999999865321 135566555432
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
.. ++|..+..+ ++.|+.+..+++
T Consensus 521 ~~--------------~LS~~DL~e-LarNSV~~Sf~~ 543 (602)
T PLN03055 521 VW--------------KLSSCDLCE-IARNSVLQSGFP 543 (602)
T ss_pred Hh--------------CCCHHHHHH-HHHHHHHHhcCC
Confidence 21 388888754 466888888775
No 144
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=96.54 E-value=0.33 Score=44.21 Aligned_cols=100 Identities=16% Similarity=0.141 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC----------hhhH
Q 012333 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----------HTEI 290 (466)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----------~~~~ 290 (466)
+.+.+.++++.+.++|+++.+|+...... .....+..+ .-+.++.|..... .+.+
T Consensus 108 ~~~~~~~~~~~~~~~gl~v~~~~~~~~l~------------~l~~l~~~~---~l~ivldH~G~p~~~~~~~~~~~~~~l 172 (263)
T cd01311 108 NKDELDEIAKRAAELGWHVQVYFDAVDLP------------ALLPFLQKL---PVAVVIDHFGRPDVTKGVDGAEFAALL 172 (263)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeCHhhHH------------HHHHHHHHC---CCCEEEECCCCCCCCCCCCCHhHHHHH
Confidence 66778889999999999999998532110 022233333 4568889966432 1223
Q ss_pred HHHHhcCCeEEECccchhhcc--C---C-ccHHHHHHcC-CcEEEccCCCCC
Q 012333 291 GLLSRAGVKVSHCPASAMRML--G---F-APIKEMLHAD-ICVSLGTDGAPS 335 (466)
Q Consensus 291 ~~~~~~g~~~~~~p~~~~~~~--~---~-~~~~~~~~~g-i~~~~gsD~~~~ 335 (466)
+.++..++.+.++-....... . . +-++.+++.| -++.+|||+|..
T Consensus 173 ~~l~~pNV~~k~Sg~~~~~~~~~~~~~~~~~~~~~~~~g~dRlmfGSD~P~~ 224 (263)
T cd01311 173 KLIEEGNVWVKVSGPYRLSVKQEAYADVIAFARQIVAAAPDRLVWGTDWPHP 224 (263)
T ss_pred HHHhcCCEEEEecchhhcCCCCCCHHHHHHHHHHHHHhCCCcEEEeCCCCCC
Confidence 333223555554432211100 0 1 1223334445 468899999864
No 145
>PLN02768 AMP deaminase
Probab=96.06 E-value=0.051 Score=55.52 Aligned_cols=95 Identities=18% Similarity=0.153 Sum_probs=68.7
Q ss_pred EEEeecCC--hhhHHHHHhcCCeEEECccchhhc---cCCccHHHHHHcCCcEEEccCCCCCCCC--CCHHHHHHHHHHH
Q 012333 279 SAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASLI 351 (466)
Q Consensus 279 ~~H~~~~~--~~~~~~~~~~g~~~~~~p~~~~~~---~~~~~~~~~~~~gi~~~~gsD~~~~~~~--~~~~~~~~~~~~~ 351 (466)
|.||..+. +....++...++.+.+||.++... -...|+..+++.|++|+++||.+..... -.+.++...+...
T Consensus 675 IgHGv~l~kdP~LqyL~~l~qIgLevCPlSN~~l~~~y~~HPf~~f~~~GL~VSLNTDDPL~fhtT~epL~EEYsvAak~ 754 (835)
T PLN02768 675 IAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASV 754 (835)
T ss_pred cCCccccCcCHHHHHHHHHcCCeEEECCCcchhhhcchhhChHHHHHHCCCEEEEcCCCccccCCCCCCHHHHHHHHHHH
Confidence 68988863 455567777899999999999754 2345899999999999999999865322 1356665554332
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 352 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 352 ~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
. +++..++.++ +.|+.+..+++
T Consensus 755 ~--------------~LS~~DL~EL-arNSV~aSff~ 776 (835)
T PLN02768 755 W--------------KLSSCDLCEI-ARNSVYQSGFS 776 (835)
T ss_pred h--------------CcCHHHHHHH-HHHHHHHhcCC
Confidence 1 4888777755 56888777775
No 146
>PRK06361 hypothetical protein; Provisional
Probab=95.95 E-value=0.47 Score=41.55 Aligned_cols=96 Identities=14% Similarity=0.062 Sum_probs=63.8
Q ss_pred eeEEEeecCChhhHHHHHhcCCeEEECccchhhccCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccc
Q 012333 277 LLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE 356 (466)
Q Consensus 277 ~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (466)
.++.|-..+..+.++.+++.++.+.++...........-++.+.+.|++++++||..... ++. .+..+..+.
T Consensus 115 dvlaHpd~~~~~~~~~~~~~~~~lEin~~~~~~~~~~~~l~~a~~~gi~vv~~SDaH~~~---d~~-~~~~~~~i~---- 186 (212)
T PRK06361 115 DILAHPGLITEEEAELAAENGVFLEITARKGHSLTNGHVARIAREAGAPLVINTDTHAPS---DLI-TYEFARKVA---- 186 (212)
T ss_pred cEecCcchhhHHHHHHHHHcCeEEEEECCCCcccchHHHHHHHHHhCCcEEEECCCCCHH---HHH-HHHHHHHHH----
Confidence 467888777788899999999998887522211111223445567799999999976221 222 233222222
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 012333 357 VFANGTTDPAALPAETVLRMATINGAKSVLW 387 (466)
Q Consensus 357 ~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (466)
...+++.++++.+.+.||+.+++.
T Consensus 187 -------~~~gl~~~~v~~~~~~~~~~~~~~ 210 (212)
T PRK06361 187 -------LGAGLTEKELEEALENNPKLLLKR 210 (212)
T ss_pred -------cCCCCCHHHHHHHHHHhHHHHHHh
Confidence 223699999999999999999864
No 147
>PTZ00310 AMP deaminase; Provisional
Probab=95.56 E-value=0.14 Score=55.92 Aligned_cols=96 Identities=18% Similarity=0.182 Sum_probs=69.9
Q ss_pred eEEEeecCC--hhhHHHHHhcCCeEEECccchhhc---cCCccHHHHHHcCCcEEEccCCCCCCCC--CCHHHHHHHHHH
Q 012333 278 LSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASL 350 (466)
Q Consensus 278 ~~~H~~~~~--~~~~~~~~~~g~~~~~~p~~~~~~---~~~~~~~~~~~~gi~~~~gsD~~~~~~~--~~~~~~~~~~~~ 350 (466)
.|.||..+. +..+.+++..++.+.+||.++... -...|+..+++.|++++++||.+..... -.+.++...+..
T Consensus 1134 RIgHGi~l~~dp~L~yl~~l~qI~LevCPlSN~~l~~sy~~hP~~~f~~~Gl~VSLnTDDPl~f~tT~EpL~eEYsiaa~ 1213 (1453)
T PTZ00310 1134 SICHGINLRNDPPMQYLYYLAQIGLHVSPLSNNALFLAFLENPFPVFFHRGLNVSLSTDDPLMFHQTQEPLIEEYSIAAR 1213 (1453)
T ss_pred cccchhhhCcCHHHHHHHHHcCCeEEECCCchHhhhhchhhCcHHHHHHCCCEEEECCCCccccCCCcccHHHHHHHHHH
Confidence 388999873 455667888999999999999754 2346999999999999999999865322 125566554432
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
.. +++..++.++ ..|+...-|++
T Consensus 1214 ~~--------------~LS~~Dl~el-arNSV~~SGf~ 1236 (1453)
T PTZ00310 1214 VW--------------GLSLNDLCEI-ARNSVLQSGFD 1236 (1453)
T ss_pred Hh--------------CCCHHHHHHH-HHHHHHHcCCC
Confidence 21 4888887765 55887777765
No 148
>KOG3020 consensus TatD-related DNase [Replication, recombination and repair]
Probab=93.24 E-value=6.5 Score=35.91 Aligned_cols=71 Identities=14% Similarity=0.170 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEEC
Q 012333 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~ 303 (466)
.+++-+++|.....|+.+|+-+.... ..+++........+-++.|+..-+.++++.+.+.++.+..+
T Consensus 136 vFekQl~LA~~~~~Pl~iH~r~a~~d-------------~~eIl~~~~~~~~~~vvvHsFtGs~e~~~~~lk~~~yig~~ 202 (296)
T KOG3020|consen 136 VFEKQLDLAKRLKLPLFIHCRSAHED-------------LLEILKRFLPECHKKVVVHSFTGSAEEAQKLLKLGLYIGFT 202 (296)
T ss_pred HHHHHHHHHHHccCCeeeechhhhHH-------------HHHHHHHhccccCCceEEEeccCCHHHHHHHHHccEEeccc
Confidence 36788899999999999999663221 34444444332232578999999999999999999666655
Q ss_pred ccch
Q 012333 304 PASA 307 (466)
Q Consensus 304 p~~~ 307 (466)
+...
T Consensus 203 g~~~ 206 (296)
T KOG3020|consen 203 GCSL 206 (296)
T ss_pred ceee
Confidence 5543
No 149
>PTZ00310 AMP deaminase; Provisional
Probab=93.12 E-value=0.53 Score=51.63 Aligned_cols=96 Identities=14% Similarity=0.135 Sum_probs=65.9
Q ss_pred eEEEeecCCh-hhHHHH-HhcCCeEEECccchhhcc----CCccHHHHHHcCCcEEEccCCCCCCCCC--CHHHHHHHHH
Q 012333 278 LSAHTVWVNH-TEIGLL-SRAGVKVSHCPASAMRML----GFAPIKEMLHADICVSLGTDGAPSNNRM--SIVDEMYLAS 349 (466)
Q Consensus 278 ~~~H~~~~~~-~~~~~~-~~~g~~~~~~p~~~~~~~----~~~~~~~~~~~gi~~~~gsD~~~~~~~~--~~~~~~~~~~ 349 (466)
.|.||..+.. ..+..+ +..++.+.+||.++.... ...|+..+++.|++++++||.+.....- .+.++...+.
T Consensus 504 RI~HGi~l~d~p~LqyL~~e~qI~LeVCPlSN~~l~v~sy~~HPi~~fl~~GL~VSLNTDDPl~F~tt~EpL~EEY~iaa 583 (1453)
T PTZ00310 504 VITRATSIADYPVLQYLCGLHRVGLTVSPLRDHALSITAYFDHPLPKFLHRCLRVSISTSDPLYFHHHSQPLIEEYATAM 583 (1453)
T ss_pred cccchhccCchHHHHHHHHHcCCeEEECCCcccccCCCchhhCcHHHHHHCCCEEEECCCCccccCCCCccHHHHHHHHH
Confidence 4788877643 334444 488999999999997652 3458999999999999999998653321 3556655443
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
-.. +++..++.++ +.|+....+++
T Consensus 584 q~~--------------gLS~~DL~eL-arNSV~aSf~~ 607 (1453)
T PTZ00310 584 KLF--------------SLSPLDTTEL-ARNSVLNSSFP 607 (1453)
T ss_pred HHh--------------CcCHHHHHHH-HHHHHHHhCCC
Confidence 221 4888777654 45666666654
No 150
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=92.61 E-value=5.9 Score=36.59 Aligned_cols=145 Identities=14% Similarity=0.095 Sum_probs=75.6
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccC-CCCeeEEEee--c-CChhhHHHHHh
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFL-QNNLLSAHTV--W-VNHTEIGLLSR 295 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~--~-~~~~~~~~~~~ 295 (466)
.++..+..+.+.|.++|+++.+|............. ...+..+-..+... .-+.++.|+. + ...+.+..+..
T Consensus 141 ~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~~~~~----~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a~~~a~~ 216 (293)
T COG2159 141 PDDPRLYPIYEAAEELGVPVVIHTGAGPGGAGLEKG----HSDPLYLDDVARKFPELKIVLGHMGEDYPWELEAIELAYA 216 (293)
T ss_pred CCChHHHHHHHHHHHcCCCEEEEeCCCCCCcccccC----CCCchHHHHHHHHCCCCcEEEEecCCCCchhHHHHHHHHh
Confidence 344457899999999999999998764432111100 01122222222222 3467899986 2 22233333322
Q ss_pred c-CCeEEECccchhhccCC-ccHHHHHHcC-CcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 012333 296 A-GVKVSHCPASAMRMLGF-APIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372 (466)
Q Consensus 296 ~-g~~~~~~p~~~~~~~~~-~~~~~~~~~g-i~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~ 372 (466)
. ++.+...-.... ... .-+..+.+.+ -++.+|||+|... +. ........ .+++.+.
T Consensus 217 ~~nvy~d~s~~~~~--~~~~~~~~~~~~~~~dkilFGSD~P~~~----~~--~~l~~~~~-------------l~l~~e~ 275 (293)
T COG2159 217 HPNVYLDTSGVRPK--YFAPPLLEFLKELGPDKILFGSDYPAIH----PE--VWLAELDE-------------LGLSEEV 275 (293)
T ss_pred CCCceeeeeccccc--cCChHHHHHHHhcccCeEEecCCCCCcC----HH--HHHHHHHh-------------cCCCHHH
Confidence 2 333332211000 001 1233444422 4689999976432 22 12222121 1377788
Q ss_pred HHHHHhHHHHHHcCCCC
Q 012333 373 VLRMATINGAKSVLWDN 389 (466)
Q Consensus 373 al~~~T~~~A~~lgl~~ 389 (466)
.-+.+-.|++++++++.
T Consensus 276 k~kiL~~NA~rll~l~~ 292 (293)
T COG2159 276 KEKILGENAARLLGLDP 292 (293)
T ss_pred HHHHHHHhHHHHhCcCC
Confidence 88889999999999853
No 151
>PRK07945 hypothetical protein; Provisional
Probab=92.42 E-value=7.1 Score=36.89 Aligned_cols=47 Identities=17% Similarity=0.116 Sum_probs=31.4
Q ss_pred hhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCC
Q 012333 287 HTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (466)
Q Consensus 287 ~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~ 334 (466)
.+.++.+++.|+.+.++-... +. ....-++.+.+.|+++++|||...
T Consensus 248 ~~i~~a~~e~g~~lEINt~~~-r~~P~~~il~~a~e~G~~vtigSDAH~ 295 (335)
T PRK07945 248 EAVFAACREHGTAVEINSRPE-RRDPPTRLLRLALDAGCLFSIDTDAHA 295 (335)
T ss_pred HHHHHHHHHhCCEEEEeCCCC-CCCChHHHHHHHHHcCCeEEecCCCCC
Confidence 355788888999887774322 21 111235667788999999999643
No 152
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria.
Probab=91.91 E-value=0.05 Score=42.28 Aligned_cols=15 Identities=47% Similarity=1.052 Sum_probs=14.2
Q ss_pred CcEEeecccccccCC
Q 012333 75 SQILLPGFVNTHVHT 89 (466)
Q Consensus 75 G~~v~PG~ID~H~H~ 89 (466)
|++++|||||.|+|+
T Consensus 1 ~kli~~g~vd~hVhl 15 (142)
T PF12890_consen 1 GKLILPGLVDVHVHL 15 (142)
T ss_pred Cceeehhhhhhhhhh
Confidence 689999999999998
No 153
>COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
Probab=90.89 E-value=8.6 Score=34.26 Aligned_cols=48 Identities=13% Similarity=0.091 Sum_probs=30.8
Q ss_pred hhHHHHHhcCCeEEECccchhhccCCccHHHHHHcCCcEEEccCCCCC
Q 012333 288 TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPS 335 (466)
Q Consensus 288 ~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~gi~~~~gsD~~~~ 335 (466)
+.++.+.+.|+.+.+.-..........-++.+.+.|+.++++||....
T Consensus 151 ~~~~~~~~~g~aleins~~~~~~~~~~~~~~~~e~G~~~~i~tDaH~~ 198 (237)
T COG1387 151 ELIELAEKNGKALEINSRPGRLDPNSEILRLARELGVKLAIGTDAHRP 198 (237)
T ss_pred HHHHHHHHhCcEEeecCCcCccCchHHHHHHHHHhCCeEEeecCcCCh
Confidence 567778888888776543111112223455566779999999997643
No 154
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=89.60 E-value=3.2 Score=37.03 Aligned_cols=97 Identities=13% Similarity=0.101 Sum_probs=60.0
Q ss_pred ChhhHHHHHhcCCeEEECccchhhcc------CC----ccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhccc
Q 012333 286 NHTEIGLLSRAGVKVSHCPASAMRML------GF----APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 355 (466)
Q Consensus 286 ~~~~~~~~~~~g~~~~~~p~~~~~~~------~~----~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~ 355 (466)
..+.++.+++.|+.+.++-....+.. .. ..++...+.|+++++|||......-.++.+....+..
T Consensus 120 ~~~~~~~a~~~gv~lEIn~s~~~~~~~~~r~~~~~~~~~~~~~~~~~g~piiisSdAh~~~~l~~~~~~~~l~~~----- 194 (237)
T PRK00912 120 NHVLAKEAARNNVAIEFNLRDILKSRGGRRARTLSNFRDNLALARKYDFPLVLTSGAMSCYDLRSPREMIALAEL----- 194 (237)
T ss_pred CHHHHHHHHHCCeEEEEEchHhhhhcccHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcccccCCHHHHHHHHHH-----
Confidence 34667888889988877654322211 01 2334455679999999997643222233333333321
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC-CcccccccC
Q 012333 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWD-NDIGSLEAG 397 (466)
Q Consensus 356 ~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~-~~~G~i~~G 397 (466)
.|++.++++.+++.+|.+++... .+.+.|..|
T Consensus 195 ----------~Gl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 227 (237)
T PRK00912 195 ----------FGMEEDEALKALSYYPESIIKKNRNRKNYVIEG 227 (237)
T ss_pred ----------cCCCHHHHHHHHHHhHHHHHHhhccCCCccccc
Confidence 25999999999999999999653 233445444
No 155
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=88.24 E-value=1.4 Score=40.05 Aligned_cols=167 Identities=11% Similarity=-0.006 Sum_probs=77.4
Q ss_pred cCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEE
Q 012333 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH 281 (466)
Q Consensus 202 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 281 (466)
+.+--.++...........++.....+.+.|.++++++.+|+.............. .......+..+ -+-+.++.|
T Consensus 96 ~~g~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~H~g~~~~~~~~~~~~~--~~~~~~~~~~~--P~l~ii~~H 171 (273)
T PF04909_consen 96 ELGFRGVKLHPDLGGFDPDDPRLDDPIFEAAEELGLPVLIHTGMTGFPDAPSDPAD--PEELEELLERF--PDLRIILAH 171 (273)
T ss_dssp TTTESEEEEESSETTCCTTSGHCHHHHHHHHHHHT-EEEEEESHTHHHHHHHHHHH--HHHHTTHHHHS--TTSEEEESG
T ss_pred ccceeeeEecCCCCccccccHHHHHHHHHHHHhhccceeeeccccchhhhhHHHHH--HHHHHHHHHHh--cCCeEEEec
Confidence 44334455444333333333333358999999999999999751111100000000 00001112221 224578889
Q ss_pred eecC--Ch-hhHHHHHhc-CCeEEECccc-----hhhccCCccHHHHHHc-C-CcEEEccCCCCCCCCCCHHHHHHHHHH
Q 012333 282 TVWV--NH-TEIGLLSRA-GVKVSHCPAS-----AMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASL 350 (466)
Q Consensus 282 ~~~~--~~-~~~~~~~~~-g~~~~~~p~~-----~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~~~~~~~~~~~~~~ 350 (466)
+... .. +.++.+.+. ++.+.+.-.. .......+.+..+++. | -++.+|||++... ..........
T Consensus 172 ~G~~~~~~~~~~~l~~~~~nvy~d~s~~~~~~~~~~~~~~~~~l~~~~~~~g~drilfGSD~P~~~----~~~~~~~~~~ 247 (273)
T PF04909_consen 172 LGGPFPWWEEALRLLDRFPNVYVDLSGIPPFWYFWPPSFDRPFLRRAVDEFGPDRILFGSDYPHPD----GASPYEYIWE 247 (273)
T ss_dssp GGTTHHHHHHHHHHHHHHTTEEEECHSHHSSEEEETTHHCHHHHHHHHHHHTGGGEEEE--TTSST----HHHHHHHHHH
T ss_pred CcccchhHHHHHHHHHhCCcccccccccccccccCcccccHHHHHHHHHHhCCceEEecCCCCCCC----ccccHHHHHH
Confidence 8775 22 334444433 3444332110 0000122344555444 3 3799999997542 2222111111
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 012333 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (466)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (466)
..... .+|.++.=+.+..|++++++|
T Consensus 248 ~~~~~-----------~l~~~~~~~i~~~NA~rl~~l 273 (273)
T PF04909_consen 248 AYFLD-----------DLSEEEREKILYDNARRLYGL 273 (273)
T ss_dssp HHHHH-----------HSSHHHHHHHHTHHHHHHHTC
T ss_pred hhhcc-----------CCCHHHHHHHHhHhHHHHcCc
Confidence 11000 158888999999999999885
No 156
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=87.84 E-value=11 Score=33.61 Aligned_cols=137 Identities=12% Similarity=0.116 Sum_probs=81.6
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCe
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~ 299 (466)
.+.+.+..++++|++.+++++.|..+.....-.. ..+.....+.-..+.+.-|+... .......|+.
T Consensus 142 ~~n~vl~~a~elA~dvdc~vqLHtes~~~~~~~~---------i~~~ak~~G~~~~~VVkHha~p~----v~~~~~~Gi~ 208 (285)
T COG1831 142 ASNEVLEYAMELAKDVDCAVQLHTESLDEETYEE---------IAEMAKEAGIKPYRVVKHHAPPL----VLKCEEVGIF 208 (285)
T ss_pred HHHHHHHHHHHHhhcCCCcEEEecCCCChHHHHH---------HHHHHHHhCCCcceeEeecCCcc----chhhhhcCcC
Confidence 3455678889999999999999997654322111 22334444443334444444331 1222234554
Q ss_pred EEECccchhhccCCccHHHHHHcCCcEEEccCCCC----CCCCCCHHHHH-HHHHHHhcccccccCCCCCCCCCCHHHHH
Q 012333 300 VSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEM-YLASLINKGREVFANGTTDPAALPAETVL 374 (466)
Q Consensus 300 ~~~~p~~~~~~~~~~~~~~~~~~gi~~~~gsD~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ls~~~al 374 (466)
.++- .....+...++.|-...+=||+.- .+.-+.++..- +...+++++ .++.+.+.
T Consensus 209 pSV~-------asr~~v~~a~~~g~~FmmETDyIDDp~RpgavL~PktVPrr~~~i~~~g------------~~~ee~vy 269 (285)
T COG1831 209 PSVP-------ASRKNVEDAAELGPRFMMETDYIDDPRRPGAVLGPKTVPRRTREILEKG------------DLTEEDVY 269 (285)
T ss_pred Cccc-------ccHHHHHHHHhcCCceEeecccccCcccCCCcCCccchhHHHHHHHHhc------------CCcHHHHH
Confidence 3221 112257788899999999999852 11223444332 334444443 37889999
Q ss_pred HHHhHHHHHHcCCC
Q 012333 375 RMATINGAKSVLWD 388 (466)
Q Consensus 375 ~~~T~~~A~~lgl~ 388 (466)
+..-.+|.+++|++
T Consensus 270 ~i~~E~pe~VYg~~ 283 (285)
T COG1831 270 RIHVENPERVYGIE 283 (285)
T ss_pred HHHHhCHHHHhCcc
Confidence 99999999999874
No 157
>TIGR01856 hisJ_fam histidinol phosphate phosphatase HisJ family. This model represents the histidinol phosphate phosphatase HisJ of Bacillus subtilis, and related proteins from a number of species within a larger family of phosphatases in the PHP hydrolase family. HisJ catalyzes the penultimate step of histidine biosynthesis but shows no homology to the functionally equivalent sequence in E. coli, a domain of the bifunctional HisB protein. Note, however, that many species have two members and that Clostridium perfringens, predicted not to make histidine, has five members of this family; this family is designated subfamily rather than equivalog to indicate that members may not all act as HisJ.
Probab=86.70 E-value=24 Score=31.84 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=29.3
Q ss_pred hhHHHHHhcCCeEEECccchhhc--cCC----ccHHHHHHcCCcEEEccCCC
Q 012333 288 TEIGLLSRAGVKVSHCPASAMRM--LGF----APIKEMLHADICVSLGTDGA 333 (466)
Q Consensus 288 ~~~~~~~~~g~~~~~~p~~~~~~--~~~----~~~~~~~~~gi~~~~gsD~~ 333 (466)
+.++.+++.|+.+.++-. .++. ... .-++.+.+.|+++++|||.-
T Consensus 189 ~il~~~~~~g~~lEiNt~-g~r~~~~~~yP~~~il~~~~~~g~~itlgSDAH 239 (253)
T TIGR01856 189 RILKLVASQGKALEFNTS-GLRKPLEEAYPSKELLNLAKELGIPLVLGSDAH 239 (253)
T ss_pred HHHHHHHHcCCEEEEEcH-hhcCCCCCCCCCHHHHHHHHHcCCCEEecCCCC
Confidence 446778888988877643 2222 111 23455667799999999964
No 158
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=85.76 E-value=27 Score=31.63 Aligned_cols=136 Identities=10% Similarity=0.002 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccC-CCCeeEEEeecCCh---------hhHHH
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFL-QNNLLSAHTVWVNH---------TEIGL 292 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~~~~---------~~~~~ 292 (466)
..+++.++..+.+|+.+..+..... ....+...... +-+.++.|+..... +.+.+
T Consensus 124 ~~~r~~~~rL~~~gl~fdl~~~~~q---------------l~~~i~l~~~~Pd~~~VldH~G~p~~~~~~~~~w~~~m~~ 188 (279)
T COG3618 124 PAWRANVERLAKLGLHFDLQVDPHQ---------------LPDLIPLALKAPDVNFVLDHCGRPDIKINLEDPWKAALAR 188 (279)
T ss_pred HHHHHHHHHHHhcCCeEEEEeChhh---------------hHHHHHHHhhCCCCCEEeccCCCCCccccccCHHHHHHHH
Confidence 5678888889999998877764321 11222222222 24577888766521 23444
Q ss_pred HHhc-CCeEEECccchhhccC--CccH----HHHHHc-C-CcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCC
Q 012333 293 LSRA-GVKVSHCPASAMRMLG--FAPI----KEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 363 (466)
Q Consensus 293 ~~~~-g~~~~~~p~~~~~~~~--~~~~----~~~~~~-g-i~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (466)
+++. ++.+.+.-...+.... ...+ ..+++. | -++.+|||+|...-..+ +.....+..- -
T Consensus 189 la~~pNv~~KlSG~~~~~~~~w~~~~v~p~~e~~i~~fg~dR~vfGSdwPv~~l~~~-~~~~~~~~~~---~-------- 256 (279)
T COG3618 189 LARRPNVWAKLSGVYAYSDESWTVEDVRPYVEELIELFGWDRFVFGSDWPVTSLESD-FASWVAATRE---L-------- 256 (279)
T ss_pred HHhCCCeEEEEeeecccccCCCCHHHHHHHHHHHHHhcCccceEecCCCCcccccCC-hHHHHHHHHH---H--------
Confidence 4433 4444333211211111 1122 223333 5 57899999986532211 1222211110 0
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCC
Q 012333 364 DPAALPAETVLRMATINGAKSVLW 387 (466)
Q Consensus 364 ~~~~ls~~~al~~~T~~~A~~lgl 387 (466)
. .+ +..+=-+....||++++++
T Consensus 257 v-~~-~~~er~~i~~~NA~rly~~ 278 (279)
T COG3618 257 V-PG-DAAERARILVDNARRLYRL 278 (279)
T ss_pred c-CC-CHHHHHHHHhhCHHHHhCC
Confidence 0 02 4777788889999998865
No 159
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=83.58 E-value=15 Score=33.43 Aligned_cols=108 Identities=14% Similarity=0.192 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHH-HHhhhc--cCCCCeeEEEeecCChhhHHHHHhcC--
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKIE--FLQNNLLSAHTVWVNHTEIGLLSRAG-- 297 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~H~~~~~~~~~~~~~~~g-- 297 (466)
+.+-..++...+.|+++.+|-.......+.... ....++ .++.+. +..-+.+++|.+. .+.++..++.+
T Consensus 118 ~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdr----E~~Fi~~vl~pl~~~fP~LKIV~EHiTT--~dav~~v~~~~~n 191 (344)
T COG0418 118 EKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDR----EAAFIESVLEPLRQRFPKLKIVLEHITT--KDAVEYVKDANNN 191 (344)
T ss_pred HHHHHHHHHHHHcCCeEEEecccCCccccchhh----HHHHHHHHHHHHHhhCCcceEEEEEecc--HHHHHHHHhcCcc
Confidence 345566777788899999998765443321111 001111 233222 2344678899874 55566666665
Q ss_pred CeEEECccchhhc------cC----------------CccHHHHHHcC-CcEEEccCCCCCC
Q 012333 298 VKVSHCPASAMRM------LG----------------FAPIKEMLHAD-ICVSLGTDGAPSN 336 (466)
Q Consensus 298 ~~~~~~p~~~~~~------~~----------------~~~~~~~~~~g-i~~~~gsD~~~~~ 336 (466)
+..+++|+.-+.. .+ ...++++.-.| -.+.+|||+.|+.
T Consensus 192 laATIT~hHL~~nrnd~l~Ggi~Ph~fClPilKr~~hr~AL~~aa~sg~~kfFlGtDSAPH~ 253 (344)
T COG0418 192 LAATITPHHLLLNRNDMLVGGIRPHLFCLPILKRETHREALREAATSGHPKFFLGTDSAPHA 253 (344)
T ss_pred eeeEeehhheeeehhhhhcCCCCcceeeeccccchhhHHHHHHHHhcCCCcEEecCCCCCCc
Confidence 5677777754311 11 12344444444 5699999998763
No 160
>PRK07328 histidinol-phosphatase; Provisional
Probab=83.43 E-value=35 Score=31.04 Aligned_cols=45 Identities=22% Similarity=0.324 Sum_probs=30.0
Q ss_pred hhHHHHHhcCCeEEECccchhhc--cCC----ccHHHHHHcCCcEEEccCCC
Q 012333 288 TEIGLLSRAGVKVSHCPASAMRM--LGF----APIKEMLHADICVSLGTDGA 333 (466)
Q Consensus 288 ~~~~~~~~~g~~~~~~p~~~~~~--~~~----~~~~~~~~~gi~~~~gsD~~ 333 (466)
+.++.+++.|+.+.++-. .++. ... .-++.+.+.|+++++|||..
T Consensus 181 ~il~~~~~~g~~lEiNt~-~~r~~~~~~yp~~~il~~~~~~g~~itigSDAH 231 (269)
T PRK07328 181 EALDVIAAAGLALEVNTA-GLRKPVGEIYPSPALLRACRERGIPVVLGSDAH 231 (269)
T ss_pred HHHHHHHHcCCEEEEEch-hhcCCCCCCCCCHHHHHHHHHcCCCEEEeCCCC
Confidence 456788888998877743 2222 111 23456678899999999964
No 161
>PRK08609 hypothetical protein; Provisional
Probab=81.68 E-value=67 Score=32.98 Aligned_cols=46 Identities=17% Similarity=0.228 Sum_probs=31.4
Q ss_pred hhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCC
Q 012333 288 TEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (466)
Q Consensus 288 ~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~ 334 (466)
+.++.+++.|+.+.++-.+. +. .....++.+.+.|+++++|||...
T Consensus 483 ~i~~~a~~~G~~lEINa~~~-r~~~~~~~~~~~~e~Gv~i~igSDAH~ 529 (570)
T PRK08609 483 QLIELAKETNTALELNANPN-RLDLSAEHLKKAQEAGVKLAINTDAHH 529 (570)
T ss_pred HHHHHHHHhCCEEEEcCCcc-ccCccHHHHHHHHHcCCEEEEECCCCC
Confidence 33556688898887775432 22 223356778899999999999653
No 162
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=73.73 E-value=4.2 Score=34.80 Aligned_cols=49 Identities=12% Similarity=0.087 Sum_probs=27.8
Q ss_pred hhhHHHHHhcCCeEEECccchhhccC---CccHHHHHHcCCcEEEccCCCCC
Q 012333 287 HTEIGLLSRAGVKVSHCPASAMRMLG---FAPIKEMLHADICVSLGTDGAPS 335 (466)
Q Consensus 287 ~~~~~~~~~~g~~~~~~p~~~~~~~~---~~~~~~~~~~gi~~~~gsD~~~~ 335 (466)
+..+..+.+.|+..-++-.+-....+ ..-..+++++++.-.++||....
T Consensus 147 ~~~lyeLid~ga~sQvts~Sl~GlfGK~ikK~a~~~iE~~L~hFiASDAHn~ 198 (254)
T COG4464 147 PYLLYELIDKGAYSQVTSSSLAGLFGKKIKKFALQLIEANLVHFIASDAHNV 198 (254)
T ss_pred hHHHHHHHhcccceeechHhHHhhhhHHHHHHHHHHHHcccceeeecccccc
Confidence 44455566666655444333322211 11234678999988899997543
No 163
>PRK06740 histidinol-phosphatase; Validated
Probab=68.23 E-value=1.1e+02 Score=28.92 Aligned_cols=44 Identities=9% Similarity=0.114 Sum_probs=28.6
Q ss_pred HHHHHhcCCeEEECccchhhc--cCCc----cHHHHHHcCCcEEEccCCC
Q 012333 290 IGLLSRAGVKVSHCPASAMRM--LGFA----PIKEMLHADICVSLGTDGA 333 (466)
Q Consensus 290 ~~~~~~~g~~~~~~p~~~~~~--~~~~----~~~~~~~~gi~~~~gsD~~ 333 (466)
++.+++.|+.+.++-....+. .... -++.+.+.|+++++|||+.
T Consensus 245 ~~a~~~~g~~lEINt~~~~r~~~~e~yP~~~il~~~~e~Gv~~tlgSDAH 294 (331)
T PRK06740 245 ARALVETNTATEINAGLYYRYPVREMCPSPLFLQVLAKHEVPITLSSDAH 294 (331)
T ss_pred HHHHHHcCCEEEEECccccCCCCCCCCcCHHHHHHHHHCCCeEEEeeCCC
Confidence 466778888887765322221 1122 3456678899999999964
No 164
>COG1603 RPP1 RNase P/RNase MRP subunit p30 [Translation, ribosomal structure and biogenesis]
Probab=65.31 E-value=47 Score=29.12 Aligned_cols=86 Identities=15% Similarity=0.166 Sum_probs=56.0
Q ss_pred ChhhHHHHHhcCCeEEECccchhhccCC----------ccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhccc
Q 012333 286 NHTEIGLLSRAGVKVSHCPASAMRMLGF----------APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 355 (466)
Q Consensus 286 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~----------~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~ 355 (466)
....++.++++++.+.+......+..+. ..++...+.++++.++||.......-.+.+-+..+...
T Consensus 115 dh~~a~laa~~~valeisl~~ll~~~g~~Ra~~l~~lr~~lrl~rk~~v~ivvtS~A~s~~elrsP~dv~sl~~~l---- 190 (229)
T COG1603 115 DHVLARLAAEKGVALEISLRPLLRSSGYRRARLLSFLRSLLRLARKYDVPIVVTSDAESPLELRSPRDVISLAKVL---- 190 (229)
T ss_pred cHHHHHHHHhcCceEEEehHHhhccchhHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCChhhhcChhhHHHHHHHh----
Confidence 4456788888988877665544332111 23334456699999999986442222333333333322
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 356 EVFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 356 ~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
|++..+|-.+++..|..+|.
T Consensus 191 -----------G~e~~ea~~~~~~~p~~iL~ 210 (229)
T COG1603 191 -----------GLEDDEAKKSLSEYPRLILR 210 (229)
T ss_pred -----------CCCHHHHHHHHHHhHHHHHH
Confidence 59999999999999999996
No 165
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=63.22 E-value=1.3e+02 Score=28.06 Aligned_cols=93 Identities=17% Similarity=0.185 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEE---------eecCChhhHHHH
Q 012333 224 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH---------TVWVNHTEIGLL 293 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H---------~~~~~~~~~~~~ 293 (466)
.-+++++...+.|+.+.+ |+.+. ...+.++......+.+| ...+++++++.+
T Consensus 155 ~G~~vv~~mn~lGmiiDvSH~s~~------------------~~~dv~~~s~~PviaSHsn~ral~~h~RNltD~~i~~i 216 (309)
T cd01301 155 FGKELVREMNRLGIIIDLSHLSER------------------TFWDVLDISNAPVIASHSNARALCDHPRNLTDAQLKAI 216 (309)
T ss_pred HHHHHHHHHHHcCCEEEcCCCCHH------------------HHHHHHHhcCCCEEEeccChHHhcCCCCCCCHHHHHHH
Confidence 446778888888988865 66432 12222222334455555 445889999999
Q ss_pred HhcCCeEEECccchhhc-cCCccH-------HHHHH-cCC-cEEEccCCCC
Q 012333 294 SRAGVKVSHCPASAMRM-LGFAPI-------KEMLH-ADI-CVSLGTDGAP 334 (466)
Q Consensus 294 ~~~g~~~~~~p~~~~~~-~~~~~~-------~~~~~-~gi-~~~~gsD~~~ 334 (466)
++.|..+-++....+-. .....+ ..+.+ .|+ .+++|||...
T Consensus 217 a~~GGvigi~~~~~fl~~~~~~~~~~~~~hi~~i~~l~G~dhVgiGsDfdg 267 (309)
T cd01301 217 AETGGVIGVNFYPAFLSPGADATLDDVVRHIDYIVDLIGIDHVGLGSDFDG 267 (309)
T ss_pred HHcCCEEEEeeeHHHhCCCCCCCHHHHHHHHHHHHHhcCCCeEEECcccCC
Confidence 99988776665443321 111222 22222 254 4999999753
No 166
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=60.15 E-value=99 Score=26.81 Aligned_cols=89 Identities=11% Similarity=0.008 Sum_probs=58.4
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCe
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~ 299 (466)
.+.+...++.+.+.+.|+++.=-...++. ..+.+..+..--++..+.=|+-++.++.+.+.+.|..
T Consensus 17 ~~~e~a~~~~~al~~~Gi~~iEit~~t~~--------------a~~~i~~l~~~~~~~~vGAGTVl~~~~a~~a~~aGA~ 82 (204)
T TIGR01182 17 DDVDDALPLAKALIEGGLRVLEVTLRTPV--------------ALDAIRLLRKEVPDALIGAGTVLNPEQLRQAVDAGAQ 82 (204)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcc--------------HHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHcCCC
Confidence 46677788888888888885432222221 2222222221113467888999999999999999999
Q ss_pred EEECccchhhccCCccHHHHHHcCCcEE
Q 012333 300 VSHCPASAMRMLGFAPIKEMLHADICVS 327 (466)
Q Consensus 300 ~~~~p~~~~~~~~~~~~~~~~~~gi~~~ 327 (466)
+.+.|..+... +....+.|++..
T Consensus 83 FivsP~~~~~v-----~~~~~~~~i~~i 105 (204)
T TIGR01182 83 FIVSPGLTPEL-----AKHAQDHGIPII 105 (204)
T ss_pred EEECCCCCHHH-----HHHHHHcCCcEE
Confidence 99999876432 445566676654
No 167
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=56.74 E-value=1.2e+02 Score=26.17 Aligned_cols=89 Identities=7% Similarity=0.024 Sum_probs=58.5
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCe
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~ 299 (466)
.+.+...++.+.+.+.|+++.=-...++. ..+.+..+..--++..+.=|+-++.++.+.+.+.|..
T Consensus 13 ~~~~~a~~ia~al~~gGi~~iEit~~tp~--------------a~~~I~~l~~~~~~~~vGAGTVl~~e~a~~ai~aGA~ 78 (201)
T PRK06015 13 DDVEHAVPLARALAAGGLPAIEITLRTPA--------------ALDAIRAVAAEVEEAIVGAGTILNAKQFEDAAKAGSR 78 (201)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCcc--------------HHHHHHHHHHHCCCCEEeeEeCcCHHHHHHHHHcCCC
Confidence 46677788888888888885422222222 2222222221113467888999999999999999999
Q ss_pred EEECccchhhccCCccHHHHHHcCCcEE
Q 012333 300 VSHCPASAMRMLGFAPIKEMLHADICVS 327 (466)
Q Consensus 300 ~~~~p~~~~~~~~~~~~~~~~~~gi~~~ 327 (466)
+.++|..+... ++...+.|++..
T Consensus 79 FivSP~~~~~v-----i~~a~~~~i~~i 101 (201)
T PRK06015 79 FIVSPGTTQEL-----LAAANDSDVPLL 101 (201)
T ss_pred EEECCCCCHHH-----HHHHHHcCCCEe
Confidence 99999877432 445566666654
No 168
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=56.25 E-value=1.2e+02 Score=29.13 Aligned_cols=102 Identities=14% Similarity=0.075 Sum_probs=56.9
Q ss_pred HHHHHHhcCceeeeecCc----cCHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCC
Q 012333 130 CGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (466)
Q Consensus 130 ~~~~~~~~GvTtv~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (466)
+...+..+|++.++.+.. .++....++.+..|.+.....++-. + ....++...++.+++.+.+-
T Consensus 103 Fv~ka~~nGidvfRiFDAlND~RNl~~ai~a~kk~G~h~q~~i~YT~-s-----------PvHt~e~yv~~akel~~~g~ 170 (472)
T COG5016 103 FVEKAAENGIDVFRIFDALNDVRNLKTAIKAAKKHGAHVQGTISYTT-S-----------PVHTLEYYVELAKELLEMGV 170 (472)
T ss_pred HHHHHHhcCCcEEEechhccchhHHHHHHHHHHhcCceeEEEEEecc-C-----------CcccHHHHHHHHHHHHHcCC
Confidence 456788999999877643 3344556677778887654443322 1 11233444556666665554
Q ss_pred CCeEEEEeecccccCCHHHHHHHHHHHH-HcCCccceeccCC
Q 012333 206 GRIRIWFGIRQIMNATDRLLLETRDMAR-EFKTGIHMHVAEI 246 (466)
Q Consensus 206 ~~i~~~~~~~~~~~~~~~~l~~~~~~a~-~~~~~v~~H~~~~ 246 (466)
+.+.+ -...+. .++...-+++...+ ..++++.+|+...
T Consensus 171 DSIci-KDmaGl--ltP~~ayelVk~iK~~~~~pv~lHtH~T 209 (472)
T COG5016 171 DSICI-KDMAGL--LTPYEAYELVKAIKKELPVPVELHTHAT 209 (472)
T ss_pred CEEEe-eccccc--CChHHHHHHHHHHHHhcCCeeEEecccc
Confidence 44432 222222 34555556665554 4478877776543
No 169
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=53.58 E-value=87 Score=28.30 Aligned_cols=93 Identities=6% Similarity=-0.070 Sum_probs=51.7
Q ss_pred HHHHHHhccCCCCCeEEEEee--cccccCCH-HH---HHHHHHHHHHc-CCccceeccCCcchhHHHHhhcCCCCchHHH
Q 012333 194 KELYAKHHHAADGRIRIWFGI--RQIMNATD-RL---LLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTF 266 (466)
Q Consensus 194 ~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~-~~---l~~~~~~a~~~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~ 266 (466)
.+..+++.+.|...+++.... ++....++ ++ +..+++.+++. ++++.+|...... +
T Consensus 26 ~~~a~~~~~~GA~iIDIG~~st~p~~~~i~~~~E~~rl~~~v~~~~~~~~~plsiDT~~~~v-----------------i 88 (257)
T TIGR01496 26 VAHAERMLEEGADIIDVGGESTRPGADRVSPEEELNRVVPVIKALRDQPDVPISVDTYRAEV-----------------A 88 (257)
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEeCCCHHH-----------------H
Confidence 344444556666777752111 11122233 34 56667777776 9999998765321 1
Q ss_pred HhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCeEEECcc
Q 012333 267 LDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKVSHCPA 305 (466)
Q Consensus 267 ~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~~~~~p~ 305 (466)
...++. ...++.|.... .++.++.+++.|+.++..+.
T Consensus 89 ~~al~~--G~~iINsis~~~~~~~~~l~~~~~~~vV~m~~ 126 (257)
T TIGR01496 89 RAALEA--GADIINDVSGGQDPAMLEVAAEYGVPLVLMHM 126 (257)
T ss_pred HHHHHc--CCCEEEECCCCCCchhHHHHHHcCCcEEEEeC
Confidence 111111 23456676665 56678888888888776543
No 170
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=47.31 E-value=74 Score=24.96 Aligned_cols=80 Identities=18% Similarity=0.109 Sum_probs=44.6
Q ss_pred CeEEeCCCcEEeecccccccCCcccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc
Q 012333 68 DQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG 147 (466)
Q Consensus 68 ~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~ 147 (466)
+-++|+ ...+.|=+||.|.|.....+..... .+..+. -.|......+..+-..|||.+...-+
T Consensus 7 ~~~fdl-dytiwP~~vdthl~~pfkP~k~~~g-----------~~g~e~-----~fY~Di~rIL~dLk~~GVtl~~ASRt 69 (144)
T KOG4549|consen 7 AMQFDL-DYTIWPRLVDTHLDYPFKPFKCECG-----------SKGEEM-----IFYDDIRRILVDLKKLGVTLIHASRT 69 (144)
T ss_pred eeEEec-cceeeeEEEEecccccccccccCcc-----------cCccee-----eeccchhHHHHHHHhcCcEEEEecCC
Confidence 356776 4589999999999985422221000 000011 11222333445677899998877655
Q ss_pred cCHHHHHHHHHHhCCeE
Q 012333 148 QHVSEMAKAVELLGLRA 164 (466)
Q Consensus 148 ~~~~~~~~~~~~~g~~~ 164 (466)
.......+.+....+..
T Consensus 70 ~ap~iA~q~L~~fkvk~ 86 (144)
T KOG4549|consen 70 MAPQIASQGLETFKVKQ 86 (144)
T ss_pred CCHHHHHHHHHHhccCc
Confidence 66555555555544433
No 171
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=47.18 E-value=2e+02 Score=25.19 Aligned_cols=90 Identities=10% Similarity=-0.009 Sum_probs=59.8
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhc-cCC--CCeeEEEeecCChhhHHHHHhc
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE-FLQ--NNLLSAHTVWVNHTEIGLLSRA 296 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~H~~~~~~~~~~~~~~~ 296 (466)
.+.+....+.+.+.+.|+++.=-...++. ..+.+..+. ... ++.++.=|+-++.++.+.+.+.
T Consensus 22 ~~~~~a~~~~~al~~~Gi~~iEit~~~~~--------------a~~~i~~l~~~~~~~p~~~vGaGTV~~~~~~~~a~~a 87 (213)
T PRK06552 22 ESKEEALKISLAVIKGGIKAIEVTYTNPF--------------ASEVIKELVELYKDDPEVLIGAGTVLDAVTARLAILA 87 (213)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCcc--------------HHHHHHHHHHHcCCCCCeEEeeeeCCCHHHHHHHHHc
Confidence 46677888888888989885432222221 233333332 122 2477888999999999999999
Q ss_pred CCeEEECccchhhccCCccHHHHHHcCCcEEE
Q 012333 297 GVKVSHCPASAMRMLGFAPIKEMLHADICVSL 328 (466)
Q Consensus 297 g~~~~~~p~~~~~~~~~~~~~~~~~~gi~~~~ 328 (466)
|..+.+.|..+... ++...+.|++..-
T Consensus 88 GA~FivsP~~~~~v-----~~~~~~~~i~~iP 114 (213)
T PRK06552 88 GAQFIVSPSFNRET-----AKICNLYQIPYLP 114 (213)
T ss_pred CCCEEECCCCCHHH-----HHHHHHcCCCEEC
Confidence 99999999877432 4445566666553
No 172
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=43.99 E-value=1.6e+02 Score=25.61 Aligned_cols=89 Identities=11% Similarity=-0.062 Sum_probs=57.1
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCe
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~ 299 (466)
.+.++-..+.+..-+.|++..=-...++. ..+.+..+...-++.++.-|+.+++++++.+.+.|..
T Consensus 22 ~~~e~a~~~a~Ali~gGi~~IEITl~sp~--------------a~e~I~~l~~~~p~~lIGAGTVL~~~q~~~a~~aGa~ 87 (211)
T COG0800 22 DDVEEALPLAKALIEGGIPAIEITLRTPA--------------ALEAIRALAKEFPEALIGAGTVLNPEQARQAIAAGAQ 87 (211)
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEecCCCC--------------HHHHHHHHHHhCcccEEccccccCHHHHHHHHHcCCC
Confidence 34555566666666777774322222221 2232233322223677888999999999999999999
Q ss_pred EEECccchhhccCCccHHHHHHcCCcEE
Q 012333 300 VSHCPASAMRMLGFAPIKEMLHADICVS 327 (466)
Q Consensus 300 ~~~~p~~~~~~~~~~~~~~~~~~gi~~~ 327 (466)
+.++|..+-.. ++...+.|++++
T Consensus 88 fiVsP~~~~ev-----~~~a~~~~ip~~ 110 (211)
T COG0800 88 FIVSPGLNPEV-----AKAANRYGIPYI 110 (211)
T ss_pred EEECCCCCHHH-----HHHHHhCCCccc
Confidence 99999877543 556667777654
No 173
>PF01244 Peptidase_M19: Membrane dipeptidase (Peptidase family M19); InterPro: IPR008257 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of peptidases belong to the MEROPS peptidase family M19 (membrane dipeptidase family, clan MJ). The protein fold of the peptidase domain for members of this family resembles that of Klebsiella urease, the type example for clan MJ. Renal dipeptidase (rDP) (3.4.13.19 from EC), also known as microsomal dipeptidase, is a zinc-dependent metalloenzyme that hydrolyzes a wide range of dipeptides. It is involved in renal metabolism of glutathione and its conjugates. It is a homodimeric disulphide-linked glycoprotein attached to the renal brush border microvilli membrane by a GPI-anchor. A glutamate residue has recently been shown [,] to be important for the catalytic activity of rDP. rDP seems to be evolutionary related to hypothetical proteins in the PQQ biosynthesis operons of Acinetobacter calcoaceticus and Klebsiella pneumoniae.; GO: 0008235 metalloexopeptidase activity, 0008239 dipeptidyl-peptidase activity, 0016805 dipeptidase activity, 0006508 proteolysis; PDB: 3NEH_B 2RAG_D 3LU2_A 3B40_A 3LY0_A 3FDG_B 2I5G_B 3S2J_A 3S2N_A 3S2L_A ....
Probab=43.15 E-value=1.9e+02 Score=27.22 Aligned_cols=90 Identities=17% Similarity=0.203 Sum_probs=44.6
Q ss_pred HHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCee---------EEEeecCChhhHHHHHh
Q 012333 226 LETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLL---------SAHTVWVNHTEIGLLSR 295 (466)
Q Consensus 226 ~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~H~~~~~~~~~~~~~~ 295 (466)
+++++...+.|+.+.+ |+.+.. ..+.++......+ ..|-..+++++++.+++
T Consensus 163 ~~vV~~mn~lGm~vDvSH~s~~t------------------~~Dv~~~s~~PviaSHSn~ral~~h~RNltDe~iraia~ 224 (320)
T PF01244_consen 163 REVVREMNRLGMLVDVSHLSEKT------------------FWDVLEISKKPVIASHSNARALCPHPRNLTDEQIRAIAE 224 (320)
T ss_dssp HHHHHHHHHHT-EEE-TTB-HHH------------------HHHHHHH-SSEEEECCEEBTTTS--TTSB-HHHHHHHHH
T ss_pred HHHHHHHHHcCCeeeeccCCHHH------------------HHHHHhhcCCCEEEeccChHhhCCCCCCCCHHHHHHHHH
Confidence 6677778888888755 654321 1122222222233 34556688999999999
Q ss_pred cCCeEEECccchhhcc---CCccHHHH-------HHc-CC-cEEEccCCC
Q 012333 296 AGVKVSHCPASAMRML---GFAPIKEM-------LHA-DI-CVSLGTDGA 333 (466)
Q Consensus 296 ~g~~~~~~p~~~~~~~---~~~~~~~~-------~~~-gi-~~~~gsD~~ 333 (466)
.|-.+-++....+-.. ....+..+ .+. |+ .|++|||.-
T Consensus 225 ~GGviGi~~~~~fl~~~~~~~~~~~~~~~Hi~y~~~l~G~dhVgiGsDfd 274 (320)
T PF01244_consen 225 RGGVIGINFYPAFLGDDWDPRASLDDLVDHIDYIVDLVGIDHVGIGSDFD 274 (320)
T ss_dssp TT-EEEEESSHHHHSTTHSSG-BHHHHHHHHHHHHHHH-GGGEEEE--BT
T ss_pred CCcEEEEEcchhhhcccccccccHHHHHHHHHHHHHhcCCCeEEECcccC
Confidence 9877766655433211 22333332 222 43 599999974
No 174
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=42.99 E-value=2.8e+02 Score=25.85 Aligned_cols=96 Identities=17% Similarity=0.153 Sum_probs=52.6
Q ss_pred HHHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCchHHHHhhhc------cCCCCeeEEEeecCChhhHHHHHhcC
Q 012333 225 LLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIE------FLQNNLLSAHTVWVNHTEIGLLSRAG 297 (466)
Q Consensus 225 l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~H~~~~~~~~~~~~~~~g 297 (466)
=+++++.+.++|+.+.. |+.+.... ++++..+ -.+.+.+..|-..+++++++.+++.|
T Consensus 151 Gk~lV~~~N~LgIiiDlSH~s~kt~~---------------Dvl~~s~~PviaSHSN~~al~~h~RNl~D~qlkaI~~~g 215 (313)
T COG2355 151 GKELVREMNELGIIIDLSHLSDKTFW---------------DVLDLSKAPVVASHSNARALVDHPRNLSDEQLKAIAETG 215 (313)
T ss_pred HHHHHHHHHhcCCEEEecccCCccHH---------------HHHhccCCceEEecCCchhccCCCCCCCHHHHHHHHhcC
Confidence 36778889999998854 77553221 1111111 01123345566778899999999998
Q ss_pred CeEEECccchhhc---cCCccHH-------HHHHc-CC-cEEEccCCCCC
Q 012333 298 VKVSHCPASAMRM---LGFAPIK-------EMLHA-DI-CVSLGTDGAPS 335 (466)
Q Consensus 298 ~~~~~~p~~~~~~---~~~~~~~-------~~~~~-gi-~~~~gsD~~~~ 335 (466)
-.+-+.-...+-. ...+.+. .+.+. |+ .|++|||+-..
T Consensus 216 GvIgv~~~~~fl~~~~~~~atldd~v~hI~h~v~~~G~dhVglGsDf~g~ 265 (313)
T COG2355 216 GVIGVNFIPAFLRPGGAARATLDDLVRHIDHFVELVGIDHVGLGSDFDGG 265 (313)
T ss_pred CEEEEEeehhhccCCCCCCCCHHHHHHHHHHHHHhcCcceeEecccccCC
Confidence 6654332222111 0122222 23333 43 48999998543
No 175
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=42.96 E-value=2.2e+02 Score=24.64 Aligned_cols=87 Identities=9% Similarity=0.052 Sum_probs=53.0
Q ss_pred CChhhHHHHHhcCCeEEECccchhhccCCc----------cHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcc
Q 012333 285 VNHTEIGLLSRAGVKVSHCPASAMRMLGFA----------PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKG 354 (466)
Q Consensus 285 ~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~----------~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~ 354 (466)
++.-..+.+++.++.+.++-....+..+.. .+.-..+.++|+.++|+......--.+-+-+..+..+
T Consensus 118 ~dHVLAKlAa~n~VAIe~~L~plL~~~G~~Rar~L~~~r~~l~L~rKYd~P~VISS~A~s~~~lRsPRdl~aL~~~i--- 194 (216)
T PRK03892 118 IDHVLARMAAKRGVAIGFSLSPLLRANPYERANILRFMMKAWQLVNKYKVPRFITSSAESKWEVRGPRDLMSLGINI--- 194 (216)
T ss_pred ccHHHHHHHHHcCeEEEEecHHHHhhCchhHHHHHHHHHHHHHHHHHcCCCEEEecCcchhccCCCHHHHHHHHHHh---
Confidence 344556788888998887766554432221 1222346699999999976442111122222222222
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 355 REVFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 355 ~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
|++.+++...+|.+|-.++.
T Consensus 195 ------------Gme~~ea~~~Ls~~p~~i~~ 214 (216)
T PRK03892 195 ------------GMEIPQAKASLSFYPRIILK 214 (216)
T ss_pred ------------CCCHHHHHHHHHHhHHHHhh
Confidence 59999999999999987753
No 176
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=38.43 E-value=2.6e+02 Score=28.91 Aligned_cols=102 Identities=15% Similarity=0.027 Sum_probs=56.4
Q ss_pred HHHHHHhcCceeeeecCcc----CHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCC
Q 012333 130 CGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (466)
Q Consensus 130 ~~~~~~~~GvTtv~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (466)
..+.+..+|+..++.+..- +.....++.++.|.......++.. .+ . .+ .+...+..+++.+.+.
T Consensus 101 ~v~~a~~~Gidv~Rifd~lnd~~n~~~~i~~~k~~G~~~~~~i~yt~-sp----~----~t---~e~~~~~ak~l~~~Ga 168 (596)
T PRK14042 101 FVKLAVNNGVDVFRVFDALNDARNLKVAIDAIKSHKKHAQGAICYTT-SP----V----HT---LDNFLELGKKLAEMGC 168 (596)
T ss_pred HHHHHHHcCCCEEEEcccCcchHHHHHHHHHHHHcCCEEEEEEEecC-CC----C----CC---HHHHHHHHHHHHHcCC
Confidence 4566889999988776432 233446677778887665544432 11 1 12 2233344444444444
Q ss_pred CCeEEEEeecccccCCHHHHHHHHHHHHH-cCCccceeccCC
Q 012333 206 GRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEI 246 (466)
Q Consensus 206 ~~i~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~ 246 (466)
..+.+ -. ..-..++....+++...++ .++++++|+.++
T Consensus 169 d~I~I-kD--taG~l~P~~v~~lv~alk~~~~ipi~~H~Hnt 207 (596)
T PRK14042 169 DSIAI-KD--MAGLLTPTVTVELYAGLKQATGLPVHLHSHST 207 (596)
T ss_pred CEEEe-CC--cccCCCHHHHHHHHHHHHhhcCCEEEEEeCCC
Confidence 43322 11 1123566677777766654 478888887654
No 177
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=37.17 E-value=1.1e+02 Score=26.44 Aligned_cols=88 Identities=10% Similarity=-0.019 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeE
Q 012333 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 300 (466)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~ 300 (466)
+.+...++.+.+.+.|+++.=-...++. ..+.+..+..--++.++.=|+-++.++++.+.+.|..+
T Consensus 18 ~~~~a~~~~~al~~gGi~~iEiT~~t~~--------------a~~~I~~l~~~~p~~~vGAGTV~~~e~a~~a~~aGA~F 83 (196)
T PF01081_consen 18 DPEDAVPIAEALIEGGIRAIEITLRTPN--------------ALEAIEALRKEFPDLLVGAGTVLTAEQAEAAIAAGAQF 83 (196)
T ss_dssp SGGGHHHHHHHHHHTT--EEEEETTSTT--------------HHHHHHHHHHHHTTSEEEEES--SHHHHHHHHHHT-SE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCcc--------------HHHHHHHHHHHCCCCeeEEEeccCHHHHHHHHHcCCCE
Confidence 4456677777778888875322222221 22222211111134678888999999999999999999
Q ss_pred EECccchhhccCCccHHHHHHcCCcEE
Q 012333 301 SHCPASAMRMLGFAPIKEMLHADICVS 327 (466)
Q Consensus 301 ~~~p~~~~~~~~~~~~~~~~~~gi~~~ 327 (466)
.++|..+... ++...+.+++..
T Consensus 84 ivSP~~~~~v-----~~~~~~~~i~~i 105 (196)
T PF01081_consen 84 IVSPGFDPEV-----IEYAREYGIPYI 105 (196)
T ss_dssp EEESS--HHH-----HHHHHHHTSEEE
T ss_pred EECCCCCHHH-----HHHHHHcCCccc
Confidence 9999877432 445556666654
No 178
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=36.96 E-value=3.1e+02 Score=27.36 Aligned_cols=102 Identities=13% Similarity=0.037 Sum_probs=56.1
Q ss_pred HHHHHhcCceeeeecCcc----CHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCC
Q 012333 131 GIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADG 206 (466)
Q Consensus 131 ~~~~~~~GvTtv~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (466)
.+.+..+|+..++.+..- +.....+..++.|.......++.. ++ ....+-..+..+++.+.+..
T Consensus 111 v~~a~~~Gidi~Rifd~lnd~~n~~~ai~~ak~~G~~~~~~i~yt~-----sp-------~~t~~y~~~~a~~l~~~Gad 178 (468)
T PRK12581 111 ISLSAQNGIDVFRIFDALNDPRNIQQALRAVKKTGKEAQLCIAYTT-----SP-------VHTLNYYLSLVKELVEMGAD 178 (468)
T ss_pred HHHHHHCCCCEEEEcccCCCHHHHHHHHHHHHHcCCEEEEEEEEEe-----CC-------cCcHHHHHHHHHHHHHcCCC
Confidence 566889999988775432 234445677778887654443332 11 11222233444444444444
Q ss_pred CeEEEEeecccccCCHHHHHHHHHHHHHc-CCccceeccCCc
Q 012333 207 RIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEIP 247 (466)
Q Consensus 207 ~i~~~~~~~~~~~~~~~~l~~~~~~a~~~-~~~v~~H~~~~~ 247 (466)
.+.+ . ...-..+++.+.+++...++. ++++.+|+.++.
T Consensus 179 ~I~I-k--DtaG~l~P~~v~~Lv~alk~~~~~pi~~H~Hnt~ 217 (468)
T PRK12581 179 SICI-K--DMAGILTPKAAKELVSGIKAMTNLPLIVHTHATS 217 (468)
T ss_pred EEEE-C--CCCCCcCHHHHHHHHHHHHhccCCeEEEEeCCCC
Confidence 3322 1 111235677777777766654 678888886643
No 179
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=34.56 E-value=3.1e+02 Score=23.80 Aligned_cols=92 Identities=14% Similarity=0.089 Sum_probs=59.8
Q ss_pred cCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhc-cCCCCeeEEEeecCChhhHHHHHhcC
Q 012333 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE-FLQNNLLSAHTVWVNHTEIGLLSRAG 297 (466)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~H~~~~~~~~~~~~~~~g 297 (466)
..+.+...++++.+.+.|+++.=-...++. ..+.+..+. ....+..+.=|+.++.++++.+.+.|
T Consensus 18 ~~~~~~~~~~~~a~~~gGi~~iEvt~~~~~--------------~~~~i~~l~~~~~~~~~iGaGTV~~~~~~~~a~~aG 83 (206)
T PRK09140 18 GITPDEALAHVGALIEAGFRAIEIPLNSPD--------------PFDSIAALVKALGDRALIGAGTVLSPEQVDRLADAG 83 (206)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeCCCcc--------------HHHHHHHHHHHcCCCcEEeEEecCCHHHHHHHHHcC
Confidence 346778888899899989875322222221 122222221 12234667888899999999999999
Q ss_pred CeEEECccchhhccCCccHHHHHHcCCcEEEc
Q 012333 298 VKVSHCPASAMRMLGFAPIKEMLHADICVSLG 329 (466)
Q Consensus 298 ~~~~~~p~~~~~~~~~~~~~~~~~~gi~~~~g 329 (466)
....+.|..+... .+.....|+.+..|
T Consensus 84 A~fivsp~~~~~v-----~~~~~~~~~~~~~G 110 (206)
T PRK09140 84 GRLIVTPNTDPEV-----IRRAVALGMVVMPG 110 (206)
T ss_pred CCEEECCCCCHHH-----HHHHHHCCCcEEcc
Confidence 9999999877432 34455566666655
No 180
>PF04571 Lipin_N: lipin, N-terminal conserved region; InterPro: IPR007651 Mutations in the lipin gene lead to fatty liver dystrophy in mice. The protein has been shown to be phosphorylated by the TOR Ser/Thr protein kinases in response to insulin stimulation. This entry represents a conserved domain found at the N terminus of the member proteins [, ].
Probab=33.80 E-value=62 Score=24.66 Aligned_cols=42 Identities=33% Similarity=0.370 Sum_probs=29.6
Q ss_pred cCEEEEcCC--CCCCCCcCCcccceecccCCCCeeEEEEccEEE
Q 012333 400 ADMVVVDPF--SWPMVPVHDRITSLVYCMRTENVVSVMCNGQWV 441 (466)
Q Consensus 400 ADlvv~d~~--~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v 441 (466)
=|+||+... .+.-.|++-.+.++-.+-...++..+.|||+.+
T Consensus 28 iDVIVV~q~DGs~~sSPFhVRFGk~~vl~~~ek~V~I~VNG~~~ 71 (110)
T PF04571_consen 28 IDVIVVEQPDGSLKSSPFHVRFGKLGVLRPREKVVDIEVNGKPV 71 (110)
T ss_pred eeEEEEecCCCCEecCccEEEEcceeeecccCcEEEEEECCEEc
Confidence 488888765 455557766666654444567899999999987
No 181
>PF02811 PHP: PHP domain; InterPro: IPR004013 The PHP (Polymerase and Histidinol Phosphatase) domain is a putative phosphoesterase domain. This family is often associated with an N-terminal region IPR003141 from INTERPRO.; GO: 0003824 catalytic activity; PDB: 2WJE_A 3QY8_A 2WJD_A 2WJF_A 1PB0_B 1M68_A 1M65_A 3E38_B 2W9M_A 3E0F_A ....
Probab=33.32 E-value=1.5e+02 Score=24.33 Aligned_cols=39 Identities=10% Similarity=0.048 Sum_probs=25.4
Q ss_pred HHHHhcCceeeeec---CccCHHHHHHHHHHhCCeEEeeccc
Q 012333 132 IELIHSGVTCFAEA---GGQHVSEMAKAVELLGLRACLVQST 170 (466)
Q Consensus 132 ~~~~~~GvTtv~~~---~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (466)
+.+.+.|++++.-. .........+.....+++...+.-+
T Consensus 23 ~~A~~~Gl~~i~iTDH~~~~~~~~~~~~~~~~~i~vi~G~E~ 64 (175)
T PF02811_consen 23 EQAKEKGLDAIAITDHNNFAGYPDFYKEAKKKGIKVIPGVEI 64 (175)
T ss_dssp HHHHHTTESEEEEEEETTTTTHHHHHHHHHHTTSEEEEEEEE
T ss_pred HHHHHcCCCEEEEcCCcccccchHHHHHHHhcCCceEEeEee
Confidence 44788999876442 2234556666777788888776554
No 182
>cd01733 LSm10 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm10 is an SmD1-like protein which is thought to bind U7 snRNA along with LSm11 and five other Sm subunits to form a 7-member ring structure. LSm10 and the U7 snRNP of which it is a part are thought to play an important role in histone mRNA 3' processing.
Probab=32.05 E-value=1.4e+02 Score=21.23 Aligned_cols=35 Identities=11% Similarity=0.186 Sum_probs=21.3
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIG 54 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig 54 (466)
.+.+.+.|+.+++.++ ....-+.+.|++..|..|.
T Consensus 42 ~MNl~L~~~~~~~~~~--~~~~~~~v~IRG~nI~yI~ 76 (78)
T cd01733 42 FMNIRLAKVTIIDRNG--KQVQVEEIMVTGRNIRYVH 76 (78)
T ss_pred CceeEEEEEEEEcCCC--ceeECCcEEEECCEEEEEE
Confidence 3567777777664332 2223457778777777663
No 183
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=30.39 E-value=3.8e+02 Score=23.60 Aligned_cols=89 Identities=8% Similarity=-0.015 Sum_probs=58.5
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhh----hccCCCCeeEEEeecCChhhHHHHHh
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDK----IEFLQNNLLSAHTVWVNHTEIGLLSR 295 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~ 295 (466)
.+.+...++.+.+.+.|+++.=-...++. ..+.+.. +..-.++.++.=|+.++.++.+.+.+
T Consensus 24 ~~~~~a~~~~~al~~gGi~~iEiT~~tp~--------------a~~~i~~l~~~~~~~~p~~~vGaGTVl~~e~a~~a~~ 89 (222)
T PRK07114 24 ADVEVAKKVIKACYDGGARVFEFTNRGDF--------------AHEVFAELVKYAAKELPGMILGVGSIVDAATAALYIQ 89 (222)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCCc--------------HHHHHHHHHHHHHhhCCCeEEeeEeCcCHHHHHHHHH
Confidence 46677788888888889885422222221 2222222 11112346788899999999999999
Q ss_pred cCCeEEECccchhhccCCccHHHHHHcCCcEE
Q 012333 296 AGVKVSHCPASAMRMLGFAPIKEMLHADICVS 327 (466)
Q Consensus 296 ~g~~~~~~p~~~~~~~~~~~~~~~~~~gi~~~ 327 (466)
.|..+.++|..+-.. ++...+.|++..
T Consensus 90 aGA~FiVsP~~~~~v-----~~~~~~~~i~~i 116 (222)
T PRK07114 90 LGANFIVTPLFNPDI-----AKVCNRRKVPYS 116 (222)
T ss_pred cCCCEEECCCCCHHH-----HHHHHHcCCCEe
Confidence 999999999877432 455566666654
No 184
>cd01725 LSm2 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm2 is one of at least seven subunits that assemble onto U6 snRNA to form a seven-membered ring structure. Sm-like proteins exist in archaea as well as prokaryotes that form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=29.72 E-value=1.3e+02 Score=21.49 Aligned_cols=39 Identities=10% Similarity=0.157 Sum_probs=26.0
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCC
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQS 56 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~ 56 (466)
.+++.+.|+.+...++......-..+.|++..|..|.-.
T Consensus 34 ~MNi~L~n~~~~~~~~~~~~~~~~~v~IRG~~I~~I~lp 72 (81)
T cd01725 34 YLNIKLTNISVTDPEKYPHMLSVKNCFIRGSVVRYVQLP 72 (81)
T ss_pred CcccEEEEEEEEcCCCcccccccCeEEEECCEEEEEEeC
Confidence 467888888877543322222335889999999988754
No 185
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=29.41 E-value=4.2e+02 Score=23.84 Aligned_cols=112 Identities=10% Similarity=0.040 Sum_probs=57.5
Q ss_pred HHHHHHhcCceeeeecCc-----------cCHHHHHHHHHHhCCeEEeecccccCCCCCCcccc---cCChHHHHHHHHH
Q 012333 130 CGIELIHSGVTCFAEAGG-----------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWA---VRTTDDCIQSQKE 195 (466)
Q Consensus 130 ~~~~~~~~GvTtv~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 195 (466)
.+..+.+.|++.+--.+. .....+.+.....|+.......... +.+.... .....+.++..++
T Consensus 18 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~v~s~~~~~~---~~~~~~~~~~~~~r~~~~~~~~~ 94 (275)
T PRK09856 18 AFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETN---GYPYNMMLGDEHMRRESLDMIKL 94 (275)
T ss_pred HHHHHHHcCCCEEEEccCCccccccccCchHHHHHHHHHHHcCCeEEEecCccc---CcCccccCCCHHHHHHHHHHHHH
Confidence 345577889987754221 1234566677788987643221111 1111110 0112233444455
Q ss_pred HHHHhccCCCCCeEEEEeeccccc-------CCHHHHHHHHHHHHHcCCccceecc
Q 012333 196 LYAKHHHAADGRIRIWFGIRQIMN-------ATDRLLLETRDMAREFKTGIHMHVA 244 (466)
Q Consensus 196 ~~~~~~~~~~~~i~~~~~~~~~~~-------~~~~~l~~~~~~a~~~~~~v~~H~~ 244 (466)
.++.....+...+.+..+...... ...+.++++.+.|+++|+.+.++..
T Consensus 95 ~i~~a~~lGa~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~iE~~ 150 (275)
T PRK09856 95 AMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPL 150 (275)
T ss_pred HHHHHHHhCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 555555555555544322211111 1123478888999999999988864
No 186
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=28.98 E-value=3.9e+02 Score=23.31 Aligned_cols=90 Identities=10% Similarity=-0.042 Sum_probs=56.1
Q ss_pred cCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCC
Q 012333 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (466)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~ 298 (466)
..+.+...++.+.+.+.|+++.=-....+. ..+.+..+...-++..+.-++-+++++.+.+.+.|.
T Consensus 23 ~~~~~~a~~i~~al~~~Gi~~iEitl~~~~--------------~~~~I~~l~~~~p~~~IGAGTVl~~~~a~~a~~aGA 88 (212)
T PRK05718 23 INKLEDAVPLAKALVAGGLPVLEVTLRTPA--------------ALEAIRLIAKEVPEALIGAGTVLNPEQLAQAIEAGA 88 (212)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCcc--------------HHHHHHHHHHHCCCCEEEEeeccCHHHHHHHHHcCC
Confidence 346677778888888888874321112111 222223332112346678888899999999999999
Q ss_pred eEEECccchhhccCCccHHHHHHcCCcEE
Q 012333 299 KVSHCPASAMRMLGFAPIKEMLHADICVS 327 (466)
Q Consensus 299 ~~~~~p~~~~~~~~~~~~~~~~~~gi~~~ 327 (466)
.+.++|..+.. -++...+.+++..
T Consensus 89 ~FivsP~~~~~-----vi~~a~~~~i~~i 112 (212)
T PRK05718 89 QFIVSPGLTPP-----LLKAAQEGPIPLI 112 (212)
T ss_pred CEEECCCCCHH-----HHHHHHHcCCCEe
Confidence 99999987742 2444555555443
No 187
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=27.87 E-value=82 Score=18.85 Aligned_cols=15 Identities=13% Similarity=0.395 Sum_probs=12.5
Q ss_pred EEEEECCEEEEEcCC
Q 012333 42 GVFVVQDRIKAIGQS 56 (466)
Q Consensus 42 ~v~I~~G~I~~Ig~~ 56 (466)
.|.|.||+|+.|...
T Consensus 19 ~iiiqdG~vvQIe~~ 33 (38)
T PF10055_consen 19 TIIIQDGRVVQIEKT 33 (38)
T ss_pred EEEEECCEEEEEEhh
Confidence 667899999999764
No 188
>cd01721 Sm_D3 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. Sm subunit D3 heterodimerizes with subunit B and three such heterodimers form a hexameric ring structure with alternating B and D3 subunits. The D3 - B heterodimer also assembles into a heptameric ring containing D1, D2, E, F, and G subunits. Sm-like proteins exist in archaea as well as prokaryotes which form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=27.24 E-value=1.9e+02 Score=19.96 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=20.0
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIG 54 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig 54 (466)
+.+.+.|+.+...++ ....-+.+.|++..|..|-
T Consensus 34 MNl~L~~~~~~~~~g--~~~~~~~v~IRG~nI~~v~ 67 (70)
T cd01721 34 MNCQLKDVTVTARDG--RVSQLEQVYIRGSKIRFFI 67 (70)
T ss_pred ceeEEEEEEEECCCC--cEeEcCcEEEeCCEEEEEE
Confidence 456677776654333 2334457777777777663
No 189
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=26.96 E-value=5.7e+02 Score=24.53 Aligned_cols=119 Identities=9% Similarity=0.108 Sum_probs=67.0
Q ss_pred cccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHH--HhhcCCC---CchHHHHhhhccCCCCeeEEEeecCChhhHH
Q 012333 217 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV--MDTRKVD---HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIG 291 (466)
Q Consensus 217 ~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~ 291 (466)
+.....+.+..+.+.+++.|+++.+-..+........ ....-++ -.....+...+..+..+++.-|...+.+++.
T Consensus 163 f~g~~~e~l~~L~~~~~~~Gl~~~t~v~d~~~~~~l~~~vd~lkI~s~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~ 242 (360)
T PRK12595 163 FQGLGVEGLKILKQVADEYGLAVISEIVNPADVEVALDYVDVIQIGARNMQNFELLKAAGRVNKPVLLKRGLSATIEEFI 242 (360)
T ss_pred ccCCCHHHHHHHHHHHHHcCCCEEEeeCCHHHHHHHHHhCCeEEECcccccCHHHHHHHHccCCcEEEeCCCCCCHHHHH
Confidence 4456678889999999999999877554433222111 1111111 1224566777777777888888877777765
Q ss_pred HHH----hcCC-eEEECccc-h------hhccCCccHHHHHH-cCCcEEEccCCCCC
Q 012333 292 LLS----RAGV-KVSHCPAS-A------MRMLGFAPIKEMLH-ADICVSLGTDGAPS 335 (466)
Q Consensus 292 ~~~----~~g~-~~~~~p~~-~------~~~~~~~~~~~~~~-~gi~~~~gsD~~~~ 335 (466)
.+. ..|. .+.+|-.. . ........+..+.+ .+++|.+.+||..+
T Consensus 243 ~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 243 YAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred HHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 443 3343 35544311 1 01012223334444 57888888888643
No 190
>COG2131 ComEB Deoxycytidylate deaminase [Nucleotide transport and metabolism]
Probab=26.79 E-value=2.3e+02 Score=23.48 Aligned_cols=21 Identities=33% Similarity=0.403 Sum_probs=17.7
Q ss_pred eceEEEEECCEEEEEcCCchh
Q 012333 39 RNGGVFVVQDRIKAIGQSADI 59 (466)
Q Consensus 39 ~~~~v~I~~G~I~~Ig~~~~~ 59 (466)
..+.+.++||+|.+.|-++.+
T Consensus 29 ~VGAvIvkd~rIiatGYNG~p 49 (164)
T COG2131 29 QVGAVIVKDGRIIATGYNGAP 49 (164)
T ss_pred ceeEEEEeCCeEEEeecCCCC
Confidence 457999999999999987653
No 191
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=24.71 E-value=1.3e+02 Score=32.13 Aligned_cols=161 Identities=13% Similarity=0.179 Sum_probs=88.2
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchH---H-HHhhhc-------cCCCCeeEEEeecC---
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV---T-FLDKIE-------FLQNNLLSAHTVWV--- 285 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~-------~~~~~~~~~H~~~~--- 285 (466)
.+......++..|+..|..+.+-....+..........++-.... + ..+..+ .-..+....||..+
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~ 669 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDM 669 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccccc
Confidence 334455667888999999887765554443333332222111111 1 111111 11235577888775
Q ss_pred ChhhHHHHHhcCCeEE---ECccchhhccCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCC
Q 012333 286 NHTEIGLLSRAGVKVS---HCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT 362 (466)
Q Consensus 286 ~~~~~~~~~~~g~~~~---~~p~~~~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (466)
+.++++.+.+....++ +.|..-. .-+....+.|..|++.-|+-.-
T Consensus 670 ~~~qld~il~nh~eIVFARTSPqQKL-----iIVe~cQr~GaiVaVTGDGVND--------------------------- 717 (1019)
T KOG0203|consen 670 SSEQLDELLQNHQEIVFARTSPQQKL-----IIVEGCQRQGAIVAVTGDGVND--------------------------- 717 (1019)
T ss_pred CHHHHHHHHHhCCceEEEecCccceE-----EeEhhhhhcCcEEEEeCCCcCC---------------------------
Confidence 5688888777655444 3333221 2344556778888887675321
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEE
Q 012333 363 TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 442 (466)
Q Consensus 363 ~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 442 (466)
.-|++.+-..- ++|+ -|+=--=..||++++|.| + ..|...+=.|++++
T Consensus 718 --------sPALKKADIGV--AMGi---aGSDvsKqAADmILLDDN----------F---------ASIVtGVEEGRLiF 765 (1019)
T KOG0203|consen 718 --------SPALKKADIGV--AMGI---AGSDVSKQAADMILLDDN----------F---------ASIVTGVEEGRLIF 765 (1019)
T ss_pred --------Chhhcccccce--eecc---ccchHHHhhcceEEecCc----------c---------hhheeecccceehh
Confidence 11222222222 2344 255555567999999998 1 35666677788877
Q ss_pred EC
Q 012333 443 KN 444 (466)
Q Consensus 443 ~~ 444 (466)
+|
T Consensus 766 DN 767 (1019)
T KOG0203|consen 766 DN 767 (1019)
T ss_pred hh
Confidence 75
No 192
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo. It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A.
Probab=24.42 E-value=41 Score=24.18 Aligned_cols=14 Identities=36% Similarity=0.496 Sum_probs=9.2
Q ss_pred ccCCccCEEEEcCC
Q 012333 395 EAGKKADMVVVDPF 408 (466)
Q Consensus 395 ~~G~~ADlvv~d~~ 408 (466)
.-|+.+||+|.|.+
T Consensus 21 ~sgq~~D~~v~d~~ 34 (82)
T PF12690_consen 21 PSGQRYDFVVKDKE 34 (82)
T ss_dssp SSS--EEEEEE-TT
T ss_pred CCCCEEEEEEECCC
Confidence 56899999999776
No 193
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=24.13 E-value=7.5e+02 Score=24.96 Aligned_cols=102 Identities=14% Similarity=0.046 Sum_probs=55.0
Q ss_pred HHHHHHhcCceeeeecCccC----HHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCC
Q 012333 130 CGIELIHSGVTCFAEAGGQH----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (466)
Q Consensus 130 ~~~~~~~~GvTtv~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (466)
..+.+..+|+..++.+..-+ .....++.+..|.+.....++.. + +. . ..+...+..+++.+.+.
T Consensus 102 fv~~a~~~Gidi~RIfd~lndv~nl~~ai~~vk~ag~~~~~~i~yt~-s----p~----~---t~e~~~~~a~~l~~~Ga 169 (499)
T PRK12330 102 FVEKSAENGMDVFRVFDALNDPRNLEHAMKAVKKVGKHAQGTICYTV-S----PI----H---TVEGFVEQAKRLLDMGA 169 (499)
T ss_pred HHHHHHHcCCCEEEEEecCChHHHHHHHHHHHHHhCCeEEEEEEEec-C----CC----C---CHHHHHHHHHHHHHcCC
Confidence 45668889998876653322 33445566777776533333321 1 10 1 22333444555555544
Q ss_pred CCeEEEEeecccccCCHHHHHHHHHHHHHc---CCccceeccCC
Q 012333 206 GRIRIWFGIRQIMNATDRLLLETRDMAREF---KTGIHMHVAEI 246 (466)
Q Consensus 206 ~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~---~~~v~~H~~~~ 246 (466)
..+.+ -. ..-..+++...+++...++. ++++.+|+.++
T Consensus 170 d~I~I-kD--taGll~P~~~~~LV~~Lk~~~~~~ipI~~H~Hnt 210 (499)
T PRK12330 170 DSICI-KD--MAALLKPQPAYDIVKGIKEACGEDTRINLHCHST 210 (499)
T ss_pred CEEEe-CC--CccCCCHHHHHHHHHHHHHhCCCCCeEEEEeCCC
Confidence 43332 11 11235677777777776654 58888887654
No 194
>TIGR03221 muco_delta muconolactone delta-isomerase. Members of this protein family are muconolactone delta-isomerase (EC 5.3.3.4), the CatC protein of the ortho cleavage pathway for metabolizing aromatic compounds by way of catechol.
Probab=24.00 E-value=1.2e+02 Score=22.26 Aligned_cols=43 Identities=23% Similarity=0.268 Sum_probs=32.9
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCccccc-----ccCCccCEEEEcCC
Q 012333 365 PAALPAETVLRMATINGAKSVLWDNDIGSL-----EAGKKADMVVVDPF 408 (466)
Q Consensus 365 ~~~ls~~~al~~~T~~~A~~lgl~~~~G~i-----~~G~~ADlvv~d~~ 408 (466)
+.+++.+++-+.-....|....+. +.|.+ -+|..+++-|||.+
T Consensus 11 P~~~~~~~~~~i~a~Eka~a~eLq-~~Gk~~~lWRv~G~~~n~sifdv~ 58 (90)
T TIGR03221 11 PVDMPAEKAAAIKAREKAYAQELQ-REGKWRHLWRVAGEYANYSIFDVE 58 (90)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH-hCCceEEEEEecCCceeEEEEEcC
Confidence 446888888888877777777663 34554 39999999999987
No 195
>KOG1096 consensus Adenosine monophosphate deaminase [Nucleotide transport and metabolism]
Probab=23.82 E-value=1.9e+02 Score=29.78 Aligned_cols=56 Identities=21% Similarity=0.304 Sum_probs=39.0
Q ss_pred EEEeecCChhh-HHHHH-hcCCeEEECccchhhc---cCCccHHHHHHcCCcEEEccCCCC
Q 012333 279 SAHTVWVNHTE-IGLLS-RAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAP 334 (466)
Q Consensus 279 ~~H~~~~~~~~-~~~~~-~~g~~~~~~p~~~~~~---~~~~~~~~~~~~gi~~~~gsD~~~ 334 (466)
|.||..+...- +..+. =..+.+.+.|.++..+ =..-|+..++..|..|.++||.+.
T Consensus 612 Ishg~Llrk~PvLQYLyYL~QIpIamSPLSnnslfl~Y~kNPf~~~f~~GL~VSLSTddpL 672 (768)
T KOG1096|consen 612 ISHGILLRKVPVLQYLYYLAQIPIAMSPLSNNSLFLSYHKNPFPEYFKRGLNVSLSTDDPL 672 (768)
T ss_pred ccchhhhccchHHHHHHHHHhcchhhccccccccccccccCchHHHHHhhceeeeccCCch
Confidence 77877765322 22222 1257778888888665 134589999999999999999874
No 196
>cd01724 Sm_D1 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. Sm subunit D1 heterodimerizes with subunit D2 and three such heterodimers form a hexameric ring structure with alternating D1 and D2 subunits. The D1 - D2 heterodimer also assembles into a heptameric ring containing DB, D3, E, F, and G subunits. Sm-like proteins exist in archaea as well as prokaryotes which form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=23.49 E-value=2.3e+02 Score=20.74 Aligned_cols=35 Identities=9% Similarity=-0.018 Sum_probs=19.4
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcC
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ 55 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~ 55 (466)
+.+.+.|+.+...+ +....-+.+.|++..|..|.=
T Consensus 35 MNl~L~~a~~~~~~--~~~~~~~~v~IRG~nI~yi~l 69 (90)
T cd01724 35 MNTHLKNVKLTLKG--RNPVPLDTLSIRGNNIRYFIL 69 (90)
T ss_pred eeEEEEEEEEEcCC--CceeEcceEEEeCCEEEEEEc
Confidence 45666666655322 223334566777766666653
No 197
>cd01723 LSm4 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm4 is one of at least seven subunits that assemble onto U6 snRNA to form a seven-membered ring structure. Sm-like proteins exist in archaea as well as prokaryotes that form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=22.82 E-value=1.9e+02 Score=20.28 Aligned_cols=37 Identities=11% Similarity=0.246 Sum_probs=24.9
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcC
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ 55 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~ 55 (466)
-+.+.+.|+...+.++. .....+.+.|++..|..|.-
T Consensus 34 ~mNi~L~~~~~~~~~g~-~~~~~~~v~IRG~~I~~i~~ 70 (76)
T cd01723 34 WMNIHLREVICTSKDGD-KFWKMPECYIRGNTIKYLRV 70 (76)
T ss_pred CCceEEEeEEEECCCCc-EeeeCCcEEEeCCEEEEEEc
Confidence 35678888887754432 22233588999999998864
No 198
>PF11068 YlqD: YlqD protein; InterPro: IPR021297 This bacterial family of proteins has no known function. ; PDB: 4DCI_C.
Probab=22.19 E-value=94 Score=24.71 Aligned_cols=14 Identities=14% Similarity=0.238 Sum_probs=12.8
Q ss_pred ceEEEEECCEEEEE
Q 012333 40 NGGVFVVQDRIKAI 53 (466)
Q Consensus 40 ~~~v~I~~G~I~~I 53 (466)
+..|+|+||+|.+|
T Consensus 117 ~~EIvvkDG~V~eI 130 (131)
T PF11068_consen 117 GVEIVVKDGKVIEI 130 (131)
T ss_dssp TEEEEEETTEEEEE
T ss_pred CcEEEEECCEEEEe
Confidence 67999999999987
No 199
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=21.74 E-value=5.9e+02 Score=25.28 Aligned_cols=103 Identities=15% Similarity=0.075 Sum_probs=54.1
Q ss_pred HHHHHHhcCceeeeecCc----cCHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCC
Q 012333 130 CGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (466)
Q Consensus 130 ~~~~~~~~GvTtv~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (466)
..+.++.+|+..++-+.. .+.....+.++..|.......++... +. .. .+...+..+++.+.+.
T Consensus 101 ~v~~A~~~Gvd~irif~~lnd~~n~~~~v~~ak~~G~~v~~~i~~t~~-----p~----~~---~~~~~~~a~~l~~~Ga 168 (448)
T PRK12331 101 FVQKSVENGIDIIRIFDALNDVRNLETAVKATKKAGGHAQVAISYTTS-----PV----HT---IDYFVKLAKEMQEMGA 168 (448)
T ss_pred HHHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCeEEEEEEeecC-----CC----CC---HHHHHHHHHHHHHcCC
Confidence 345678899988765432 22344556667778765443333221 10 11 1223344444445444
Q ss_pred CCeEEEEeecccccCCHHHHHHHHHHHHH-cCCccceeccCCc
Q 012333 206 GRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 247 (466)
Q Consensus 206 ~~i~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~ 247 (466)
..+.+ . ...-..++....+++...++ .++++.+|+.++.
T Consensus 169 d~I~i-~--Dt~G~l~P~~v~~lv~alk~~~~~pi~~H~Hnt~ 208 (448)
T PRK12331 169 DSICI-K--DMAGILTPYVAYELVKRIKEAVTVPLEVHTHATS 208 (448)
T ss_pred CEEEE-c--CCCCCCCHHHHHHHHHHHHHhcCCeEEEEecCCC
Confidence 43332 1 11123566777777776654 4788888887643
No 200
>PRK08392 hypothetical protein; Provisional
Probab=20.93 E-value=1.3e+02 Score=26.16 Aligned_cols=44 Identities=16% Similarity=0.217 Sum_probs=28.6
Q ss_pred hhHHHHHhcCCeEEECccchhhccCCccHHHHHHcCCcEEEccCCC
Q 012333 288 TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGA 333 (466)
Q Consensus 288 ~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~gi~~~~gsD~~ 333 (466)
+.++.+++.|+.+.++-.. +.....-++.+.+.|+++++|||.-
T Consensus 141 ~i~~~~~~~g~~lEiNt~~--~~p~~~~l~~~~~~G~~~~igSDAH 184 (215)
T PRK08392 141 EILDLAEAYGKAFEISSRY--RVPDLEFIRECIKRGIKLTFASDAH 184 (215)
T ss_pred HHHHHHHHhCCEEEEeCCC--CCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 3467778888887766321 1111123556778899999999964
No 201
>PLN02727 NAD kinase
Probab=20.59 E-value=8.3e+02 Score=26.82 Aligned_cols=31 Identities=13% Similarity=0.105 Sum_probs=22.3
Q ss_pred ccCCHHHHHHHHHHH-HHcCCccceeccCCcc
Q 012333 218 MNATDRLLLETRDMA-REFKTGIHMHVAEIPY 248 (466)
Q Consensus 218 ~~~~~~~l~~~~~~a-~~~~~~v~~H~~~~~~ 248 (466)
...+++.++++.+.. .....|+.+||-....
T Consensus 322 ~apt~EqVe~fa~~l~~slpkPVLvHCKSGar 353 (986)
T PLN02727 322 TAPSAEQVEKFASLVSDSSKKPIYLHSKEGVW 353 (986)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCEEEECCCCCc
Confidence 345677777777777 5568888899876653
No 202
>PRK15108 biotin synthase; Provisional
Probab=20.29 E-value=5.1e+02 Score=24.63 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=9.7
Q ss_pred cCChhhHHHHHhcCCe
Q 012333 284 WVNHTEIGLLSRAGVK 299 (466)
Q Consensus 284 ~~~~~~~~~~~~~g~~ 299 (466)
.++.+.++++++.|+.
T Consensus 133 ~ls~e~l~~LkeAGld 148 (345)
T PRK15108 133 TLSESQAQRLANAGLD 148 (345)
T ss_pred cCCHHHHHHHHHcCCC
Confidence 4556666666666654
Done!