Query 012333
Match_columns 466
No_of_seqs 151 out of 1357
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 07:22:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012333.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012333hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dzh_A Amidohydrolase; adenosi 100.0 7.4E-57 2.5E-61 446.0 38.8 429 17-463 12-442 (472)
2 3lnp_A Amidohydrolase family p 100.0 4.2E-56 1.4E-60 441.0 42.3 430 16-463 20-460 (468)
3 4dyk_A Amidohydrolase; adenosi 100.0 2.7E-56 9.1E-61 440.5 38.7 429 16-463 5-435 (451)
4 3h4u_A Amidohydrolase; signatu 100.0 1E-55 3.4E-60 439.6 40.2 440 8-463 18-471 (479)
5 4f0r_A 5-methylthioadenosine/S 100.0 9.6E-56 3.3E-60 436.0 39.2 428 17-463 4-433 (447)
6 3ls9_A Triazine hydrolase; atr 100.0 1.7E-54 5.8E-59 428.4 43.4 430 21-464 2-453 (456)
7 4aql_A Guanine deaminase; hydr 100.0 7.5E-53 2.6E-57 416.2 38.8 424 17-446 29-474 (476)
8 2paj_A Putative cytosine/guani 100.0 9E-51 3.1E-55 405.3 38.2 437 18-464 9-476 (492)
9 3hpa_A Amidohydrolase; signatu 100.0 2.2E-48 7.4E-53 387.0 41.2 438 10-463 20-471 (479)
10 4f0l_A Amidohydrolase; ssgcid, 100.0 4.7E-49 1.6E-53 389.1 33.1 417 18-463 11-453 (458)
11 2i9u_A Cytosine/guanine deamin 100.0 4.1E-48 1.4E-52 380.4 37.0 417 16-446 6-431 (439)
12 2ood_A BLR3880 protein; PSI-II 100.0 1.9E-47 6.7E-52 378.4 35.8 418 20-446 4-468 (475)
13 3mdu_A N-formimino-L-glutamate 100.0 1E-47 3.6E-52 378.1 32.9 417 23-465 4-450 (453)
14 1p1m_A Hypothetical protein TM 100.0 5.3E-48 1.8E-52 375.8 27.8 394 21-463 1-400 (406)
15 3v7p_A Amidohydrolase family p 100.0 6.2E-48 2.1E-52 376.3 26.7 401 21-454 2-415 (427)
16 2bb0_A Imidazolonepropionase; 100.0 4.7E-41 1.6E-45 328.4 34.9 379 18-448 4-420 (421)
17 1ra0_A Cytosine deaminase; alp 100.0 1.7E-42 6E-47 339.4 24.3 377 18-448 7-415 (430)
18 3feq_A Putative amidohydrolase 100.0 4.5E-42 1.5E-46 336.1 26.7 367 18-451 3-418 (423)
19 2r8c_A Putative amidohydrolase 100.0 1.9E-41 6.5E-46 331.6 26.5 360 18-448 3-418 (426)
20 3gnh_A L-lysine, L-arginine ca 100.0 8.9E-41 3E-45 324.8 31.0 358 19-443 2-402 (403)
21 2imr_A Hypothetical protein DR 100.0 6E-41 2.1E-45 327.1 27.5 359 16-408 34-417 (420)
22 2q09_A Imidazolonepropionase; 100.0 4.1E-40 1.4E-44 321.2 31.3 376 19-446 5-410 (416)
23 2puz_A Imidazolonepropionase; 100.0 8.4E-40 2.9E-44 319.4 33.4 376 17-442 13-418 (419)
24 2qt3_A N-isopropylammelide iso 100.0 1.4E-40 4.9E-45 323.3 27.0 371 17-448 3-402 (403)
25 3be7_A Zn-dependent arginine c 100.0 4.1E-38 1.4E-42 306.4 33.0 357 17-446 4-403 (408)
26 2p9b_A Possible prolidase; pro 100.0 2.6E-38 8.8E-43 312.3 31.3 381 18-455 12-446 (458)
27 2qs8_A XAA-Pro dipeptidase; am 100.0 1.5E-37 5.2E-42 303.3 31.6 355 17-442 5-411 (418)
28 1gkr_A Hydantoinase, non-ATP d 100.0 4.3E-37 1.5E-41 303.9 23.9 377 18-457 1-450 (458)
29 3ooq_A Amidohydrolase; structu 100.0 3.7E-38 1.3E-42 305.0 15.3 364 17-446 3-390 (396)
30 2fty_A Dihydropyrimidinase; al 100.0 3E-36 1E-40 301.8 28.5 386 18-456 2-517 (559)
31 3sfw_A Dihydropyrimidinase; hy 100.0 3.5E-36 1.2E-40 296.5 26.8 380 19-456 1-453 (461)
32 1gkp_A Hydantoinase; hydrolase 100.0 7.4E-37 2.5E-41 302.2 20.1 380 20-457 1-452 (458)
33 2ogj_A Dihydroorotase; TIM bar 100.0 1.3E-36 4.4E-41 296.4 19.1 367 16-462 12-406 (417)
34 3icj_A Uncharacterized metal-d 100.0 1.9E-35 6.5E-40 292.8 27.5 345 20-411 37-503 (534)
35 2vun_A Enamidase; nicotinate d 100.0 1.4E-35 4.8E-40 286.4 25.6 354 18-449 1-377 (386)
36 2gwn_A Dihydroorotase; zinc-bi 100.0 2.7E-36 9.3E-41 296.6 17.6 369 18-456 3-448 (452)
37 1nfg_A D-hydantoinase; TIM bar 100.0 2.7E-36 9.3E-41 297.9 15.1 379 19-456 1-450 (457)
38 1yrr_A N-acetylglucosamine-6-p 100.0 4.1E-35 1.4E-39 282.4 21.6 342 21-444 2-382 (382)
39 3e74_A Allantoinase; (beta/alp 100.0 6.2E-35 2.1E-39 287.3 23.0 377 16-457 20-469 (473)
40 1e9y_B Urease subunit beta; hy 100.0 4.5E-34 1.5E-38 284.4 28.0 332 17-444 64-459 (569)
41 2vm8_A Dihydropyrimidinase-rel 100.0 7.4E-35 2.5E-39 290.6 22.4 381 19-456 26-480 (501)
42 2ics_A Adenine deaminase; TIM 100.0 6.9E-35 2.4E-39 280.9 19.9 347 17-447 3-375 (379)
43 3dc8_A Dihydropyrimidinase; TI 100.0 2.6E-34 8.9E-39 283.4 24.3 376 19-456 1-450 (490)
44 1xrt_A Dihydroorotase, dhoase; 100.0 3.3E-34 1.1E-38 283.3 24.1 362 15-444 43-467 (467)
45 2z00_A Dihydroorotase; zinc bi 100.0 4.4E-33 1.5E-37 272.5 31.3 355 21-446 2-426 (426)
46 4ac7_C Urease subunit alpha; h 100.0 4.5E-34 1.5E-38 279.7 22.6 346 6-444 54-460 (570)
47 3mpg_A Dihydroorotase, dhoase; 100.0 1.3E-33 4.6E-38 275.9 26.1 366 19-448 1-427 (428)
48 4ubp_C Protein (urease (chain 100.0 4.5E-34 1.5E-38 279.7 21.7 346 6-444 54-460 (570)
49 1rk6_A D-aminoacylase; TIM bar 100.0 2.4E-33 8.1E-38 279.0 27.0 388 8-457 10-492 (496)
50 3gip_A N-acyl-D-glutamate deac 100.0 3.3E-33 1.1E-37 276.1 27.0 373 16-458 4-478 (480)
51 3hm7_A Allantoinase; metallo-d 100.0 4E-34 1.4E-38 281.3 19.7 363 17-446 4-441 (448)
52 2vhl_A N-acetylglucosamine-6-p 100.0 3.5E-33 1.2E-37 270.3 23.4 347 18-449 2-395 (396)
53 3gri_A Dihydroorotase, dhoase; 100.0 5.7E-32 2E-36 263.5 30.0 355 21-446 2-424 (424)
54 2ftw_A Dihydropyrimidine amido 100.0 5.8E-33 2E-37 277.2 23.4 376 18-456 7-462 (521)
55 3mtw_A L-arginine carboxypepti 100.0 7.8E-33 2.7E-37 266.6 20.8 355 21-442 4-401 (403)
56 2vr2_A Dihydropyrimidinase; hy 100.0 2.2E-32 7.7E-37 274.0 24.8 382 18-456 26-485 (541)
57 4gy7_A Urease; JACK bean, hydr 100.0 4.3E-33 1.5E-37 286.2 14.0 347 17-443 335-729 (840)
58 3nqb_A Adenine deaminase 2; PS 100.0 8E-31 2.7E-35 263.7 27.5 331 16-448 32-378 (608)
59 3mkv_A Putative amidohydrolase 100.0 1E-30 3.5E-35 253.3 25.7 360 17-443 2-413 (426)
60 3iv8_A N-acetylglucosamine-6-p 100.0 3.3E-31 1.1E-35 249.3 19.7 344 21-443 5-381 (381)
61 1onw_A Isoaspartyl dipeptidase 100.0 5.3E-30 1.8E-34 247.5 26.5 339 19-449 8-383 (390)
62 4ep8_C Urease subunit alpha; a 100.0 1.3E-30 4.4E-35 263.1 12.6 112 315-443 343-455 (566)
63 1o12_A N-acetylglucosamine-6-p 100.0 4.4E-29 1.5E-33 238.8 15.5 311 39-445 28-376 (376)
64 3pnu_A Dihydroorotase; TIM bar 99.7 6.1E-15 2.1E-19 137.8 21.4 161 220-411 133-332 (359)
65 2pgf_A Adenosine deaminase; me 99.7 3.3E-15 1.1E-19 141.2 18.6 243 100-388 90-359 (371)
66 3ggm_A Uncharacterized protein 99.6 2.4E-15 8.2E-20 108.9 7.8 70 18-91 3-72 (81)
67 3pao_A Adenosine deaminase; st 99.6 8.1E-14 2.8E-18 128.3 18.8 243 100-388 53-318 (326)
68 3rys_A Adenosine deaminase 1; 99.6 4.8E-13 1.6E-17 124.0 23.0 243 101-389 57-322 (343)
69 2z26_A Dihydroorotase, dhoase; 99.5 7.1E-13 2.4E-17 124.7 20.1 155 220-394 117-312 (347)
70 3iar_A Adenosine deaminase; pu 99.4 6.2E-11 2.1E-15 110.6 21.6 135 223-388 192-333 (367)
71 2ob3_A Parathion hydrolase; me 99.2 2.3E-09 8E-14 99.7 20.3 228 130-386 52-325 (330)
72 1bf6_A Phosphotriesterase homo 99.1 1E-08 3.6E-13 94.0 20.4 227 129-386 37-291 (291)
73 2vc7_A Aryldialkylphosphatase; 99.1 3.3E-08 1.1E-12 91.7 23.2 230 128-386 50-314 (314)
74 3ovg_A Amidohydrolase; structu 98.9 4.1E-07 1.4E-11 84.7 22.5 260 127-404 51-346 (363)
75 4gxw_A Adenosine deaminase; am 98.9 1.3E-07 4.4E-12 88.7 18.9 224 121-388 92-342 (380)
76 1zzm_A Putative deoxyribonucle 98.8 3.3E-07 1.1E-11 82.3 20.0 137 223-387 114-258 (259)
77 3k2g_A Resiniferatoxin-binding 98.8 2.6E-06 9E-11 79.6 25.8 233 126-389 87-356 (364)
78 2y1h_A Putative deoxyribonucle 98.8 1.2E-06 4E-11 79.3 22.7 134 223-389 126-267 (272)
79 3tn4_A Phosphotriesterase; lac 98.8 1E-06 3.5E-11 81.9 22.3 240 122-385 80-358 (360)
80 3gtx_A Organophosphorus hydrol 98.7 1.1E-06 3.6E-11 81.5 19.5 242 119-386 57-339 (339)
81 2a3l_A AMP deaminase, AMPD; at 98.7 2.6E-08 8.9E-13 99.5 7.8 128 229-388 504-642 (701)
82 1xwy_A DNAse TATD, deoxyribonu 98.7 1.1E-06 3.8E-11 79.1 17.9 137 223-387 112-262 (264)
83 3rcm_A TATD family hydrolase; 98.7 4.8E-06 1.6E-10 75.2 21.7 142 222-389 113-266 (287)
84 3rhg_A Putative phophotriester 98.6 3.9E-06 1.3E-10 78.5 19.8 230 126-389 76-346 (365)
85 3pnz_A Phosphotriesterase fami 98.6 6.8E-06 2.3E-10 75.7 20.5 241 126-387 47-328 (330)
86 1yix_A Deoxyribonuclease YCFH; 98.5 2.1E-05 7.3E-10 70.6 21.8 137 222-388 110-257 (265)
87 3lgd_A Adenosine deaminase CEC 98.4 5.2E-06 1.8E-10 80.3 14.7 132 206-348 292-432 (508)
88 3gg7_A Uncharacterized metallo 98.3 1.5E-06 5.1E-11 76.8 8.2 136 223-388 104-245 (254)
89 3ipw_A Hydrolase TATD family p 98.3 5.9E-06 2E-10 75.6 12.1 137 223-388 154-323 (325)
90 2gzx_A Putative TATD related D 98.2 5.7E-05 1.9E-09 67.8 16.9 140 221-389 107-257 (265)
91 2xio_A Putative deoxyribonucle 98.2 7.9E-06 2.7E-10 74.9 11.2 142 223-394 127-298 (301)
92 1j6o_A TATD-related deoxyribon 98.1 4.3E-05 1.5E-09 68.7 13.8 138 222-388 119-266 (268)
93 4i6k_A Amidohydrolase family p 98.0 0.00026 8.8E-09 64.5 16.7 139 220-388 134-292 (294)
94 2ffi_A 2-pyrone-4,6-dicarboxyl 97.9 0.00027 9.3E-09 64.1 15.4 141 219-389 120-281 (288)
95 3guw_A Uncharacterized protein 97.9 0.00011 3.9E-09 65.2 12.0 137 222-389 109-250 (261)
96 3cjp_A Predicted amidohydrolas 97.4 0.018 6E-07 51.5 18.7 134 221-388 128-265 (272)
97 4d9a_A 2-pyrone-4,6-dicarbaxyl 97.1 0.0069 2.4E-07 55.1 13.2 144 218-392 133-297 (303)
98 2dvt_A Thermophilic reversible 97.0 0.012 4.2E-07 54.1 14.6 28 219-246 141-168 (327)
99 3irs_A Uncharacterized protein 96.9 0.036 1.2E-06 50.1 16.3 221 130-392 52-285 (291)
100 3e2v_A 3'-5'-exonuclease; stru 96.8 0.0068 2.3E-07 56.7 10.6 93 224-333 180-305 (401)
101 2f6k_A Metal-dependent hydrola 96.6 0.029 9.9E-07 51.0 13.4 145 220-387 132-307 (307)
102 4do7_A Amidohydrolase 2; enzym 96.2 0.091 3.1E-06 47.7 13.8 139 222-388 121-289 (303)
103 2hbv_A 2-amino-3-carboxymucona 95.0 0.42 1.4E-05 43.9 13.6 28 219-246 154-181 (334)
104 2wm1_A 2-amino-3-carboxymucona 93.8 2 6.8E-05 39.3 15.5 28 219-246 151-178 (336)
105 3qy7_A Tyrosine-protein phosph 93.3 2.4 8.4E-05 37.1 14.3 83 287-386 147-233 (262)
106 2wje_A CPS4B, tyrosine-protein 92.2 5.3 0.00018 34.5 16.8 49 287-335 151-207 (247)
107 3nur_A Amidohydrolase; TIM bar 91.9 7.6 0.00026 35.8 16.8 45 202-247 153-197 (357)
108 2gwg_A 4-oxalomesaconate hydra 89.3 3.4 0.00012 38.0 11.6 147 220-387 156-332 (350)
109 1v77_A PH1877P, hypothetical p 87.8 0.89 3.1E-05 38.5 5.9 87 286-387 113-209 (212)
110 1itu_A Renal dipeptidase; glyc 81.2 21 0.00071 32.9 12.2 131 224-386 179-335 (369)
111 2i5g_A Amidohydrolase; NYSGXRC 80.4 32 0.0011 31.0 13.1 92 224-333 140-251 (325)
112 2yb1_A Amidohydrolase; HET: AM 72.8 50 0.0017 29.1 13.5 71 264-334 174-251 (292)
113 4inf_A Metal-dependent hydrola 68.2 55 0.0019 30.1 11.7 29 219-247 187-215 (373)
114 3b40_A PVDM, probable dipeptid 63.2 99 0.0034 28.9 12.8 62 224-303 194-265 (417)
115 2qpx_A Predicted metal-depende 58.7 37 0.0013 31.4 8.7 104 227-334 213-321 (376)
116 3ij6_A Uncharacterized metal-d 56.4 1.1E+02 0.0037 27.2 12.3 145 219-387 138-305 (312)
117 3ly0_A Dipeptidase AC. metallo 56.3 1.2E+02 0.0041 27.7 12.1 131 224-386 193-352 (364)
118 2rag_A Dipeptidase; aminohydro 54.9 1.4E+02 0.0047 28.0 13.4 64 224-305 210-283 (417)
119 3id7_A Dipeptidase; streptomyc 47.8 1.6E+02 0.0053 27.4 10.8 65 224-306 172-246 (400)
120 4e38_A Keto-hydroxyglutarate-a 43.6 73 0.0025 27.0 7.3 91 221-330 44-134 (232)
121 2q01_A Uronate isomerase; stru 29.7 2.6E+02 0.0089 26.8 9.4 156 225-389 292-474 (497)
122 2ki0_A DS119; beta-alpha-beta, 29.6 59 0.002 17.2 2.7 22 220-241 12-33 (36)
123 1mli_A Muconolactone isomerase 26.6 59 0.002 23.2 3.3 43 365-408 12-59 (96)
124 3dx5_A Uncharacterized protein 26.6 1.9E+02 0.0066 24.7 7.7 106 132-244 22-144 (286)
125 3neh_A Renal dipeptidase famil 24.6 1.3E+02 0.0046 26.8 6.1 128 226-386 157-309 (318)
126 2isw_A Putative fructose-1,6-b 23.9 2.8E+02 0.0096 24.8 8.0 80 222-322 193-272 (323)
No 1
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=100.00 E-value=7.4e-57 Score=446.04 Aligned_cols=429 Identities=27% Similarity=0.447 Sum_probs=362.1
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
+++|++|+|++|+++++...++.+++|+|+||+|++|++..+.+..+ ++.++||++|++|+|||||+|+|+.++.+++
T Consensus 12 ~~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~--~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g 89 (472)
T 4dzh_A 12 EPCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRF--APARTVSRPDAALMPGLVNAHTHNPMTLLRG 89 (472)
T ss_dssp EEEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHE--EEEEEEEEEEEEEEECEEEEEECGGGGGGTT
T ss_pred CcCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcC--CCCeEEeCCCcEEEECccccccChhhHHhcc
Confidence 45889999999999887677888999999999999999865543222 2568999999999999999999999999999
Q ss_pred ccCCCCchHhhhhccccccC-CCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCCC
Q 012333 97 IADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (466)
...+.++.+|+....|+.+. ..++++.+......+.+++++|||++.+++ .......++..+.|++........+.
T Consensus 90 ~~~~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~a~~~~g~r~~~~~~~~~~-- 166 (472)
T 4dzh_A 90 VADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENY-FFADVQAAVYKQHGFRALVGAVIIDF-- 166 (472)
T ss_dssp SSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEEC-SCHHHHHHHHHHTTCEEEEEEEECSS--
T ss_pred ccCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHhCCeEEEEecccCC--
Confidence 88899999999998888755 477778788888888999999999999987 55677788888999998776655532
Q ss_pred CCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh
Q 012333 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (466)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 255 (466)
+..+ .....+.+....+.++.+.. .+.+++.++++..+..+++.+.++++.|+++|+++++|+.+...+......
T Consensus 167 --~~~~-~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~ 241 (472)
T 4dzh_A 167 --PTAW-ASSDDEYFARAGELHDQWRD--DPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVA 241 (472)
T ss_dssp --CCSS-CSSHHHHHHHHHHHHHHHTT--CSSEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH
T ss_pred --Cccc-ccCHHHHHHHHHHHHHHhCC--CCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 1111 22445566666667666654 467888889999999999999999999999999999999988766665555
Q ss_pred hcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCC
Q 012333 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (466)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~ 334 (466)
..+. ...+.+...+.++.+.++.|+.++++++++++++.|+.+++||.+++.. .+.++++.+++.|+++++|||++.
T Consensus 242 ~~g~--~~i~~~~~~g~~~~~~~~~H~~~l~~~~i~~l~~~g~~v~~~p~s~~~~~~~~~~~~~~~~~Gv~v~lgtD~~~ 319 (472)
T 4dzh_A 242 QYGQ--RPLARLDRLGLVNDRLIAVHMTQLTEAEIHLCAERGVSVVHCPESNLKLASGFCPACALQRASVNLAIGTDGCA 319 (472)
T ss_dssp HHSS--CHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHTTCEEEECCCCTT
T ss_pred HhCC--CHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCEEEEChHHHHhcCCCCccHHHHHHCCCCEEEECCCCc
Confidence 4443 4678888899999999999999999999999999999999999998876 678899999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCC
Q 012333 335 SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (466)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~ 414 (466)
.++..+++.+++.+....+... ..+.++|++++++++|.|||+++|+++++|+|++||.|||||+|.+.+...|
T Consensus 320 ~~~~~~~~~~~~~a~~~~~~~~------~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~ 393 (472)
T 4dzh_A 320 SNNDLDMFSENRTAAILAKAVA------NDATALDAATTLRAATLGGARALGFGDRIGSIEVGKQADLVCVDLSALETQP 393 (472)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHH------TCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCS
T ss_pred CCCCCCHHHHHHHHHHHhhhhc------CCCCcCCHHHHHHHHHHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCCccCC
Confidence 6667899999988766554321 1235699999999999999999999888999999999999999999777778
Q ss_pred cCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 415 VHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 415 ~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
..+|+..+++.....+|..||++|++||++|+++++++++++++.++..
T Consensus 394 ~~~~~~~l~~~~~~~~V~~v~v~G~~v~~~g~~~~~d~~~i~~~~~~~~ 442 (472)
T 4dzh_A 394 LHHVLSQLIYAAGRHQVTDVWIAGKPKLVQRELIDMDTAALVANARQWR 442 (472)
T ss_dssp CSCHHHHHHHTCCGGGEEEEEETTEEEEETTEETTCCHHHHHHHHHHHH
T ss_pred ccCHHHHHhhcCCCCCceEEEECCEEEEECCEECcCCHHHHHHHHHHHH
Confidence 8899999888888889999999999999999999999999998877543
No 2
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=100.00 E-value=4.2e-56 Score=441.03 Aligned_cols=430 Identities=28% Similarity=0.487 Sum_probs=359.0
Q ss_pred cccceEEEEccEEEeecCCc------ceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCC
Q 012333 16 GSSSTMILHNAVIVTMDKES------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHT 89 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d~~~------~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~ 89 (466)
.++++++|+|++|+++++.. .++++++|+|+||+|++|++..+. ..++.++||++|++|+|||||+|+|+
T Consensus 20 ~~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~----~~~~~~viD~~g~~v~PGlID~H~H~ 95 (468)
T 3lnp_A 20 KAHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSC----QIPATETLDLGQQVLMPGWVNAHGHA 95 (468)
T ss_dssp -CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTTC----CCCEEEEEECCSEEEEECEEECSCCG
T ss_pred CccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCccc----cCCCCeEEeCCCcEEEeCeechhhCh
Confidence 45689999999999987755 577899999999999999986531 11356899999999999999999999
Q ss_pred cccccccccCCCCchHhhhhccccccC-CCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeec
Q 012333 90 SQQLAKGIADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQ 168 (466)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (466)
.++.+++...+.++.+|+....|+.+. ..++++.+......+.+++++|||++.++. .......++..+.|++.....
T Consensus 96 ~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~ 174 (468)
T 3lnp_A 96 AMSLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMY-FYPQQSGEAALAAGIRAVCFA 174 (468)
T ss_dssp GGGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECC-SCHHHHHHHHHHHTCEEEEEE
T ss_pred hhhhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEec
Confidence 999999988889999999998888765 467777777777888999999999999984 455677888889999988776
Q ss_pred ccccCCCCCCcccccCChHHHHHHHHHHHHHhccCC---CCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccC
Q 012333 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA---DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (466)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 245 (466)
...+.. ..+ .....+.+....+.++.+.... .+.+...+.++..+..+++.+.++++.|+++|+++++|+.+
T Consensus 175 ~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e 249 (468)
T 3lnp_A 175 PVLDFP----TNY-AQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLDMPVQIHLHE 249 (468)
T ss_dssp EECSSC----CSS-CSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESC
T ss_pred cccCCC----ccc-ccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 655321 111 2244556666666766665443 34788888899989999999999999999999999999988
Q ss_pred CcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCC
Q 012333 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADI 324 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi 324 (466)
............+. ..++.+...+.++.+.++.|+.++++++++++++.|+.+++||.+++.. .+.++++.+++.|+
T Consensus 250 ~~~~~~~~~~~~g~--~~i~~~~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~~~~~~~~~~~~Gv 327 (468)
T 3lnp_A 250 TDFEVSESLETFNK--RPTQRLADIGFLNERVSCVHMTQVDDGDIKILQKTGASIIHCPESNLKLASGFCPIAKLSAANI 327 (468)
T ss_dssp SHHHHHHHHHHHSS--CHHHHHHHTTCCSTTEEEEECCSCCHHHHHHHHHHCCEEEECHHHHHHTTCCCCCHHHHHHTTC
T ss_pred CHHHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHhcCCEEEEChhhhhhcCCCCCCHHHHHHCCC
Confidence 76655555544443 4788889999999999999999999999999999999999999998876 67889999999999
Q ss_pred cEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEE
Q 012333 325 CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 404 (466)
Q Consensus 325 ~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv 404 (466)
++++|||+++.+...+++.+++.+....+... ..+.++|++++++++|.|||+++|+++++|+|++||.|||||
T Consensus 328 ~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv 401 (468)
T 3lnp_A 328 PLAIGTDGAASNNDLDMFSETKTAALLAKGVS------QDASAIPAIEALTMATLGGARALGIDDITGSLKPGKAADIQA 401 (468)
T ss_dssp CEEECCCCTTSSCCCCHHHHHHHHHHHHHHHH------TCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEE
T ss_pred eEEEECCCCcCCCCCCHHHHHHHHHHHhhhcc------CCCCcCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEE
Confidence 99999999877667899999988776554321 123469999999999999999999988899999999999999
Q ss_pred EcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 405 VDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 405 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
||.+.+...|.+++++.+++.....+|..||++|++||++|+++++++++++++.++..
T Consensus 402 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~ 460 (468)
T 3lnp_A 402 IDLNTLSSQPVFDPVSHMVYCTKSTQVSHVWVNGRCLLKNGELTTLNEETLINHAKAWA 460 (468)
T ss_dssp EECCSGGGCSCSCHHHHHHHSCCGGGEEEEEETTEEEEETTEESSSCHHHHHHHHHHHH
T ss_pred EeCCCCccCCccCHHHHhhccCCCCCceEEEECCEEEEECCeECCCCHHHHHHHHHHHH
Confidence 99998777788888888888877889999999999999999999999999999887654
No 3
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.7e-56 Score=440.48 Aligned_cols=429 Identities=29% Similarity=0.468 Sum_probs=360.7
Q ss_pred cccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccc
Q 012333 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~ 95 (466)
.++++++|+|++|+++++...++.+++|+|+||+|++|++..+. . ..+++++||++|++|+|||||+|+|+.++.++
T Consensus 5 ~~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~-~--~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~ 81 (451)
T 4dyk_A 5 RNPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQA-M--RHGATEIRELPGMLLAPGLVNAHGHSAMSLFR 81 (451)
T ss_dssp -CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHH-T--TTCEEEEEEEEEEEEEECEEECCCCGGGGGGT
T ss_pred cchhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCcccc-c--cCCCCeEEeCCCCEEeecccchhhChhhHHhc
Confidence 34689999999999987767788899999999999999985543 1 11366899999999999999999999999999
Q ss_pred cccCCCCchHhhhhccccccC-CCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCC
Q 012333 96 GIADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCG 174 (466)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (466)
+...+.++.+|+....|+.+. ..++++.+......+.+++++|||++.++. .......++..+.|++.......++.
T Consensus 82 g~~~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~a~~~~g~r~~~~~~~~~~- 159 (451)
T 4dyk_A 82 GLADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMY-FYPQAICGVVHDSGVRAQVAIPVLDF- 159 (451)
T ss_dssp TSSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEEC-SCHHHHHHHHHHHTCEEEEEEEECSS-
T ss_pred cCCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEEchhhCC-
Confidence 998889999999998888765 466777777777888999999999999984 45677788888999998877666542
Q ss_pred CCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHH
Q 012333 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (466)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (466)
+..+ .......+....+..+.+.. .+.++..+.++..+..+++.+.++++.|+++|+++++|+.+.........
T Consensus 160 ---~~~~-~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~ 233 (451)
T 4dyk_A 160 ---PIPG-ARDSAEAIRQGMALFDDLKH--HPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAM 233 (451)
T ss_dssp ---CBTT-BSSHHHHHHHHHHHHHHTTT--CSSEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHH
T ss_pred ---CCcc-ccCHHHHHHHHHHHHHHhcC--CCceEEEEecCCCCccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHH
Confidence 1111 22445556666666666653 36788888999999999999999999999999999999998866655555
Q ss_pred hhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCC
Q 012333 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGA 333 (466)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~ 333 (466)
...+. ...+.+...+.++.+.++.|+.++++++++++++.|+.+++||.+++.. .+.++++.+++.|+++++|||++
T Consensus 234 ~~~g~--~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~~~~~~~~~~~~Gv~v~lgtD~~ 311 (451)
T 4dyk_A 234 ERNGE--RPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIHCPESNLKLASGFCPVEKLWQAGVNVAIGTDGA 311 (451)
T ss_dssp HHHSS--CHHHHHHHTTCCSTTEEEEECCCCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHHTCCEEECCCCG
T ss_pred HHhCC--CHHHHHHHCCCCCCCeEEEECCCCCHHHHHHHHHcCCEEEEChhhhhhccCCcccHHHHHhCCCeEEEECCCC
Confidence 44443 4778888999999999999999999999999999999999999998876 67889999999999999999998
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCC
Q 012333 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 413 (466)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~ 413 (466)
+.+...+++.+++.+....+.... .+.++|++++++++|.|||+++|+++++|+|++||.|||||+|.+.+...
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~ 385 (451)
T 4dyk_A 312 ASNNDLDLLGETRTAALLAKAVYG------QATALDAHRALRMATLNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQ 385 (451)
T ss_dssp GGSSCCCHHHHHHHHHHHHHHHHT------CTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEEECCSGGGC
T ss_pred ccCCCCCHHHHHHHHHHHhhhhcC------CCCCCCHHHHHHHHHHHHHHHcCCCCCCcCcCCCCcCCEEEEeCCCCccC
Confidence 766677999999887765543211 23469999999999999999999988899999999999999999987777
Q ss_pred CcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 414 PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 414 ~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
|.++|+..+++.....+|..||++|++||++|+++++++++++++.++..
T Consensus 386 ~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~ 435 (451)
T 4dyk_A 386 PVYDPVSQLIYASGRDCVRHVWVGGRQLLDDGRLLRHDEQRLIARAREWG 435 (451)
T ss_dssp SCSCHHHHHHHHCCGGGEEEEEETTEEEEETTEESSSCHHHHHHHHHHHH
T ss_pred CCCCHHHHhhccCCCCCccEEEECCEEEEECCEECcCCHHHHHHHHHHHH
Confidence 88889888888888889999999999999999999999999998887654
No 4
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=100.00 E-value=1e-55 Score=439.64 Aligned_cols=440 Identities=28% Similarity=0.475 Sum_probs=346.9
Q ss_pred CCCCCCCCcccceEEEEccEE-EeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccc
Q 012333 8 GGSSSGSLGSSSTMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTH 86 (466)
Q Consensus 8 ~~~~~~~~~~~~~~lI~n~~i-~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H 86 (466)
+.+++....+|++++|+|+++ +++|+...++.+++|+|+||+|++|++..+.+ ..++++||++|++|+|||||+|
T Consensus 18 ~~~~~~~~~~m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~----~~~~~viD~~g~~v~PGlID~H 93 (479)
T 3h4u_A 18 ARAPNTSSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELP----ETADEVLDLRGHLVIPGLVNTH 93 (479)
T ss_dssp -----------CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSC----SCCSEEEECTTEEEEECEEECC
T ss_pred cccCCcccchhhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccC----CCCCeEEeCCCCEEecceeecc
Confidence 344555556778999999985 56666677888999999999999999865432 2367899999999999999999
Q ss_pred cCCcccccccccC--CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-----cCHHHHHHHHHH
Q 012333 87 VHTSQQLAKGIAD--DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVSEMAKAVEL 159 (466)
Q Consensus 87 ~H~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-----~~~~~~~~~~~~ 159 (466)
+|+.+...++... +.++.+|+... |+....+++++.+........+++++|||++.+++. .......++...
T Consensus 94 ~Hl~~~~~rg~~~~~~~~l~~~l~~~-~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~ 172 (479)
T 3h4u_A 94 HHMYQSLTRAVPAAQNAELFGWLTNL-YKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQR 172 (479)
T ss_dssp CCGGGGGSCSCTTTTTCCHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHH
T ss_pred cccchhhhccccccCCCCHHHHHHHh-hhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECccccCCcchHHHHHHHHHH
Confidence 9999998888765 78899999876 666667888888888888889999999999999742 224567888889
Q ss_pred hCCeEEeecccccCCC---CCCcccccCChHHHHHHHHHHHHHhccCC-CCCeEEEEeecccccCCHHHHHHHHHHHHHc
Q 012333 160 LGLRACLVQSTMDCGE---GLPASWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (466)
Q Consensus 160 ~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~ 235 (466)
.|++.......+..+. ++++..........+....+.++.+...+ .+.+...+.++..+.++++.+.++++.|+++
T Consensus 173 ~g~r~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~ 252 (479)
T 3h4u_A 173 IGMRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREY 252 (479)
T ss_dssp HTCEEEEEEEECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTSSCHHHHHHHHHHHHHH
T ss_pred cCCEEEEEeeecccccccccCCcccccccHHHHHHHHHHHHHHhhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHhc
Confidence 9999877665554321 12233333344566667777777776543 3677888888888899999999999999999
Q ss_pred CCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCc
Q 012333 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFA 314 (466)
Q Consensus 236 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~ 314 (466)
|+++++|+.+...+........+ ....+.+...+.++.+.++.|+.++++++++++++.|+.+++||.+++.. .+.+
T Consensus 253 g~~v~~H~~e~~~~~~~~~~~~g--~~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~l~~~~~ 330 (479)
T 3h4u_A 253 GVSLHTHLAENVNDIAYSREKFG--MTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGIA 330 (479)
T ss_dssp TCEEEEEESCSHHHHHC---------CHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCCCC
T ss_pred CCCEEEEeCCCHHHHHHHHHHcC--CCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChhHhhhcCCCCC
Confidence 99999999887655444443333 34678888999999999999999999999999999999999999999876 6788
Q ss_pred cHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCccccc
Q 012333 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 394 (466)
Q Consensus 315 ~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i 394 (466)
+++.+++.|+++++|||+++.++..+++.+++.+....+... .++.+|++++++++|.|||+++|+++ +|+|
T Consensus 331 ~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~al~~~T~~~A~~lg~~~-~G~l 402 (479)
T 3h4u_A 331 PVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGF-------GPDAMTAREALEIATLGGAKVLNRDD-IGAL 402 (479)
T ss_dssp CHHHHHHTTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHHH-------CTTSCCHHHHHHHTTHHHHHHHTCSS-SSSC
T ss_pred CHHHHHHCCCeEEEeCCCCccCCCcCHHHHHHHHHHHhcccC-------CCCCCCHHHHHHHHHHHHHHHhCCCC-CCcc
Confidence 999999999999999999877667899999998776654321 12349999999999999999999987 9999
Q ss_pred ccCCccCEEEEcCCCCCCCC-cCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 395 EAGKKADMVVVDPFSWPMVP-VHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 395 ~~G~~ADlvv~d~~~~~~~~-~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
++||.|||||+|.+.+...| .++|+..+++.. ..+|..||++|++||++|+++++++++++++..+..
T Consensus 403 ~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~-~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~ 471 (479)
T 3h4u_A 403 KPGMAADFAAFDLRQPLFAGALHDPVAALVFCA-PSQTAYTVVNGKVVVREGRLATLDLPPVIERHNALA 471 (479)
T ss_dssp STTSBCCEEEEETTSGGGTTCTTSHHHHHHHSS-CCCCSEEEETTEEEEETTEECSSCHHHHHHHHHHHH
T ss_pred CCCCcCCEEEEeCCCCccCCcccCHHHHHHccC-CCCcCEEEECCEEEEECCEECCCCHHHHHHHHHHHH
Confidence 99999999999999777666 778888877765 789999999999999999999999999998887654
No 5
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=100.00 E-value=9.6e-56 Score=435.98 Aligned_cols=428 Identities=28% Similarity=0.463 Sum_probs=356.3
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
++++++|+|++|+++++...++.+++|+|++|+|++|++..+.+ ..++.++||++|++|+|||||+|+|+.++.+++
T Consensus 4 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~---~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g 80 (447)
T 4f0r_A 4 SRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAA---GLEADERLELPDHVLMPGLINLHGHSAMSLLRG 80 (447)
T ss_dssp -CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHT---TSCEEEEEEEEEEEEEECEEEEEECGGGGGGTT
T ss_pred CcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccc---cCCCCeEEeCCCcEEeeCccchhhChhhHhhcc
Confidence 56899999999999887677888999999999999999865432 113568999999999999999999999999999
Q ss_pred ccCCCCchHhhhhccccccC-CCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCCC
Q 012333 97 IADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (466)
...+.++.+|+....|+.+. ..++++.+......+.+++++|||++.++. .......++....|++........+.
T Consensus 81 ~~~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~~~~~~-- 157 (447)
T 4f0r_A 81 LADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMY-FYNAAVARAGLASGMRTFVGCSILEF-- 157 (447)
T ss_dssp SSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECB-SCHHHHHHHHHHHTCEEEEEEEECSS--
T ss_pred CCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEEchhcCC--
Confidence 88888999999998888765 466667777777788889999999999985 45667788888999998876665532
Q ss_pred CCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh
Q 012333 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (466)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 255 (466)
+..+ .....+.+....+.++++. +...+++.+.++..+..+++.+.++++.|+++|+++++|+.+..........
T Consensus 158 --~~~~-~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~ 232 (447)
T 4f0r_A 158 --PTNY-ASNADDYIAKGMAERSQFL--GEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVK 232 (447)
T ss_dssp --CCSS-CSSHHHHHHHHHHHHHTTT--TCTTEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH
T ss_pred --Cccc-ccCHHHHHHHHHHHHHHhc--CCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH
Confidence 1111 2244555565566655544 3467888888888889999999999999999999999999888655555444
Q ss_pred hcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCC
Q 012333 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (466)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~ 334 (466)
..+. ...+.+...+.+..+.++.|+.++++++++++++.|+.+++||.++++. .+.++++.+++.|+++++|||+++
T Consensus 233 ~~g~--~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~ 310 (447)
T 4f0r_A 233 EHGQ--RPLARLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNMKLASGISPVSKLMDAGVAVGIGTDGAA 310 (447)
T ss_dssp HHSS--CHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHTTCEEEECCCCGG
T ss_pred HcCC--CHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEECchhhhhcCCCCCcHHHHHHCCCcEEEeCCCCc
Confidence 4433 3678888899999999999999999999999999999999999998876 678899999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCC
Q 012333 335 SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (466)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~ 414 (466)
.++..+++.+++.+....+.... .+.++|++++++++|.|||+++|+++++|+|++||.|||||+|.+.+...|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~ 384 (447)
T 4f0r_A 311 SNNKLDMLAETRLAALLAKVGTL------DPTSVPAAAAIRMATLNGARALGIADKVGSVKVGKQADLIALDLAQLETAP 384 (447)
T ss_dssp GTCCCCHHHHHHHHHHHHHHHHT------CTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCS
T ss_pred CCCCCCHHHHHHHHHHHhhhhcc------CCCCCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCCcCC
Confidence 76677899999887655543211 234699999999999999999999888999999999999999999777778
Q ss_pred cCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 415 VHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 415 ~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
.+++++.+++.....+|..||++|++||++|+++++++++++++.++..
T Consensus 385 ~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~ 433 (447)
T 4f0r_A 385 AFDPISHVVYAAGREQVSHVWVKGRALMRERKLTTLDESDLKARAGDWR 433 (447)
T ss_dssp CSCHHHHHHHTCCGGGEEEEEETTEEEEETTEESSSCHHHHHHHHHHHH
T ss_pred CcChHHHheecCCCCCceEEEECCEEEEECCeECcCCHHHHHHHHHHHH
Confidence 8888888888777889999999999999999999999999998887654
No 6
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=100.00 E-value=1.7e-54 Score=428.35 Aligned_cols=430 Identities=25% Similarity=0.355 Sum_probs=357.2
Q ss_pred EEEEcc-EEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccC
Q 012333 21 MILHNA-VIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (466)
Q Consensus 21 ~lI~n~-~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~ 99 (466)
++|+|+ .|+++|+....+.+++|+|+||+|++|++... ..++.++||++|++|+|||||+|+|+.++.+++...
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~-----~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~ 76 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLS-----DRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQ 76 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCC-----CTTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGG
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCC-----CCCCCeEEeCCCCEEecCeeecccccchhhhccccc
Confidence 789999 78888877778899999999999999998632 113678999999999999999999999999998754
Q ss_pred --CCCchHhhhhc------cccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc--------cCHHHHHHHHHHhCCe
Q 012333 100 --DVDLMTWLHDR------IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLR 163 (466)
Q Consensus 100 --~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~--------~~~~~~~~~~~~~g~~ 163 (466)
+.++.+|+... .|+. ..+++++.+......+.+++++|||++.+++. .......++..+.|++
T Consensus 77 ~~~~~l~~~l~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~a~~~~g~r 155 (456)
T 3ls9_A 77 LERVTMASWLEGVLTRSAGWWRD-GKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIR 155 (456)
T ss_dssp GSSCCHHHHHHHHHHHHHHHHHT-TSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCCTHHHHHHHHHHHHTCE
T ss_pred CCCCCHHHHHHHhcccccccccc-ccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccchhHHHHHHHHHHcCCE
Confidence 88899999876 4442 25788888888888999999999999999732 2244567888899999
Q ss_pred EEeecccccCC---CCCCcccccCChHHHHHHHHHHHHHhcc-CCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCcc
Q 012333 164 ACLVQSTMDCG---EGLPASWAVRTTDDCIQSQKELYAKHHH-AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239 (466)
Q Consensus 164 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v 239 (466)
.......++.+ .+.++........+.+....+.++.+.. .....+...++++..+..+++.+.++++.|+++|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v 235 (456)
T 3ls9_A 156 FHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRL 235 (456)
T ss_dssp EEEEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHTCEE
T ss_pred EEEEccccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCCE
Confidence 88766555432 1233444444556667777777777765 2346788888999899999999999999999999999
Q ss_pred ceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHH
Q 012333 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKE 318 (466)
Q Consensus 240 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~ 318 (466)
++|+.+.... .......+. ...+.+...+.++.+..+.|+.++++++++++++.|+.+++||.++++. .+.++++.
T Consensus 236 ~~H~~e~~~~-~~~~~~~~~--~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~l~~~~~~~~~ 312 (456)
T 3ls9_A 236 HTHFYEPLDA-GMSDHLYGM--TPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRMGWGLAPIRE 312 (456)
T ss_dssp EEEECCTTHH-HHHHHHHSS--CHHHHHHHTTCSSTTEEEEECCSCCGGGHHHHHHHTCEEEECHHHHHHTTCCCCCHHH
T ss_pred EEEeCCCchH-HHHHHHhCC--CHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEEChhHHhhcCCCcchHHH
Confidence 9999988776 555554443 4678888899999999999999999999999999999999999999877 67889999
Q ss_pred HHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCC
Q 012333 319 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (466)
Q Consensus 319 ~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~ 398 (466)
+++.|+++++|||+++.++..+++.+++.+....+... . ...++++|++++++++|.+||+++|+++ +|+|++||
T Consensus 313 ~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~al~~~T~~~A~~lg~~~-~G~l~~G~ 387 (456)
T 3ls9_A 313 YLDAGITVGFGTTGSASNDGGNLLGDLRLAALAHRPAD--P--NEPEKWLSARELLRMATRGSAECLGRPD-LGVLEEGR 387 (456)
T ss_dssp HHHTTCEEEECCCCTTSSCCCCHHHHHHHHHHHTGGGS--T--TCGGGSCCHHHHHHHTTHHHHHHTTCTT-SSCCSTTS
T ss_pred HHHCCCcEEEECCCCccCCCCCHHHHHHHHHHHhcccc--c--cccccCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCC
Confidence 99999999999999877667899999998877665432 1 1122369999999999999999999987 99999999
Q ss_pred ccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHhh
Q 012333 399 KADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 464 (466)
Q Consensus 399 ~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~~ 464 (466)
.|||||+|.+++...|.++++..+++.....+|..||++|++||++|+++++++++++++.++..-
T Consensus 388 ~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~~ 453 (456)
T 3ls9_A 388 AADIACWRLDGVDRVGVHDPAIGLIMTGLSDRASLVVVNGQVLVENERPVLADLERIVANTTALIP 453 (456)
T ss_dssp BCCEEEEESCSGGGTTBSSHHHHHHHCCSBCCCSEEEETTEEEEETTEESSSCHHHHHHHHHHHCC
T ss_pred ccCEEEEeCCCCccCCCCChHHHhhccCCCCCeeEEEECCEEEEECCEeCCCCHHHHHHHHHHHHH
Confidence 999999999988777888888888888777899999999999999999999999999999887643
No 7
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=100.00 E-value=7.5e-53 Score=416.23 Aligned_cols=424 Identities=21% Similarity=0.337 Sum_probs=347.9
Q ss_pred ccceEEEEccEEEeecC-CcceeeceEEEEEC-CEEEEEcCCchhh---hhhccCCCeEEeC-CCcEEeecccccccCCc
Q 012333 17 SSSTMILHNAVIVTMDK-ESRVFRNGGVFVVQ-DRIKAIGQSADIL---QQFSQMADQIIDL-QSQILLPGFVNTHVHTS 90 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~-~~~~~~~~~v~I~~-G~I~~Ig~~~~~~---~~~~~~~~~~iD~-~G~~v~PG~ID~H~H~~ 90 (466)
.+.+++|+|..|++.+. ...++++++|+|++ |||++|++..+.+ ..++..+.++||+ +|++|+|||||+|+|+.
T Consensus 29 ~~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~ 108 (476)
T 4aql_A 29 PPLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHAS 108 (476)
T ss_dssp --CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGG
T ss_pred CCccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchH
Confidence 35689999999998643 45677899999998 9999999865432 1122235689995 59999999999999999
Q ss_pred ccccccccCCCCchHhhhhccccccCCCChhHHHHHHHH-HHHHHHhcCceeeeecCccCHHH---HHHHHHHhCCeEEe
Q 012333 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLL-CGIELIHSGVTCFAEAGGQHVSE---MAKAVELLGLRACL 166 (466)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~GvTtv~~~~~~~~~~---~~~~~~~~g~~~~~ 166 (466)
++.+++...+.++.+|+....|+.+..+.+++.+..... ...+++++||||+.+++..+... +.++..+.|+|...
T Consensus 109 ~~~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~~~~~~~~~~~~~a~~~~G~r~~~ 188 (476)
T 4aql_A 109 QYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFV 188 (476)
T ss_dssp GGGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEecccCchHHHHHHHHHHHhCCEEEE
Confidence 999999999999999999999999988888775555544 34679999999999887655544 67788899999998
Q ss_pred ecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCC
Q 012333 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (466)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 246 (466)
+...++.....+. ........+++..+.+++++..+...++..++++..+.++++.+++++++|+++|+++++|+.+.
T Consensus 189 ~~~~~d~~~~~p~--~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~ 266 (476)
T 4aql_A 189 GKVCMDLNDTFPE--YKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISEN 266 (476)
T ss_dssp ECEECSCCSSCTT--SCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred eeccccCCCCCcc--cccCHHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCceEEEecCC
Confidence 8888775432222 33456777788888888887666678888899999999999999999999999999999999998
Q ss_pred cchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCc
Q 012333 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADIC 325 (466)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~ 325 (466)
..+........+......+.++..+.++.+.++.|+.++++++++++++.|+.+.+||.+++.. .+..|++++++.|++
T Consensus 267 ~~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~ 346 (476)
T 4aql_A 267 RDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSGFLNVLEVLKHEVK 346 (476)
T ss_dssp HHHHHHHHHHCTTSSSHHHHHHTTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHTTCE
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECchhhhhhCcchHHHHHHHHCCCc
Confidence 8877777776665446888999999999999999999999999999999999999999999877 678899999999999
Q ss_pred EEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEE
Q 012333 326 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVV 405 (466)
Q Consensus 326 ~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~ 405 (466)
+++|||.++. ...+++..++.+....+..... ...+.+++++++++++|.+||+++|+++++|+|++||.|||||+
T Consensus 347 v~lGtD~~~~-~~~~~~~~~~~a~~~~~~~~~~---~~~~~~l~~~~al~~aT~~~A~~lgl~~~~G~l~~G~~ADlvv~ 422 (476)
T 4aql_A 347 IGLGTDVAGG-YSYSMLDAIRRAVMVSNILLIN---KVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILI 422 (476)
T ss_dssp EEECCCTTTS-SCCCHHHHHHHHHHHHHHHHHT---TSSSSCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEE
T ss_pred EEEeCCCCCC-CCCCHHHHHHHHHHHHhhhhcc---cCCCCcCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCCCCEEEE
Confidence 9999998643 4678999998887665432211 12335799999999999999999999888999999999999999
Q ss_pred cCCCC----CC-------CCcCCcccceecccCCCCeeEEEEccEEEEECCe
Q 012333 406 DPFSW----PM-------VPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 446 (466)
Q Consensus 406 d~~~~----~~-------~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 446 (466)
|.+.. .. .+.++++..+++..+..+|..|||+|++|++.+.
T Consensus 423 d~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~~~~~V~~v~v~G~~v~~~~~ 474 (476)
T 4aql_A 423 NPKASDSPIDLFYGDFFGDISEAVIQKFLYLGDDRNIEEVYVGGKQVVPFSS 474 (476)
T ss_dssp CTTCTTCSCCCCTHHHHSSSTTHHHHHHHHHCCGGGEEEEEETTEEEECCC-
T ss_pred cCCCCCCccccccccccCCchhcHHHHHhhcCCCCCccEEEECCEEEecCCC
Confidence 99832 21 1246678888888888899999999999998653
No 8
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=9e-51 Score=405.33 Aligned_cols=437 Identities=25% Similarity=0.341 Sum_probs=307.9
Q ss_pred cceEEEEccE-EEeecCCcc-----eeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcc
Q 012333 18 SSTMILHNAV-IVTMDKESR-----VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (466)
Q Consensus 18 ~~~~lI~n~~-i~~~d~~~~-----~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~ 91 (466)
+++++|+|++ |++++ ... .+.+++|+|+||||++|++..+ + +++++||++|++|+|||||+|+|+..
T Consensus 9 ~~~~li~n~~~i~~~~-~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-----~-~~~~viD~~G~~v~PG~ID~H~H~~~ 81 (492)
T 2paj_A 9 QPSTLIRNAAAIMTGG-RGTADDPSRVPGPDIRIVGDTIDAIGALAP-----R-PGETIVDATDCVIYPAWVNTHHHLFQ 81 (492)
T ss_dssp -CEEEEECBSEEBCCC-CSSSSSCSBCCCCCEEEETTEEEEESSCCC-----C-TTCEEEECBTCEEEECEECCCCCGGG
T ss_pred CCCeEEECCEEEEecC-CccccccceecccEEEEECCEEEEEcCCCC-----C-CCCeEEECCCcEEeeCccccccChhh
Confidence 3689999999 99865 220 3467899999999999997542 1 35689999999999999999999987
Q ss_pred ccccccc--CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-c-------CHHHHHHHHHHhC
Q 012333 92 QLAKGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-Q-------HVSEMAKAVELLG 161 (466)
Q Consensus 92 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-~-------~~~~~~~~~~~~g 161 (466)
...++.. .+.++.+|+.+..|+.....++++.+......+..++++||||+++++. . .+....++....+
T Consensus 82 ~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~g 161 (492)
T 2paj_A 82 SLLKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLG 161 (492)
T ss_dssp GGCCSCC-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTT
T ss_pred HhhcCccCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhcccccccchHHHHHHHHHHcC
Confidence 7655544 4566888998888888888888877777777888899999999999863 1 2345566677788
Q ss_pred CeEEeecccccCCC----CCCcccccCChHHHHHHHHHHHHHhccCCC-CCeEEEEeeccc-ccCCHHHHHHHHHHHHHc
Q 012333 162 LRACLVQSTMDCGE----GLPASWAVRTTDDCIQSQKELYAKHHHAAD-GRIRIWFGIRQI-MNATDRLLLETRDMAREF 235 (466)
Q Consensus 162 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~-~~~~~~~l~~~~~~a~~~ 235 (466)
++.+......+... +..+..........+....++++.+..... +.+++.+.++.. ...+++.+.++++.+++.
T Consensus 162 ~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~ 241 (492)
T 2paj_A 162 LRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRL 241 (492)
T ss_dssp CEEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHHHHHHHHHHHHHT
T ss_pred CEEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEecccCCCCCCHHHHHHHHHHHHHc
Confidence 88876554432210 111111112223445555566555543222 456766777776 778999999999999999
Q ss_pred CCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCc
Q 012333 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFA 314 (466)
Q Consensus 236 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~ 314 (466)
|+++++|+.+............+ ....+.+...+.+..+.++.|+.++++++++++++.|+.+++||.++++. .+.+
T Consensus 242 g~~v~~H~~~~~~~~~~~~~~~g--~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~l~~~gv~v~~~p~~~~~l~~~~~ 319 (492)
T 2paj_A 242 GLRMHSHLSETVGYQDSAYSMYG--KSPVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHCPQSNGRLGSGIC 319 (492)
T ss_dssp TCEEEEECC-------------C--CCHHHHHHHTTCCSTTEEEESCCSCCHHHHHHHHHHTCEEEECHHHHHCC-----
T ss_pred CCcEEEEeCCChHHHHHHHHHcC--CCHHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCEEEECchhhcccCCCCC
Confidence 99999999875544433333222 23566667777777888999999999999999999999999999988765 4668
Q ss_pred cHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccc---cccCC-----CCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE---VFANG-----TTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 315 ~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
|++.+++.|+++++|||+++.+...+++.+++.+..+.+... .+..+ ...+.++|++++++++|.|||+++|
T Consensus 320 p~~~~~~~Gv~v~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~lg 399 (492)
T 2paj_A 320 PVREMADAGVPVSIGVDGAASNEAADMISEVHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMG 399 (492)
T ss_dssp CCTTHHHHTCCEEECCCHHHHCSCCSHHHHHHHHHHHHHHTC-------------------CCHHHHHHHHTHHHHHHHT
T ss_pred CHHHHHHCCCcEEEeCCCCCCCCCCCHHHHHHHHHHHhhhhcccccccccccccccCCcCcCCHHHHHHHHHHHHHHHhC
Confidence 899999999999999999765445689999887765544211 00000 1123569999999999999999999
Q ss_pred CCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHhh
Q 012333 387 WDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 464 (466)
Q Consensus 387 l~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~~ 464 (466)
++ ++|+|++||+|||||+|.+.+...|..+|+..+.+.....+|..||++|++||++|+++.+++++++++.++...
T Consensus 400 l~-~~Gsl~~Gk~ADlvvld~~~~~~~~~~~p~~~i~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~~ 476 (492)
T 2paj_A 400 LD-EVGKVAVGYAADIAVYRLDDPRYFGLHDPAIGPVASGGRPSVMALFSAGKRVVVDDLIEGVDIKELGGEARRVVR 476 (492)
T ss_dssp CT-TSSCCSTTSBCCEEEEECCSGGGTTCSSGGGHHHHSCSCCEEEEEEETTEEEEETTBCTTCCHHHHHHHHHHHHH
T ss_pred CC-CccccCCCCccCEEEEeCCCcccCCccCHHHHHHhcCCCCCceEEEECCEEEEECCeeccCCHHHHHHHHHHHHH
Confidence 97 789999999999999999966555667777777666556789999999999999999999999999988876543
No 9
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=100.00 E-value=2.2e-48 Score=386.97 Aligned_cols=438 Identities=28% Similarity=0.483 Sum_probs=319.9
Q ss_pred CCCCCCcccceEEEEccEE-EeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccC
Q 012333 10 SSSGSLGSSSTMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88 (466)
Q Consensus 10 ~~~~~~~~~~~~lI~n~~i-~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H 88 (466)
+|..+...+.|+||+|++| +|+|+...++++++|+|+||||++||+..+. +..++++||++|++|+|||||+|+|
T Consensus 20 ap~~~~~~p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~----~~~~~~vIDa~G~~v~PG~ID~H~H 95 (479)
T 3hpa_A 20 APNTSSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAEL----PETADEVLDLRGHLVIPGLVNTHHH 95 (479)
T ss_dssp ---------CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGS----CSCCSEEEECTTEEEEECEEECCCC
T ss_pred CCCCCCCCCCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccC----CCCCCeEEECCCCEEeeCceeHhhC
Confidence 4444556678999999985 5788878889999999999999999986654 3356799999999999999999999
Q ss_pred Cccccccccc--CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-----cCHHHHHHHHHHhC
Q 012333 89 TSQQLAKGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVSEMAKAVELLG 161 (466)
Q Consensus 89 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-----~~~~~~~~~~~~~g 161 (466)
+.++..++.. ...++.+|+... ++.......++.+........+++..|+|++.+... ........+....+
T Consensus 96 ~~~~~~~g~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g 174 (479)
T 3hpa_A 96 MYQSLTRAVPAAQNAELFGWLTNL-YKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIG 174 (479)
T ss_dssp GGGGGSCSCTTTTTCCHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHT
T ss_pred cchhcccccccCCCcchHHHHhhh-hhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeeccchhhHHHHHHHHHHhc
Confidence 9988887754 456677887543 333445556666666667788899999999988542 34556677777888
Q ss_pred CeEEeecccccCCC---CCCcccccCChHHHHHHHHHHHHHhccCC-CCCeEEEEeecccccCCHHHHHHHHHHHHHcCC
Q 012333 162 LRACLVQSTMDCGE---GLPASWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKT 237 (466)
Q Consensus 162 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~ 237 (466)
++............ ...................+....+.... .........++.....+.+.+.++...+.+.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~ 254 (479)
T 3hpa_A 175 MRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGV 254 (479)
T ss_dssp CEEEEEEEECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTTSCHHHHHHHHHHHHHHTC
T ss_pred chhhhhhheeeccccccCCCchhhhhhhhhHHHHHHHHHHHhhhhcccccceeEecccccccCCHHHHHHHHHHHHhcCC
Confidence 88765443332211 11111122222333344444444444332 344555567777788899999999999999999
Q ss_pred ccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccH
Q 012333 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPI 316 (466)
Q Consensus 238 ~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~ 316 (466)
.+.+|+.....+........ +...............+..+.|+.++++.+++++++.+..+..+|.+.... .+..+.
T Consensus 255 ~~~~h~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 332 (479)
T 3hpa_A 255 SLHTHLAENVNDIAYSREKF--GMTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGIAPV 332 (479)
T ss_dssp EEEEEESCSHHHHHC---------CHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCH
T ss_pred eEEeecccchHHHHHHHHHc--CCchHHHHhhhccccccceeeeeEecchhHHHHHHhcCCceeeccccccccccCccch
Confidence 99999877654433322222 223566667777777888999999999999999999999999999988766 677899
Q ss_pred HHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCccccccc
Q 012333 317 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEA 396 (466)
Q Consensus 317 ~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~ 396 (466)
+.+.+.++++++|||....++...++..++.+....... ..+.++|++++++++|.|||++||++ ++|+|++
T Consensus 333 ~~~~~~~~~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ls~~eal~~~T~~~A~~lgl~-~~G~I~~ 404 (479)
T 3hpa_A 333 KKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVG-------FGPDAMTAREALEIATLGGAKVLNRD-DIGALKP 404 (479)
T ss_dssp HHHHHHTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHH-------HCTTSCCHHHHHHHTTHHHHHHHTCS-SSSSCST
T ss_pred hHHHhcCCcEEeeccccccCCCccHHHHHHHHHHHHhhh-------ccccCCCHHHHHHHHHHHHHHHhCCC-CCccCCC
Confidence 999999999999999987766667777766655443321 12346999999999999999999995 5899999
Q ss_pred CCccCEEEEcCCC-CCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 397 GKKADMVVVDPFS-WPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 397 G~~ADlvv~d~~~-~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
||+|||||||.+. +...|.+||++.++|.. ..+|..|||+|++||+||+++++|+++++++.++..
T Consensus 405 G~~ADlvv~D~~~~~~~~~~~dp~~~lv~~~-~~~v~~tiV~G~~V~~dG~~~~~D~~~~~~~~~~~~ 471 (479)
T 3hpa_A 405 GMAADFAAFDLRQPLFAGALHDPVAALVFCA-PSQTAYTVVNGKVVVREGRLATLDLPPVIERHNALA 471 (479)
T ss_dssp TSBCCEEEEETTSGGGTTCTTSHHHHHHHSS-CCCCSEEEETTEEEEETTEECSSCHHHHHHHHHHHH
T ss_pred CCcCCEEEEcCCCccccCCccCHHHHhhccC-CCCceEEEECCEEEEECCcCCCCCHHHHHHHHHHHH
Confidence 9999999999983 44447788888776644 568999999999999999999999999998887654
No 10
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=4.7e-49 Score=389.11 Aligned_cols=417 Identities=16% Similarity=0.154 Sum_probs=327.4
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
|++++++|+.+. + ..+++++|+|+||||++|++..+ .++||++|++|+|||||+|+|+.++.+++.
T Consensus 11 m~~l~~~~~~~~--~---~~~~~~~v~I~~g~I~~Ig~~~~---------~~~iD~~g~~v~PGlID~H~H~~~~~~rg~ 76 (458)
T 4f0l_A 11 QHFIHARQALLP--D---GWAENVRIGIAGGVICSIETGVL---------AGPDDERQSVVVAGMANLHSHAFQYGMAGL 76 (458)
T ss_dssp CEEEEEEEEEET--T---EEEEEEEEEEETTEEEEEECSCC---------CCTTCEEEEEEEECEEEEEECGGGGGGTTS
T ss_pred hhHhhhcceecc--C---ccccCceEEEECCEEEEEeCCCc---------cccccCCCCEEccCceecccchhhhhhccc
Confidence 457788888763 2 35678999999999999998532 356999999999999999999999988887
Q ss_pred cC-----CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc--------------CHHHHHHHHH
Q 012333 98 AD-----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVE 158 (466)
Q Consensus 98 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~--------------~~~~~~~~~~ 158 (466)
.. +.++.+|+. ..|+....+++++.+......+.+++++||||+.++... ......++..
T Consensus 77 ~~~~~~~~~~~~~w~~-~~~~~~~~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~ 155 (458)
T 4f0l_A 77 AERRGPSADSFWSWRE-IMYKFALTMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAAT 155 (458)
T ss_dssp SCBCCSCSSTTHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHH
T ss_pred ccccccCCCcHHHHHH-HhhhhhhhCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHHHH
Confidence 65 778899975 567777778888888888888899999999999986321 1456788888
Q ss_pred HhCCeEEeecccccCCC-C-CCccc----ccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHH
Q 012333 159 LLGLRACLVQSTMDCGE-G-LPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (466)
Q Consensus 159 ~~g~~~~~~~~~~~~~~-~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a 232 (466)
..|++..+....+..+. + ..+.. .........+...+..+.+.. ...+.+.++++..+..+++.+.++++++
T Consensus 156 ~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~a 233 (458)
T 4f0l_A 156 TAGMGLTLLPVFYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEG--FEGAVLGVAPHSLRAVTPDELDSVTQLL 233 (458)
T ss_dssp HHTCEEEEEEEECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTT--CTTCEECBEECBTTTSCHHHHHHHTTSS
T ss_pred HcCCeEEEecchhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhcc--CCceEEEEecCCcCcCCHHHHHHHHHHh
Confidence 99999887655443210 0 01100 112233333333343333332 3456666788888999999999999988
Q ss_pred HHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-c
Q 012333 233 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-L 311 (466)
Q Consensus 233 ~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~ 311 (466)
+ ++++++|+.+...+........+. .+.+.+...+.++.+.++.|+.++++++++++++.|+.+++||.+++.+ .
T Consensus 234 ~--g~~v~~H~~e~~~~~~~~~~~~g~--~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~l~~ 309 (458)
T 4f0l_A 234 P--DAPVHIHVAEQVKEVEDCIAWSGK--RPVEWLLDHQDVTARWCLIHATHMSDEETKHMAKAGAIAGLCPVTEANLGD 309 (458)
T ss_dssp T--TSCEEEEESCSHHHHHHHHHHHSS--CHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTC
T ss_pred c--CCCEEEEeCCCHHHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHHHcCCeEEECccccccccC
Confidence 8 999999999888777766665554 3667888888889999999999999999999999999999999999877 6
Q ss_pred CCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcc
Q 012333 312 GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (466)
Q Consensus 312 ~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~ 391 (466)
+.++++.+++.|+++++|||.. ...+++.+++.+....+........+..+++++++++++++|.+||+++|+ ++
T Consensus 310 ~~~~~~~~~~~Gv~v~lgtD~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A~~lg~--~~ 384 (458)
T 4f0l_A 310 GTFNATEFAAAGGKFGIGSDSN---VLIGIGDELRQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLGGNIAMGR--PE 384 (458)
T ss_dssp CCCCHHHHHHTTCEEEECCBTT---SSCCHHHHHHHHHHHHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHHHHTTC--TT
T ss_pred CCccHHHHHHCCCeEEEECCCC---CCCCHHHHHHHHHHHHhhhccCccccCCcccCCHHHHHHHHHHHHHHHhCC--CC
Confidence 7889999999999999999964 346899999887665543222222223345799999999999999999999 37
Q ss_pred cccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 392 GSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 392 G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
|+|++||.|||||+|.+.....|.++++..+++.... +|..||++|++||++|++ ++++++.+++++..
T Consensus 385 G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~-~v~~v~v~G~~v~~~g~~--~d~~~i~~~~~~~~ 453 (458)
T 4f0l_A 385 DGLKKGASADFVSLDVERLPHAKGDVVLDGWIFAGRA-HVCDVWVRGVKQVEGGRH--RLRDEAERAFQKAL 453 (458)
T ss_dssp CSSSTTSBCCEEEEECTTSTTCCHHHHHHHHHHTSCC-EEEEEEETTEEEEETTEE--TTHHHHHHHHHHHH
T ss_pred CcCCCCCcCCEEEEeCCCCccCCcccHHHhCeEcCCC-CceEEEECCEEEEECCEe--CCHHHHHHHHHHHH
Confidence 9999999999999999977666777888888888777 999999999999999998 48999998887654
No 11
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=4.1e-48 Score=380.38 Aligned_cols=417 Identities=21% Similarity=0.292 Sum_probs=301.8
Q ss_pred cccceEEEEccEEEeec-CCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccc
Q 012333 16 GSSSTMILHNAVIVTMD-KESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d-~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~ 94 (466)
..|.+++|+|++|++++ +...++.+++|+|+||||++|++.... +.++.++||++|++|+|||||+|+|+....+
T Consensus 6 ~~m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~----~~~~~~viD~~G~~v~PGlID~H~H~~~~~~ 81 (439)
T 2i9u_A 6 KDINLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPD----KYKGNPIIDFRNNIIIPGMNDLHAHASQYKN 81 (439)
T ss_dssp ---CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCG----GGTTSCEEEEEEEEEEECEEEEEEEGGGGGG
T ss_pred CCcccEEEEeeEEEecCCccceEEeccEEEEECCEEEEecccccc----cCCCceEEcCCCeEEEecceecccccchHhh
Confidence 45678999999999876 223456788999999999999964321 1124579999999999999999999988777
Q ss_pred ccccCCCCchHhhhhccccccCCC-ChhHHHHHHHHHHHHHHhcCceeeeecCccCH---HHHHHHHHHhCCeEEeeccc
Q 012333 95 KGIADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQST 170 (466)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~---~~~~~~~~~~g~~~~~~~~~ 170 (466)
++...+.++.+|+....|+.+..+ ++++.+......+..++++||||+++++.... ....++..+.|++.......
T Consensus 82 ~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~ 161 (439)
T 2i9u_A 82 LGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVN 161 (439)
T ss_dssp TTCCCSSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEECEE
T ss_pred hCCcCCCCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEccccccchHHHHHHHHHHcCCEEEEEeee
Confidence 776666788899876656544333 33344444445678899999999999875443 44566677788887654443
Q ss_pred ccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 012333 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (466)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (466)
.... .+..+ ............+.++++... .+.+++.+.++.....+++.+.++++.|++.|+++++|+.+...+.
T Consensus 162 ~~~~--~p~~~-~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~ 237 (439)
T 2i9u_A 162 MDYN--CPDYL-TENYITSLNDTEEIILKYKDK-SNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEI 237 (439)
T ss_dssp CCSS--CCTTS-CCCHHHHHHHHHHHHHHHTTT-CSSEEECBEECCGGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHHH
T ss_pred cccc--CCccc-chhHHHHHHHHHHHHHHHhCC-CCceEEEEecCCcCcCCHHHHHHHHHHHHhcCCcEEEeecCChHHH
Confidence 3211 12111 112223445555666665432 3456666666666677899999999999999999999998876655
Q ss_pred HHHHhhcCCCCchHHHHhhhccCC-CCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEE
Q 012333 251 QVVMDTRKVDHGTVTFLDKIEFLQ-NNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSL 328 (466)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~ 328 (466)
.......+......+.+...+..+ .+.++.|+.+++++.++++++.|+.+.+||.+++.. .+.++++.+++.|+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p~~~~~l~~~~~~~~~~~~~Gv~~~l 317 (439)
T 2i9u_A 238 AVVKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIVHCPTSNFNLGSGMMPVRKYLNLGINVVL 317 (439)
T ss_dssp HHHHHHCTTCSSHHHHHHHTTCSSSSCEEEEECCSCCHHHHHHHHHTTCEEEECHHHHHHTTCCCCCHHHHHHTTCEEEE
T ss_pred HHHHHHhCCCCCHHHHHHHcCCCCCCCeEEEEEecCCHHHHHHHHHcCCEEEECccchhhcccccCCHHHHHHCCCcEEE
Confidence 555554443223556666777777 788899999999999999999999999999988765 457899999999999999
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC
Q 012333 329 GTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (466)
Q Consensus 329 gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~ 408 (466)
|||+++ +...+++.+++.+...++...... .....++|++++++++|.|||+++| ++|+|++||+|||||+|.+
T Consensus 318 gtD~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ls~~~al~~~T~~~A~~lg---~~Gsl~~G~~ADlvvld~~ 391 (439)
T 2i9u_A 318 GSDISA-GHTCSLFKVIAYAIQNSKIKWQES--GKKDMFLSTSEAFYMATKKGGSFFG---KVGSFEEGYDFDALVINDS 391 (439)
T ss_dssp CCCBTT-BCCSCHHHHHHHHHHHHHHHHHHT--TSCSCCCCHHHHHHHHTHHHHTTTS---SCSSCSTTCBCCEEEECCT
T ss_pred ecCCCC-CCCcCHHHHHHHHHHHhccccccc--cCCCCCCCHHHHHHHHHHHHHHHhc---cCCccCCCCccCEEEEeCC
Confidence 999976 345689999887765543211110 1223569999999999999999999 4799999999999999999
Q ss_pred CCCCC--CcCCcccceecccCCCCeeEEEEccEEEEECCe
Q 012333 409 SWPMV--PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 446 (466)
Q Consensus 409 ~~~~~--~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 446 (466)
.+... |..+++..+++.....+|..||++|++||++++
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~~~ 431 (439)
T 2i9u_A 392 NLYPEDYDLTERLERFIYLGDDRNIMKRYVCGNEIFGPKF 431 (439)
T ss_dssp TSCGGGSCHHHHHHHHHHHCCGGGEEEEEETTEEEC----
T ss_pred CccccCCCccCHHHHheecCCCCCeeEEEECCEEEeeCCC
Confidence 55433 345555555555556799999999999998764
No 12
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=1.9e-47 Score=378.41 Aligned_cols=418 Identities=21% Similarity=0.314 Sum_probs=309.0
Q ss_pred eEEEEccEEEeecCC-----------cceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccC
Q 012333 20 TMILHNAVIVTMDKE-----------SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88 (466)
Q Consensus 20 ~~lI~n~~i~~~d~~-----------~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H 88 (466)
-++|.+|+|+++.++ ..++.+++|+|+||||++|++..+.+..+ +++++||++|++|+|||||+|+|
T Consensus 4 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~--~~~~viD~~G~~v~PG~ID~H~H 81 (475)
T 2ood_A 4 TTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAH--PGVEITHIKDRIIVPGFIDGHIH 81 (475)
T ss_dssp CEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHS--TTCEEEEEEEEEEEECEEEEEEE
T ss_pred cceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhcccc--CCCeEEeCCCcEEecceecCccc
Confidence 467889999986541 24567899999999999999754332111 25689999999999999999999
Q ss_pred CcccccccccCCCCchHhhhhccccccCCC-ChhHHHHHHHHHHHHHHhcCceeeeecCccCH---HHHHHHHHHhCCeE
Q 012333 89 TSQQLAKGIADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRA 164 (466)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~---~~~~~~~~~~g~~~ 164 (466)
+.++.+++.. +.++.+|+....|+.+... +.++.+......+..++++||||+++++.... ....++....|++.
T Consensus 82 l~~~~~~g~~-~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~ 160 (475)
T 2ood_A 82 LPQTRVLGAY-GEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFTSSSPVATEELFEEASRRNMRV 160 (475)
T ss_dssp GGGTTCTTCC-SCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSSHHHHHHHHHHHHHHTCCE
T ss_pred HHhHhhcCCC-CCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEecccCchhHHHHHHHHHHcCCeE
Confidence 9877766543 4467889887766655443 34445555566788899999999999865433 45566777788887
Q ss_pred EeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHc-CCccceec
Q 012333 165 CLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHV 243 (466)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~-~~~v~~H~ 243 (466)
..+......+ .+.. ........+....+.++.+.. .+.++..+.++..+.++++.+.++++.++++ |+++++|+
T Consensus 161 ~~g~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~g~~v~~H~ 235 (475)
T 2ood_A 161 IAGLTGIDRN--APAE-FIDTPENFYRDSKRLIAQYHD--KGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTHI 235 (475)
T ss_dssp EECCEECCSS--SCTT-TCCCHHHHHHHHHHHHHHHTT--BTTEEEEEEECBGGGCCHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred EEEeeecccC--CCcc-cccCHHHHHHHHHHHHHHhcc--CCceEEEEeccccCcCCHHHHHHHHHHHHhCCCCcEEEee
Confidence 6544333221 1111 112334455555666666543 3457777788888889999999999999999 99999999
Q ss_pred cCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHc
Q 012333 244 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHA 322 (466)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~ 322 (466)
.+...+........+......+.++..+.++.+.++.|+.++++++++++++.|+.+.+||.+++.+ .+.++++.+++.
T Consensus 236 ~e~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~~~~~g~~~~~~P~~~~~l~~~~~~~~~~~~~ 315 (475)
T 2ood_A 236 SENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAAVVFCPCSNLFLGSGLFRLGRATDP 315 (475)
T ss_dssp SCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHTCT
T ss_pred CCChHHHHHHHHHcCCCccHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCEEEEChhhhhhcccCcCCHHHHHhC
Confidence 8876665555554443344677778878788888999999999999999999999999999988765 578899999999
Q ss_pred CCc--EEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCC----------CCCCCCCHHHHHHHHhHHHHHHcCCCCc
Q 012333 323 DIC--VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT----------TDPAALPAETVLRMATINGAKSVLWDND 390 (466)
Q Consensus 323 gi~--~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ls~~~al~~~T~~~A~~lgl~~~ 390 (466)
|++ +++|||+++. ...+++..++.+....+.......+. ....++|++++++++|.|||+++|++++
T Consensus 316 Gv~~~~~lgTD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~ 394 (475)
T 2ood_A 316 EHRVKMSFGTDVGGG-NRFSMISVLDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRGFWSVTLGGAEGLYIDDK 394 (475)
T ss_dssp TSCCEEEECCCBTTB-SCCCHHHHHHHHHHHHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHHHHHTTHHHHHHTTCTTT
T ss_pred CCCCcEEEEccCCCC-CCcCHHHHHHHHHHHhcccchhccCCcccccccccccccCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 999 9999999763 34578888887654432100000000 0014699999999999999999999888
Q ss_pred ccccccCCccCEEEEcCCCCCCCC------------------cCCcccceecccCCCCeeEEEEccEEEEECCe
Q 012333 391 IGSLEAGKKADMVVVDPFSWPMVP------------------VHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 446 (466)
Q Consensus 391 ~G~i~~G~~ADlvv~d~~~~~~~~------------------~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 446 (466)
+|+|++||+|||||+|.+.+...+ ..+|+..+++.....+|..||++|++||++.+
T Consensus 395 ~GsL~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~s~~~~~~~~~p~~~~~~~~~~~~V~~t~v~G~~v~~~~~ 468 (475)
T 2ood_A 395 LGNFEPGKEADFVALDPNGGQLAQPWHQSLIADGAGPRTVDEAASMLFAVMMVGDDRCVDETWVMGKRLYKKSE 468 (475)
T ss_dssp SSSCCTTSBCCEEEECTTCSSTTHHHHHTTC--CCSCCSHHHHHHHHHHHHHHCCGGGEEEEEETTEEEEECC-
T ss_pred ceeeCCCCccCEEEEeCCCccccccccccccccccccccccchhhHHHHHHhhCCCCCeeEEEECCEEEEECCC
Confidence 999999999999999999654322 23456666666667899999999999999875
No 13
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=100.00 E-value=1e-47 Score=378.07 Aligned_cols=417 Identities=19% Similarity=0.255 Sum_probs=323.8
Q ss_pred EEccEEEeecCCcceeeceEEEE-ECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccC--
Q 012333 23 LHNAVIVTMDKESRVFRNGGVFV-VQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-- 99 (466)
Q Consensus 23 I~n~~i~~~d~~~~~~~~~~v~I-~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~-- 99 (466)
+..+.+++++ .++++++|.| +||+|++|++..+ ..+++|++| +|+|||||+|+|+.++.+++...
T Consensus 4 ~~~~~~~~~~---~~~~~~~v~i~~~g~I~~ig~~~~--------~~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~ 71 (453)
T 3mdu_A 4 IFAERALLPE---GWARNVRFEISADGVLAEIRPDAN--------ADGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVA 71 (453)
T ss_dssp EEEEEEEETT---EEEEEEEEEECTTSBEEEEESSCC--------CTTSEECSS-CEEECEEEEEECGGGGGGTTTTCCC
T ss_pred cchhheecCC---ceecCeEEEEecCCEEEEecCCCC--------cccccccCC-cccccceecccchHHHhhccccccc
Confidence 3455666543 3678899999 8999999998643 224679999 99999999999999999998764
Q ss_pred ---CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc--------------CHHHHHHHHHHhCC
Q 012333 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVELLGL 162 (466)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~--------------~~~~~~~~~~~~g~ 162 (466)
+.++.+|+. ..|+....+++++.+......+.+++++||||+.++... ......++..+.|+
T Consensus 72 ~~~~~~l~~wl~-~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gi 150 (453)
T 3mdu_A 72 GNPNDSFWTWRE-LMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGI 150 (453)
T ss_dssp SSTTCCHHHHHH-HHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTC
T ss_pred cCCCCcHHHHHH-HHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCC
Confidence 567899975 468888888998888888889999999999999985321 13567888899999
Q ss_pred eEEeecccccCCC-C-CCccc----ccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcC
Q 012333 163 RACLVQSTMDCGE-G-LPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (466)
Q Consensus 163 ~~~~~~~~~~~~~-~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 236 (466)
+..+....++... + .++.. .....+..++...+..+.+... .. .+.++++..+.++++.++++++.|+ .|
T Consensus 151 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~p~~~~~~~~e~l~~~~~~A~-~g 226 (453)
T 3mdu_A 151 GLTLLPVLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAA--GH-SLGLCFHSLRAVTPQQIATVLAAGH-DD 226 (453)
T ss_dssp EEEEEECBCCBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHH--TC-EECEEEEETTTSCHHHHHHHHTSSC-TT
T ss_pred eEEEecchhccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcC--CC-eEEEecCCCCcCCHHHHHHHHHHHh-cC
Confidence 9887665554321 1 11111 0123333444444444443322 23 5557888889999999999999999 99
Q ss_pred CccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCcc
Q 012333 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAP 315 (466)
Q Consensus 237 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~ 315 (466)
+++++|+.+...+........+. .+.+.+...+.++.+.++.|+.++++++++++++.|+.+++||.+++++ .+.+|
T Consensus 227 ~~v~~H~~e~~~e~~~~~~~~g~--~~v~~l~~~g~~~~~~~~~H~~~~~~~~i~~la~~g~~v~~~P~sn~~lg~g~~p 304 (453)
T 3mdu_A 227 LPVHIHIAEQQKEVDDCQAWSGR--RPLQWLYENVAVDQRWCLVHATHADPAEVAAMARSGAVAGLCLSTEANLGDGIFP 304 (453)
T ss_dssp SCEEEEESCSHHHHHHHHHHHSS--CHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCC
T ss_pred CCEEEEeCCCHHHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEEcCCCCHHHHHHHHHcCCEEEECchhHhhcCCCCCC
Confidence 99999999888777766665554 3677888888899999999999999999999999999999999999877 67899
Q ss_pred HHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCC-CCCCCCCHHHHHHHHhHHHHHHcCCCCccccc
Q 012333 316 IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT-TDPAALPAETVLRMATINGAKSVLWDNDIGSL 394 (466)
Q Consensus 316 ~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i 394 (466)
++.++++|+++++|||++. ..+++.+++.+....+......... ...++++++++++++|.+||+++|+ ++|+|
T Consensus 305 ~~~~~~~Gv~v~lgtD~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~~~--~~G~l 379 (453)
T 3mdu_A 305 ATDFLAQGGRLGIGSDSHV---SLSVVEELRWLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQ--PIGSL 379 (453)
T ss_dssp HHHHHHTTCEEEECCBTCS---CCCHHHHHHHHHHHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHHHHHHHTS--SCSSC
T ss_pred HHHHHHCCCEEEEECCCCC---CCCHHHHHHHHHHHHhhhccCCccccCcccCCCHHHHHHHHHHHHHHHhCC--CCCcc
Confidence 9999999999999999753 3589999988766544321111111 1224799999999999999999999 58999
Q ss_pred ccCCccCEEEEcCCCCCCC--CcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHhhc
Q 012333 395 EAGKKADMVVVDPFSWPMV--PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLMN 465 (466)
Q Consensus 395 ~~G~~ADlvv~d~~~~~~~--~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~~~ 465 (466)
++|+.|||||+|.+..... +.++++..+++.....+|..||++|++||++|+++ +++++.+++++...+
T Consensus 380 ~~G~~AD~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~--~~~~i~~~~~~~~~~ 450 (453)
T 3mdu_A 380 AVGRRADLLVLDGNDPYLASAEGDALLNRWLFAGGDRQVRDVMVAGRWVVRDGRHA--GEERSARAFVQVLGE 450 (453)
T ss_dssp CTTSBCCEEEECTTCHHHHTCCHHHHHHHHHHHCCGGGEEEEEETTEEEEBTTBCT--THHHHHHHHHHHHHH
T ss_pred CCCCcCCEEEEeCCCccccCCCccChHHHheeeCCCCCeeEEEECCEEEEECCccC--CHHHHHHHHHHHHHH
Confidence 9999999999999843322 55677777777777789999999999999999985 899999888876543
No 14
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=100.00 E-value=5.3e-48 Score=375.80 Aligned_cols=394 Identities=27% Similarity=0.422 Sum_probs=300.8
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|+++++.. ..+++|+|+||||++|++.. ++++ ||++|++|+|||||+|+|+.....++...+
T Consensus 1 ~li~n~~v~~~~~~~--~~~~~v~I~~g~I~~vg~~~--------~~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~ 69 (406)
T 1p1m_A 1 MIIGNCLILKDFSSE--PFWGAVEIENGTIKRVLQGE--------VKVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAED 69 (406)
T ss_dssp CEEEEEEECCSTTSC--CEEEEEEEETTEEEEEEESS--------CCCS-EECTTEEEEECEEEEEECGGGGGGTTSSCS
T ss_pred CEEEccEEEecCccc--cccceEEEECCEEEEeeCCC--------Ccce-ecCCCcEEeecccchhhccchhhhccccCC
Confidence 479999999876432 46789999999999998742 2446 999999999999999999988877777677
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCCCCCCcc
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (466)
.++.+|+....|+.....+.++.+......+..++++||||+++++. ......++....|++.+......+.+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~-~~~~~~~~~~~~g~r~~~~~~~~~~~~----- 143 (406)
T 1p1m_A 70 LSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYF-HEEWIAKAVRDFGMRALLTRGLVDSNG----- 143 (406)
T ss_dssp CCHHHHHHTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEES-SHHHHHHHHHHHCCEEEEEEEECCBTT-----
T ss_pred CCHHHHHHhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEechh-CHHHHHHHHHHcCCEEEEEcccccCCC-----
Confidence 78899999888888777777777766666778899999999999763 455666777778988876544433210
Q ss_pred cccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh--hcC
Q 012333 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD--TRK 258 (466)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~--~~~ 258 (466)
.....+....+.++.+.... +.++..+.++.++..+++.+.++++.+++.|+++++|+.+.......... ..+
T Consensus 144 ----~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g 218 (406)
T 1p1m_A 144 ----DDGGRLEENLKLYNEWNGFE-GRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDILNIG 218 (406)
T ss_dssp ----BCTTHHHHHHHHHHHHTTGG-GTEEEEEEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHHHTTT
T ss_pred ----CHHHHHHHHHHHHHHhhCCC-CcEEEEEecCccCcCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHHHhhhCC
Confidence 11123333444555554322 45676677777777899999999999999999999999754322111111 000
Q ss_pred CCCchHHHHhhhccCCCCeeEEEee---cCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCC
Q 012333 259 VDHGTVTFLDKIEFLQNNLLSAHTV---WVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (466)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~H~~---~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~ 334 (466)
+...+... .++.|+. +++++++++++ .+||.++++. .+.++++.+++.|+++++|||+++
T Consensus 219 --------~~~~g~~~--~~~~H~~~~~~~~~~~~~~~~------~~~p~~~~~~~~~~~~~~~~~~~Gv~~~lgtD~~~ 282 (406)
T 1p1m_A 219 --------LKEVKTIA--AHCVHLPERYFGVLKDIPFFV------SHNPASNLKLGNGIAPVQRMIEHGMKVTLGTDGAA 282 (406)
T ss_dssp --------TTTSCEEE--EECTTCCGGGTTTTTTSSEEE------EECHHHHHHTTCCCCCHHHHHHTTCEEEECCCCTT
T ss_pred --------HhHcCcce--eEeeeccCcccCCHHHHHHHH------HhCcHHHhhcCCCcCcHHHHHhCCCeEEEECCCCc
Confidence 11122221 5688999 99988876544 7899877665 567899999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCC
Q 012333 335 SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (466)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~ 414 (466)
.+...+++.+++.+....+.. ...++|++++++++|.|||+++|+++ |+|++|++|||||+|.+.+...|
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~--------~~~~ls~~~al~~~T~~~A~~lgl~~--G~l~~G~~ADlvv~d~~~~~~~~ 352 (406)
T 1p1m_A 283 SNNSLNLFFEMRLASLLQKAQ--------NPRNLDVNTCLKMVTYDGAQAMGFKS--GKIEEGWNADLVVIDLDLPEMFP 352 (406)
T ss_dssp TTSCCCHHHHHHHHHHHHHTT--------CTTSSCHHHHHHHHTHHHHHHHTCSC--SSCCTTSBCCEEEEECCSGGGCS
T ss_pred CCCCCCHHHHHHHHHHHhccc--------CCCCCCHHHHHHHHHHHHHHHhCCCC--cccCCCCcccEEEEeCCccccCC
Confidence 665678999988877665421 13469999999999999999999964 99999999999999999766667
Q ss_pred cCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHHh
Q 012333 415 VHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 463 (466)
Q Consensus 415 ~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 463 (466)
.++++..+.+.....+|..||++|++|| +|+++.++++++.++.++..
T Consensus 353 ~~~~~~~~~~~~~~~~v~~v~v~G~~v~-~g~~~~~d~~~~~~~~~~~~ 400 (406)
T 1p1m_A 353 VQNIKNHLVHAFSGEVFATMVAGKWIYF-DGEYPTIDSEEVKRELARIE 400 (406)
T ss_dssp GGGHHHHHHHTCCSCCSEEEETTEEEEE-TTBCTTSCHHHHHHHHHHHH
T ss_pred ccChHHHheEecCCCCceEEEECCEEEE-CCeeCCCCHHHHHHHHHHHH
Confidence 7777777666666789999999999999 99999999999998887654
No 15
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=100.00 E-value=6.2e-48 Score=376.32 Aligned_cols=401 Identities=19% Similarity=0.255 Sum_probs=307.4
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|+++++ ++++++|+| ||+|++|++..+.+..+ ++.++||++|++|+|||||+|+|+.++.+++....
T Consensus 2 ~~i~~~~v~~~~~---~~~~~~v~i-~g~I~~Vg~~~~~~~~~--~~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~ 75 (427)
T 3v7p_A 2 RIIKPFAILTPQT---IIQDKAVAF-DKKIEAIDTVENLIKKY--PNAAVEHDENSLLLPGFANPHLHLEFSANKATLQY 75 (427)
T ss_dssp EEEEEEEEECSSS---EEESCEEEE-SSBEEEEECHHHHHHHC--TTSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCC
T ss_pred EEEECCEEEcCCC---EEeCcEEEE-CCEEEEecChhhhcccc--CCceEEeCCCCEEecCEeecccCcchhhccccccc
Confidence 6899999998764 778999999 99999999865543322 35689999999999999999999999999988888
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCCCCCCcc
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (466)
.++.+|+....++.+. .++++.+........+++++|||++.++.... ...++....|++.......... .+
T Consensus 76 ~~l~~wl~~~~~~~~~-~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~--~~~~a~~~~Gir~~~~~~~~~~----~~- 147 (427)
T 3v7p_A 76 GDFIPWLYSVIRHRED-LLPLCDGACLEQTLSSIIQTGTTAIGAISSYG--EDLQACIDSALKVVYFNEVIGS----NA- 147 (427)
T ss_dssp SSHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHTTEEEEEEEESSS--TTHHHHHHBSSEEEEEEEECBC----CG-
T ss_pred CCHHHHHHHHHHhHHh-cCHHHHHHHHHHHHHHHHHhCCEEEEEecCcH--HHHHHHHhcCCeEEEeccccCC----Ch-
Confidence 8999999888777653 44444566666778889999999999975432 2357888999998776554321 11
Q ss_pred cccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCC-
Q 012333 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV- 259 (466)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~- 259 (466)
........+..+.++.........+...++++.++.++++.+++++++|+++++++++|+.+...+........+.
T Consensus 148 ---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~ 224 (427)
T 3v7p_A 148 ---ATADVMYASFLERFHQSKKHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEF 224 (427)
T ss_dssp ---GGHHHHHHHHHHHHHHHHTTCBTTEEEEEEECCTTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHH
T ss_pred ---hhhhHHHHHHHHHHHHhhhccCCceEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcc
Confidence 1223334444555555555556788888999999999999999999999999999999999988777666553331
Q ss_pred ---------CCchHH-HHhhhcc-CCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEE
Q 012333 260 ---------DHGTVT-FLDKIEF-LQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVS 327 (466)
Q Consensus 260 ---------~~~~~~-~~~~~~~-~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~ 327 (466)
...+.. ..+.++. ++.+.++.|+.++++++++++++.|+.+++||.+++.. .+.+|++.+ .|++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~~~~~~~~~~~~--~Gv~v~ 302 (427)
T 3v7p_A 225 AKFFKEFLNQTRPVNDTKSFLELFKELHTLFVHMVWANEEEIQTIASYNAHIIHCPISNRLLGNGVLDLEKI--KSIPYA 302 (427)
T ss_dssp HHHHHHHTCCCSCSSCHHHHHHTTTTSEEEEEECTTCCHHHHHHHHHSEEEEEECHHHHHHTTCCCCCTTTT--TTSCEE
T ss_pred hhhhhhhccCCCcccCHHHHHhhhcCCCEEEEECCCCCHHHHHHHHHcCCEEEECHHHHHHhcCCCCCHHHH--CCCeEE
Confidence 011111 2222333 56788999999999999999999999999999999877 567888888 999999
Q ss_pred EccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcC
Q 012333 328 LGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDP 407 (466)
Q Consensus 328 ~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~ 407 (466)
+|||+...+...+++.+++.+....+. .+..++++++++++|.+||+++|++ +|+|++|+.|||||+|.
T Consensus 303 lgtD~~~~~~~~~~~~~~~~a~~~~~~---------~~~~~~~~~~~~~~t~~~a~~~g~~--~g~l~~G~~Ad~~~~d~ 371 (427)
T 3v7p_A 303 IATDGLSSNYSLNMYEELKAALFVHPN---------KEATTFAKELIIRATKAGYDALGFE--GGEIAVGKDADMQLIDL 371 (427)
T ss_dssp ECCCCTTSCSCCCHHHHHHHHHHHSTT---------SCHHHHHHHHHHHHTHHHHHHHTCS--CSSCCTTSBCCEEEEEC
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHhccC---------CCcccCHHHHHHHHHHHHHHHhCCC--CceeCCCCccCEEEEcC
Confidence 999987666678999999988766532 1223678999999999999999995 79999999999999999
Q ss_pred CCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHH
Q 012333 408 FSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGR 454 (466)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~ 454 (466)
+.....|.+++...+. ...+|..||++|++||++|+++.....+
T Consensus 372 ~~~~~~~~~~~~~~~~---~~~~v~~v~v~G~~v~~~g~~~~~~~~~ 415 (427)
T 3v7p_A 372 PEGLTNVEDLYLHVIL---HTTKPKKVYIQGEEHVREAENLYFQSHH 415 (427)
T ss_dssp CTTCCCGGGHHHHHHH---HCSSCSEEEETTEEEEC---CCCBC---
T ss_pred CCccCCCccchHHHhc---ccCCccEEEECCEEEEECCcccCCcccc
Confidence 8554445454443322 2478999999999999999988765543
No 16
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=100.00 E-value=4.7e-41 Score=328.38 Aligned_cols=379 Identities=22% Similarity=0.260 Sum_probs=243.2
Q ss_pred cceEEEEc-cEEEeecCCc----------ceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccc
Q 012333 18 SSTMILHN-AVIVTMDKES----------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTH 86 (466)
Q Consensus 18 ~~~~lI~n-~~i~~~d~~~----------~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H 86 (466)
.+|++|+| ++|+|+++.. ..+.+++|+|+||||++|++..+. ... +.+++||++|++|+|||||+|
T Consensus 4 ~~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~-~~~--~~~~viD~~G~~v~PGfID~H 80 (421)
T 2bb0_A 4 QIDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAE-AGY--EADEIIDCSGRLVTPGLVDPH 80 (421)
T ss_dssp EEEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTTT-TTC--EEEEEEECTTCEEEECEEECC
T ss_pred cccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEeccccc-ccC--CCCeEEeCCCCEeccCeeccC
Confidence 36899999 9999876432 345678999999999999975310 000 135799999999999999999
Q ss_pred cCCcccccccccCCCCchHhhhhcccc--------------ccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc--CH
Q 012333 87 VHTSQQLAKGIADDVDLMTWLHDRIWP--------------YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HV 150 (466)
Q Consensus 87 ~H~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~--~~ 150 (466)
+|+.....+. ..+..|+.+..|. .....+.++.+.........++++|||++.++... ..
T Consensus 81 ~H~~~~~~~~----~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~ 156 (421)
T 2bb0_A 81 THLVFGGSRE----KEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEK 156 (421)
T ss_dssp BCCCCCSCCG----GGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSCCSH
T ss_pred cCccccccch----HHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccccCcCc
Confidence 9986533221 1122333221111 00112344444445556788999999999885321 11
Q ss_pred H---HHHHHH----HHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHH
Q 012333 151 S---EMAKAV----ELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (466)
Q Consensus 151 ~---~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 223 (466)
. ...++. ...+++....... .+..++.+. ......+......++.+...+ .....-........+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~e 230 (421)
T 2bb0_A 157 ETELKQLRVAKKLHESQPVDLVSTFMG---AHAIPPEYQ-NDPDDFLDQMLSLLPEIKEQE--LASFADIFTETGVFTVS 230 (421)
T ss_dssp HHHHHHHHHHHHHHHHSSSEEEEEEEE---ESSCCGGGT-TCHHHHHHHHHTTHHHHHHTT--CCSEEEEBBCTTSBCHH
T ss_pred cchHHHHHHHHHHHhhcCceEEEEeec---cccCChhhc-ccHHHHHHHHHHhhHHhhccC--ccccccccCCcCCCCHH
Confidence 1 122222 2334554321110 011122111 111122222111222222111 11111111222345789
Q ss_pred HHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEEC
Q 012333 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~ 303 (466)
.+.++++.+++.|+++.+|+.+.... ...+.....+ ...+.|+.++++++++++++.|+.+++|
T Consensus 231 ~l~~~~~~a~~~g~~v~~H~~~~~~~------------~~~~~~~~~g----~~~~~H~~~~~~~~i~~~~~~g~~~~~~ 294 (421)
T 2bb0_A 231 QSRRYLQKAAEAGFGLKIHADEIDPL------------GGAELAGKLK----AVSADHLVGTSDEGIKKLAEAGTIAVLL 294 (421)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSSCC------------SHHHHHHHTT----CSEEEECTTCCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEecccccc------------CHHHHHHHcC----CcEEhhhhcCCHHHHHHHHHcCCeEEEC
Confidence 99999999999999999998653211 1222222222 2458899999999999999999999999
Q ss_pred ccchhhc--cCCccHHHHHHcCCcEEEccCCCC-CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHH
Q 012333 304 PASAMRM--LGFAPIKEMLHADICVSLGTDGAP-SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 380 (466)
Q Consensus 304 p~~~~~~--~~~~~~~~~~~~gi~~~~gsD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~ 380 (466)
|.+++.. .+..+++.++++|+++++|||+++ .++..+++..++.+.... ++|++++|+++|.|
T Consensus 295 p~~~~~l~~~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~--------------~ls~~eal~~~T~~ 360 (421)
T 2bb0_A 295 PGTTFYLGKSTYARARAMIDEGVCVSLATDFNPGSSPTENIQLIMSIAALHL--------------KMTAEEIWHAVTVN 360 (421)
T ss_dssp HHHHHHTTCCCCCCHHHHHHTTCCEEECCCBBTTTBCCCCHHHHHHHHHHHS--------------CCCHHHHHHHTTHH
T ss_pred CchhhhhcccccchHHHHHHCCCeEEEeCCCCCCCCcccCHHHHHHHHhccc--------------CCCHHHHHHHHHHH
Confidence 9988654 467899999999999999999865 334568888888654322 49999999999999
Q ss_pred HHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEEC-Ceee
Q 012333 381 GAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN-KKIL 448 (466)
Q Consensus 381 ~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~-g~~~ 448 (466)
||+++|+++++|+|++||+|||||+|.+++ .+ +.+.....+|..||++|++||+. |+++
T Consensus 361 ~A~~lg~~~~~Gsl~~Gk~ADlvvld~~~~-----~~----~~~~~~~~~v~~t~v~G~~v~~~~g~~~ 420 (421)
T 2bb0_A 361 AAYAIGKGEEAGQLKAGRSADLVIWQAPNY-----MY----IPYHYGVNHVHQVMKNGTIVVNREGAIL 420 (421)
T ss_dssp HHHHTTCTTTSSCCSTTSBCCEEEESSSST-----TH----HHHSCSSCCEEEEEETTEEEEEC-----
T ss_pred HHHHhCccCCccccCCCCcCCEEEECCccc-----cc----CHhHcCCCceEEEEECCEEEEeCCcccc
Confidence 999999988899999999999999999833 22 12223346899999999999985 6654
No 17
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=100.00 E-value=1.7e-42 Score=339.40 Aligned_cols=377 Identities=15% Similarity=0.180 Sum_probs=259.1
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
+++++|+|++|++++ .+++|+|+||+|++|++..+. +..++++||++|++|+|||||+|+|+.....++.
T Consensus 7 ~~~~li~n~~v~~~~------~~~~v~I~~g~I~~vg~~~~~----~~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~ 76 (430)
T 1ra0_A 7 NALQTIINARLPGEE------GLWQIHLQDGKISAIDAQSGV----MPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQ 76 (430)
T ss_dssp -CCCEEEEEBCTTCC------SEEEEEEETTEEEEEEEESSC----CCCCTTEEECTTCEEESCEEEEEECTTTTTCTTS
T ss_pred CCcEEEEeeEecCCC------ceeEEEEECCEEEEeecCCCC----CCCCcceEccCCCEecccccccccchhhhhhcCC
Confidence 468999999999642 456999999999999975432 1135689999999999999999999987766654
Q ss_pred cC---CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-C-----HHHHHHHHHHhCCeEEeec
Q 012333 98 AD---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-H-----VSEMAKAVELLGLRACLVQ 168 (466)
Q Consensus 98 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-~-----~~~~~~~~~~~g~~~~~~~ 168 (466)
.. +.++.+|+.. .|+....++.++.+......+..++++||||+++++.. . .....+.............
T Consensus 77 ~~~~~~~~~~~~l~~-~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (430)
T 1ra0_A 77 PNWNQSGTLFEGIER-WAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQI 155 (430)
T ss_dssp SSCCSSCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTTCHHHHHHHHHHHHHTTTCEEEE
T ss_pred CcCCCCCCHHHHHHH-hHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChHHHHHHHHHHHHHhhhhhEEEEE
Confidence 43 5677888864 35556667777777777778888999999999987532 1 2222332222122211111
Q ss_pred ccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeeccccc--CCHHHHHHHHHHHHHcCCccceeccCC
Q 012333 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMN--ATDRLLLETRDMAREFKTGIHMHVAEI 246 (466)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~l~~~~~~a~~~~~~v~~H~~~~ 246 (466)
... ...+. +.. ... .+.++++...+.+.+. ..++..+. .+++.+.++++.|++.|+++.+|+.+.
T Consensus 156 ~~~-~~~~~---~~~---~~~----~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~ 222 (430)
T 1ra0_A 156 VAF-PQEGI---LSY---PNG----EALLEEALRLGADVVG--AIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEI 222 (430)
T ss_dssp EEE-CTTCS---SSS---TTH----HHHHHHHHHTTCSEEC--CCGGGSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCS
T ss_pred Eec-CCccc---ccC---chH----HHHHHHHHHhCCCeEe--eeecccccccccHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 000 00000 000 111 1122222222322222 12333333 678889999999999999999999765
Q ss_pred cchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChh-------hHHHHHhcCCeEEECccchhhc---------
Q 012333 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT-------EIGLLSRAGVKVSHCPASAMRM--------- 310 (466)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-------~~~~~~~~g~~~~~~p~~~~~~--------- 310 (466)
......... ...+.+...+. +.+..+.|+.+++++ .++++++.|+.+++||.+++..
T Consensus 223 ~~~~~~~~~------~~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~~~p~~~~~~~~~~~~~p~ 295 (430)
T 1ra0_A 223 DDEQSRFVE------TVAALAHHEGM-GARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPK 295 (430)
T ss_dssp SCTTCCHHH------HHHHHHHHHTC-GGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEEECHHHHHHHTTTTCCSSC
T ss_pred CchhHHHHH------HHHHHHHHhCC-CCCEEEEeccccccCChHhHHHHHHHHHHcCCEEEECchhhhhhccccCCCCC
Confidence 432211111 02334445554 667889999999886 8999999999999999876543
Q ss_pred -cCCccHHHHHHcCCcEEEccCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 012333 311 -LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (466)
Q Consensus 311 -~~~~~~~~~~~~gi~~~~gsD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 385 (466)
.+..+++.++++|+++++|||+++ .....+++.+++.+....+.. .++|++++++++|.|||+++
T Consensus 296 ~~~~~~~~~~~~~Gv~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~al~~~T~~~A~~l 365 (430)
T 1ra0_A 296 RRGITRVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHMGLHVCQLM----------GYGQINDGLNLITHHSARTL 365 (430)
T ss_dssp CCCCCCHHHHHHTTCCEEECCBCSSBTTBSCCCCCHHHHHHHHHHHTTCC----------SHHHHHGGGGGGTHHHHHHT
T ss_pred cCCCCCHHHHHHCCCEEEEeCCCCcccCCCCCCCCHHHHHHHHHHHHccC----------CcccHHHHHHHHHHHHHHHh
Confidence 356789999999999999999973 223468899988776554321 12589999999999999999
Q ss_pred CCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeee
Q 012333 386 LWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 448 (466)
Q Consensus 386 gl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 448 (466)
|+++ |+|++||+|||||+|.+.+ .+.+. ...+|..||++|++||++++++
T Consensus 366 g~~~--G~i~~G~~ADlvv~d~~~~-----~~~~~------~~~~v~~v~~~G~~v~~~~~~~ 415 (430)
T 1ra0_A 366 NLQD--YGIAAGNSANLIILPAENG-----FDALR------RQVPVRYSVRGGKVIASTQPAQ 415 (430)
T ss_dssp TCSS--CSSCTTSBCCEEEESSSSH-----HHHHH------HTCCCSEEEETTEEEEECCCCC
T ss_pred CCCC--cccCCCCcCCEEEEcCCCh-----hHHHh------ccCcceEEEECCEEEecCCcce
Confidence 9964 9999999999999998721 11111 2468999999999999999875
No 18
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=100.00 E-value=4.5e-42 Score=336.11 Aligned_cols=367 Identities=18% Similarity=0.178 Sum_probs=247.7
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
|++++|+|++|+++++ ..+..+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+......
T Consensus 3 ~~~~~i~n~~v~~~~~-~~~~~~~~v~I~~g~I~~vg~~~~~-----~~~~~viD~~G~~v~PGlID~H~H~~~~~~~-- 74 (423)
T 3feq_A 3 LTITVLQGGNVLDLER-GVLLEHHHVVIDGERIVEVTDRPVD-----LPNAQAIDVRGKTVMPGFIDCHVHVLASNAN-- 74 (423)
T ss_dssp -CEEEEEEEEEEETTT-TEEEEEEEEEEETTEEEEEECSCCC-----CSSCEEEECTTCEEEECEEEEEECTTCCSSC--
T ss_pred ceEEEEEccEEEeCCC-CcccCCceEEEECCEEEEecCCCCC-----CCCCeEEeCCCCEECCCeeeeEeeecccCCC--
Confidence 5689999999998664 4566788999999999999985321 2477899999999999999999999653220
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHH---hCCeEEeecccccCC
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL---LGLRACLVQSTMDCG 174 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~ 174 (466)
. +.....++.+.+......+..++++||||+++++.... .+.++... .|++.+.........
T Consensus 75 -----~---------~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~~~~~~~~g~r~~~~g~~~~~~ 139 (423)
T 3feq_A 75 -----L---------GVNATQPNILAAIRSLPILDAMLSRGFTSVRDAGGADW-SLMQAVETGLVSGPRIFPSGKALSQT 139 (423)
T ss_dssp -----H---------HHHHHSCHHHHHHTHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCSCEEECCCSEEECT
T ss_pred -----h---------hhhhcCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCcccccC
Confidence 0 00122344555555566778899999999999986553 44444433 477777655444322
Q ss_pred CCCCcccc-------------c---CChHHHHHHHHHHHHHhccCCCCCeEEEEe--------ecccccCCHHHHHHHHH
Q 012333 175 EGLPASWA-------------V---RTTDDCIQSQKELYAKHHHAADGRIRIWFG--------IRQIMNATDRLLLETRD 230 (466)
Q Consensus 175 ~~~~~~~~-------------~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~~~l~~~~~ 230 (466)
.+...... . .......++.++.+++..+.+...++++.. ++.....+++.+.++++
T Consensus 140 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~ 219 (423)
T 3feq_A 140 GGHGDFRPRGDLLEPCSCCFRTGAIARVVDGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVD 219 (423)
T ss_dssp TSTTCCCCC---CCCCCSSCCTTCSEEECCSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHH
T ss_pred CCCccccccccccccccccccccccceecCCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHH
Confidence 11111000 0 000111233444555555555677887653 44556789999999999
Q ss_pred HHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEE--------
Q 012333 231 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH-------- 302 (466)
Q Consensus 231 ~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~-------- 302 (466)
.|+++|+++++|+.+... ....++ .+ ...+.|+..++++.++++++.|+.++.
T Consensus 220 ~A~~~g~~v~~H~~~~~~--------------i~~~l~-~g----~~~i~H~~~~~~~~~~~l~~~gv~~~pt~~~~~~~ 280 (423)
T 3feq_A 220 EAEAANTYVMAHAYTGRA--------------IARAVR-CG----VRTIEHGNLVDEAAAKLMHEHGAFVVPTLVTYDAL 280 (423)
T ss_dssp HHHHTTCCEEEEEEEHHH--------------HHHHHH-HT----CCEEEEEEECCHHHHHHHHHHTCEEECCTHHHHHH
T ss_pred HHHHCCCeEEEEeCChHH--------------HHHHHH-cC----CCEEeccCcCCHHHHHHHHHCCCccccchHHHHHH
Confidence 999999999999974221 111111 11 246899999999999999999998843
Q ss_pred ---------Cccchhhc-----cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCC
Q 012333 303 ---------CPASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAAL 368 (466)
Q Consensus 303 ---------~p~~~~~~-----~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 368 (466)
||.++.+. ....+++.+++.|+++++|||++.... ...+.+++.. . +.+
T Consensus 281 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gTD~~~~~~-~~~~~e~~~~--~--------------~~l 343 (423)
T 3feq_A 281 AKHGAEFGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGSDLLGEMH-AFQSGEFRIR--A--------------EVL 343 (423)
T ss_dssp HHHTGGGTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCCCCCGGGG-GGTTHHHHHH--H--------------TTS
T ss_pred HhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC-cchHHHHHHH--H--------------hhC
Confidence 34333222 134578899999999999999963211 1233343321 1 129
Q ss_pred CHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeee
Q 012333 369 PAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 448 (466)
Q Consensus 369 s~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 448 (466)
|++++|+++|.|||+++|+++++|+|++||.|||||+|.| |+++... +.....+|..||++|++|+++++..
T Consensus 344 s~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~-----p~~~~~~---~~~~~~~v~~v~~~G~~v~~~~~~~ 415 (423)
T 3feq_A 344 GNLEALRSATTVAAEIVNMQGQLGVIAVGAIADLVVLDGN-----PLEDIGV---VADEGARVEYVLQRGTLVKRQAAGR 415 (423)
T ss_dssp CHHHHHHTTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSC-----TTTCGGG---TSSSTTSEEEEEETTEEEEEC----
T ss_pred CHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCC-----hhhCHHH---HhccCCCceEEEECCEEEeCCcccc
Confidence 9999999999999999999888999999999999999999 4444211 1111258999999999999998876
Q ss_pred ecc
Q 012333 449 LLM 451 (466)
Q Consensus 449 ~~~ 451 (466)
+..
T Consensus 416 ~~~ 418 (423)
T 3feq_A 416 EGH 418 (423)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 19
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=100.00 E-value=1.9e-41 Score=331.63 Aligned_cols=360 Identities=18% Similarity=0.231 Sum_probs=246.3
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
|.+++|+|++|+++++ ..+..+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+......
T Consensus 3 m~~~~i~n~~i~~~~~-~~~~~~~~i~i~~g~I~~i~~~~~~-----~~~~~~iD~~g~~v~PGliD~H~H~~~~~~~-- 74 (426)
T 2r8c_A 3 LTTFLFRNGALLDPDH-PDLLQGFEILIEDGFIREVSDKPIK-----SSNAHVIDVKGKTIMPGLIDLHVHVVAIEFN-- 74 (426)
T ss_dssp -CEEEEEEEEECCTTS-SSCEEEEEEEEESSBEEEEESSCCC-----CSSCEEEECTTCEEEECEEEEEECTTCCSSC--
T ss_pred cccEEEEeeEEEeCCC-CcccCCceEEEECCEEEEEcCCCCC-----CCCCeEEECCCCEEcCCeEeeeeccccccCC--
Confidence 4689999999997643 4456778999999999999985321 2467899999999999999999999653221
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHH---hCCeEEeecccccCC
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL---LGLRACLVQSTMDCG 174 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~ 174 (466)
. +.....++.+.+......+..++++||||+++++.... .+.++... .|++.+.....+...
T Consensus 75 -----~---------~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~i~~~~~~gpri~~~g~~i~~~ 139 (426)
T 2r8c_A 75 -----L---------PRVATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAGY-PFKQAVESGLVEGPRLFVSGRALSQT 139 (426)
T ss_dssp -----H---------HHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCCCEEEECCSEEECT
T ss_pred -----c---------hhhccCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCCcccCC
Confidence 0 00122445555666667788899999999999986653 44444443 567776655443321
Q ss_pred CCCCc-----------------------ccccCChHHHHHHHHHHHHHhccCCCCCeEEEEe--------ecccccCCHH
Q 012333 175 EGLPA-----------------------SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFG--------IRQIMNATDR 223 (466)
Q Consensus 175 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~~ 223 (466)
.+... .......++. .+.+++....+...++++.. ++.....+++
T Consensus 140 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e 215 (426)
T 2r8c_A 140 GGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEV----RRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSED 215 (426)
T ss_dssp TSTTCCCCCSSBCCCSCSSSSBCCTTCCEEECCSHHHH----HHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHH
T ss_pred CCCcccccccccccccccccccccccccccccCCHHHH----HHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHH
Confidence 11110 0001122333 33333333344566777653 3445578999
Q ss_pred HHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEE-
Q 012333 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH- 302 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~- 302 (466)
++.++++.|+++|+++++|+.+.... ...++ . ....+.|+..++++.++++++.|+.++.
T Consensus 216 ~l~~~~~~A~~~g~~v~~H~~~~~~i--------------~~al~-~----G~~~i~H~~~~~~~~~~~~~~~gv~~~pt 276 (426)
T 2r8c_A 216 EIRAIVAEAQGRGTYVLAHAYTPAAI--------------ARAVR-C----GVRTIEHGNLIDDETARLVAEHGAYVVPT 276 (426)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSHHHH--------------HHHHH-T----TCSEEEECTTCCHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHHHHcCCEEEEEeCChHHH--------------HHHHH-c----CCCEEecCCcCCHHHHHHHHHcCCeEeec
Confidence 99999999999999999999753211 11111 1 1245899999999999999999998843
Q ss_pred ----------------Cccchhhc-----cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCC
Q 012333 303 ----------------CPASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANG 361 (466)
Q Consensus 303 ----------------~p~~~~~~-----~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (466)
+|.++.+. ....+++.+++.|+++++|||+++... .....+++..
T Consensus 277 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~~~~-~~~~~e~~~~------------- 342 (426)
T 2r8c_A 277 LVTYDALASEGEKYGLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQ-RLQSDEFRIL------------- 342 (426)
T ss_dssp THHHHHHHHHTTTTTCCHHHHTTSTTTGGGHHHHHHHHHHTTCEECCCCCCCGGGG-GGTTHHHHHH-------------
T ss_pred hHHHHHHhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCC-cchHHHHHHH-------------
Confidence 23333222 234578899999999999999974321 1223333221
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEE
Q 012333 362 TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWV 441 (466)
Q Consensus 362 ~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v 441 (466)
.+.+|+.++|+++|.|||+++|+++++|+|++||.|||||+|.| |+++... +.....+|..||++|++|
T Consensus 343 ---~~~l~~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~-----p~~~~~~---~~~~~~~v~~v~~~G~~v 411 (426)
T 2r8c_A 343 ---AEVLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGN-----PLKSVDC---LLGQGEHIPLVMKDGRLF 411 (426)
T ss_dssp ---TTTSCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSC-----TTTCGGG---TCSSSTTCCEEEETTEEE
T ss_pred ---HhcCCHHHHHHHHHHHHHHHhCCCCCCccCCCCCcCCEEEECCC-----hHhCHHH---HhCcCCcceEEEECCEEE
Confidence 11399999999999999999999888999999999999999999 4444211 111126899999999999
Q ss_pred EECCeee
Q 012333 442 MKNKKIL 448 (466)
Q Consensus 442 ~~~g~~~ 448 (466)
++.++..
T Consensus 412 ~~~~~~~ 418 (426)
T 2r8c_A 412 VNELEGH 418 (426)
T ss_dssp EETTC--
T ss_pred ecccccc
Confidence 9988754
No 20
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=100.00 E-value=8.9e-41 Score=324.76 Aligned_cols=358 Identities=18% Similarity=0.173 Sum_probs=247.4
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
.+++|+|++|+++++ ..++.+++|+|++|||++|++..+. ...+.++||++|++|+|||||+|+|+......
T Consensus 2 ~~~~i~~~~i~~~~~-~~~~~~~~v~I~~g~I~~vg~~~~~----~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~--- 73 (403)
T 3gnh_A 2 EIKAVSAARLLDVAS-GKYVDNPLVIVTDGRITSIGKKGDA----VPAGATAVDLPGVTLLPGLIDMHVHLDSLAEV--- 73 (403)
T ss_dssp CEEEEEEEEEEETTT-TEEEESEEEEEETTEEEEEEETTSC----CCTTCEEEEEEEEEEEECEEEEEECTTCCTTC---
T ss_pred ccEEEEccEEEECCC-CcccCCCEEEEECCEEEEEeCCCCC----CCCCCeEEECCCCEEcCCeEeeeEccccCccc---
Confidence 478999999998664 4566889999999999999986531 12477999999999999999999999643211
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-HHHHHHHHHHh----CCeEEeecccccC
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAKAVELL----GLRACLVQSTMDC 173 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-~~~~~~~~~~~----g~~~~~~~~~~~~ 173 (466)
.|.. ....++.+........+..++++||||++++++.. .....+...+. |++.+.....+..
T Consensus 74 ------~~~~------~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~gpr~~~~~~~~~~ 141 (403)
T 3gnh_A 74 ------GGYN------SLEYSDRFWSVVQTANAKKTLEAGFTTVRNVGAADYDDVGLREAIDAGYVPGPRIVTAAISFGA 141 (403)
T ss_dssp ------CSGG------GGGSCHHHHHHHHHHHHHHHHHTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEECCSCEES
T ss_pred ------chhh------hhcCCHHHHHHHHHHHHHHHHhCCeeEEEeCCCCccccHHHHHHHHCCCCCCCeEEecCccccc
Confidence 1110 11234455555666677889999999999997643 22233333343 4477665544331
Q ss_pred CCCC------Cccccc--CChHHHHHHHHHHHHHhccCCCCCeEEEEe--------ecccccCCHHHHHHHHHHHHHcCC
Q 012333 174 GEGL------PASWAV--RTTDDCIQSQKELYAKHHHAADGRIRIWFG--------IRQIMNATDRLLLETRDMAREFKT 237 (466)
Q Consensus 174 ~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~~~l~~~~~~a~~~~~ 237 (466)
..+. ++.+.. .......++..+.++++.+.+...++++.. .+.....+++++.++++.|+++|+
T Consensus 142 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~ 221 (403)
T 3gnh_A 142 TGGHCDSTFFPPSMDQKNPFNSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGI 221 (403)
T ss_dssp TTSTTSCCSSCGGGCCCCTTCCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCcccccCchhhcccCCcccCCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCC
Confidence 1111 111100 001112334445555555556677777652 345567899999999999999999
Q ss_pred ccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-------
Q 012333 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM------- 310 (466)
Q Consensus 238 ~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~------- 310 (466)
++++|+.+..... ..++ .+ ...+.|+.++++++++++++.|+.++.+|......
T Consensus 222 ~v~~H~~~~~~i~--------------~~~~-~g----~~~i~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 282 (403)
T 3gnh_A 222 KVAAHAHGASGIR--------------EAVR-AG----VDTIEHASLVDDEGIKLAVQKGAYFSMDIYNTDYTQAEGKKN 282 (403)
T ss_dssp EEEEEECSHHHHH--------------HHHH-TT----CSEEEECTTCCHHHHHHHHHHTCEEECCCSTHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHH--------------HHHH-hC----CCEEecCCcCCHHHHHHHHHCCCEEEeeechhhhhhhhcccc
Confidence 9999996533211 1111 11 24689999999999999999999999877543110
Q ss_pred ---------------cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 012333 311 ---------------LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 375 (466)
Q Consensus 311 ---------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~ 375 (466)
....+++.+++.|+++++|||++..... ..+.++... .. .++|+.++|+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~~~~~-~~~~e~~~~--~~-------------~gl~~~~al~ 346 (403)
T 3gnh_A 283 GVLEDNLRKDRDIGELQRENFRKALKAGVKMVYGTDAGIYPHG-DNAKQFAVM--VR-------------YGATPLQAIQ 346 (403)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCBTTBCTT-CGGGHHHHH--HH-------------TTCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCCC-chHHHHHHH--HH-------------cCCCHHHHHH
Confidence 1124688999999999999999643222 234444432 11 1599999999
Q ss_pred HHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEE
Q 012333 376 MATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 443 (466)
Q Consensus 376 ~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 443 (466)
++|.|||+++|+++++|+|++||.|||||+|.| |++++ ..+ .+|..||++|++|+.
T Consensus 347 ~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~-----p~~~~-~~~------~~v~~v~~~G~~v~~ 402 (403)
T 3gnh_A 347 SATLTAAEALGRSKDVGQVAVGRYGDMIAVAGD-----PLADV-TTL------EKPVFVMKGGAVVKA 402 (403)
T ss_dssp HTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSC-----TTTCG-GGG------GSCSEEEETTEEEEC
T ss_pred HHHHHHHHHhCCCCCceeECCCCcCCEEEECCC-----hhhCH-HHh------cCcCEEEECCEEEeC
Confidence 999999999999988999999999999999999 55542 222 589999999999874
No 21
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=100.00 E-value=6e-41 Score=327.11 Aligned_cols=359 Identities=18% Similarity=0.202 Sum_probs=255.0
Q ss_pred cccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccc
Q 012333 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~ 95 (466)
..|++++|+|++|+++++ ..+.+++|+|+||||++|++..+.+..+ ++.++||++ ++|+|||||+|+|+.....+
T Consensus 34 ~~~~~~li~n~~v~~~~~--~~~~~~~V~I~~g~I~~vg~~~~~~~~~--~~~~viD~~-~~v~PGlID~H~H~~~~~~~ 108 (420)
T 2imr_A 34 DAHTPRLLTCDVLYTGMG--GAQSPGGVVVVGETVAAAGHPDELRRQY--PHAAEERAG-AVIAPPPVNAHTHLDMSAYE 108 (420)
T ss_dssp --CCEEEEEESEEECC-----EESSEEEEEETTEEEEEECHHHHHHHC--TTCEEEECC-SEESSCCCEEEEESSCCHHH
T ss_pred cccccEEEECCEEEeCCC--CeeeccEEEEECCEEEEecCcccccccC--CCCeeecCC-eEECCCCEecCcCcchhhhh
Confidence 346789999999997653 3567889999999999999754321111 256899999 99999999999999765544
Q ss_pred cccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHHhCCeEEeecccccCCC
Q 012333 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (466)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (466)
+.. .++.+|+....++.+..+.+ ......+..++++||||+++++.. ...+..+....|++.........
T Consensus 109 g~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~g~r~~~~~~~~~--- 178 (420)
T 2imr_A 109 FQA--LPYFQWIPEVVIRGRHLRGV----AAAQAGADTLTRLGAGGVGDIVWA-PEVMDALLAREDLSGTLYFEVLN--- 178 (420)
T ss_dssp HHH--CHHHHTSHHHHHHHTTCCHH----HHHHHHHHHHHHTTCCCEEEEECS-HHHHHHHHTCTTCCEEEEEEECB---
T ss_pred hcc--CCHHHHHHHhhhhhhhccCH----HHHHHHHHHHHhcCcEEEEEccCC-HHHHHHHHHhcCcEEEEEeeecC---
Confidence 432 34556655443332212211 233445677999999999998643 22222234456777655443332
Q ss_pred CCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh
Q 012333 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (466)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 255 (466)
.++. .....+.+..+.++.+...+.+.+++.+.++.....+++.+.++++.+++.|+++++|+.+...+......
T Consensus 179 -~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~ 253 (420)
T 2imr_A 179 -PFPD----KADEVFAAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRT 253 (420)
T ss_dssp -CCGG----GHHHHHHHHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCBEEEESCSHHHHHHHHH
T ss_pred -CCch----hhHHHHHHHHHHHHHHhcccCCceEEEecCCcCCCcCHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHH
Confidence 1111 11233445555666665544466777788877778899999999999999999999999876654444433
Q ss_pred hcCC------------------------CCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-
Q 012333 256 TRKV------------------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM- 310 (466)
Q Consensus 256 ~~~~------------------------~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~- 310 (466)
..+. +....+.+...+.+..+.++.|+.++++++++++++.|+.+.+||.++...
T Consensus 254 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~H~~~l~~~~i~~l~~~g~~~~~~p~~~~~~~ 333 (420)
T 2imr_A 254 GGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVTPDDIARVARAGCAVVTCPRSNHHLE 333 (420)
T ss_dssp SCSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHHHHHHTCGGGCCEEEECCSCCHHHHHHHHHHTCCEEECHHHHHHTT
T ss_pred hhccccccccccchhhhhhhhccccccCCCCHHHHHHHcCCCCCCeEEEecCcCCHHHHHHHHHcCCeEEECHHHHHHhc
Confidence 2210 122455666677777778999999999999999999999999999987665
Q ss_pred cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCc
Q 012333 311 LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDND 390 (466)
Q Consensus 311 ~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~ 390 (466)
.+.++++.++++|+++++|||+++.+...+++.+++.+... ..++|++++++++|.|||+++|++++
T Consensus 334 ~~~~~l~~~~~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~-------------~~~ls~~~al~~aT~n~A~~lgl~~~ 400 (420)
T 2imr_A 334 CGTFDWPAFAAAGVEVALGTDSVASGETLNVREEVTFARQL-------------YPGLDPRVLVRAAVKGGQRVVGGRTP 400 (420)
T ss_dssp CCCCCHHHHHHTTCCEEECCCCHHHHSCSCTHHHHHHHHHH-------------CTTSCHHHHHHHHHHHHHHHHC--CC
T ss_pred cCCCCHHHHHHCCCeEEEECCCCccCCCCCHHHHHHHHHhc-------------CCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 56789999999999999999996543446788888766321 01499999999999999999999888
Q ss_pred ccccccCCccCEEEEcCC
Q 012333 391 IGSLEAGKKADMVVVDPF 408 (466)
Q Consensus 391 ~G~i~~G~~ADlvv~d~~ 408 (466)
+|+|++||+||| |+|.+
T Consensus 401 ~GsL~~Gk~ADl-vvd~~ 417 (420)
T 2imr_A 401 FLRRGETWQEGF-RWELS 417 (420)
T ss_dssp CCSTTSBCCGGG-BGGGC
T ss_pred ceeeCCCCccCE-EEECC
Confidence 999999999999 78876
No 22
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=100.00 E-value=4.1e-40 Score=321.17 Aligned_cols=376 Identities=16% Similarity=0.194 Sum_probs=245.3
Q ss_pred ceEEEEccEEEeecCC---cceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccc
Q 012333 19 STMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~---~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~ 95 (466)
+|++|+|++|+|+++. ...+.+++|+|+||||++|++..+.+. . .++++||++|++|+|||||+|+|+.....+
T Consensus 5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~-~--~~~~viD~~G~~v~PG~ID~H~H~~~~~~~ 81 (416)
T 2q09_A 5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKG-P--YPAHWQDMKGKLVTPGLIDCHTHLIFAGSR 81 (416)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC-----CCTTSEECTTCEEEECEEEEEECCCCCSCC
T ss_pred ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhccc-c--CCCeEEeCCCCEECCcccccccCcchhhhh
Confidence 5899999999987653 245567899999999999997543211 0 145799999999999999999998654322
Q ss_pred cccCCCCchHhhhhcccc--------------ccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc--cCHH---HHHH-
Q 012333 96 GIADDVDLMTWLHDRIWP--------------YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHVS---EMAK- 155 (466)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~--~~~~---~~~~- 155 (466)
. ..+..|+.+..|. .....++++.+.........++++|||++.+++. .... ...+
T Consensus 82 ~----~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~ 157 (416)
T 2q09_A 82 A----EEFELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRV 157 (416)
T ss_dssp H----HHHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHH
T ss_pred H----HHHHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCcccChHhHHHHHHH
Confidence 1 0122233221111 0011234444444555678899999999999642 1211 1122
Q ss_pred ---HHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHH-HHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHH
Q 012333 156 ---AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK-ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDM 231 (466)
Q Consensus 156 ---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~ 231 (466)
.....+++....... ...++..+.. .....+.... +.++.+...+ ..............+++.+.++++.
T Consensus 158 ~~~~~~~~~~r~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (416)
T 2q09_A 158 ARRLGEALPIRVKTTLLA---AHAVPPEYRD-DPDSWVETICQEIIPAAAEAG--LADAVDVFCEHIGFSLAQTEQVYLA 231 (416)
T ss_dssp HHHHHHHSSSEEEEEEEE---ETSCCGGGTT-CHHHHHHHHHHTHHHHHHHTT--CCSEEEEBBSTTSBCHHHHHHHHHH
T ss_pred HHHHHhhCCceEEEeeec---cccCCccccC-CHHHHHHHHHhhhhHHHHhcc--cccccccccCCCcCCHHHHHHHHHH
Confidence 223456665432110 0112222111 1122222211 2223332221 1111112233345688999999999
Q ss_pred HHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-
Q 012333 232 AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM- 310 (466)
Q Consensus 232 a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~- 310 (466)
+++.|+++.+|+.+..... ..+.....+ ...+.|+.++++++++++++.|+.+++||.+++..
T Consensus 232 a~~~g~~v~~H~~~~~~~~------------~~~~~~~~g----~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~ 295 (416)
T 2q09_A 232 ADQYGLAVKGHMDQLSNLG------------GSTLAANFG----ALSVDHLEYLDPEGIQALAHRGVVATLLPTAFYFLK 295 (416)
T ss_dssp HHHTTCEEEEEESSSCCCS------------HHHHHHHTT----CSEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTT
T ss_pred HHHCCCcEEEEECCCCchH------------HHHHHHHcC----CCEEeecccCCHHHHHHHHHcCCeEEEcCccHHhhc
Confidence 9999999999987643110 112112222 23589999999999999999999999999987654
Q ss_pred -cCCccHHHHHHcCCcEEEccCCCCC-CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 311 -LGFAPIKEMLHADICVSLGTDGAPS-NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 311 -~~~~~~~~~~~~gi~~~~gsD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
...++++.+++.|+++++|||+++. .+..+++..++.+.... ++|++++++++|.|||+++|++
T Consensus 296 ~~~~~~~~~~~~~Gv~~~~gtD~~~~~~~~~~~~~~~~~~~~~~--------------~l~~~~al~~~T~~~A~~lg~~ 361 (416)
T 2q09_A 296 ETKLPPVVALRKAGVPMAVSSDINPGTAPIVSLRMAMNMACTLF--------------GLTPVEAMAGVTRHAARALGEQ 361 (416)
T ss_dssp CCCCCCHHHHHHTTCCEEECCCCBTTTBCCCCHHHHHHHHHHHH--------------CCCHHHHHHHTTHHHHHHTTCT
T ss_pred cccccCHHHHHHCCCeEEEecCCCCccCCCCCHHHHHHHHHHHc--------------CCCHHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999998753 23467888887654322 4999999999999999999998
Q ss_pred CcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCe
Q 012333 389 NDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 446 (466)
Q Consensus 389 ~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 446 (466)
+++|+|++||.|||||+|.+++. + +.+.....+|..||++|++||+++-
T Consensus 362 ~~~G~l~~G~~ADlvvld~~~~~-----~----~~~~~~~~~v~~v~v~G~~v~~~~~ 410 (416)
T 2q09_A 362 EQLGQLRVGMLADFLVWNCGHPA-----E----LSYLIGVDQLVSRVVNGEETLHGEG 410 (416)
T ss_dssp TTSSSCCTTSBCCEEEESSSCTT-----H----HHHSCSCCCEEEEEETTEECCC---
T ss_pred ccceecCCCCCccEEEECCCchh-----h----hhhhhccCcceEEEECCEEEEeCCC
Confidence 88999999999999999998432 2 1222234689999999999998653
No 23
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=100.00 E-value=8.4e-40 Score=319.43 Aligned_cols=376 Identities=19% Similarity=0.241 Sum_probs=240.5
Q ss_pred ccceEEEEccEEEeecCC---cceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccc
Q 012333 17 SSSTMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~---~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~ 93 (466)
+++|++|+|+.|+|+++. ...+.+++|+|+||||++|++..+.+...+ +.+++||++|++|+|||||+|+|+....
T Consensus 13 ~~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~-~~~~viD~~G~~v~PG~ID~H~H~~~~~ 91 (419)
T 2puz_A 13 GNATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLS-TADETTDCGGRWITPALIDCHTHLVFGG 91 (419)
T ss_dssp --CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGS-CCSEEEECTTCEEEECEEECCCCCCCSS
T ss_pred CCCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhcc-CCCeEEeCCCCEeCcCceecccCccchh
Confidence 457899999999987653 355678899999999999997543221111 1358999999999999999999986432
Q ss_pred cccccCCCCchHhhhhcccc--------------ccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc--CH---HHHH
Q 012333 94 AKGIADDVDLMTWLHDRIWP--------------YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HV---SEMA 154 (466)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~--~~---~~~~ 154 (466)
.+. ..+..|+.+..|. .....+.++.+......+..++++|||++.+++.. .. ....
T Consensus 92 ~~~----~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~ 167 (419)
T 2puz_A 92 NRA----MEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKML 167 (419)
T ss_dssp CCH----HHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSCCSHHHHHHHH
T ss_pred hhH----HHHHHHhcCCCHHHHHhcCCCeecchhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCCCCCchhHHHHH
Confidence 211 0011121111000 00112334444444556788999999999885321 11 1223
Q ss_pred HHHHHh----CCeEEeecccccCCCCCCcccccCChHHHHHHH-HHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHH
Q 012333 155 KAVELL----GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETR 229 (466)
Q Consensus 155 ~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ 229 (466)
++.... +++..... ...+..+..+.. .....+... .+.++.+...+ ..............+++.+.+++
T Consensus 168 ~~~~~~~~~~~~r~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 241 (419)
T 2puz_A 168 RVARRLETLRPVRIVTSY---LAAHATPADYKG-RNADYITDVVLPGLEKAHAEG--LADAVDGFCEGIAFSVKEIDRVF 241 (419)
T ss_dssp HHHHHHTTTSSCEEEEEE---CCTTCCCGGGTT-CHHHHHHHTHHHHHHHHHHTT--CCSEECCEESTTSBCHHHHHHHH
T ss_pred HHHHHHhhhcCceEEEEe---cccccCchhhcc-cHHHHHHHHHhhhhhhhhhcc--cccccccccCCCCcCHHHHHHHH
Confidence 333332 33332211 011112222111 112222211 12222322211 11111111222345788999999
Q ss_pred HHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhh
Q 012333 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR 309 (466)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~ 309 (466)
+.+++.|+++.+|+.+.... ...+.....+ ...+.|+.++++++++++++.|+.++++|.+++.
T Consensus 242 ~~a~~~g~~v~~H~~~~~~~------------~~~~~~~~~g----~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~ 305 (419)
T 2puz_A 242 AAAQQRGLPVKLHAEQLSNL------------GGAELAASYN----ALSADHLEYLDETGAKALAKAGTVAVLLPGAFYA 305 (419)
T ss_dssp HHHHHTTCCBEEEESSSSCC------------SHHHHHHHTT----CSEEEECTTCCHHHHHHHHHHTCEEEECHHHHHH
T ss_pred HHHHHCCCcEEEEecccccC------------CHHHHHHhcC----CceehHhccCCHHHHHHHHHcCCcEEECCchhhh
Confidence 99999999999998753211 1222222222 2357899999999999999999999999987765
Q ss_pred c--cCCccHHHHHHcCCcEEEccCCCCC-CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 310 M--LGFAPIKEMLHADICVSLGTDGAPS-NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 310 ~--~~~~~~~~~~~~gi~~~~gsD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
. .+.++++.+++.|+++++|||+++. .+..+++..++.+.... ++|++++++++|.|||+++|
T Consensus 306 l~~~~~~~~~~~~~~Gv~~~lgsD~~~~~~~~~~l~~~~~~~~~~~--------------~ls~~~al~~~T~~~A~~lg 371 (419)
T 2puz_A 306 LREKQLPPVQALRDAGAEIALATDCNPGTSPLTSLLLTMNMGATLF--------------RMTVEECLTATTRNAAKALG 371 (419)
T ss_dssp HTCCCCCCHHHHHHHTCCEEECCCCCSSSCCBCCHHHHHHHHHHHH--------------CCCHHHHHHHTTHHHHHHTT
T ss_pred hcccccccHHHHHHCCCeEEEECCCCCCCCccccHHHHHHHhcccc--------------CCCHHHHHHHHHHHHHHHcC
Confidence 4 3568999999999999999999763 33458888887654322 39999999999999999999
Q ss_pred CCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEE
Q 012333 387 WDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 442 (466)
Q Consensus 387 l~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 442 (466)
+++++|+|++||+|||||+|.+++ .+ +.+.....+|..||++|++|.
T Consensus 372 ~~~~~Gsi~~Gk~ADlvvld~~~~-----~~----~~~~~~~~~v~~v~v~G~~v~ 418 (419)
T 2puz_A 372 LLAETGTLEAGKSADFAIWDIERP-----AE----LVYRIGFNPLHARIFKGQKVS 418 (419)
T ss_dssp CTTTSSSCCTTSBCCEEEECCSST-----TH----HHHCBSCCCEEEEEETTEECC
T ss_pred CCCCccccCCCCcCCEEEECCCch-----hc----chhhhcCCceEEEEECCEEcC
Confidence 988899999999999999999833 22 222234468999999999875
No 24
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=100.00 E-value=1.4e-40 Score=323.28 Aligned_cols=371 Identities=19% Similarity=0.215 Sum_probs=246.5
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccc--
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA-- 94 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~-- 94 (466)
.++|++|+|++|++++ .. ++|+|+||+|++|++..+. ++.++||++|++|+|||||+|+|+.....
T Consensus 3 ~~~~~li~n~~v~~~~--~~----~~v~I~~g~I~~vg~~~~~------~~~~viD~~G~~v~PGlID~H~H~~~~~~~~ 70 (403)
T 2qt3_A 3 KDFDLIIRNAYLSEKD--SV----YDIGIVGDRIIKIEAKIEG------TVKDEIDAKGNLVSPGFVDAHTHMDKSFTST 70 (403)
T ss_dssp CCEEEEEEEEEETTTT--EE----EEEEEETTEEEEEESSCCS------CEEEEEECTTCBEEECEEEEEECGGGTTTTC
T ss_pred cccceEEEeeEecCCC--ee----EEEEEECCEEEEeecCCCC------CccceEcCCCCEecccceeeeeccchhhccc
Confidence 4678999999999532 22 6999999999999975431 23579999999999999999999987654
Q ss_pred -------cccc--CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-------CHHHHHHHHH
Q 012333 95 -------KGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVE 158 (466)
Q Consensus 95 -------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-------~~~~~~~~~~ 158 (466)
.+.. ...++.+|+.. |. .. +.++.+........+++++||||++++... ....+.++..
T Consensus 71 ~~~~~~~~g~~~~~~~~l~~~~~~--~~--~~-~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~ 145 (403)
T 2qt3_A 71 GERLPKFWSRPYTRDAAIEDGLKY--YK--NA-THEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVAKTKAVEAVLEAKE 145 (403)
T ss_dssp SSSSCTTCSSCCCHHHHHHHHHHH--HH--HC-CHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTTTTHHHHHHHHHHH
T ss_pred ccccccccCCCcccCcCHHHHHHH--hh--hc-CHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCccccchHHHHHHHHH
Confidence 1110 01125566653 22 22 556666666667888999999999654321 1223334443
Q ss_pred HhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCc
Q 012333 159 LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG 238 (466)
Q Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 238 (466)
+.+.......... ...+.. ...+ ..+.++++.+.+...+. .+.++..+..+++.+.++++.|+++|++
T Consensus 146 ~~~~~~~~~~~~~-~~~~~~------~~~~----~~~~~~~~~~~g~~~~~-~~~p~~~~~~~~~~l~~~~~~A~~~g~~ 213 (403)
T 2qt3_A 146 ELKDLIDIQVVAF-AQSGFF------VDLE----SESLIRKSLDMGCDLVG-GVDPATRENNVEGSLDLCFKLAKEYDVD 213 (403)
T ss_dssp HHTTTCEEEEEEE-CTTCTT------TSTT----HHHHHHHHHHTTCSEEE-CBCTTTTTSCHHHHHHHHHHHHHHTTCE
T ss_pred HhhcceeEEEEEc-CCcccc------cCcc----hHHHHHHHHhcCCCeEE-EecCCCCCCChHHHHHHHHHHHHHcCCC
Confidence 3221111100000 000100 0111 12333333333322222 1334444455668899999999999999
Q ss_pred cceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh-------hhHHHHHhcCCeEEECccchhhcc
Q 012333 239 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRML 311 (466)
Q Consensus 239 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-------~~~~~~~~~g~~~~~~p~~~~~~~ 311 (466)
+++|+.+........... ..+.....+. ..+..+.|+.++++ ++++++++.|+.+++||... .
T Consensus 214 v~~H~~~~~~~~~~~~~~------~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~~~---~ 283 (403)
T 2qt3_A 214 IDYHIHDIGTVGVYSINR------LAQKTIENGY-KGRVTTSHAWCFADAPSEWLDEAIPLYKDSGMKFVTCFSST---P 283 (403)
T ss_dssp EEEEECCCHHHHHHHHHH------HHHHHHHTTC-TTSEEEEECTHHHHSCHHHHHHHHHHHHHHTCEEEEETTTC---C
T ss_pred eEEEeCCcccchhHHHHH------HHHHHHHcCC-CCCeEEEehhhhccCChhhHHHHHHHHHHcCCEEEECCCCC---C
Confidence 999998765432221110 1233334443 45788999999875 78999999999999999743 4
Q ss_pred CCccHHHHHHcCCcEEEccCCCC--C--CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 012333 312 GFAPIKEMLHADICVSLGTDGAP--S--NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (466)
Q Consensus 312 ~~~~~~~~~~~gi~~~~gsD~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (466)
+..+++.+++.|+++++|||++. . ....+++..++.+....+.. ..++++++++++|.|||+++|+
T Consensus 284 ~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~~~al~~~T~~~A~~lg~ 353 (403)
T 2qt3_A 284 PTMPVIKLLEAGINLGCASDNIRDFWVPFGNGDMVQGALIETQRLELK----------TNRDLGLIWKMITSEGARVLGI 353 (403)
T ss_dssp TTCCHHHHHHTTCEEEEECCSCSSSSCSCCCCCHHHHHHHHHHHTTCC----------SHHHHHHHHHHTTHHHHHHHTC
T ss_pred CCCCHHHHHHcCCcEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcC----------CccCHHHHHHHHHHHHHHhcCC
Confidence 56889999999999999999862 1 12346788777665443210 1278999999999999999999
Q ss_pred CCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeee
Q 012333 388 DNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 448 (466)
Q Consensus 388 ~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 448 (466)
++ +|+|++||.|||||+|.++ |+++ +.+ ..+|..||++|++||++|+++
T Consensus 354 ~~-~g~i~~G~~ADlvv~d~~~----~~~~----~~~---~~~v~~v~v~G~~v~~~g~~~ 402 (403)
T 2qt3_A 354 EK-NYGIEVGKKADLVVLNSLS----PQWA----IID---QAKRLCVIKNGRIIVKDEVIV 402 (403)
T ss_dssp GG-GCSSSTTSBCCEEEESSSS----HHHH----HHH---CCCEEEEEETTEEEEESSSBC
T ss_pred Cc-ccCCCCCCcCCEEEEcCCC----hHHH----hhc---CCCccEEEECCEEEecCCccc
Confidence 76 5999999999999999982 1221 111 358999999999999999875
No 25
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=100.00 E-value=4.1e-38 Score=306.40 Aligned_cols=357 Identities=14% Similarity=0.181 Sum_probs=236.8
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
++.|++|+|++|+++++ ..+.. ++|+|+||+|++|++. . + .+.++||++|++|+|||||+|+|+. ..
T Consensus 4 ~~~~~~i~n~~v~~~~~-~~~~~-~~v~I~~g~I~~ig~~-~-----~-~~~~viD~~g~~v~PGlID~H~H~~-~~--- 70 (408)
T 3be7_A 4 TSEDFLIKSKGYLDIQT-GEIIK-ADLLIRNGKIAEIGKI-N-----T-KDATVISIPDLILIPGLMDSHVHIV-GN--- 70 (408)
T ss_dssp -CCCEEEEEEEEECTTT-CCEEC-CEEEEETTEEEEEECC-C-----C-SSSEEEEEEEEEEEECEEEEEECCS-SC---
T ss_pred ccceEEEEeeEEEeCCC-Cceee-eEEEEECCEEEEEeCC-C-----C-CCCeEEECCCCEECcCceeeeEccc-CC---
Confidence 45689999999997653 23445 8999999999999975 2 1 3568999999999999999999985 21
Q ss_pred ccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-HHHHHHHHHHhCC----eEEeecccc
Q 012333 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAKAVELLGL----RACLVQSTM 171 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-~~~~~~~~~~~g~----~~~~~~~~~ 171 (466)
....| .. -..++.+.+.........++++||||+++++... .....+...+.+. +........
T Consensus 71 -----~~~~~-~~------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 138 (408)
T 3be7_A 71 -----DSKGE-ES------IADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIERGVINGPTMLVSGPAL 138 (408)
T ss_dssp -----CCCSG-GG------TTCCTHHHHHHHHHHHHHHHTTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEECCSCB
T ss_pred -----CCcch-hh------hcCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCccccCHHHHHHHHCCCCCCCEEEEcccee
Confidence 11122 11 0134455555666678889999999999987532 2223333444443 444322111
Q ss_pred --cCCCC----CCcccccC--ChHHHHHHHHHHHHHhccCCCCCeEEEEee--------cccccCCHHHHHHHHHHHHHc
Q 012333 172 --DCGEG----LPASWAVR--TTDDCIQSQKELYAKHHHAADGRIRIWFGI--------RQIMNATDRLLLETRDMAREF 235 (466)
Q Consensus 172 --~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~l~~~~~~a~~~ 235 (466)
..+.. +.+..... .......+..+.+++....+...++.+... .+....+++.+.++++.|+++
T Consensus 139 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~ 218 (408)
T 3be7_A 139 GITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNH 218 (408)
T ss_dssp BCTTSTTSCCCSCTTTCCCCTTBCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHT
T ss_pred eccCCCCccccccccccccCCcccCCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHC
Confidence 11111 11000000 001122334444544444444556654311 123567889999999999999
Q ss_pred CCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhc-----
Q 012333 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM----- 310 (466)
Q Consensus 236 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~----- 310 (466)
|+++.+|+.+... ....+ ..+ ...+.|+.+++++.++++++.|+.+..++......
T Consensus 219 g~~v~~H~~~~~~--------------i~~~~-~~g----~~~i~H~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~ 279 (408)
T 3be7_A 219 GMKVAAHAHGLIG--------------IKAAI-KAG----VDSVEHASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGA 279 (408)
T ss_dssp TCEEEEEECSHHH--------------HHHHH-HHT----CSEEEECTTCCHHHHHHHHHTTCEEECCCSTHHHHHTTTT
T ss_pred CCEEEEEeCCHHH--------------HHHHH-HcC----CCEEEECCCCCHHHHHHHHHCCCEEeeeecHHHHhhhhcc
Confidence 9999999976321 11111 122 24689999999999999999999887665332100
Q ss_pred -----------------cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 012333 311 -----------------LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373 (466)
Q Consensus 311 -----------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~a 373 (466)
....+++.+++.|+++++|||+++. +...++.+++.. .. .++|++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~~-p~~~~~~~~~~~--~~-------------~gls~~~a 343 (408)
T 3be7_A 280 KAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIF-DHGDNAKQFAYM--VE-------------WGMTPLEA 343 (408)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTTB-CTTCGGGHHHHH--HH-------------TTCCHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC-CCchHHHHHHHH--HH-------------cCCCHHHH
Confidence 0124678889999999999998642 223456665542 11 14999999
Q ss_pred HHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCe
Q 012333 374 LRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 446 (466)
Q Consensus 374 l~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 446 (466)
++++|.|||+++|++ ++|+|++||+|||||+|.+ |++++ ..+ .+|..||++|++|+++..
T Consensus 344 l~~~T~n~A~~lgl~-~~G~i~~G~~ADlvvld~~-----p~~~~-~~~------~~v~~v~~~G~~v~~~~~ 403 (408)
T 3be7_A 344 IQASTIKTATLFGIE-NIGQIKEGFDADIVGVIEN-----PLANI-RTL------EEVAFVMKEGKVYKREGH 403 (408)
T ss_dssp HHTTTHHHHHHHTCS-SCSSCCTTSBCCEEEESSC-----TTTCG-GGT------TSCCEEEETTEEEEECCC
T ss_pred HHHHHHHHHHHhCCC-cccccCCCCccCEEEECCC-----chhhH-HHh------hceeEEEECCEEEecccc
Confidence 999999999999997 7899999999999999999 44443 222 479999999999998754
No 26
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=100.00 E-value=2.6e-38 Score=312.28 Aligned_cols=381 Identities=18% Similarity=0.146 Sum_probs=236.0
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEE-ECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccc-
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFV-VQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK- 95 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I-~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~- 95 (466)
..+++|+|++|+++++ ..++.+++|+| +||||++|++..... .+ .+.++||++|++|+|||||+|+|+......
T Consensus 12 ~~~~li~n~~i~~~~~-~~~~~~~~v~I~~~g~I~~Vg~~~~~~--~~-~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~ 87 (458)
T 2p9b_A 12 EPFALAHATIVTGDKA-GTILRNMTIVVGADGRIEQVAPSIETS--IP-AEYHYLDGTGKIVMPGLINAHTHLFSQGKPL 87 (458)
T ss_dssp CCEEEEEEEEECCCTT-CCEEEEEEEEECTTSBEEEEEEGGGCC--CC-TTCEEEECTTCEEEECEEEEEECSCC-----
T ss_pred CCcEEEEeeEEEeCCC-CccccCcEEEEecCCEEEEEeccccCC--CC-CCCeEEECCCCEEccceeeeeeccccccccc
Confidence 4689999999998654 24556789999 999999998732211 01 256899999999999999999999765432
Q ss_pred cccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-CHHHHHHHHHHhCC----eEEeeccc
Q 012333 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGL----RACLVQST 170 (466)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-~~~~~~~~~~~~g~----~~~~~~~~ 170 (466)
......+...|.....|. ..++....+.........++++||||+++++.. ......+...+.+. +.......
T Consensus 88 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~g~r~~~~g~~ 165 (458)
T 2p9b_A 88 NPKLATPKGQRMVATFAH--SPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGYEVVTLRDQIDAGQILGPRILASGPL 165 (458)
T ss_dssp --------------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSSHHHHHHHHHHTTSSCCCEEECCCSC
T ss_pred cccccchhhhhhhhhhhh--hcccccHHHHHHHHHHHHHHHcCCcEEEeCCCCccccHHHHHHHHcCCCCCCeEEecccc
Confidence 111111222222211121 112222333344457788999999999998753 23333333334343 44332222
Q ss_pred ccCCCCCCc-cc--ccCChHHHHHHHHHHHHHhccCCCCCeEEEEe-----e-----cccccCCHHHHHHHHHHHHHcCC
Q 012333 171 MDCGEGLPA-SW--AVRTTDDCIQSQKELYAKHHHAADGRIRIWFG-----I-----RQIMNATDRLLLETRDMAREFKT 237 (466)
Q Consensus 171 ~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~-----~~~~~~~~~~l~~~~~~a~~~~~ 237 (466)
+....+... .+ ..... .+..+.+++....+...++++.. + .+.+..+++.+.++++.+++.|+
T Consensus 166 ~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~ 241 (458)
T 2p9b_A 166 MAIPEGHGAPLIALTSGTP----EEARTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGV 241 (458)
T ss_dssp EECCCSSCCCCEECCSCCH----HHHHHHHHHHHHTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTC
T ss_pred cccCCCCCccccCccCCCH----HHHHHHHHHHHHcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCC
Confidence 111101110 00 01111 22233333333344556776542 1 12346788999999999999999
Q ss_pred ccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHH------hcCCeEEECccc--hh-
Q 012333 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLS------RAGVKVSHCPAS--AM- 308 (466)
Q Consensus 238 ~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~------~~g~~~~~~p~~--~~- 308 (466)
++.+|+.+.... ...++ .+ ...+.|+.+++++.+++++ +.|+.+. |.. ..
T Consensus 242 ~v~~H~~~~~~i--------------~~~~~-~G----~~~i~H~~~~~~~~~~~~~~~~~~~~~g~~v~--p~~~~~~~ 300 (458)
T 2p9b_A 242 IVGAHAQSPEGV--------------RRSLL-AG----VDTIEHGSVLDDELIGMFRHNPNALRGYSALI--PTLSAGLP 300 (458)
T ss_dssp CEEEEECSHHHH--------------HHHHH-HT----CSEEEECCCCCHHHHHHHHCCTTSTTSCCEEE--CCHHHHHH
T ss_pred eEEEEeCCHHHH--------------HHHHH-cC----CCEEEECCCCCHHHHHHHhcccccccCCeEEE--eecchhhH
Confidence 999999652211 11111 11 2458999999999999999 8998653 443 11
Q ss_pred hc----------------------cCCccHHHHHHcCCcEEEccCCCC-CCCCCCHHHHHHHHHHHhcccccccCCCCCC
Q 012333 309 RM----------------------LGFAPIKEMLHADICVSLGTDGAP-SNNRMSIVDEMYLASLINKGREVFANGTTDP 365 (466)
Q Consensus 309 ~~----------------------~~~~~~~~~~~~gi~~~~gsD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (466)
.. ....+++.+++.|+++++|||++. ..+...++.+++... ..
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~~~~~~~~~~~~e~~~~~--~~------------ 366 (458)
T 2p9b_A 301 LTLLGQDVTGITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFVPQYATWRELELLV--AY------------ 366 (458)
T ss_dssp HHHSCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTTSTTSCTTCHHHHHHHHH--HH------------
T ss_pred HHhhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCCccccHHHHHHHHH--Hh------------
Confidence 00 012467888999999999999753 233445676665432 11
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEEC-
Q 012333 366 AALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN- 444 (466)
Q Consensus 366 ~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~- 444 (466)
.++|++++++++|.|||+++|+++++|+|++||.|||||+|.+++ .++ ..+ .+|..||++|++||++
T Consensus 367 ~~ls~~~al~~~T~~~A~~lgl~~~~Gsi~~Gk~ADlvvld~~p~-----~~~-~~~------~~v~~v~v~G~~v~~~~ 434 (458)
T 2p9b_A 367 AGFSPAEALHAATAVNASILGVDAETGSLEVGKSADLLVLNANPL-----DDL-RAL------EHPALVIAAGHPVWRPG 434 (458)
T ss_dssp HCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTT-----TCG-GGG------TSCSEEEETTEECCSCC
T ss_pred cCCCHHHHHHHHHHHHHHHhCCcCCCCccCCCCcCCEEEECCCch-----hCH-HHh------ccceEEEECCEEEecCc
Confidence 149999999999999999999988899999999999999999943 332 221 4899999999999999
Q ss_pred -CeeeeccHHHH
Q 012333 445 -KKILLLMRGRL 455 (466)
Q Consensus 445 -g~~~~~~~~~~ 455 (466)
+++..++++..
T Consensus 435 ~~~~~~~d~~~~ 446 (458)
T 2p9b_A 435 PKRFADIDALLD 446 (458)
T ss_dssp CCCCHHHHHHHH
T ss_pred hhhhhhHhHHHH
Confidence 88877765543
No 27
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=100.00 E-value=1.5e-37 Score=303.28 Aligned_cols=355 Identities=19% Similarity=0.212 Sum_probs=234.8
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCC--eEEeCCCcEEeecccccccCCccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMAD--QIIDLQSQILLPGFVNTHVHTSQQLA 94 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~--~~iD~~G~~v~PG~ID~H~H~~~~~~ 94 (466)
..++++|+|++|+++++ ..++.+++|+|+||+|++|++.. . + ++. ++||++|++|+|||||+|+|+....
T Consensus 5 ~~~~~li~n~~v~~~~~-~~~~~~~~v~I~~g~I~~vg~~~-~----~-~~~~~~viD~~g~~v~PGlID~H~H~~~~~- 76 (418)
T 2qs8_A 5 VDSKTLIHAGKLIDGKS-DQVQSRISIVIDGNIISDIKKGF-I----S-SNDFEDYIDLRDHTVLPGLMDMHVHFGQEY- 76 (418)
T ss_dssp --CCEEEEEEEECCSSC-SSCEEEEEEEEETTEEEEEEESC-C----C-CTTSSEEEEEEEEEEEECEEEEEECTTCCC-
T ss_pred CCccEEEEeeEEEeCCC-CccccCcEEEEECCEEEEEeCCC-C----C-CCCcceEEECCCCEECCCeeeeeeccccCC-
Confidence 45689999999998654 24556789999999999999743 1 1 356 8999999999999999999996532
Q ss_pred ccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-CHHHHHHHHHHhCC----eEEeecc
Q 012333 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGL----RACLVQS 169 (466)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-~~~~~~~~~~~~g~----~~~~~~~ 169 (466)
+...| . ....++.+.+.........++++||||+++++.. ......+...+.|. +......
T Consensus 77 -------~~~~~-~------~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~ 142 (418)
T 2qs8_A 77 -------QSKAQ-A------PIKVEREMQAILATQHAYVTFKSGFTTVRQVGDSGLVAISLRDAINSGKLAGPRIFAAGK 142 (418)
T ss_dssp -------CCTTT-S------CSCCCHHHHHHHHHHHHHHHHHTTEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEECCS
T ss_pred -------CCCch-h------hhcCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCccccHHHHHHHHCCCCCCCeEEecCc
Confidence 11223 0 1123455555555667888999999999998643 23323344444443 5544332
Q ss_pred cc--cCCC-----CCCcccccC-----ChHHHHHHHHHHHHHhccCCCCCeEEEEee--------cccccCCHHHHHHHH
Q 012333 170 TM--DCGE-----GLPASWAVR-----TTDDCIQSQKELYAKHHHAADGRIRIWFGI--------RQIMNATDRLLLETR 229 (466)
Q Consensus 170 ~~--~~~~-----~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~l~~~~ 229 (466)
.. ..+. .+.+.+... ......++..+.+++....+...++++... .+....+++.+.+++
T Consensus 143 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~ 222 (418)
T 2qs8_A 143 TIATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVV 222 (418)
T ss_dssp CBEETTCTTCTTTTCCGGGCCCCCGGGTEECSHHHHHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHH
T ss_pred cccccCCCccccccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHH
Confidence 21 1111 111111000 011112233344443322334566665321 123567899999999
Q ss_pred HHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccch--
Q 012333 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASA-- 307 (466)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~-- 307 (466)
+.|++.|+++.+|+.+.... ...++ .+ ...+.|+.+++++.++++++.|+.+ ||...
T Consensus 223 ~~A~~~g~~v~~H~~~~~~i--------------~~~~~-~g----~~~i~H~~~~~~~~i~~l~~~gv~v--~p~~~~~ 281 (418)
T 2qs8_A 223 SAAKDYGMWVAVHAHGAEGM--------------KRAIK-AG----VDSIEHGTFMDLEAMDLMIENGTYY--VPTISAG 281 (418)
T ss_dssp HHHHHTTCEEEEEECSHHHH--------------HHHHH-HT----CSEEEECTTCCHHHHHHHHHHTCEE--ECCHHHH
T ss_pred HHHHHcCCEEEEEECCHHHH--------------HHHHH-cC----CCEEEECCCCCHHHHHHHHHCCCEE--eeeechH
Confidence 99999999999999643211 11111 11 2468999999999999999999865 45421
Q ss_pred --hh----ccC-----------------CccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCC
Q 012333 308 --MR----MLG-----------------FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTD 364 (466)
Q Consensus 308 --~~----~~~-----------------~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (466)
+. ..+ ..+++.+++.|+++++|||++. .+..+++.+++.. ..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~-~~~~~~~~e~~~~--~~------------ 346 (418)
T 2qs8_A 282 EFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGV-QKHGTNWKEFVYM--VE------------ 346 (418)
T ss_dssp HHHHHHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCCCCCBTT-BCTTCTTHHHHHH--HH------------
T ss_pred HHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCCCCc-CCcchHHHHHHHH--HH------------
Confidence 10 001 2357889999999999999864 2334567776643 21
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEE
Q 012333 365 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 442 (466)
Q Consensus 365 ~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 442 (466)
.++|++++++++|.|||+++|+++++|+|++||+|||||+|.+ |++++ ..+ .+|+.||++|+++.
T Consensus 347 -~gls~~eal~~~T~n~A~~lg~~~~~G~l~~G~~ADlvvld~~-----~~~~~-~~~------~~i~~v~~~G~~~~ 411 (418)
T 2qs8_A 347 -NGMPAMKAIQSATMETAKLLRIEDKLGSIESGKLADLIAVKGN-----PIEDI-SVL------ENVDVVIKDGLLYE 411 (418)
T ss_dssp -TTCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSC-----TTTCG-GGG------GGEEEEEETTEEEE
T ss_pred -cCCCHHHHHHHHHHHHHHHhCCCCCCcccCCCCccCEEEECCC-----hhhCH-HHh------cCccEEEECCEEEe
Confidence 1499999999999999999999888999999999999999999 44442 322 58999999999765
No 28
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=4.3e-37 Score=303.90 Aligned_cols=377 Identities=16% Similarity=0.163 Sum_probs=225.8
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
|++++|+|++|+++++ . .+++|+|+||+|++|++.... + .+.++||++|++|+|||||+|+|+.....
T Consensus 1 m~~~li~~~~v~~~~~---~-~~~~v~I~~g~I~~ig~~~~~----~-~~~~viD~~g~~v~PGlID~H~H~~~~~~--- 68 (458)
T 1gkr_A 1 MFDVIVKNCRLVSSDG---I-TEADILVKDGKVAAISADTSD----V-EASRTIDAGGKFVMPGVVDEHVHIIDMDL--- 68 (458)
T ss_dssp CEEEEEEEEEEEETTE---E-EEEEEEEETTEEEEEESCCTT----C-CEEEEEECTTCEEEECEEEEEEECCCGGG---
T ss_pred CceEEEECcEEECCCC---c-eeeeEEEECCEEEEecCCCCC----C-CCCeEEeCCCCEEecCEEEeeecccCCCC---
Confidence 4689999999997542 2 678999999999999875321 1 24579999999999999999999953110
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecC-ccC-----HHHH---HHHHHHhCCeEEeec
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQH-----VSEM---AKAVELLGLRACLVQ 168 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~-~~~-----~~~~---~~~~~~~g~~~~~~~ 168 (466)
....++. ....+.++++||||+++++ ... ...+ .+.....+++.....
T Consensus 69 -------------------~~~~~~~----~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (458)
T 1gkr_A 69 -------------------KNRYGRF----ELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVDFALYG 125 (458)
T ss_dssp -------------------TTTSCCH----HHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred -------------------CCchhHH----HHHHHHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCceeEEEEe
Confidence 0011111 1223457899999999987 321 1122 222222222211100
Q ss_pred ccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecc---cccCCHHHHHHHHHHHHHcCCccceeccC
Q 012333 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAE 245 (466)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 245 (466)
. ... .. .++..+.+ +.+...++.++.++. .+..+.+.+.++++.+++++.++.+|+.+
T Consensus 126 ~-------~~~----~~----~~~~~~~~----~~g~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 186 (458)
T 1gkr_A 126 G-------GVP----GN----LPEIRKMH----DAGAVGFKSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVVHAEN 186 (458)
T ss_dssp E-------CCT----TC----HHHHHHHH----HTTCCEEEEESSCSBTTTBCBCCHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred c-------cCC----CC----HHHHHHHH----HcCCcEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEECCC
Confidence 0 000 01 12222322 233455665555443 35678999999999999999999999965
Q ss_pred CcchhHHH--HhhcCCCCchHHH------------Hhhhc-cCCCCeeEEEeecCCh-hhHHHHH---hcC--CeEEECc
Q 012333 246 IPYENQVV--MDTRKVDHGTVTF------------LDKIE-FLQNNLLSAHTVWVNH-TEIGLLS---RAG--VKVSHCP 304 (466)
Q Consensus 246 ~~~~~~~~--~~~~~~~~~~~~~------------~~~~~-~~~~~~~~~H~~~~~~-~~~~~~~---~~g--~~~~~~p 304 (466)
........ ....+.. ..... +.... +........|..|++. +.++.+. +.| +.+.+||
T Consensus 187 ~~~~~~~~~~~~~~G~~-~~~~h~~~~~~~~~~~~~~~~~~la~~~g~~~h~~H~~~~~~~~~i~~~~~~G~~v~~~~~p 265 (458)
T 1gkr_A 187 ETIIQALQKQIKAAGGK-DMAAYEASQPVFQENEAIQRALLLQKEAGCRLIVLHVSNPDGVELIHQAQSEGQDVHCESGP 265 (458)
T ss_dssp HHHHHHHHHHHHHTTCC-SHHHHHHHSCHHHHHHHHHHHHHHHHHHCCEEEECCCCSHHHHHHHHHHHHTTCCEEEEECH
T ss_pred HHHHHHHHHHHhhcCcc-chhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEEch
Confidence 32211111 1111210 01111 11110 1111112346666654 4455544 366 5567788
Q ss_pred cchhh-----------cc---------CCccHHHHHHcCCcEEEccCCCCCCCC------CCHHH--------HHHHHHH
Q 012333 305 ASAMR-----------ML---------GFAPIKEMLHADICVSLGTDGAPSNNR------MSIVD--------EMYLASL 350 (466)
Q Consensus 305 ~~~~~-----------~~---------~~~~~~~~~~~gi~~~~gsD~~~~~~~------~~~~~--------~~~~~~~ 350 (466)
..... .. ...+++++++.|+.+++|||+.+.+.. .+++. ++.....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~l~~~~~~G~~~~lgtD~~~~~~~~k~~g~~~~~~~~~~~~g~~~~l~~~ 345 (458)
T 1gkr_A 266 QYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQLENGLIDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMM 345 (458)
T ss_dssp HHHSCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHHHHTCCCEECCCEECCCGGGTGGGGTCGGGSCCCBCCTTTHHHHH
T ss_pred HHheeCHHHhhccCceEEEcCCCCCHHHHHHHHHHHhCCCceEEEeCCCCCChHHhccccCCHhHCCCCcccHHHHHHHH
Confidence 74310 01 112556788999999999998665322 23333 1122222
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccC---
Q 012333 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMR--- 427 (466)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~--- 427 (466)
+.+.. ...++|++++++++|.|||+++|+++++|+|++|++|||||+|.+.....|..++.+.+.+...
T Consensus 346 ~~~~~--------~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~g~ 417 (458)
T 1gkr_A 346 LTNGV--------NKGRLSLERLVEVMCEKPAKLFGIYPQKGTLQVGSDADLLILDLDIDTKVDASQFRSLHKYSPFDGM 417 (458)
T ss_dssp HHHTG--------GGTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEEESCCCEECCGGGCSSSCCCCTTTTC
T ss_pred HHHHH--------HhCCCCHHHHHHHHhhhHHHHhCCCCCCccCCCCCcCCEEEEcCCcceEEcHHHccccCCCCCcCCC
Confidence 22110 1125999999999999999999998789999999999999999984332333343333333321
Q ss_pred --CCCeeEEEEccEEEEECCeeeeccH-HHHHH
Q 012333 428 --TENVVSVMCNGQWVMKNKKILLLMR-GRLFQ 457 (466)
Q Consensus 428 --~~~v~~v~v~G~~v~~~g~~~~~~~-~~~~~ 457 (466)
..+|..||++|++||++|++++... |++++
T Consensus 418 ~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~ 450 (458)
T 1gkr_A 418 PVTGAPVLTMVRGTVVAEKGEVLVEQGFGQFVT 450 (458)
T ss_dssp EECCEEEEEEETTEEEEETTEECSCTTCCCBCC
T ss_pred EeeeEEEEEEECCEEEEECCccccCCCCCeecC
Confidence 3579999999999999999987765 66663
No 29
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=100.00 E-value=3.7e-38 Score=305.00 Aligned_cols=364 Identities=19% Similarity=0.209 Sum_probs=226.5
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
++++++|+|++|+++++ .... ++|+|+||+|++|++..+ + .+.++||++|++|+|||||+|+|+.......
T Consensus 3 ~~~~~~i~~~~i~~~~~--~~~~-~~v~i~~g~I~~i~~~~~-----~-~~~~~id~~g~~~~Pg~~d~h~h~~~~~~~~ 73 (396)
T 3ooq_A 3 LSVKILFKNATVFPITS--RPFK-GDVLVSNGKVEKVGENIE-----D-PDAEIVDLTGKFLFPGFVDAHSHIGLFEEGV 73 (396)
T ss_dssp ---CEEEEEEEECCSSS--CCEE-EEEEEETTEEEEEESCCC-----C-TTSEEEECTTCEEEECEEEEEECTTTSCTTS
T ss_pred CcceEEEECcEEEeCCC--CeEE-eEEEEECCEEEEecCCCC-----C-CCCeEEECCCCEEecCEEecccccCccccCc
Confidence 45679999999997653 3444 899999999999998643 1 4678999999999999999999998655422
Q ss_pred ccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc----------------CHHHHHHHHHHh
Q 012333 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----------------HVSEMAKAVELL 160 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~----------------~~~~~~~~~~~~ 160 (466)
. ....|+....|+....+...+.+......+.+++++|||++.++++. ........ ...
T Consensus 74 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~gs~~~i~G~~~~~~~~~~~~~~~~~~-~~~ 148 (396)
T 3ooq_A 74 G----YYYSDGNEATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIVPGSANPVGGQGSVIKFRSIIVEECIVK-DPA 148 (396)
T ss_dssp C----GGGCCSCCTTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEECCCSSSSEEEEEEEEESCCSSHHHHEEE-EEE
T ss_pred c----ccccccccccCccCccccHhhhcCcCcHHHHHHHhCCeEEEeccCCCCCcccCeeEEEeccCCCHHHceec-CCc
Confidence 1 11355566667777777776666555556678999999999997421 11110000 111
Q ss_pred CCeEEeecccccC-C-CCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCc
Q 012333 161 GLRACLVQSTMDC-G-EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG 238 (466)
Q Consensus 161 g~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 238 (466)
+++..++...... + .+..+. ......+.+.+..+..+.+..... ......+.+..+.. ..+.+..+.+.+++
T Consensus 149 ~i~~~~g~~~~~~~~~~~~~p~-~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~----~~e~l~~~~~~~~~ 222 (396)
T 3ooq_A 149 GLKMAFGENPKRVYGERKQTPS-TRMGTAGVIRDYFTKVKNYMKKKE-LAQKEGKEFTETDL----KMEVGEMVLRKKIP 222 (396)
T ss_dssp EEEEECSHHHHHHHHHTTCSCS-SHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCCCCCCH----HHHHHHHHHTTSSC
T ss_pred EEEEEcCCCCcccccccCCCCc-cHHHHHHHHHHHHHHHHHHHHhhh-hhhhccCCCCCcCh----hHHHHHHHHcCCCc
Confidence 2222221111000 0 000000 000111222222222222111100 00000111222222 22333344578999
Q ss_pred cceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECcc----chhhc--cC
Q 012333 239 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPA----SAMRM--LG 312 (466)
Q Consensus 239 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~----~~~~~--~~ 312 (466)
+.+|+.+...... ..+.+... +.+..+.|+..... .++++++.|+.+++||. ++... .+
T Consensus 223 v~iHa~~~~~i~~-----------~~~~~~~~---g~~~~i~H~~~~~~-~~~~l~~~gv~v~~~P~~~~~~~~~~~~~~ 287 (396)
T 3ooq_A 223 ARMHAHRADDILT-----------AIRIAEEF---GFNLVIEHGTEAYK-ISKVLAEKKIPVVVGPLLTFRTKLELKDLT 287 (396)
T ss_dssp EEEEECSHHHHHH-----------HHHHHHHH---TCCEEEEECTTGGG-GHHHHHHHTCCEEECCCSSCCCSGGGTTCC
T ss_pred EEEEECchhHHHH-----------HHHHHHHc---CCCEEEecCchHHH-HHHHHHHCCCCEEECcccccccchhHHhhh
Confidence 9999976442111 22333333 34678999998764 69999999999999995 33333 45
Q ss_pred CccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCccc
Q 012333 313 FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (466)
Q Consensus 313 ~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G 392 (466)
..+++.+++.|+++++|||++... ...+...... .. ..+++++++++++|.|||+++|+++++|
T Consensus 288 ~~~~~~l~~~Gv~v~lgtD~~~~~-~~~l~~~~~~---~~------------~~gl~~~~al~~~T~n~A~~lg~~~~~G 351 (396)
T 3ooq_A 288 METIAKLLKDGVLIALMCDHPVIP-LEFATVQAAT---AM------------RYGAKEEDLLKILTVNPAKILGLEDRIG 351 (396)
T ss_dssp TTHHHHHHHTTCCEEECCTTTTSC-GGGHHHHHHH---GG------------GGTCCHHHHHHTTTHHHHHHTTCTTTSS
T ss_pred hHHHHHHHHCCCEEEEEcCCCccC-ccHHHHHHHH---HH------------HcCCCHHHHHHHHHHHHHHHhCCCCCee
Confidence 679999999999999999996432 1122222211 11 1259999999999999999999988899
Q ss_pred ccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCe
Q 012333 393 SLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 446 (466)
Q Consensus 393 ~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 446 (466)
+|++|+.|||||+|.+++. . ..+|..||++|++||+..+
T Consensus 352 ~i~~G~~ADlvv~d~~~~~-----~----------~~~v~~v~~~G~~v~~~~~ 390 (396)
T 3ooq_A 352 SIEPGKDADLVVWSGHPFD-----M----------KSVVERVYIDGVEVFRREG 390 (396)
T ss_dssp SCCTTSBCCEEEESSCTTS-----T----------TCCEEEEEETTEEEEECC-
T ss_pred eECCCCcCCEEEECCCccc-----c----------ccceeEEEECCEEEeCCCC
Confidence 9999999999999999443 2 2589999999999999754
No 30
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=100.00 E-value=3e-36 Score=301.78 Aligned_cols=386 Identities=16% Similarity=0.163 Sum_probs=229.7
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
+++++|+|++|+++++ ..+++|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|+......+
T Consensus 2 ~m~~li~n~~vv~~~~----~~~~~v~I~~g~I~~Ig~~~~~----~-~~~~viD~~g~~v~PGlID~H~H~~~~~~~~- 71 (559)
T 2fty_A 2 IYDLIIKNGIICTASD----IYAAEIAVNNGKVQLIAASIDP----S-LGSEVIDAEGAFITPGGIDAHVHVDEPLKLL- 71 (559)
T ss_dssp CEEEEEESCEEECSSC----EEECEEEEETTEEEEEESCCCG----G-GEEEEEECTTCEEEECEEECCBCCCCTTCTT-
T ss_pred CceEEEECcEEEcCCC----ceeeeEEEECCEEEEecCCCCC----C-CCCeEEeCCCCEEEcCEEeeccCcCcccccc-
Confidence 4689999999997543 2567999999999999975321 1 2457999999999999999999996432100
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-----HHHHHHHH----HHhCCe-EEee
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAV----ELLGLR-ACLV 167 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-----~~~~~~~~----~~~g~~-~~~~ 167 (466)
. ...++.+ .....++++||||+++++... .....++. ...+.+ ....
T Consensus 72 ------------------~-~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 128 (559)
T 2fty_A 72 ------------------G-DVVDTME----HATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCD 128 (559)
T ss_dssp ------------------S-CCSCCHH----HHHHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSE
T ss_pred ------------------C-CCHHHHH----HHHHHHHhCcEEEEEECcCcccCCcchHHHHHHHHHHHHHHHhhcceeE
Confidence 0 0111211 223557899999999986432 12134444 444443 1111
Q ss_pred cccccCCCCCCcccccCChHH---HH-HHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceec
Q 012333 168 QSTMDCGEGLPASWAVRTTDD---CI-QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 243 (466)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 243 (466)
..... . .. .+. ....+ .+ .+..++++++ +...+++++.++. ..++.+++.++++.|++++.++++|+
T Consensus 129 ~~~~~-~--~~-~~~-~~~~~~g~~l~~~~~~l~~~~---G~~~iki~~~~~~-~~~s~e~l~~~~~~A~~~g~~v~~H~ 199 (559)
T 2fty_A 129 YGLHL-I--LF-QIE-KPSVEARELLDVQLQAAYNDY---GVSSVKMFMTYPG-LQISDYDIMSAMYATRKNGFTTMLHA 199 (559)
T ss_dssp EEEEE-E--CC-CCC-SSHHHHHHHHHHHHHHHHHHH---CCCEEEEESSSTT-TBCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred EEeee-e--ec-cCc-CCCchhhhhHHHHHHHHHHHC---CCCEEEEEecCCC-CcCCHHHHHHHHHHHHhCCCEEEEEC
Confidence 10100 0 00 010 01222 33 4444444332 3456777666665 57889999999999999999999999
Q ss_pred cCCcchhHHH--HhhcCCC--------Cch-------HHHHhhhccCCCCeeEEEeecCChh----hHHHHHhcCCeE--
Q 012333 244 AEIPYENQVV--MDTRKVD--------HGT-------VTFLDKIEFLQNNLLSAHTVWVNHT----EIGLLSRAGVKV-- 300 (466)
Q Consensus 244 ~~~~~~~~~~--~~~~~~~--------~~~-------~~~~~~~~~~~~~~~~~H~~~~~~~----~~~~~~~~g~~~-- 300 (466)
.+........ ....+.. ... ...+.....++.+ .|..|++.+ .++.+++.|+.+
T Consensus 200 e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~~~E~~av~~~i~la~~~g~~---vhi~H~s~~~~~~~i~~ak~~G~~Vt~ 276 (559)
T 2fty_A 200 ENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTP---ILFVHVSSPQAAEVIKQAQTKGLKVYA 276 (559)
T ss_dssp CCHHHHHHHHHHHHHTTCCSTTHHHHTSCHHHHHHHHHHHHHHHHHTTCC---EEECSCCCHHHHHHHHHHHHTTCCEEE
T ss_pred CChHHHHHHHHHHHhcCCCChhhcccCCCHHHHHHHHHHHHHHHHHhCCC---EEEEcCCCHHHHHHHHHHHHcCCceEE
Confidence 6532211110 0111110 000 0111122223333 455555433 344445577665
Q ss_pred EECccchhh-----------------------------------------cc---------CCccHHHHHHcCCcEEEcc
Q 012333 301 SHCPASAMR-----------------------------------------ML---------GFAPIKEMLHADICVSLGT 330 (466)
Q Consensus 301 ~~~p~~~~~-----------------------------------------~~---------~~~~~~~~~~~gi~~~~gs 330 (466)
.+||..... .. ...+++++++.|+++++||
T Consensus 277 e~~p~~l~l~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~PplR~~~~~~~l~~~l~~G~~~~igT 356 (559)
T 2fty_A 277 ETCPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGS 356 (559)
T ss_dssp EECHHHHHCCGGGGSCC--------CCSCCGGGCSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHHHTTSCSEECC
T ss_pred eecCcccccCHHHhhccccccccccccccCccccccccccccCccccccCcEECCCCCCHHHHHHHHHHHhcCceEEEEe
Confidence 678872110 00 1123677899999999999
Q ss_pred CCCCCCCC-------------------CCHHH--------HHHHHHHHhcccccccCCCCCCCCC-CHHHHHHHHhHHHH
Q 012333 331 DGAPSNNR-------------------MSIVD--------EMYLASLINKGREVFANGTTDPAAL-PAETVLRMATINGA 382 (466)
Q Consensus 331 D~~~~~~~-------------------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l-s~~~al~~~T~~~A 382 (466)
|+.+.+.. .+++. +++...+..+. .....+ +++++++++|.|||
T Consensus 357 D~~p~~~~~k~~~~~k~~~~~~~~~~~~~f~~~~~G~~g~e~~l~~ll~~~--------v~~~~l~~~~~~~~~~t~~~A 428 (559)
T 2fty_A 357 DHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYG--------YLRGNLTSMMKLVEIQCTNPA 428 (559)
T ss_dssp CBCCCBSSCCSSTTBGGGGEEGGGTEESCGGGSCCCBCCTTTHHHHHHHHT--------TTTTSSSCHHHHHHHHTHHHH
T ss_pred CCCCCChhhccccccccccccccccccCCHhhCCCCCccHHHHHHHHHHHH--------HHcCCCCCHHHHHHHHhHHHH
Confidence 99876433 12221 23333222221 112348 99999999999999
Q ss_pred HHcCCCCcccccccC-CccCEEEEcCCC--------CCCCCcCCcccceecc-----cCCCCeeEEEEccEEEEECCeee
Q 012333 383 KSVLWDNDIGSLEAG-KKADMVVVDPFS--------WPMVPVHDRITSLVYC-----MRTENVVSVMCNGQWVMKNKKIL 448 (466)
Q Consensus 383 ~~lgl~~~~G~i~~G-~~ADlvv~d~~~--------~~~~~~~~~~~~~~~~-----~~~~~v~~v~v~G~~v~~~g~~~ 448 (466)
+++|+++++|+|++| ++|||||||.+. ....+.++..+...+. .-..+|..||++|++||++|+++
T Consensus 429 ~~lgl~~~~G~i~~G~~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~s~~~~sp~~g~~~~g~v~~t~v~G~~v~~~g~~~ 508 (559)
T 2fty_A 429 KVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYTPFEGIEIKNWPRYTIVKGKIVYKEGEIL 508 (559)
T ss_dssp HHTTCTTTSSSCCTTTSBCCEEEECCSSCCCCCTTSCSBCCTGGGTSSCSCCTTTTCBCSCCEEEEEETTEEEEETTEEC
T ss_pred HHhCCCCCCceeeccCCcCCEEEEeCcccccccCCccEEEchHHhcccCCCCCccCCEecceEEEEEECCEEEEECCeec
Confidence 999997779999999 999999999984 1112222211111111 01357999999999999999987
Q ss_pred ecc-HHHHH
Q 012333 449 LLM-RGRLF 456 (466)
Q Consensus 449 ~~~-~~~~~ 456 (466)
+.. .|+++
T Consensus 509 ~~~~~G~~~ 517 (559)
T 2fty_A 509 KENADGKYL 517 (559)
T ss_dssp GGGCCCCBC
T ss_pred cCCcCCeee
Confidence 653 25554
No 31
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=100.00 E-value=3.5e-36 Score=296.45 Aligned_cols=380 Identities=17% Similarity=0.226 Sum_probs=226.5
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
|+++|+|++|++++ . ..+++|+|+||+|++|++.... .+.++||++|++|+|||||+|+|+.....
T Consensus 1 M~~~i~n~~v~~~~---~-~~~~~v~i~~g~I~~i~~~~~~------~~~~viD~~g~~v~PG~ID~H~H~~~~~~---- 66 (461)
T 3sfw_A 1 MKKWIRNGTVVTAS---D-TYQADVLIDGEKVVAIGSDLQA------TDAEVIDATGYYLLPGGIDPHTHLDMPFG---- 66 (461)
T ss_dssp CEEEEESCEEECSS---C-EEECEEEEETTEEEEEESCCCC------SSCEEEECTTCEEEECEEEEEECTTCEET----
T ss_pred CcEEEECeEEECCC---C-cEEEEEEEECCEEEEEeCCCCC------CCCeEEECCCCEEEeeeEEeEeccCcCCC----
Confidence 36899999999743 2 3567999999999999985421 46789999999999999999999954210
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc----CHHHHHHHH-HHhCCeEEeecccccC
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAV-ELLGLRACLVQSTMDC 173 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~----~~~~~~~~~-~~~g~~~~~~~~~~~~ 173 (466)
.....++ + ....+.++.+||||+++++.. ......+.. .....+.........
T Consensus 67 -----------------~~~~~e~-~---~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~- 124 (461)
T 3sfw_A 67 -----------------GTVTSDN-F---FTGTKAAAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGFHL- 124 (461)
T ss_dssp -----------------TEECSCC-H---HHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEE-
T ss_pred -----------------CcccHhH-H---HHHHHHHHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEEEE-
Confidence 0011111 1 122355789999999996532 222222222 211111111000000
Q ss_pred CCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHH
Q 012333 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 253 (466)
+.. ......+.+..++.++ .+...++.++..++.+..+.+.+.++++.++++|.++.+|+.+........
T Consensus 125 --~~~-----~~~~~~~~~~~~l~~~---~G~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~ 194 (461)
T 3sfw_A 125 --MVS-----DANDHVLEELESVVNN---EGITSLKVFMAYKNVLMADDETLFKTLIRAKELGALVQVHAENGDVLDYLT 194 (461)
T ss_dssp --ECS-----CCCHHHHHHHHHHHHT---SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH
T ss_pred --EEe-----CCCHHHHHHHHHHHHh---CCCCEEEEEEecCCCcccCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHH
Confidence 000 1122333333333321 445566666666555678899999999999999999999976533221111
Q ss_pred HhhcCCC----------Cc----h---HHHHhhhccCCCCeeEEEeecCCh----hhHHHHHhcCCeE--EECccchhh-
Q 012333 254 MDTRKVD----------HG----T---VTFLDKIEFLQNNLLSAHTVWVNH----TEIGLLSRAGVKV--SHCPASAMR- 309 (466)
Q Consensus 254 ~~~~~~~----------~~----~---~~~~~~~~~~~~~~~~~H~~~~~~----~~~~~~~~~g~~~--~~~p~~~~~- 309 (466)
......+ .. . ...+......+. -.|..|++. +.++.+++.|..+ .+||+....
T Consensus 195 ~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~---~~hi~H~s~~~~l~~i~~ak~~G~~vt~e~~ph~l~l~ 271 (461)
T 3sfw_A 195 KQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADA---QLYVVHVSCADAVRRIAEAREKGWNVYGETCPQYLVLD 271 (461)
T ss_dssp HHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTC---EEEECSCCSHHHHHHHHHHHHTTCEEEEEECHHHHHCC
T ss_pred HHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCC---CEEEEecCcHHHHHHHHHHHhcCCcEEEeeccceEEEc
Confidence 1100000 00 0 111222222233 346666665 6677788888776 578752210
Q ss_pred -------------ccCCcc---------HHHHHHcCCcEEEccCCCCCCCCC------CHH---------HHHHHHHHHh
Q 012333 310 -------------MLGFAP---------IKEMLHADICVSLGTDGAPSNNRM------SIV---------DEMYLASLIN 352 (466)
Q Consensus 310 -------------~~~~~~---------~~~~~~~gi~~~~gsD~~~~~~~~------~~~---------~~~~~~~~~~ 352 (466)
....+| ++++++.|+.++++||+.+..... ..+ .+........
T Consensus 272 ~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l~~G~~~~i~sD~~p~~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~ 351 (461)
T 3sfw_A 272 ITALEKPDFEGAKYVWSPPLREKWNQDVLWSALKNGILQTVGSDHCPFNFSGQKELGRRDFTKIPNGGPIIEDRMTILFS 351 (461)
T ss_dssp GGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHHHTTSSCEECCCBCCCCTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHH
T ss_pred HHHhcCccccCCcEEEcCCCCChHHHHHHHHHHhcCCceEEECCCCCCCchhhhhcccCCHhhCCCCCccHHHHHHHHHH
Confidence 011233 467888999999999998875110 001 0111111121
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCCcCCcccceecccC----
Q 012333 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVPVHDRITSLVYCMR---- 427 (466)
Q Consensus 353 ~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~~~~~~~~~~~~~~---- 427 (466)
+ ......+|++++++++|.+||+++|+++++|+|++|++|||||+|.+ ++.. +.++..+...+...
T Consensus 352 ~--------~~~~~~~~~~~~~~~~t~~~a~~~g~~~~~G~l~~G~~Ad~~~~d~~~~~~~-~~~~~~~~~~~sp~~g~~ 422 (461)
T 3sfw_A 352 E--------GVRKGKISLNQFVDITSTKVAKLFGMFPQKGTIAVGSDADIVLFDPTVQRTI-SVETHHMNVDYNPFEGMQ 422 (461)
T ss_dssp H--------TTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCSTTSBCCEEEEEEEEEEEC-CTTTCCSSSSCCTTTTCE
T ss_pred H--------HHHcCCCCHHHHHHHHhHHHHHHcCCCCCCCccCCCCcCCEEEEcCCCCEEE-chHHcccccCCCCCCCCE
Confidence 1 11233599999999999999999999878999999999999999988 2221 22221111111111
Q ss_pred -CCCeeEEEEccEEEEECCeeeecc-HHHHH
Q 012333 428 -TENVVSVMCNGQWVMKNKKILLLM-RGRLF 456 (466)
Q Consensus 428 -~~~v~~v~v~G~~v~~~g~~~~~~-~~~~~ 456 (466)
..+|..||++|++||++|++++.. .|+++
T Consensus 423 ~~~~v~~t~v~G~~v~~~g~~~~~~~~G~~~ 453 (461)
T 3sfw_A 423 VHGDVISVLSRGAFVVRNKQFVGHAGAGRYV 453 (461)
T ss_dssp EEEEEEEEEETTEEEEETTEECCCTTCCCBC
T ss_pred ecceEEEEEECCEEEEECCeeccCCCCceEe
Confidence 148999999999999999988654 36554
No 32
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=100.00 E-value=7.4e-37 Score=302.16 Aligned_cols=380 Identities=15% Similarity=0.186 Sum_probs=226.1
Q ss_pred eEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccC
Q 012333 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (466)
Q Consensus 20 ~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~ 99 (466)
+++|+|++|+++++ ..+++|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|+.....
T Consensus 1 ~~li~n~~vv~~~~----~~~~~v~I~~g~I~~ig~~~~~----~-~~~~viD~~G~~v~PGlID~H~H~~~~~~----- 66 (458)
T 1gkp_A 1 PLLIKNGEIITADS----RYKADIYAEGETITRIGQNLEA----P-PGTEVIDATGKYVFPGFIDPHVHIYLPFM----- 66 (458)
T ss_dssp CEEEESCEEEETTE----EEECEEEESSSBCCEEESCCCC----C-TTCEEEECTTSEEEECEEEEEECSSCEET-----
T ss_pred CEEEEeeEEECCCC----ceEeeEEEECCEEEEecCCCCC----C-CCCeEEECCCCEEecCEEecccCCCcCCC-----
Confidence 37899999997542 2567999999999999975321 1 25689999999999999999999954210
Q ss_pred CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc----CHHHHHHHHHH-hCCeEEeecccccCC
Q 012333 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVEL-LGLRACLVQSTMDCG 174 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~----~~~~~~~~~~~-~g~~~~~~~~~~~~~ 174 (466)
.....++.+. ..+.++++||||+++++.. ......+.... ...+...........
T Consensus 67 ----------------~~~~~~~~~~----~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (458)
T 1gkp_A 67 ----------------ATFAKDTHET----GSKAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAV 126 (458)
T ss_dssp ----------------TEECSCCHHH----HHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEEC
T ss_pred ----------------CCcCHhHHHH----HHHHHHhCCccEEEeCCCCCCCCCHHHHHHHHHHHhccCceeeEEEEEee
Confidence 0011112111 2244678999999996532 22222222222 111111110010000
Q ss_pred CCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHH
Q 012333 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (466)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (466)
+ . ...+.+.+..+.+ +.+...++..+.++.....+++.+.++++.+++++.++++|+. .........
T Consensus 127 ---~-~----~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~e-~~~~~~~~~ 193 (458)
T 1gkp_A 127 ---S-K----FDEKTEGQLREIV----ADGISSFKIFLSYKNFFGVDDGEMYQTLRLAKELGVIVTAHCE-NAELVGRLQ 193 (458)
T ss_dssp ---C-C----CCTTHHHHHHHHH----HTTCCEEEEEECSTTTTBCCHHHHHHHHHHHHHHTCEEEEEES-CHHHHHHHH
T ss_pred ---c-C----CchhhHHHHHHHH----HhCCCEEEEEeccCCCcCCCHHHHHHHHHHHHhcCCEEEEEcC-CHHHHHHHH
Confidence 0 0 1111233333333 2244556666666666778899999999999999999999994 333322211
Q ss_pred -hh--cCCC--------CchH-------HHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCeE--EECcc------ch
Q 012333 255 -DT--RKVD--------HGTV-------TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKV--SHCPA------SA 307 (466)
Q Consensus 255 -~~--~~~~--------~~~~-------~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~~--~~~p~------~~ 307 (466)
.. .+.. .... ..+...+.++.+..+.|...- +.+.++.+++.|+.+ .+||. ++
T Consensus 194 ~~~~~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~ 273 (458)
T 1gkp_A 194 QKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGATGYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLLDKTY 273 (458)
T ss_dssp HHHHHTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHHTCEEEECSCCSHHHHHHHHHHHHTTCCEEEEEEHHHHHCCGGG
T ss_pred HHHHhcCCCChhhccCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHcCCeEEEEecccceeeCHHH
Confidence 11 1110 0000 122222334444444443321 124577888899865 57876 33
Q ss_pred hhc--------cCCcc---------HHHHHHcCCcEEEccCCCCCCCC------CCHHH--------HHHHHHHHhcccc
Q 012333 308 MRM--------LGFAP---------IKEMLHADICVSLGTDGAPSNNR------MSIVD--------EMYLASLINKGRE 356 (466)
Q Consensus 308 ~~~--------~~~~~---------~~~~~~~gi~~~~gsD~~~~~~~------~~~~~--------~~~~~~~~~~~~~ 356 (466)
+.. ...+| ++.++++|+.+++|||+.+.+.. .+++. ++....++.+..
T Consensus 274 ~~~~~~~g~~~~~~~p~r~~~~~~~l~~~~~~G~~~~~gtD~~~~~~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~~- 352 (458)
T 1gkp_A 274 AERGGVEAMKYIMSPPLRDKRNQKVLWDALAQGFIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGV- 352 (458)
T ss_dssp GGSCHHHHHTTCCSSCCCCTHHHHHHHHHHHTTSSCEEECCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHT-
T ss_pred hcccccCCcceEEeCCCCCHHHHHHHHHHHhcCCeeEEECCCCCCCHHHhhcccCChhhCCCCcccHHHHHHHHHHHHH-
Confidence 321 01133 34689999999999999775321 01111 222222222110
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcC--------CcccceecccCC
Q 012333 357 VFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH--------DRITSLVYCMRT 428 (466)
Q Consensus 357 ~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~--------~~~~~~~~~~~~ 428 (466)
....+|++++++++|.|||++||+++++|+|++|++|||||||.+.....+.. +|+..+. ..
T Consensus 353 -------~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~p~~g~~---~~ 422 (458)
T 1gkp_A 353 -------SRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAVGSDADLVVYDPQYRGTISVKTQHVNNDYNGFEGFE---ID 422 (458)
T ss_dssp -------TSSSCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEETTCCEECCGGGCCSSSSCCTTTTCE---ES
T ss_pred -------HcCCCCHHHHHHHHhhCHHHHhCCCCCCCcCCCCCcCCEEEEeCCCCeEEchHHcccccCCCccCCCE---Ee
Confidence 11249999999999999999999977799999999999999999853222211 2222211 13
Q ss_pred CCeeEEEEccEEEEECCeeeeccH-HHHHH
Q 012333 429 ENVVSVMCNGQWVMKNKKILLLMR-GRLFQ 457 (466)
Q Consensus 429 ~~v~~v~v~G~~v~~~g~~~~~~~-~~~~~ 457 (466)
.+|..||++|++||++|++++... |++++
T Consensus 423 ~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~ 452 (458)
T 1gkp_A 423 GRPSVVTVRGKVAVRDGQFVGEKGWGKLLR 452 (458)
T ss_dssp CEEEEEEETTEEEEETTEECCCTTCCCBCC
T ss_pred eEEEEEEECCEEEEECCeeccCCCCceecc
Confidence 579999999999999999987654 76653
No 33
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.3e-36 Score=296.45 Aligned_cols=367 Identities=17% Similarity=0.168 Sum_probs=217.4
Q ss_pred cccceEEEEccEEEeecCCcceeeceEEEEE-CCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccc
Q 012333 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~-~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~ 94 (466)
.++++++|+|++|+++++ .....+++|+|+ ||+|++|++..+. + .+.++||++|++|+|||||+|+|+.....
T Consensus 12 ~~~~~~li~n~~vv~~~~-~~~~~~~~v~I~~~g~I~~Ig~~~~~----~-~~~~viD~~g~~v~PGlID~H~H~~~~~~ 85 (417)
T 2ogj_A 12 PLQAPILLTNVKPVGFGK-GASQSSTDILIGGDGKIAAVGSALQA----P-ADTQRIDAKGAFISPGWVDLHVHIWHGGT 85 (417)
T ss_dssp --CCCEEEEEEEECSSCT-TCCCSCEEEEECTTSBEEEEETTCCC----S-SCEEECCC--CEEEECEEEEEECCCBTTB
T ss_pred cCCCcEEEECCEEEcCCC-CccCccceEEEecCCEEEEeccCCCC----C-CCCeEEECCCCEEccCeeecccccccccc
Confidence 344689999999997543 113467899999 9999999874321 1 24579999999999999999999954321
Q ss_pred ccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc---CHHHHHHHHHH-h--CCeEEeec
Q 012333 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVEL-L--GLRACLVQ 168 (466)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~---~~~~~~~~~~~-~--g~~~~~~~ 168 (466)
.. ..+.. ..++++||||+++++.. ....+.+...+ . +++.+...
T Consensus 86 ~~--------------------~~~~~----------~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 135 (417)
T 2ogj_A 86 DI--------------------SIRPS----------ECGAERGVTTLVDAGSAGEANFHGFREYIIEPSRERIKAFLNL 135 (417)
T ss_dssp SS--------------------CCCGG----------GTSGGGTEEEEEEESSCCSTTHHHHHHHTTTTCSSEEEEEEES
T ss_pred cc--------------------CCCHH----------HHHHhCCcCeEEeCCcCCCcCHHHHHHHHhhccccCeEEEecc
Confidence 10 00111 13689999999997633 22222221111 1 12333222
Q ss_pred ccccCCCCCCc-----ccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceec
Q 012333 169 STMDCGEGLPA-----SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 243 (466)
Q Consensus 169 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 243 (466)
.. . |... .... ......+...+.++++.. ....++.+.........+.+.+.++++++++.+.++.+|+
T Consensus 136 ~~--~--G~~~~~~~~e~~~-~~~~~~~~~~~~~~~~~~-~~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 209 (417)
T 2ogj_A 136 GS--I--GLVACNRVPELRD-IKDIDLDRILECYAENSE-HIVGLKVRASHVITGSWGVTPVKLGKKIAKILKVPMMVHV 209 (417)
T ss_dssp ST--T--TTTTTTTSCSCSS-GGGCCHHHHHHHHHTCTT-TEEEEEEEESHHHHTTCTTHHHHHHHHHHHHHTCCEEEEE
T ss_pred cc--C--cCCCCCCcccccc-hhhcCHHHHHHHHHhCCC-ceEEEEEEecCCccccccHHHHHHHHHHHHHcCCcEEEEc
Confidence 11 1 1111 1100 000011223333333221 1112444444333445677888899999999999999999
Q ss_pred cCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh-----------hhHHHHHhcCCeEEECccchhhccC
Q 012333 244 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLG 312 (466)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-----------~~~~~~~~~g~~~~~~p~~~~~~~~ 312 (466)
.+....... .... +.....+.|+.+..+ +++.++++.|+.+.++|.... ..
T Consensus 210 ~~~~~~~~~-------------~~~~---l~~g~~~~H~~~~~~~~~~~~~~~~~~~i~~~~~~g~~v~~~~~~~~--~~ 271 (417)
T 2ogj_A 210 GEPPALYDE-------------VLEI---LGPGDVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRLDIGHGGAS--FS 271 (417)
T ss_dssp CSSSSCHHH-------------HHHH---CCTTCEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEEECCBCSSS--CC
T ss_pred CCCcccHHH-------------HHHH---hcCCCEEEeccCCCccchhccCHHHHHHHHHHHhcCcEEEecCCCcc--cc
Confidence 754321111 1111 122356777665332 567777888988877775321 23
Q ss_pred CccHHHHHHcC-CcEEEccCCCCCC-C---CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 012333 313 FAPIKEMLHAD-ICVSLGTDGAPSN-N---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (466)
Q Consensus 313 ~~~~~~~~~~g-i~~~~gsD~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (466)
..+++.+++.| ++++++||++ .+ . ...+...+... .. .++|++++++++|.|||+++|+
T Consensus 272 ~~~~~~~~~~G~~~~~lgtD~~-~~~~~g~~~~l~~~~~~~--~~-------------~~l~~~~al~~~T~n~A~~lgl 335 (417)
T 2ogj_A 272 FKVAEAAIARGLLPFSISTDLH-GHSMNFPVWDLATTMSKL--LS-------------VDMPFENVVEAVTRNPASVIRL 335 (417)
T ss_dssp HHHHHHHHHTTCCCSBCCBCBS-TTTTTTTCCCHHHHHHHH--HH-------------TTCCHHHHHHTTTHHHHHHTTC
T ss_pred chHHHHHHHcCCCceEEEcCCC-CCccCCChhHHHHHHHHH--HH-------------cCCCHHHHHHHHHHHHHHHhCC
Confidence 46789999999 9999999986 43 1 11222222211 11 1499999999999999999999
Q ss_pred CCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHHHHHH
Q 012333 388 DNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 462 (466)
Q Consensus 388 ~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 462 (466)
++ +|+|++|++|||||+|.+... .+..++....++.....+|..||++|++||+++++...+ +++++..+.
T Consensus 336 ~~-~G~l~~G~~ADlvv~d~~~~~-~~~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~~~~~~--~~~~~~~~~ 406 (417)
T 2ogj_A 336 DM-ENRLDVGQRADFTVFDLVDAD-LEATDSNGDVSRLKRLFEPRYAVIGAEAIAASRYIPRAR--KLVRHSHGY 406 (417)
T ss_dssp CC-SSTTSTTSBCEEEEEEEEEEE-EEEECTTSCEEEEEEEEEEEEEEETTEEEECCCCCCCC------------
T ss_pred CC-CCccCCCCcccEEEEecccCC-ceecCCCCceEecccccceEEEEECCEEEEeCCccchHH--HHHHHhhcc
Confidence 76 899999999999999987221 122333333333333458999999999999999998766 666665543
No 34
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=100.00 E-value=1.9e-35 Score=292.83 Aligned_cols=345 Identities=16% Similarity=0.176 Sum_probs=225.1
Q ss_pred eEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc---
Q 012333 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG--- 96 (466)
Q Consensus 20 ~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~--- 96 (466)
+++|+|++|+|+++... ...+|+|+||||++||+..+.......+++++||++|++|+|||||+|+|+.......
T Consensus 37 ~~li~ng~I~t~~~~~~--~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~ 114 (534)
T 3icj_A 37 MKALINGTIYTSFSPVK--KVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMV 114 (534)
T ss_dssp EEEEESSEEEEEETTEE--EESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSE
T ss_pred CEEEECCEEECCCCCCc--eeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCcc
Confidence 47999999999876432 3459999999999999865542211013678999999999999999999975422110
Q ss_pred -ccCCCCchH-----------hhhhccccccC------------------------------------------------
Q 012333 97 -IADDVDLMT-----------WLHDRIWPYES------------------------------------------------ 116 (466)
Q Consensus 97 -~~~~~~~~~-----------~~~~~~~~~~~------------------------------------------------ 116 (466)
.....+..+ |+.+..|....
T Consensus 115 dl~~~~s~~e~~~~l~~~~~~wi~g~G~~~~~~~~~pt~~~LD~~~~Pv~l~~~~~H~~~~Ns~AL~~~gi~~t~~p~G~ 194 (534)
T 3icj_A 115 DLRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNLKPSKDFDES 194 (534)
T ss_dssp ECTTCCSHHHHHHHHHTCCSSSEEEEEECHHHHSSCCCHHHHTTSSSCEEEEETTSSEEEECHHHHHHHCCCCCTTEETT
T ss_pred CCCCCCCHHHHHHHHHHHHhhCEEEcccCHHHhcCCCCHHHHhhCCCeEEEEecCCcHhHHhHHHHHHcCCCCCCCCCCC
Confidence 000001000 33333332110
Q ss_pred -----------------C-C-ChhHHHHHHHHHHHHHHhcCceeeeecCccC-HHHHHHHHHH---hCCeEEeecccccC
Q 012333 117 -----------------N-M-TEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAKAVEL---LGLRACLVQSTMDC 173 (466)
Q Consensus 117 -----------------~-~-~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-~~~~~~~~~~---~g~~~~~~~~~~~~ 173 (466)
. . +.++.........+.+.+.|+|++.+++... .....+.... ..+|.......
T Consensus 195 tG~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~~~~~~~~~~~l~~~g~l~~rv~~~~~~--- 271 (534)
T 3icj_A 195 TGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVGEKALKALFELEREGRLKMNVFAYLSP--- 271 (534)
T ss_dssp TTEEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEECHHHHHHHHHHHHTTCCCSEEEEEECG---
T ss_pred CceeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHHHhCCCCcEEEEEecCH---
Confidence 0 1 2222233334466778999999999986331 1112222222 23444321100
Q ss_pred CCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeE-----EEEe-------------------ecccccCCHHHHHHHH
Q 012333 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR-----IWFG-------------------IRQIMNATDRLLLETR 229 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~-------------------~~~~~~~~~~~l~~~~ 229 (466)
...+...+.. ....+...++ ++.. ..+....+++++.+++
T Consensus 272 --------------~~~~~~~~~~--~~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~~~~e~l~~~v 335 (534)
T 3icj_A 272 --------------ELLDKLEELN--LGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVI 335 (534)
T ss_dssp --------------GGHHHHHHHT--CCSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCSSCHHHHHHHH
T ss_pred --------------HHHHHHHHhc--cccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCcccCCHHHHHHHH
Confidence 0111111110 0011122222 2110 1123346899999999
Q ss_pred HHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchh-
Q 012333 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAM- 308 (466)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~- 308 (466)
+.|++.|+++++|+.+...... .++.+.... .+..++|+.++++++++++++.|+.+++||.+..
T Consensus 336 ~~A~~~G~~v~~Ha~gd~ai~~-----------~l~a~~~~~---~r~~ieH~~~~~~e~i~~la~~gv~~~~~P~~~~~ 401 (534)
T 3icj_A 336 ERAKPLGLDVAVHAIGDKAVDV-----------ALDAFEEAE---FSGRIEHASLVRDDQLERIKELKVRISAQPHFIVS 401 (534)
T ss_dssp HHHTTTTCEEEEEECSHHHHHH-----------HHHHHHHHT---CCCEEEECCBCCHHHHHHHHHHTCEEEECTTHHHH
T ss_pred HHHHHCCCEEEEEEcChHHHHH-----------HHHHHHhcc---CCCEEEECCCCCHHHHHHHHHcCCeEEEccccccc
Confidence 9999999999999975332211 122222222 6788999999999999999999999999998753
Q ss_pred -----------hccCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 012333 309 -----------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377 (466)
Q Consensus 309 -----------~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~ 377 (466)
+..+.+|++.+++. +++++|||++.. ..+++..++.+... ..+..++++|++++|+++
T Consensus 402 ~~~~~~~lg~~r~~~~~p~~~l~~~-v~valGSD~p~~--~~~p~~~~~~av~r--------~~~~~~~~ls~~eaL~~~ 470 (534)
T 3icj_A 402 DWWIVNRVGEERAKWAYRLKTLSSI-TKLGFSTDSPIE--PADPWVSIDAAVNR--------YVVDPGERVSREEALHLY 470 (534)
T ss_dssp CTTHHHHHHHHHGGGBTCHHHHHHH-SCEEECCTTTTS--CCCHHHHHHHHHHC--------CSSCGGGCCCHHHHHHHT
T ss_pred hhHHHHhhCHHHHhccHHHHHHHHh-CCEEeecCCCCC--CCCHHHHHHHHHhc--------cccCcccCCCHHHHHHHH
Confidence 22467899999999 999999999754 36899998877543 112344679999999999
Q ss_pred hHHHHHHcCCCCcccccccCCccCEEEEcCCCCC
Q 012333 378 TINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 411 (466)
Q Consensus 378 T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~ 411 (466)
|.++|+++|++ ++|+|++||.|||||+|.|+++
T Consensus 471 T~~~A~~lg~e-~~GsLe~Gk~ADlvvld~dpl~ 503 (534)
T 3icj_A 471 THGSAQVTLAE-DLGKLERGFRAEYIILDRDPLK 503 (534)
T ss_dssp THHHHHHTTCT-TCSCCSTTSBCCEEEESSCTTC
T ss_pred HHHHHHHhCCC-CCeEECCCCCcCEEEECCChhh
Confidence 99999999998 8999999999999999999443
No 35
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=100.00 E-value=1.4e-35 Score=286.36 Aligned_cols=354 Identities=16% Similarity=0.119 Sum_probs=221.8
Q ss_pred cceEEEEccEE-EeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCC-CeEEeCCCcEEeecccccccCCcccccc
Q 012333 18 SSTMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMA-DQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (466)
Q Consensus 18 ~~~~lI~n~~i-~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~-~~~iD~~G~~v~PG~ID~H~H~~~~~~~ 95 (466)
|.+++|+|++| +++++...++.+++|+|+||+|++|++..... + .+ .++||++|++|+|||||+|+|+...
T Consensus 1 m~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~---~-~~~~~viD~~g~~v~PGlID~H~H~~~~--- 73 (386)
T 2vun_A 1 MSKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMK---D-AGDATIIDAAGSTVTPGLLDTHVHVSGG--- 73 (386)
T ss_dssp -CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGT---T-CTTCEEEECTTCEEEECEEEEEECCCST---
T ss_pred CccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccC---C-CCCceEEcCCCCEEccceeeccccccCC---
Confidence 46899999999 97654323467889999999999998742211 1 24 6899999999999999999999420
Q ss_pred cccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecC-----ccC--HHHHH--HHHHH---hCCe
Q 012333 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-----GQH--VSEMA--KAVEL---LGLR 163 (466)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~-----~~~--~~~~~--~~~~~---~g~~ 163 (466)
+|. + +.........++++||||+++++ +.. ...+. +.... .+.+
T Consensus 74 ---------~~~------------~---~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (386)
T 2vun_A 74 ---------DYA------------P---RQKTMDFISSALHGGVTTMISAGSPHFPGRPKDAAGTKALAITLSKSYYNAR 129 (386)
T ss_dssp ---------TEE------------G---GGTEESHHHHHHTTTEEEEEECCCTTSTTCCCSHHHHHHHHHHHHHHHHHCC
T ss_pred ---------CcC------------h---hHHHHHHHHHHHhCCceEEEeccccccCCChhhHHHHHHHHHHhhccccccc
Confidence 111 0 00001134668999999999965 211 21121 21111 1111
Q ss_pred EEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceec
Q 012333 164 ACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 243 (466)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 243 (466)
. ....+. . +.+ .... ... .. .++++.+.+...++.+.. . ...+++.+.++++.++++|+++.+|+
T Consensus 130 ~-~~~~~~-~--g~~-~~~~-~~~--~~----~~~~~~~~g~~~ik~~~~-~--~~~~~~~l~~~~~~a~~~g~~v~~H~ 194 (386)
T 2vun_A 130 P-AGVKVH-G--GAV-ILEK-GLT--EE----DFIEMKKEGVWIVGEVGL-G--TIKNPEDAAPMVEWAHKHGFKVQMHT 194 (386)
T ss_dssp G-GGCEEE-C--CEE-CCCT-TCC--HH----HHHHHHHTTCCEEEEETS-S--SCCSHHHHHHHHHHHHHTTCEEEEEC
T ss_pred c-cceeec-c--Ccc-cccC-CcC--HH----HHHHHHHhCCCeEEEeec-C--CCCCHHHHHHHHHHHHHCCCeEEEec
Confidence 0 000000 0 100 0000 001 12 222222334455555321 1 12578899999999999999999999
Q ss_pred cCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeec----CChhhHHHHHhcCCeEEECccchhhccCCccHHHH
Q 012333 244 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW----VNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEM 319 (466)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~----~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~ 319 (466)
.+...... ...........+ .+ .+.|+.+ ++++.++++++.|+.+..++..........+++.+
T Consensus 195 ~~~~~~~~--------~~~~i~~~~~~G---~~-~i~H~~~~~~~~~~~~~~~~~~~g~~vl~~~~~g~~~~~~~~~~~~ 262 (386)
T 2vun_A 195 GGTSIPGS--------STVTADDVIKTK---PD-VVSHINGGPTAISVQEVDRIMDETDFAMEIVQCGNPKIADYVARRA 262 (386)
T ss_dssp SCCSCSTT--------CSCCHHHHHHHC---CS-EEETTTCSSSCCCHHHHHHHHHHCCCEEEEESSSCHHHHHHHHHHH
T ss_pred CCcccccc--------CHHHHHHHHHcC---CC-EEEEccCCCCCCCHHHHHHHHHcCCeEEEeccCCcccccHHHHHHH
Confidence 74321000 001111111222 22 4889888 88999999999998873332211012334678899
Q ss_pred HHcCC--cEEEccCCC-CC--CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCccccc
Q 012333 320 LHADI--CVSLGTDGA-PS--NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 394 (466)
Q Consensus 320 ~~~gi--~~~~gsD~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i 394 (466)
++.|+ +++++||++ +. ++...+..+++.. .. .++|++++++++|.|||+++|+ ++|+|
T Consensus 263 ~~~g~~d~v~lgTD~p~~~~~~~~g~~~~~~~~~--~~-------------~~ls~~~~~~~~T~n~A~~lgl--~~G~i 325 (386)
T 2vun_A 263 AEKGQLGRVIFGNDAPSGTGLIPLGILRNMCQIA--SM-------------SDIDPEVAVCMATGNSTAVYGL--NTGVI 325 (386)
T ss_dssp HHHTCGGGEEEECCBSBTTBBCTTHHHHHHHHHH--HH-------------SCCCHHHHHHHHTHHHHHHHTC--SCSSC
T ss_pred HHcCCCceeEEecCCCCCCCCCcchhHHHHHHHH--hh-------------cCCCHHHHHHHHhHHHHHHcCC--Cceee
Confidence 99999 999999994 21 1111233333322 11 2499999999999999999999 48999
Q ss_pred ccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeee
Q 012333 395 EAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 449 (466)
Q Consensus 395 ~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 449 (466)
++|++|||||+|.+.. .|..+++..+.+ ....+|..||++|++|+++|+...
T Consensus 326 ~~G~~ADlvv~d~~~~--~~~~~~~~~~~~-~~~~~v~~v~v~G~~v~~~~~~~~ 377 (386)
T 2vun_A 326 APGKEADLIIMDTPLG--SVAEDAMGAIAA-GDIPGISVVLIDGEAVVTKSRNTP 377 (386)
T ss_dssp STTSBCCEEEEECBTT--CSCSSHHHHHHH-TCCCEEEEEEETTEEEESSCSSSC
T ss_pred CCCCeeCEEEECCCcc--cccchhHHHhhc-cCCCceeEEEECCEEEeecCcCCC
Confidence 9999999999999864 355566666554 345689999999999999998765
No 36
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.7e-36 Score=296.62 Aligned_cols=369 Identities=17% Similarity=0.194 Sum_probs=217.4
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcC-CchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ-SADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~-~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
|++++|+|++|++++ . +.+++|+|+||+|++|++ ..... .+..+.++||++|++|+|||||+|+|+....
T Consensus 3 ~m~~li~~~~v~~~~---~-~~~~~v~i~~g~I~~i~~~~~~~~--~~~~~~~viD~~g~~v~PGlID~H~H~~~~~--- 73 (452)
T 2gwn_A 3 AMKILLRNALITNEG---K-TFPGSVMIDGAFISRIIEGELPAD--DNLSADEVIECSGLRLFPGCIDDQVHFREPG--- 73 (452)
T ss_dssp CSEEEEEEEEEEETT---E-EEEEEEEEETTEEEEEEESCCCTT--CCTTCSEEEECTTCEEEECEEEEEECCCTTT---
T ss_pred cccEEEECeEEECCC---c-eeeeeEEEECCEEEEEecCCCccc--cCCCCCeEEeCCCCEEecCEEeeccccCCCC---
Confidence 568999999999743 2 467899999999999986 43210 0013568999999999999999999995310
Q ss_pred ccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC-----HHHH---HHHHHHhC-CeEEee
Q 012333 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEM---AKAVELLG-LRACLV 167 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-----~~~~---~~~~~~~g-~~~~~~ 167 (466)
....++.+ ...+.++++||||+++++... ...+ .+.....+ +.....
T Consensus 74 --------------------~~~~e~~~----~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (452)
T 2gwn_A 74 --------------------LTHKATIA----SESRAAVAGGVTSFMDMPNTNPPTTMWERLLEKRQIGADTAWANYGFF 129 (452)
T ss_dssp --------------------CTTTCCHH----HHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEEC
T ss_pred --------------------CCcHHHHH----HHHHHHHhCCeEEEEcCCCCCCCCChHHHHHHHHHHhhccCcccEEEE
Confidence 01111111 122456799999999986321 1111 11111111 111000
Q ss_pred cc-----------cccCC-CCC------Cc-ccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeec-------------
Q 012333 168 QS-----------TMDCG-EGL------PA-SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIR------------- 215 (466)
Q Consensus 168 ~~-----------~~~~~-~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------- 215 (466)
.. ....+ .|+ .. .+.. ... ....+.+++. ...+.......
T Consensus 130 ~~~~~~~~~~i~~~~~~g~~g~k~~~~~~~~~~~~-~~~---~~~~~~~~~~----~~~~~~h~~~~~~~~~~~~~~~~~ 201 (452)
T 2gwn_A 130 FGGTNDNIDEIKRVDKHLVPGLKLFLGSSTGNMLV-DNK---ETLEKIFGEC----DLLIATHCEKEEIIRANKEHYKAK 201 (452)
T ss_dssp EECCSSCHHHHHTCCTTSCSCEEEESSSCCGGGBC-CCH---HHHHHHHHHC----CSCEEEECCCHHHHHHHHHHHHHH
T ss_pred EeecCCCHHHHHHHHHcCCCEEEEEeccCCCCccc-CCH---HHHHHHHHHc----CCEEEEcCCCHHHHHhHHhhhhhh
Confidence 00 00000 010 00 0000 111 1222333332 11221111000
Q ss_pred -------------ccccCCHHHHHHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCe---e
Q 012333 216 -------------QIMNATDRLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL---L 278 (466)
Q Consensus 216 -------------~~~~~~~~~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 278 (466)
.+.....+.+.+++++++++++++++ |+.. ........... .++. ... +
T Consensus 202 ~G~~~~~~~h~~~~~~~~~~~~l~~~~~la~~~g~~v~i~H~~~-~~~~~~~~~~~-----------a~~~--~~v~~~~ 267 (452)
T 2gwn_A 202 YGNDLDIHFHPLIRSEEACYRSSAEAVELAERMNARLHILHLST-EKELSLFRNDI-----------PTAQ--KRITSEV 267 (452)
T ss_dssp HCSCCCGGGHHHHSCHHHHHHHHHHHHHHHHHHTCCEEECCCCC-TGGGGGSCCSS-----------CGGG--CSEEEEE
T ss_pred cCcccchhhccccCChHHHHHHHHHHHHHHHHhCCCEEEEeCCC-HHHHHHHHHhh-----------cccC--CCeEEEE
Confidence 01122356788899999999999999 8873 22111110000 0010 012 3
Q ss_pred EEEeecCChhhHHHHHhcCCeEEECccchhhc-cCCccHHHHHHcCCcEEEccCCCCCCCC---CCHHH--------HHH
Q 012333 279 SAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR---MSIVD--------EMY 346 (466)
Q Consensus 279 ~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~~~---~~~~~--------~~~ 346 (466)
..|+.++++++++. .|..+.++|. ++. .+..++++++++|+++++|||+.+.+.. .+++. +++
T Consensus 268 ~~h~~~l~~~~~~~---~g~~~~~~P~--lr~~~~~~~l~~~l~~Gv~~~lgTD~~~~~~~~k~~~~~~~~~g~~~~e~~ 342 (452)
T 2gwn_A 268 CVHHLWFSDTDYGR---LGNRIKWNPA--IKKESDREALRAAVRNGRIDIIATDHAPHLLREKEGSCLQAASGGPLVQHS 342 (452)
T ss_dssp EHHHHHCCGGGHHH---HGGGGCCSSC--CCCHHHHHHHHHHHHHSSSCEEECCBCCCCHHHHCSCTTTSCCCCCCTTTH
T ss_pred chHHhhcCHHHHhc---cCceEEECCC--CCCHHHHHHHHHHHHCCCceEEEeCCCCCChHHhcCChhhCCCCCccHHHH
Confidence 34899999988876 6777788887 333 3456889999999999999999765421 22332 222
Q ss_pred HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceeccc
Q 012333 347 LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCM 426 (466)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~ 426 (466)
......... ..++|++++++++|.|||+++|++ ++|+|++|++|||||+|.+.....+.++..+...+..
T Consensus 343 ~~~~~~~~~---------~~~ls~~~~l~~~T~~~A~~lgl~-~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~ 412 (452)
T 2gwn_A 343 LLALLELCN---------QGIFSIEEIVSKTAHIPATLFAIE-KRGYIRPGYYADLVLVDPSSPHTVSADNILSLCGWSP 412 (452)
T ss_dssp HHHHHHHHH---------TTSSCHHHHHHHHTHHHHHHHTBT-TCSSCCTTSBCCEEEEETTSCEECCTTTCCSTTCCCT
T ss_pred HHHHHHHHH---------cCCCCHHHHHHHHhHhHHHHcCCC-CCCcccCCCcCCEEEEcCCCCeEECHHHccccCCCCC
Confidence 222121100 125999999999999999999996 6899999999999999998433333334333333322
Q ss_pred C-----CCCeeEEEEccEEEEECCeeeec-cHHHHH
Q 012333 427 R-----TENVVSVMCNGQWVMKNKKILLL-MRGRLF 456 (466)
Q Consensus 427 ~-----~~~v~~v~v~G~~v~~~g~~~~~-~~~~~~ 456 (466)
. ..+|..||++|++||++|+++.. ..|+++
T Consensus 413 ~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~ 448 (452)
T 2gwn_A 413 FEGFTFSHSVAYTFVNGCLAYAKGRLAESRPTVHPL 448 (452)
T ss_dssp TTTCEESCEEEEEEETTEEEEETTEECSSCCCCCBC
T ss_pred CCCcEEeeeEEEEEECCEEEEECCeeccCCCCceee
Confidence 2 46899999999999999998754 445544
No 37
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=2.7e-36 Score=297.94 Aligned_cols=379 Identities=15% Similarity=0.152 Sum_probs=210.7
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
+|++|+|++|+++++ ..+++|+|+||+|++|++... .+.++||++|++|+|||||+|+|+.......
T Consensus 1 ~~~li~n~~v~~~~~----~~~~~v~I~~g~I~~ig~~~~-------~~~~viD~~G~~v~PGlID~H~H~~~~~~~~-- 67 (457)
T 1nfg_A 1 MDIIIKNGTIVTADG----ISRADLGIKDGKITQIGGALG-------PAERTIDAAGRYVFPGGIDVHTHVETVSFNT-- 67 (457)
T ss_dssp CCEEEEEEEEEETTE----EEEEEEEEETTEEEEESSCCC-------CCSEEEECTTCEEEECEEEEEECCSCEETTE--
T ss_pred CcEEEEeeEEEeCCC----ceeeeEEEECCEEEEecCCCC-------CCCeEEeCCCCEEccceEeeccccccCcCCC--
Confidence 378999999997542 257799999999999987421 2568999999999999999999995321100
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc----CHHHHHHHHHHh-CCeEEeecccccC
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELL-GLRACLVQSTMDC 173 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~----~~~~~~~~~~~~-g~~~~~~~~~~~~ 173 (466)
+..++.+ ...+.++.+||||+++++.. ......+..... .-...........
T Consensus 68 -------------------~~~e~~~----~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (457)
T 1nfg_A 68 -------------------QSADTFA----TATVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSAIDYGYHII 124 (457)
T ss_dssp -------------------ECSCCHH----HHHHHHHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEE
T ss_pred -------------------CChhhHH----HHHHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHhcccCccCEEEEEe
Confidence 0111211 12345789999999997532 122222222111 1011000011101
Q ss_pred CCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHH
Q 012333 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 253 (466)
... ...+. .+.++++.+.+...++.+.........+.+.+.++++.+++.+.++.+|+..........
T Consensus 125 ~~~--------~~~~~----~~~~~~~~~~G~~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~H~e~~~~~~~~~ 192 (457)
T 1nfg_A 125 VLD--------PTDSV----IEELEVLPDLGITSFKVFMAYRGMNMIDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLR 192 (457)
T ss_dssp CSS--------CCHHH----HHHTTTGGGGTCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHH
T ss_pred ecC--------CchhH----HHHHHHHHHcCCCEEEEeeccCCCCCCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHHHHH
Confidence 100 01111 122333334444445554433221335677888888999999999999985422211111
Q ss_pred Hh--hcCCCCch---------------HHHHhhhccCCCCeeEEEeecCChhhH---HHHHhcCCeEE--ECccch----
Q 012333 254 MD--TRKVDHGT---------------VTFLDKIEFLQNNLLSAHTVWVNHTEI---GLLSRAGVKVS--HCPASA---- 307 (466)
Q Consensus 254 ~~--~~~~~~~~---------------~~~~~~~~~~~~~~~~~H~~~~~~~~~---~~~~~~g~~~~--~~p~~~---- 307 (466)
.. ..+..... .+.+......+.+..+.|.. +.+.+ +.+++.|..+. ++|...
T Consensus 193 ~~~~~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~H~~--~~~~~~~~~~~~~~G~~v~~~~~~h~~~~~~ 270 (457)
T 1nfg_A 193 DKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVNAPIYIVHVT--CEESLEEVMRAKSRGVRALAETCTHYLYLTK 270 (457)
T ss_dssp HHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECCCC--SHHHHHHHHHHHHHTCCEEECEEGGGGTCCG
T ss_pred HHHHhcCCcchhhccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeCC--cHHHHHHHHHHHHcCCeEEEEEchHHhEeCH
Confidence 10 11110000 00111111112222223332 23323 33334554332 222210
Q ss_pred --hh----------------c-cCCccHHHHHHcCCcEEEccCCCCCCCC-------CCHHH--------HHHHHHHHhc
Q 012333 308 --MR----------------M-LGFAPIKEMLHADICVSLGTDGAPSNNR-------MSIVD--------EMYLASLINK 353 (466)
Q Consensus 308 --~~----------------~-~~~~~~~~~~~~gi~~~~gsD~~~~~~~-------~~~~~--------~~~~~~~~~~ 353 (466)
+. . ....+++.+++.|+.+++|||+.+.+.. .+++. +++....+..
T Consensus 271 ~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~G~~~~~gtD~~~~~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~~~~ 350 (457)
T 1nfg_A 271 EDLERPDFEGAKYVFTPPARAKKDHDVLWNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVYQG 350 (457)
T ss_dssp GGGGCTTTGGGGGCCSSCCCCHHHHHHHHHHHHTTCCSCEECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTHHHHHHHH
T ss_pred HHhccccccCceeEEcCCCCCHHHHHHHHHHHhCCCeEEEecCCCCCChHHhhhcccCCHhHCCCCcccHHHHHHHHHHH
Confidence 00 0 1123567789999999999998765422 12221 2222211110
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccC-----C
Q 012333 354 GREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMR-----T 428 (466)
Q Consensus 354 ~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~-----~ 428 (466)
.. ..++|++++++++|.|||++||+++++|+|++|++|||||+|.+.....+..++.+...+... .
T Consensus 351 ~~---------~~~l~~~~~l~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~g~~~~ 421 (457)
T 1nfg_A 351 VN---------EGRISLTQFVELVATRPAKVFGMFPQKGTIAVGSDADIVLWDPEAEMVIEQTAMHNAMDYSSYEGHKVK 421 (457)
T ss_dssp HH---------TTSSCHHHHHHHHTHHHHHHTTCTTTSSSCSTTSBCCEEEEEEEEEEECCGGGSCSSCSCCTTTTCEEE
T ss_pred HH---------cCCCCHHHHHHHHhhhHHHHhCCCCCCcCcCCCCccCEEEEeCCCCEEecHHHccCCCCCCCccCCEec
Confidence 00 124999999999999999999998779999999999999999984322232333222222211 2
Q ss_pred CCeeEEEEccEEEEECCeeeeccH-HHHH
Q 012333 429 ENVVSVMCNGQWVMKNKKILLLMR-GRLF 456 (466)
Q Consensus 429 ~~v~~v~v~G~~v~~~g~~~~~~~-~~~~ 456 (466)
.+|..||++|++||++|+++.... |+++
T Consensus 422 ~~v~~v~v~G~~v~~~g~~~~~~~~G~~~ 450 (457)
T 1nfg_A 422 GVPKTVLLRGKVIVDEGSYVGEPTDGKFL 450 (457)
T ss_dssp EEEEEEEETTEEEEETTEECCCTTSCCBC
T ss_pred ceEEEEEECCEEEEECCccccCCCCCeee
Confidence 479999999999999999987655 6654
No 38
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=100.00 E-value=4.1e-35 Score=282.39 Aligned_cols=342 Identities=16% Similarity=0.127 Sum_probs=211.8
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|++++ . .+.+++|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|+....
T Consensus 2 ~li~~~~v~~~~--~-~~~~~~v~I~~g~I~~vg~~~~~----~-~~~~viD~~g~~v~PGlID~H~H~~~g~------- 66 (382)
T 1yrr_A 2 YALTQGRIFTGH--E-FLDDHAVVIADGLIKSVCPVAEL----P-PEIEQRSLNGAILSPGFIDVQLNGCGGV------- 66 (382)
T ss_dssp EEEESSEEECSS--C-EESSEEEEEETTEEEEEEEGGGS----C-TTCCEEECTTCEEEECEEEEEESEETTE-------
T ss_pred EEEEeeEEEcCC--c-eeeCCEEEEECCEEEEEecCCCC----C-ccceeecCCCCEEccCEEEEeecccCCc-------
Confidence 689999999754 2 66788999999999999875321 1 2557999999999999999999985310
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-CHH-------HHHHHHHHhCCeEEeeccccc
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVS-------EMAKAVELLGLRACLVQSTMD 172 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-~~~-------~~~~~~~~~g~~~~~~~~~~~ 172 (466)
++.+| ....+++..+ .....++++||||+++++.. ... .+.++....|.+.... ..
T Consensus 67 -~~~~~--------~~~~~~~~~~----~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~---~~ 130 (382)
T 1yrr_A 67 -QFNDT--------AEAVSVETLE----IMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGL---HL 130 (382)
T ss_dssp -ESSSS--------TTTSSHHHHH----HHHHHHHHTTEEEEEEEEECCCHHHHHHHHHHHHHHHHHCTTSBCCE---EE
T ss_pred -Ccccc--------ccCCCHHHHH----HHHHHHHhCCeEEEEeecCCCCHHHHHHHHHHHHHHhhccCCceeEE---EE
Confidence 01111 1112332221 24577899999999996532 221 2222323235553211 11
Q ss_pred CCCCCCcccc----cCChHHHHHHHHHHHHHhccCCCCCeEEEE-eecccccCCHHHHHHHHHHHHHcCCccce-eccCC
Q 012333 173 CGEGLPASWA----VRTTDDCIQSQKELYAKHHHAADGRIRIWF-GIRQIMNATDRLLLETRDMAREFKTGIHM-HVAEI 246 (466)
Q Consensus 173 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~l~~~~~~a~~~~~~v~~-H~~~~ 246 (466)
.++...+... ....... ..+.++ +.+.+.+.++.+. .++ +.+.++++.++++|+++++ |+.+.
T Consensus 131 ~g~~~~~~~~g~~~~~~~~~~---~~~~~~-~~~~~~~~ik~~~~~~~-------~~~~~~~~~a~~~g~~v~~gH~~~~ 199 (382)
T 1yrr_A 131 EGPWLNLVKKGTHNPNFVRKP---DAALVD-FLCENADVITKVTLAPE-------MVPAEVISKLANAGIVVSAGHSNAT 199 (382)
T ss_dssp ECSSCCCSCC-CCCSCSCCHH---HHHHHH-HHHHTTTTEEEEEECGG-------GSCHHHHHHHHHTTCEEEECSCCCC
T ss_pred eCCcCCccccCCCCHHHccCC---CHHHHH-HHHhcCCCEEEEEECCC-------CChHHHHHHHHHCCCEEEEECCCCC
Confidence 1111111100 0000111 122233 3233445666532 111 3445778899999999998 99866
Q ss_pred cchhHHHHhhcCCCCchHHHHh-hhc--------cC-----CCCe---eEEEeecCChhhHHHHHhcC-CeEEECccchh
Q 012333 247 PYENQVVMDTRKVDHGTVTFLD-KIE--------FL-----QNNL---LSAHTVWVNHTEIGLLSRAG-VKVSHCPASAM 308 (466)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~-----~~~~---~~~H~~~~~~~~~~~~~~~g-~~~~~~p~~~~ 308 (466)
..+....... +. ...+.+. ... .+ ..+. .+.|+.+++++.++.+++.+ ..+.+++....
T Consensus 200 ~~~~~~~~~~-G~--~~~~h~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 276 (382)
T 1yrr_A 200 LKEAKAGFRA-GI--TFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATA 276 (382)
T ss_dssp HHHHHHHHHH-TC--CEESSTTTTSCCBCSSCCHHHHHHHHCTTCEEEEECSSSSSCHHHHHHHHHHHGGGEEEECCBCT
T ss_pred HHHHHHHHHc-CC--CeeEECCCCCCccccCCcchhhHhhcCCcceeeecCcccccCHHHHHHHHHcCCCcEEEECcChH
Confidence 5443333221 11 0111000 000 00 0112 68899999999999998877 55555554322
Q ss_pred hcc---CCc---cHHHHHHcCCcE-EEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 012333 309 RML---GFA---PIKEMLHADICV-SLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 381 (466)
Q Consensus 309 ~~~---~~~---~~~~~~~~gi~~-~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~ 381 (466)
... ..+ .++.+++.|+++ +.|||.. +..+++.+++.+.... ++|+.++++++|.||
T Consensus 277 ~~g~~~~~~~~~~~~~~~~~Gv~~~~~Gt~~g---~~~~~~~~~~~~~~~~--------------g~~~~~al~~aT~~~ 339 (382)
T 1yrr_A 277 PAGANIEQFIFAGKTIYYRNGLCVDENGTLSG---SSLTMIEGVRNLVEHC--------------GIALDEVLRMATLYP 339 (382)
T ss_dssp TTTSCCSEEEETTEEEEECSSCEECTTCCEEE---BCCCHHHHHHHHHHHH--------------CCCHHHHHHHHTHHH
T ss_pred hcCCCCceEEECCEEEEEECCEEEeCCCcCcC---CccCHHHHHHHHHHHh--------------CCCHHHHHHHHHHHH
Confidence 111 011 145667889887 4566653 2357888888765321 499999999999999
Q ss_pred HHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEEC
Q 012333 382 AKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 444 (466)
Q Consensus 382 A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~ 444 (466)
|+++|+++++|+|++||.|||||+|.+ .+|..||++|++||++
T Consensus 340 A~~lg~~~~~G~i~~G~~ADlvvld~~--------------------~~v~~v~~~G~~v~~~ 382 (382)
T 1yrr_A 340 ARAIGVEKRLGTLAAGKVANLTAFTPD--------------------FKITKTIVNGNEVVTQ 382 (382)
T ss_dssp HHHTTCTTTSSSCCTTSBCCEEEECTT--------------------SCEEEEEETTEEEEEC
T ss_pred HHHhCCCCCCCccCCCCCCCEEEECCC--------------------CCEEEEEECCEEEEeC
Confidence 999999888999999999999999998 4899999999999975
No 39
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=100.00 E-value=6.2e-35 Score=287.33 Aligned_cols=377 Identities=15% Similarity=0.183 Sum_probs=215.3
Q ss_pred cccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccc
Q 012333 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~ 95 (466)
.+++|++|+|++|+++++ ..+++|+|+||+|++|++.... ..++||++|++|+|||||+|+|+.....
T Consensus 20 ~m~~~~~i~~~~v~~~~~----~~~~~v~i~~g~I~~i~~~~~~-------~~~~id~~g~~v~PG~iD~H~H~~~~g~- 87 (473)
T 3e74_A 20 HMSFDLIIKNGTVILENE----ARVVDIAVKGGKIAAIGQDLGD-------AKEVMDASGLVVSPGMVDAHTHISEPGR- 87 (473)
T ss_dssp --CEEEEEESCEEECSSC----EEECEEEEETTEEEEEESCCCC-------EEEEEECTTCEEEECEEEEEECC------
T ss_pred cCcCCEEEEeeEEECCCC----ceeeeEEEECCEEEEEcCCCCC-------CCcEEECCCCEEecCEEEEecccCCCCC-
Confidence 345789999999997543 3577999999999999986431 2579999999999999999999843110
Q ss_pred cccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecC-cc-----CHHHHHHHHHHhCCeEEeecc
Q 012333 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ-----HVSEMAKAVELLGLRACLVQS 169 (466)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~-~~-----~~~~~~~~~~~~g~~~~~~~~ 169 (466)
...+ ........++++|||++++++ .. ....+................
T Consensus 88 -----------------------~~~~---~~~~~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~ 141 (473)
T 3e74_A 88 -----------------------SHWE---GYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAA 141 (473)
T ss_dssp ------------------------------CHHHHHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEE
T ss_pred -----------------------CcHH---HHHHHHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEE
Confidence 0001 112234557999999999987 22 122222222221111111000
Q ss_pred cccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEee-------cccccCCHHHHHHHHHHHHHcCCcccee
Q 012333 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI-------RQIMNATDRLLLETRDMAREFKTGIHMH 242 (466)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~~~~~~a~~~~~~v~~H 242 (466)
... +.... . +.+..+.. +.+...++.++.. +..+..+++.+.++++.+++.|.++.+|
T Consensus 142 ~~~---~~~~~----~----~~~l~~l~----~~G~~~~K~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 206 (473)
T 3e74_A 142 QLG---GLVSY----N----IDRLHELD----EVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVH 206 (473)
T ss_dssp ECE---ECCTT----C----TTTHHHHH----HHTCSCEEEEC------------CCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEe---ecccc----h----HHHHHHHH----HcCCCEEEEeccccCCcccccccCCCCHHHHHHHHHHHHhcCCeEEEE
Confidence 000 01110 0 11112222 2234556655542 3455678899999999999999999999
Q ss_pred ccCCcchhHHHHh------------hcCCCC--c---hHHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCe--EEE
Q 012333 243 VAEIPYENQVVMD------------TRKVDH--G---TVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSH 302 (466)
Q Consensus 243 ~~~~~~~~~~~~~------------~~~~~~--~---~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~--~~~ 302 (466)
+.+.......... ..+... . ....+......+.+..+.|.... +-+.++.+++.|.. ..+
T Consensus 207 ~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~~g~~lhi~Hvst~~~l~li~~ak~~G~~vt~e~ 286 (473)
T 3e74_A 207 CENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDITCES 286 (473)
T ss_dssp CSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECSCCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred ecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEE
Confidence 9764221110000 000000 0 01122222223334444443321 11445666666655 456
Q ss_pred Cccchhh-----------ccCC---------ccHHHHHHcCCcEEEccCCCCCCCCCC---HH--------HHHHHHHHH
Q 012333 303 CPASAMR-----------MLGF---------APIKEMLHADICVSLGTDGAPSNNRMS---IV--------DEMYLASLI 351 (466)
Q Consensus 303 ~p~~~~~-----------~~~~---------~~~~~~~~~gi~~~~gsD~~~~~~~~~---~~--------~~~~~~~~~ 351 (466)
||+.... .... ..+++.++.|++++++||+.|.....+ ++ .+.....+.
T Consensus 287 ~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~~~~i~tDh~p~~~~~k~~~f~~~~~G~~g~e~~l~~~~ 366 (473)
T 3e74_A 287 CPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMF 366 (473)
T ss_dssp CTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHHHHHTTCCCEECCCBCCCCTTTTCSCTTTSCCCBCCGGGHHHHHH
T ss_pred chHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHhCCCCcEEEeCCCCCCHHHcccChhhcCCCcccHHhHHHHHH
Confidence 7753311 0111 245667889999999999987643210 00 011111111
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCC-------cCCccccee
Q 012333 352 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVP-------VHDRITSLV 423 (466)
Q Consensus 352 ~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~-------~~~~~~~~~ 423 (466)
... ....+++++++++++|.|||+++|++ ++|+|++|++|||||+|.+ .|...+ ..+|+....
T Consensus 367 ~~~--------~~~~~~~~~~~~~~~t~~~a~~~g~~-~~G~l~~G~~AD~vv~d~~~~~~~~~~~~~~~~~~sp~~g~~ 437 (473)
T 3e74_A 367 DEA--------VQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRT 437 (473)
T ss_dssp HHH--------TTTTCCCHHHHHHHHTHHHHHHTTCT-TSSCCSTTSBCCEEEEESSCCEECCGGGCCSSSCCCTTTTCE
T ss_pred HHH--------HHcCCCCHHHHHHHHhHHHHHHhCCC-CCCccCCCCccCEEEEeCCCCEEECHHHccccCCCCCCCCCE
Confidence 100 12235999999999999999999996 5799999999999999987 332211 112222211
Q ss_pred cccCCCCeeEEEEccEEEEE-CCeeeeccHHHHHH
Q 012333 424 YCMRTENVVSVMCNGQWVMK-NKKILLLMRGRLFQ 457 (466)
Q Consensus 424 ~~~~~~~v~~v~v~G~~v~~-~g~~~~~~~~~~~~ 457 (466)
-..+|..||++|++||+ +|++++...|+++.
T Consensus 438 ---~~g~v~~t~v~G~~v~~~~g~~~~~~~G~~~~ 469 (473)
T 3e74_A 438 ---IGARITKTILRGDVIYDIEQGFPVAPKGQFIL 469 (473)
T ss_dssp ---ESCEEEEEEETTEEEEETTTBCCSCCCCCEEC
T ss_pred ---EeeEEEEEEECCEEEEecCCeEccCCCceeec
Confidence 13579999999999999 99988766666543
No 40
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=100.00 E-value=4.5e-34 Score=284.45 Aligned_cols=332 Identities=17% Similarity=0.168 Sum_probs=207.8
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhh-------hhhccCCCeEEeCCCcEEeecccccccCC
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL-------QQFSQMADQIIDLQSQILLPGFVNTHVHT 89 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~-------~~~~~~~~~~iD~~G~~v~PG~ID~H~H~ 89 (466)
.++|++|+|++|++.. . +.+++|+|+||+|++|++..... ......++++||++|++|+|||||+|+|+
T Consensus 64 ~~~dllI~n~~Vid~~---g-i~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl 139 (569)
T 1e9y_B 64 EELDLIITNALIVDYT---G-IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHF 139 (569)
T ss_dssp TCCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEET
T ss_pred ccCCEEEEeeEEECCC---C-cEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecC
Confidence 4679999999999732 2 46789999999999999754210 00012356899999999999999999998
Q ss_pred cccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-cC--------------HHHHH
Q 012333 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QH--------------VSEMA 154 (466)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-~~--------------~~~~~ 154 (466)
.. +.. ..+++++||||+++++. +. ...+.
T Consensus 140 ~~----------------------------p~~--------~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~ 183 (569)
T 1e9y_B 140 IS----------------------------PQQ--------IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWML 183 (569)
T ss_dssp TC----------------------------TTH--------HHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHH
T ss_pred CC----------------------------cHH--------HHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHH
Confidence 21 110 35689999999999853 11 12223
Q ss_pred HHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHH
Q 012333 155 KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE 234 (466)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~ 234 (466)
++....+++..+.. .+.. .. .+...+.+ +.+... +..+..+..+++.+.++++.|++
T Consensus 184 ~a~~~~~~~~~~~g------~g~~------~~---~~~l~e~~----~~Ga~g----ik~~~~~~~t~e~l~~~l~~A~~ 240 (569)
T 1e9y_B 184 RAAEEYSMNLGFLA------KGNA------SN---DASLADQI----EAGAIG----FKIHEDWGTTPSAINHALDVADK 240 (569)
T ss_dssp HHHTTSSSEEEEEE------ECCC------SC---HHHHHHHH----HTTCSE----EEECGGGCCCHHHHHHHHHHHHH
T ss_pred HHhcccCceEEEEC------CCCc------CC---HHHHHHHH----HcCCCE----EEecCCCCCCHHHHHHHHHHHHH
Confidence 34444455543211 0111 11 11222222 222222 44455556789999999999999
Q ss_pred cCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC----hhhHHHHHhcCCeEEEC-ccchh-
Q 012333 235 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAGVKVSHC-PASAM- 308 (466)
Q Consensus 235 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~g~~~~~~-p~~~~- 308 (466)
+|+++.+|+.+..... .....+... .+.+..+.|..... ++.++++++.|+..+.+ |+..+
T Consensus 241 ~g~~V~iHa~~~~e~g-----------~~~~~la~~--~g~~~hi~H~~~~~~~~~~d~I~~~~~~gv~~~~~~ptl~~t 307 (569)
T 1e9y_B 241 YDVQVAIHTDTLNEAG-----------CVEDTMAAI--AGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFT 307 (569)
T ss_dssp TTCEEEECCCTTCSSC-----------CHHHHHHHH--TTCCEEETTTTSTTSCSTTTGGGGGGSTTEEEEECGGGCSCB
T ss_pred hCCEEEEEcCCcccch-----------HHHHHHHHH--cCCCEEEEEcccCcccccHHHHHHHHHcCCeeEeeCCccccc
Confidence 9999999997522110 011112111 23444555555443 67888888888754332 22100
Q ss_pred --------------hc-c-----------------CCccHHHHHHcCCcEEEccCCCCCCCC----CCHHHHHHHHHHHh
Q 012333 309 --------------RM-L-----------------GFAPIKEMLHADICVSLGTDGAPSNNR----MSIVDEMYLASLIN 352 (466)
Q Consensus 309 --------------~~-~-----------------~~~~~~~~~~~gi~~~~gsD~~~~~~~----~~~~~~~~~~~~~~ 352 (466)
+. . ...+++.+.+.|+++++|||+++.+.. .++|...... ...
T Consensus 308 ~~~~~~~~d~~~v~h~l~~~~~ed~~~~~~rlr~~~~a~~~~L~d~Gv~v~iGSD~~~~~~~g~~~~~~~~~~~~~-~~~ 386 (569)
T 1e9y_B 308 VNTEAEHMDMLMVCHHKDKSIKEDVQFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGRVGEVITRTWQTADKN-KKE 386 (569)
T ss_dssp TTHHHHHHHHHHHTTTCCSSCHHHHHHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCCTTSHHHHHHHHHHHH-HHH
T ss_pred cchhhhhhchhhhhhhcCcccHHHHHHhhcchhhhHHHHHHHHHhCCCEEEEeCCCCccCcccccccchhhHHHHh-Hhh
Confidence 00 0 111234456689999999999875421 1123210100 011
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCee
Q 012333 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVV 432 (466)
Q Consensus 353 ~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~ 432 (466)
.+. .........++++.++++++|.|||+++|+++++|+|++||.|||||||.+.+ ..++.
T Consensus 387 ~G~--l~~~~~~~~~ls~~~al~~~T~npA~~lGl~~~~GsIe~Gk~ADlvv~d~~~~-----------------~~~v~ 447 (569)
T 1e9y_B 387 FGR--LKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFF-----------------GVKPN 447 (569)
T ss_dssp HCS--CSSCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSSSCTTSBCCEEEECTTTT-----------------TTCCS
T ss_pred ccC--cchhhccccCCCHHHHHHHHhHHHHHHcCCCCCccCcCCCCCCCEEEECchhc-----------------CCCcc
Confidence 111 10001124569999999999999999999988899999999999999999843 15899
Q ss_pred EEEEccEEEEEC
Q 012333 433 SVMCNGQWVMKN 444 (466)
Q Consensus 433 ~v~v~G~~v~~~ 444 (466)
.||++|++||.+
T Consensus 448 ~v~~~G~iv~~~ 459 (569)
T 1e9y_B 448 MIIKGGFIALSQ 459 (569)
T ss_dssp EEEETTEEEEEE
T ss_pred EEEECCEEEEcC
Confidence 999999999875
No 41
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=100.00 E-value=7.4e-35 Score=290.62 Aligned_cols=381 Identities=13% Similarity=0.150 Sum_probs=219.0
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
++++|+|++|+++++ ..+++|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|+....+ +.
T Consensus 26 ~~~li~n~~v~~~~~----~~~~~V~I~~grI~~Ig~~~~~----~-~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~- 94 (501)
T 2vm8_A 26 DRLLIKGGKIVNDDQ----SFYADIYMEDGLIKQIGENLIV----P-GGVKTIEAHSRMVIPGGIDVHTRFQMPDQ-GM- 94 (501)
T ss_dssp CCEEEEEEEEECSSC----EEEEEEEEETTEEEEEESSCCC----C-SSSCEEECTTCEEEECEEEEEECTTCEET-TE-
T ss_pred CCEEEEeeEEECCCC----ceEeeEEEECCEEEEeccCCCC----C-CCCeEEECCCCEEeeCEEEeeeccccccc-CC-
Confidence 689999999997542 2568999999999999975321 1 25689999999999999999999954321 00
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc----CHHHHHHHHHHhCCe-EEeecccccC
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLR-ACLVQSTMDC 173 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~----~~~~~~~~~~~~g~~-~~~~~~~~~~ 173 (466)
...++.+ ...++++++||||+++++.. ......+.....+.+ ..........
T Consensus 95 -------------------~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 151 (501)
T 2vm8_A 95 -------------------TSADDFF----QGTKAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLHVD 151 (501)
T ss_dssp -------------------ECSSCHH----HHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred -------------------CcHHHHH----HHHHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHHhcCCeeEEEEEEE
Confidence 0111111 22356889999999996532 222222222221111 0000011101
Q ss_pred CCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHH
Q 012333 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 253 (466)
..+ + ......+..+..++ .+...++.++........+.+.+.++++.+++++.++.+|+.+........
T Consensus 152 ~~~----~----~~~~~~e~~~l~~~---~G~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~ 220 (501)
T 2vm8_A 152 ISE----W----HKGIQEEMEALVKD---HGVNSFLVYMAFKDRFQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQ 220 (501)
T ss_dssp CCS----C----SHHHHHHHHHHHHH---SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHH
T ss_pred ecC----C----CcccHHHHHHHHHh---CCceEEEEeeccCCCCCCCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHH
Confidence 111 1 11223333333332 344556655544444567889999999999999999999996532111111
Q ss_pred Hh--hcCCCCc--------------h-HHHHhhhccCCCCeeEEEeecCC-hhhHHHHHhcCCeEEECccchh-------
Q 012333 254 MD--TRKVDHG--------------T-VTFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVKVSHCPASAM------- 308 (466)
Q Consensus 254 ~~--~~~~~~~--------------~-~~~~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~g~~~~~~p~~~~------- 308 (466)
.. ..+.... . ...+......+.+..+.|+.... .+.++.+++.|+.+. +|....
T Consensus 221 ~~~~~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~g~~~hi~h~~~~~~~~~i~~~~~~G~~v~-~~~~~~~l~~~~~ 299 (501)
T 2vm8_A 221 QRILDLGITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYITKVMSKSSAEVIAQARKKGTVVY-GEPITASLGTDGS 299 (501)
T ss_dssp HHHHTTTCCSTHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEEEECCHHHHHHHHHHHHTTCCEE-EEEBHHHHHCCGG
T ss_pred HHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcHHHHHHHHHHHhCCCcEE-EEEChhHhhcChh
Confidence 11 1111100 0 01111111234455566654211 233455577887763 332210
Q ss_pred -------h----c----------cCCccHHHHHHcCCcEEEccCCCCCCCCCCH-----H---------HHHHHHHHHhc
Q 012333 309 -------R----M----------LGFAPIKEMLHADICVSLGTDGAPSNNRMSI-----V---------DEMYLASLINK 353 (466)
Q Consensus 309 -------~----~----------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~-----~---------~~~~~~~~~~~ 353 (466)
. . ....+++++++.|+.+++|||+.+.....++ + .+++.......
T Consensus 300 ~~~~~~~~~~~~~~~~pp~r~~~~~~~~l~~~l~~G~~~~~gtD~~~~~~~~~~~~~~~~~~~~~G~~g~e~~l~~~~~~ 379 (501)
T 2vm8_A 300 HYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTLIPEGTNGTEERMSVIWDK 379 (501)
T ss_dssp GGGCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSCCCBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHH
T ss_pred hhcccccccCceEEECCCCCCCcchHHHHHHHHhcCceEEEEecCCCCChhhhhcccCChhhCCCCCccHHHHHHHHHHH
Confidence 0 0 0122345689999999999998765311000 0 01111111111
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCC--------cccceecc
Q 012333 354 GREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHD--------RITSLVYC 425 (466)
Q Consensus 354 ~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~--------~~~~~~~~ 425 (466)
. ....++|++++++++|.|||+++|+++++|+|++|++|||||||.+.....+..+ |+.....
T Consensus 380 ~--------~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~s~~~~~~~~g~~~- 450 (501)
T 2vm8_A 380 A--------VVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWDPDSVKTISAKTHNSSLEYNIFEGMEC- 450 (501)
T ss_dssp H--------TTTTSSCHHHHHHHHTHHHHHHHTCTTTSSCCCTTSBCCEEEEEEEEEEECCTTTSSSSCSCCTTTTCEE-
T ss_pred H--------HHcCCCCHHHHHHHHhHhHHHHhCCCCCCCccCCCCcCCEEEEcCCCCeeeccccccccccCCCccCcEe-
Confidence 0 1223599999999999999999999878999999999999999998422122221 2211111
Q ss_pred cCCCCeeEEEEccEEEEECCeee-eccHHHHH
Q 012333 426 MRTENVVSVMCNGQWVMKNKKIL-LLMRGRLF 456 (466)
Q Consensus 426 ~~~~~v~~v~v~G~~v~~~g~~~-~~~~~~~~ 456 (466)
...|..||++|++||++|+++ +...|+++
T Consensus 451 --~~~v~~v~v~G~~v~~~g~~~~~~~~G~~l 480 (501)
T 2vm8_A 451 --RGSPLVVISQGKIVLEDGTLHVTEGSGRYI 480 (501)
T ss_dssp --EEEEEEEEETTEEEEETTEECCCTTCCCBC
T ss_pred --CceEEEEEECCEEEEECCeEccCCCCCcee
Confidence 247899999999999999987 44445544
No 42
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=100.00 E-value=6.9e-35 Score=280.87 Aligned_cols=347 Identities=14% Similarity=0.101 Sum_probs=210.4
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCC-cEEeecccccccCCcccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS-QILLPGFVNTHVHTSQQLAK 95 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G-~~v~PG~ID~H~H~~~~~~~ 95 (466)
.++|++|+|++|++ +. +++|+|+||+|++|++... + ++.++||++| ++|+|||||+|+|+.....
T Consensus 3 ~~~~~~i~~~~v~~--~~-----~~~v~i~~g~I~~ig~~~~-----~-~~~~~iD~~g~~~v~PG~ID~H~H~~~~~~- 68 (379)
T 2ics_A 3 LDYDLLIKNGQTVN--GM-----PVEIAIKEKKIAAVAATIS-----G-SAKETIHLEPGTYVSAGWIDDHVHCFEKMA- 68 (379)
T ss_dssp -CEEEEEEEEECTT--SC-----EEEEEEETTEEEEEESCCC-----C-CEEEEEECCTTCEEEECEEEEEECCCTTSS-
T ss_pred ccccEEEECCEEEc--CC-----cceEEEECCEEEEecCCCC-----C-CCCcEEeCCCCEEEccCEEEeccccCccCc-
Confidence 34689999999995 21 4699999999999987431 1 2457999999 9999999999999953210
Q ss_pred cccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc---cCHHHHHHHHHHhCCeE--Eeeccc
Q 012333 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRA--CLVQST 170 (466)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~---~~~~~~~~~~~~~g~~~--~~~~~~ 170 (466)
..+.. ....++++||||+++++. .....+.+..+..+.+. +.....
T Consensus 69 --------------------~~~~~---------~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 119 (379)
T 2ics_A 69 --------------------LYYDY---------PDEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISK 119 (379)
T ss_dssp --------------------SSCCC---------HHHHTGGGTEEEEEEESSSCTTTHHHHHHHHHTSSSEEEEEEESST
T ss_pred --------------------cccCc---------hhhhHhhCceeEEEcCCCCCccCHHHHHHHHHhhcccEEEEccccc
Confidence 00000 113478999999998763 23445555555555332 222111
Q ss_pred ccCCCCCCcc-cccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHH-cCCccceeccCCcc
Q 012333 171 MDCGEGLPAS-WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIPY 248 (466)
Q Consensus 171 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~v~~H~~~~~~ 248 (466)
. |..+. ..........+...+.++++.. +-..++.+.........+.+.+.++++++++ +++++.+|+.+...
T Consensus 120 --~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~ 194 (379)
T 2ics_A 120 --W--GIVAQDELADLSKVQASLVKKAIQELPD-FVVGIKARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPP 194 (379)
T ss_dssp --T--TTSSSCTTSSGGGCCHHHHHHHHHHCTT-TEEEEEEEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSS
T ss_pred --c--CCCCHHHHHHHHHHHHHHHHHHHHhhhC-cceEEEEeccccccccchHHHHHHHHHHHHHhcCCeEEEeCCCCcc
Confidence 1 22111 1100011112233344433211 1122333333333344677888899999999 99999999976432
Q ss_pred hhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeec--------C-Ch---hhHHHHHhcCCeEEECccchhhccCCccH
Q 012333 249 ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW--------V-NH---TEIGLLSRAGVKVSHCPASAMRMLGFAPI 316 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~--------~-~~---~~~~~~~~~g~~~~~~p~~~~~~~~~~~~ 316 (466)
....... .+.. + ..+.|+.. . ++ +.++++++.|+.+.++|.+.. ....++
T Consensus 195 ~~~~~~~-------------~~~~-g--~~~~H~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~p~~~~--~~~~~~ 256 (379)
T 2ics_A 195 HLDEILA-------------LMEK-G--DVLTHCFNGKENGILDQATDKIKDFAWQAYNKGVVFDIGHGTDS--FNFHVA 256 (379)
T ss_dssp CHHHHHH-------------HCCT-T--CEEESTTCCSTTSSEETTTTEECHHHHHHHHTTCEEECCCTTTS--CCHHHH
T ss_pred hHHHHHH-------------Hhhc-C--CeeeeccCCCccchhhccCHHHHHHHHHHHHcCCEEEecCCCCC--cCHHHH
Confidence 2111111 1110 1 13344332 2 22 788888899999999987442 234568
Q ss_pred HHHHHcC-CcEEEccCCCCC----CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcc
Q 012333 317 KEMLHAD-ICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (466)
Q Consensus 317 ~~~~~~g-i~~~~gsD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~ 391 (466)
+.+++.| ++++++||+++. .+...+...+... .. .++|++++++++|.|||++||+++ +
T Consensus 257 ~~~~~~G~~~~~l~TD~~~~~~~~~~~~~~~~~l~~~--~~-------------~~ls~~~~~~~~T~n~A~~lgl~~-~ 320 (379)
T 2ics_A 257 ETALREGMKAASISTDIYIRNRENGPVYDLATTMEKL--RV-------------VGYDWPEIIEKVTKAPAENFHLTQ-K 320 (379)
T ss_dssp HHHHHTTCCCSBCCCCBCHHHHHSSSCCCHHHHHHHH--HH-------------HTCCHHHHHHTTTHHHHHHTTCTT-S
T ss_pred HHHHHcCCCcceEeccCcccCCCCCcHhHHHHHHHHH--HH-------------cCCCHHHHHHHHHHHHHHHhCCCC-C
Confidence 8899999 888999998521 1122233333221 11 149999999999999999999976 8
Q ss_pred cccccCCccCEEEEcCCCCCCCCcCCcc-cceecccCCCCeeEEEEccEEEEECCee
Q 012333 392 GSLEAGKKADMVVVDPFSWPMVPVHDRI-TSLVYCMRTENVVSVMCNGQWVMKNKKI 447 (466)
Q Consensus 392 G~i~~G~~ADlvv~d~~~~~~~~~~~~~-~~~~~~~~~~~v~~v~v~G~~v~~~g~~ 447 (466)
|+|++|++|||||+|.+.+. ....++ ...++.....+|..||++|++||++|..
T Consensus 321 G~l~~G~~ADlvv~d~~~~~--~~~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~~ 375 (379)
T 2ics_A 321 GTLEIGKDADLTIFTIQAEE--KTLTDSNGLTRVAKEQIRPIKTIIGGQIYDNEGHH 375 (379)
T ss_dssp SSCCTTSBCCEEEEEEEEEE--EEEECTTSCEEEEEEEEEEEEEEETTEEEEC----
T ss_pred cCCCCCCccCEEEEeccccc--ceeecCCCCEEEeeeeeeeEEEEECCEEEecCCcc
Confidence 99999999999999976221 011111 1111211223899999999999999863
No 43
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.6e-34 Score=283.41 Aligned_cols=376 Identities=13% Similarity=0.087 Sum_probs=221.1
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
++++|+|++|+++++ . .+++|+|+||+|++|++.. .+.++||++|++|+|||||+|+|+.......
T Consensus 1 m~~~i~~~~v~~~~~--~--~~~~v~I~~G~I~~i~~~~--------~~~~viD~~g~~v~PG~ID~H~H~~~~~~~~-- 66 (490)
T 3dc8_A 1 MSTVIKGGTIVTADL--T--YKADVKVEGGRIVEIGPNL--------SGAETLDATGCYVMPGGIDPHTHLEMPFMGT-- 66 (490)
T ss_dssp -CEEEESCEEECSSC--E--EECEEEEETTEEEEEESSC--------CCSEEEECTTCEEEECEEEEEECTTCEETTE--
T ss_pred CcEEEEccEEECCCC--c--eeeeEEEECCEEEEeccCC--------CCCeEEECCCCEEecCEEeeccccCCCCCCC--
Confidence 478999999997543 2 5679999999999999753 2568999999999999999999995422100
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc----CHHHHHHHHHHhCCeEEeecccccCC
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCG 174 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (466)
...++.. ...+.++++|||++++++.. ......+.......+.........
T Consensus 67 -------------------~~~e~~~----~~~~aa~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~~~~~d~~~~~-- 121 (490)
T 3dc8_A 67 -------------------YSSDDFE----SGTRAALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHM-- 121 (490)
T ss_dssp -------------------ECSCCHH----HHHHHHHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTTTCSSEEEEEE--
T ss_pred -------------------CCHHHHH----HHHHHHHHcCEEeecccCCCCCCcCHHHHHHHHHHHhhcccceeeeEE--
Confidence 1111111 22355789999999997532 223333333332212111111110
Q ss_pred CCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHH
Q 012333 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (466)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (466)
++. ......+.+..++.+ +.+...++.++........+++.+.++++.++++|.++.+|+.+.........
T Consensus 122 -~~~-----~~~~~~l~el~~l~~---~~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~ 192 (490)
T 3dc8_A 122 -AIT-----WWGEQVFNEMETIVK---DKGINTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLVHAENGDVVAQLQA 192 (490)
T ss_dssp -ECC-----SCSHHHHHHHHHHHH---HSCCCEEEEESCSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHH
T ss_pred -EEe-----cCcHHHHHHHHHHHH---hCCCCEEEEEecCCCCccCCHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHH
Confidence 011 012222333333331 34445567666666667779999999999999999999999764322111100
Q ss_pred hh--cCC--------CCch-------HHHHhhhccCCCCeeEEEeecCCh----hhHHHHHhcCCeEE--ECccchhh--
Q 012333 255 DT--RKV--------DHGT-------VTFLDKIEFLQNNLLSAHTVWVNH----TEIGLLSRAGVKVS--HCPASAMR-- 309 (466)
Q Consensus 255 ~~--~~~--------~~~~-------~~~~~~~~~~~~~~~~~H~~~~~~----~~~~~~~~~g~~~~--~~p~~~~~-- 309 (466)
.. .+. .... ...+...+..+.+. |..|++. +.++.+++.|..+. +||.....
T Consensus 193 ~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~g~~l---hi~HvSt~~~~~li~~ak~~G~~Vt~e~~ph~l~l~~ 269 (490)
T 3dc8_A 193 KLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMAGCPV---YIVHTSCEQAHEAIRRARAKGMRVFGEPLIQHLTLDE 269 (490)
T ss_dssp HHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCE---EESSCCSHHHHHHHHHHHHTTCCEEECCBHHHHHCCG
T ss_pred HHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCcE---EEEeCCCHHHHHHHHHHHHCCCeEEEEEchHHheeCH
Confidence 00 000 0000 01122222233344 4444443 34566667777665 45532210
Q ss_pred -------------c---------cCCccHHHHHHcCCcEEEccCCCCCCCCC------CHHH--------HHHHHHHHhc
Q 012333 310 -------------M---------LGFAPIKEMLHADICVSLGTDGAPSNNRM------SIVD--------EMYLASLINK 353 (466)
Q Consensus 310 -------------~---------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~------~~~~--------~~~~~~~~~~ 353 (466)
. .....+++.+..|...+++|||.|+.... ++.. +..+..+...
T Consensus 270 ~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id~i~sDh~p~~~~~K~~g~~~f~~~~~G~~gle~~l~~~~~~ 349 (490)
T 3dc8_A 270 TEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDHCAFTTEQKRFGVGDFTRIPNGTGGLEDRMPMLWTY 349 (490)
T ss_dssp GGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHH
T ss_pred HHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCceEEECCCCCCCHHHhhccCCChhhCCCChHHHHHHHHHHHHH
Confidence 0 01124566788899999999998763110 0000 0001111111
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCC-------cCCcccceecc
Q 012333 354 GREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVP-------VHDRITSLVYC 425 (466)
Q Consensus 354 ~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~-------~~~~~~~~~~~ 425 (466)
.....++|++++++++|.|||+++|+++++|+|++|++|||||||++ .|+..+ ..+|+....+
T Consensus 350 --------~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~l~~G~~ADlvv~d~~~~~~i~~~~~~s~~~~sp~~g~~~- 420 (490)
T 3dc8_A 350 --------GVATGRITMNEFVAVTSTNIAKILNIYPKKGAILVGADADLVVWDPKRSKTISAKTQQSAIDYNVFEGKTV- 420 (490)
T ss_dssp --------HTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEEEEEEEECCTTTCSSSSSCCTTTTCEE-
T ss_pred --------HHHcCCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCcCCEEEEecCcceEechhhccccCCCCcccCcEE-
Confidence 01234599999999999999999999878999999999999999988 332211 1223322211
Q ss_pred cCCCCeeEEEEccEEEEECCeeeecc-HHHHH
Q 012333 426 MRTENVVSVMCNGQWVMKNKKILLLM-RGRLF 456 (466)
Q Consensus 426 ~~~~~v~~v~v~G~~v~~~g~~~~~~-~~~~~ 456 (466)
..+|..||++|++||++|++.... .|+++
T Consensus 421 --~g~v~~t~~~G~~v~~~g~~~~~~~~G~~~ 450 (490)
T 3dc8_A 421 --TGLPRFTLTRGVVSIEEGTVKTQEGHGEFV 450 (490)
T ss_dssp --EEEEEEEEETTEEEEETTEECCCTTCCCBC
T ss_pred --eeEEEEEEECCEEEEECCEEcccCCCceec
Confidence 247999999999999999987543 45544
No 44
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=100.00 E-value=3.3e-34 Score=283.26 Aligned_cols=362 Identities=17% Similarity=0.176 Sum_probs=210.3
Q ss_pred CcccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccc
Q 012333 15 LGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (466)
Q Consensus 15 ~~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~ 94 (466)
...|++++|+|++|++++ ...+.+++|+|+||+|++|++... + .+.++||++|++|+|||||+|+|+.....
T Consensus 43 ~~~mm~~~i~~~~v~~~~--~~~~~~~~v~i~~g~I~~i~~~~~-----~-~~~~~iD~~g~~v~PGlID~H~H~~~~~~ 114 (467)
T 1xrt_A 43 DRWMLKLIVKNGYVIDPS--QNLEGEFDILVENGKIKKIDKNIL-----V-PEAEIIDAKGLIVCPGFIDIHVHLRDPGQ 114 (467)
T ss_dssp ---CCEEEEESCEEEEGG--GTEEEECEEEEETTEEEEEESSCC-----C-SSEEEEECTTSEEEECEEEEEECCCTTTC
T ss_pred ccceeeEEEEeeEEECCC--CCceecceEEEECCEEEEecCCCC-----C-CCCcEEeCCCCEEccCEEEEeecccCCCC
Confidence 345678999999999754 334577899999999999987432 1 24579999999999999999999843100
Q ss_pred ccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC--------HHHHHHHHHHhC-CeEE
Q 012333 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVELLG-LRAC 165 (466)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~--------~~~~~~~~~~~g-~~~~ 165 (466)
+| .++. ....+.++++||||+++++... .....+.....| ++.+
T Consensus 115 ----------~~-------------~~~~----~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 167 (467)
T 1xrt_A 115 ----------TY-------------KEDI----ESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVL 167 (467)
T ss_dssp ----------TT-------------TCCH----HHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEE
T ss_pred ----------Cc-------------hhhH----HHHHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEE
Confidence 00 0111 1223557899999999987421 234455556667 6654
Q ss_pred eecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccC
Q 012333 166 LVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (466)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 245 (466)
....... ....... .+..++.+. +... +........+.+.+.++++.+++++.++.+|+.+
T Consensus 168 ~~g~~~~-------~~~~~~~----~~~~~l~~~----g~~~----i~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~ 228 (467)
T 1xrt_A 168 PTGTITK-------GRKGKEI----ADFYSLKEA----GCVA----FTDDGSPVMDSSVMRKALELASQLGVPIMDHCED 228 (467)
T ss_dssp ECBCSBG-------GGCSSSB----CCHHHHHHH----TCCC----BCCTTSCCCCHHHHHHHHHHHHHHTCEEEECCCG
T ss_pred EEeeecC-------CCCcccH----HHHHHHHHc----CCEE----EEcCCCCCCCHHHHHHHHHHHHhcCCEEEEECCC
Confidence 3322111 1000011 111222221 1111 2334445678899999999999999999999976
Q ss_pred CcchhHHH-----HhhcC---CC--CchHHHHhhhccCCCCeeEEEeecCChh----hHHHHHhcC--CeEEECccchhh
Q 012333 246 IPYENQVV-----MDTRK---VD--HGTVTFLDKIEFLQNNLLSAHTVWVNHT----EIGLLSRAG--VKVSHCPASAMR 309 (466)
Q Consensus 246 ~~~~~~~~-----~~~~~---~~--~~~~~~~~~~~~~~~~~~~~H~~~~~~~----~~~~~~~~g--~~~~~~p~~~~~ 309 (466)
........ ...++ .. ....................|..+++.. .++++++.| +.+.+||.....
T Consensus 229 ~~~~~~~l~~g~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~g~~~hi~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~ 308 (467)
T 1xrt_A 229 DKLAYGVINEGEVSALLGLSSRAPEAEEIQIARDGILAQRTGGHVHIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLF 308 (467)
T ss_dssp GGGTC--------------------CHHHHHHHHHHHHHHHCCEEEESCCCSHHHHHHHHHHHHTTCCEEEEECGGGGC-
T ss_pred HHHHHHHHhcCccchhcccccCChHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHhcCCcEEEeccHHHHhc
Confidence 44321110 00000 00 0000000000111111224456665533 345555788 556788864211
Q ss_pred -------------c-------cCCccHHHHHHcCCcEEEccCCCCCCCCC-CHHHHH---------HHHHHHhccccccc
Q 012333 310 -------------M-------LGFAPIKEMLHADICVSLGTDGAPSNNRM-SIVDEM---------YLASLINKGREVFA 359 (466)
Q Consensus 310 -------------~-------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~-~~~~~~---------~~~~~~~~~~~~~~ 359 (466)
. ....+++.+++.|+++++|||+.+.+... ++|..+ +...... ..
T Consensus 309 ~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~Gv~~~lgTD~~~~~~~~~~~~~~~~~g~~g~e~~l~~~l~-~~---- 383 (467)
T 1xrt_A 309 TEREVLNSGANARVNPPLRKKEDRLALIEGVKRGIIDCFATDHAPHQTFEKELVEFAMPGIIGLQTALPSALE-LY---- 383 (467)
T ss_dssp ---------------------CCHHHHHHHHHHTCSCEECCCBCCCCC-----------CCCCGGGHHHHHHH-HH----
T ss_pred CHhHhhccCceEEEcCCCCCHHHHHHHHHHHhCCceEEEeeCCCCCChhHhcccccCCCCCccHHHHHHHHHH-HH----
Confidence 0 12235677899999999999997654321 122211 1111111 00
Q ss_pred CCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCc--------CCcccceecccCCCCe
Q 012333 360 NGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HDRITSLVYCMRTENV 431 (466)
Q Consensus 360 ~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~~~~~~~~~v 431 (466)
....+|++++++++|.|||+++|++ +|+|++||+|||||+|.++....+. .+|+..+.. ..+|
T Consensus 384 ----~~g~ls~~~al~~aT~n~A~~lgl~--~G~I~~G~~ADlvvld~~~~~~i~~~~~~~~~~~~p~~g~~~---~~~V 454 (467)
T 1xrt_A 384 ----RKGIISLKKLIEMFTINPARIIGVD--LGTLKLGSPADITIFDPNKEWILNEETNLSKSRNTPLWGKVL---KGKV 454 (467)
T ss_dssp ----HTTSSCHHHHHHHHTHHHHHHHTCS--CSCCCTTSBCCEEEEEEEEEEECSTTTCCSSCCCCTTTTCEE---EEEE
T ss_pred ----HcCCCCHHHHHHHhccCHHHHhCCC--cccccCCCCCCEEEEeCCCCEEEChHHccCcCCCCCccCCEE---eEEE
Confidence 0113999999999999999999995 8999999999999999883211111 223332211 3579
Q ss_pred eEEEEccEEEEEC
Q 012333 432 VSVMCNGQWVMKN 444 (466)
Q Consensus 432 ~~v~v~G~~v~~~ 444 (466)
..||++|++||++
T Consensus 455 ~~viv~G~~v~~~ 467 (467)
T 1xrt_A 455 IYTIKDGKMVYKD 467 (467)
T ss_dssp EEEEETTEEEEEC
T ss_pred EEEEECCEEEecC
Confidence 9999999999985
No 45
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=100.00 E-value=4.4e-33 Score=272.53 Aligned_cols=355 Identities=17% Similarity=0.161 Sum_probs=215.4
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|++++ ....+++|+|+||+|++|++. ++.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~i~~~~v~~~~---~~~~~~~v~i~~g~I~~i~~~---------~~~~~id~~g~~v~PG~iD~H~H~~~~~~------ 63 (426)
T 2z00_A 2 ILIRNVRLVDAR---GERGPADVLIGEGRILSLEGG---------EAKQVVDGTGCFLAPGFLDLHAHLREPGE------ 63 (426)
T ss_dssp EEEEEEEEEETT---EEEEEEEEEEETTEEEESBCC---------CCSEEEECTTCEEEECEEEEEECCCTTTC------
T ss_pred EEEEeeEEECCC---CceecceEEEECCEEEEEecC---------CCceEEeCCCCEEecCEEEeccccCCCCC------
Confidence 689999999643 345788999999999999864 14579999999999999999999953210
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC--------HHHHHHHHHHhC-CeEEeecccc
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVELLG-LRACLVQSTM 171 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~--------~~~~~~~~~~~g-~~~~~~~~~~ 171 (466)
.| .++. ......++++||||+++++... .....+.....+ ++.+....+.
T Consensus 64 ----~~-------------~~~~----~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (426)
T 2z00_A 64 ----EV-------------KEDL----FSGLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHPAAALT 122 (426)
T ss_dssp ----TT-------------TCCH----HHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECCEECSB
T ss_pred ----Cc-------------hHHH----HHHHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEEEEEee
Confidence 01 0111 1223568899999999986421 334455566666 6653322111
Q ss_pred cCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhH
Q 012333 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (466)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (466)
+....... .+..++.+. + .. .++.+..+..+.+.+.++++.++++|+++.+|+.+......
T Consensus 123 -------~~~~~~~~----~~~~~l~~~----g--~~--~i~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~ 183 (426)
T 2z00_A 123 -------EKQEGKTL----TPAGLLREA----G--AV--LLTDDGRTNEDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRN 183 (426)
T ss_dssp -------GGGCSSSB----CCHHHHHHH----T--CC--EEECTTSCCCCHHHHHHHHHHHGGGTCCEEECCCCHHHHTT
T ss_pred -------cCCChhhH----HHHHHHHHc----C--CE--EEECCCcCCCCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhh
Confidence 11100011 111222221 1 11 13445556778999999999999999999999976432110
Q ss_pred ---------HHHhhcCCCC-----chHHHHhhhcc------CCCCeeEEEeecCC-hhhHHHHHhcCCeE--EECccchh
Q 012333 252 ---------VVMDTRKVDH-----GTVTFLDKIEF------LQNNLLSAHTVWVN-HTEIGLLSRAGVKV--SHCPASAM 308 (466)
Q Consensus 252 ---------~~~~~~~~~~-----~~~~~~~~~~~------~~~~~~~~H~~~~~-~~~~~~~~~~g~~~--~~~p~~~~ 308 (466)
......+... .....+..... .+.+..+.|+.... .+.++++++.|+.+ .+||.+..
T Consensus 184 ~~~~~g~~~~~~g~~~~~~~~e~~~~~~~~~~a~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~ 263 (426)
T 2z00_A 184 GVMNDGPLADLLGLPGNPPEAEAARIARDLEVLRYALRRSPATPRLHVQHLSTKRGLELVREAKRAGLPVTAEATPHHLT 263 (426)
T ss_dssp CSEECSHHHHHHTCCEECHHHHHHHHHHHHHHHHHHHHHCSSCCCEEETTCCCHHHHHHHHHHHHTTCCEEEEECHHHHH
T ss_pred hhhccCccchhcccccCChHHHHHHHHHHHHHHhhccccccCCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEEchHHhE
Confidence 0000000000 00112222222 45667788887532 35677788888664 46887543
Q ss_pred hc-----------cCCcc---------HHHHHHcCCcEEEccCCCCCCCCC--CHHH---------HHHHHHHHhccccc
Q 012333 309 RM-----------LGFAP---------IKEMLHADICVSLGTDGAPSNNRM--SIVD---------EMYLASLINKGREV 357 (466)
Q Consensus 309 ~~-----------~~~~~---------~~~~~~~gi~~~~gsD~~~~~~~~--~~~~---------~~~~~~~~~~~~~~ 357 (466)
.. ...+| ++++++.|+++++|||+.|..... +++. +..........
T Consensus 264 ~~~~~~~~~~~~~~~~~plr~~~~~~~l~~~l~~G~~~~lgsD~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--- 340 (426)
T 2z00_A 264 LTEEALRTFDPLFKVAPPLRGEEDREALLEGLLDGTLDAIATDHAPHTLAEKEKDLLRAPFGIPSLEVAFPLLYTEL--- 340 (426)
T ss_dssp CCGGGGGGCCGGGCCSSCCCCHHHHHHHHHHHHHTSSCEECCCBCCCCTTGGGSCTTTSCCCBCCTTTHHHHHHHHT---
T ss_pred eCHhHhhccCceEEEeCCCCCHHHHHHHHHHHhCCCcEEEecCCCCCCHHHccCChhhCCCCcccHHHHHHHHHHHH---
Confidence 21 12233 335667999999999985543210 0000 00111111100
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCC--c-----CCcccceecccCCCC
Q 012333 358 FANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP--V-----HDRITSLVYCMRTEN 430 (466)
Q Consensus 358 ~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~--~-----~~~~~~~~~~~~~~~ 430 (466)
.....+|++++++++|.|||+++|++ +|+|++|++|||||+|.+++...+ . .+|+..+.+ ..+
T Consensus 341 -----~~~~~ls~~~~l~~~T~n~A~~lgl~--~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~p~~g~~~---~~~ 410 (426)
T 2z00_A 341 -----HLKRGFPLQRLVELFTDGPRRVLGLP--PLHLEEGAEASLVLLSPKERPVDPSAFASKARYSPWAGWVL---GGW 410 (426)
T ss_dssp -----HHHHCCCHHHHHHHHTHHHHHHHTCC--CCCSSTTSBCCEEEEECCCEECCGGGCSSSCCCCTTTTCEE---CCE
T ss_pred -----HHcCCCCHHHHHHHHhhhHHHHhCCC--cccccCCCCCCEEEEeCCcEEEcHHHccccCCCCCcCCCEE---EEE
Confidence 00124999999999999999999994 899999999999999997543222 1 222222211 358
Q ss_pred eeEEEEccEEEEECCe
Q 012333 431 VVSVMCNGQWVMKNKK 446 (466)
Q Consensus 431 v~~v~v~G~~v~~~g~ 446 (466)
|..||++|++||++++
T Consensus 411 v~~t~v~G~~v~~~~~ 426 (426)
T 2z00_A 411 PVLTLVAGRIVHEALK 426 (426)
T ss_dssp EEEEEETTEEEEECCC
T ss_pred EEEEEECCEEEEecCC
Confidence 9999999999999875
No 46
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=100.00 E-value=4.5e-34 Score=279.67 Aligned_cols=346 Identities=18% Similarity=0.187 Sum_probs=205.8
Q ss_pred CCCCCCCCCCcccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhh-------hhccCCCeEEeCCCcEE
Q 012333 6 SGGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQIL 78 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~-------~~~~~~~~~iD~~G~~v 78 (466)
++|++...+....+|++|+|++|++.. . +..++|+|+||||++|++..+... ....+++++||++|++|
T Consensus 54 ~~~~~~~~~~~~~~dllI~n~~vvd~~---g-~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v 129 (570)
T 4ac7_C 54 MGENGTYTRTENVLDLLLTNALILDYT---G-IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIV 129 (570)
T ss_dssp TTBCSSCCTTTTBCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEE
T ss_pred cCcCCCCCcccCCCCEEEECeEEECCC---C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEE
Confidence 444433322344689999999999632 2 367899999999999998643200 00123678999999999
Q ss_pred eecccccccCCcccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC---------
Q 012333 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------- 149 (466)
Q Consensus 79 ~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~--------- 149 (466)
+|||||+|+|+.. +.. ...++.+||||+++.+...
T Consensus 130 ~PG~ID~HvH~~~----------------------------Pg~--------~~aAl~gGvTTvv~gg~~p~~~~n~~p~ 173 (570)
T 4ac7_C 130 TAGGIDTHVHFIN----------------------------PDQ--------VDVALANGITTLFGGGTGPAEGSKATTV 173 (570)
T ss_dssp EECEEEEEEECCC----------------------------TTH--------HHHHHHTTEEEEEEECSSSCHHHHHSSC
T ss_pred eeCEEecccccCC----------------------------cch--------HHHHHhcCCeEEEecCcCcccccCCcCc
Confidence 9999999999821 111 1458899999999633210
Q ss_pred ------HHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHH
Q 012333 150 ------VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (466)
Q Consensus 150 ------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 223 (466)
...+.++.....++..+... +.. . ...+..+. .+.+...++. ...+..+++
T Consensus 174 ~~~~~~l~~~l~aa~~~~v~~~~~g~------~~~------~---~l~el~el----~~aGa~gfK~----~~~~~~~~~ 230 (570)
T 4ac7_C 174 TPGPWNIEKMLKSTEGLPINVGILGK------GHG------S---SIAPIMEQ----IDAGAAGLKI----HEDWGATPA 230 (570)
T ss_dssp CCHHHHHHHHHHHHTTCSSEEEEEEE------CCC------S---SHHHHHHH----HHHTCCEEEE----EGGGCCCHH
T ss_pred CCcHHHHHHHHHHhhhCCeeEEEEec------cCC------c---CHHHHHHH----HHcCCCeEee----ccCCCCCHH
Confidence 11122222222333222110 000 1 11222222 2223233333 233456889
Q ss_pred HHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCee---EEEeecC-ChhhHHHHHhcCCe
Q 012333 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLL---SAHTVWV-NHTEIGLLSRAGVK 299 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~H~~~~-~~~~~~~~~~~g~~ 299 (466)
.+.++++.+++++.++.+|+.+...... ..+.+..+. +.... +.|+... .++.++++.+.++.
T Consensus 231 ~L~~aL~~A~~~g~~V~iHae~l~e~g~-----------Vedalea~~--Gr~ih~~HiEgag~~hapd~i~~~~~~~vl 297 (570)
T 4ac7_C 231 SIDRSLTVADEADVQVAIHSDTLNEAGF-----------LEDTLRAIN--GRVIHSFHVEGAGGGHAPDIMAMAGHPNVL 297 (570)
T ss_dssp HHHHHHHHHHHHTCEEEEECCTTCSSCC-----------HHHHHHHHT--TCCEEETTTTSTTSSSTTTGGGGGGSTTEE
T ss_pred HHHHHHHHHHHcCCEEEEEcCCcchhhH-----------HHHHHHHhC--CCcceeEeeeccccccChHHHHHhccCCcc
Confidence 9999999999999999999985322110 111222211 11111 1111111 14555555555554
Q ss_pred EEE-Ccc---ch------------------------------hhccCCccHHHHHHcCCcEEEccCCCCCCCCCCHH-HH
Q 012333 300 VSH-CPA---SA------------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIV-DE 344 (466)
Q Consensus 300 ~~~-~p~---~~------------------------------~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~-~~ 344 (466)
... +|. .. .+....++++.+++.|+.+++|||++..+...... ..
T Consensus 298 ps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~~a~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~~~~~ 377 (570)
T 4ac7_C 298 PSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRT 377 (570)
T ss_dssp EBCCGGGSSCBTTHHHHHHHHHHHHTTCCTTCHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCHHHHH
T ss_pred ccccCCCCCcccchhHHhhhheeeecccCccccchhHHHHhhhhhhhcccccchhhcCCEEEEECcccccCCcCcccCcH
Confidence 432 222 00 01123457788999999999999998644222222 22
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceec
Q 012333 345 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVY 424 (466)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~ 424 (466)
...+......+..........+.++++++|+++|.|||+++|+++++|+|++||.|||||||.+.+.
T Consensus 378 ~~~a~~~~~~rg~l~~~~~~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~~~------------- 444 (570)
T 4ac7_C 378 WQTADKMKKQRGPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFFG------------- 444 (570)
T ss_dssp HHHHHHHHHHHCSCTTCCTTCCHHHHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGGTT-------------
T ss_pred HHHHHHHHHhcCCCCCccccccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECchhcc-------------
Confidence 2222211111111111112346799999999999999999999988999999999999999988332
Q ss_pred ccCCCCeeEEEEccEEEEEC
Q 012333 425 CMRTENVVSVMCNGQWVMKN 444 (466)
Q Consensus 425 ~~~~~~v~~v~v~G~~v~~~ 444 (466)
.++..||++|++||+.
T Consensus 445 ----~~v~~t~~~G~~v~~~ 460 (570)
T 4ac7_C 445 ----VKADRVIKGGIIAYAQ 460 (570)
T ss_dssp ----TSCSEEEETTEEEEEE
T ss_pred ----CceEEEEECCEEEEcc
Confidence 4789999999999974
No 47
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=100.00 E-value=1.3e-33 Score=275.86 Aligned_cols=366 Identities=14% Similarity=0.146 Sum_probs=216.0
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
+|++|+|++|++.+ . ...+++|+|+||+|++|++..+. .+.++||++|++|+|||||+|+|+....
T Consensus 1 m~~~i~~~~v~~~~--~-~~~~~~v~i~~g~I~~i~~~~~~------~~~~~id~~g~~v~PG~iD~H~H~~~~~----- 66 (428)
T 3mpg_A 1 MNYLFKNGRYMNEE--G-KIVATDLLVQDGKIAKVAENITA------DNAEVIDVNGKLIAPGLVDVHVHLREPG----- 66 (428)
T ss_dssp CEEEEEEEEEECSS--S-CEEEEEEEEESSBEEECCSSCCC------TTSEEEECTTCEEEECEEEEEECCCTTT-----
T ss_pred CcEEEEeeEEEeCC--C-CeeeeeEEEECCEEEEecCCCCC------CCCeEEECCCCEEeeCEEEEeeccCCCC-----
Confidence 47999999999732 2 45678999999999999985431 3678999999999999999999984310
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-----C---HHHHHHHHHHhCCeEEeeccc
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----H---VSEMAKAVELLGLRACLVQST 170 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-----~---~~~~~~~~~~~g~~~~~~~~~ 170 (466)
....++ .....+.++.+|||++++++.. . .....+.....+...+.....
T Consensus 67 ------------------~~~~~~----~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (428)
T 3mpg_A 67 ------------------GEHKET----IETGTLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGA 124 (428)
T ss_dssp ------------------CTTTCC----HHHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEE
T ss_pred ------------------CCchhH----HHHHHHHHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCCcEEEEEee
Confidence 001111 1123355789999999997532 1 233444555556544433322
Q ss_pred ccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 012333 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (466)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (466)
...+. . .... .+..+.. +.+. .. +.....+..+++.+.++++.++++|.++.+|+.+.....
T Consensus 125 ~~~~~--~----~~~l----~~~~~l~----~~G~--~~--~~~~~~~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~ 186 (428)
T 3mpg_A 125 ITVRQ--A----GSEM----TDFETLK----ELGA--FA--FTDDGVGVQDASMMLAAMKRAAKLNMAVVAHCEENTLIN 186 (428)
T ss_dssp SBGGG--C----SSSB----CCHHHHH----HTTC--CC--EECTTSCCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCT
T ss_pred EecCC--C----cchH----HHHHHHH----HhCC--EE--EECCCcCCCCHHHHHHHHHHHHhcCCeEEEECCChhHhh
Confidence 21110 0 0000 0111222 1121 11 344556677899999999999999999999997642211
Q ss_pred -------HHHHhhcCCCCc-h------HHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCeEE--ECccchhhc---
Q 012333 251 -------QVVMDTRKVDHG-T------VTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKVS--HCPASAMRM--- 310 (466)
Q Consensus 251 -------~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~~~--~~p~~~~~~--- 310 (466)
.........+.. . ...+......+.+..+.|.... +-+.++.+++.|+.+. +||+.....
T Consensus 187 ~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i~H~s~~~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~ 266 (428)
T 3mpg_A 187 KGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVCHVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDD 266 (428)
T ss_dssp TCSEETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHHHHHHHHHHHHTTCCEEECBCHHHHHCCGGG
T ss_pred hHHhhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHhcCCCEEEEEchHHhEECHHH
Confidence 000000000000 0 0111112223444555555421 1244566667776654 566533110
Q ss_pred -----------------cCCccHHHHHHcCCcEEEccCCCCCCCCCCH---H--------HHHHHHHHHhcccccccCCC
Q 012333 311 -----------------LGFAPIKEMLHADICVSLGTDGAPSNNRMSI---V--------DEMYLASLINKGREVFANGT 362 (466)
Q Consensus 311 -----------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~~~~ 362 (466)
....++++++..|+.++++||+.++....+. + .+......... .
T Consensus 267 ~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~tDh~p~~~~~k~~~~~~~p~g~~g~e~~~~~~~~~--------~ 338 (428)
T 3mpg_A 267 IPSADPNFKMNPPLRGKEDHEALIEGLLDGTIDMIATDHAPHTAEEKAQGIERAPFGITGFETAFPLLYTN--------L 338 (428)
T ss_dssp CCSSCGGGCCSSCCCCHHHHHHHHHHHHHTSSCCBCCCBCCCCTTGGGSCTTTSCSCCCCTTTHHHHHHHH--------T
T ss_pred HhCCCCeEEEeCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCCCHHHcccCHhhCCCCceehhhHHHHHHHH--------H
Confidence 0112466778889999999999876422110 0 00011111111 1
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCC-CCCC--CcCCcccceecccC--CCCeeEEEEc
Q 012333 363 TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS-WPMV--PVHDRITSLVYCMR--TENVVSVMCN 437 (466)
Q Consensus 363 ~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~-~~~~--~~~~~~~~~~~~~~--~~~v~~v~v~ 437 (466)
....++|++++++++|.+||+++|++ +|+|++|++|||||+|.+. |... ...+.....+|... ..+|..||++
T Consensus 339 ~~~~~~~~~~~~~~~t~~~a~~~g~~--~g~i~~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~t~v~ 416 (428)
T 3mpg_A 339 VKKGIITLEQLIQFLTEKPADTFGLE--AGRLKEGRTADITIIDLEQEEEIDPTTFLSKGKNTPFAGWKCQGWPVMTIVG 416 (428)
T ss_dssp TTTTSSCHHHHHHTTTHHHHHHHTCS--CSCCCTTSBCCEEEEESSCCEECCGGGCSSSCCCCSCTTCEECCEEEEEEET
T ss_pred HHcCCCCHHHHHHHHhHHHHHHhCCC--CccccCCCcCCEEEEcCCCCEEEchhhccccCCCCCcCCCEEeeEEEEEEEC
Confidence 12235999999999999999999994 8999999999999999883 3221 12222112222221 3579999999
Q ss_pred cEEEEECCeee
Q 012333 438 GQWVMKNKKIL 448 (466)
Q Consensus 438 G~~v~~~g~~~ 448 (466)
|++||++|+++
T Consensus 417 G~~v~~~g~~~ 427 (428)
T 3mpg_A 417 GKIAWQKESAL 427 (428)
T ss_dssp TEEEEECSCC-
T ss_pred CEEEEeCCccc
Confidence 99999999874
No 48
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=100.00 E-value=4.5e-34 Score=279.67 Aligned_cols=346 Identities=18% Similarity=0.188 Sum_probs=206.0
Q ss_pred CCCCCCCCCCcccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhh--h-----hhccCCCeEEeCCCcEE
Q 012333 6 SGGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--Q-----QFSQMADQIIDLQSQIL 78 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~--~-----~~~~~~~~~iD~~G~~v 78 (466)
++|++...+....+|++|+|++|++.. . +..++|+|+||||++|++..+.. . ....+++++||++|++|
T Consensus 54 ~~~~~~~~~~~~~~dllI~n~~vvd~~---g-~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v 129 (570)
T 4ubp_C 54 MGENGTYTRTENVLDLLLTNALILDYT---G-IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIV 129 (570)
T ss_dssp TTBCSSCCTTTTBCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEE
T ss_pred cCcCCCCCcccCCCCEEEECeEEECCC---C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEE
Confidence 444433322344689999999999632 2 36789999999999999864320 0 00123678999999999
Q ss_pred eecccccccCCcccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccC---------
Q 012333 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------- 149 (466)
Q Consensus 79 ~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~--------- 149 (466)
+|||||+|+|+.. +.. ...++.+||||+++.+...
T Consensus 130 ~PG~ID~HvH~~~----------------------------Pg~--------~~aAl~gGvTTvv~gg~~p~~~~n~~p~ 173 (570)
T 4ubp_C 130 TAGGIDTHVHFIN----------------------------PDQ--------VDVALANGITTLFGGGTGPAEGSKATTV 173 (570)
T ss_dssp EECEEEEEEECCC----------------------------TTH--------HHHHHHTTEEEEEEECCSSCHHHHHSSC
T ss_pred eeCEEEcccCCCC----------------------------cch--------HHHHHhcCCeEEEecCccccccCCCcCC
Confidence 9999999999821 111 1458899999999633210
Q ss_pred ------HHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHH
Q 012333 150 ------VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (466)
Q Consensus 150 ------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 223 (466)
...+.++.....++..+... +.. . ...+..+. .+.+...++. ...+..+++
T Consensus 174 ~~~~~~l~~~l~aa~~~~v~~~~~g~------~~~------~---~l~el~el----~~aGa~gfK~----~~~~~~~~~ 230 (570)
T 4ubp_C 174 TPGPWNIEKMLKSTEGLPINVGILGK------GHG------S---SIAPIMEQ----IDAGAAGLKI----HEDWGATPA 230 (570)
T ss_dssp CCHHHHHHHHHHHHTTCSSEEEEEEE------CCC------S---SHHHHHHH----HHHTCCEEEE----EGGGCCCHH
T ss_pred CCcHHHHHHHHHHhhhCCeeEEEEec------cCC------c---CHHHHHHH----HHcCCCeEee----ccCCCCCHH
Confidence 11122222222333222110 000 1 11222222 2223233333 233456889
Q ss_pred HHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCee---EEEeecC-ChhhHHHHHhcCCe
Q 012333 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLL---SAHTVWV-NHTEIGLLSRAGVK 299 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~H~~~~-~~~~~~~~~~~g~~ 299 (466)
.+.++++.+++++.++.+|+.+...... ..+.+..+. +.... +.|+... .++.++++.+.++.
T Consensus 231 ~L~~aL~~A~~~g~~V~iHae~l~e~g~-----------Vedalea~~--Gr~ih~~HiEgag~~hapd~i~~~~~~~vl 297 (570)
T 4ubp_C 231 SIDRSLTVADEADVQVAIHSDTLNEAGF-----------LEDTLRAIN--GRVIHSFHVEGAGGGHAPDIMAMAGHPNVL 297 (570)
T ss_dssp HHHHHHHHHHHHTCEEEEECCTTCSSCC-----------HHHHHHHHT--TCCEEETTTTSTTSSSTTTGGGGGGSTTEE
T ss_pred HHHHHHHHHHHcCCEEEEEcCCcchhhH-----------HHHHHHHhC--CCceeEEEecccccccChHHHHHhccCCcc
Confidence 9999999999999999999985322110 111222211 11111 1111111 24555555555554
Q ss_pred EEE-Cccc---h------------------------------hhccCCccHHHHHHcCCcEEEccCCCCCCCCCCHH-HH
Q 012333 300 VSH-CPAS---A------------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIV-DE 344 (466)
Q Consensus 300 ~~~-~p~~---~------------------------------~~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~-~~ 344 (466)
... +|.. . .+....++++.+++.|+.+++|||++..+...... ..
T Consensus 298 ps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~~a~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~~~~~ 377 (570)
T 4ubp_C 298 PSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRT 377 (570)
T ss_dssp EBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCHHHHH
T ss_pred ccccCCCCCcccchhHHhhhheeeecccCccccchhHHHHhhhhhhccccccchhhcCCEEEEECcccccCCcCcccCcH
Confidence 432 2220 0 01123457788999999999999998644222222 22
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceec
Q 012333 345 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVY 424 (466)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~ 424 (466)
...+......+..........+.++++++|+++|.|||+++|+++++|+|++||.|||||||.+.+.
T Consensus 378 ~~~a~~~~~~rg~l~~~~~~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~~~------------- 444 (570)
T 4ubp_C 378 WQTADKMKKQRGPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFFG------------- 444 (570)
T ss_dssp HHHHHHHHHHHCSCTTCCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGGTT-------------
T ss_pred HHHHHHHHHhcCCCCCccccccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECccccc-------------
Confidence 2222211111111111112346799999999999999999999988999999999999999988332
Q ss_pred ccCCCCeeEEEEccEEEEEC
Q 012333 425 CMRTENVVSVMCNGQWVMKN 444 (466)
Q Consensus 425 ~~~~~~v~~v~v~G~~v~~~ 444 (466)
.++..||++|++||+.
T Consensus 445 ----~~v~~t~~~G~~v~~~ 460 (570)
T 4ubp_C 445 ----VKADRVIKGGIIAYAQ 460 (570)
T ss_dssp ----TSCSEEEETTEEEEEE
T ss_pred ----CCeeEEEECCEEEEec
Confidence 4789999999999974
No 49
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=100.00 E-value=2.4e-33 Score=278.98 Aligned_cols=388 Identities=21% Similarity=0.188 Sum_probs=208.9
Q ss_pred CCCCCCCCcccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeeccccccc
Q 012333 8 GGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87 (466)
Q Consensus 8 ~~~~~~~~~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~ 87 (466)
-++-+++...+++++|+|++|+++++ ....+++|+|+||+|++|++... + .+.++||++|++|+|||||+|+
T Consensus 10 ~~~~~~~~~~~~~~~i~~~~v~~~~~--~~~~~~~v~i~~g~I~~i~~~~~-----~-~~~~~iD~~g~~v~PG~iD~H~ 81 (496)
T 1rk6_A 10 HGSMSQPDATPFDYILSGGTVIDGTN--APGRLADVGVRGDRIAAVGDLSA-----S-SARRRIDVAGKVVSPGFIDSHT 81 (496)
T ss_dssp ----------CBSEEEESSEECCSSS--CCCEECEEEEETTEEEEEECCTT-----S-CBSCEEECTTCEEEECEEESSC
T ss_pred cccccCCCCCcccEEEECCEEEeCCC--CceeccEEEEECCEEEEecCCCC-----C-CCCeEEeCCCCEEecCEeeeee
Confidence 35556666666789999999996543 34567899999999999987531 1 3567999999999999999999
Q ss_pred CCcccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc----c---------------
Q 012333 88 HTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----Q--------------- 148 (466)
Q Consensus 88 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~----~--------------- 148 (466)
|+.....+. .....++.+||||+++++. .
T Consensus 82 H~~~~~~~~--------------------------------~~~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i~~~~ 129 (496)
T 1rk6_A 82 HDDNYLLKH--------------------------------RDMTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLD 129 (496)
T ss_dssp CCTTHHHHC--------------------------------TTCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGC
T ss_pred cCCcccccc--------------------------------HHHHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhhcccC
Confidence 995432211 0123467889999887531 0
Q ss_pred --------CHHHHHHHHHHhCC--eEE--eecccccC-CCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeec
Q 012333 149 --------HVSEMAKAVELLGL--RAC--LVQSTMDC-GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIR 215 (466)
Q Consensus 149 --------~~~~~~~~~~~~g~--~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 215 (466)
......+.....+. ... .+...... ..+... .......+.+.+..+++..+.+...+.......
T Consensus 130 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~ 206 (496)
T 1rk6_A 130 EGGSFRFARFSDYLEALRAAPPAVNAACMVGHSTLRAAVMPDLR---REATADEIQAMQALADDALASGAIGISTGAFYP 206 (496)
T ss_dssp SSSCCEESSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSCCS---SCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSG
T ss_pred cccccCccCHHHHHHHHhccCCccceEEecccccceeeeccccc---cCCCHHHHHHHHHHHHHHHHcCCcEEeeccccC
Confidence 01112222222121 111 11110000 000000 011222334444555444333322222111111
Q ss_pred ccccCCHHHHHHHHHHHHHcCCccceeccCCcc-hhHH------HHhhcCCC----Cc----------h---HHHHhhhc
Q 012333 216 QIMNATDRLLLETRDMAREFKTGIHMHVAEIPY-ENQV------VMDTRKVD----HG----------T---VTFLDKIE 271 (466)
Q Consensus 216 ~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~------~~~~~~~~----~~----------~---~~~~~~~~ 271 (466)
.....+.+++.++++.+++++.++.+|+..... .... .....+.. +. . .+.+...+
T Consensus 207 ~~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~~~~~~l~~~~~~a~~~g~~v~i~H~~~~~~~~~g~~~~~~~~l~~a~ 286 (496)
T 1rk6_A 207 PAAHASTEEIIEVCRPLITHGGVYATHMRDEGEHIVQALEETFRIGRELDVPVVISHHKVMGKLNFGRSKETLALIEAAM 286 (496)
T ss_dssp GGTTCCHHHHHHHHTHHHHHTCEEEEECSCSSTTHHHHHHHHHHHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEEeCCCcccHHHHHHHHHHHHHHcCCeEEEEEEeccCCcchhhHHHHHHHHHHHH
Confidence 112345667777777788888888888853211 0000 00000100 00 0 11222211
Q ss_pred cCCCCe------eEEEeecCChhhHHHHHhcC-CeEEECccchhhc-----------cCCccHH---HHHHcCC------
Q 012333 272 FLQNNL------LSAHTVWVNHTEIGLLSRAG-VKVSHCPASAMRM-----------LGFAPIK---EMLHADI------ 324 (466)
Q Consensus 272 ~~~~~~------~~~H~~~~~~~~~~~~~~~g-~~~~~~p~~~~~~-----------~~~~~~~---~~~~~gi------ 324 (466)
..+ +. ...|+.+++ ++++++.+ +.+.+||. +... .+..++. ++++.|+
T Consensus 287 ~~g-~v~~~~~~~~~~~~~~~---~~~l~~~~~~~v~~~p~-~~~l~~~~l~~~~~~~g~~~~~~l~~~l~~G~i~~~~~ 361 (496)
T 1rk6_A 287 ASQ-DVSLDAYPYVAGSTMLK---QDRVLLAGRTLITWCKP-YPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMD 361 (496)
T ss_dssp HHS-CEEEEECSCSCEEEECC---CCTTTTSSCEEEEEESS-CGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCC
T ss_pred HcC-CeEEEEeccCCCCCccc---HHHhcCccceEEeccCC-CcccccCcHHHHHHHcCCCHHHHHHHHHhcCceeecCC
Confidence 111 11 122343333 23333342 55666663 2111 3344444 3556676
Q ss_pred -----------cEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccc
Q 012333 325 -----------CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393 (466)
Q Consensus 325 -----------~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~ 393 (466)
++++|||+.+.+....+...........+. ......+|++++++++|.|||++||++ ++|+
T Consensus 362 ~~~v~~~~~~~~~~iGTD~~~~~~~~~~~~~~~~~~~l~~~-------v~~~~~l~~~~~l~~~T~~~A~~lgl~-~~G~ 433 (496)
T 1rk6_A 362 EPDVQRILAFGPTMIGSDGLPHDERPHPRLWGTFPRVLGHY-------SRDLGLFPLETAVWKMTGLTAAKFGLA-ERGQ 433 (496)
T ss_dssp HHHHHHHHHSTTEEECCCCCTTCSSCCTHHHHHHHHHHCCC-------CCCTCSSCHHHHHHTTTHHHHHHHTCT-TCSS
T ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCchhhccHHHHHHHH-------HhhcCCCCHHHHHHHHHHHHHHHhCCC-CCCC
Confidence 689999997654221122221122222211 011234999999999999999999995 4899
Q ss_pred cccCCccCEEEEcCCCCCCCCc-CCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHH
Q 012333 394 LEAGKKADMVVVDPFSWPMVPV-HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQ 457 (466)
Q Consensus 394 i~~G~~ADlvv~d~~~~~~~~~-~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~ 457 (466)
|++|++|||||||.+.....+. .++.. ...+|..||++|++|+++|++++.+.|++++
T Consensus 434 i~~G~~ADlv~~d~~~~~~~~~~~~~~~------~~~~v~~v~v~G~~v~~~g~~~~~~~g~~l~ 492 (496)
T 1rk6_A 434 VQPGYYADLVVFDPATVADSATFEHPTE------RAAGIHSVYVNGAAVWEDQSFTGQHAGRVLN 492 (496)
T ss_dssp CCTTSBCCEEEECTTTCBCCCCSSSTTC------CCBSEEEEEETTEEEEETTEECSCCCCCBCC
T ss_pred cCCCCcccEEEEcCcccccccccccccc------cCCCceEEEECCEEEEECCeeccCCCceEee
Confidence 9999999999999985432221 12221 2357999999999999999999998888764
No 50
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=100.00 E-value=3.3e-33 Score=276.11 Aligned_cols=373 Identities=16% Similarity=0.126 Sum_probs=222.0
Q ss_pred cccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccc
Q 012333 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~ 95 (466)
.+++|++|+|++|++++ +.....++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+....++
T Consensus 4 ~~~~~~~i~~~~v~~~~--~~~~~~~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~v~PG~iD~H~H~~~~~~~ 75 (480)
T 3gip_A 4 AEKLDFKITGGWIIDGT--GAPRRRADLGVRDGRIAAIGELGA------HPARHAWDASGKIVAPGFIDVHGHDDLMFVE 75 (480)
T ss_dssp -CCEEEEEESSEECCSS--SCCCEECEEEEETTEEEEEECCTT------SCEEEEEECTTSEEEECEEESSCCCTTHHHH
T ss_pred cccCCEEEECcEEECCC--CCeeeeeEEEEECCEEEEecCCCC------CCCCeEEECCCCEEccCEEeccccccccccC
Confidence 35689999999999654 334567899999999999998532 1366899999999999999999998543222
Q ss_pred cccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeee---------cCc-----------------cC
Q 012333 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE---------AGG-----------------QH 149 (466)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~---------~~~-----------------~~ 149 (466)
. . .....+.+||||+++ ++. ..
T Consensus 76 ~-------------------~-------------~~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~ 123 (480)
T 3gip_A 76 K-------------------P-------------DLRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFAD 123 (480)
T ss_dssp S-------------------T-------------TCHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSS
T ss_pred C-------------------h-------------hHHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccC
Confidence 1 0 011248999999997 211 11
Q ss_pred HHHHHHHHHHhC--CeEEeeccc-----ccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCH
Q 012333 150 VSEMAKAVELLG--LRACLVQST-----MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD 222 (466)
Q Consensus 150 ~~~~~~~~~~~g--~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 222 (466)
.....+.....+ +........ ...+ . .......+.+.+..+.+++..+.+...++....+......+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g--~---~~~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~ 198 (480)
T 3gip_A 124 VPAYFAALDAQRPMINVAALVGHANLRLAAMR--D---PQAAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQA 198 (480)
T ss_dssp HHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCS--S---TTSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCH
T ss_pred HHHHHHHHHhCCCCceEEEccccHHHHHHhcC--C---cCCCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCCcccCCH
Confidence 333344444332 322221100 0001 0 011123445556666666555555455554433332334578
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC-------h---hhHHH
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-------H---TEIGL 292 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~-------~---~~~~~ 292 (466)
+++.++++.++++|.++.+|+.+....... ...+.+......+.+..+.|..... . +.++.
T Consensus 199 ~el~~~~~~a~~~g~~v~~H~~~~~~~~~~---------a~~e~i~la~~~g~~v~i~H~s~~~~~~~~~~~~~l~~i~~ 269 (480)
T 3gip_A 199 AELEGLARVAAERRRLHTSHIRNEADGVEA---------AVEEVLAIGRGTGCATVVSHHKCMMPQNWGRSRATLANIDR 269 (480)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSCSSTTHHH---------HHHHHHHHHHHHCCEEEETTCCCCSGGGTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEecCccccHHH---------HHHHHHHHHHHhCCCEEEEEEeccCccchhhHHHHHHHHHH
Confidence 888888899999999999999653221100 0112222222333444455554211 3 34555
Q ss_pred HHhcCCeE--EECccchhhc------------------------cC-----------CccHH------------------
Q 012333 293 LSRAGVKV--SHCPASAMRM------------------------LG-----------FAPIK------------------ 317 (466)
Q Consensus 293 ~~~~g~~~--~~~p~~~~~~------------------------~~-----------~~~~~------------------ 317 (466)
+++.|+.+ .++|+..... .+ ..+..
T Consensus 270 a~~~G~~Vt~e~~p~~~~~t~~~l~~~~~~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l~~g~i~~~~~~~ 349 (480)
T 3gip_A 270 AREQGVEVALDIYPYPGSSTILIPERAETIDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDED 349 (480)
T ss_dssp HHHTTCCEEEEECSCSCEEEECCGGGTTTSSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHCSEEEEECCCCHH
T ss_pred HHHcCCceEEEeeccccCcchhhhcCHHHHHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhccCCeEEEeCCHH
Confidence 66666554 4566543210 00 11111
Q ss_pred --HHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCC-CCCCCHHHHHHHHhHHHHHHcCCCCccccc
Q 012333 318 --EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTD-PAALPAETVLRMATINGAKSVLWDNDIGSL 394 (466)
Q Consensus 318 --~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ls~~~al~~~T~~~A~~lgl~~~~G~i 394 (466)
..+..+...++|||+.+......+...-.......+ +.. ...+|++++++++|.+||+++|+++ +|+|
T Consensus 350 ~~~~~~~~~~~~~gsD~~~~~~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~~~~t~~~a~~~g~~~-~G~l 420 (480)
T 3gip_A 350 EVKRIFQHPCCMVGSDGLPNDARPHPRLWGSFTRVLGR--------YVREARLMTLEQAVARMTALPARVFGFAE-RGVL 420 (480)
T ss_dssp HHHHHHHSTTEEECCCCCTTCSSCCTHHHHHHHHHHHC--------CCCCTCSSCHHHHHHHHTHHHHHHHTCTT-CSSC
T ss_pred HHHHHHcCCCeEEecCCcccCCCCChhhhhhHHHHHHH--------HhhhcCCCCHHHHHHHHHHHHHHHcCCCC-CCcc
Confidence 112334556788998765432211111111122221 112 2459999999999999999999954 6999
Q ss_pred ccCCccCEEEEcCCCCCCC-CcCCcccceecccCCCCeeEEEEccEEEEECCeeeeccHHHHHHH
Q 012333 395 EAGKKADMVVVDPFSWPMV-PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQL 458 (466)
Q Consensus 395 ~~G~~ADlvv~d~~~~~~~-~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~ 458 (466)
++|++|||||||++..... .+.++.. ...+|..||++|++||++|++++ ..|+++++
T Consensus 421 ~~G~~AD~vv~d~~~~~~~~~~~~~~~------~~~~v~~v~v~G~~v~~~g~~~~-~~G~~lr~ 478 (480)
T 3gip_A 421 QPGAWADVVVFDPDTVADRATWDEPTL------ASVGIAGVLVNGAEVFPQPPADG-RPGQVLRA 478 (480)
T ss_dssp STTSBCCEEEECTTTCBCCCCSSSTTC------CCBSEEEEEETTEEEESSCCSSS-CCCCBCCC
T ss_pred CCCCCCCEEEEcCccccCccccccccc------cCCCccEEEECCEEEEECCeEcC-CCCcCcCC
Confidence 9999999999999953211 1222211 13579999999999999999998 88887653
No 51
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=100.00 E-value=4e-34 Score=281.28 Aligned_cols=363 Identities=16% Similarity=0.183 Sum_probs=212.1
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcC--CchhhhhhccCCCeEEeCCCcEEeecccccccCCccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ--SADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~--~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~ 94 (466)
+++|++|+|++|+++++ . .+++|+|+||+|++|++ ..+ ..+.++||++|++|+|||||+|+|+....
T Consensus 4 ~~~~~~i~~~~v~~~~~--~--~~~~v~i~~g~I~~i~~~~~~~------~~~~~~id~~g~~v~PG~ID~H~H~~~~~- 72 (448)
T 3hm7_A 4 KRFDLIIRSSTVVTETT--T--YRADVAIRNGIVSAITEPGSIS------SDDGPAIDGTGLHLFPGMVDVHVHFNEPG- 72 (448)
T ss_dssp -CCSEEEEEEEEECSSC--E--EEEEEEEETTEEEEEESTTCSC------TTSSCEEECTTCEEEECEEEEEECCCTTT-
T ss_pred CcccEEEEeeEEECCCC--c--eEeEEEEECCEEEEeeCccCCC------CCCCeEEECCCCEEecCEEEeeeccCCCC-
Confidence 45789999999997543 2 67899999999999998 322 13678999999999999999999985311
Q ss_pred ccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecC-c-----cCHHHHHH---HHHHh-CCeE
Q 012333 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-G-----QHVSEMAK---AVELL-GLRA 164 (466)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~-~-----~~~~~~~~---~~~~~-g~~~ 164 (466)
....+.+ ....+.++.+|||++++++ . .....+.. ..... .+..
T Consensus 73 -----------------------~~~~~~~---~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (448)
T 3hm7_A 73 -----------------------RTEWEGF---ASGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDY 126 (448)
T ss_dssp -----------------------SGGGCCS---HHHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEE
T ss_pred -----------------------CCcHhHH---HHHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEE
Confidence 0000000 1123557899999999987 2 22233222 22222 2233
Q ss_pred EeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeeccc---ccCCHHHHHHHHHHHHHcCCccce
Q 012333 165 CLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI---MNATDRLLLETRDMAREFKTGIHM 241 (466)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~l~~~~~~a~~~~~~v~~ 241 (466)
...... .+. . ..+..+.. +.+...++.++..... ...+.+.+.++++.++++|.++.+
T Consensus 127 ~~~~~~-------~~~----~----~~~l~~l~----~~g~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~a~~~g~~v~v 187 (448)
T 3hm7_A 127 RFWGGL-------VPG----N----IDHLQDLH----DGGVIGFKAFMSECGTDDFQFSHDETLLKGMKKIAALGSILAV 187 (448)
T ss_dssp EEEEEC-------CTT----C----GGGHHHHH----HTTCSEEEEESSSCSSSSSCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEEEe-------ccc----C----HHHHHHHH----HcCCCEEEEeeccccCCccCcCCHHHHHHHHHHHHhcCCEEEE
Confidence 222111 110 0 11112222 2233344443333221 345788999999999999999999
Q ss_pred eccCCcchhHHHHhhc--C----------CCC-----chHHHHhhhccCCCCeeEEEeecC-ChhhHHHHHhcCCe--EE
Q 012333 242 HVAEIPYENQVVMDTR--K----------VDH-----GTVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VS 301 (466)
Q Consensus 242 H~~~~~~~~~~~~~~~--~----------~~~-----~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~--~~ 301 (466)
|+.+............ + ... .....+...+..+.+..+.|...- +-+.++.+++.|.. +.
T Consensus 188 H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~~i~H~s~~~~~~~i~~ak~~G~~v~~e 267 (448)
T 3hm7_A 188 HAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPIHICHVSSRKVLKRIKQAKGEGVNVSVE 267 (448)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEECCCCCHHHHHHHHHHHHTTCCEEEE
T ss_pred EeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHhcCCCEEEE
Confidence 9976432211000000 0 000 011122222223444555554321 12445666666654 55
Q ss_pred ECccchhhc--------------------cCCccHHHHHHcCCcEEEccCCCCCCCCCCH----HH--------HHHHHH
Q 012333 302 HCPASAMRM--------------------LGFAPIKEMLHADICVSLGTDGAPSNNRMSI----VD--------EMYLAS 349 (466)
Q Consensus 302 ~~p~~~~~~--------------------~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~----~~--------~~~~~~ 349 (466)
+||...... ....++++++..|+.++++||+.|.....+. .. +.....
T Consensus 268 ~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~~~~i~tD~~p~~~~~k~~~~~~~~~~G~~g~e~~l~~ 347 (448)
T 3hm7_A 268 TCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEIDLISSDHSPSLPQMKTGKTIFEVWGGIAGCQNTLAV 347 (448)
T ss_dssp ECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHHHTCCCEECCCBCCCCGGGGCCSSTTTSCCCBCCTTTHHHH
T ss_pred echHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHhcCCccEEEeCCCCCCHHHcccCCHhhCCCCCccHHHHHHH
Confidence 777533210 0123466778889999999998876421110 00 011112
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCC-------cCCcccc
Q 012333 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVP-------VHDRITS 421 (466)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~-------~~~~~~~ 421 (466)
+... .....++|++++++++|.|||+++|+++++|+|++|++|||||+|.+ +|...+ ..+|+..
T Consensus 348 ~~~~--------~~~~~~l~~~~~~~~~t~~~A~~~g~~~~~g~l~~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~sp~~g 419 (448)
T 3hm7_A 348 MLTE--------GYHKRKMPLTQIVQLLSTEPAKRFGLYPQKGTIQVGAEASFTLIDLNESYTLNASDLYYRHPISPYVG 419 (448)
T ss_dssp HHHH--------TTTTTCCCHHHHHHHHTHHHHHHHTCTTTSSCCSTTSBCCEEEEEEEEEEECCGGGCCSSSCCCTTTT
T ss_pred HHHH--------HHhcCCcCHHHHHHHHhHHHHHHcCCCCCCCcccCCCcCCEEEEeCCCCEEEChHhcccccCCCCCCC
Confidence 1211 11234699999999999999999999888999999999999999987 332211 1122221
Q ss_pred eecccCCCCeeEEEEccEEEEECCe
Q 012333 422 LVYCMRTENVVSVMCNGQWVMKNKK 446 (466)
Q Consensus 422 ~~~~~~~~~v~~v~v~G~~v~~~g~ 446 (466)
..+ ..+|..||++|++||++++
T Consensus 420 ~~~---~g~v~~t~~~G~~v~~~~~ 441 (448)
T 3hm7_A 420 QRF---RGKVKHTICQGKHVYQDHE 441 (448)
T ss_dssp CEE---EEEEEEEEETTEEEEECC-
T ss_pred CEE---EEEEEEEEECCEEEEECCC
Confidence 111 2489999999999999976
No 52
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=100.00 E-value=3.5e-33 Score=270.33 Aligned_cols=347 Identities=18% Similarity=0.196 Sum_probs=213.1
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCC-CcEEeecccccccCCccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQ-SQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~-G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
.++++|+|++|++++ . .+.+++|+|+||+|++|++.... . ++.++||++ |++|+|||||+|+|+....
T Consensus 2 ~~~~li~~~~v~~~~--~-~~~~~~v~I~~g~I~~ig~~~~~----~-~~~~viD~~~g~~v~PGlID~H~H~~~~~--- 70 (396)
T 2vhl_A 2 AESLLIKDIAIVTEN--E-VIKNGYVGINDGKISTVSTERPK----E-PYSKEIQAPADSVLLPGMIDIHIHGGYGA--- 70 (396)
T ss_dssp -CCEEEEEEEEECSS--C-EEEEEEEEEETTEEEEEESSCCS----S-CCSEEEECCTTCEEEECEEEEEECEETTE---
T ss_pred CccEEEEeeEEEcCC--c-cccCceEEEECCEEEEEECCCCC----C-CCCceEcCCCCCEEcCCEEEEeecCCcCc---
Confidence 457999999999754 2 45678999999999999832110 0 245899999 9999999999999985421
Q ss_pred ccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-CHHH-------HHHHHHH-h----CCe
Q 012333 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSE-------MAKAVEL-L----GLR 163 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-~~~~-------~~~~~~~-~----g~~ 163 (466)
++ ...++++. .....+++++||||+++++.. .... ..+.... . |..
T Consensus 71 -----~~------------~~~~~e~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~ 129 (396)
T 2vhl_A 71 -----DT------------MDASFSTL----DIMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAE 129 (396)
T ss_dssp -----EG------------GGCSHHHH----HHHHHHGGGGTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCSGGGSSSE
T ss_pred -----cc------------cCCCHHHH----HHHHHHHHcCCeeEEEecccCCCHHHHHHHHHHHHHHHhcccccccccc
Confidence 00 01122222 235677999999999998643 2221 1222222 2 321
Q ss_pred EEe---ecccccC-CCCCC-cccccCChHHHHHHHHHHHHHhccCCCCCeEEE-EeecccccCCHHHHHHHHHHHHHcCC
Q 012333 164 ACL---VQSTMDC-GEGLP-ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAREFKT 237 (466)
Q Consensus 164 ~~~---~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~l~~~~~~a~~~~~ 237 (466)
... ....... ..|.. ....... ..+.++++.+.+.+.++.. +.++... +.++++.++++|+
T Consensus 130 ~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~ik~~~~~p~~~~------~~~~~~~a~~~g~ 196 (396)
T 2vhl_A 130 LLGIHLEGPFVSPKRAGAQPKEWIRPS-------DVELFKKWQQEAGGLIKIVTLAPEEDQ------HFELIRHLKDESI 196 (396)
T ss_dssp EEEEEEECSSSCGGGCTTSCGGGCCCC-------CHHHHHHHHHHTTTCEEEEEECGGGSG------GGHHHHHHHHTTC
T ss_pred eEEEeeecCccCccccCCCCHHHccCC-------CHHHHHHHHHhcCCcceEEEECCCCCC------HHHHHHHHHHCCC
Confidence 211 1111100 00100 0000111 1222333333334556643 3332221 1256788899999
Q ss_pred ccce-eccCCcchhHHHHhhcCCCCchHHHH---------hhhccC-----CCCe---eEEEeecCChhhHHHHHhc-CC
Q 012333 238 GIHM-HVAEIPYENQVVMDTRKVDHGTVTFL---------DKIEFL-----QNNL---LSAHTVWVNHTEIGLLSRA-GV 298 (466)
Q Consensus 238 ~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-----~~~~---~~~H~~~~~~~~~~~~~~~-g~ 298 (466)
++++ |+.+........... +.. .+..+ ...+.+ ..+. ++.|+.+++++.++.+.+. +.
T Consensus 197 ~v~~gH~~~~~~~~~~a~~~-G~~--~i~H~~~~~~~~~~~~~G~~~~~~~~~~~~~e~~~h~~~l~~~~~~~~~~~~~~ 273 (396)
T 2vhl_A 197 IASMGHTDADSALLSDAAKA-GAS--HMTHLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLAAKLAFLAKGS 273 (396)
T ss_dssp EEEECSBCCCHHHHHHHHHT-TCC--EESSTTSSBCCCCSSSCHHHHHHHHCTTCEEEEECSSSSSCHHHHHHHHHHHCT
T ss_pred EEeecccCCCHHHHHHHHHc-CCC--EeEeCCccCcccccCCCCchhhhhcCCCcEEEEcCCccccCHHHHHHHHhhcCC
Confidence 9998 998765544443331 110 00000 000000 0122 6789999999999988877 65
Q ss_pred -eEEECccchhhccCC-------ccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 012333 299 -KVSHCPASAMRMLGF-------APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPA 370 (466)
Q Consensus 299 -~~~~~p~~~~~~~~~-------~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 370 (466)
.+..+|.+... .+. .++..+.+.| .+.+ +|....+...+++..++.+... . ++|+
T Consensus 274 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g-~~~~-~d~~~~g~~~~l~~~l~~~~~~--~------------~~~~ 336 (396)
T 2vhl_A 274 SKLILITDSMRA-KGLKDGVYEFGGQSVTVRGR-TALL-SDGTLAGSILKMNEGARHMREF--T------------NCSW 336 (396)
T ss_dssp TSEEEECCBCTT-TTSCSEEEEETTEEEEEETT-EEEC-TTSCBCSBCCCHHHHHHHHHHH--H------------CCCH
T ss_pred ccEEEECcChhh-cCCCCceEEECCeEEEEECC-EEEe-CCCcccccccCHHHHHHHHHHh--c------------CCCH
Confidence 47777765421 111 1233455677 6666 7765554556788888765421 1 3999
Q ss_pred HHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeee
Q 012333 371 ETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 449 (466)
Q Consensus 371 ~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 449 (466)
+++++++|.|||++||+++++|+|++|++|||||+|.+ .+|..||++|++||+++++..
T Consensus 337 ~~~l~~aT~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~--------------------~~v~~v~~~G~~v~~~~~~~~ 395 (396)
T 2vhl_A 337 TDIANITSENAAKQLGIFDRKGSVTVGKDADLVIVSSD--------------------CEVILTICRGNIAFISKEADQ 395 (396)
T ss_dssp HHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECTT--------------------CCEEEEEETTEEEEECSCCC-
T ss_pred HHHHHHHHHHHHHHhCCcCCCceeCCCCcCCEEEECCC--------------------CcEEEEEECCEEEEecccccc
Confidence 99999999999999999877999999999999999998 589999999999999998753
No 53
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.7e-32 Score=263.47 Aligned_cols=355 Identities=14% Similarity=0.134 Sum_probs=210.6
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|++ + ....+++|+|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~i~~~~v~~-~---~~~~~~~v~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~g~------ 66 (424)
T 3gri_A 2 KLIKNGKVLQ-N---GELQQADILIDGKVIKQIAPAIEP-----SNGVDIIDAKGHFVSPGFVDVHVHLREPGG------ 66 (424)
T ss_dssp EEEESCEEEE-T---TEEEECEEEEETTEEEEEESCCCC-----CSSCEEEECTTCEEEECEEEEEECCCTTTC------
T ss_pred EEEEeeEEEc-C---CCceeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEEeCeEEeeecCCCCCC------
Confidence 7899999997 2 255778999999999999986431 136789999999999999999999843110
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc--------CHHHHHHHHHHhCCeEEeeccccc
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTMD 172 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~ 172 (466)
...++ + ....+.++.+|||++++++.. ......+.....+...+.......
T Consensus 67 -----------------~~~~~-~---~~~~~~~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (424)
T 3gri_A 67 -----------------EYKET-I---ETGTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASIT 125 (424)
T ss_dssp -----------------TTTCC-H---HHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESB
T ss_pred -----------------CCHHH-H---HHHHHHHHhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCCceEEEEEEEe
Confidence 01111 1 123355789999999998642 123344455556664332222211
Q ss_pred CCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcch---
Q 012333 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE--- 249 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~--- 249 (466)
.+ ... ... .+ +.++.+.+ .+. +..+..+..+++.+.++++.++++|.++++|+.+....
T Consensus 126 ~~--~~~----~~l----~~----l~~l~~~G--~~~--~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~ 187 (424)
T 3gri_A 126 TR--QLG----KEL----VD----FPALVKEG--AFA--FTDDGVGVQTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGG 187 (424)
T ss_dssp GG--GCS----SSB----CC----HHHHHTTT--CCC--EEECSSCCCSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTC
T ss_pred cC--CCc----chH----HH----HHHHHhcC--cEE--EecCCcCcCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhh
Confidence 11 000 000 01 11222222 122 34556677889999999999999999999999764321
Q ss_pred ----hHHHHhhcCCCCc-hHH------HHhhhccCCCCeeEEEeecCC-hhhHHHHHhcCCe--EEECccchhhc-----
Q 012333 250 ----NQVVMDTRKVDHG-TVT------FLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVK--VSHCPASAMRM----- 310 (466)
Q Consensus 250 ----~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~g~~--~~~~p~~~~~~----- 310 (466)
..........+.. ..+ .+......+.+..+.|..... -+.++.+++.|+. +.+||+.....
T Consensus 188 ~~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~ 267 (424)
T 3gri_A 188 AMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIP 267 (424)
T ss_dssp CEESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCC
T ss_pred hhhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHh
Confidence 1111111000000 011 111222233445555553211 1345556666655 56777643210
Q ss_pred ------cC---------CccHHHHHHcCCcEEEccCCCCCCC---------------CCCHHHHHHHHHHHhcccccccC
Q 012333 311 ------LG---------FAPIKEMLHADICVSLGTDGAPSNN---------------RMSIVDEMYLASLINKGREVFAN 360 (466)
Q Consensus 311 ------~~---------~~~~~~~~~~gi~~~~gsD~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~ 360 (466)
.. ...+++++..|+.++++|||.|+.. .......+.....+
T Consensus 268 ~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~igtDhap~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~~--------- 338 (424)
T 3gri_A 268 GNNAIYKMNPPLRSTEDREALLEGLLDGTIDCIATDHAPHARDEKAQPMEKAPFGIVGSETAFPLLYTHFV--------- 338 (424)
T ss_dssp SSCGGGCCSSCCCCHHHHHHHHHHHHTTSSCEECCCBCCCCHHHHTSCTTTSCCCCCCTTTHHHHHHHHHT---------
T ss_pred CcCceEEEeCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccCCHhHCCCCCccccccHHHHHHHHH---------
Confidence 01 1245567888999999999977631 01111111111111
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCC-CCCCCC--c-----CCcccceecccCCCCee
Q 012333 361 GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVP--V-----HDRITSLVYCMRTENVV 432 (466)
Q Consensus 361 ~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-~~~~~~--~-----~~~~~~~~~~~~~~~v~ 432 (466)
...++|++++++++|.+||+++|+ ++|+|++|++|||||||.+ +|...+ . .+|+.... ...+|.
T Consensus 339 ---~~~~~~~~~~~~~~t~~~a~~~g~--~~g~l~~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~sp~~g~~---~~g~v~ 410 (424)
T 3gri_A 339 ---KNGDWTLQQLVDYLTIKPCETFNL--EYGTLKENGYADLTIIDLDSEQEIKGEDFLSKADNTPFIGYK---VYGNPI 410 (424)
T ss_dssp ---TTSSCCHHHHHHHHTHHHHHHTTC--SCSCCCTTSBCCEEEEESSCCEECCGGGCSSSCCCCTTTTCE---ESCEEE
T ss_pred ---HcCCCCHHHHHHHHhHHHHHHhCC--CCCcccCCCcCCEEEEcCCCCEEEchhhcccccCCCCcCCCE---EeeeEE
Confidence 223599999999999999999999 4799999999999999998 333221 1 11222111 135899
Q ss_pred EEEEccEEEEECCe
Q 012333 433 SVMCNGQWVMKNKK 446 (466)
Q Consensus 433 ~v~v~G~~v~~~g~ 446 (466)
.||++|++||++|+
T Consensus 411 ~t~~~G~~v~~~g~ 424 (424)
T 3gri_A 411 LTMVEGEVKFEGDK 424 (424)
T ss_dssp EEEETTEEEEEC--
T ss_pred EEEECCEEEEeCCC
Confidence 99999999999985
No 54
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=5.8e-33 Score=277.22 Aligned_cols=376 Identities=16% Similarity=0.157 Sum_probs=216.6
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
+++++|+|++|++.+. ..+++|+|+||+|++|++.... + .+.++||++|++|+|||||+|+|+.....
T Consensus 7 ~~~~lI~n~~vv~~~~----~~~~~V~I~dG~I~~Ig~~~~~----~-~~~~vIDa~G~~v~PGlID~H~H~~~~~~--- 74 (521)
T 2ftw_A 7 TGTILIKNGTVVNDDR----YFKSDVLVENGIIKEISKNIEP----K-EGIKVVDATDKLLLPGGIDTHTHFQLPFM--- 74 (521)
T ss_dssp CCCEEEESCEEECSSC----EEECEEEEETTEEEEEESCCCC----C-SSCCEEECTTCEEEECEEEEEECTTCEET---
T ss_pred cCCEEEECcEEECCCC----ceeeeEEEECCEEEEecCCCCC----C-CCCeEEECCCCEEecCEEeeecccCcCCC---
Confidence 4689999999996432 3468999999999999975321 1 25689999999999999999999954210
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc----cCHHHHHHHHHHhC-CeEEeeccccc
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLG-LRACLVQSTMD 172 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~----~~~~~~~~~~~~~g-~~~~~~~~~~~ 172 (466)
...+.++.+. ..+.++++|||++++++. .......+...... ...........
T Consensus 75 ------------------~~~~~e~~~~----~~~~a~~~G~Ttv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~ 132 (521)
T 2ftw_A 75 ------------------GTVSVDDFDI----GTQAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWADEKVNCDYSLHV 132 (521)
T ss_dssp ------------------TEECSSCHHH----HHHHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred ------------------CccCHHHHHH----HHHHHHhCCcceecCcCCCCCCcCHHHHHHHHHHHhhcCceeeEeeEE
Confidence 0011122211 235578899999998642 22222222221110 00100001110
Q ss_pred CCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHH
Q 012333 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 252 (466)
.. + . .......+..+++++ .+...++.+..++.....+++++.++++.|++++.++++|+.+.......
T Consensus 133 ~~---~-~----~~~~~~~~l~~l~~~---~G~~~~k~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~ 201 (521)
T 2ftw_A 133 AI---T-W----WSEQVSREMEILVKE---RGVNSFKCFMAYKNSFMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEG 201 (521)
T ss_dssp EC---C-S----CCHHHHHHHHHHHHH---SCCCEEEEESSCTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHH
T ss_pred ee---c-C----CChhHHHHHHHHHHh---CCCCEEEEEeccCCCcCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 00 0 0 112223333333322 34456666666666667899999999999999999999999643211111
Q ss_pred --HHhhcCCCCc---------hHHHH------hhhccCCCCeeEEEeecCCh----hhHHHHHhcCCeEEE--Cccchh-
Q 012333 253 --VMDTRKVDHG---------TVTFL------DKIEFLQNNLLSAHTVWVNH----TEIGLLSRAGVKVSH--CPASAM- 308 (466)
Q Consensus 253 --~~~~~~~~~~---------~~~~~------~~~~~~~~~~~~~H~~~~~~----~~~~~~~~~g~~~~~--~p~~~~- 308 (466)
.....|.... ..+.. ......+.+. |..+++. +.++.+++.|+.+.. +|....
T Consensus 202 ~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~---hi~h~ss~~~~~~i~~~r~~G~~v~~e~~~~~L~~ 278 (521)
T 2ftw_A 202 QKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSVCTPV---YIVHVQSIGAADVICKHRKEGVRVYGEPIAAGLGV 278 (521)
T ss_dssp HHHHHHTTCCSTHHHHHHSCTHHHHHHHHHHHHHHHHHTCCE---EECSCCCHHHHHHHHHHHHTTCCEEECCBHHHHHC
T ss_pred HHHHHHcCCCChhhccccCcHHHHHHHHHHHHHHHHHhCCCE---EEEecCcHHHHHHHHHHHHcCCeEEEEEcchhhcc
Confidence 1111111110 01111 1111122233 4444443 346677788887542 111110
Q ss_pred ----------h----ccCCcc----------HHHHHHcCCcEEEccCCCCCCCCCCHHHHH------------------H
Q 012333 309 ----------R----MLGFAP----------IKEMLHADICVSLGTDGAPSNNRMSIVDEM------------------Y 346 (466)
Q Consensus 309 ----------~----~~~~~~----------~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~------------------~ 346 (466)
. ....+| +++++..|...+++||+.++. +.... +
T Consensus 279 d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~g~~~~~gsD~~~~~----~~~k~~~~~~~~~~p~G~~G~e~~ 354 (521)
T 2ftw_A 279 DGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDNCTFC----ADQKAMGKDDFTKIPNGVNGVEDR 354 (521)
T ss_dssp CGGGGGCSSHHHHHTTCCSSCCCCCTTHHHHHHHHHHHTSSCCCBCCBCCCC----HHHHGGGTTCGGGSCCCBCCTTTH
T ss_pred CHHHhcCCCcccCcceEEcCCCCCChhhHHHHHHHhcCCCEEEEEeCCCCCC----HHHhhcccCChhhCCCCCccHHHH
Confidence 0 001122 344788999999999987652 11000 0
Q ss_pred HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCC-CCCCC-------cCCc
Q 012333 347 LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS-WPMVP-------VHDR 418 (466)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~-~~~~~-------~~~~ 418 (466)
+...... .....++|++++++++|.|||+++|+++++|+|++|++|||||||++. ++..+ ..+|
T Consensus 355 l~~~~~~--------~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~i~~G~~ADlvv~d~~~~~~i~~~~~~~~~~~~p 426 (521)
T 2ftw_A 355 MSIVWEN--------GVNTGKLTWCQFVRATSSERARIFNIYPRKGRIDVGCDGDIVIWDPNQSKTISKDTHHHAVDFNI 426 (521)
T ss_dssp HHHHHHH--------HTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEEEEEEEECCTTTCCCSSSCCT
T ss_pred HHHHHHH--------HHhcCCCCHHHHHHHhChhHHHHhCCCCCCCCcCCCCcCCEEEEeCCCCEEEChHHccccCCCCC
Confidence 0000000 012235999999999999999999998889999999999999999983 21111 1222
Q ss_pred ccceecccCCCCeeEEEEccEEEEECCeee-eccHHHHH
Q 012333 419 ITSLVYCMRTENVVSVMCNGQWVMKNKKIL-LLMRGRLF 456 (466)
Q Consensus 419 ~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~-~~~~~~~~ 456 (466)
+..+.. ...|..||++|++||++|++. ....|+++
T Consensus 427 ~~g~~~---~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~ 462 (521)
T 2ftw_A 427 FEGIKV---TGIAVTTIVAGNIVWSDNKLSCVKGSGRFV 462 (521)
T ss_dssp TTTCEE---EEEEEEEEETTEEEEETTEECCCTTCCCBC
T ss_pred cCCCEe---eeeEEEEEECCEEEEECCeecccCcCceEe
Confidence 222211 246899999999999999987 34445554
No 55
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=100.00 E-value=7.8e-33 Score=266.65 Aligned_cols=355 Identities=19% Similarity=0.194 Sum_probs=198.4
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
.+|+|++|+++.. +.++++++|+|+||||++|++..+. ..+++++||++|++|+|||||+|+|+......+....
T Consensus 4 ~aI~narviD~~~-g~~i~~~~V~I~dG~I~~Ig~~~~~----~~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 78 (403)
T 3mtw_A 4 KAVSAARLLDVAS-GKYVDNPLVIVTDGRITSIGKKGDA----VPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNS 78 (403)
T ss_dssp EEEEEEEEEETTT-TEEEESEEEEEETTEEEEEEETTCC----CCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGGG
T ss_pred EEEEceEEEECCC-CcEecCcEEEEECCEEEEEeCCCCC----CCCCCEEEECCCCEEEeChheeeeCCccccccCcccc
Confidence 6899999997543 5678999999999999999986542 1247799999999999999999999865432221111
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHH-hC----CeEEeecccc--cC
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL-LG----LRACLVQSTM--DC 173 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~-~g----~~~~~~~~~~--~~ 173 (466)
...................+..++++..+.+............. .. .......... ..
T Consensus 79 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (403)
T 3mtw_A 79 ---------------LEYSDRFWSVVQTANAKKTLEAGFTTVRNVGAADYDDVGLREAIDAGYVPGPRIVTAAISFGATG 143 (403)
T ss_dssp ---------------GGSCHHHHHHHHHHHHHHHHHTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEECCSCEESTT
T ss_pred ---------------ccccHHHHhhhhhhhhhhccccccceeeccccccccchhhhhhhhcccccccccccccccccccc
Confidence 01111111222223445567889999888765443332222111 11 1111100000 00
Q ss_pred CCC----CCcccc--cCChHHHHHHHHHHHHHhccCCCCCeEEEE--------eecccccCCHHHHHHHHHHHHHcCCcc
Q 012333 174 GEG----LPASWA--VRTTDDCIQSQKELYAKHHHAADGRIRIWF--------GIRQIMNATDRLLLETRDMAREFKTGI 239 (466)
Q Consensus 174 ~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~l~~~~~~a~~~~~~v 239 (466)
... ...... .........+...........+........ ..........+.+.++++.++..+.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 223 (403)
T 3mtw_A 144 GHCDSTFFPPSMDQKNPFNSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKV 223 (403)
T ss_dssp STTSCCSSCGGGCCCCTTCCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEE
T ss_pred ccccccccccccccccccccchhHHHhhhhHhhhhhcchhhhhhhccccccccccccccccCHHHHHHHHHHHHHcCCeE
Confidence 000 000000 000000111112222222222212121111 112233456788999999999999999
Q ss_pred ceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECcc--------------
Q 012333 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPA-------------- 305 (466)
Q Consensus 240 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~-------------- 305 (466)
.+|.............. . ....+......................+.
T Consensus 224 ~~~~~~~~~~~~~~~~~------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (403)
T 3mtw_A 224 AAHAHGASGIREAVRAG------------------V-DTIEHASLVDDEGIKLAVQKGAYFSMDIYNTDYTQAEGKKNGV 284 (403)
T ss_dssp EEEECSHHHHHHHHHTT------------------C-SEEEECTTCCHHHHHHHHHHTCEEECCCSTHHHHHHHHHHHTC
T ss_pred EEEeccchhHHHHHHhc------------------c-cccccccccccchhhhhccccceeeeeeccchhhhhhhhcccc
Confidence 99986543222111110 0 01112222222222222222222221111
Q ss_pred -------chhhc-cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 012333 306 -------SAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377 (466)
Q Consensus 306 -------~~~~~-~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~ 377 (466)
..... ....+.+.+.+.|+.+.+|||++... ...++..+... .. .++|++++|+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gt~~~~~~-~~~~~~~~~~~--~~-------------~gls~~eal~~~ 348 (403)
T 3mtw_A 285 LEDNLRKDRDIGELQRENFRKALKAGVKMVYGTDAGIYP-HGDNAKQFAVM--VR-------------YGATPLQAIQSA 348 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCBTTBC-TTCGGGHHHHH--HH-------------TTCCHHHHHHHT
T ss_pred chhhccccccccccccchhhHHHhcCCeEeeccCCcccc-cchHHHHHHHH--HH-------------cCCCHHHHHHHH
Confidence 11110 22345677889999999999987543 22444444332 11 259999999999
Q ss_pred hHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEE
Q 012333 378 TINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 442 (466)
Q Consensus 378 T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 442 (466)
|.|||+++|+++++|+|++||+|||||||.| |++++ ..+ .+|..||++||+|.
T Consensus 349 T~npA~~lgl~~~~GsI~~G~~ADlvvld~d-----Pl~di-~~~------~~v~~Vi~~G~vvk 401 (403)
T 3mtw_A 349 TLTAAEALGRSKDVGQVAVGRYGDMIAVAGD-----PLADV-TTL------EKPVFVMKGGAVVK 401 (403)
T ss_dssp THHHHHHHTCTTTSSSCCTTSBCCEEEESSC-----TTTCG-GGG------GSCSEEEETTEEEE
T ss_pred HHHHHHHhCCCCCceeeCCCCcceEEEECCC-----hhHhH-hhh------cCcCEEEECCEEEe
Confidence 9999999999988999999999999999999 55542 211 47999999999764
No 56
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-32 Score=274.05 Aligned_cols=382 Identities=16% Similarity=0.161 Sum_probs=214.5
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~ 97 (466)
+++++|+|++|++.+. ..+++|+|+||+|++|++..+.+... ..+.++||++|++|+|||||+|+|+......
T Consensus 26 ~~~~lI~ng~Vv~~~~----~~~~dV~I~dGrI~~Ig~~~~~~~~~-~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~~-- 98 (541)
T 2vr2_A 26 PSRLLIRGGRVVNDDF----SEVADVLVEDGVVRALGHDLLPPGGA-PAGLRVLDAAGKLVLPGGIDTHTHMQFPFMG-- 98 (541)
T ss_dssp -CEEEEESCEEECSSC----EEECEEEEETTEEEEEEC------------CEEEECTTSEEEECEEEEEECTTCBCSS--
T ss_pred cCCEEEECcEEEcCCC----ceEeeEEEECCEEEEeccCCCCCccc-ccCceEEECCCCEEccCEEEecccCCCCCCC--
Confidence 4789999999997432 24679999999999999754321100 0123799999999999999999998542110
Q ss_pred cCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc----CHHHHHHHHHHhCC-eEEeeccccc
Q 012333 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGL-RACLVQSTMD 172 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~----~~~~~~~~~~~~g~-~~~~~~~~~~ 172 (466)
....++.+ ...+.++++||||++++... ......+....... ..........
T Consensus 99 -------------------~~~~e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~ 155 (541)
T 2vr2_A 99 -------------------SRSIDDFH----QGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADPKVCCDYSLHV 155 (541)
T ss_dssp -------------------SBCSCCTT----HHHHHHHTTTEEEEEEEECCCTTCCHHHHHHHHHHHHTTTCSSEEEEEE
T ss_pred -------------------CcCHHHHH----HHHHHHHhCCeeeeccccCCCCCCCHHHHHHHHHHHhccCceEEEeeee
Confidence 00111111 12245789999999986422 22222222222110 0000000000
Q ss_pred CCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHH
Q 012333 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 252 (466)
.. + ........+..++++ ..+...++.+..++..+.++++++.++++.+++++.++++|+.+.......
T Consensus 156 ~~----~----~~~~~~~~el~~l~~---~~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~ 224 (541)
T 2vr2_A 156 AV----T----WWSDQVKEEMKILVQ---DKGVNSFKMFMAYKDLYMVTDLELYEAFSRCKEIGAIAQVHAENGDLIAEG 224 (541)
T ss_dssp EE----C----SCSHHHHHHHHHHHH---TSCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHH
T ss_pred cc----c----CCCHHHHHHHHHHHH---hCCCCEEEEEeccCCccCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 00 0 011223333333332 234556777666666677899999999999999999999999543211111
Q ss_pred --HHhhcCCCCc---------hHHHHh------hhccCCCCeeEEEeec-CChhhHHHHHhcCCeEEECccchhhc----
Q 012333 253 --VMDTRKVDHG---------TVTFLD------KIEFLQNNLLSAHTVW-VNHTEIGLLSRAGVKVSHCPASAMRM---- 310 (466)
Q Consensus 253 --~~~~~~~~~~---------~~~~~~------~~~~~~~~~~~~H~~~-~~~~~~~~~~~~g~~~~~~p~~~~~~---- 310 (466)
.....+.... ..+... .....+....+.|... ...+.++.+++.|..+.. +.....+
T Consensus 225 ~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~~~~h~ss~~~~~~i~~ar~~G~~v~~-e~~~~~L~~d~ 303 (541)
T 2vr2_A 225 AKKMLALGITGPEGHELCRPEAVEAEATLRAITIASAVNCPLYIVHVMSKSAAKVIADARRDGKVVYG-EPIAASLGTDG 303 (541)
T ss_dssp HHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEEEEECCHHHHHHHHHHHHTTCCEEE-EEBHHHHHCCS
T ss_pred HHHHHHcCCCChhhccccchhHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHcCCeEEE-EeehhhhcCCH
Confidence 1111121110 011110 1112223344444421 112334556778876532 2211100
Q ss_pred --------------cCCcc----------HHHHHHcCCcEEEccCCCCCCCCCCHHHH------------------HHHH
Q 012333 311 --------------LGFAP----------IKEMLHADICVSLGTDGAPSNNRMSIVDE------------------MYLA 348 (466)
Q Consensus 311 --------------~~~~~----------~~~~~~~gi~~~~gsD~~~~~~~~~~~~~------------------~~~~ 348 (466)
...+| +++++..|+..+++||+.++. +... .++.
T Consensus 304 ~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~g~~~~~gtD~~~~~----~~~k~~~~~~~~~~p~G~~G~e~~l~ 379 (541)
T 2vr2_A 304 THYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTTTGTDNCTFN----TCQKALGKDDFTKIPNGVNGVEDRMS 379 (541)
T ss_dssp GGGGCSSHHHHHTTCCSSCCCSCTTHHHHHHHHHHTTSSCCCBCCBCCCC----HHHHGGGSSCGGGSCCCBCCTTTHHH
T ss_pred HHhcCccccccCceEECCCCCCCcchHHHHHHHHhcCCeEEEEeCCCCCC----hHHhcccCCChhhCCCCCccHHHHHH
Confidence 01122 455789999999999997653 1110 0111
Q ss_pred HHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCC--------CcCCccc
Q 012333 349 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV--------PVHDRIT 420 (466)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~--------~~~~~~~ 420 (466)
...... ....++|++++++++|.|||+++|+++++|+|++|++|||||||.+..... ...+|+.
T Consensus 380 ~~~~~~--------v~~~~l~~~~~~~~~T~~pA~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~p~~ 451 (541)
T 2vr2_A 380 VIWEKG--------VHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPKGTRTISAKTHHQAVNFNIFE 451 (541)
T ss_dssp HHHHHH--------TTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEEEEEEEECCTTTCSSSCSCCTTT
T ss_pred HHHHHH--------HHcCCCCHHHHHHHHhHHHHHHhCCCCCCCccCCCCCCCEEEEcCCcCeEeCHHHhhcccCCCccC
Confidence 111100 122359999999999999999999987899999999999999998732111 1123333
Q ss_pred ceecccCCCCeeEEEEccEEEEECCeeee-ccHHHHH
Q 012333 421 SLVYCMRTENVVSVMCNGQWVMKNKKILL-LMRGRLF 456 (466)
Q Consensus 421 ~~~~~~~~~~v~~v~v~G~~v~~~g~~~~-~~~~~~~ 456 (466)
.+.+. .+|..||++|++||++|+++. ...|+++
T Consensus 452 g~~~~---g~v~~v~v~G~~v~~~g~~~~~~~~G~~~ 485 (541)
T 2vr2_A 452 GMVCH---GVPLVTISRGKVVYEAGVFSVTAGDGKFI 485 (541)
T ss_dssp TCEEE---EEEEEEEETTEEEEETTEECCCTTCSCBC
T ss_pred CCEEe---eeEEEEEECCEEEEECCeeccCCCCceEe
Confidence 33222 368999999999999999874 3445444
No 57
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=100.00 E-value=4.3e-33 Score=286.19 Aligned_cols=347 Identities=16% Similarity=0.173 Sum_probs=188.1
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhh-------hhhccCCCeEEeCCCcEEeecccccccCC
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL-------QQFSQMADQIIDLQSQILLPGFVNTHVHT 89 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~-------~~~~~~~~~~iD~~G~~v~PG~ID~H~H~ 89 (466)
+..|++|+|++|++.+ + +.++||.|+||||++||+...+. ....++++++||++|++|+|||||+|+|+
T Consensus 335 ~~~DLVItNA~IVD~t--G--i~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiVtPGfID~HvHl 410 (840)
T 4gy7_A 335 ISLDTVITNAVIIDYT--G--IIKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHY 410 (840)
T ss_dssp GSCSEEEEEEEEEETT--E--EEEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEEEECEEEEEEEC
T ss_pred ccCCEEEeCeEEECCC--C--eEEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEEccCeeeeccCC
Confidence 3579999999999643 2 35789999999999999753210 11122478999999999999999999998
Q ss_pred cccccccccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCH------------HHHHHHH
Q 012333 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV------------SEMAKAV 157 (466)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~------------~~~~~~~ 157 (466)
.. + .. ....+.+|+||+.+.+.... .......
T Consensus 411 ~~----------------------------P-~~-------~~eALasGVTTvv~gGtgp~~~~~~~~~~~~~~~~~~~l 454 (840)
T 4gy7_A 411 IC----------------------------P-QL-------VYEAISSGITTLVGGGTGPAAGTRATTCTPSPTQMRLML 454 (840)
T ss_dssp CC----------------------------T-HH-------HHHHHHHTEEEEEEECSSSCHHHHHSSCCCSHHHHHHHH
T ss_pred CC----------------------------C-Cc-------hHHHHHhhHHHHHhCCCceecCcccccccchHHHHHHHH
Confidence 32 1 11 12356789999987653211 1111111
Q ss_pred HH---hCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHH
Q 012333 158 EL---LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE 234 (466)
Q Consensus 158 ~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~ 234 (466)
.. ..++..... .+. ....+. ..+. ...+...++ ....+..+++.+.++++.+++
T Consensus 455 ~a~~~~~vn~g~~~----~~~--------~~~~~~---L~el----~~aGa~g~K----~~~~~~~t~~~i~~aL~~A~e 511 (840)
T 4gy7_A 455 QSTDDLPLNFGFTG----KGS--------SSKPDE---LHEI----IKAGAMGLK----LHEDWGSTPAAIDNCLTIAEH 511 (840)
T ss_dssp HHTTTSSSEEEEEE----ECC--------CSSSHH---HHHH----HHHTCSEEE----EETTTCCCHHHHHHHHHHHHH
T ss_pred hhhhcceeEEEEeC----CCC--------cccHHH---HHHh----hhceeeEEE----eccccCCCHHHHHHHHHHHHH
Confidence 11 112211110 000 011111 1122 222222233 233445678889999999999
Q ss_pred cCCccceeccCCcchh---HHHHhhcCCC-C-------chHHHHhhhccCCCCeeEEEeecCC--------hhhHHHHHh
Q 012333 235 FKTGIHMHVAEIPYEN---QVVMDTRKVD-H-------GTVTFLDKIEFLQNNLLSAHTVWVN--------HTEIGLLSR 295 (466)
Q Consensus 235 ~~~~v~~H~~~~~~~~---~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~H~~~~~--------~~~~~~~~~ 295 (466)
++..+.+|........ .......+.. + .................+.+..... .+.+.....
T Consensus 512 ~g~~V~ih~e~~~~~~~vee~laA~~g~~~h~~~~e~~~~~~A~dii~~~~~a~~l~~~t~~~~~~~~~~~~e~l~~~~~ 591 (840)
T 4gy7_A 512 HDIQINIHTDTLNEAGFVEHSIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGIKNVLPSSTNPTRPLTSNTIDEHLDMLMV 591 (840)
T ss_dssp HTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSCSTTTGGGGGGCTTEEEEEESTTSSCBTTHHHHHHHHHHH
T ss_pred hCCEEEEeccCcchhHHHHHHHHhhcCCcccceeccccccccchHHHHHhhcccceeeEeeccchhhhhhhhhhheeEEe
Confidence 9999999986532211 1111110000 0 0000000111111111111111111 011111110
Q ss_pred cCCeEEECccchh----hc--cCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHH-HHHHHHHhcccccccCCCCCCCCC
Q 012333 296 AGVKVSHCPASAM----RM--LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDE-MYLASLINKGREVFANGTTDPAAL 368 (466)
Q Consensus 296 ~g~~~~~~p~~~~----~~--~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 368 (466)
....-...+.... +. ........+.+.|+..+++||+.+.......... ...+..................++
T Consensus 592 ~~~l~~~i~ed~~~~~s~~~~~~~a~~~ll~dlGvi~~isSD~~p~~~~~e~~~~~~~~a~~~~~~~g~~~~e~~~~~~L 671 (840)
T 4gy7_A 592 CHHLDREIPEDLAFAHSRIRKKTIAAEDVLNDIGAISIISSDSQAMGRVGEVISRTWQTADKMKAQTGPLKCDSSDNDNF 671 (840)
T ss_dssp HTTCCTTSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCEEECCBTTTBCGGGHHHHHHHHHHHHHHHHCSCTTSCSSCCHH
T ss_pred eeccCccchhhhhhccCcCCccchhHHHHHHhCCCeEEEeccccccccccccchhhhcccccchhhcccchhhhhhcCCC
Confidence 0000000000000 00 1112334466789999999999876543322221 222221211122222222334569
Q ss_pred CHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEE
Q 012333 369 PAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 443 (466)
Q Consensus 369 s~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 443 (466)
+++++|+++|.|||++||+++++|+|++||+|||||||+..| ..++..|+++|++||-
T Consensus 672 sl~eAIr~aTiNPAraLGLddr~GSIEpGK~ADLVLfDPa~F-----------------GvKPe~Vik~G~Iv~~ 729 (840)
T 4gy7_A 672 RIRRYIAKYTINPAIANGFSQYVGSVEVGKLADLVMWKPSFF-----------------GTKPEMVIKGGMVAWA 729 (840)
T ss_dssp HHHHHHHTTTHHHHHHHTCTTTSSSSCTTSBCCEEEECGGGT-----------------TTCCSEEEETTEEEEE
T ss_pred CHHHHHHHHHHHHHHHhCCCCCccccCCCCcceEEEECchHc-----------------CCCCeEEEECCEEEEc
Confidence 999999999999999999999999999999999999998733 2589999999999985
No 58
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=99.98 E-value=8e-31 Score=263.74 Aligned_cols=331 Identities=21% Similarity=0.242 Sum_probs=201.2
Q ss_pred cccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccc
Q 012333 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (466)
Q Consensus 16 ~~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~ 95 (466)
.+++|++|+|++|+++.. ..+..++|+|++|+|++|++... ..++.++||++|++|+|||||+|+|+...
T Consensus 32 ~~~~dlli~n~~ivd~~~--~~~~~~dI~I~~G~I~~Vg~~~~-----~~~~~~vID~~G~~v~PG~ID~H~Hl~~~--- 101 (608)
T 3nqb_A 32 DQRFDVLITGGTLVDVVT--GELRPADIGIVGALIASVHEPAS-----RRDAAQVIDAGGAYVSPGLIDTHMHIESS--- 101 (608)
T ss_dssp SSCEEEEEESCEEECTTT--CCEEECEEEEETTEEEEEECTTS-----CCCEEEEEECTTSEEEECEEEEEECGGGG---
T ss_pred CCCCCEEEECeEEEECCC--CeEEeeEEEEECCEEEEecCCCC-----CCCCCeEEeCCCCEEecCeEecccCcccc---
Confidence 456899999999996542 33456799999999999998542 11366899999999999999999999421
Q ss_pred cccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc--------CHHHHHHHHHHhCCeEEee
Q 012333 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLV 167 (466)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~--------~~~~~~~~~~~~g~~~~~~ 167 (466)
..+ .+. ..+.++.+|||++++++.. ......+.....+.+.+..
T Consensus 102 ---------------------~~~-~~~------~~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~ 153 (608)
T 3nqb_A 102 ---------------------MIT-PAA------YAAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILL 153 (608)
T ss_dssp ---------------------TSC-HHH------HHHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEE
T ss_pred ---------------------cCC-HHH------HHHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEe
Confidence 111 121 2355789999999975422 1122233333455666554
Q ss_pred cc-cccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCC
Q 012333 168 QS-TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (466)
Q Consensus 168 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 246 (466)
.. ....+.++...... ...++..+.++ ..+-..++.+...... ...++.+.+.++.|++.+.++.+|+.+.
T Consensus 154 ~p~~~P~~~~~~~~g~~----~~~~el~~l~~---~~~v~glgE~~~~~~v-~~~d~~l~~~l~~A~~~g~pV~~Ha~~~ 225 (608)
T 3nqb_A 154 APSCVPSAPGLERGGAD----FDAAILADLLS---WPEIGGIAEIMNMRGV-IERDPRMSGIVQAGLAAEKLVCGHARGL 225 (608)
T ss_dssp ECCCSSSSTTSCCCSCC----CCHHHHHHHHT---STTEEEEEEECCHHHH-HTTCHHHHHHHHHHHHHTCEEEECCTTC
T ss_pred ccccCCCCCccccCccc----CCHHHHHHHHh---ccCcceeeEeeccCCc-CCCcHHHHHHHHHHHHcCCEEEEcCCCC
Confidence 32 11110111110000 01122222221 1111111111111111 2345678888999999999999998753
Q ss_pred cchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccchhhccCCccHHHHHH----c
Q 012333 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLH----A 322 (466)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~----~ 322 (466)
... ....+...+ ....|+....++.++.+ +.|..+.+. .+... ....+..+++ .
T Consensus 226 ~~~-------------~L~~~~~aG-----v~~~H~~~~~eea~e~l-~~G~~i~i~-gs~~~--~~~~l~~~i~~~~~~ 283 (608)
T 3nqb_A 226 KNA-------------DLNAFMAAG-----VSSDHELVSGEDLMAKL-RAGLTIELR-GSHDH--LLPEFVAALNTLGHL 283 (608)
T ss_dssp CHH-------------HHHHHHHTT-----CCEECCCCSHHHHHHHH-HTTCEEEEE-SSSGG--GHHHHHHHHHHHTSC
T ss_pred CHH-------------HHHHHHHcC-----CCeeeccCCHHHHHHHH-HCCCEEEEe-ccccc--cHHHHHHHHHhHhhc
Confidence 221 111112211 22468777655555555 578888765 22211 1122333333 7
Q ss_pred CCcEEEccCCCCCCC---CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCc
Q 012333 323 DICVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399 (466)
Q Consensus 323 gi~~~~gsD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ 399 (466)
|++++++||+..... ...+...++... . .+++++++++++|.|||+++|+ +++|+|++|++
T Consensus 284 g~~v~lgTD~~~p~~~~~~g~l~~~v~~~~--~-------------~Gls~~eal~~aT~n~A~~lgl-~~~G~i~~G~~ 347 (608)
T 3nqb_A 284 PQTVTLCTDDVFPDDLLQGGGLDDVVRRLV--R-------------YGLKPEWALRAATLNAAQRLGR-SDLGLIAAGRR 347 (608)
T ss_dssp CTTEEEECBSCCHHHHHHTCSHHHHHHHHH--H-------------TTCCHHHHHHHHTHHHHHHHTC-TTSSCCSTTSB
T ss_pred CceEEEecCCCCCcchhhhcchHHHHHHHH--H-------------cCCCHHHHHHHHHHHHHHHcCC-CCCcCcCCCCC
Confidence 999999999742110 011222222221 1 1499999999999999999999 46899999999
Q ss_pred cCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeee
Q 012333 400 ADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 448 (466)
Q Consensus 400 ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 448 (466)
||||++|.- ...+|..||++|++|+++|+++
T Consensus 348 ADlvv~d~l------------------~~~~v~~v~~~G~~v~~~g~~~ 378 (608)
T 3nqb_A 348 ADIVVFEDL------------------NGFSARHVLASGRAVAEGGRML 378 (608)
T ss_dssp CCEEEESCT------------------TTCCEEEEEETTEEEEETTEEC
T ss_pred ccEEEECCC------------------CCCcceEEEECCEEEEECCeEe
Confidence 999999962 1248999999999999999876
No 59
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.98 E-value=1e-30 Score=253.27 Aligned_cols=360 Identities=18% Similarity=0.230 Sum_probs=190.8
Q ss_pred ccceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccc
Q 012333 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (466)
Q Consensus 17 ~~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 96 (466)
+|.+++|+|++|+|+++ ..++++++|+|+||||++|++.... .+++++||++|++|+|||||+|+|+.......
T Consensus 2 sM~~lli~ng~i~d~~~-~~~~~~~dV~I~~G~I~~Ig~~~~~-----~~~~~vID~~G~~v~PGfID~H~H~~~~~~~~ 75 (426)
T 3mkv_A 2 SLTTFLFRNGALLDPDH-PDLLQGFEILIEDGFIREVSDKPIK-----SSNAHVIDVKGKTIMPGLIDLHVHVVAIEFNL 75 (426)
T ss_dssp -CCEEEEEEEEECCTTS-SSCEEEEEEEEETTEEEEEESSCCC-----CSSCEEEECTTCEEEECEEEEEECTTCCSSCH
T ss_pred CcCcEEEECeEEEeCCC-CcEecCcEEEEECCEEEEecCCCCC-----CCCCEEEECCCCEEEeChhhhhhCcccccCCc
Confidence 36799999999997654 4567888999999999999986442 24779999999999999999999985422111
Q ss_pred ccCCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCccCHHHHHHHHHH---hCCeEEeecccccC
Q 012333 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL---LGLRACLVQSTMDC 173 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~ 173 (466)
. ........................++|+....+...... ...... .+............
T Consensus 76 ~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 138 (426)
T 3mkv_A 76 P----------------RVATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAGYPF-KQAVESGLVEGPRLFVSGRALSQ 138 (426)
T ss_dssp H----------------HHTTSCHHHHHHHHHHHHHHHHHTTEEEEEECSSCCHHH-HHHHHTTSSCCCEEEECCSEEEC
T ss_pred c----------------cccccchhHHHHHHHhhhhhhhcccccccccccccchhh-hhHhhccceeeceeccccccccc
Confidence 0 011122222233333344556677777776665443222 111111 11111111000000
Q ss_pred --CCC--------CCcc----c-----ccCChHHHHHHHHHHHHHhccCCCCCeEEEEee--------cccccCCHHHHH
Q 012333 174 --GEG--------LPAS----W-----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI--------RQIMNATDRLLL 226 (466)
Q Consensus 174 --~~~--------~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~l~ 226 (466)
+.. .... . .................+....+.......... ......+.....
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (426)
T 3mkv_A 139 TGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIR 218 (426)
T ss_dssp TTSTTCCCCCSSBCCCSSSCSSBCCTTCSEEECCSHHHHHHHHHHHHHHTCSSEEEECBCCSSCSSCCTTSBCSCHHHHH
T ss_pred cccccchhhhhhccccccccchhhhhccccccccCHHHHHHHHHHHhhcccccccccccccccccccccccchhhHHHHH
Confidence 000 0000 0 000000011112222222211111222111111 112233455555
Q ss_pred HHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEECccc
Q 012333 227 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPAS 306 (466)
Q Consensus 227 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~ 306 (466)
..+..+.........+.......... ... ......+...............+.....++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (426)
T 3mkv_A 219 AIVAEAQGRGTYVLAHAYTPAAIARA---------------VRC----GVRTIEHGNLIDDETARLVAEHGAYVVPTLVT 279 (426)
T ss_dssp HHHHHHHTTTCCEEEEECSHHHHHHH---------------HHT----TCCEEEECTTCCHHHHHHHHHHTCEEECCHHH
T ss_pred HHHHHHHhcccceeehhhhhhhHHHH---------------Hhh----ccccccccccccchhhhhhhhcCccccccccc
Confidence 55665665555555444321111100 000 00112223333333444444445444444332
Q ss_pred hh----------------------hccCCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCC
Q 012333 307 AM----------------------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTD 364 (466)
Q Consensus 307 ~~----------------------~~~~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (466)
.. ......+...+.+.|+.+.+++|..+..... ....+. .+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~d~~~~~~~~-~~~~~~---~~~------------ 343 (426)
T 3mkv_A 280 YDALASEGEKYGLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQRL-QSDEFR---ILA------------ 343 (426)
T ss_dssp HHHHHHHTTTTTCCHHHHTTHHHHHTTHHHHHHHHHHHTCCBCCCCCCCGGGGGG-TTHHHH---HHH------------
T ss_pred hhhhhhhhhhccccccccccccccccccchhhHHhhhcCceeeeccCCcccccch-HHHHHH---HHH------------
Confidence 11 0022345667888999999999987542111 111111 111
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEE
Q 012333 365 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 443 (466)
Q Consensus 365 ~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 443 (466)
.++|++|+|+++|.|||+++|+++++|+|++||+|||||||.| |++|.. . +.....+|+.||++||+|..
T Consensus 344 -~gls~~eal~~~T~~pA~~lgl~~~~Gsi~~G~~ADlvvlD~d-----Pl~di~-~--~~~~~~~v~~Vi~~G~vv~~ 413 (426)
T 3mkv_A 344 -EVLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGN-----PLKSVD-C--LLGQGEHIPLVMKDGRLFVN 413 (426)
T ss_dssp -TTSCHHHHHHHTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSC-----TTTCST-T--TCSSSTTCCEEEETTEEEEE
T ss_pred -hCCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCcceEEEECCC-----hHHhHH-H--HhCCCCCccEEEECCEEEEC
Confidence 1499999999999999999999988999999999999999999 444421 1 11234689999999997654
No 60
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=99.97 E-value=3.3e-31 Score=249.28 Aligned_cols=344 Identities=16% Similarity=0.143 Sum_probs=198.4
Q ss_pred EEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCC
Q 012333 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (466)
Q Consensus 21 ~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 100 (466)
++|+|++|++++ ....+++|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|.....
T Consensus 5 ~~i~n~~i~~~~---~~~~~~~i~I~dG~I~~i~~~~~~----~-~~~~viD~~G~~v~PGfID~HvHg~~G~------- 69 (381)
T 3iv8_A 5 YALTNCKIYTGN---DVLVKHAVIINGDKIEAVCPIESL----P-SEMNVVDLNGANLSPGFIDLQLNGCGGV------- 69 (381)
T ss_dssp EEEEEEEEECSS---CEESSEEEEEETTEEEEEEEGGGS----C-TTCEEEEEEEEEEEECEEEEEECEETTE-------
T ss_pred EEEEccEEEcCC---CeEeccEEEEECCEEEEEeCCCCC----C-CCCeEEECCCCEEccCeEeeeecccCCC-------
Confidence 589999999743 345678999999999999875432 1 3668999999999999999999974210
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCc-cCHHHHHH-------HHHHhCCeEEeeccccc
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QHVSEMAK-------AVELLGLRACLVQSTMD 172 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~-~~~~~~~~-------~~~~~g~~~~~~~~~~~ 172 (466)
+ +... ...+ ......+.++++|||+++.... .....+.+ .....+.. ...+..
T Consensus 70 -~-----------~~d~-~~~e---~l~~~~~a~~~~GvTt~l~t~~T~~~e~l~~al~~~~~~~~~~~~~---ilGiHl 130 (381)
T 3iv8_A 70 -M-----------FNDE-ITAE---TIDTMHKANLKSGCTSFLPTLITSSDENMRQAIAAAREYQAKYPNQ---SLGLHL 130 (381)
T ss_dssp -E-----------TTTS-CSHH---HHHHHHHHHHHTTEEEEEEEEESCCHHHHHHHHHHHHHHHHHCSSS---BCCEEE
T ss_pred -C-----------CCCC-CCHH---HHHHHHHHHHhCCccccccccCCCCHHHHHHHHHHHHHHHhcCCCc---eeEeec
Confidence 0 0000 1112 2223446688999999988532 12222211 11121111 122233
Q ss_pred CCCCCCcccccCChHHHHH-HHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhH
Q 012333 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (466)
+|+.+++..........+. ...+.++++.+.. ..++...-.+... . .+.++.+++.|+.+++......++..
T Consensus 131 EGPfis~~~~Ga~~~~~i~~p~~~~~~~~~~~~-~~i~~vTlAPE~~--~----~~~i~~l~~~gi~vs~GHs~A~~e~~ 203 (381)
T 3iv8_A 131 EGPYLNVMKKGIHSVDFIRPSDDTMIDTICANS-DVIAKVTLAPENN--K----PEHIEKLVKAGIVVSIGHTNATYSEA 203 (381)
T ss_dssp ECSSCCGGGCTTSCTTTCCCCCHHHHHHHHHTT-TSEEEEEECCTTS--C----HHHHHHHHHTTCEEEECSBCCCHHHH
T ss_pred cCcccCHhhcCCCCHHHcCCCCHHHHHHHHhcc-CCeEEEEECCCCC--c----HHHHHHHHHCCCEEEecCCCCCHHHH
Confidence 4554444333222211110 1112233333333 2466543333322 2 34566677888888875444443332
Q ss_pred HHHhhcCCCCchHHHHhhhccCCCC----------------eeEEEeecCChhhHHHHHhc-CCeEEECccchhhccCCc
Q 012333 252 VVMDTRKVDHGTVTFLDKIEFLQNN----------------LLSAHTVWVNHTEIGLLSRA-GVKVSHCPASAMRMLGFA 314 (466)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~H~~~~~~~~~~~~~~~-g~~~~~~p~~~~~~~~~~ 314 (466)
...-..|.. ...+.++.+..+..| .+|.++.|++++.++.+.+. +-.+. .-+..|+..+++
T Consensus 204 ~~a~~~Ga~-~~THlfNaM~~~~hR~PG~vga~l~~~~~~~elI~DG~Hv~p~~~~~~~~~~g~~~~-lvTDam~a~G~~ 281 (381)
T 3iv8_A 204 RKSFESGIT-FATHLFNAMTPMVGREPGVVGAIYDTPEVYAGIIADGFHVDYANIRIAHKIKGEKLV-LVTDATAPAGAE 281 (381)
T ss_dssp HHHHHTTCC-EESSTTSSBCCCBTTBCHHHHHHHHCTTCEEEEECSSSSSCHHHHHHHHHHHGGGEE-EECCBCTTTTSC
T ss_pred HHHHHcCCC-EeeeCCCCCCCccCCCCchHHHHhcCCCcEEEEEcCCccCCHHHHHHHHHhcCCEEE-EEeCcccccCCC
Confidence 221111111 111222222222111 27889999999998886553 21221 112333333322
Q ss_pred cHHHH-------HHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 012333 315 PIKEM-------LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (466)
Q Consensus 315 ~~~~~-------~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (466)
+-... .+.|. +.-.|....++..+++..++..... .++|++++++++|.|||+++|+
T Consensus 282 dg~y~lgg~~v~v~~g~--~~l~~g~lAGs~l~l~~~v~~~v~~--------------~g~~~~~al~~aT~~pA~~lg~ 345 (381)
T 3iv8_A 282 MDYFIFVGKKVYYRDGK--CVDENGTLGGSALTMIEAVQNTVEH--------------VGIALDEALRMATLYPAKAIGV 345 (381)
T ss_dssp CSEEESSSCEEEEETTE--EECTTCCBCSBCCCHHHHHHHHHHT--------------TCCCHHHHHHHHTHHHHHHHTC
T ss_pred CCeeecCCeEEEEECCE--EEcCCCCccChhhhHHHHHHHHHHh--------------hCCCHHHHHHHHHHHHHHHhCC
Confidence 11111 12221 2224555555677899998876421 2499999999999999999999
Q ss_pred CCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEE
Q 012333 388 DNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 443 (466)
Q Consensus 388 ~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 443 (466)
++++|+|++|++||||++|.+ .+|..||++|++||.
T Consensus 346 ~~~~G~i~~G~~ADlvvld~~--------------------~~v~~t~~~G~~v~~ 381 (381)
T 3iv8_A 346 DEKLGRIKKGMIANLTVFDRD--------------------FNVKATVVNGQYEQN 381 (381)
T ss_dssp TTTSSSCCTTSBCCEEEECTT--------------------CCEEEEEETTEEEEC
T ss_pred CCCCceECCCCcCCEEEECCC--------------------CCEEEEEECCEEeeC
Confidence 888899999999999999987 589999999999984
No 61
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=99.97 E-value=5.3e-30 Score=247.49 Aligned_cols=339 Identities=18% Similarity=0.205 Sum_probs=197.8
Q ss_pred ceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCccccccccc
Q 012333 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (466)
Q Consensus 19 ~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~ 98 (466)
.+++|+|++|++++ . ..+++|+|+||+|++|++.... .. ..+.++||++|++|+|||||+|+|+....
T Consensus 8 ~~~~i~n~~v~~~~---~-~~~~~v~i~~g~I~~ig~~~~~--~~-~~~~~viD~~g~~v~PG~iD~H~H~~~~~----- 75 (390)
T 1onw_A 8 GFTLLQGAHLYAPE---D-RGICDVLVANGKIIAVASNIPS--DI-VPNCTVVDLSGQILCPGFIDQHVHLIGGG----- 75 (390)
T ss_dssp CCEEEESCEEESSS---E-EEECEEEEETTEEEEEETTCCT--TS-SSSCEEEECTTCEEEECEEEEEECTTCCB-----
T ss_pred ceEEEECcEEECCC---C-CccceEEEECCEEEEEecCccc--CC-CCCCeEEeCCCCEECcCeeEeeECccccC-----
Confidence 46899999999743 1 3567999999999999875321 11 12568999999999999999999984211
Q ss_pred CCCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecCcc-----CHH---HHHHHHHHhCCeEEeeccc
Q 012333 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVS---EMAKAVELLGLRACLVQST 170 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~-----~~~---~~~~~~~~~g~~~~~~~~~ 170 (466)
...++. . .+.+. ....++++||||++++... ... ...++....|++.......
T Consensus 76 ~~~~~~-----------~-~~~~~-------~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~ 136 (390)
T 1onw_A 76 GEAGPT-----------T-RTPEV-------ALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTGA 136 (390)
T ss_dssp CTTSGG-----------G-BCCCC-------CHHHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHTSEEEEEEEC
T ss_pred cccccc-----------c-cCHHH-------HHHHHHHCCeeEEecCCCcccccCcHHHHHHHHHHHHhcCCceEEeccc
Confidence 000000 0 01110 2355789999999997532 122 3344555677775433222
Q ss_pred ccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCC------ccceecc
Q 012333 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVA 244 (466)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~------~v~~H~~ 244 (466)
+. .+........ ......++++. + .++.+.++.....+.+++.++++.++..+. .+++|..
T Consensus 137 ~~----~~~~~~~~~~----~~~~~~~~~~~----g-~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~~ 203 (390)
T 1onw_A 137 YH----VPSRTITGSV----EKDVAIIDRVI----G-VKCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMG 203 (390)
T ss_dssp SC----SSCCCSSSCH----HHHHHHCTTEE----E-EEEEESSTTSCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEEC
T ss_pred cC----CCchhhhhhh----cchhhhHHHhh----c-ceeeecCCCCCCCCHHHHHHHHHHHhhhhhhhccCceEEEEeC
Confidence 11 1111000111 11111111111 1 144455555556788888888877765543 2567774
Q ss_pred CCcchhHHHHhhcCCCCchHHHHhhhccCCCCe-eEEEeecCCh----hhHHHHHhcCCeEEECccchhhccCCccHHHH
Q 012333 245 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL-LSAHTVWVNH----TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEM 319 (466)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~H~~~~~~----~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~ 319 (466)
+........... . ..+...-.. ...|. +.++ +.++.+++.+.....++.... .....+++.+
T Consensus 204 ~~~~~~~~~~~~----------~-~~g~~~v~~l~~~h~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~ 270 (390)
T 1onw_A 204 DSKKALQPIYDL----------L-ENCDVPISKLLPTHV-NRNVPLFEQALEFARKGGTIDITSSIDEP-VAPAEGIARA 270 (390)
T ss_dssp SCTTTTHHHHHH----------H-HTCCCCGGGEEEECG-GGSHHHHHHHHHHHHTTCCEEEETTCCSS-SCHHHHHHHH
T ss_pred CCHHHHHHHHHH----------H-hccCCceEEeecccc-ccCHHHHHHHHHHHhcCCccccccccCCC-CcCHHHHHHH
Confidence 433222211111 0 111111111 11343 2232 344555555554444442221 1234578889
Q ss_pred HHcCCc---EEEccCCCCCCCC---------------CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 012333 320 LHADIC---VSLGTDGAPSNNR---------------MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 381 (466)
Q Consensus 320 ~~~gi~---~~~gsD~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~ 381 (466)
++.|++ ++++||+.+..+. ..+...++.. +.. .++|++++++++|.||
T Consensus 271 ~~~g~~~d~i~l~TD~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~------------~~~~~~~~~~~~t~np 336 (390)
T 1onw_A 271 VQAGIPLARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVL--VKD------------YDFSISDALRPLTSSV 336 (390)
T ss_dssp HHTTCCGGGEEEECCBTCC-------------CCCCSHHHHHHHHHH--HHH------------HCCCHHHHHGGGTHHH
T ss_pred HHcCCCccceEEEccCCCCCcccCCccccccccCCCHHHHHHHHHHH--HHH------------cCCCHHHHHHHHhHHH
Confidence 999984 7999999643210 0122222211 111 1499999999999999
Q ss_pred HHHcCCCCcccccccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECCeeee
Q 012333 382 AKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 449 (466)
Q Consensus 382 A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 449 (466)
|+++|++ ++|+|++|++|||||||.+ ..|..||++|++|+++|+++.
T Consensus 337 A~~~gl~-~~G~i~~G~~ADlvv~d~~--------------------~~v~~v~~~G~~v~~~g~~~~ 383 (390)
T 1onw_A 337 AGFLNLT-GKGEILPGNDADLLVMTPE--------------------LRIEQVYARGKLMVKDGKACV 383 (390)
T ss_dssp HHHTTCT-TCSSCCTTSBCCEEEECTT--------------------CCEEEEEETTEEEEETTEESS
T ss_pred HHHhCCC-CCcccCCCCcCCEEEEcCC--------------------CcEEEEEECCEEEEECCeEcc
Confidence 9999994 6799999999999999987 268899999999999999874
No 62
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.97 E-value=1.3e-30 Score=263.10 Aligned_cols=112 Identities=20% Similarity=0.206 Sum_probs=81.7
Q ss_pred cHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHH-HHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccc
Q 012333 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYL-ASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393 (466)
Q Consensus 315 ~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~ 393 (466)
....+++.|....+++|+.+............. ...................++|++++++++|.|||++|||++++|+
T Consensus 343 ~~~~l~~~G~~~~i~sD~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gls~~eal~~aTiNPAralGL~d~iGS 422 (566)
T 4ep8_C 343 AEDVLHDLGAFSLTSSDSQAMGRVGEVILRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHGIAHEVGS 422 (566)
T ss_dssp HHHHHHHHTSSCEECCCTTSSSCTTCHHHHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSS
T ss_pred HHHHHHhCCCcceEeecccccccccccccccCCCCchHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHhCCCCCCcC
Confidence 445677889999999999877654443322211 1111111111222223345799999999999999999999999999
Q ss_pred cccCCccCEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEE
Q 012333 394 LEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 443 (466)
Q Consensus 394 i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 443 (466)
|++||+|||||||++.+. .++..|+++|.+||-
T Consensus 423 IevGK~ADLVL~Dp~~f~-----------------vkP~~v~~~G~iv~a 455 (566)
T 4ep8_C 423 IEVGKLADLVVWSPAFFG-----------------VKPATVIKGGMIAIA 455 (566)
T ss_dssp SCTTSBCCEEEECGGGTT-----------------TSCSEEEETTEEEEE
T ss_pred CCCCCCCCEEEECccccC-----------------CCeeEEeeCCEEEEc
Confidence 999999999999998442 589999999999984
No 63
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.96 E-value=4.4e-29 Score=238.78 Aligned_cols=311 Identities=14% Similarity=0.155 Sum_probs=180.1
Q ss_pred eceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcccccccccCCCCchHhhhhccccccCCC
Q 012333 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (466)
Q Consensus 39 ~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (466)
.+++|+|+||+|++|++ . + || +|++|+|||||+|+|+...... .. .
T Consensus 28 ~~~~V~I~~g~I~~vg~-----------~-~-iD-~g~~v~PGlID~H~H~~~~~~~-------------------~~-~ 73 (376)
T 1o12_A 28 FTGDVEIEEGKIVKVEK-----------R-E-CI-PRGVLMPGFVDPHIHGVVGADT-------------------MN-C 73 (376)
T ss_dssp EEEEEEEETTEEEEEEE-----------C-C-SC-CSSEEEECEEEEEECEETTEET-------------------TT-T
T ss_pred cCceEEEECCEEEEeCC-----------C-c-cC-CCCEEccCeEEEeecCCCCCCC-------------------Ch-h
Confidence 46799999999999975 1 4 89 9999999999999998542210 00 0
Q ss_pred ChhHHHHHHHHHHHHHHhcCceeeeecCccC-H-------HHHHHHHHH-hC--CeEEeecc-cccC-CCC-CCcccccC
Q 012333 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQH-V-------SEMAKAVEL-LG--LRACLVQS-TMDC-GEG-LPASWAVR 184 (466)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~-~-------~~~~~~~~~-~g--~~~~~~~~-~~~~-~~~-~~~~~~~~ 184 (466)
+ ......+++++||||+++++... . ..+.++... .| ++...... .... ..+ .++.....
T Consensus 74 ~-------l~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~g~~~~g~~~~~~~~g~~~~~~~~~ 146 (376)
T 1o12_A 74 D-------FSEMEEFLYSQGVTTFLATTVSTSLEKMKEILRKARDYILENPSTSLLGVHLEGPYISKEKKGAHSEKHIRP 146 (376)
T ss_dssp C-------HHHHHHHHHTTTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCTTCSEEEEEEECSSSCGGGCTTSCTTTCCC
T ss_pred h-------HHHHHHHHHhCCcEEEEeccCCCCHHHHHHHHHHHHHHhhccCCCceEEEEEEcCcCCcccCCCCCHHHhcC
Confidence 0 11235668999999999986432 1 223334444 35 33222111 1100 000 01111110
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccce-eccCCcchhHHHHhh--cCCC-
Q 012333 185 TTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDT--RKVD- 260 (466)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~--~~~~- 260 (466)
. ..+.++++ ......+.+.+..... +++++|+++|+++++ |+.+...+....... ..+.
T Consensus 147 ~-------~~~~~~~~---~~~~~~~~~~pe~~~~-------~~i~~A~~~g~~v~igH~~~~~~~i~~a~~~G~~~itH 209 (376)
T 1o12_A 147 P-------SERELSEI---DSPAKMLTFAPEIESS-------ELLLRLVKRDIVLSAGHSIATFEEFMKFYKEGVKRITH 209 (376)
T ss_dssp C-------CHHHHTTC---CTTEEEEEECTTSTTG-------GGGGGGGGGTCEEEECSBCCCHHHHHHHHTTTCCEESS
T ss_pred C-------CHHHHHHh---hCCeEEEEEccCCccH-------HHHHHHHHCCCEEEeecCccCHHHHHHHHHCCCCeEEe
Confidence 0 02233333 1122222233222111 567889999999999 987654443333221 0000
Q ss_pred ----CchHHHHhhhccC-----CCCe---eEEEeecCChhhHHHHHhc-CCeEEECccchhhc-cCCccHHHHHHcCCcE
Q 012333 261 ----HGTVTFLDKIEFL-----QNNL---LSAHTVWVNHTEIGLLSRA-GVKVSHCPASAMRM-LGFAPIKEMLHADICV 326 (466)
Q Consensus 261 ----~~~~~~~~~~~~~-----~~~~---~~~H~~~~~~~~~~~~~~~-g~~~~~~p~~~~~~-~~~~~~~~~~~~gi~~ 326 (466)
..+.+.+ ..+.+ ..+. ++.|+.+++++.++.+.+. +.. .+++.++... .+.++.. +...|.++
T Consensus 210 ~~~~~~~~~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~~-~~~~~sd~~~~~g~~~g~-~~~~g~~~ 286 (376)
T 1o12_A 210 FPNGLKPLHHR-EIGITGAGLLLDDVKLELICDGVHLSREMVKLVYKVKKAN-GIVLVTDSISAAGLKDGT-TTLGDLVV 286 (376)
T ss_dssp TTTTBCCCCSS-CCHHHHHHHHCTTCEEEEECSSSSSCHHHHHHHHHHHTGG-GEEEECCBCTTTTSCSCE-EESSSSEE
T ss_pred cccCcCChhhc-ccchhhhhhcCCcceEEEeCCCcCcCHHHHHHHHhhCCCC-CEEEecCchhhcCCCCee-EEECCeEE
Confidence 0011100 00000 1232 4679999999999998777 553 3444444322 2222221 22223444
Q ss_pred EE--c----cCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCcc
Q 012333 327 SL--G----TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKA 400 (466)
Q Consensus 327 ~~--g----sD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~A 400 (466)
.+ + +|....+...+++..++.+... . ++|++++++++|.|||+++|++++ |+|++|++|
T Consensus 287 ~~~~g~~~~~~g~~~g~~~~l~~~l~~~~~~--~------------~~~~~~~l~~~T~~~A~~lgl~~~-G~i~~G~~A 351 (376)
T 1o12_A 287 KVKDGVPRLEDGTLAGSTLFFSQAVKNFRKF--T------------GCSITELAKVSSYNSCVELGLDDR-GRIAEGTRA 351 (376)
T ss_dssp EEETTEEECTTSCBCCBCCCHHHHHHHHHHH--H------------CCCHHHHHHHHTHHHHHHTTCTTS-SCCSTTSBC
T ss_pred EEeCCeEEeCCCcccccccCHHHHHHHHHHH--c------------CCCHHHHHHHHHHHHHHHhCCCCC-ccCCCCCcC
Confidence 44 2 3333333456788888765421 1 499999999999999999999765 999999999
Q ss_pred CEEEEcCCCCCCCCcCCcccceecccCCCCeeEEEEccEEEEECC
Q 012333 401 DMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 445 (466)
Q Consensus 401 Dlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g 445 (466)
||+|+|.+ .+|..||++|++||+++
T Consensus 352 Dlv~~d~~--------------------~~v~~v~~~G~~v~~~~ 376 (376)
T 1o12_A 352 DLVLLDED--------------------LNVVMTIKEGEVVFRSR 376 (376)
T ss_dssp CEEEECTT--------------------CCEEEEEETTEEEEEC-
T ss_pred CEEEECCC--------------------CCEEEEEECCEEEeecC
Confidence 99999987 58999999999999875
No 64
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=99.67 E-value=6.1e-15 Score=137.84 Aligned_cols=161 Identities=11% Similarity=0.087 Sum_probs=99.7
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHH-HHhhhc-cCCCCeeEEEeecCChhhHHHHHh-c
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKIE-FLQNNLLSAHTVWVNHTEIGLLSR-A 296 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~H~~~~~~~~~~~~~~-~ 296 (466)
.+.+.+.++++.+++.|.++.+|+.+...... .....+. .+...+ ..+.+..+.|.. +.+.++.+++ .
T Consensus 133 ~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~~-------~E~~ai~r~~~la~~~~g~~lhi~HvS--t~~~v~~I~~A~ 203 (359)
T 3pnu_A 133 FDIEYLKPTLEAMSDLNIPLLVHGETNDFVMD-------RESNFAKIYEKLAKHFPRLKIVMEHIT--TKTLCELLKDYE 203 (359)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECCCCSSCGGG-------TTGGGHHHHHHHHHHCTTSCEEECSCC--SHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCchHhHH-------HHHHHHHHHHHHHHHcCCCcEEEEecC--cHHHHHHHHhcC
Confidence 37889999999999999999999976542110 0111122 222222 235555555554 3566666666 4
Q ss_pred CCeEEECccchhh-------------ccCCc---------cHHHHHHcCCcE-EEccCCCCCCCCC----------CHH-
Q 012333 297 GVKVSHCPASAMR-------------MLGFA---------PIKEMLHADICV-SLGTDGAPSNNRM----------SIV- 342 (466)
Q Consensus 297 g~~~~~~p~~~~~-------------~~~~~---------~~~~~~~~gi~~-~~gsD~~~~~~~~----------~~~- 342 (466)
.+.+.+||+.-.. ..-.+ .+++.+..|.+. +++|||.|+.... ...
T Consensus 204 ~VtaEv~phhL~lt~~~~~~~~~~~~~k~~PPLR~~~dr~aL~~al~dG~id~~iaTDHaPh~~~eK~~~~g~~Gi~~~~ 283 (359)
T 3pnu_A 204 NLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFSGYEKVMFGSDSAPHPKDTKECCGCAAGVFSAP 283 (359)
T ss_dssp TEEEEECSGGGTCCHHHHHTSSCCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCBC------CCCSCBCCGG
T ss_pred CceEEEechhhEEcHHHhcCcCCCCceEEcCCCCCHHHHHHHHHHHhcCCCCEEEecCCCCCCHHHhCCCCCCCChhhHH
Confidence 6677889874321 01112 455677889888 7999999874211 100
Q ss_pred --HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEEEcCCCCC
Q 012333 343 --DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 411 (466)
Q Consensus 343 --~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~ 411 (466)
-++.... +. . .++++++++.+|.|||+++||..++ | |||+||| ..|+
T Consensus 284 ~~L~l~~~~-~~-~------------~~~l~~lv~~~s~nPAki~gL~~~~-----G--Adlvl~d-~~~~ 332 (359)
T 3pnu_A 284 VILPVLAEL-FK-Q------------NSSEENLQKFLSDNTCKIYDLKFKE-----D--KILTLEE-KEWQ 332 (359)
T ss_dssp GHHHHHHHH-HH-H------------HSCHHHHHHHHTHHHHHHHTCCCSS-----C--CEEEEEC-CCEE
T ss_pred HHHHHHHHH-Hh-h------------cCCHHHHHHHHHHhHHHHhCCCCCC-----C--CeEEEEe-cCEE
Confidence 0111111 11 1 2689999999999999999996443 4 9999999 6444
No 65
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=99.66 E-value=3.3e-15 Score=141.15 Aligned_cols=243 Identities=16% Similarity=0.096 Sum_probs=166.5
Q ss_pred CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceee---eecC------ccC--------HHHHHHHHHHh--
Q 012333 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCF---AEAG------GQH--------VSEMAKAVELL-- 160 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv---~~~~------~~~--------~~~~~~~~~~~-- 160 (466)
..++.+|+..+.+......++++.+......+.++++.|||++ .+.. +.. ...+.++..+.
T Consensus 90 ~~~L~~~l~~~~~~~~~~~t~ed~~~~a~~~l~e~~~~GV~y~E~r~dp~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~ 169 (371)
T 2pgf_A 90 GKSLGEFVEKAIKVADIFHDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQAIVKGIKEVVELLDH 169 (371)
T ss_dssp CSCHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHTEEEEEEEECHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCEEEEEEECcccccccCCCCHHHHHHHHHHHHHHHHHHccC
Confidence 4567788888888777778888888888889999999999997 2210 111 11223334456
Q ss_pred CCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccc
Q 012333 161 GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 240 (466)
Q Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 240 (466)
|++.....+.... .++ ....+.++ ...+ .....+. +++.+.... ++.+.++++.|+++|+++.
T Consensus 170 gi~~~li~~~~r~---~~~----~~~~~~~~---~a~~----~~~~vvg--~dl~g~e~~-~~~~~~~~~~A~~~gl~~~ 232 (371)
T 2pgf_A 170 KIHVALMCIGDTG---HEA----ANIKASAD---FCLK----HKADFVG--FDHGGHEVD-LKEYKEIFDYVRESGVPLS 232 (371)
T ss_dssp SSEEEEEEEEEES---STT----CCHHHHHH---HHHH----TTTTEEE--EEEEESCCC-GGGGHHHHHHHHHTTCCBE
T ss_pred CCEEEEEEEecCC---CCH----HHHHHHHH---HHHh----CCCCEEE--EecCCCccc-HHHHHHHHHHHHHcCCcEE
Confidence 8877555444431 111 11222222 2222 1122233 444444444 6788999999999999999
Q ss_pred eeccCCcchhHHHHhhcCCCCch-HHHHhhhccCCCCeeEEEeecCChhh--HHHHHhcCCeEEECccchhhcc-----C
Q 012333 241 MHVAEIPYENQVVMDTRKVDHGT-VTFLDKIEFLQNNLLSAHTVWVNHTE--IGLLSRAGVKVSHCPASAMRML-----G 312 (466)
Q Consensus 241 ~H~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~H~~~~~~~~--~~~~~~~g~~~~~~p~~~~~~~-----~ 312 (466)
+|+.+... + .+ ..+.+.+..++.. .+.||.++++++ ++++++.|+.+++||.+++... .
T Consensus 233 ~HagE~~~---------~---~~~~~i~~al~~lg~~-ri~Hgv~l~~~~~l~~~l~~~~i~v~~cP~SN~~l~~~~~~~ 299 (371)
T 2pgf_A 233 VHAGEDVT---------L---PNLNTLYSAIQVLKVE-RIGHGIRVAESQELIDMVKEKNILLEVCPISNVLLKNAKSMD 299 (371)
T ss_dssp EEESCCTT---------S---SSSHHHHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHTTCEEEECHHHHHHTTSSSCGG
T ss_pred EeeCCCCC---------C---CchHHHHHHHhccCCC-EEecchhccccHHHHHHHHHcCCeEEECcchhHHhCCCCccc
Confidence 99988631 0 11 2333444444444 699999998766 9999999999999999998763 2
Q ss_pred CccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 313 FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 313 ~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
..|+++++++|+++++|||.+...+ .+++.+++.+.... +++.+++ ..+|.|+++..+++
T Consensus 300 ~~pi~~ll~~Gv~V~lgTD~~~~~~-~~l~~e~~~a~~~~--------------~l~~~~l-~~lt~ns~~asf~~ 359 (371)
T 2pgf_A 300 THPIRQLYDAGVKVSVNSDDPGMFL-TNINDDYEELYTHL--------------NFTLEDF-MKMNEWALEKSFMD 359 (371)
T ss_dssp GCTHHHHHHTTCEEEECCBCHHHHT-CCHHHHHHHHHHHH--------------CCCHHHH-HHHHHHHHHHCCSC
T ss_pred cChHHHHHHCCCeEEEeCCCCcccC-CCHHHHHHHHHHHh--------------CCCHHHH-HHHHHHHHHHHcCC
Confidence 3699999999999999999865433 48999988775432 4999996 88899999999885
No 66
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.59 E-value=2.4e-15 Score=108.90 Aligned_cols=70 Identities=24% Similarity=0.386 Sum_probs=55.4
Q ss_pred cceEEEEccEEEeecCCcceeeceEEEEECCEEEEEcCCchhhhhhccCCCeEEeCCCcEEeecccccccCCcc
Q 012333 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (466)
Q Consensus 18 ~~~~lI~n~~i~~~d~~~~~~~~~~v~I~~G~I~~Ig~~~~~~~~~~~~~~~~iD~~G~~v~PG~ID~H~H~~~ 91 (466)
+++++|+|++|+++++.. ...++|+|++|+|++|++..+... ...+.++||++|++|+|||||+|+|+..
T Consensus 3 ~~~~li~n~~i~~~~~~~--~~~~~i~I~~g~I~~ig~~~~~~~--~~~~~~viD~~g~~v~PG~ID~H~H~~~ 72 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPSQ--PEVSAIAITDGLITAVGGDELLNS--ATEKTKKIDLKRKRAIPGLNDSHIHVIR 72 (81)
T ss_dssp CCSEEEESSEEECSCTTC--SEESEEEEETTEEEEEESGGGGGG--CCTTCEEEECTTCEEEECCCCTTEEEEC
T ss_pred cCCEEEECCEEEeCCCCC--ccccEEEEECCEEEEEeCchHhcc--cCCCCEEEECCCCEEeeCeEeeeeCCCC
Confidence 478999999999865432 246799999999999998654321 1235689999999999999999999854
No 67
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=99.58 E-value=8.1e-14 Score=128.33 Aligned_cols=243 Identities=16% Similarity=0.104 Sum_probs=158.5
Q ss_pred CCCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecC--------ccCHHH--------HHHHHHHhCCe
Q 012333 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--------GQHVSE--------MAKAVELLGLR 163 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~--------~~~~~~--------~~~~~~~~g~~ 163 (466)
..++.+++..+.+...-..+.++.+......++.+.+.||+.+--.. +-.... +.++....|+.
T Consensus 53 ~~~l~~fl~~~~~~~~vl~t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~ 132 (326)
T 3pao_A 53 FNNLQEFLDLYYAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEKLLGIR 132 (326)
T ss_dssp CSSHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHHTTTCCHHHHHHHHHHHHHHHHHHHCCE
T ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhccCCCCHHHHHHHHHHHHHHHHhhCceE
Confidence 34667777777777666677777777777788999999999852211 112222 22233446766
Q ss_pred EEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceec
Q 012333 164 ACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 243 (466)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 243 (466)
..+..+.... .+ ... ..+..+...++.+ ..+.+.+.... ...+++.+.++++.|++.|+++.+|+
T Consensus 133 ~~lI~~~~R~---~~-------~~~-a~~~~~~a~~~~~---~vvG~dL~g~E-~~~~~~~~~~~~~~A~~~gl~~~~Ha 197 (326)
T 3pao_A 133 HGLILSFLRH---LS-------EEQ-AQKTLDQALPFRD---AFIAVGLDSSE-VGHPPSKFQRVFDRARSEGFLTVAHA 197 (326)
T ss_dssp ECCEEEEETT---SC-------HHH-HHHHHHHHGGGGG---GCSEEEEESCC-TTCCGGGGHHHHHHHHHTTCEECEEE
T ss_pred EEEEEEeCCC---CC-------HHH-HHHHHHHHhhccc---cceeeCCCCCC-CCCCHHHHHHHHHHHHHcCCceeeec
Confidence 5444444321 11 111 1222222222322 33333333222 33456678899999999999999999
Q ss_pred cCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC--hhhHHHHHhcCCeEEECccchhhcc-----CCccH
Q 012333 244 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRML-----GFAPI 316 (466)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~g~~~~~~p~~~~~~~-----~~~~~ 316 (466)
.+... +..+.+.++.++. ..+.||.+++ ++.++++++.++.+.+||.+|+... +..|+
T Consensus 198 gE~~~--------------~~~i~~al~~lg~-~rigHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~~~~~~~hPi 262 (326)
T 3pao_A 198 GEEGP--------------PEYIWEALDLLKV-ERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTI 262 (326)
T ss_dssp SSSSC--------------HHHHHHHHHTTCC-SSEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTSSSSGGGCCH
T ss_pred CCCCC--------------HHHHHHHHhcCCC-ceeeeeeeecccHHHHHHHHHcCCeEEECchhHHHhCCCCCcccChH
Confidence 88642 1222233333333 2389999998 6699999999999999999998773 35699
Q ss_pred HHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 317 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 317 ~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
++++++|++++++||.+...+. +++.+++.+.... +++.++ +..++.|+++...+.
T Consensus 263 ~~ll~~Gv~V~l~TDdp~~~~~-~l~~e~~~a~~~~--------------~l~~~~-l~~l~~nsi~~sf~~ 318 (326)
T 3pao_A 263 LDMLERGVKVTVNSDDPAYFGG-YVTENFHALQQSL--------------GMTEEQ-ARRLAQNSLDARLVK 318 (326)
T ss_dssp HHHHHHTCCEEECCBSHHHHTC-CHHHHHHHHHHHH--------------CCCHHH-HHHHHHHHHHTCC--
T ss_pred HHHHHCCCeEEEeCCCcccCCC-CHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHHHhc
Confidence 9999999999999998755444 8888888765432 489999 578889999988764
No 68
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=99.57 E-value=4.8e-13 Score=123.98 Aligned_cols=243 Identities=15% Similarity=0.095 Sum_probs=158.6
Q ss_pred CCchHhhhhccccccCCCChhHHHHHHHHHHHHHHhcCceeeeecC--------ccCHHHHHH--------HHHHhCCeE
Q 012333 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--------GQHVSEMAK--------AVELLGLRA 164 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~--------~~~~~~~~~--------~~~~~g~~~ 164 (466)
.++.+++..+.+...-..+.++.+.-....++.+.+.||+.+--.. +-......+ +....|+..
T Consensus 57 ~~l~~fl~~f~~~~~vl~~~e~~~~~~~~~l~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~ 136 (343)
T 3rys_A 57 TDLQSFLDLYYANMAVLQTEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVANALATSEEDFGVST 136 (343)
T ss_dssp SSHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEE
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCEEEEEEecHHHhccCCCCHHHHHHHHHHHHHHHhhcCceeE
Confidence 4566666666655554556666666666788999999999863211 112222222 233457666
Q ss_pred EeecccccCCCCCCcccccCChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceecc
Q 012333 165 CLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (466)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~ 244 (466)
.+-.+.+.. .+ .....+ ..+...++ .+..+.+.+.... ...+++.+.++++.|++.|+++.+|+.
T Consensus 137 ~lI~~~~R~---~~-------~~~a~~-~l~~a~~~---~~~vvG~dL~g~E-~~~~~~~~~~~~~~A~~~gl~~~~Hag 201 (343)
T 3rys_A 137 LLIAAFLRD---MS-------EDSALE-VLDQLLAM---HAPIAGIGLDSAE-VGNPPSKFERLYQRAAEAGLRRIAHAG 201 (343)
T ss_dssp EEEEEEETT---SC-------HHHHHH-HHHHHHHT---TCCCCEEEEESCC-TTCCGGGGHHHHHHHHHTTCEEEEEES
T ss_pred EEEEEeCCC---CC-------HHHHHH-HHHHHHhC---CCCEEEEecCCcc-cCCCHHHHHHHHHHHHHCCCeEEEeeC
Confidence 554444421 11 112222 22222223 2344444343222 344567788999999999999999998
Q ss_pred CCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC--hhhHHHHHhcCCeEEECccchhhccC-----CccHH
Q 012333 245 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRMLG-----FAPIK 317 (466)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~g~~~~~~p~~~~~~~~-----~~~~~ 317 (466)
+... +..+.+.+..++. ..+.||.++. ++.++++++.++.+.+||.+|+.... ..|++
T Consensus 202 E~~~--------------~~~i~~al~~lg~-~rIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~~~~~~~hPi~ 266 (343)
T 3rys_A 202 EEGP--------------ASYITEALDVLHV-ERIDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRLRAVDKLADHPLP 266 (343)
T ss_dssp SSSC--------------HHHHHHHHHTSCC-SEEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTSSSCGGGCSHH
T ss_pred CCCC--------------HHHHHHHHhcCCc-ceeeeeeeecCChHHHHHHHhcCCCeeEchhHHHHhCCCCCcccchHH
Confidence 8643 2223333433333 2489999987 47899999999999999999987732 46999
Q ss_pred HHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 012333 318 EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (466)
Q Consensus 318 ~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (466)
.++++|++++++||.+...+. ++..+++.+.... +++.++ +..++.|+++...+++
T Consensus 267 ~ll~~Gv~V~l~TDdp~~~~~-~l~~E~~~a~~~~--------------~l~~~~-l~~l~~nsi~~sf~~~ 322 (343)
T 3rys_A 267 EMLAIGLNVCVNSDDPAYFGG-YVDDNFEQLVKVL--------------EFSVPE-QATLAANSIRSSFASD 322 (343)
T ss_dssp HHHHTTCCEEECCBSTTTTTC-CHHHHHHHHHHHH--------------CCCHHH-HHHHHHHHHHHSSSCH
T ss_pred HHHHCCCeEEEeCCCccccCC-CHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHHCCCH
Confidence 999999999999998876555 8899988765432 389999 5777899999988753
No 69
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=99.52 E-value=7.1e-13 Score=124.66 Aligned_cols=155 Identities=10% Similarity=0.108 Sum_probs=90.0
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHH-HhhcCCCCchHHHH--hhhccCCCCeeEEEeecCChhhHHHHHhc
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV-MDTRKVDHGTVTFL--DKIEFLQNNLLSAHTVWVNHTEIGLLSRA 296 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 296 (466)
.+.+.+.++++.+++.+.++.+|+.+........ .+... ....+ ...+..+.+..+.|.. +.+.++.+++.
T Consensus 117 ~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~~----~~~~i~~~la~~~~~~~hi~Hvs--t~~~~~~i~~a 190 (347)
T 2z26_A 117 TSVDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARF----IESVMEPLRQRLTALKVVFEHIT--TKDAADYVRDG 190 (347)
T ss_dssp SCGGGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHH----HHHTHHHHHHHSTTCCEEECSCC--SHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHHH----HHHHHHHHHHhhcCCcEEEEECC--cHHHHHHHHHh
Confidence 4667889999999999999999997643110000 00000 01111 1222344555455543 35556666654
Q ss_pred --CCeEEECccchhh---------c----cC---------CccHHHHHHcCCcE-EEccCCCCCCC----------CC--
Q 012333 297 --GVKVSHCPASAMR---------M----LG---------FAPIKEMLHADICV-SLGTDGAPSNN----------RM-- 339 (466)
Q Consensus 297 --g~~~~~~p~~~~~---------~----~~---------~~~~~~~~~~gi~~-~~gsD~~~~~~----------~~-- 339 (466)
++...+||+.... . .- ...+++.+..|.+. +++|||.|+.. ++
T Consensus 191 k~~Vt~e~~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~~~g~~Gi~~ 270 (347)
T 2z26_A 191 NERLAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFN 270 (347)
T ss_dssp CTTEEEEECHHHHHCCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSSSSBCCCCCC
T ss_pred CCCceEeecchHheecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcCCCCCCCcCc
Confidence 4566778875310 0 11 12355677888777 89999977631 01
Q ss_pred -CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCccccc
Q 012333 340 -SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 394 (466)
Q Consensus 340 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i 394 (466)
...-.+.... +. . ++|++++++.+|.|||+++||.+++|+|
T Consensus 271 ~e~~l~l~~~~-~~-~------------~~sl~~~v~~~s~nPAki~gl~~~kG~i 312 (347)
T 2z26_A 271 APTALGSYATV-FE-E------------MNALQHFEAFCSVNGPQFYGLPVNDTFI 312 (347)
T ss_dssp TTTHHHHHHHH-HH-H------------TTCGGGHHHHHHTHHHHHHTCCCCCCEE
T ss_pred HHHHHHHHHHH-hh-c------------CCCHHHHHHHHhHhHHHHhCCCCCCCeE
Confidence 1111111111 11 1 3899999999999999999996567875
No 70
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=99.38 E-value=6.2e-11 Score=110.64 Aligned_cols=135 Identities=14% Similarity=0.109 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC--hhhHHHHHhcCCeE
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKV 300 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~g~~~ 300 (466)
+.+.++++.|++.|+++.+|+.+.... ..+.+.+..++.. .+.||.++. ++.++++++.++.+
T Consensus 192 ~~f~~~f~~A~~~gl~~~~HagE~~~~--------------~~i~~al~~lg~~-RIgHgv~l~~d~~l~~~l~~~~i~l 256 (367)
T 3iar_A 192 PGHVQAYQEAVKSGIHRTVHAGEVGSA--------------EVVKEAVDILKTE-RLGHGYHTLEDQALYNRLRQENMHF 256 (367)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSSSCH--------------HHHHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCCeeEEecCCcCCh--------------HHHHHHHHccCCc-eeeeeeeecCCHHHHHHHHhCCcEE
Confidence 577889999999999999999886432 1222333333332 489999985 47899999999999
Q ss_pred EECccchhhcc-----CCccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 012333 301 SHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 375 (466)
Q Consensus 301 ~~~p~~~~~~~-----~~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~ 375 (466)
.+||.+++... ...|++.++++|++++++||.+.... .++..++..+.... +++.++ +.
T Consensus 257 e~cP~SN~~l~~~~~~~~hPi~~ll~~Gv~v~l~TDdp~~~~-~~l~~e~~~a~~~~--------------glt~~e-l~ 320 (367)
T 3iar_A 257 EICPWSSYLTGAWKPDTEHAVIRLKNDQANYSLNTDDPLIFK-STLDTDYQMTKRDM--------------GFTEEE-FK 320 (367)
T ss_dssp EECHHHHHHTSSSCTTSCCHHHHHHHTTCCEEECCBSHHHHT-CCHHHHHHHHHHHH--------------CCCHHH-HH
T ss_pred EECHHHHHHhCCCCCcccChHHHHHHCCCEEEECCCCccccC-CCHHHHHHHHHHHc--------------CCCHHH-HH
Confidence 99999998773 35699999999999999999864332 35777877654321 499998 67
Q ss_pred HHhHHHHHHcCCC
Q 012333 376 MATINGAKSVLWD 388 (466)
Q Consensus 376 ~~T~~~A~~lgl~ 388 (466)
.++.|+++...++
T Consensus 321 ~l~~nsi~~sf~~ 333 (367)
T 3iar_A 321 RLNINAAKSSFLP 333 (367)
T ss_dssp HHHHHHHHTSSSC
T ss_pred HHHHHHHHHhCCC
Confidence 7789999988875
No 71
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=99.17 E-value=2.3e-09 Score=99.68 Aligned_cols=228 Identities=14% Similarity=0.048 Sum_probs=121.4
Q ss_pred HHHHHHhcCceeeeecCcc----CHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHH-HHHHHHHHHhcc-C
Q 012333 130 CGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCI-QSQKELYAKHHH-A 203 (466)
Q Consensus 130 ~~~~~~~~GvTtv~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~ 203 (466)
.+..+.+.|||++++.+.. ......+..+..+++++...++.. ..+ .+......+.+ +...+.+..... .
T Consensus 52 ~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~~~G~hp---~~p-~~~~~~~~~~l~~~l~~~~~~gi~~~ 127 (330)
T 2ob3_A 52 GLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWF---DPP-LSMRLRSVEELTQFFLREIQYGIEDT 127 (330)
T ss_dssp HHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEECEEECCS---CCC-HHHHTCCHHHHHHHHHHHHHTCSTTS
T ss_pred HHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEEEecCCc---CCC-chhccCCHHHHHHHHHHHHHhhcccc
Confidence 4566889999999998743 455556666667766654433321 012 11111111111 111221111001 0
Q ss_pred --CCCCeEEEEeecccccCCHH---HHHHHHHHHHHcCCccceecc--CCcchhHHHHhhcCCCCchHHHHhhhccCCCC
Q 012333 204 --ADGRIRIWFGIRQIMNATDR---LLLETRDMAREFKTGIHMHVA--EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNN 276 (466)
Q Consensus 204 --~~~~i~~~~~~~~~~~~~~~---~l~~~~~~a~~~~~~v~~H~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (466)
....+.+ +.. +..++. .++..+++|+++++++.+|+. ..... + ..+++...+.-..+
T Consensus 128 ~~k~~aiEi--Gld--~~~~~~q~~~f~~q~~lA~~~glPv~iH~~~~~r~a~-e-----------~l~iL~~~g~~~~~ 191 (330)
T 2ob3_A 128 GIRAGIIKV--ATT--GKATPFQELVLKAAARASLATGVPVTTHTAASQRDGE-Q-----------QAAIFESEGLSPSR 191 (330)
T ss_dssp CCCCSEEEE--ECS--SSCCHHHHHHHHHHHHHHHHHCCCEEEECCGGGTHHH-H-----------HHHHHHHTTCCGGG
T ss_pred ccceeEEEE--eCC--CCCCHHHHHHHHHHHHHHHHhCCeEEEECCCCCCCHH-H-----------HHHHHHHcCcCccc
Confidence 1122232 222 223333 377889999999999999984 11111 0 23334443322224
Q ss_pred eeEEEee-cCChhhHHHHHhcCCeEEEC--ccchh--------------hc--cCCccHHHHHHcC--CcEEEccCCCCC
Q 012333 277 LLSAHTV-WVNHTEIGLLSRAGVKVSHC--PASAM--------------RM--LGFAPIKEMLHAD--ICVSLGTDGAPS 335 (466)
Q Consensus 277 ~~~~H~~-~~~~~~~~~~~~~g~~~~~~--p~~~~--------------~~--~~~~~~~~~~~~g--i~~~~gsD~~~~ 335 (466)
..+.||. ..+.+..+.+.++|..+.+. ....+ .. .....++++++.+ -.+.++||.+..
T Consensus 192 ~~i~H~f~~~~~e~a~~~~~~G~~i~~~~~G~~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~~ 271 (330)
T 2ob3_A 192 VCIGHSDDTDDLSYLTALAARGYLIGLDHIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTFG 271 (330)
T ss_dssp EEECSGGGCCCHHHHHHHHHTTCEEEECCTTCCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCSE
T ss_pred EEEeCCCCCCCHHHHHHHHhCCCEEEeCCCccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCCC
Confidence 4688998 47888999999999998776 21111 00 0112367788888 678999998631
Q ss_pred CCCCCHH-HHH-------H----HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 336 NNRMSIV-DEM-------Y----LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 336 ~~~~~~~-~~~-------~----~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
.....++ ... . ....+.+. ...|+|++++.+++|.||+++|+
T Consensus 272 l~~~~~~~g~~~~~n~pn~~~~~~~~~ia~l---------~~~G~~~eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 272 FSSYVTNIMDVMDRVNPDGMAFIPLRVIPFL---------REKGVPQETLAGITVTNPARFLS 325 (330)
T ss_dssp ECSSSTTHHHHHHHHCTTGGGHHHHTHHHHH---------HHTTCCHHHHHHHHTHHHHHHHS
T ss_pred cccccccCCCcccccCCCCcchHHHHHHHHH---------HHcCCCHHHHHHHHHHHHHHHhc
Confidence 1100000 100 0 00001100 00259999999999999999997
No 72
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=99.09 E-value=1e-08 Score=93.95 Aligned_cols=227 Identities=12% Similarity=0.044 Sum_probs=120.0
Q ss_pred HHHHHHHhcCceeeeecCcc----CHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHH-hccC
Q 012333 129 LCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK-HHHA 203 (466)
Q Consensus 129 ~~~~~~~~~GvTtv~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 203 (466)
..+..+...|||++++++.. ......+..+..+++++...++.... ..| .+...... ++..+.+.+ +...
T Consensus 37 ~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~~~~~-~hP-~~~~~~~~---~~l~~~~~~~l~~g 111 (291)
T 1bf6_A 37 QEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDA-FFP-EHVATRSV---QELAQEMVDEIEQG 111 (291)
T ss_dssp HHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCCGG-GCC-THHHHSCH---HHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEeeccccCc-cCc-HhhhcCCH---HHHHHHHHHHHHhc
Confidence 34456778999999998752 35555566666676665443331100 011 11101111 111122221 2110
Q ss_pred ---CCCCeEEE--EeecccccCCH---HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCC
Q 012333 204 ---ADGRIRIW--FGIRQIMNATD---RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 275 (466)
Q Consensus 204 ---~~~~i~~~--~~~~~~~~~~~---~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (466)
....+... .+.... ..++ +.+++.+++|+++++++.+|+....... ...+.+...+....
T Consensus 112 i~~~~~~~~~iGe~gld~~-~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~~~~-----------~~~~~l~~~~~~~~ 179 (291)
T 1bf6_A 112 IDGTELKAGIIAEIGTSEG-KITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGL-----------EQLALLQAHGVDLS 179 (291)
T ss_dssp STTSSCCEEEEEEEECBTT-BCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCSHH-----------HHHHHHHHTTCCGG
T ss_pred cCCcCcceeeEEEEecCCC-CCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCCChH-----------HHHHHHHHcCCCch
Confidence 00112221 122211 1222 4577899999999999999985321100 12333444333333
Q ss_pred CeeEEEeec-CChhhHHHHHhcCCeEEECccchh---h-ccCCccHHHHHHcC--CcEEEccCCCCCC-------CCCCH
Q 012333 276 NLLSAHTVW-VNHTEIGLLSRAGVKVSHCPASAM---R-MLGFAPIKEMLHAD--ICVSLGTDGAPSN-------NRMSI 341 (466)
Q Consensus 276 ~~~~~H~~~-~~~~~~~~~~~~g~~~~~~p~~~~---~-~~~~~~~~~~~~~g--i~~~~gsD~~~~~-------~~~~~ 341 (466)
+.++.|+.. .+.+.++.+++.|..+.+...... . ......++++++.+ -.+.++||++... +....
T Consensus 180 ~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~ 259 (291)
T 1bf6_A 180 RVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDY 259 (291)
T ss_dssp GEEECCCCSSCCHHHHHHHHHTTCEEEECCTTCTTTSCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTH
T ss_pred hEEEECCCCCCCHHHHHHHHHCCCEEEEccCcccCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHH
Confidence 567889854 577888999999998877632100 0 01122466778887 4689999996320 00111
Q ss_pred H-HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 342 V-DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 342 ~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
. ..... .+.. .++|.+++.+++|.||+++||
T Consensus 260 ~~~~~~~-~l~~-------------~g~~~~~~~~~~~~N~~rl~~ 291 (291)
T 1bf6_A 260 LLTTFIP-QLRQ-------------SGFSQADVDVMLRENPSQFFQ 291 (291)
T ss_dssp HHHTHHH-HHHH-------------TTCCHHHHHHHHTHHHHHHCC
T ss_pred HHHHHHH-HHHH-------------cCCCHHHHHHHHHHhHHHHhC
Confidence 1 11111 1111 149999999999999999985
No 73
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=99.07 E-value=3.3e-08 Score=91.70 Aligned_cols=230 Identities=11% Similarity=0.003 Sum_probs=123.5
Q ss_pred HHHHHHHHhcCceeeeecCcc----CHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHH--hc
Q 012333 128 LLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK--HH 201 (466)
Q Consensus 128 ~~~~~~~~~~GvTtv~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 201 (466)
...+..+.+.|||++++.+.. ......+..+..+++++...++.... ....+..... .++..+.++. ..
T Consensus 50 ~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~hp~~--~~~~~~~~~~---~~~l~~~~~~~~~~ 124 (314)
T 2vc7_A 50 VNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGIYIYI--DLPFYFLNRS---IDEIADLFIHDIKE 124 (314)
T ss_dssp HHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEBCCSS--CCCGGGTTCC---HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEeecCCCC--CCchhhhccC---HHHHHHHHHHHHHh
Confidence 334567889999999997733 35566667777787766554443211 0011110011 1222222221 11
Q ss_pred cCCC-----CCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccC--CcchhHHHHhhcCCCCchHHHHhhhccCC
Q 012333 202 HAAD-----GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE--IPYENQVVMDTRKVDHGTVTFLDKIEFLQ 274 (466)
Q Consensus 202 ~~~~-----~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (466)
..+. +.++..+..........+.+++.+++|+++++++.+|+.+ .... ...+.+...+...
T Consensus 125 gige~G~~~g~i~~~ld~~~~~~~q~~~~~~~~~lA~~~~~pv~iH~~~~~~~~~------------~~~~~l~~~~~~~ 192 (314)
T 2vc7_A 125 GIQGTLNKAGFVKIAADEPGITKDVEKVIRAAAIANKETKVPIITHSNAHNNTGL------------EQQRILTEEGVDP 192 (314)
T ss_dssp CSSSSSCCCCSEEEECCTTCSCHHHHHHHHHHHHHHHHHCCCEEEECCTTTTHHH------------HHHHHHHHTTCCG
T ss_pred hcccCCCCCCeEEEeecCCCCCHHHHHHHHHHHHHHHHHCCEEEEeCCCcccChH------------HHHHHHHHcCCCc
Confidence 1111 2233322232222222345777899999999999999862 2110 1334444444333
Q ss_pred CCeeEEEeec-CChhhHHHHHhcCCeEEECccchh---h-ccCCccHHHHHHc--CCcEEEccCCCCCC------CCCCH
Q 012333 275 NNLLSAHTVW-VNHTEIGLLSRAGVKVSHCPASAM---R-MLGFAPIKEMLHA--DICVSLGTDGAPSN------NRMSI 341 (466)
Q Consensus 275 ~~~~~~H~~~-~~~~~~~~~~~~g~~~~~~p~~~~---~-~~~~~~~~~~~~~--gi~~~~gsD~~~~~------~~~~~ 341 (466)
.+.++.|+.. .+.+.++.+.+.|..+.++..... . ......+.++++. .-.+.++||++... +.+..
T Consensus 193 ~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~~p~~~~ 272 (314)
T 2vc7_A 193 GKILIGHLGDTDNIDYIKKIADKGSFIGLDRYGLDLFLPVDKRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKP 272 (314)
T ss_dssp GGEEETTGGGCCCHHHHHHHHHTTCEEEECCTTCTTTSCHHHHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGGCTTSHH
T ss_pred ccEEEECCCCCCCHHHHHHHHHcCCEEEEeCCCcccCCCHHHHHHHHHHHHHcCCCCeEEEcCCccccccccccchhhhh
Confidence 4567889986 468889999999999887732110 0 0111234556665 45679999995210 00000
Q ss_pred H--------HHH-HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 342 V--------DEM-YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 342 ~--------~~~-~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
. ..+ .....+. ..+++.+++.+++|.||+++|+
T Consensus 273 ~g~~~~~~~~~~~~~~~~l~------------~~g~~~e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 273 KLAPRWSITLIFEDTIPFLK------------RNGVNEEVIATIFKENPKKFFS 314 (314)
T ss_dssp HHCTTCSTTHHHHTHHHHHH------------HTTCCHHHHHHHHTHHHHHHTC
T ss_pred cCCCCcCHHHHHHHHHHHHH------------HcCCCHHHHHHHHHHCHHHHhC
Confidence 0 000 0000011 1259999999999999999875
No 74
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.88 E-value=4.1e-07 Score=84.71 Aligned_cols=260 Identities=13% Similarity=0.067 Sum_probs=146.9
Q ss_pred HHHHHHHHHhcCceeeeecC----ccCHHHHHHHHHHh---CCeEEeecccccCCCCC-Cccccc-CChHHHHHHHHHHH
Q 012333 127 TLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELL---GLRACLVQSTMDCGEGL-PASWAV-RTTDDCIQSQKELY 197 (466)
Q Consensus 127 ~~~~~~~~~~~GvTtv~~~~----~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~ 197 (466)
....+..+.+.|++|++++. +.+...+.+..+.. |+++..+.+++...... .+.|.. ...+...+....-+
T Consensus 51 ~~~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~Gv~Iv~~TG~y~~~~~~~~~~~~~~~~~e~l~~~~~~ei 130 (363)
T 3ovg_A 51 SIKEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLGGNVIMSTGFHKAKFYDKYSSWLAVVPTEEIVKMCVAEI 130 (363)
T ss_dssp HHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGTCEEEEEEECCCGGGSCTTTSHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCCcEEEEeCCCCcCcccccCcHhhhcCCHHHHHHHHHHHH
Confidence 34455666789999999964 34556666667765 99998877766432110 112221 12233333333333
Q ss_pred HHhcc-------------CCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchH
Q 012333 198 AKHHH-------------AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV 264 (466)
Q Consensus 198 ~~~~~-------------~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 264 (466)
..-.+ ...+.++..+....+...-.+.++..+++|++.|+++.+|+....... ...
T Consensus 131 ~~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~~~t~~Q~~~f~aq~~~A~e~glPViiH~r~gr~a~-----------d~l 199 (363)
T 3ovg_A 131 EEGMDEYNYNGPVVKRSKAKAGIIKAGTGYGAIDRLELKALEVAARTSILTGCPILVHTQLGTMAL-----------EVA 199 (363)
T ss_dssp HTCCBTTTTSSSCCCBCSCCCCEEEEEEEETBEEHHHHHHHHHHHHHHHHHCCCEEEEEETTCSHH-----------HHH
T ss_pred HhcccccccccccccCCCccCCEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCEEEEeCCCCCCHH-----------HHH
Confidence 22111 112445544444333223345678888999999999999986432111 133
Q ss_pred HHHhhhccCCCCeeEEEeec-CChhhHHHHH-hcCCeEEECccchhh--c--cCCccHHHHHHcCC--cEEEccCCCCCC
Q 012333 265 TFLDKIEFLQNNLLSAHTVW-VNHTEIGLLS-RAGVKVSHCPASAMR--M--LGFAPIKEMLHADI--CVSLGTDGAPSN 336 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~H~~~-~~~~~~~~~~-~~g~~~~~~p~~~~~--~--~~~~~~~~~~~~gi--~~~~gsD~~~~~ 336 (466)
+++...+.-..+.++.|+.. .+.+..+.+. +.|..+.+.-..... . .....++++++.+. ++.++||.+..
T Consensus 200 ~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~~G~yI~f~g~~~~~~~~~~~ra~~l~~lv~~~p~drILleTDap~~- 278 (363)
T 3ovg_A 200 KHLIGFGANPDKIQISHLNKNPDKYYYEKVIKETGVTLCFDGPDRVKYYPDSLLAENIKYLVDKGLQKHITLSLDAGRI- 278 (363)
T ss_dssp HHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHHHCCEEEECCTTCTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSG-
T ss_pred HHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHHCCcEEEECCeeccccCChhHHHHHHHHHHHhcCCCeEEEeCCCCCC-
Confidence 45555444334567889884 4566677777 889888766321000 0 11234677788774 58999999721
Q ss_pred CCCCHHHHH------HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCcccccccCCccCEEE
Q 012333 337 NRMSIVDEM------YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 404 (466)
Q Consensus 337 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv 404 (466)
+.+.+.... ....+....... ....++|.+++.++.|.||+++|++. ..+++++|+..+-|+
T Consensus 279 ~~l~~~G~~~g~~~n~p~~l~~~~~~~-----a~~rGis~eei~~it~~Np~rlf~l~-~~~~~~~~~~~~~~~ 346 (363)
T 3ovg_A 279 LYQRNYGLTKGKQTFGLAYLFDRFLPL-----LKQVGVSKEAIFDILVNNPKRVLAFD-EKRNFDPLKVSKEVL 346 (363)
T ss_dssp GGSHHHHHHTTEECCCTHHHHHTHHHH-----HHHHTCCHHHHHHHHTHHHHHHTSCC-CCCCCCGGGSCHHHH
T ss_pred cCCCCCCccCCCCCCCccHHHHHHHHH-----HHHcCCCHHHHHHHHHHHHHHHHCCC-CcCccCcccCCHHHH
Confidence 111111110 000000000000 00125999999999999999999995 569999998765443
No 75
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=98.88 E-value=1.3e-07 Score=88.73 Aligned_cols=224 Identities=14% Similarity=0.111 Sum_probs=133.0
Q ss_pred hHHHHHHHHHHHHHHhcCceeeeec---------CccCHHH--------HHHHHHHhCCeEEeecccccCCCCCCccccc
Q 012333 121 EDSYISTLLCGIELIHSGVTCFAEA---------GGQHVSE--------MAKAVELLGLRACLVQSTMDCGEGLPASWAV 183 (466)
Q Consensus 121 ~~~~~~~~~~~~~~~~~GvTtv~~~---------~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 183 (466)
++.+.-....++.+.+.||..+--. .+-.... +.++....|+..-+-.+.....
T Consensus 92 ed~~r~a~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~~--------- 162 (380)
T 4gxw_A 92 DDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSIDREQ--------- 162 (380)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTS---------
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCCC---------
Confidence 3434444457788999999875321 1122222 2233445676665444333211
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCch
Q 012333 184 RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 263 (466)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~ 263 (466)
....... ..+....+. ....+.+.+.... ...+++...++++.|++.|+++.+|+.+.....
T Consensus 163 -~~e~a~~-~~~~a~~~~--~~~VvG~dL~g~E-~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~------------- 224 (380)
T 4gxw_A 163 -DPDEAVA-IVDWMKANR--ADEVAGIGIDYRE-NDRPPELFWKAYRDARAAGFRTTAHAGEFGMPW------------- 224 (380)
T ss_dssp -CHHHHHH-HHHHHHHTC--CTTBCEEEEESCC-TTCCGGGGHHHHHHHHHTTCEEEEEESCTTCCH-------------
T ss_pred -CHHHHHH-HHHHHHHhC--CCCEEEEeecCCC-CCCCHHHHHHHHHHHHHcCCCeeeeccccCCch-------------
Confidence 1222222 222222222 2234444443322 233445677889999999999999998843211
Q ss_pred HHHHhhhccCCCCeeEEEeecC--ChhhHHHHHhcCCeEEECccchhhccC--------CccHHHHHHcCCcEEEccCCC
Q 012333 264 VTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRMLG--------FAPIKEMLHADICVSLGTDGA 333 (466)
Q Consensus 264 ~~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~~g~~~~~~p~~~~~~~~--------~~~~~~~~~~gi~~~~gsD~~ 333 (466)
..+.+.+..++. ..|.||..+ +++.++++++.++.+.+||.+|..... ..|++.+++.|++++++||.+
T Consensus 225 ~~i~~al~~lga-~RIgHG~~~~~d~~L~~~l~~~~I~lEvCP~SN~~l~~v~~~~~~~~HP~~~l~~~Gv~vtinTDDp 303 (380)
T 4gxw_A 225 RNVETAVDLLHV-DRVDHGYTIVDNPELCARYAERGIVFTVVPTNSYYLRTLPPDQWAERHPMRKMPGLGLKIHPNTDDP 303 (380)
T ss_dssp HHHHHHHHTSCC-SEEEECGGGGGCHHHHHHHHHHTCEEEECTTCHHHHHHSCTTTHHHHCGGGGTGGGTCEEEECCBSH
T ss_pred HHHHHHHHHcCC-cccccceeeccChHHHHHHHHhCceeEECCcchhhhcccccccccccChHHHHHHCCCeEEECCCCc
Confidence 111222222322 348899887 567799999999999999999976521 148999999999999999986
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
.... .++..++..+. .. .+++.++.. .++.|+.+...++
T Consensus 304 ~~f~-t~Ls~Ey~~~~--~~------------~gls~~dl~-~l~~nsi~~sF~~ 342 (380)
T 4gxw_A 304 TLHK-VNPSEAWELMF--SH------------FGFTIADLK-QFMLNGIDGAWVD 342 (380)
T ss_dssp HHHT-CCHHHHHHHHH--HT------------SCCCHHHHH-HHHHHHHHHSSSC
T ss_pred hhhC-CCHHHHHHHHH--HH------------hCcCHHHHH-HHHHHHHHHHcCC
Confidence 4321 24666655432 11 258998865 5567888877764
No 76
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.84 E-value=3.3e-07 Score=82.27 Aligned_cols=137 Identities=11% Similarity=0.044 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEE
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~ 302 (466)
+.+...+++|.++++++.+|+...... ..+++...+. .. ..+.|+..-+.+.++.+.+.|+.+.+
T Consensus 114 ~~f~~~~~~a~~~~~Pv~iH~~~a~~~-------------~~~il~~~~~-~~-~~i~H~~~g~~~~~~~~~~~g~~i~~ 178 (259)
T 1zzm_A 114 WLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDL-PR-TGVVHGFSGSLQQAERFVQLGYKIGV 178 (259)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESCHHH-------------HHHHHHHHCC-TT-CEEETTCCSCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCcEEEEecccHHH-------------HHHHHHhcCC-CC-CEEEEcCCCCHHHHHHHHHCCCEEEE
Confidence 467888999999999999999653211 2334444432 12 23559877677888888889999988
Q ss_pred CccchhhccCCccHHHHHHcC--CcEEEccCCCCCCC------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 012333 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (466)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~g--i~~~~gsD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 374 (466)
.+.... .....++++++.. -++.++||+|...+ ...+..-......+... .++|.+++.
T Consensus 179 ~g~~~~--~~~~~~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~~la~~-----------~g~~~e~~~ 245 (259)
T 1zzm_A 179 GGTITY--PRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCEL-----------RREPADEIA 245 (259)
T ss_dssp CGGGGC--TTTCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHHHHHH-----------CSSCHHHHH
T ss_pred Cceeec--cccHHHHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHHHHHHH-----------HCcCHHHHH
Confidence 754322 1223456666652 46899999973211 00111000111111110 149999999
Q ss_pred HHHhHHHHHHcCC
Q 012333 375 RMATINGAKSVLW 387 (466)
Q Consensus 375 ~~~T~~~A~~lgl 387 (466)
+.+|.|+++++++
T Consensus 246 ~~~~~Na~rl~~l 258 (259)
T 1zzm_A 246 QALLNNTYTLFNV 258 (259)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhCc
Confidence 9999999999987
No 77
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=98.82 E-value=2.6e-06 Score=79.64 Aligned_cols=233 Identities=9% Similarity=0.013 Sum_probs=132.9
Q ss_pred HHHHHHHHHHhcCceeeeecC----ccCHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHH-HHh
Q 012333 126 STLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY-AKH 200 (466)
Q Consensus 126 ~~~~~~~~~~~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 200 (466)
.+...+..+.++|++++++.+ +.+...+.+..+..|++++.+.+++... ..+.+..... .++..+.+ ++.
T Consensus 87 ~~~~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~y~~~--~~P~~~~~~~---~~~L~~~~~~ei 161 (364)
T 3k2g_A 87 LAIAEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYYLAS--SMPETAARLS---ADDIADEIVAEA 161 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBCCGG--GCCGGGGTCC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCccCCC--CCchhhccCC---HHHHHHHHHHHH
Confidence 455667888999999999976 3567777778888898887666554211 1122222111 12222222 221
Q ss_pred cc------CCCCCeEEEEeecccc-cCCHHHHHHHHHHHHHcCCccceeccCC-cchhHHHHhhcCCCCchHHHHhhhcc
Q 012333 201 HH------AADGRIRIWFGIRQIM-NATDRLLLETRDMAREFKTGIHMHVAEI-PYENQVVMDTRKVDHGTVTFLDKIEF 272 (466)
Q Consensus 201 ~~------~~~~~i~~~~~~~~~~-~~~~~~l~~~~~~a~~~~~~v~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (466)
.. ...+.++- ++..... ..-.+.++..+++|++.|+++.+|+... .... ...+++...+.
T Consensus 162 ~~Gi~~~~vkag~IGE-iGld~~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~-----------e~l~iL~e~g~ 229 (364)
T 3k2g_A 162 LEGTDGTDARIGLIGE-IGVSSDFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAH-----------RVLDLVEEEGA 229 (364)
T ss_dssp HTCBTTBSCCCSSEEE-EECCTTCCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHH-----------HHHHHHHHTTC
T ss_pred HhccccCCcceeEEEE-EEcCCCCCHHHHHHHHHHHHHHHHHCCeEEEecCCCCccHH-----------HHHHHHHHcCC
Confidence 11 11122321 2222211 1112356788889999999999998311 1110 12334444433
Q ss_pred CCCCeeEEEeec-C-ChhhHHHHHhcCCeEEECccch---hh---------ccCCccHHHHHHcCC--cEEEccCCCCC-
Q 012333 273 LQNNLLSAHTVW-V-NHTEIGLLSRAGVKVSHCPASA---MR---------MLGFAPIKEMLHADI--CVSLGTDGAPS- 335 (466)
Q Consensus 273 ~~~~~~~~H~~~-~-~~~~~~~~~~~g~~~~~~p~~~---~~---------~~~~~~~~~~~~~gi--~~~~gsD~~~~- 335 (466)
-..+.++.|+.. - +.+....+.+.|..+.+.-... +. ......++++++.|. ++.++||.+..
T Consensus 230 ~~~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~g~gt~~~f~~~~~~~~~d~~ra~~l~~lv~~gp~drilleTD~p~~~ 309 (364)
T 3k2g_A 230 DLRHTVLCHMNPSHMDPVYQATLAQRGAFLEFDMIGMDFFYADQGVQCPSDDEVARAILGLADHGYLDRILLSHDVFVKM 309 (364)
T ss_dssp CGGGEEECCCGGGTTCHHHHHHHHHHTCEEEECCTTCCCEETTTTEECCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGG
T ss_pred CCCceEEECCCCCCCCHHHHHHHHhCCcEEEecCCcccccccccccccccHHHHHHHHHHHHHhCCcccEEEeCCCCCCC
Confidence 334466779983 5 8888999999999887663211 10 011234677778874 68999998621
Q ss_pred ------CCCCCHH-HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 012333 336 ------NNRMSIV-DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (466)
Q Consensus 336 ------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (466)
++..... ....... .. .|+|.+++.++.|.||+++|+++.
T Consensus 310 ~~~~~gg~~~~~l~~~~~~~l-~~-------------~Gis~eei~~~~~~Np~rlf~l~~ 356 (364)
T 3k2g_A 310 MLTRYGGNGYAFVTKHFLPRL-RR-------------HGLDDAALETLMVTNPRRVFDASI 356 (364)
T ss_dssp GSGGGTSCTTSHHHHHHHHHH-HH-------------TTCCHHHHHHHHTHHHHHHHCTTS
T ss_pred CCCCCCCCCcchHHHHHHHHH-HH-------------cCCCHHHHHHHHHHHHHHHhCCCc
Confidence 1111222 1111111 11 259999999999999999999864
No 78
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.81 E-value=1.2e-06 Score=79.30 Aligned_cols=134 Identities=15% Similarity=0.103 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEE
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~ 302 (466)
+.++..+++|+++++++.+|+.....+ ..+++...+ ..+. +.|+..-+.+.++.+.+.|+.+.+
T Consensus 126 ~~f~~~~~la~~~~lPv~iH~~~a~~~-------------~~~il~~~~--~~~~-v~H~~~g~~~~~~~~~~~g~~i~~ 189 (272)
T 2y1h_A 126 QVLIRQIQLAKRLNLPVNVHSRSAGRP-------------TINLLQEQG--AEKV-LLHAFDGRPSVAMEGVRAGYFFSI 189 (272)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTCHHH-------------HHHHHHHTT--CCSE-EEETCCSCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCcHHH-------------HHHHHHhCC--CCCE-EEEccCCCHHHHHHHHHCCCEEEE
Confidence 467788999999999999999653211 223344433 1234 449877677889999999999988
Q ss_pred CccchhhccCCccHHHHHHcC--CcEEEccCCCCCCC------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 012333 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (466)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~g--i~~~~gsD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 374 (466)
.+.... ...++++++.. -.+.++||++...+ ....+...... +.+.. ++|.+++.
T Consensus 190 ~g~~~~----~~~~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~~~--la~~~-----------g~~~e~~~ 252 (272)
T 2y1h_A 190 PPSIIR----SGQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEY--IAQVK-----------GISVEEVI 252 (272)
T ss_dssp CGGGGT----CHHHHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHHHH--HHHHH-----------TSCHHHHH
T ss_pred CCcccC----cHHHHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHHHH--HHHHH-----------CcCHHHHH
Confidence 865531 12356666553 36799999973211 00111111111 11101 48999999
Q ss_pred HHHhHHHHHHcCCCC
Q 012333 375 RMATINGAKSVLWDN 389 (466)
Q Consensus 375 ~~~T~~~A~~lgl~~ 389 (466)
+.++.|+++++++.+
T Consensus 253 ~~~~~N~~~l~~~~~ 267 (272)
T 2y1h_A 253 EVTTQNALKLFPKLR 267 (272)
T ss_dssp HHHHHHHHHHSTTHH
T ss_pred HHHHHHHHHHHHhHH
Confidence 999999999999853
No 79
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=98.81 E-value=1e-06 Score=81.92 Aligned_cols=240 Identities=13% Similarity=0.103 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHHhcCceeeeecC----ccCHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCCh-HHHHHHHHH-
Q 012333 122 DSYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTT-DDCIQSQKE- 195 (466)
Q Consensus 122 ~~~~~~~~~~~~~~~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~- 195 (466)
+........++.+...|+.|++|+. +.+...+.+..+..|+++..+..++......++.+..... ....++..+
T Consensus 80 ~~~~~~~~~l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~is~~tGv~IV~~TG~y~~~~~~p~~~~~~~~~~~~~e~l~~~ 159 (360)
T 3tn4_A 80 ESLRVAVEAAEKMKRHGIQTVVDPTPNDCGRNPAFLRRVAEETGLNIICATGYYYEGEGAPPYFQFRRLLGTAEDDIYDM 159 (360)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEECCCTTTTCCHHHHHHHHHHHCCEEEEEECCCCGGGSCTHHHHHHHHHTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCeEEECCCCCcCcCHHHHHHHHHHcCCCEEEeCccccCcccCCcccchhhhcccCHHHHHHH
Confidence 3344445566778889999999964 3567788888999999998877665432211211110000 001111111
Q ss_pred HHHHhccC------CCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhh
Q 012333 196 LYAKHHHA------ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDK 269 (466)
Q Consensus 196 ~~~~~~~~------~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (466)
.+++..+. ..+.++...........-.+.++..++++++.|+++.+|........+ .+.++.+
T Consensus 160 ~i~Ei~~Gi~~tgikaG~I~~~~~~~~~t~~E~k~frA~a~aa~etG~Pv~iHt~~~~~~~e-----------~l~iL~e 228 (360)
T 3tn4_A 160 FMAELTEGIADTGIKAGVIKLASSKGRITEYEKMFFRAAARAQKETGAVIITHTQEGTMGPE-----------QAAYLLE 228 (360)
T ss_dssp HHHHHHTCSTTSCCCCSEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCEEEEECSTTCCHHH-----------HHHHHHH
T ss_pred HHHHHHhccccCCCcceEEEEEccCCCCCHHHHHHHHHHHHHHHHhCCcEEEEcCcccCCHH-----------HHHHHHH
Confidence 22222111 113333322222222222345788889999999999999865432111 2344455
Q ss_pred hccCCCCeeEEE-eecCChhhHHHHHhcCCeEEECccc-----hhh--ccCCccHHHHHHcCC--cEEEccCCC------
Q 012333 270 IEFLQNNLLSAH-TVWVNHTEIGLLSRAGVKVSHCPAS-----AMR--MLGFAPIKEMLHADI--CVSLGTDGA------ 333 (466)
Q Consensus 270 ~~~~~~~~~~~H-~~~~~~~~~~~~~~~g~~~~~~p~~-----~~~--~~~~~~~~~~~~~gi--~~~~gsD~~------ 333 (466)
.+.-..+.++.| +...+.+..+.+.+.|..+.+.-.. .+. ......++++++.|- ++.+++|..
T Consensus 229 eG~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD~iG~~~~~~~p~d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~ 308 (360)
T 3tn4_A 229 HGADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFDRFGIQGMVGAPTDEERVRTLLALLRDGYEKQIMLSHDTVNVWLGR 308 (360)
T ss_dssp TTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCCSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSS
T ss_pred cCCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEcccccccccCCCChHHHHHHHHHHHHhcCcceEEEecCCCcccccC
Confidence 554445778899 6777778889999999988764211 000 011234677888774 689999972
Q ss_pred CCC-----------CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 012333 334 PSN-----------NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (466)
Q Consensus 334 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 385 (466)
|+. +.+...-.-....+. +.|+|.+++-++++.||+++|
T Consensus 309 py~~p~p~r~~~~~~~y~~i~~~~ip~L~-------------~~Gvs~e~I~~i~~~NP~rlf 358 (360)
T 3tn4_A 309 PFTLPEPFAEMMKNWHVEHLFVNIIPALK-------------NEGIRDEVLEQMFIGNPAALF 358 (360)
T ss_dssp CCCCCHHHHHHTTTCSTTHHHHTHHHHHH-------------HTTCCHHHHHHHHTHHHHHHH
T ss_pred CCCCcccccccCCCCCchhHHHHHHHHHH-------------HcCCCHHHHHHHHHHhHHHHh
Confidence 111 011111110011111 136999999999999999987
No 80
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=98.72 E-value=1.1e-06 Score=81.53 Aligned_cols=242 Identities=16% Similarity=0.115 Sum_probs=136.0
Q ss_pred ChhHHHHHHHHHHHHHHhcCceeeeecC----ccCHHHHHHHHHHhCCeEEeecccccCCCCCC--cccccCChHHHHHH
Q 012333 119 TEEDSYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLP--ASWAVRTTDDCIQS 192 (466)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 192 (466)
...+.+......+..+.+.||+++++.. +.+...+.+..+..|++++...+++......+ +.+... .....++
T Consensus 57 ~~~~~~~~~~~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~~~g~~i~~~tG~hp~~~~~~~~~~~~~~-~~~~~~~ 135 (339)
T 3gtx_A 57 DHAAALASCTETARALLARGIQTVVDATPNGCGRNPAFLREVSEATGLQILCATGFYYEGGGATTYFKFRAS-LGDAESE 135 (339)
T ss_dssp CHHHHHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHCCEEECEECCCCTTTSSCHHHHHHHH-HSCHHHH
T ss_pred chHHHHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHcCCcEEEEcCCCccCccCCcCCccccc-ccCCHHH
Confidence 4456666777788889999999999975 35677777777788888776555543210000 000000 0011233
Q ss_pred HHHHHHH-h-ccCCC-----CCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHH
Q 012333 193 QKELYAK-H-HHAAD-----GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT 265 (466)
Q Consensus 193 ~~~~~~~-~-~~~~~-----~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~ 265 (466)
..+.+.. . ...+. +.+++.+........-.+.++..+++|++.++++.+|+.......+ ..+
T Consensus 136 L~~~~~~e~~~gIg~tg~k~g~IEigld~~~~~~~q~~~f~aq~~lA~~~glPViiH~~~gr~a~~-----------~~~ 204 (339)
T 3gtx_A 136 IYEMMRTEVTEGIAGTGIRAGVIKLASSRDAITPYEQLFFRAAARVQRETGVPIITHTQEGQQGPQ-----------QAE 204 (339)
T ss_dssp HHHHHHHHHHTCSTTSSCCCSEEEEECCSSCCCHHHHHHHHHHHHHHHHHCCCEEEECSTTCCHHH-----------HHH
T ss_pred HHHHHHHHHHhcccccCcccceEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcCHHH-----------HHH
Confidence 3222222 1 11111 2224333333221122345678889999999999999954221111 233
Q ss_pred HHhhhccCCCCeeEEEee-cCChhhHHHHHhcCCeEEECccch--h-----hccCCccHHHHHHcCC--cEEEccCCCCC
Q 012333 266 FLDKIEFLQNNLLSAHTV-WVNHTEIGLLSRAGVKVSHCPASA--M-----RMLGFAPIKEMLHADI--CVSLGTDGAPS 335 (466)
Q Consensus 266 ~~~~~~~~~~~~~~~H~~-~~~~~~~~~~~~~g~~~~~~p~~~--~-----~~~~~~~~~~~~~~gi--~~~~gsD~~~~ 335 (466)
++...+.-..+.++.|+. .-+.++.+.+.+.|..+.+.-... + .......++++++.+. .+.++||.+..
T Consensus 205 iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~~G~~i~~~g~~t~~~~~~p~~~~~~~~l~~li~~~~~drilleTD~p~~ 284 (339)
T 3gtx_A 205 LLTSLGADPARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAERLSVLTTLLGEGYADRLLLSHDSIWH 284 (339)
T ss_dssp HHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCSSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEE
T ss_pred HHHHcCCCcccEEEEccCCCCCHHHHHHHHHcCcEEEEccCccccccCCCchHHHHHHHHHHHHhcCCCeEEEecCCCcc
Confidence 444444333455678998 467888999999999888754211 0 0011234677777764 58999998731
Q ss_pred ---CC--------------CCCHH-HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 336 ---NN--------------RMSIV-DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 336 ---~~--------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
.+ ..... ...... .. ..++|.+++.++.|.||+++|+
T Consensus 285 ~~~~P~~~p~~~~~~~g~n~p~~l~~~~~~~-~~-------------~~Gis~e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 285 WLGRPPAIPEAALPAVKDWHPLHISDDILPD-LR-------------RRGITEEQVGQMTVGNPARLFG 339 (339)
T ss_dssp ESSSCCCCCGGGHHHHHTCSTTHHHHTHHHH-HH-------------HTTCCHHHHHHHHTHHHHHHHC
T ss_pred ccCCcccccccccccCCCCCchhHHHHHHHH-HH-------------HcCCCHHHHHHHHHHHHHHHhC
Confidence 00 00101 111111 11 1259999999999999999985
No 81
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=98.68 E-value=2.6e-08 Score=99.47 Aligned_cols=128 Identities=19% Similarity=0.171 Sum_probs=96.1
Q ss_pred HHHHHH-cCC---ccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhh--HHHHHhcCCeEEE
Q 012333 229 RDMARE-FKT---GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE--IGLLSRAGVKVSH 302 (466)
Q Consensus 229 ~~~a~~-~~~---~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~--~~~~~~~g~~~~~ 302 (466)
+..+++ .|+ ++++|+.+.... ..+.+.+ ++.+. +.||+++.++. ++++++.++.+.+
T Consensus 504 Ln~ar~~~Gl~~i~~t~HaGE~~~~--------------e~l~~al--Lg~~R-IgHGv~l~edp~Li~lla~~~I~vev 566 (701)
T 2a3l_A 504 LNKLRESKGMTTITLRPHSGEAGDI--------------DHLAATF--LTCHS-IAHGINLRKSPVLQYLYYLAQIGLAM 566 (701)
T ss_dssp HHHHHTTTTCCCCEECCCCSSSSCT--------------HHHHHHH--HHCSS-CSCCGGGGGCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHcCCCCCCcccccCCCCCH--------------HHHHHHh--cCCCe-EEEEeecccCHHHHHHHHHcCCcEEE
Confidence 345564 577 789999886421 1111112 33333 69999998766 8999999999999
Q ss_pred Cccchhhc-cCCc--cHHHHHHcCCcEEEccCCCCCCCC--CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 012333 303 CPASAMRM-LGFA--PIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377 (466)
Q Consensus 303 ~p~~~~~~-~~~~--~~~~~~~~gi~~~~gsD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~ 377 (466)
||.+++.. .+.. |+..++++|++|++|||.+..... .+++++++.+.... +++..++.++
T Consensus 567 CP~SN~kl~~~~~~HPi~~ll~~Gv~VsLgTDdp~~~~~t~~dL~~Ey~~aa~~~--------------~ls~~dl~~l- 631 (701)
T 2a3l_A 567 SPLSNNSLFLDYHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVW--------------KLSACDLCEI- 631 (701)
T ss_dssp CHHHHTTTTCCSTTCSHHHHHHTTCCEEECCBCHHHHCCSSSHHHHHHHHHHHHH--------------TCCHHHHHHH-
T ss_pred CccchhhhccCchHhHHHHHHHCCCcEEEeCCCccccCCCCcCHHHHHHHHHHHc--------------CCCHHHHHHH-
Confidence 99999866 4555 999999999999999999765433 46889998876554 3889996666
Q ss_pred hHHHHHHcCCC
Q 012333 378 TINGAKSVLWD 388 (466)
Q Consensus 378 T~~~A~~lgl~ 388 (466)
|.|++++.+++
T Consensus 632 a~Ns~~asfl~ 642 (701)
T 2a3l_A 632 ARNSVYQSGFS 642 (701)
T ss_dssp HHHHHHHSCCC
T ss_pred HHHHHHHhCCC
Confidence 89999999985
No 82
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.68 E-value=1.1e-06 Score=79.08 Aligned_cols=137 Identities=12% Similarity=-0.006 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEE
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~ 302 (466)
+.+...+++|+++++++.+|+...... ..+++...+....+. +.|+..-+.+.++.+.+.|+.+.+
T Consensus 112 ~~f~~~l~~a~~~~lpv~iH~~~a~~~-------------~~~il~~~~~~~~~~-v~H~~~g~~~~~~~~~~~g~yi~~ 177 (264)
T 1xwy_A 112 RAFVAQLRIAADLNMPVFMHCRDAHER-------------FMTLLEPWLDKLPGA-VLHCFTGTREEMQACVAHGIYIGI 177 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHGGGGGGSSCE-EECSCCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCcEEEEcCCchHH-------------HHHHHHhcCCCCCcE-EEEccCCCHHHHHHHHHCCeEEEE
Confidence 357788999999999999998643211 223333332112233 459866677888888889999888
Q ss_pred CccchhhccCCccHHHHHHcC--CcEEEccCCCCCCCC-----C-----C--HHHHHHHHHHHhcccccccCCCCCCCCC
Q 012333 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNNR-----M-----S--IVDEMYLASLINKGREVFANGTTDPAAL 368 (466)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~g--i~~~~gsD~~~~~~~-----~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l 368 (466)
...... ......++.+++.. -++.++||+|...+. . . .+..... .+... .++
T Consensus 178 ~g~~~~-~~~~~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~--~~a~~-----------~g~ 243 (264)
T 1xwy_A 178 TGWVCD-ERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQ--RIAHW-----------RGE 243 (264)
T ss_dssp CGGGGC-TTTSHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHH--HHHHH-----------HTC
T ss_pred CccccC-CcCcHHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHHH--HHHHH-----------HCc
Confidence 753220 11123455666652 268999999642111 0 0 1111111 11110 149
Q ss_pred CHHHHHHHHhHHHHHHcCC
Q 012333 369 PAETVLRMATINGAKSVLW 387 (466)
Q Consensus 369 s~~~al~~~T~~~A~~lgl 387 (466)
|.+++.+.++.|+++++++
T Consensus 244 ~~e~~~~~~~~Na~rl~~l 262 (264)
T 1xwy_A 244 DAAWLAATTDANVKTLFGI 262 (264)
T ss_dssp CHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHhCc
Confidence 9999999999999999987
No 83
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.67 E-value=4.8e-06 Score=75.19 Aligned_cols=142 Identities=8% Similarity=-0.054 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEE
Q 012333 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (466)
Q Consensus 222 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~ 301 (466)
.+.+++.+++|+++++++.+|+.....+ ..+++........ ..+.|+..-+.++++.+.+.|..+.
T Consensus 113 ~~~F~~ql~lA~e~~lPv~iH~r~a~~~-------------~l~il~~~~~~~~-~~V~H~fsG~~e~a~~~l~~G~yis 178 (287)
T 3rcm_A 113 EKALEAQLTLAAQLRLPVFLHERDASER-------------LLAILKDYRDHLT-GAVVHCFTGEREALFAYLDLDLHIG 178 (287)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHTTGGGCS-CEEECSCCCCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcHHH-------------HHHHHHHcCCCCC-eEEEEeCCCCHHHHHHHHHCCcEEE
Confidence 4567888999999999999999764221 2233333322111 2466987778899999999999998
Q ss_pred ECccchhhccCCccHHHHHHcC--CcEEEccCCCCCCC----------CCCHHHHHHHHHHHhcccccccCCCCCCCCCC
Q 012333 302 HCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN----------RMSIVDEMYLASLINKGREVFANGTTDPAALP 369 (466)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~g--i~~~~gsD~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls 369 (466)
+....... .....++++++.- -.+.+.||.|-..+ .-.+..-......+...+ +++
T Consensus 179 ~~g~i~~~-k~~~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v~~~lA~~~-----------g~s 246 (287)
T 3rcm_A 179 ITGWICDE-RRGTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREVALHR-----------GES 246 (287)
T ss_dssp ECGGGGCT-TTCGGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHHHHHHHHHH-----------TSC
T ss_pred ECchhccc-cCHHHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHHHHHHHHHh-----------CcC
Confidence 88543321 1123455665542 35889999863211 001111111111111111 499
Q ss_pred HHHHHHHHhHHHHHHcCCCC
Q 012333 370 AETVLRMATINGAKSVLWDN 389 (466)
Q Consensus 370 ~~~al~~~T~~~A~~lgl~~ 389 (466)
.+++.+.+|.|+++++|+..
T Consensus 247 ~eev~~~~~~N~~rlf~l~~ 266 (287)
T 3rcm_A 247 AEHTAAHTTATARDFFQLPA 266 (287)
T ss_dssp HHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHCCCh
Confidence 99999999999999999853
No 84
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=98.61 E-value=3.9e-06 Score=78.46 Aligned_cols=230 Identities=12% Similarity=0.086 Sum_probs=130.0
Q ss_pred HHHHHHHHHHhcCceeeeecC-----ccCHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHH-HH
Q 012333 126 STLLCGIELIHSGVTCFAEAG-----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY-AK 199 (466)
Q Consensus 126 ~~~~~~~~~~~~GvTtv~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 199 (466)
.+...+..+.++||+++++.+ +.+...+.+..+..|++++...+++... ..+.+..... ++..+.+ ++
T Consensus 76 ~~~~el~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~~~gi~i~~~tG~y~~~--~~P~~~~~~~----~~L~~~~~~e 149 (365)
T 3rhg_A 76 DVIFELNNFKELGGKTIVDATGSSSIGRDIRKLKQVAELTGINVVASSGLYIEK--FEGKRLADDI----DAMAKMIDDE 149 (365)
T ss_dssp HHHHHHHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHHHHCCEEECEECCCCHH--HHGGGGGSCH----HHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHHHHCCcEEEEeCccCCC--CCchhhcCCH----HHHHHHHHHH
Confidence 444566788999999999987 3466777777788898876655543111 0022222211 2222222 22
Q ss_pred hccC------CCCCeEEEEeecccccCCH---HHHHHHHHHHHHc-CCccceec-cCCcchhHHHHhhcCCCCchHHHHh
Q 012333 200 HHHA------ADGRIRIWFGIRQIMNATD---RLLLETRDMAREF-KTGIHMHV-AEIPYENQVVMDTRKVDHGTVTFLD 268 (466)
Q Consensus 200 ~~~~------~~~~i~~~~~~~~~~~~~~---~~l~~~~~~a~~~-~~~v~~H~-~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (466)
.... ..+.++- ++... ..++ +.++..++++++. |+++.+|+ .......+ ....+.
T Consensus 150 i~~gi~~t~vkag~IGE-iGld~--~~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e-----------~l~iL~ 215 (365)
T 3rhg_A 150 LNIGIDGTDIRAGMIGE-IGVSP--FFTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRRGDE-----------VLDILL 215 (365)
T ss_dssp HHTCSTTSSCCCCEEEE-EECCT--TCCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCCHHH-----------HHHHHT
T ss_pred HHhccccCCceeEEEEE-EEcCC--CCCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcCHHH-----------HHHHHH
Confidence 2111 0111211 22222 2233 4467788899999 99999997 42111110 233333
Q ss_pred hh-ccCCCCeeEEEee-c-CChhhHHHHHhcCCeEEECccc---hhh--------ccCCccHHHHHHcCC--cEEEccCC
Q 012333 269 KI-EFLQNNLLSAHTV-W-VNHTEIGLLSRAGVKVSHCPAS---AMR--------MLGFAPIKEMLHADI--CVSLGTDG 332 (466)
Q Consensus 269 ~~-~~~~~~~~~~H~~-~-~~~~~~~~~~~~g~~~~~~p~~---~~~--------~~~~~~~~~~~~~gi--~~~~gsD~ 332 (466)
.. +.-..+.++.|+. . -+.+....+.++|..+.+.-.. .+. ......++++++.|. .+.++||.
T Consensus 216 e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~g~g~~~tf~~~~~~~~d~~~a~~l~~li~~g~~drilleTD~ 295 (365)
T 3rhg_A 216 TEMGCDPAKISLAHSDPSGKDIDYQCKMLDRGVWLEFDMIGLDISFPKEGAAPSVMDTVEAVATLIERGYGNQIVLSHDV 295 (365)
T ss_dssp TTTCCCGGGEEESCCGGGTTCHHHHHHHHHTTCEEEECCTTCCCBCSSSCBCCCHHHHHHHHHHHHHTTCGGGEEECCCC
T ss_pred hccCCCCCceEEecCCCCCCCHHHHHHHHhCCCEEEecCCCccccccccccccchHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 33 2222345678998 4 6788899999999998776321 000 011234677788874 58899998
Q ss_pred CCCC-------CCCCHH-HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 012333 333 APSN-------NRMSIV-DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (466)
Q Consensus 333 ~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (466)
+... +..... ...... .. ..|+|.+++.++.|.||+++|++..
T Consensus 296 p~l~~~~~~G~~~~~~l~~~~~~~-~~-------------~~Gis~e~i~~~~~~Np~rlf~l~~ 346 (365)
T 3rhg_A 296 FLKQMWAKNGGNGWGFVPNVFLSL-LA-------------QRGIDKTIIDKLCIDNPANLLAAEN 346 (365)
T ss_dssp CSGGGSGGGTSCTTTHHHHTHHHH-HH-------------HTTCCHHHHHHHTTHHHHHHHHSCC
T ss_pred CCCCCCCcCCCCCchhHHHHHHHH-HH-------------HcCCCHHHHHHHHHHHHHHHHCCCC
Confidence 6311 111111 111111 11 1259999999999999999999853
No 85
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=98.59 E-value=6.8e-06 Score=75.68 Aligned_cols=241 Identities=14% Similarity=0.139 Sum_probs=133.6
Q ss_pred HHHHHHHHHHhcCceeeeecC----ccCHHHHHHHHHHhCCeEEeecccccCCC---CCC-------------cccccC-
Q 012333 126 STLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGE---GLP-------------ASWAVR- 184 (466)
Q Consensus 126 ~~~~~~~~~~~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~-------------~~~~~~- 184 (466)
.....+..+.+.|++|++|+. +.+...+.+..+..|+++..+.+++.... ++. +.|...
T Consensus 47 ~~~~el~~~~~~G~~tiVd~t~~~~gR~~~~l~~is~~tgv~iv~~TG~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (330)
T 3pnz_A 47 KSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIENT 126 (330)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGCBCHHHHHHHHHHHCCEEEEEEECCCGGGGGSBCCGGGHHHHCSCSBHHHHHHTS
T ss_pred HHHHHHHHHHHhCCCEEEECCCCccccCHHHHHHHHHHhCCEEEEeCCCCccccccccccccccccccccccCchhhccC
Confidence 444566778889999999964 35677778888899999988777664211 011 111111
Q ss_pred ChHHHHHHHHHHHHHhccCCC---CCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCC
Q 012333 185 TTDDCIQSQKELYAKHHHAAD---GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261 (466)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~ 261 (466)
..++..+....-+.+...... +.+++.+....+...-.+.++..+++|++.|+++.+|+.......
T Consensus 127 ~~e~l~~~~~~ei~~Gi~~t~vkaGvIEiGld~~~~~~~q~~~f~aq~~~A~~~glPViiH~r~g~~a~----------- 195 (330)
T 3pnz_A 127 TTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVARAHHETKAPIHSHTEAGTMAL----------- 195 (330)
T ss_dssp CHHHHHHHHHHHHHTCSTTSSCCEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCCHH-----------
T ss_pred CHHHHHHHHHHHHHhhCCCcCcCcCeEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcChH-----------
Confidence 122222222222222111100 112322222222222234577888999999999999986421111
Q ss_pred chHHHHhhhccCCCCeeEEEee-cCChhhHHHHHhcCCeEEECccchhh----ccCCccHHHHHHcCC--cEEEccCCCC
Q 012333 262 GTVTFLDKIEFLQNNLLSAHTV-WVNHTEIGLLSRAGVKVSHCPASAMR----MLGFAPIKEMLHADI--CVSLGTDGAP 334 (466)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~H~~-~~~~~~~~~~~~~g~~~~~~p~~~~~----~~~~~~~~~~~~~gi--~~~~gsD~~~ 334 (466)
...+++...+.-..+.++.|+. .-+.+....+.+.|..+.+.-..... ......++.+++.|. ++.++||++.
T Consensus 196 ~~l~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~~G~~i~~~g~~t~~~~~~~~~~~~l~~lv~~g~~drilleTD~p~ 275 (330)
T 3pnz_A 196 EQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGIAKIKYAPESARIAAILYLVSEGFEDQILVSGDTAR 275 (330)
T ss_dssp HHHHHHHHTTCCGGGEEETTGGGSCCHHHHHHHHTTTCEEEECCTTCTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred HHHHHHHHcCCCCCeEEEecCCCCCCHHHHHHHHHcCcEEEEccCcccCCCChHHHHHHHHHHHHcCCCCeEEEeCCCCC
Confidence 0233444443333456677986 55678888899999988776321100 011224677777774 6899999872
Q ss_pred C--------CCCCCHH-HHHHHHHHHhcccccccCCCCCCCCCCHHH-HHHHHhHHHHHHcCC
Q 012333 335 S--------NNRMSIV-DEMYLASLINKGREVFANGTTDPAALPAET-VLRMATINGAKSVLW 387 (466)
Q Consensus 335 ~--------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~-al~~~T~~~A~~lgl 387 (466)
. .+.+... ...... +... . ...|+|.++ +.++.|.||+++|++
T Consensus 276 ~~~~~~~G~~~~~~~~~~~~~~~-l~~~---a------~~~Gis~ee~i~~~t~~Np~rlf~l 328 (330)
T 3pnz_A 276 KTYYKHYGHGPGLEYIAKKWVPR-FIDE---A------NEKGFDGEKLVKKFFVDNPARCFTF 328 (330)
T ss_dssp GGGSHHHHCCSTTTHHHHTHHHH-HHHH---H------HHTTSCHHHHHHHHHTHHHHHHSSC
T ss_pred CCCCCccCCCCCcchHHHHHHHH-HHHH---H------HHcCCCHHHHHHHHHHHhHHHHhcC
Confidence 1 1111111 111111 0000 0 012599998 999999999999997
No 86
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=98.52 E-value=2.1e-05 Score=70.57 Aligned_cols=137 Identities=13% Similarity=0.112 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEE
Q 012333 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (466)
Q Consensus 222 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~ 301 (466)
.+.+...+++|.++++++.+|+...... ..+.+...+....+.+ .|+...+.+.++.+.+.|+.+.
T Consensus 110 ~~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~~~p~~~~v-~H~~~~~~~~~~~~~~~g~~~~ 175 (265)
T 1yix_A 110 QESFIHHIQIGRELNKPVIVHTRDARAD-------------TLAILREEKVTDCGGV-LHCFTEDRETAGKLLDLGFYIS 175 (265)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHTTGGGTCEE-ETTCCSCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCchHH-------------HHHHHHhcCCCCCCEE-EEcCCCCHHHHHHHHHCCcEEE
Confidence 4567888999999999999999753221 2233333222222344 4988778888999988999998
Q ss_pred ECccchhhccCCccHHHHHHc-C-CcEEEccCCCCCCC---------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 012333 302 HCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN---------RMSIVDEMYLASLINKGREVFANGTTDPAALPA 370 (466)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 370 (466)
+++.... .....++.+++. + -.+.++||++.... ...+...+.. +.+. .++|.
T Consensus 176 ~sg~~~~--~~~~~~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~~~l~~~~~~---l~~~-----------~~~~~ 239 (265)
T 1yix_A 176 FSGIVTF--RNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEY---MAVL-----------KGVAV 239 (265)
T ss_dssp ECGGGGS--TTCHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHHH---HHHH-----------HTSCH
T ss_pred ECCcccc--CchHHHHHHHHhCChHHEEEecCCCCCCCcccCCCCCchHHHHHHHHH---HHHH-----------hCcCH
Confidence 8864322 112345566665 4 46899999974211 0111122211 1110 14899
Q ss_pred HHHHHHHhHHHHHHcCCC
Q 012333 371 ETVLRMATINGAKSVLWD 388 (466)
Q Consensus 371 ~~al~~~T~~~A~~lgl~ 388 (466)
++..++++.|++++++++
T Consensus 240 ~~~~~i~~~Na~rl~~l~ 257 (265)
T 1yix_A 240 EELAQVTTDNFARLFHID 257 (265)
T ss_dssp HHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhCcC
Confidence 999999999999999984
No 87
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=98.38 E-value=5.2e-06 Score=80.33 Aligned_cols=132 Identities=11% Similarity=0.076 Sum_probs=86.2
Q ss_pred CCeEEEEeecccccCCHHHHHHHHHH--HHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEee
Q 012333 206 GRIRIWFGIRQIMNATDRLLLETRDM--AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV 283 (466)
Q Consensus 206 ~~i~~~~~~~~~~~~~~~~l~~~~~~--a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 283 (466)
..+.+.+........+.+.+.++++. +++.|+++.+|+.+..... ......+.+.+ .++. ..+.||+
T Consensus 292 ~VvG~DLaG~E~~g~p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g---------~~~~~~i~~Al-~Lga-~RIgHGv 360 (508)
T 3lgd_A 292 VVAGFDLVGHEDTGHSLHDYKEALMIPAKDGVKLPYFFHAGETDWQG---------TSIDRNILDAL-MLNT-TRIGHGF 360 (508)
T ss_dssp TEEEEEEESCTTTSCCTGGGHHHHTHHHHTTCCCCBCCEECCSSCCS---------STTTTHHHHHH-HTTC-SSEEECT
T ss_pred ceEEeccCCCCCCCCCHHHHHHHHHHHHHHHcCCceeeecccccCCC---------CCcHHHHHHHH-hcCC-ceeeeeE
Confidence 34444343322223345566777777 7889999999998864211 00011222333 2332 3489999
Q ss_pred cCC--hhhHHHHHhcCCeEEECccchhhccC-----CccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHH
Q 012333 284 WVN--HTEIGLLSRAGVKVSHCPASAMRMLG-----FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLA 348 (466)
Q Consensus 284 ~~~--~~~~~~~~~~g~~~~~~p~~~~~~~~-----~~~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~ 348 (466)
.+. ++.++++++.++.+.+||.+|..... ..|++.++++|++++++||.+.......+..+...+
T Consensus 361 ~l~~dp~l~~~l~~~~I~levCP~SN~~l~~v~~~~~hP~~~ll~~Gv~V~l~TDdp~~f~~~~Ls~Ey~~a 432 (508)
T 3lgd_A 361 ALSKHPAVRTYSWKKDIPIEVCPISNQVLKLVSDLRNHPVATLMATGHPMVISSDDPAMFGAKGLSYDFYEV 432 (508)
T ss_dssp TGGGCHHHHHHHHHTTCCEEECHHHHHHTTSCSSGGGCTHHHHHHTTCCEEECCBSHHHHTCCTTHHHHHHH
T ss_pred ecCccHHHHHHHHhcCCeEEECcchHHHhCCCCCcccChHHHHHHCCCcEEEcCCCccccCCCchHHHHHHH
Confidence 986 78899999999999999999987732 359999999999999999986432221244554433
No 88
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.30 E-value=1.5e-06 Score=76.80 Aligned_cols=136 Identities=15% Similarity=0.013 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHcCCccc-eeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEE
Q 012333 223 RLLLETRDMAREFKTGIH-MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~-~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~ 301 (466)
+.+++.+++|+++++|+. +|+-....+ ..+++..... ....+.|+..-+.++++.+.+.|..+.
T Consensus 104 ~~F~~ql~lA~e~~lPviSiH~r~a~~~-------------~~~il~~~~~--~~~~v~H~fsG~~e~a~~~l~~G~yis 168 (254)
T 3gg7_A 104 AVFQHILRRCEDHGGRILSIHSRRAESE-------------VLNCLEANPR--SGTPILHWYSGSVTELRRAISLGCWFS 168 (254)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHH-------------HHHHHHHCGG--GEEEEEETCCSCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEcCCcHHH-------------HHHHHHHcCC--CCcEEEEeCCCCHHHHHHHHcCCcEEE
Confidence 457788999999999997 999764321 2333333321 113466988888899999999999998
Q ss_pred ECccchhhccCCccHHHHHHc-C-CcEEEccCCCCCCC---CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 012333 302 HCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (466)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 376 (466)
+.+... ....++++++. + -.+.+.||+|-... .-.+..-......+...+ +++.+++.+.
T Consensus 169 ~~g~~~----~~~~~~~~v~~ip~drlLlETD~P~~~~rg~~n~P~~v~~v~~~iA~~~-----------g~~~ee~~~~ 233 (254)
T 3gg7_A 169 VGPTMV----RTQKGAALIRSMPRDRVLTETDGPFLELDGQAALPWDVKSVVEGLSKIW-----------QIPASEVERI 233 (254)
T ss_dssp ECHHHH----TSHHHHHHHHHSCGGGEEECCCTTTSEETTEECCGGGHHHHHHHHHHHH-----------TSCHHHHHHH
T ss_pred ECcccC----chHHHHHHHHHcCCCeEEEeCCCCccccCCCCCCHHHHHHHHHHHHHHh-----------CcCHHHHHHH
Confidence 876543 11234455444 2 25889999973210 001111111111111111 4899999999
Q ss_pred HhHHHHHHcCCC
Q 012333 377 ATINGAKSVLWD 388 (466)
Q Consensus 377 ~T~~~A~~lgl~ 388 (466)
.+.|+.+++++.
T Consensus 234 ~~~N~~~lf~~~ 245 (254)
T 3gg7_A 234 VKENVSRLLGTV 245 (254)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHCCC
Confidence 999999999983
No 89
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=98.29 E-value=5.9e-06 Score=75.55 Aligned_cols=137 Identities=7% Similarity=0.008 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHH-cCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEE
Q 012333 223 RLLLETRDMARE-FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (466)
Q Consensus 223 ~~l~~~~~~a~~-~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~ 301 (466)
+.+++.+++|++ +++|+.+|+-+...+ ..+++........ ..+.|+..-+.++++.+.+.|..+.
T Consensus 154 ~~F~~ql~lA~e~~~lPviiH~r~A~~d-------------~l~iL~~~~~~~~-~gViH~FsGs~e~a~~~l~lG~yis 219 (325)
T 3ipw_A 154 SGYRTLSILHQKYPYLPFFFHCRKSWSD-------------LCQLNKELGYNGC-KGVVHCFDGTEEEMNQILNEGWDIG 219 (325)
T ss_dssp HHHHHTHHHHHHCTTCCEEEEEESCHHH-------------HHHHHHHTTCTTS-CEEECSCCCCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhhCCeEEEEeCchHHH-------------HHHHHHhcCCCCC-cEEEEECCCCHHHHHHHHhcCcEEe
Confidence 457788999999 999999999764322 2334444332112 2466999889999999999999999
Q ss_pred ECccchhhccCCccHHHHHHc-C-CcEEEccCCCCCC------------------------------CCCCHHHHHHHHH
Q 012333 302 HCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSN------------------------------NRMSIVDEMYLAS 349 (466)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~------------------------------~~~~~~~~~~~~~ 349 (466)
+.... ++ ..... ++++. . -.+.+-||+|-.. ..-.+..-...+.
T Consensus 220 ~~G~~-~k--~~~~~-~~v~~iPldrlLlETDaP~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~g~rNeP~~v~~v~~ 295 (325)
T 3ipw_A 220 VTGNS-LQ--SIELL-NVMKQIPIERLHIETDCPYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYVQRRNEPSNIIDIAI 295 (325)
T ss_dssp ECSGG-GS--SHHHH-HHHTTSCGGGEEECCCTTSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCBTTCCCGGGHHHHHH
T ss_pred eCccc-cC--cHHHH-HHHHhCCcccEEEeCCCccccccccccchhcccccCccccccccccccccCCcCcHHHHHHHHH
Confidence 88752 21 11112 33322 1 2478889986321 0001111111111
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
.+...+ +++.+++.+..+.|+.+++++.
T Consensus 296 ~iA~l~-----------g~~~eeva~~t~~Na~~lF~~~ 323 (325)
T 3ipw_A 296 IMSSIK-----------HISLFEFVNKVYSNSMNMYFPT 323 (325)
T ss_dssp HHHHHH-----------TCCHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHhh-----------CcCHHHHHHHHHHHHHHHhCcC
Confidence 121111 4999999999999999999874
No 90
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=98.22 E-value=5.7e-05 Score=67.75 Aligned_cols=140 Identities=14% Similarity=0.055 Sum_probs=82.3
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHh-cCCe
Q 012333 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR-AGVK 299 (466)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~-~g~~ 299 (466)
..+.+...+++|.++|+++.+|+...... ..+++........+. +.|+..-+.+.+..+.+ .|+.
T Consensus 107 ~~~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~p~~~~~~-i~H~~~g~~~~~~~~l~~~~~y 172 (265)
T 2gzx_A 107 QKEVFRKQIALAKRLKLPIIIHNREATQD-------------CIDILLEEHAEEVGG-IMHSFSGSPEIADIVTNKLNFY 172 (265)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHTTGGGTCE-EETTCCSCHHHHHHHHHTSCCE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecccHHH-------------HHHHHHhcCCCCCcE-EEEcCCCCHHHHHHHHHHCCce
Confidence 34567889999999999999998653211 223334333112233 45766556667777666 7888
Q ss_pred EEECccchhhccCCccHHHHHHc-C-CcEEEccCCCCCCCC-------C-CHHHHHHHHHHHhcccccccCCCCCCCCCC
Q 012333 300 VSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNR-------M-SIVDEMYLASLINKGREVFANGTTDPAALP 369 (466)
Q Consensus 300 ~~~~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls 369 (466)
+.+...... .....++.+++. | -++.+|||+|..... . ......... +... .++|
T Consensus 173 ~~~sg~~~~--~~~~~~~~~i~~~~~dril~gSD~P~~~~~~~~g~~~~~~~~~~~~~~--l~~~-----------~~~~ 237 (265)
T 2gzx_A 173 ISLGGPVTF--KNAKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQ--IAEL-----------KGLS 237 (265)
T ss_dssp EEECGGGGC--SSCCHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHHHH--HHHH-----------TTCC
T ss_pred EEecceeec--CCcHHHHHHHHhCChhhEEEccCCCCCCCcccCCCCCChHHHHHHHHH--HHHH-----------hCCC
Confidence 887744322 112345666665 3 479999999743210 0 111111111 1110 1489
Q ss_pred HHHHHHHHhHHHHHHcCCCC
Q 012333 370 AETVLRMATINGAKSVLWDN 389 (466)
Q Consensus 370 ~~~al~~~T~~~A~~lgl~~ 389 (466)
.++.-+.++.|+++++++.+
T Consensus 238 ~~~~~~i~~~Na~rl~~~~~ 257 (265)
T 2gzx_A 238 YEEVCEQTTKNAEKLFNLNS 257 (265)
T ss_dssp HHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHhCCch
Confidence 99999999999999999853
No 91
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=98.21 E-value=7.9e-06 Score=74.86 Aligned_cols=142 Identities=11% Similarity=0.009 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEEE
Q 012333 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (466)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~ 302 (466)
+.++..+++|+++++++.+|+.....+ ..+++..... .....+.|+..-+.+.++.+.+.|+.+.+
T Consensus 127 ~~f~~ql~lA~~~~lPv~iH~r~a~~~-------------~~~il~~~~~-~~~~~i~H~f~g~~~~~~~~l~~g~yi~~ 192 (301)
T 2xio_A 127 KYFEKQFELSEQTKLPMFLHCRNSHAE-------------FLDITKRNRD-RCVGGVVHSFDGTKEAAAALIDLDLYIGF 192 (301)
T ss_dssp HHHHHTHHHHHHHCCCEEEEEESCHHH-------------HHHHHHHTGG-GSSCEEETTCCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCcEEEEecCchHH-------------HHHHHHhccC-CCCcEEEEccCCCHHHHHHHHhcCcEEEE
Confidence 467788899999999999999653221 2233333221 11245789877788888999999999988
Q ss_pred CccchhhccCCccHHHHHHcC--CcEEEccCCCCCC---------------C-------------CCCHHHHHHHHHHHh
Q 012333 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSN---------------N-------------RMSIVDEMYLASLIN 352 (466)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~g--i~~~~gsD~~~~~---------------~-------------~~~~~~~~~~~~~~~ 352 (466)
.... +. . ....++++.. -++.++||+|-.. + ...+..-......+.
T Consensus 193 ~g~~-~~--~-~~~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~~~~~n~p~~v~~~~~~ia 268 (301)
T 2xio_A 193 NGCS-LK--T-EANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEIMS 268 (301)
T ss_dssp CGGG-SS--S-HHHHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSEETTCCCGGGHHHHHHHHH
T ss_pred cccc-cC--C-hHHHHHHHhCChHHEEEecCCCcccccccccccccccccCcccccccccccCCCCCChHHHHHHHHHHH
Confidence 7541 11 1 1123455542 3588999997321 0 000110111111111
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCccccc
Q 012333 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 394 (466)
Q Consensus 353 ~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~i 394 (466)
... ++|.+++.+..+.|+++++++.. +|.|
T Consensus 269 ~l~-----------g~~~e~~~~~~~~Na~rlf~~~~-~~~~ 298 (301)
T 2xio_A 269 AVR-----------DEDPLELANTLYNNTIKVFFPVI-AENL 298 (301)
T ss_dssp HHH-----------TCCHHHHHHHHHHHHHHHHCCC------
T ss_pred HHH-----------CcCHHHHHHHHHHHHHHHhCchh-hhhc
Confidence 111 49999999999999999999853 5654
No 92
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=98.11 E-value=4.3e-05 Score=68.67 Aligned_cols=138 Identities=13% Similarity=0.095 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEE
Q 012333 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (466)
Q Consensus 222 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~ 301 (466)
.+.+...+++|.++++++.+|+...... ..+++........+.++ |+..-+.+.++.+.+.|+.+.
T Consensus 119 ~~~f~~~~~~a~~~~lPv~iH~~~~~~~-------------~~~il~~~p~~~~~~I~-H~~~g~~~~~~~~~~~g~y~~ 184 (268)
T 1j6o_A 119 KRVFVEQIELAGKLNLPLVVHIRDAYSE-------------AYEILRTESLPEKRGVI-HAFSSDYEWAKKFIDLGFLLG 184 (268)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHSCCCSSCEEE-TTCCSCHHHHHHHHHHTEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCchHHH-------------HHHHHHhcCCCCCCEEE-EcCCCCHHHHHHHHHCCCeEE
Confidence 4567888999999999999998653221 23334443321234555 987777788888888898888
Q ss_pred ECccchhhccCCccHHHHHHc-C-CcEEEccCCCCCCCC--------CCHHHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 012333 302 HCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNR--------MSIVDEMYLASLINKGREVFANGTTDPAALPAE 371 (466)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~ 371 (466)
+...... .....++.+++. + -++.++||+|..... ...+..... .+... .++|.+
T Consensus 185 ~sg~~~~--~~~~~l~~~i~~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~~--~la~~-----------~~~~~e 249 (268)
T 1j6o_A 185 IGGPVTY--PKNEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVE--TISQV-----------LGVPEA 249 (268)
T ss_dssp ECGGGGC--TTCHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHH--HHHHH-----------HTSCHH
T ss_pred ecccccc--cchHHHHHHHHhCChhhEEEecCCCCCCCcccCCCCCchHHHHHHHH--HHHHH-----------hCcCHH
Confidence 7744321 111235555554 3 468999999743210 011111111 11110 148999
Q ss_pred HHHHHHhHHHHHHcCCC
Q 012333 372 TVLRMATINGAKSVLWD 388 (466)
Q Consensus 372 ~al~~~T~~~A~~lgl~ 388 (466)
+.-+.++.|+++++++.
T Consensus 250 ~~~~i~~~Na~rlf~l~ 266 (268)
T 1j6o_A 250 KVDEATTENARRIFLEV 266 (268)
T ss_dssp HHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhCcc
Confidence 99999999999999873
No 93
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=98.00 E-value=0.00026 Score=64.50 Aligned_cols=139 Identities=7% Similarity=-0.029 Sum_probs=76.7
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC---------hhhH
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---------HTEI 290 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~---------~~~~ 290 (466)
...+.+...++.+.++|+++.+|+.... ..+....+....-+.++.|+.... .+.+
T Consensus 134 ~~~~~~~~~~~~a~~~glpv~iH~~~~~---------------l~~~~~~l~~~p~~~Vi~H~g~p~~~~g~~~~~~~~~ 198 (294)
T 4i6k_A 134 LNTPDWQKFLRNVESLNWQVELHAPPKY---------------LVQLLPQLNEYSFDVVIDHFGRVDPVKGIEDPDYQKF 198 (294)
T ss_dssp SSSHHHHHHHHHHHHTTCEEEEECCHHH---------------HHHHHHHHTTSSSCEEESGGGCCCTTTCTTCHHHHHH
T ss_pred cccHHHHHHHHHHHHcCCEEEEeeCcch---------------HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHH
Confidence 3557889999999999999999986411 111222222222456777876532 1233
Q ss_pred HHHHhc-CCeEEECccchhhccC------CccHHHHHHc-C-CcEEEccCCCCCCCC--CCHHHHHHHHHHHhccccccc
Q 012333 291 GLLSRA-GVKVSHCPASAMRMLG------FAPIKEMLHA-D-ICVSLGTDGAPSNNR--MSIVDEMYLASLINKGREVFA 359 (466)
Q Consensus 291 ~~~~~~-g~~~~~~p~~~~~~~~------~~~~~~~~~~-g-i~~~~gsD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 359 (466)
..+.+. ++.+.++-........ ...++.+++. | -++.+|||+|..... .+....+. .+...
T Consensus 199 ~~l~~~~nv~~k~Sg~~~~~~~~~~~~~~~~~l~~~~~~~g~dRll~gSD~P~~~~~~~~~y~~~~~---~l~~~----- 270 (294)
T 4i6k_A 199 LSLLNVKQHWIKVSGFYRLGATPSNINIAQQAYNIFKEKGFLHKLIWGSDWPHTQHESLITYEDAIK---AFKQI----- 270 (294)
T ss_dssp HHHCCTTTEEEECCCGGGSSSTTHHHHHHHHHHHHHHHHTCGGGEECCCCBTCTTCTTTCCHHHHHH---HHHHH-----
T ss_pred HHHHhCCCEEEEecccccccccCCCchhhHHHHHHHHHHhCcccEEEeCCCCCCCCcCCCCHHHHHH---HHHHH-----
Confidence 334333 5656544221111000 1234454443 4 368999999854322 12212111 11111
Q ss_pred CCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 360 NGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 360 ~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
.++.++.-+.++.|+++++|++
T Consensus 271 -------~~~~~~~~~i~~~NA~rl~~l~ 292 (294)
T 4i6k_A 271 -------VFDKHEQCLILNQNPTELFGFS 292 (294)
T ss_dssp -------CCCHHHHHHHHTHHHHHHHTC-
T ss_pred -------CCCHHHHHHHHHHCHHHHhCCC
Confidence 2788899999999999999984
No 94
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=97.91 E-value=0.00027 Score=64.13 Aligned_cols=141 Identities=11% Similarity=-0.034 Sum_probs=78.2
Q ss_pred cCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC---------hhh
Q 012333 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---------HTE 289 (466)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~---------~~~ 289 (466)
....+.+..+++.|.++|+++.+|+...... ....++..+. .+.++.|+.... .+.
T Consensus 120 ~~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~------------~~~~~~~~~p---l~~vi~H~g~~~~~~~~~~~~~~~ 184 (288)
T 2ffi_A 120 DLTGAQWRPLLERIGEQGWHVELHRQVADIP------------VLVRALQPYG---LDIVIDHFGRPDARRGLGQPGFAE 184 (288)
T ss_dssp CTTSTTTHHHHHHHHHHTCEEEECSCTTTHH------------HHHHHHTTTT---CCEEESGGGSCCTTSCTTCTTHHH
T ss_pred CcccHHHHHHHHHHHHCCCeEEEeechhhHH------------HHHHHHHHCC---CCEEEECCCCCCCCCCCCChhHHH
Confidence 3445678889999999999999998653100 0223333333 357778987654 233
Q ss_pred HHHHHhc-CCeEEECccchhhcc-------CCccHHHHHHc-C-CcEEEccCCCCCCCC--CCHHHHHHHHHHHhccccc
Q 012333 290 IGLLSRA-GVKVSHCPASAMRML-------GFAPIKEMLHA-D-ICVSLGTDGAPSNNR--MSIVDEMYLASLINKGREV 357 (466)
Q Consensus 290 ~~~~~~~-g~~~~~~p~~~~~~~-------~~~~~~~~~~~-g-i~~~~gsD~~~~~~~--~~~~~~~~~~~~~~~~~~~ 357 (466)
+..+.+. ++.+.++........ ....++.+++. | -++.+|||+|..... ......+.. +...
T Consensus 185 ~~~l~~~~n~y~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~g~drll~gSD~P~~~~~~~~~~~~~~~~---~~~~--- 258 (288)
T 2ffi_A 185 LLTLSGRGKVWVKVSGIYRLQGSPEENLAFARQALCALEAHYGAERLMWGSDWPHTQHESEVSFGSAVEQ---FEAL--- 258 (288)
T ss_dssp HTTCCCCSCEEEEEECGGGSSSCHHHHHHHHHHHHHHHHHHTCGGGEEEECCTTCTTCTTTCCHHHHHHH---HHHH---
T ss_pred HHHHHhCCCEEEEeCcchhhccccCCCHHHHHHHHHHHHHHhCCCceEEecCCCCCCCCCCCCHHHHHHH---HHHH---
Confidence 3333333 444444322111000 00235555554 5 368999999754211 122111111 1111
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 012333 358 FANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (466)
Q Consensus 358 ~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (466)
+++.++.-+.+..|++++++++.
T Consensus 259 ---------~~~~~~~~~i~~~NA~rl~~l~~ 281 (288)
T 2ffi_A 259 ---------GCSAQLRQALLLDTARALFGFEL 281 (288)
T ss_dssp ---------CCCHHHHHHHHTHHHHHHTTCCC
T ss_pred ---------CCCHHHHHHHHHHCHHHHhCccc
Confidence 25888888899999999999853
No 95
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.89 E-value=0.00011 Score=65.18 Aligned_cols=137 Identities=11% Similarity=0.113 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEE
Q 012333 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (466)
Q Consensus 222 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~ 301 (466)
.+.+++.+++|+++++++.+|+........ . ....+++...+.-..+.++.|+ +.+.++.+.+.|..+.
T Consensus 109 ~~~f~~ql~lA~e~~lPv~iH~r~~~~~~a-~-------~~~~~il~~~~~~~~~~vi~H~---~~~~a~~~l~~G~yis 177 (261)
T 3guw_A 109 IEVLKSQLELAKRMDVPCIIHTPRGNKLKA-T-------RKTLEILESLDFPADLAVIDHV---NFETLDMVLETEYWIG 177 (261)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCSSSTTHH-H-------HHHHHHHHHTTCCTTSEEEESC---CTTTHHHHHTSSSEEE
T ss_pred HHHHHHHHHHHHHhCCeEEEEcCCCcccch-H-------HHHHHHHHHcCCCCCCEEEEeC---CHHHHHHHHhCCEEEE
Confidence 345788999999999999999965310000 0 0133444444333334567788 7788999999999887
Q ss_pred EC--ccchhhccCCccHHHHHHc-C-CcEEEccCCCCCCCCCCHHHHHHHHHHHhcc-cccccCCCCCCCCCCHHHHHHH
Q 012333 302 HC--PASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASLINKG-REVFANGTTDPAALPAETVLRM 376 (466)
Q Consensus 302 ~~--p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ls~~~al~~ 376 (466)
+. |....... .+++++. + -.+.+.||+|-.. -++.. +... ..... -.+++. +.+.
T Consensus 178 ~~~~pg~~t~~~----~~~~v~~ipldrlLlETD~P~~p-----n~P~~----v~~~~~~la~-----~~g~~~--v~~~ 237 (261)
T 3guw_A 178 LTVQPGKLSAED----AARIVAEHGPERFMLNSDAGYRD-----VEITT----VAEAAVKIEE-----AVGREE--MEKV 237 (261)
T ss_dssp EECC-------C----CTTGGGGCC-CCEEEECCCCCC---------------CCCCTTHHHH-----HCTTGG--GGHH
T ss_pred ecCCCCcccHHH----HHHHHHhCCcceEEEecCCCCCC-----CCHHH----HHHHHHHHHh-----hCChhH--HHHH
Confidence 65 22111111 1222222 2 3578899996411 00000 0000 00000 013554 6677
Q ss_pred HhHHHHHHcCCCC
Q 012333 377 ATINGAKSVLWDN 389 (466)
Q Consensus 377 ~T~~~A~~lgl~~ 389 (466)
.+.|+.+++++..
T Consensus 238 ~~~Na~rlf~~~~ 250 (261)
T 3guw_A 238 ARENARKFLRVLE 250 (261)
T ss_dssp HHSSHHHHTTC--
T ss_pred HHHHHHHHHCCCc
Confidence 8888899999853
No 96
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=97.36 E-value=0.018 Score=51.51 Aligned_cols=134 Identities=10% Similarity=0.020 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHHHHc-CCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCCh-hhHHHHHh-cC
Q 012333 221 TDRLLLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSR-AG 297 (466)
Q Consensus 221 ~~~~l~~~~~~a~~~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~-~g 297 (466)
..+.+...++.|.++ |+++.+|+........ .. ....++..+. ..+.++.|+..... +.++.+.+ .+
T Consensus 128 ~~~~~~~~~~~a~~~~~lpv~iH~~~~~~~~~-~~-------~~~~~l~~~p--~l~iv~~H~G~~~~~~~~~~~~~~~~ 197 (272)
T 3cjp_A 128 QIKSLKPIFKYSMDSGSLPIWIHAFNPLVLQD-IK-------EIAELCKAFP--KVPVILGHMGGSNWMTAVELAKEIQN 197 (272)
T ss_dssp CGGGGHHHHHHHHHTTCCCEEECCSTTCCHHH-HH-------HHHHHHHHST--TSCEEEGGGGGGGHHHHHHHHHHCTT
T ss_pred ccHHHHHHHHHHHhccCCcEEEeCCCCCcccc-HH-------HHHHHHHHCC--CceEEEECCCCccHHHHHHHHHhCCC
Confidence 456788999999999 9999999864211000 00 0223344432 23456667654322 23333433 46
Q ss_pred CeEEECccchhhccCCccHHHHHHc-CCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 012333 298 VKVSHCPASAMRMLGFAPIKEMLHA-DICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (466)
Q Consensus 298 ~~~~~~p~~~~~~~~~~~~~~~~~~-gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 376 (466)
+.+.++..... ..++.+++. +-++.+|||+|.. .+...... +.. .++|.++.-+.
T Consensus 198 ~y~~~s~~~~~-----~~~~~~~~~~~dril~gSD~P~~----~~~~~~~~---~~~------------~~l~~~~~~~i 253 (272)
T 3cjp_A 198 LYLDTSAYFST-----FVLKIVINELPLKCIFGTDMPFG----DLQLSIEA---IKK------------MSNDSYVANAV 253 (272)
T ss_dssp EEEECTTCSCH-----HHHHHHHHHSTTTEECCCCTTSS----CHHHHHHH---HHH------------HCSSHHHHHHH
T ss_pred EEEEecccccH-----HHHHHHHHhCCCeEEEeCCCCCC----ChHHHHHH---HHh------------cCCCHHHHHHH
Confidence 66665433221 123444432 5689999999643 22221111 111 13899999999
Q ss_pred HhHHHHHHcCCC
Q 012333 377 ATINGAKSVLWD 388 (466)
Q Consensus 377 ~T~~~A~~lgl~ 388 (466)
+..|++++++++
T Consensus 254 ~~~Na~rl~~l~ 265 (272)
T 3cjp_A 254 LGDNISRLLNIE 265 (272)
T ss_dssp HTHHHHHHHTC-
T ss_pred HHHHHHHHhCcc
Confidence 999999999984
No 97
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=97.11 E-value=0.0069 Score=55.14 Aligned_cols=144 Identities=11% Similarity=-0.007 Sum_probs=78.1
Q ss_pred ccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCC----------h
Q 012333 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----------H 287 (466)
Q Consensus 218 ~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----------~ 287 (466)
.....+.+..+++.+.+ |+.+.+|+.... ..++...+..+.-+.++.|..... .
T Consensus 133 ~~~~~~~~~~~~~~l~~-gl~v~l~~~~~~---------------l~~l~~~~~~~~~~iVidH~G~p~~~~g~~~~~~~ 196 (303)
T 4d9a_A 133 DDAPKDKFLEVAGRLPA-GWHVVIYFEADI---------------LEELRPFMDAIPVPIVIDHMGRPDVRQGPDGADMK 196 (303)
T ss_dssp SCCCHHHHHHHHTSCCT-TCEEEEECCGGG---------------HHHHHHHHHHCSSCEEEGGGGCCCGGGCTTSHHHH
T ss_pred cccCHHHHHHHHHHHhc-CCEEEEeccccc---------------HHHHHHHHHHCCCcEEEeCCCCCCcccCCCCHHHH
Confidence 45677888999999999 999999986421 111222222224568888877532 1
Q ss_pred hhHHHHHh-cCCeEEECccchhhccC-----C-ccHHHHHHcC-CcEEEccCCCCCCCCC--CHHHHHHHHHHHhccccc
Q 012333 288 TEIGLLSR-AGVKVSHCPASAMRMLG-----F-APIKEMLHAD-ICVSLGTDGAPSNNRM--SIVDEMYLASLINKGREV 357 (466)
Q Consensus 288 ~~~~~~~~-~g~~~~~~p~~~~~~~~-----~-~~~~~~~~~g-i~~~~gsD~~~~~~~~--~~~~~~~~~~~~~~~~~~ 357 (466)
+.++.+++ .++.+.++-........ . +-++.+++.+ -++.+|||+|...... .-+..+.... ..
T Consensus 197 ~~~~l~~~~~NV~vKlSg~~~~~~~~~~~~~~~~~~~~~~~~~~dRlmfGSDwP~~~~~~~~~~~~~~~~~~--~~---- 270 (303)
T 4d9a_A 197 AFRRLLDSREDIWFKATCPDRLDPAGPPWDDFARSVAPLVADYADRVIWGTAWPHPNMQDAIPDDGLVVDMI--PR---- 270 (303)
T ss_dssp HHHHHHHHCTTEEEECCCHHHHCTTCTTCHHHHHHHHHHHHHTTTSEECCCCTTCTTCTTSCCCHHHHHHTH--HH----
T ss_pred HHHHHHhhCCCEEEEeeCceecCCCCCCHHHHHHHHHHHHHhCcccEEEecCCCCcccccCCCCHHHHHHHH--HH----
Confidence 23455555 35655544221111011 0 1134455554 4689999998654221 1111111111 11
Q ss_pred ccCCCCCCCCC-CHHHHHHHHhHHHHHHcCCCCccc
Q 012333 358 FANGTTDPAAL-PAETVLRMATINGAKSVLWDNDIG 392 (466)
Q Consensus 358 ~~~~~~~~~~l-s~~~al~~~T~~~A~~lgl~~~~G 392 (466)
.+ +.++.=+.+-.|+++++++...-|
T Consensus 271 ---------~~~~~~~~~~il~~NA~rly~~~~~~~ 297 (303)
T 4d9a_A 271 ---------IAPTPELQHKMLVTNPMRLYWSEEMEG 297 (303)
T ss_dssp ---------HSCSHHHHHHHHTHHHHHHHCGGGC--
T ss_pred ---------HCCCHHHHHHHHHHHHHHHhCCCcccc
Confidence 03 466666778899999999865433
No 98
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=97.04 E-value=0.012 Score=54.10 Aligned_cols=28 Identities=4% Similarity=-0.145 Sum_probs=23.2
Q ss_pred cCCHHHHHHHHHHHHHcCCccceeccCC
Q 012333 219 NATDRLLLETRDMAREFKTGIHMHVAEI 246 (466)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 246 (466)
....+.+..+++.|.++|+++.+|....
T Consensus 141 ~~~~~~~~~~~~~a~~~~lpv~iH~~~~ 168 (327)
T 2dvt_A 141 YYDLPQYRPFWGEVEKLDVPFYLHPRNP 168 (327)
T ss_dssp CTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred CCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 4455678999999999999999998643
No 99
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=96.94 E-value=0.036 Score=50.08 Aligned_cols=221 Identities=13% Similarity=0.072 Sum_probs=108.2
Q ss_pred HHHHHHhcCceeeeecCc-------cCHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhcc
Q 012333 130 CGIELIHSGVTCFAEAGG-------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHH 202 (466)
Q Consensus 130 ~~~~~~~~GvTtv~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (466)
.+..+-..||...+..+. ..-..+.+.++...-+...... +++. ......++..+ + .+
T Consensus 52 ~l~~md~~GV~~~V~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~-------v~p~----~~~~a~~eL~~-~---~~ 116 (291)
T 3irs_A 52 MFEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPVGS-------IEAA----TRKEAMAQMQE-I---LD 116 (291)
T ss_dssp HHHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEEEEE-------CCCS----SHHHHHHHHHH-H---HH
T ss_pred HHHHHHHCCCCEEEEcCCCccccccccHHHHHHHHHHCCCcEEEEEe-------cCcc----CHHHHHHHHHH-H---Hh
Confidence 345567889987665442 2234445555554333322111 1111 11233333333 2 23
Q ss_pred CCCCCeEEEEeec-ccccCCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEE
Q 012333 203 AADGRIRIWFGIR-QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH 281 (466)
Q Consensus 203 ~~~~~i~~~~~~~-~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 281 (466)
.+--.++...... .......+.+..+++.|.++|+++.+|+........ . .+.......++..+ -..+.++.|
T Consensus 117 ~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~~~~~~~---~-~~~p~~~~~v~~~~--P~l~ivl~H 190 (291)
T 3irs_A 117 LGIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGGNAGPDI---T-YTNPEHIDRVLGDF--PDLTVVSSH 190 (291)
T ss_dssp TTCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSSSCSSSG---G-GGCHHHHHHHHHHC--TTCCEEEEG
T ss_pred CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCCCCCCCC---c-cCCHHHHHHHHHHC--CCCEEEeec
Confidence 3334444332211 122345567889999999999999999976411000 0 00000012233332 234577889
Q ss_pred eecCChhh-HHHHHh-cCCeEEECccchhh-ccCCccHHHHHHc-C-CcEEEccCCCCCCCCCCHHHHHHHHHHHhcccc
Q 012333 282 TVWVNHTE-IGLLSR-AGVKVSHCPASAMR-MLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE 356 (466)
Q Consensus 282 ~~~~~~~~-~~~~~~-~g~~~~~~p~~~~~-~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (466)
+.....++ ++.+.+ .++.+.+. .... ......+.++++. | -++.+|||+|.. .+...+. .+..
T Consensus 191 ~G~~~~~~~~~l~~~~~nvy~~~S--g~~~~~~~~~~~~~~~~~~g~drllfgSD~P~~----~~~~~~~---~~~~--- 258 (291)
T 3irs_A 191 GNWPWVQEIIHVAFRRPNLYLSPD--MYLYNLPGHADFIQAANSFLADRMLFGTAYPMC----PLKEYTE---WFLT--- 258 (291)
T ss_dssp GGTTCHHHHHHHHHHCTTEEEECG--GGGSSSTTHHHHHHHHTTGGGGTBCCCCCBTSS----CHHHHHH---HHHT---
T ss_pred CCcccHHHHHHHHhHCCCeEecHH--HHhccCCCHHHHHHHHHHhCcceEEEecCCCCC----CHHHHHH---HHHH---
Confidence 86533233 333322 25444432 2211 0111233444432 3 257899999653 2222211 1111
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCccc
Q 012333 357 VFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (466)
Q Consensus 357 ~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G 392 (466)
.++|.++.-+.++.|+++++++..+-|
T Consensus 259 ---------l~l~~e~~~~i~~~NA~rl~~~~~~~~ 285 (291)
T 3irs_A 259 ---------LPIKPDAMEKILHGNAERLLAQAGREG 285 (291)
T ss_dssp ---------SSCCHHHHHHHHTHHHHHHHHHSCC--
T ss_pred ---------CCCCHHHHHHHHHHHHHHHhCcccccc
Confidence 148999999999999999999876555
No 100
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=96.83 E-value=0.0068 Score=56.69 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHc----CCccceeccCCcchhHHHHhhcCCCCchHHHHhhhcc-------------------------CC
Q 012333 224 LLLETRDMAREF----KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEF-------------------------LQ 274 (466)
Q Consensus 224 ~l~~~~~~a~~~----~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~ 274 (466)
.+++.+++|.++ ++++.+|+-...... .+++..... ..
T Consensus 180 ~F~~QL~LA~e~~~~~~lPv~IH~R~A~~d~-------------l~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (401)
T 3e2v_A 180 FFEEQLKISCLNDKLSSYPLFLHMRSACDDF-------------VQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHP 246 (401)
T ss_dssp HHHHHHHHTTSSHHHHTSCEEEEEESCHHHH-------------HHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCT
T ss_pred HHHHHHHHHHhhhccCCCeEEEEecchHHHH-------------HHHHHHhhccccccccccccccccccccccccccCC
Confidence 467788999999 999999997654332 222222110 01
Q ss_pred CCeeEEEeecCChhhHHHHHhcC--CeEEECccchhhccCCccHHHHHHc-C-CcEEEccCCC
Q 012333 275 NNLLSAHTVWVNHTEIGLLSRAG--VKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGA 333 (466)
Q Consensus 275 ~~~~~~H~~~~~~~~~~~~~~~g--~~~~~~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~ 333 (466)
....+.|+..-+.++++.+.+.| ..+.+.... ++. .. ..++++. . -.+.+=||.|
T Consensus 247 ~~~~V~H~FsGs~e~a~~~l~lG~~~yis~~g~~-~k~--~~-~~e~v~~iPldrLLlETDaP 305 (401)
T 3e2v_A 247 DRKLVVHSFTGSAIDLQKLLNLSPNIFIGVNGCS-LRT--EE-NLAVVKQIPTERLLLETDAP 305 (401)
T ss_dssp TCCEEECSCCCCHHHHHHHHHHCTTEEEEECGGG-GSS--HH-HHHHHHTSCGGGEEECCCTT
T ss_pred CCcEEEEcCCCCHHHHHHHHhCCCCEEEEeCCEe-cCC--HH-HHHHHHhCCchhEEEecCCC
Confidence 13468899999999999999999 888887652 211 11 1123222 1 1367788886
No 101
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=96.63 E-value=0.029 Score=51.04 Aligned_cols=145 Identities=10% Similarity=-0.001 Sum_probs=74.5
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchhHH--------HHhhc-CCCCch-----HHHHhhhccCCCCeeEEEeecC
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQV--------VMDTR-KVDHGT-----VTFLDKIEFLQNNLLSAHTVWV 285 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~--------~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~H~~~~ 285 (466)
...+.+...++.|.++++++.+|.......... ..... ...... ..++..+. ..+.++.|+...
T Consensus 132 ~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~P--~l~~v~~H~gg~ 209 (307)
T 2f6k_A 132 FGSPVLERVYQELDARQAIVALHPNEPAILPKNVDIDLPVPLLGFFMDTTMTFINMLKYHFFEKYP--NIKVIIPHAGAF 209 (307)
T ss_dssp TTCGGGHHHHHHHHTTTCEEEEECCCCSCCCTTSSTTCCHHHHHHHHHHHHHHHHHHHTTHHHHCT--TCEEEESGGGTT
T ss_pred CCcHhHHHHHHHHHHcCCeEEECCCCCccccccccccccchhccchHHHHHHHHHHHhcCccccCC--CCeEEccCCCcc
Confidence 345678899999999999999999754321000 00000 000000 01222221 235677887531
Q ss_pred Ch---------------hhHHHHHhcCCeEEECccchhhccCCccHHHHHHc-C-CcEEEccCCCCCCCCCCHHHHHHHH
Q 012333 286 NH---------------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLA 348 (466)
Q Consensus 286 ~~---------------~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~~~~~~~~~~~~ 348 (466)
-+ +.+....+ ++.+.++.... ...++.+++. | -++.+|||+|... ........
T Consensus 210 ~p~~~~~~~~~~~~~~~~~~~~~~~-n~y~~~s~~~~-----~~~l~~~~~~~g~drll~gSD~P~~~----~~~~~~~~ 279 (307)
T 2f6k_A 210 LGIVDDRIAQYAQKVYQVDVYDVMH-HVYFDVAGAVL-----PRQLPTLMSLAQPEHLLYGSDIPYTP----LDGSRQLG 279 (307)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHH-HSEEECCSSCT-----TTHHHHHTTTSCGGGEECCCCTTTSC----HHHHHHHH
T ss_pred chhhHHHHHhhccccCcccHHHHHh-heEEeccCCCC-----HHHHHHHHHhcCcccEEEecCCCCCC----chhHHHHH
Confidence 11 12222233 66666543321 1235555554 3 3689999997532 21111111
Q ss_pred HHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 012333 349 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (466)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (466)
..+... .++|.++.-+.+..|+++++++
T Consensus 280 ~~l~~~-----------~~l~~~~~~~i~~~Na~rl~~~ 307 (307)
T 2f6k_A 280 HALATT-----------DLLTNEQKQAIFYDNAHRLLTE 307 (307)
T ss_dssp HHHHHC-----------TTSCHHHHHHHHTHHHHHHHHC
T ss_pred HHHhhc-----------cCCCHHHHHHHHHHHHHHHhCc
Confidence 111110 1389999888999999998864
No 102
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=96.19 E-value=0.091 Score=47.69 Aligned_cols=139 Identities=12% Similarity=-0.094 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccC-CCCeeEEEeecCCh-------------
Q 012333 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFL-QNNLLSAHTVWVNH------------- 287 (466)
Q Consensus 222 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~~~~------------- 287 (466)
.+.+...++.+.++|+++.+|+.... ..+....+... +-+.++.|......
T Consensus 121 ~~~~~~~~~~~~~~glpv~ih~~~~~---------------l~~l~~ll~~~P~l~iVi~H~G~p~~~~~~~~~~~~~~w 185 (303)
T 4do7_A 121 DADFARGVAWLQANDYVYDVLVFERQ---------------LPDVQAFCARHDAHWLVLDHAGKPALAEFDRDDTALARW 185 (303)
T ss_dssp CHHHHHHHHHHHHTTCEEEECCCGGG---------------HHHHHHHHHHCCSSCEEEGGGGCCCGGGCC---CHHHHH
T ss_pred CHHHHHHHHHHHHCCCeEEEecCHHH---------------HHHHHHHHHHCCCCCEEEeCCCCCCccccccccchHHHH
Confidence 34678889999999999999986421 11222222222 34678888766421
Q ss_pred -hhHHHHHhc-CCeEEECccchhhc----------cC-CccHHHHHHc-C-CcEEEccCCCCCCCCCCHHHHHHHHHH-H
Q 012333 288 -TEIGLLSRA-GVKVSHCPASAMRM----------LG-FAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASL-I 351 (466)
Q Consensus 288 -~~~~~~~~~-g~~~~~~p~~~~~~----------~~-~~~~~~~~~~-g-i~~~~gsD~~~~~~~~~~~~~~~~~~~-~ 351 (466)
+.+..+++. ++.+.++-...... .. .+-++.+++. | -++.+|||+|........-........ .
T Consensus 186 ~~~l~~la~~~nv~~klSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD~P~~~~~~~~~~~~~~~~~~~ 265 (303)
T 4do7_A 186 RAALRELAALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVCLLAASYDEVASLVERWA 265 (303)
T ss_dssp HHHHHHHHTSTTEEEEECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECCCBTGGGGTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEeCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeCCCCCCcCcCCHHHHHHHHHHHH
Confidence 234455544 45555542211100 00 0113344443 3 479999999754222122111111100 0
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 012333 352 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (466)
Q Consensus 352 ~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (466)
.. +++.++.=+.+..|+++++|++
T Consensus 266 ~~-------------~l~~~~~~~i~~~Na~rl~~l~ 289 (303)
T 4do7_A 266 ES-------------RLSAAERSALWGGTAARCYALP 289 (303)
T ss_dssp HH-------------HCCHHHHHHHTTHHHHHHTTCC
T ss_pred hc-------------CCCHHHHHHHHHHHHHHHhCCC
Confidence 00 2788888888999999999984
No 103
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=94.97 E-value=0.42 Score=43.89 Aligned_cols=28 Identities=14% Similarity=0.050 Sum_probs=23.9
Q ss_pred cCCHHHHHHHHHHHHHcCCccceeccCC
Q 012333 219 NATDRLLLETRDMAREFKTGIHMHVAEI 246 (466)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 246 (466)
..+++.+..+.+.+.++++++.+|....
T Consensus 154 ~l~d~~~~p~~~~~~e~~lpv~iH~~~~ 181 (334)
T 2hbv_A 154 DLDDATLEAFLTHCANEDIPILVHPWDM 181 (334)
T ss_dssp CTTSHHHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCCcHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4566789999999999999999999753
No 104
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=93.81 E-value=2 Score=39.26 Aligned_cols=28 Identities=14% Similarity=0.252 Sum_probs=23.2
Q ss_pred cCCHHHHHHHHHHHHHcCCccceeccCC
Q 012333 219 NATDRLLLETRDMAREFKTGIHMHVAEI 246 (466)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 246 (466)
...++.+..+.+.+.++++++.+|....
T Consensus 151 ~l~d~~~~~~~~~~~e~~lpv~iH~~~~ 178 (336)
T 2wm1_A 151 DLNAQELFPVYAAAERLKCSLFVHPWDM 178 (336)
T ss_dssp ETTCGGGHHHHHHHHHHTCEEEEECCSC
T ss_pred CCCCccHHHHHHHHHHcCCEEEECCCCC
Confidence 3455678899999999999999999753
No 105
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=93.26 E-value=2.4 Score=37.15 Aligned_cols=83 Identities=12% Similarity=0.086 Sum_probs=47.1
Q ss_pred hhhHHHHHhcCCeEEECccchhhcc---CCccHHHHHHcCCcEEEccCCCCCCC-CCCHHHHHHHHHHHhcccccccCCC
Q 012333 287 HTEIGLLSRAGVKVSHCPASAMRML---GFAPIKEMLHADICVSLGTDGAPSNN-RMSIVDEMYLASLINKGREVFANGT 362 (466)
Q Consensus 287 ~~~~~~~~~~g~~~~~~p~~~~~~~---~~~~~~~~~~~gi~~~~gsD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (466)
++.++.+++.|+.+.++-.+..... .....+.+++.|+.+++|||.-.... ...+-+.+.... .+
T Consensus 147 ~~~l~~l~~~G~~iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igSDaH~~~~r~~~~~~a~~~l~--~~--------- 215 (262)
T 3qy7_A 147 PSLLYHLVEKGAASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASDAHNVKTRNFHTQEALYVLE--KE--------- 215 (262)
T ss_dssp THHHHHHHHTTCEEEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEECCBCSSSSSCCCHHHHHHHHH--HH---------
T ss_pred HHHHHHHHHCCCEEEEECCccCcccchHHHHHHHHHHhCCCeEEEEccCCCCCCCCchHHHHHHHHH--HH---------
Confidence 3567888889987665533321111 11235677889999999999653322 333434433321 11
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 363 TDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 363 ~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
+....+-+ ...||..++.
T Consensus 216 -----~G~~~a~~-~~~n~~~il~ 233 (262)
T 3qy7_A 216 -----FGSELPYM-LTENAELLLR 233 (262)
T ss_dssp -----HCSHHHHH-HHHHHHHHHT
T ss_pred -----hCHHHHHH-HHHHHHHHHC
Confidence 12333444 5689998886
No 106
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=92.17 E-value=5.3 Score=34.55 Aligned_cols=49 Identities=12% Similarity=0.147 Sum_probs=31.1
Q ss_pred hhhHHHHHhcCCeEEECccch--hhccC------CccHHHHHHcCCcEEEccCCCCC
Q 012333 287 HTEIGLLSRAGVKVSHCPASA--MRMLG------FAPIKEMLHADICVSLGTDGAPS 335 (466)
Q Consensus 287 ~~~~~~~~~~g~~~~~~p~~~--~~~~~------~~~~~~~~~~gi~~~~gsD~~~~ 335 (466)
++.++.+++.|+.+.++-.+. ....+ ..-++.+.+.|+.+++|||.-..
T Consensus 151 ~~~l~~l~~~G~~lEiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~~GSDaH~~ 207 (247)
T 2wje_A 151 EKRVRELIDMGCYTQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIASDMHNL 207 (247)
T ss_dssp HHHHHHHHHTTCEEEEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSEEECCBCCS
T ss_pred HHHHHHHHHCCCEEEEecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 467888889998876653332 11111 11234456899999999997543
No 107
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=91.92 E-value=7.6 Score=35.77 Aligned_cols=45 Identities=11% Similarity=-0.135 Sum_probs=30.3
Q ss_pred cCCCCCeEEEEeecccccCCHHHHHHHHHHHHHcCCccceeccCCc
Q 012333 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (466)
Q Consensus 202 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 247 (466)
+.+-..+++..... ....+++.+..+.+.+.++|++|.+|.....
T Consensus 153 ~~G~~Gv~l~~~~~-~~~~~d~~~~p~~~~~~e~g~pV~iH~g~~~ 197 (357)
T 3nur_A 153 DLGFKGALIMGRAQ-DGFLDQDKYDIIFKTAENLDVPIYLHPAPVN 197 (357)
T ss_dssp TTCCCCEEEESCBT-TBCTTSGGGHHHHHHHHHHTCCEEEECCCCC
T ss_pred hcCceEEEeCCCCC-CCCCCCccHHHHHHHHHhcCCeEEEecCCCC
Confidence 44445555532222 2334556788999999999999999997643
No 108
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=89.35 E-value=3.4 Score=37.97 Aligned_cols=147 Identities=12% Similarity=0.032 Sum_probs=73.4
Q ss_pred CCHHHHHHHHHHHHHcCCccceeccCCcchh------HHHHh-hcCCCCc-hHHHHhhhccCCCCeeEEEeecCChhhHH
Q 012333 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYEN------QVVMD-TRKVDHG-TVTFLDKIEFLQNNLLSAHTVWVNHTEIG 291 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~------~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~H~~~~~~~~~~ 291 (466)
...+.+..+++.|.++++++.+|........ .+... ......- ...++..+ -.-+.++.|+...-+..+.
T Consensus 156 l~d~~~~p~~~~a~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~a~~~li~~~v~~~~--P~l~~vi~H~Gg~~p~~~~ 233 (350)
T 2gwg_A 156 LTDRIWYPIYEKMVELEIPAMIHVSTSCNTCFHTTGAHYLNADTTAFMQCVAGDLFKDF--PELKFVIPHGGGAVPYHWG 233 (350)
T ss_dssp TTSGGGHHHHHHHHHHTCCEEECCCC---------TTHHHHHHHHHHHHHHHSCHHHHC--TTCCEEESGGGTTTGGGHH
T ss_pred CCCHHHHHHHHHHHHcCCeEEECCCCCCcccccccccccchHHHHHHHHHHhcCccccC--CCCcEEeccCCCcchhhHH
Confidence 4566788999999999999999987542210 00000 0000000 00122222 2335788998632222211
Q ss_pred ---H------------HHhcCCeEEECccchhhccCCccHHHHHHc-C-CcEEEccCCCCCCCCC-----CHHHHHHHHH
Q 012333 292 ---L------------LSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRM-----SIVDEMYLAS 349 (466)
Q Consensus 292 ---~------------~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~~~-----~~~~~~~~~~ 349 (466)
. ....++.+.++.... ..++.+++. | -++.+|||+|...... ..+.....
T Consensus 234 r~~~~~~~~~~~~l~~~~~~n~y~d~s~~~~------~~l~~l~~~~g~dril~gSD~P~~~~~~~p~~~~~~~~~~~-- 305 (350)
T 2gwg_A 234 RFRGLAQEMKKPLLEDHVLNNIFFDTCVYHQ------PGIDLLNTVIPVDNVLFASEMIGAVRGIDPRTGFYYDDTKR-- 305 (350)
T ss_dssp HHHHHHHHTTCCCHHHHTTTTEEEECCCCSH------HHHHHHHHHSCGGGEECCCCCSSSCCCEETTTTEETTCTHH--
T ss_pred HHHHHHHhccCCCcHHHHhhcEEEEecccCc------HHHHHHHHHhCcccEEEecCCCCCcccCCcccccchhhHHH--
Confidence 1 122345555443221 234555544 4 3689999997432100 00011000
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 012333 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (466)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (466)
.+... .+++.++.-+.+..|+++++++
T Consensus 306 ~l~~~-----------~~l~~~~~~~i~~~NA~rl~~~ 332 (350)
T 2gwg_A 306 YIEAS-----------TILTPEEKQQIYEGNARRVYPR 332 (350)
T ss_dssp HHHHC-----------SSSCHHHHHHHHTHHHHHHCHH
T ss_pred HHHhc-----------cCCCHHHHHHHHHHHHHHHHHh
Confidence 01100 1388999999999999999975
No 109
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=87.78 E-value=0.89 Score=38.54 Aligned_cols=87 Identities=9% Similarity=-0.010 Sum_probs=57.3
Q ss_pred ChhhHHHHHhcCCeEEECccchhhcc------CCc----cHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhccc
Q 012333 286 NHTEIGLLSRAGVKVSHCPASAMRML------GFA----PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 355 (466)
Q Consensus 286 ~~~~~~~~~~~g~~~~~~p~~~~~~~------~~~----~~~~~~~~gi~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~ 355 (466)
+.+.++.+++.|+.+.++-.+..+.. ... -++...+.|+++.++||......-.++.+....+...
T Consensus 113 ~~~~a~~A~e~gv~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~ivisSDAh~~~~v~~~~~~~~l~~~~---- 188 (212)
T 1v77_A 113 DHVLAKLMVKKNVALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRRFLTSSAQEKWDVRYPRDLISLGVVI---- 188 (212)
T ss_dssp CHHHHHHHHHHTCEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSSGGGCCCHHHHHHHHHHT----
T ss_pred CHHHHHHHHHCCeEEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCCEEEeCCCCChhhcCCHHHHHHHHHHc----
Confidence 45778889999999988765543210 011 2233456699999999986443223344444433221
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 012333 356 EVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (466)
Q Consensus 356 ~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (466)
|++.++++.+.|.+|.+++..
T Consensus 189 -----------G~~~e~~~~~l~~~~~~i~~~ 209 (212)
T 1v77_A 189 -----------GMEIPQAKASISMYPEIILKR 209 (212)
T ss_dssp -----------TCCHHHHHHTTTHHHHHHHC-
T ss_pred -----------CCCHHHHHHHHHHHHHHHHHh
Confidence 599999999999999998863
No 110
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=81.20 E-value=21 Score=32.89 Aligned_cols=131 Identities=12% Similarity=0.040 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEE---------eecCChhhHHHH
Q 012333 224 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH---------TVWVNHTEIGLL 293 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H---------~~~~~~~~~~~~ 293 (466)
.=+++++...+.|+.+.+ |+.+. ...+.++......+.+| ...+++++++.+
T Consensus 179 ~G~~vV~emnrlGmivDlSH~s~~------------------~~~dvl~~s~~PviaSHSn~ral~~h~RNl~De~l~~l 240 (369)
T 1itu_A 179 FGQRVVKELNRLGVLIDLAHVSVA------------------TMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLV 240 (369)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCHH------------------HHHHHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHHHH
T ss_pred hHHHHHHHHHHcCCEEEcCCCCHH------------------HHHHHHHhcCCCEEEeCCChhhcCCCCCCCCHHHHHHH
Confidence 346778888899998865 65432 12222222333444444 446789999999
Q ss_pred HhcCCeEEECccchhhc-cCCccHHHHHH--------cCC-cEEEccCCCCC--CC----CCCHHHHHHHHHHHhccccc
Q 012333 294 SRAGVKVSHCPASAMRM-LGFAPIKEMLH--------ADI-CVSLGTDGAPS--NN----RMSIVDEMYLASLINKGREV 357 (466)
Q Consensus 294 ~~~g~~~~~~p~~~~~~-~~~~~~~~~~~--------~gi-~~~~gsD~~~~--~~----~~~~~~~~~~~~~~~~~~~~ 357 (466)
++.|..+-++....+-. .....+..+.+ .|+ .|++|||.-.. .+ ...-+..+.... ..
T Consensus 241 a~~GGvigv~~~~~fl~~~~~~t~~~~~~hi~hi~~~~G~dhVgiGsDfdG~~~~p~gl~d~~~~p~l~~~L-~~----- 314 (369)
T 1itu_A 241 KQTDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAEL-LR----- 314 (369)
T ss_dssp HHHTCEEEECCCHHHHTSSSCCBHHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBTCSSTTCHHHHHHHH-HH-----
T ss_pred HHcCCeEEEEechhhcCCCCCCCHHHHHHHHHHHHHhhCCCeEEECCCCCCCCCCCCCCCCHHHHHHHHHHH-HH-----
Confidence 99998877775543321 12222333222 255 49999997321 11 122233332222 21
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 358 FANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 358 ~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
.|+|.+++-+.+-.|..+.+.
T Consensus 315 --------~G~se~~i~ki~g~N~lRvl~ 335 (369)
T 1itu_A 315 --------RNWTEAEVKGALADNLLRVFE 335 (369)
T ss_dssp --------TTCCHHHHHHHHTHHHHHHHH
T ss_pred --------cCCCHHHHHHHHhHhHHHHHH
Confidence 258999999999999988886
No 111
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=80.40 E-value=32 Score=31.04 Aligned_cols=92 Identities=14% Similarity=0.057 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEee---------cCChhhHHHH
Q 012333 224 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGLL 293 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~---------~~~~~~~~~~ 293 (466)
.=+++++...+.|+.+.+ |+.+ ....+.++....+.+++|.. .+++++++.+
T Consensus 140 ~G~~vV~emnrlGmivDlSH~s~------------------~~~~dvl~~s~~Pvi~SHsn~~al~~h~RNl~De~iral 201 (325)
T 2i5g_A 140 FGREIVAEMNRVGIMCDLSHVGS------------------KTSEEVILESKKPVCYSHCLPSGLKEHPRNKSDEELKFI 201 (325)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCH------------------HHHHHHHHHCSSCCEEEEECBTTTCCCTTSBCHHHHHHH
T ss_pred HHHHHHHHHHHcCcEEEcCcCCH------------------HHHHHHHHHhCCCEEEeCCCccccCCCCCCCCHHHHHHH
Confidence 346677777888887755 5432 22333333344556677753 4678999999
Q ss_pred HhcCCeEEECccchhhc-cCCccHHHH-------HH-cCC-cEEEccCCC
Q 012333 294 SRAGVKVSHCPASAMRM-LGFAPIKEM-------LH-ADI-CVSLGTDGA 333 (466)
Q Consensus 294 ~~~g~~~~~~p~~~~~~-~~~~~~~~~-------~~-~gi-~~~~gsD~~ 333 (466)
++.|..+-++..+.+-. .....+..+ .+ .|+ .+.+|||.+
T Consensus 202 a~~GGvigv~~~~~fl~~~~~~t~~~~~~hi~~i~~~~G~dhVgiGsDf~ 251 (325)
T 2i5g_A 202 ADHGGFVGVTMFAPFLKKGIDSTIDDYAEAIEYVMNIVGEDAIGIGTDFT 251 (325)
T ss_dssp HHTTCEEEECCCGGGSSSGGGCBHHHHHHHHHHHHHHHCTTSEEECCCBC
T ss_pred HHcCCeEEEeecchhcCCCCCCCHHHHHHHHHHHHHhcCCceEEECCcCc
Confidence 99998877665443321 111122222 22 254 599999984
No 112
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=72.76 E-value=50 Score=29.15 Aligned_cols=71 Identities=14% Similarity=-0.089 Sum_probs=36.2
Q ss_pred HHHHhhhccCCCCeeEEEeecCC------hhhHHHHHhcCCe-EEECccchhhccCCccHHHHHHcCCcEEEccCCCC
Q 012333 264 VTFLDKIEFLQNNLLSAHTVWVN------HTEIGLLSRAGVK-VSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP 334 (466)
Q Consensus 264 ~~~~~~~~~~~~~~~~~H~~~~~------~~~~~~~~~~g~~-~~~~p~~~~~~~~~~~~~~~~~~gi~~~~gsD~~~ 334 (466)
.+.+..+...+.-.+++|-.... .+.++.+++.|.. +.+.-..........-.+.+.+.|+.+++|||.-.
T Consensus 174 ~~~i~~i~~~Gg~~VlAHP~r~~~~~~~~~~~l~~l~~~g~~giEv~~~~~~~~~~~~~~~~a~~~gl~~t~GSDaH~ 251 (292)
T 2yb1_A 174 EDAVGWIVGAGGMAVIAHPGRYDMGRTLIERLILDFQAAGGQGIEVASGSHSLDDMHKFALHADRHGLYASSGSDFHA 251 (292)
T ss_dssp HHHHHHHHHTTCEEEECCGGGSSCCHHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHHHHHHTCEEEEECCBCS
T ss_pred HHHHHHHHHcCCEEEEECcCccccchhhHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCceEEeeCCCC
Confidence 34444444444556777764432 2445556666543 33322111100111123345678999999999753
No 113
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=68.24 E-value=55 Score=30.14 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=23.9
Q ss_pred cCCHHHHHHHHHHHHHcCCccceeccCCc
Q 012333 219 NATDRLLLETRDMAREFKTGIHMHVAEIP 247 (466)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 247 (466)
..+...+..+.+.+.++|++|.+|.....
T Consensus 187 ~l~d~~~~pi~~~~~e~g~pV~iH~g~~~ 215 (373)
T 4inf_A 187 YLDEEFFDPIFRALVEVDQPLYIHPATSP 215 (373)
T ss_dssp CTTSGGGHHHHHHHHHHTCCEEECCCCCC
T ss_pred CCCCcchHHHHHHHHHcCCeEEECCCCCC
Confidence 44556788999999999999999997653
No 114
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=63.18 E-value=99 Score=28.93 Aligned_cols=62 Identities=10% Similarity=0.178 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEee---------cCChhhHHHH
Q 012333 224 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGLL 293 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~---------~~~~~~~~~~ 293 (466)
.=+++++...+.|+.+.+ |+.+ ....+.++......+.+|.. .+++++++.+
T Consensus 194 ~G~~vV~eMNrlGmiVDlSH~s~------------------~t~~dvl~~s~~PVIaSHSnaral~~hpRNl~De~l~~l 255 (417)
T 3b40_A 194 LGKQAVERLNDLGVIIDVSQMST------------------KALEQVAALSRAPIVASHSAPRALVDIKRNLSDHEMQLI 255 (417)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCH------------------HHHHHHHHHCSSCEEEEEECBTTTSCCTTSBCHHHHHHH
T ss_pred hHHHHHHHHHHcCCEEECCCCCH------------------HHHHHHHHhcCCCEEEeCCchhhcCCCCCCCCHHHHHHH
Confidence 346778888899998865 6543 22233333444556677753 5788999999
Q ss_pred HhcCCeEEEC
Q 012333 294 SRAGVKVSHC 303 (466)
Q Consensus 294 ~~~g~~~~~~ 303 (466)
++.|..+-++
T Consensus 256 a~~GGVIgv~ 265 (417)
T 3b40_A 256 KDSGGVIQVV 265 (417)
T ss_dssp HHTTCEEEEE
T ss_pred HHcCCEEEEE
Confidence 9998776655
No 115
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=58.73 E-value=37 Score=31.37 Aligned_cols=104 Identities=10% Similarity=0.009 Sum_probs=51.4
Q ss_pred HHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHh--cCCeEEECc
Q 012333 227 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR--AGVKVSHCP 304 (466)
Q Consensus 227 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~--~g~~~~~~p 304 (466)
.+++.+.++|+++.+|......... ...........++.......-+.++.||.. ...++..+.+ .++.+.+..
T Consensus 213 ~~~e~a~e~glpv~iH~g~~d~~~~---~~~~~p~~l~~ll~~~~~P~lkiVl~Hg~~-~~~~~~~l~~~~~nvy~d~s~ 288 (376)
T 2qpx_A 213 HVAPFIIAQDMPLQFHVGYGDADTD---MYLGNPLLMRDYLKAFTKKGLKVVLLHCYP-YHREAGYLASVFPNLYFDISL 288 (376)
T ss_dssp HHHHHHHHHTCCEEEEESCCCTTSC---GGGCCGGGGHHHHHHHGGGTCCEEEEECTT-CHHHHHHHHHHSTTEEEECTT
T ss_pred HHHHHHHHCCCeEEEEeCCCCCCCC---ccccCHHHHHHHHhcCCCCCCcEEEECCCc-cHHHHHHHHHhCCCEEEeccc
Confidence 4458899999999999975210000 000000112233441122334688999443 2334555554 456565553
Q ss_pred cchhhc-cCCccHHHHHHc-C-CcEEEccCCCC
Q 012333 305 ASAMRM-LGFAPIKEMLHA-D-ICVSLGTDGAP 334 (466)
Q Consensus 305 ~~~~~~-~~~~~~~~~~~~-g-i~~~~gsD~~~ 334 (466)
.+.... .....++.+++. | -++.+|||++.
T Consensus 289 ~~~~~~~~~~~~l~~l~~~~g~dRiLfGSD~P~ 321 (376)
T 2qpx_A 289 LDNLGPSGASRVFNEAVELAPYTRILFASDAST 321 (376)
T ss_dssp HHHHSGGGHHHHHHHHTSSSCGGGEECCCCCCB
T ss_pred ccccChhhHHHHHHHHHHhcCCCCEEEECCCCc
Confidence 111110 011234555554 3 36789999974
No 116
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=56.39 E-value=1.1e+02 Score=27.21 Aligned_cols=145 Identities=10% Similarity=0.023 Sum_probs=73.0
Q ss_pred cCCHHHHHHHHHHHHHcCCccceeccCCcchh------HHHHhhcCCCCchH-----HHHhhhccCCCCeeEEEeecCCh
Q 012333 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYEN------QVVMDTRKVDHGTV-----TFLDKIEFLQNNLLSAHTVWVNH 287 (466)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~H~~~~~~ 287 (466)
..+...+..+.+.+.++|+++.+|........ .+..+. ..... .+++. .-+-+.++.|+...-+
T Consensus 138 ~l~d~~~~p~~~~~~e~g~pv~iH~g~~~~~p~~~~~~~~~~~~---~~~~~~li~~gv~~r--fP~Lkii~~H~Gg~~P 212 (312)
T 3ij6_A 138 SIADKEFRPVLAQAAKLHVPLWMHPVFDARKPDNNLVFSWEYEL---SQAMLQLVQSDLFQD--YPNLKILVHHAGAMVP 212 (312)
T ss_dssp ETTSTTTHHHHHHHHHTTCCEEEECCCCTTSSSCCTTTHHHHHH---HHHHHHHHHTTHHHH--CTTCCEEESGGGTTTT
T ss_pred CCCCccHHHHHHHHHHcCCeEEEcCCCCCCCCCcccccccHHHH---HHHHHHHHHcChHhh--CCCCeEEecCCcccHH
Confidence 44556788899999999999999986432100 000000 00000 11111 2234678889764222
Q ss_pred hhHHHHH----------hcCCeEEECccchhhccCCccHHHHHHc-C-CcEEEccCCCCCCCCCCHHHHHHHHHHHhccc
Q 012333 288 TEIGLLS----------RAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 355 (466)
Q Consensus 288 ~~~~~~~----------~~g~~~~~~p~~~~~~~~~~~~~~~~~~-g-i~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~~ 355 (466)
..+.++. -.++.+.+.... ....++.+++. | -++.+|||+|-............ ..+..
T Consensus 213 ~~~~r~~~~~~~~~~~~~~nvy~dts~~~-----~~~~l~~~~~~~g~drilfgSD~P~~~~p~~~~~~~~--~~l~~-- 283 (312)
T 3ij6_A 213 FFSGRIDHILDEKHAQDFKKFYVDTAILG-----NTPALQLAIDYYGIDHVLFGTDAPFAVMPSGADQIIT--QAIND-- 283 (312)
T ss_dssp TSHHHHHHHSCHHHHHHGGGCEEECCSSS-----CHHHHHHHHHHHCGGGEECCCCBTSSSTTTCSHHHHH--HHHHT--
T ss_pred HHHHHHHHhcccchHHHcCeEEEeCCCCC-----CHHHHHHHHHhCCCCeEEEeCCCCCCcCCCcchHHHH--HHHHH--
Confidence 2222221 123333332111 11123444432 4 36899999975320001111111 11111
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 012333 356 EVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (466)
Q Consensus 356 ~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (466)
.+++.++.-+.+..|+++++|-
T Consensus 284 ----------l~l~~~~~~~i~~~NA~rl~~~ 305 (312)
T 3ij6_A 284 ----------LTISDKDKQKIFHDNYYSLIKE 305 (312)
T ss_dssp ----------SSSCHHHHHHHHTHHHHHHHCC
T ss_pred ----------cCCCHHHHHHHHHHHHHHHHhC
Confidence 1389999999999999999984
No 117
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=56.32 E-value=1.2e+02 Score=27.72 Aligned_cols=131 Identities=13% Similarity=0.117 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeE---------EEeecCChhhHHHH
Q 012333 224 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLS---------AHTVWVNHTEIGLL 293 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~H~~~~~~~~~~~~ 293 (466)
.=+++++...+.|+.+.+ |+.+.. ..+.++......+. .|...+++++++.+
T Consensus 193 ~G~~vV~emnrlGmivDlSH~s~~t------------------~~dvl~~s~~PviaSHSnaral~~h~RNl~De~l~al 254 (364)
T 3ly0_A 193 AGRRLVAECNRLKIMLDLSHLNEKG------------------FDDVARLSDAPLVATHSNAHAVTPSTRNLTDRQLAMI 254 (364)
T ss_dssp HHHHHHHHHHHHTCEEBCTTBCHHH------------------HHHHHHHCSSCCEETTCCBTTTSCCTTSBCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEcCCCCHHH------------------HHHHHHhcCCCeEEeCCchhhcCCCCCCCCHHHHHHH
Confidence 346778888899998865 654321 12222222233333 45567889999999
Q ss_pred HhcCCeEEECccchhhc--------cCCccHHHHHH-----cCC-cEEEccCCCCCC-----CCCCHHHHHHHHHHHhcc
Q 012333 294 SRAGVKVSHCPASAMRM--------LGFAPIKEMLH-----ADI-CVSLGTDGAPSN-----NRMSIVDEMYLASLINKG 354 (466)
Q Consensus 294 ~~~g~~~~~~p~~~~~~--------~~~~~~~~~~~-----~gi-~~~~gsD~~~~~-----~~~~~~~~~~~~~~~~~~ 354 (466)
++.|..+-++....+-. .....+...++ .|+ .|+||||.-... ...+-+..+.... ..+
T Consensus 255 a~~GGvigv~f~~~fl~~~~~~~~~~tl~~~~~Hi~hi~~l~G~dhVgiGsDfdG~~~p~gl~d~s~~p~L~~~L-~~r- 332 (364)
T 3ly0_A 255 RESRGMVGLNFATSFLREDGRRSAEMGWEPVLRHLDHLIDRLGEDHVGMGSDFDGATIPQGIADVTGLPALQAAM-RAH- 332 (364)
T ss_dssp HHTTCEEEECCCHHHHSTTCCCCSCCCSHHHHHHHHHHHHHHCTTSEEECCCBTTSCCCTTTCSGGGHHHHHHHH-HHH-
T ss_pred HHcCcEEEEeccHhhhcCCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCCCCHHHHHHHHHHH-HHC-
Confidence 99998877765543321 11222222222 355 599999975321 1111222222221 111
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 355 REVFANGTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 355 ~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
|+|-+++-+.+-.|.-+.+.
T Consensus 333 ------------G~se~~i~ki~g~N~lRvl~ 352 (364)
T 3ly0_A 333 ------------GYDEPLMRKLCHENWYGLLE 352 (364)
T ss_dssp ------------TCCHHHHHHHHTHHHHHHHH
T ss_pred ------------CCCHHHHHHHHhHhHHHHHH
Confidence 48999999888888877774
No 118
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=54.93 E-value=1.4e+02 Score=27.96 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEee---------cCChhhHHHH
Q 012333 224 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGLL 293 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~---------~~~~~~~~~~ 293 (466)
.=+++++...+.|+.+.+ |+.+ ....+.+.......+.+|.. .+++++++.+
T Consensus 210 ~G~~vV~eMnrlGmivDlSH~s~------------------~t~~dvl~~s~~PvIaSHSnaral~~hpRNl~De~l~~l 271 (417)
T 2rag_A 210 LGLRWLAEANRLGIVIDVSHASD------------------DVVDQSVALSKAPIIASHSGPKAVYDHPRNLDDARLKKI 271 (417)
T ss_dssp HHHHHHHHHHHHTCEEBCTTBCH------------------HHHHHHHHHCSSCCEEEEEEETTTSCCTTEECHHHHHHH
T ss_pred hHHHHHHHHHHcCCEEECCCCCH------------------HHHHHHHHhcCCCeEEecCchHhhCCCCCCCCHHHHHHH
Confidence 346778888899998865 6543 22233333444556677754 5788999999
Q ss_pred HhcCCeEEECcc
Q 012333 294 SRAGVKVSHCPA 305 (466)
Q Consensus 294 ~~~g~~~~~~p~ 305 (466)
++.|..+-++..
T Consensus 272 a~~GGvigv~f~ 283 (417)
T 2rag_A 272 ADAGGAICINSI 283 (417)
T ss_dssp HHTTCEEEECSS
T ss_pred HHcCCEEEEEEE
Confidence 999988877765
No 119
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=47.77 E-value=1.6e+02 Score=27.40 Aligned_cols=65 Identities=15% Similarity=0.066 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEE---------EeecCChhhHHHH
Q 012333 224 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSA---------HTVWVNHTEIGLL 293 (466)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------H~~~~~~~~~~~~ 293 (466)
.=+++++...+.|+.+.+ |+.+. ...+.+......++.+ |-..+++++++.+
T Consensus 172 fG~~vV~eMNrlGmiVDlSH~s~~------------------t~~dvl~~S~~PvIaSHSnaral~~hpRNl~De~lkal 233 (400)
T 3id7_A 172 FGREVVREMNREGMLVDLSHVAAT------------------TMRDALDTSTAPVIFSHSSSRAVCDHPRNIPDDVLERL 233 (400)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCHH------------------HHHHHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHTTH
T ss_pred HHHHHHHHHHHcCCeEEcCCCCHH------------------HHHHHHHhCCCCEEEecCCccccCCCCCCCCHHHHHHH
Confidence 346778888888998865 65431 1222222233334444 4556889999999
Q ss_pred HhcCCeEEECccc
Q 012333 294 SRAGVKVSHCPAS 306 (466)
Q Consensus 294 ~~~g~~~~~~p~~ 306 (466)
++.|..+-++...
T Consensus 234 a~~GGVIgvnf~~ 246 (400)
T 3id7_A 234 SANGGMAMVTFVP 246 (400)
T ss_dssp HHHTCEEEECCCH
T ss_pred HHcCCEEEEecch
Confidence 9998887766543
No 120
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=43.60 E-value=73 Score=27.04 Aligned_cols=91 Identities=11% Similarity=0.032 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeE
Q 012333 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 300 (466)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~ 300 (466)
+.+...++.+.+.+.|+++.=-....+. ..+.+..+...-+..++.+++.++.++++.+.+.|..+
T Consensus 44 ~~~~a~~~a~al~~gGi~~iEvt~~t~~--------------a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~f 109 (232)
T 4e38_A 44 NAEDIIPLGKVLAENGLPAAEITFRSDA--------------AVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATF 109 (232)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETTSTT--------------HHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCCC--------------HHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCE
Confidence 3456677777777888874322222221 12222222211124678889999999999999999999
Q ss_pred EECccchhhccCCccHHHHHHcCCcEEEcc
Q 012333 301 SHCPASAMRMLGFAPIKEMLHADICVSLGT 330 (466)
Q Consensus 301 ~~~p~~~~~~~~~~~~~~~~~~gi~~~~gs 330 (466)
++.|..... .++...+.|+++.-|.
T Consensus 110 IvsP~~~~~-----vi~~~~~~gi~~ipGv 134 (232)
T 4e38_A 110 VVSPGFNPN-----TVRACQEIGIDIVPGV 134 (232)
T ss_dssp EECSSCCHH-----HHHHHHHHTCEEECEE
T ss_pred EEeCCCCHH-----HHHHHHHcCCCEEcCC
Confidence 999986532 3455666788876543
No 121
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=29.75 E-value=2.6e+02 Score=26.77 Aligned_cols=156 Identities=11% Similarity=0.020 Sum_probs=70.7
Q ss_pred HHHHHHHHHHcCCccceeccCCcchhHHHHhhcC------------CCCchHHHHhhhccCC-CCeeEEEeecCC-hhhH
Q 012333 225 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK------------VDHGTVTFLDKIEFLQ-NNLLSAHTVWVN-HTEI 290 (466)
Q Consensus 225 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~-~~~~~~H~~~~~-~~~~ 290 (466)
+..+...+.+.|+++++|..-....+.......| ........++.+...+ .++++-|+.... .+++
T Consensus 292 l~~l~~~~~e~gw~mQlH~Ga~Rn~n~~m~~~~G~d~G~D~~~~~~~a~~L~~lL~~l~~~~~pktILy~Lnp~~y~~el 371 (497)
T 2q01_A 292 LTEMAKMSLDDGLVMQIHPGSHRNHNVGLLNSHGRDKGADIPMRTEYVDALKPLLTRLGNDPRLSIILFTLDETTYSREL 371 (497)
T ss_dssp HHHHHHHHHHHCCEEEECCCEECCCCHHHHHHTCSSSSCCEECCCCCTTTSHHHHHHHTTCTTCCEEECCSCTTHHHHTH
T ss_pred HHHHHHHHHhcCCcEEEeeccCCCCCHHHHHHcCCCCCCCCCCchHHHHHHHHHHHHHhhcCCCCeEEEeCCcchhHHHH
Confidence 3445667788899999998654443333332323 1122334455544433 455665554432 3334
Q ss_pred HHHHhcCCeEEECccchhh--ccCC-ccHHHHHHcCC---cEEEccCCCCCCC---CCCHHHHHHHHHHHhcccccccCC
Q 012333 291 GLLSRAGVKVSHCPASAMR--MLGF-APIKEMLHADI---CVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANG 361 (466)
Q Consensus 291 ~~~~~~g~~~~~~p~~~~~--~~~~-~~~~~~~~~gi---~~~~gsD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 361 (466)
..++..=-++-.-+.+-.. ..++ .-+..+.+.+. .+.+.||+....+ ...++..+....+-. ..
T Consensus 372 atlag~Fpkvq~G~~WWF~d~~~gm~~ql~~l~el~~lskfvGmlTDsRsflSy~~RheyfRRiLc~vLg~----~V--- 444 (497)
T 2q01_A 372 APLAGHYPVLKLGPSWWFHDSPEGMMRFREQVTETAGFYNTVGFNDDTRAFLSIPARHDVARRVDSAFLAR----MV--- 444 (497)
T ss_dssp HHHHTTCTTEEECCCCGGGCSHHHHHHHHHHHHHHHCSTTBCCCCCCCSCGGGHHHHHHHHHHHHHHHHHH----HH---
T ss_pred HHHHccCCccccCCchhhccChHHHHHHHHHHHHhhchhcccccccchhHhhhhhHHHHHHHHHHHHHHHH----HH---
Confidence 4443321122222221111 0111 11233334332 3557899865311 001111111111100 01
Q ss_pred CCCCCCCCHHHHHHHHh----HHHHHHcCCCC
Q 012333 362 TTDPAALPAETVLRMAT----INGAKSVLWDN 389 (466)
Q Consensus 362 ~~~~~~ls~~~al~~~T----~~~A~~lgl~~ 389 (466)
....+|.+||.+.+. .|+.++++++.
T Consensus 445 --~~~~lse~eA~r~a~~l~~~Na~r~Y~l~~ 474 (497)
T 2q01_A 445 --AEHRMDLVEAEELIVDLTYNLPKKAYKLDQ 474 (497)
T ss_dssp --HTTSSCHHHHHHHHHHHHTHHHHHHTTCCS
T ss_pred --hcCCCCHHHHHHHHHHHHHHhHHHHhCCCC
Confidence 122488888876654 58888889853
No 122
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=29.65 E-value=59 Score=17.23 Aligned_cols=22 Identities=14% Similarity=0.194 Sum_probs=18.2
Q ss_pred CCHHHHHHHHHHHHHcCCccce
Q 012333 220 ATDRLLLETRDMAREFKTGIHM 241 (466)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~ 241 (466)
-+++++.++-+.+++.++++.+
T Consensus 12 gtpeelkklkeeakkanirvtf 33 (36)
T 2ki0_A 12 GTPEELKKLKEEAKKANIRVTF 33 (36)
T ss_dssp CCHHHHHHHHHHHHHHCCCCCB
T ss_pred CCHHHHHHHHHHHHhccEEEEe
Confidence 4688999999999998888764
No 123
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=26.62 E-value=59 Score=23.15 Aligned_cols=43 Identities=16% Similarity=0.155 Sum_probs=34.6
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCccccc-----ccCCccCEEEEcCC
Q 012333 365 PAALPAETVLRMATINGAKSVLWDNDIGSL-----EAGKKADMVVVDPF 408 (466)
Q Consensus 365 ~~~ls~~~al~~~T~~~A~~lgl~~~~G~i-----~~G~~ADlvv~d~~ 408 (466)
+.+++.+++.+......|....+ .+.|.+ -+|..+++.|||.+
T Consensus 12 P~~~~~~~~~~~~a~Eka~a~eL-q~~G~~~~lWRv~G~y~nisIfdv~ 59 (96)
T 1mli_A 12 PVDMDPAKATQLKADEKELAQRL-QREGTWRHLWRIAGHYANYSVFDVP 59 (96)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH-HhCCeeEEEEEecCCccEEEEEEcC
Confidence 45689999888888888888776 345655 59999999999987
No 124
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=26.60 E-value=1.9e+02 Score=24.74 Aligned_cols=106 Identities=8% Similarity=0.082 Sum_probs=58.2
Q ss_pred HHHHhcCceeeeecCc----------cCHHHHHHHHHHhCCeEEeecccccCCCCCCcccccCChHHHHHHHHHHHHHhc
Q 012333 132 IELIHSGVTCFAEAGG----------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201 (466)
Q Consensus 132 ~~~~~~GvTtv~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (466)
..+...|+..+--.+. .....+.+.+...|+.......... .+ ........++...+.++...
T Consensus 22 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~----~~---~~~~~~~~~~~~~~~i~~A~ 94 (286)
T 3dx5_A 22 QFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLD----IS---LSADFEKTIEKCEQLAILAN 94 (286)
T ss_dssp HHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCC----CS---TTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCC----CC---CchhHHHHHHHHHHHHHHHH
Confidence 4467789887754321 1223344556667887654322211 11 11123445566666666666
Q ss_pred cCCCCCeEEEEeecccccCC-------HHHHHHHHHHHHHcCCccceecc
Q 012333 202 HAADGRIRIWFGIRQIMNAT-------DRLLLETRDMAREFKTGIHMHVA 244 (466)
Q Consensus 202 ~~~~~~i~~~~~~~~~~~~~-------~~~l~~~~~~a~~~~~~v~~H~~ 244 (466)
..+...+.+..+.......+ .+.+.++.+.|+++|+.+.+|..
T Consensus 95 ~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 144 (286)
T 3dx5_A 95 WFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETH 144 (286)
T ss_dssp HHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecC
Confidence 66666555433322211222 24467778888999999988864
No 125
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=24.63 E-value=1.3e+02 Score=26.82 Aligned_cols=128 Identities=11% Similarity=0.130 Sum_probs=71.0
Q ss_pred HHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCchHHHHhhhccCCC--------CeeEEEeecCChhhHHHHHhc
Q 012333 226 LETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN--------NLLSAHTVWVNHTEIGLLSRA 296 (466)
Q Consensus 226 ~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~H~~~~~~~~~~~~~~~ 296 (466)
+++++...+.|+.+.+ |+.+.. ..+.++.... +.+..|...+++++++.+++.
T Consensus 157 ~~vV~eMnrlGmivDlSH~s~~t------------------~~dvl~~s~~PiaSHSnaral~~h~RNl~D~~l~ala~~ 218 (318)
T 3neh_A 157 KDIIHLLNERKVFTDVSHLSVKA------------------FWETLEQAEFVIASHSNAKAICSHPRNLDDEQIKAMIEH 218 (318)
T ss_dssp HHHHHHHHHHTCEEECTTBCHHH------------------HHHHHHHCSSEEESSCCBTTTSCCTTSBCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCeEEcCCCCHHH------------------HHHHHHhcCCCcccccchhhcCCCCCCCCHHHHHHHHHc
Confidence 5677778888888864 654321 1112222222 223345667889999999999
Q ss_pred CCeEEECccchhhc-cCCccHHH-------HHHc-CC-cEEEccCCCCCCC------CCCHHHHHHHHHHHhcccccccC
Q 012333 297 GVKVSHCPASAMRM-LGFAPIKE-------MLHA-DI-CVSLGTDGAPSNN------RMSIVDEMYLASLINKGREVFAN 360 (466)
Q Consensus 297 g~~~~~~p~~~~~~-~~~~~~~~-------~~~~-gi-~~~~gsD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 360 (466)
|-.+-++....+-. .....+.. +.+. |+ .|++|||.-.... ..+-+..+... +
T Consensus 219 GGvigv~~~~~fl~~~~~~tl~~~~~Hi~hi~~l~G~dhVgiGsDfDG~~~~p~gl~d~s~~p~L~~~--L--------- 287 (318)
T 3neh_A 219 DAMIHVVFYPLFTTNNGVADTEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKGLEHVGKYQSFLET--L--------- 287 (318)
T ss_dssp TCEEEECCCHHHHCTTSCCBHHHHHHHHHHHHHTTCGGGEEECCCBTSCSSCBBTBSSGGGHHHHHHH--H---------
T ss_pred CCEEEEEeeHHhhCCCCCCCHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCCCCCHHHHHHHHHH--H---------
Confidence 98877765543321 22222322 2232 43 4999999743211 11112222111 1
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcC
Q 012333 361 GTTDPAALPAETVLRMATINGAKSVL 386 (466)
Q Consensus 361 ~~~~~~~ls~~~al~~~T~~~A~~lg 386 (466)
.+ ++|.+++-+.+-.|--+.+.
T Consensus 288 ---~~-g~se~~i~ki~g~N~lRv~~ 309 (318)
T 3neh_A 288 ---EK-HYTKEEIEGFASRNFLNHLP 309 (318)
T ss_dssp ---TT-TSCHHHHHHHHTHHHHHTCC
T ss_pred ---Hh-cCCHHHHHHHHhHhHHHHHh
Confidence 11 48888888888888777765
No 126
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=23.89 E-value=2.8e+02 Score=24.77 Aligned_cols=80 Identities=16% Similarity=0.006 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCchHHHHhhhccCCCCeeEEEeecCChhhHHHHHhcCCeEE
Q 012333 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (466)
Q Consensus 222 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~ 301 (466)
.+.|+++ .+..++++..|-.++- +.+.++.++..+.+ +....-+++++++++.+.|+. .
T Consensus 193 ~~~L~~I---~~~~~vpLVlHGgSsv---------------p~~~~~~~~~~gg~--~~~~~Gvp~e~i~~ai~~GV~-K 251 (323)
T 2isw_A 193 IDRVKTI---SDLTGIPLVMHGSSSV---------------PKDVKDMINKYGGK--MPDAVGVPIESIVHAIGEGVC-K 251 (323)
T ss_dssp CHHHHHH---HHHHCSCEEECSCCCC---------------CHHHHHHHHHTTCC--CTTCBCCCHHHHHHHHHTTEE-E
T ss_pred HHHHHHH---HHHhCCCeEEECCCCC---------------CHHHHHHHHHhccc--cccCCCCCHHHHHHHHHCCCe-E
Confidence 3445444 3344899999975532 23333444433333 233345678999999999863 3
Q ss_pred ECccchhhccCCccHHHHHHc
Q 012333 302 HCPASAMRMLGFAPIKEMLHA 322 (466)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~ 322 (466)
++-.+.++......++..+..
T Consensus 252 iNi~Tdl~~A~~~~vr~~~~~ 272 (323)
T 2isw_A 252 INVDSDSRMAMTGAIRKVFVE 272 (323)
T ss_dssp EEECHHHHHHHHHHHHHHHHH
T ss_pred EEEChHHHHHHHHHHHHHHHh
Confidence 333444443333345555433
Done!