Your job contains 1 sequence.
>012334
MAAKSPVKEPPGTSAVNPTTPLAPPPVKPELPSSSEPDVVNVPSYSRWFSFDSISECEVK
FLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTDVRRTLVGDVGSIRRVFDFL
ETWGLINYFASVKTLKWEDKETKSSAASAESSSALKETSKRLCNGCKTLCTIACFACDKY
DLTLCARCYVRGNHRVGVSSSDFRRVEISEEARSDWTEKETLQLLEAIMHFGDDWRKVAQ
HVSGKSEKDCITHFIKLPFGQEFICKESDSEDVDNKFFSINNPSDAVSESENVGATSPSK
RMRLTPLADASNPIMAQAAFLSALAGVEIAEVAARAAVTTLSDVDDRASKGSLMRNTRQQ
EAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDL
QMEEEWKQLEQVKNLLFVDQLSVLFHKSNARKNGDRTEENVKTDVS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012334
(466 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2051028 - symbol:SWI3B "switch subunit 3" spec... 1242 1.8e-126 1
TAIR|locus:2043263 - symbol:SWI3A "SWITCH/sucrose nonferm... 241 4.7e-43 3
DICTYBASE|DDB_G0277033 - symbol:swi3 "SWIRM domain-contai... 258 1.0e-40 2
ZFIN|ZDB-GENE-060503-273 - symbol:smarcc1b "SWI/SNF relat... 225 5.6e-36 4
ZFIN|ZDB-GENE-080514-3 - symbol:smarcc1a "SWI/SNF related... 236 2.3e-35 4
UNIPROTKB|F1PVA9 - symbol:SMARCC2 "Uncharacterized protei... 229 1.6e-34 3
UNIPROTKB|F1N4N6 - symbol:SMARCC2 "Uncharacterized protei... 229 1.6e-34 3
UNIPROTKB|F1SM00 - symbol:LOC100621845 "Uncharacterized p... 229 2.1e-34 3
UNIPROTKB|I3LRY4 - symbol:I3LRY4 "Uncharacterized protein... 229 2.4e-34 3
MGI|MGI:1915344 - symbol:Smarcc2 "SWI/SNF related, matrix... 229 2.4e-34 3
UNIPROTKB|Q8TAQ2 - symbol:SMARCC2 "SWI/SNF complex subuni... 229 2.4e-34 3
UNIPROTKB|F8VXC8 - symbol:SMARCC2 "SWI/SNF complex subuni... 229 2.7e-34 3
RGD|1597704 - symbol:Smarcc2 "SWI/SNF related, matrix ass... 230 2.9e-34 3
UNIPROTKB|G5EF87 - symbol:swsn-1 "SWI3-like protein" spec... 221 9.6e-34 3
WB|WBGene00004203 - symbol:swsn-1 species:6239 "Caenorhab... 221 9.8e-34 3
ASPGD|ASPL0000005061 - symbol:AN6705 species:162425 "Emer... 232 2.9e-33 3
UNIPROTKB|F1P1A8 - symbol:F1P1A8 "Uncharacterized protein... 223 2.9e-33 3
UNIPROTKB|G4MV88 - symbol:MGG_01720 "Transcription regula... 244 3.2e-33 2
UNIPROTKB|G3N0H4 - symbol:SMARCC1 "Uncharacterized protei... 222 5.0e-33 3
UNIPROTKB|F1MYU1 - symbol:SMARCC1 "Uncharacterized protei... 222 5.7e-33 3
TAIR|locus:2036942 - symbol:SWI3C "SWITCH/sucrose nonferm... 236 7.0e-33 2
FB|FBgn0002783 - symbol:mor "moira" species:7227 "Drosoph... 238 7.0e-33 3
POMBASE|SPAC17G6.10 - symbol:ssr1 "SWI/SNF and RSC comple... 234 8.8e-33 3
RGD|1304850 - symbol:Smarcc1 "SWI/SNF related, matrix ass... 222 9.8e-33 3
MGI|MGI:1203524 - symbol:Smarcc1 "SWI/SNF related, matrix... 222 1.0e-32 3
UNIPROTKB|Q92922 - symbol:SMARCC1 "SWI/SNF complex subuni... 222 1.1e-32 3
UNIPROTKB|E2REF0 - symbol:SMARCC1 "Uncharacterized protei... 222 1.1e-32 3
POMBASE|SPAC23H3.10 - symbol:ssr2 "SWI/SNF and RSC comple... 230 5.5e-31 2
CGD|CAL0002007 - symbol:orf19.4488 species:5476 "Candida ... 247 7.8e-29 2
SGD|S000001933 - symbol:RSC8 "Component of the RSC chroma... 195 1.2e-28 3
SGD|S000003712 - symbol:SWI3 "Subunit of the SWI/SNF chro... 233 4.3e-28 3
CGD|CAL0003837 - symbol:orf19.7234 species:5476 "Candida ... 219 3.3e-26 4
DICTYBASE|DDB_G0288285 - symbol:mybX "myb domain-containi... 215 3.2e-21 2
UNIPROTKB|I3LJ29 - symbol:SMARCC1 "Uncharacterized protei... 222 1.6e-16 2
UNIPROTKB|F1SLI6 - symbol:LOC100626030 "Uncharacterized p... 222 5.7e-16 2
UNIPROTKB|I3LNI6 - symbol:LOC100737447 "Uncharacterized p... 100 3.2e-07 2
UNIPROTKB|E1C6E2 - symbol:TADA2A "Transcriptional adapter... 133 7.4e-06 2
UNIPROTKB|F1P5V3 - symbol:TADA2A "Transcriptional adapter... 133 7.5e-06 2
UNIPROTKB|Q5ZJF3 - symbol:TADA2A "Transcriptional adapter... 133 7.6e-06 2
MGI|MGI:2144471 - symbol:Tada2a "transcriptional adaptor ... 131 9.8e-06 2
ZFIN|ZDB-GENE-060929-508 - symbol:tada2a "transcriptional... 136 1.1e-05 2
UNIPROTKB|F1S1A3 - symbol:TADA2A "Uncharacterized protein... 125 2.9e-05 2
UNIPROTKB|Q3SZP8 - symbol:TADA2A "Transcriptional adapter... 125 4.6e-05 2
UNIPROTKB|F1PBY0 - symbol:TADA2A "Uncharacterized protein... 125 4.6e-05 2
UNIPROTKB|O75478 - symbol:TADA2A "Transcriptional adapter... 125 4.6e-05 2
RGD|1309959 - symbol:Tada2a "transcriptional adaptor 2A" ... 125 4.6e-05 2
UNIPROTKB|Q6AYE3 - symbol:Tada2a "Transcriptional adapter... 125 4.6e-05 2
UNIPROTKB|F1S1A4 - symbol:F1S1A4 "Uncharacterized protein... 125 8.1e-05 1
SGD|S000002856 - symbol:ADA2 "Transcription coactivator" ... 120 0.00028 1
>TAIR|locus:2051028 [details] [associations]
symbol:SWI3B "switch subunit 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0016514 "SWI/SNF complex" evidence=ISS] [GO:0040029 "regulation
of gene expression, epigenetic" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 GO:GO:0007275 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 EMBL:AC002332 HSSP:P32591
eggNOG:COG5259 KO:K11649 OMA:LCARCYV EMBL:BT004085 EMBL:BT005094
IPI:IPI00525437 PIR:F84747 RefSeq:NP_180919.2 UniGene:At.43725
ProteinModelPortal:Q84JG2 SMR:Q84JG2 IntAct:Q84JG2 STRING:Q84JG2
PaxDb:Q84JG2 PRIDE:Q84JG2 EnsemblPlants:AT2G33610.1 GeneID:817927
KEGG:ath:AT2G33610 TAIR:At2g33610 HOGENOM:HOG000238867
InParanoid:Q84JG2 PhylomeDB:Q84JG2 ProtClustDB:CLSN2680010
Genevestigator:Q84JG2 Uniprot:Q84JG2
Length = 469
Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
Identities = 246/427 (57%), Positives = 308/427 (72%)
Query: 38 DVVNVPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKI 97
D ++VPSYS WFS+ I++CEV+ LPEFFDSRS SKNP+ Y Y R+SI+K YR++ RKI
Sbjct: 46 DNIHVPSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKI 105
Query: 98 TFTDVRRTLVGDVGSIRRVFDFLETWGLINY--FASVKTLKWXXXXXXXXXXXXXX--XX 153
+FTDVRRTLV DV SIRRVFDFL++WGLINY AS K LKW
Sbjct: 106 SFTDVRRTLVSDVVSIRRVFDFLDSWGLINYNSSASAKPLKWEEKEAGKSAGDAASEPAT 165
Query: 154 XXXXXXXRLCNGCKTLCTIACFACDKYDLTLCARCYVRGNHRVGVSSSDFRRVEISEEAR 213
R CNGCK +C+IACFACDKYDLTLCARCYVR N+RVG++SS+F+RVEISEE++
Sbjct: 166 TVKETAKRNCNGCKAICSIACFACDKYDLTLCARCYVRSNYRVGINSSEFKRVEISEESK 225
Query: 214 SDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSEDV 273
+W++KE L LLEA+MH+GDDW+KVA HV G++EKDC++ F+KLPFG++F+ KESDSED
Sbjct: 226 PEWSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFV-KESDSEDG 284
Query: 274 DNKFFSINNPSDAVSESENVG--ATSPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXX 331
F I + SD + ESE + +SP+KR++LTPLADASNPIMAQAAFLSAL
Sbjct: 285 LEMFDQIKD-SD-IPESEGIDKDGSSPNKRIKLTPLADASNPIMAQAAFLSALAGTNVAE 342
Query: 332 XXXXXXXTTLSDVDDRASKGSLMRNTRQQEAGVASNGDATQNALARASVDASSLIEKEEL 391
LSDVD A K + R+ +Q+A AS+G+ T+N RA DA SLIEKEE
Sbjct: 343 AAARAAVRALSDVDYEADKNA-SRDPNRQDANAASSGETTRNESERAWADAKSLIEKEEH 401
Query: 392 DVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFHKSNAR 451
+VE AI VEV+MK+I+D+I+ FE LDL+ME KQLE+V+NLLFVDQL++ FH AR
Sbjct: 402 EVEGAIKETVEVEMKKIRDRIVHFEKLDLEMERSRKQLEEVRNLLFVDQLNIFFHTRKAR 461
Query: 452 KNGDRTE 458
K DR E
Sbjct: 462 KTEDRIE 468
>TAIR|locus:2043263 [details] [associations]
symbol:SWI3A "SWITCH/sucrose nonfermenting 3A"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0016514 "SWI/SNF complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0007275 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
EMBL:AC002535 HSSP:P32591 eggNOG:COG5259 KO:K11649 EMBL:AY062794
EMBL:AY081570 IPI:IPI00529579 PIR:T00422 RefSeq:NP_850476.1
UniGene:At.27229 ProteinModelPortal:Q8W475 SMR:Q8W475 IntAct:Q8W475
STRING:Q8W475 PaxDb:Q8W475 PRIDE:Q8W475 EnsemblPlants:AT2G47620.1
GeneID:819375 KEGG:ath:AT2G47620 TAIR:At2g47620
HOGENOM:HOG000083881 InParanoid:Q8W475 OMA:SCPKEIF PhylomeDB:Q8W475
ProtClustDB:CLSN2680302 Genevestigator:Q8W475 Uniprot:Q8W475
Length = 512
Score = 241 (89.9 bits), Expect = 4.7e-43, Sum P(3) = 4.7e-43
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 38 DVVNVPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKI 97
++ +P+ S WF +D I E E + EFF S ++ P+VY+ YRD I+ +RE+ R++
Sbjct: 11 ELYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRL 70
Query: 98 TFTDVRRTLVGDVGSIRRVFDFLETWGLINYFASVK 133
TFT VR+ LVGDV +++VF FLE WGLIN+ +S+K
Sbjct: 71 TFTSVRKFLVGDVNLLQKVFLFLEKWGLINFSSSLK 106
Score = 199 (75.1 bits), Expect = 4.7e-43, Sum P(3) = 4.7e-43
Identities = 47/175 (26%), Positives = 85/175 (48%)
Query: 162 LCNGCKTLCTIACFACDKYDLTLCARCYVRGNHRVGVSSSDFRRVEISEEARSDWTEKET 221
+C C C + +K + +C +C+ GN+ ++ DF+ I A + WTE+E
Sbjct: 176 VCAHCGERCDSPFYQHNKGIVNICEKCFKNGNYGENNTADDFKL--IGNSAAAVWTEEEI 233
Query: 222 LQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQ------------EFICKESD 269
L LLE+++ GDDW ++Q VS KS DCI+ I+LPFG+ + ++ +
Sbjct: 234 LLLLESVLKHGDDWELISQSVSTKSRLDCISKLIELPFGEFLMGSASGRLNPSILTEDEN 293
Query: 270 SEDVDNKFFSINNPSDAVSESENVGATSP-SKRMRLTPLADASNPIMAQAAFLSA 323
+E V + + V P +KR R+ +++ + +M Q A +++
Sbjct: 294 TEQVQTDGQEHEETETREEKEDRVNEDEPPAKRKRVALISEGDSSLMKQVAAMAS 348
Score = 117 (46.2 bits), Expect = 4.7e-43, Sum P(3) = 4.7e-43
Identities = 28/86 (32%), Positives = 50/86 (58%)
Query: 374 ALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVK 433
AL A+ A L ++EE ++E+ + ++E Q+K++Q K+ + L+ M+EE K +E VK
Sbjct: 424 ALGAAAAQAKILADQEEREMEQLAATVIEQQLKKLQSKLKFLDDLESIMDEEEKVIEGVK 483
Query: 434 NLLFVDQLSVL--FHKSNARKNGDRT 457
+ +++SVL +S K D T
Sbjct: 484 ETIIQERVSVLQCAFRSGITKRWDHT 509
>DICTYBASE|DDB_G0277033 [details] [associations]
symbol:swi3 "SWIRM domain-containing protein Swi3"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 InterPro:IPR001357 dictyBase:DDB_G0277033
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000019 SUPFAM:SSF52113 eggNOG:COG5259
KO:K11649 RefSeq:XP_642866.1 ProteinModelPortal:Q550R6 SMR:Q550R6
PRIDE:Q550R6 EnsemblProtists:DDB0219999 GeneID:8620732
KEGG:ddi:DDB_G0277033 InParanoid:Q550R6 OMA:QTTIDMP
ProtClustDB:CLSZ2430855 Uniprot:Q550R6
Length = 1223
Score = 258 (95.9 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 73/275 (26%), Positives = 127/275 (46%)
Query: 182 LTLCARCYVRGNHRVGVS---SSDFRRVEISEEA--RSDWTEKETLQLLEAIMHFGDDWR 236
+ LC C+ + S F+++E+ E + WT++ETL LLEA+ + D W
Sbjct: 881 ILLCNNCFTNDQTFIDHSHLIKDQFKKIELPEPSPLEDQWTDQETLLLLEALDIYSDSWN 940
Query: 237 KVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSEDVDNKFFSINNPSDAVSESENVGAT 296
VA HV KS++ C+ F+KLP + ++ ED K S+ PS S S G++
Sbjct: 941 DVADHVKTKSKEQCLLQFLKLPIEEPYL------EDNITKSISLQPPS---SNSILNGSS 991
Query: 297 SPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLS--DVDDRASKGSLM 354
S + +NPI++ +FLS L+ + D +
Sbjct: 992 SNNNNNNNNNQQLLNNPIVSMISFLSTSVSSEVASAAAKAATDVLNKENGDSMITDNDND 1051
Query: 355 RNTRQQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIR 414
N + + + AT LA S+ A +L + EE +++ I I+ VQ K+++ K+
Sbjct: 1052 DNDHLSKVNIQAAASAT---LAATSIKAKALSKSEEREIQSLILKIINVQTKKLELKLKC 1108
Query: 415 FESLDLQMEEEWKQLEQVKNLLFVDQLSVLFHKSN 449
+ ++ +E+E QLE+ + LF ++ S+L N
Sbjct: 1109 YSEMENALEKEKNQLEKERQALFSERFSLLKASQN 1143
Score = 251 (93.4 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 48/89 (53%), Positives = 58/89 (65%)
Query: 43 PSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTDV 102
PS WF + I E E LPEFF +SPSK P VY+ YRD ++ Y +NP + +T T +
Sbjct: 644 PSQCTWFKMERIHEVEKNQLPEFFTGKSPSKTPEVYKEYRDFMINTYLQNPYQYLTLTAI 703
Query: 103 RRTLVGDVGSIRRVFDFLETWGLINYFAS 131
RR LVGDV SI RV FLE WGLINYF +
Sbjct: 704 RRNLVGDVCSILRVHSFLEHWGLINYFVN 732
Score = 43 (20.2 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 79 RYYRDSIVKHYRENPSRKITFTDVRRTLVGDVGSIRRVFDFLET 122
++Y D+ K+ + PS K T + L+ D + +F L+T
Sbjct: 80 QFYEDAFGKNATDKPSNK---TKLPMKLLKDYSTNGSLFHVLDT 120
>ZFIN|ZDB-GENE-060503-273 [details] [associations]
symbol:smarcc1b "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily c,
member 1b" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 InterPro:IPR001357
ZFIN:ZDB-GENE-060503-273 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:CR626876 EMBL:CR626877 IPI:IPI00972005
Ensembl:ENSDART00000085619 Bgee:E7FAW0 Uniprot:E7FAW0
Length = 961
Score = 225 (84.3 bits), Expect = 5.6e-36, Sum P(4) = 5.6e-36
Identities = 41/87 (47%), Positives = 57/87 (65%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
VP+Y+ WF ++ I + E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 427 VPTYASWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTS 486
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV ++ RV FLE WGLINY
Sbjct: 487 SRRNLTGDVCALIRVHSFLEQWGLINY 513
Score = 153 (58.9 bits), Expect = 5.6e-36, Sum P(4) = 5.6e-36
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFI 264
A +WTE+ETL LLEA+ + DDW KV++HV +++ DCI HF++LP ++
Sbjct: 594 AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYL 646
Score = 118 (46.6 bits), Expect = 5.6e-36, Sum P(4) = 5.6e-36
Identities = 32/120 (26%), Positives = 58/120 (48%)
Query: 343 DVDDRASKGSLMRNTRQQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVE 402
D+ +G M+ + + S A ALA A+ A L EE ++ ++ +VE
Sbjct: 798 DMSLTQGEGEQMKRRLELDVVEGSIATAAAAALASAATKAKHLAAVEERKIKSLVALLVE 857
Query: 403 VQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFHKSNARKNGDRTEENVK 462
QMK+++ K+ FE L+ M+ E + LEQ + L ++ + FH + + +NV+
Sbjct: 858 TQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQT--FHLEQVKYAEQKVRQNVE 915
Score = 49 (22.3 bits), Expect = 5.6e-36, Sum P(4) = 5.6e-36
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 291 ENVGATSPSKRMRLTPLADASNPIMAQAAFLSAL 324
EN A+ + P + + NP+M+ AFL+++
Sbjct: 647 ENSEASMGPLAYQPVPFSQSGNPVMSTVAFLASV 680
Score = 44 (20.5 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 15/49 (30%), Positives = 19/49 (38%)
Query: 275 NKFFSINNPSDAVSESENVGATSPSKRMRLTPLADASNPIMAQAAFLSA 323
N FS N P ++ S G KR + + S A AA SA
Sbjct: 785 NIHFSSNTPEESFDMSLTQGEGEQMKRRLELDVVEGSIATAAAAALASA 833
>ZFIN|ZDB-GENE-080514-3 [details] [associations]
symbol:smarcc1a "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily c, member 1a"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
ZFIN:ZDB-GENE-080514-3 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 KO:K11649
GeneTree:ENSGT00390000018166 EMBL:CR391962 IPI:IPI00972152
RefSeq:XP_003200294.1 UniGene:Dr.76866 PRIDE:F1Q9K1
Ensembl:ENSDART00000109259 GeneID:403020 KEGG:dre:403020 CTD:403020
NextBio:20816825 ArrayExpress:F1Q9K1 Bgee:F1Q9K1 Uniprot:F1Q9K1
Length = 1089
Score = 236 (88.1 bits), Expect = 2.3e-35, Sum P(4) = 2.3e-35
Identities = 42/87 (48%), Positives = 58/87 (66%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++SI E E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 446 IPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTS 505
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV ++ RV FLE WGL+NY
Sbjct: 506 CRRNLTGDVCAVMRVHAFLEQWGLVNY 532
Score = 158 (60.7 bits), Expect = 2.3e-35, Sum P(4) = 2.3e-35
Identities = 26/56 (46%), Positives = 42/56 (75%)
Query: 215 DWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDS 270
DWTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP +++ + SD+
Sbjct: 616 DWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDQYL-ESSDA 670
Score = 98 (39.6 bits), Expect = 2.3e-35, Sum P(4) = 2.3e-35
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 361 EAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDL 420
+ G + A ALA A+ A L EE ++ ++ +VE QMK+++ K+ FE L+
Sbjct: 864 DIGEGNIATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLELKLRHFEELET 923
Query: 421 QMEEEWKQLEQVKNLLFVDQLSVLFH 446
M+ E + LE + L ++ + FH
Sbjct: 924 IMDREKEALELQRQQLLTERQA--FH 947
Score = 47 (21.6 bits), Expect = 2.3e-35, Sum P(4) = 2.3e-35
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 306 PLADASNPIMAQAAFLSAL 324
P + + NP+M+ AFL+++
Sbjct: 681 PFSQSGNPVMSTVAFLASV 699
>UNIPROTKB|F1PVA9 [details] [associations]
symbol:SMARCC2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
OMA:QYIQAEP EMBL:AAEX03006920 Ensembl:ENSCAFT00000000173
Uniprot:F1PVA9
Length = 1092
Score = 229 (85.7 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 42/87 (48%), Positives = 57/87 (65%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++S+ E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 419 IPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 478
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV +I RV FLE WGLINY
Sbjct: 479 CRRNLAGDVCAIMRVHAFLEQWGLINY 505
Score = 152 (58.6 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSE 271
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ DSE
Sbjct: 590 ATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL---EDSE 646
Score = 114 (45.2 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 355 RNTR-QQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKII 413
R T+ +++ G + A ALA A+V A L EE ++ ++ +VE QMK+++ K+
Sbjct: 838 RKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLR 897
Query: 414 RFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFH 446
FE L+ M+ E + LE + L D+ + FH
Sbjct: 898 HFEELETIMDREREALEYQRQQLLADRQA--FH 928
Score = 55 (24.4 bits), Expect = 2.1e-28, Sum P(3) = 2.1e-28
Identities = 21/108 (19%), Positives = 39/108 (36%)
Query: 306 PLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASKGSLMRNTRQQEAGVA 365
P + + NP+M+ AFL+++ S + + + + R+ E
Sbjct: 658 PFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAK 717
Query: 366 SNGDAT------QNALARASVDASSLIEKEELDVEKAISGIVEVQMKE 407
G A + +A + D IE+ D +A G + KE
Sbjct: 718 VTGKADPAFGLESSGIAGTTSDEPERIEESGTDEARA-EGQATEEKKE 764
Score = 37 (18.1 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 378 ASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
AS A S +E+ E+ + +VE ++++++
Sbjct: 682 ASAAAKSALEEFSKMKEEVPTALVEAHVRKVEE 714
>UNIPROTKB|F1N4N6 [details] [associations]
symbol:SMARCC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
SMART:SM00717 InterPro:IPR001357 GO:GO:0017053 GO:GO:0045892
GO:GO:0045893 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GeneTree:ENSGT00390000018166 OMA:QYIQAEP EMBL:DAAA02013534
IPI:IPI00712028 Ensembl:ENSBTAT00000019562 Uniprot:F1N4N6
Length = 1094
Score = 229 (85.7 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 42/87 (48%), Positives = 57/87 (65%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++S+ E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 390 IPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 449
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV +I RV FLE WGLINY
Sbjct: 450 CRRNLAGDVCAIMRVHAFLEQWGLINY 476
Score = 152 (58.6 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSE 271
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ DSE
Sbjct: 592 ATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL---EDSE 648
Score = 114 (45.2 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 355 RNTR-QQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKII 413
R T+ +++ G + A ALA A+V A L EE ++ ++ +VE QMK+++ K+
Sbjct: 840 RKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLR 899
Query: 414 RFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFH 446
FE L+ M+ E + LE + L D+ + FH
Sbjct: 900 HFEELETIMDREREALEYQRQQLLADRQA--FH 930
Score = 53 (23.7 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 306 PLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASKGSLMRNTRQQEAGVA 365
P + + NP+M+ AFL+++ S + + + + R+ E
Sbjct: 660 PFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAK 719
Query: 366 SNGDAT------QNALARASVDASSLIEKEELDVEKA 396
G A + +A + D IE+ D +A
Sbjct: 720 VTGKADPAFGLESSGIAGTTSDEPERIEESGTDEARA 756
Score = 37 (18.1 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 378 ASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
AS A S +E+ E+ + +VE ++++++
Sbjct: 684 ASAAAKSALEEFSKMKEEVPTALVEAHVRKVEE 716
>UNIPROTKB|F1SM00 [details] [associations]
symbol:LOC100621845 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:CU498845 Ensembl:ENSSSCT00000000410 OMA:AWFDYNX Uniprot:F1SM00
Length = 1167
Score = 229 (85.7 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 42/87 (48%), Positives = 57/87 (65%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++S+ E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 438 IPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 497
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV +I RV FLE WGLINY
Sbjct: 498 CRRNLAGDVCAIMRVHAFLEQWGLINY 524
Score = 152 (58.6 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSE 271
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ DSE
Sbjct: 640 ATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL---EDSE 696
Score = 114 (45.2 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 355 RNTR-QQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKII 413
R T+ +++ G + A ALA A+V A L EE ++ ++ +VE QMK+++ K+
Sbjct: 891 RKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLR 950
Query: 414 RFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFH 446
FE L+ M+ E + LE + L D+ + FH
Sbjct: 951 HFEELETIMDREREALEYQRQQLLADRQA--FH 981
Score = 54 (24.1 bits), Expect = 3.4e-28, Sum P(3) = 3.4e-28
Identities = 16/92 (17%), Positives = 35/92 (38%)
Query: 306 PLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASKGSLMRNTRQQEAGVA 365
P + + NP+M+ AFL+++ S + + + + R+ E
Sbjct: 708 PFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAK 767
Query: 366 SNGDATQN-ALARASVDASSLIEKEELDVEKA 396
G A L + + ++ E E + E++
Sbjct: 768 VTGKADPAFGLESSGIAGTTSDEPERIGPEES 799
Score = 37 (18.1 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 378 ASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
AS A S +E+ E+ + +VE ++++++
Sbjct: 732 ASAAAKSALEEFSKMKEEVPTALVEAHVRKVEE 764
>UNIPROTKB|I3LRY4 [details] [associations]
symbol:I3LRY4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
OMA:QYIQAEP EMBL:CU694915 Ensembl:ENSSSCT00000032096 Uniprot:I3LRY4
Length = 1212
Score = 229 (85.7 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 42/87 (48%), Positives = 57/87 (65%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++S+ E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 392 IPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 451
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV +I RV FLE WGLINY
Sbjct: 452 CRRNLAGDVCAIMRVHAFLEQWGLINY 478
Score = 152 (58.6 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSE 271
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ DSE
Sbjct: 594 ATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL---EDSE 650
Score = 114 (45.2 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 355 RNTR-QQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKII 413
R T+ +++ G + A ALA A+V A L EE ++ ++ +VE QMK+++ K+
Sbjct: 845 RKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLR 904
Query: 414 RFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFH 446
FE L+ M+ E + LE + L D+ + FH
Sbjct: 905 HFEELETIMDREREALEYQRQQLLADRQA--FH 935
Score = 54 (24.1 bits), Expect = 4.0e-28, Sum P(3) = 4.0e-28
Identities = 16/92 (17%), Positives = 35/92 (38%)
Query: 306 PLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASKGSLMRNTRQQEAGVA 365
P + + NP+M+ AFL+++ S + + + + R+ E
Sbjct: 662 PFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAK 721
Query: 366 SNGDATQN-ALARASVDASSLIEKEELDVEKA 396
G A L + + ++ E E + E++
Sbjct: 722 VTGKADPAFGLESSGIAGTTSDEPERIGPEES 753
Score = 37 (18.1 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 378 ASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
AS A S +E+ E+ + +VE ++++++
Sbjct: 686 ASAAAKSALEEFSKMKEEVPTALVEAHVRKVEE 718
>MGI|MGI:1915344 [details] [associations]
symbol:Smarcc2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 2"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=IDA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
MGI:MGI:1915344 GO:GO:0017053 GO:GO:0045892 GO:GO:0045893
GO:GO:0007399 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
eggNOG:COG5259 HOGENOM:HOG000047736 HOVERGEN:HBG054849 KO:K11649
GeneTree:ENSGT00390000018166 OrthoDB:EOG4JHCF5 CTD:6601
ChiTaRS:SMARCC2 EMBL:BC058720 EMBL:BC062102 IPI:IPI00381019
IPI:IPI00459742 RefSeq:NP_001107568.1 RefSeq:NP_001107569.1
RefSeq:NP_937803.1 UniGene:Mm.417338 ProteinModelPortal:Q6PDG5
SMR:Q6PDG5 DIP:DIP-48884N IntAct:Q6PDG5 STRING:Q6PDG5
PhosphoSite:Q6PDG5 PaxDb:Q6PDG5 PRIDE:Q6PDG5
Ensembl:ENSMUST00000026433 Ensembl:ENSMUST00000105235 GeneID:68094
KEGG:mmu:68094 UCSC:uc007hmw.2 UCSC:uc007hmx.2 InParanoid:Q6PDG5
OMA:QYIQAEP NextBio:326404 Bgee:Q6PDG5 Genevestigator:Q6PDG5
GermOnline:ENSMUSG00000025369 Uniprot:Q6PDG5
Length = 1213
Score = 229 (85.7 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 42/87 (48%), Positives = 57/87 (65%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++S+ E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 426 IPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 485
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV +I RV FLE WGLINY
Sbjct: 486 CRRNLAGDVCAIMRVHAFLEQWGLINY 512
Score = 152 (58.6 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSE 271
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ DSE
Sbjct: 597 ATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL---EDSE 653
Score = 114 (45.2 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 355 RNTR-QQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKII 413
R T+ +++ G + A ALA A+V A L EE ++ ++ +VE QMK+++ K+
Sbjct: 845 RKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLR 904
Query: 414 RFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFH 446
FE L+ M+ E + LE + L D+ + FH
Sbjct: 905 HFEELETIMDREREALEYQRQQLLADRQA--FH 935
Score = 52 (23.4 bits), Expect = 6.4e-28, Sum P(3) = 6.4e-28
Identities = 15/88 (17%), Positives = 33/88 (37%)
Query: 306 PLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASKGSLMRNTRQQEAGVA 365
P + + NP+M+ AFL+++ S + + + + R+ E
Sbjct: 665 PFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAK 724
Query: 366 SNGDATQN-ALARASVDASSLIEKEELD 392
G A L + + ++ E E ++
Sbjct: 725 VTGKADPAFGLESSGIAGTASDEPERIE 752
Score = 37 (18.1 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 378 ASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
AS A S +E+ E+ + +VE ++++++
Sbjct: 689 ASAAAKSALEEFSKMKEEVPTALVEAHVRKVEE 721
>UNIPROTKB|Q8TAQ2 [details] [associations]
symbol:SMARCC2 "SWI/SNF complex subunit SMARCC2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IDA] [GO:0016514 "SWI/SNF complex"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0017053
"transcriptional repressor complex" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0003713
"transcription coactivator activity" evidence=NAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0045892 GO:GO:0045893 GO:GO:0007399 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0003713 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
eggNOG:COG5259 UniGene:Hs.632717 EMBL:AC073896 HOGENOM:HOG000047736
HOVERGEN:HBG054849 KO:K11649 EMBL:U66616 EMBL:BT009924
EMBL:AB209006 EMBL:BC009067 EMBL:BC013045 EMBL:BC026222
IPI:IPI00150057 IPI:IPI00216047 IPI:IPI00793163
RefSeq:NP_001123892.1 RefSeq:NP_003066.2 RefSeq:NP_620706.1
UniGene:Hs.236030 ProteinModelPortal:Q8TAQ2 SMR:Q8TAQ2
DIP:DIP-27611N IntAct:Q8TAQ2 MINT:MINT-1151033 STRING:Q8TAQ2
PhosphoSite:Q8TAQ2 DMDM:57012959 PaxDb:Q8TAQ2 PeptideAtlas:Q8TAQ2
PRIDE:Q8TAQ2 DNASU:6601 Ensembl:ENST00000267064
Ensembl:ENST00000347471 Ensembl:ENST00000394023 GeneID:6601
KEGG:hsa:6601 UCSC:uc001ska.3 UCSC:uc001skb.3 CTD:6601
GeneCards:GC12M056555 HGNC:HGNC:11105 HPA:CAB004321 HPA:HPA021213
MIM:601734 neXtProt:NX_Q8TAQ2 PharmGKB:PA35955 InParanoid:Q8TAQ2
PhylomeDB:Q8TAQ2 ChiTaRS:SMARCC2 GenomeRNAi:6601 NextBio:25677
ArrayExpress:Q8TAQ2 Bgee:Q8TAQ2 CleanEx:HS_SMARCC2
Genevestigator:Q8TAQ2 GermOnline:ENSG00000139613 Uniprot:Q8TAQ2
Length = 1214
Score = 229 (85.7 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 42/87 (48%), Positives = 57/87 (65%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++S+ E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 426 IPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 485
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV +I RV FLE WGLINY
Sbjct: 486 CRRNLAGDVCAIMRVHAFLEQWGLINY 512
Score = 152 (58.6 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSE 271
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ DSE
Sbjct: 597 ATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL---EDSE 653
Score = 114 (45.2 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 355 RNTR-QQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKII 413
R T+ +++ G + A ALA A+V A L EE ++ ++ +VE QMK+++ K+
Sbjct: 845 RKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLR 904
Query: 414 RFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFH 446
FE L+ M+ E + LE + L D+ + FH
Sbjct: 905 HFEELETIMDREREALEYQRQQLLADRQA--FH 935
Score = 55 (24.4 bits), Expect = 3.1e-28, Sum P(3) = 3.1e-28
Identities = 21/108 (19%), Positives = 39/108 (36%)
Query: 306 PLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASKGSLMRNTRQQEAGVA 365
P + + NP+M+ AFL+++ S + + + + R+ E
Sbjct: 665 PFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAK 724
Query: 366 SNGDAT------QNALARASVDASSLIEKEELDVEKAISGIVEVQMKE 407
G A + +A + D IE+ D E + G + KE
Sbjct: 725 VTGKADPAFGLESSGIAGTTSDEPERIEESGND-EARVEGQATDEKKE 771
Score = 37 (18.1 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 378 ASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
AS A S +E+ E+ + +VE ++++++
Sbjct: 689 ASAAAKSALEEFSKMKEEVPTALVEAHVRKVEE 721
>UNIPROTKB|F8VXC8 [details] [associations]
symbol:SMARCC2 "SWI/SNF complex subunit SMARCC2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 EMBL:AC073896 HGNC:HGNC:11105
ChiTaRS:SMARCC2 OMA:QYIQAEP IPI:IPI01021606
ProteinModelPortal:F8VXC8 SMR:F8VXC8 PRIDE:F8VXC8
Ensembl:ENST00000550164 ArrayExpress:F8VXC8 Bgee:F8VXC8
Uniprot:F8VXC8
Length = 1245
Score = 229 (85.7 bits), Expect = 2.7e-34, Sum P(3) = 2.7e-34
Identities = 42/87 (48%), Positives = 57/87 (65%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++S+ E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 426 IPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 485
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV +I RV FLE WGLINY
Sbjct: 486 CRRNLAGDVCAIMRVHAFLEQWGLINY 512
Score = 152 (58.6 bits), Expect = 2.7e-34, Sum P(3) = 2.7e-34
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSE 271
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ DSE
Sbjct: 628 ATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL---EDSE 684
Score = 114 (45.2 bits), Expect = 2.7e-34, Sum P(3) = 2.7e-34
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 355 RNTR-QQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKII 413
R T+ +++ G + A ALA A+V A L EE ++ ++ +VE QMK+++ K+
Sbjct: 876 RKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLR 935
Query: 414 RFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFH 446
FE L+ M+ E + LE + L D+ + FH
Sbjct: 936 HFEELETIMDREREALEYQRQQLLADRQA--FH 966
Score = 55 (24.4 bits), Expect = 3.5e-28, Sum P(3) = 3.5e-28
Identities = 21/108 (19%), Positives = 39/108 (36%)
Query: 306 PLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASKGSLMRNTRQQEAGVA 365
P + + NP+M+ AFL+++ S + + + + R+ E
Sbjct: 696 PFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAK 755
Query: 366 SNGDAT------QNALARASVDASSLIEKEELDVEKAISGIVEVQMKE 407
G A + +A + D IE+ D E + G + KE
Sbjct: 756 VTGKADPAFGLESSGIAGTTSDEPERIEESGND-EARVEGQATDEKKE 802
Score = 37 (18.1 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 378 ASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
AS A S +E+ E+ + +VE ++++++
Sbjct: 720 ASAAAKSALEEFSKMKEEVPTALVEAHVRKVEE 752
>RGD|1597704 [details] [associations]
symbol:Smarcc2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO] [GO:0071565 "nBAF complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0017053 "transcriptional repressor
complex" evidence=ISO] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
RGD:1597704 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 KO:K11649
GeneTree:ENSGT00390000018166 IPI:IPI00393081 RefSeq:XP_001055673.1
ProteinModelPortal:D4A510 PhosphoSite:D4A510
Ensembl:ENSRNOT00000028244 GeneID:685179 KEGG:rno:685179
UCSC:RGD:1597704 NextBio:729140 ArrayExpress:D4A510 Uniprot:D4A510
Length = 1135
Score = 230 (86.0 bits), Expect = 2.9e-34, Sum P(3) = 2.9e-34
Identities = 43/87 (49%), Positives = 57/87 (65%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
VPSY+ WF ++S+ E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 426 VPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 485
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV +I RV FLE WGLINY
Sbjct: 486 CRRNLAGDVCAIMRVHAFLEQWGLINY 512
Score = 152 (58.6 bits), Expect = 2.9e-34, Sum P(3) = 2.9e-34
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSE 271
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ DSE
Sbjct: 628 ATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL---EDSE 684
Score = 111 (44.1 bits), Expect = 2.9e-34, Sum P(3) = 2.9e-34
Identities = 28/88 (31%), Positives = 48/88 (54%)
Query: 359 QQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESL 418
+++ G + A ALA A+V A L EE ++ ++ +VE QMK+++ K+ FE L
Sbjct: 881 ERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEEL 940
Query: 419 DLQMEEEWKQLEQVKNLLFVDQLSVLFH 446
+ M+ E + LE + L D+ + FH
Sbjct: 941 ETIMDREREALEYQRQQLLADRQA--FH 966
Score = 52 (23.4 bits), Expect = 3.7e-28, Sum P(3) = 3.7e-28
Identities = 15/88 (17%), Positives = 33/88 (37%)
Query: 306 PLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASKGSLMRNTRQQEAGVA 365
P + + NP+M+ AFL+++ S + + + + R+ E
Sbjct: 696 PFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAK 755
Query: 366 SNGDATQN-ALARASVDASSLIEKEELD 392
G A L + + ++ E E ++
Sbjct: 756 VTGKADPAFGLESSGIAGTASDEPERIE 783
Score = 37 (18.1 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 378 ASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
AS A S +E+ E+ + +VE ++++++
Sbjct: 720 ASAAAKSALEEFSKMKEEVPTALVEAHVRKVEE 752
>UNIPROTKB|G5EF87 [details] [associations]
symbol:swsn-1 "SWI3-like protein" species:6239
"Caenorhabditis elegans" [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003677 GO:GO:0040018
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 GeneTree:ENSGT00390000018166 EMBL:AF230279
PIR:T26449 RefSeq:NP_001256906.1 UniGene:Cel.7072 SMR:G5EF87
IntAct:G5EF87 EnsemblMetazoa:Y113G7B.23 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 WormBase:Y113G7B.23a
OMA:HFDELEQ NextBio:908892 Uniprot:G5EF87
Length = 789
Score = 221 (82.9 bits), Expect = 9.6e-34, Sum P(3) = 9.6e-34
Identities = 42/87 (48%), Positives = 58/87 (66%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
VPSY+ WF +++I + E + +PEFF+ ++ SK P VY YR+ +V YR NP ++ T
Sbjct: 85 VPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTPDVYVAYRNFMVDTYRLNPFEYVSATA 144
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV SI R+ FLE WGL+NY
Sbjct: 145 CRRNLAGDVCSIVRLHSFLEQWGLLNY 171
Score = 158 (60.7 bits), Expect = 9.6e-34, Sum P(3) = 9.6e-34
Identities = 35/110 (31%), Positives = 56/110 (50%)
Query: 215 DWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSEDVD 274
DWTE+ET LLEA+ F DDW KV HV +++ +C+ F++LP ++ + S+ +
Sbjct: 256 DWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLTENLSSDKAE 315
Query: 275 NKFFSINNPSDAVSESENVGATSPSKRMRLTPLADASNPIMAQAAFLSAL 324
P A E A P P + + NP+M+ AFL+++
Sbjct: 316 AA------PGGAAKEVLGPLAFQP------VPFSQSGNPVMSTVAFLASV 353
Score = 104 (41.7 bits), Expect = 9.6e-34, Sum P(3) = 9.6e-34
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 370 ATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQL 429
A + LA A+V A L + EE ++ ++ +VE QMK+++ K+ F+ L+ M++E + L
Sbjct: 449 AAASCLAAAAVKAKHLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKERESL 508
Query: 430 EQVKNLLFVDQLSVLFH 446
E ++ L +++ + FH
Sbjct: 509 EYQRHQLILERQA--FH 523
Score = 37 (18.1 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 447 KSNARKNGDRTEENVKTDV 465
K +A +G+ +E +KT++
Sbjct: 208 KESAGASGEPPKEEIKTEI 226
>WB|WBGene00004203 [details] [associations]
symbol:swsn-1 species:6239 "Caenorhabditis elegans"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IGI;IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IGI;IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IGI;IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0046662 "regulation of oviposition" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0035262 "gonad
morphogenesis" evidence=IMP] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003677
GO:GO:0040018 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 UniGene:Cel.7072 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 RefSeq:NP_001256907.1
ProteinModelPortal:H8ESF3 SMR:H8ESF3 WormBase:Y113G7B.23c
Uniprot:H8ESF3
Length = 792
Score = 221 (82.9 bits), Expect = 9.8e-34, Sum P(3) = 9.8e-34
Identities = 42/87 (48%), Positives = 58/87 (66%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
VPSY+ WF +++I + E + +PEFF+ ++ SK P VY YR+ +V YR NP ++ T
Sbjct: 85 VPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTPDVYVAYRNFMVDTYRLNPFEYVSATA 144
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV SI R+ FLE WGL+NY
Sbjct: 145 CRRNLAGDVCSIVRLHSFLEQWGLLNY 171
Score = 158 (60.7 bits), Expect = 9.8e-34, Sum P(3) = 9.8e-34
Identities = 35/110 (31%), Positives = 56/110 (50%)
Query: 215 DWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSEDVD 274
DWTE+ET LLEA+ F DDW KV HV +++ +C+ F++LP ++ + S+ +
Sbjct: 256 DWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLTENLSSDKAE 315
Query: 275 NKFFSINNPSDAVSESENVGATSPSKRMRLTPLADASNPIMAQAAFLSAL 324
P A E A P P + + NP+M+ AFL+++
Sbjct: 316 AA------PGGAAKEVLGPLAFQP------VPFSQSGNPVMSTVAFLASV 353
Score = 104 (41.7 bits), Expect = 9.8e-34, Sum P(3) = 9.8e-34
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 370 ATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQL 429
A + LA A+V A L + EE ++ ++ +VE QMK+++ K+ F+ L+ M++E + L
Sbjct: 449 AAASCLAAAAVKAKHLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKERESL 508
Query: 430 EQVKNLLFVDQLSVLFH 446
E ++ L +++ + FH
Sbjct: 509 EYQRHQLILERQA--FH 523
Score = 37 (18.1 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 447 KSNARKNGDRTEENVKTDV 465
K +A +G+ +E +KT++
Sbjct: 208 KESAGASGEPPKEEIKTEI 226
>ASPGD|ASPL0000005061 [details] [associations]
symbol:AN6705 species:162425 "Emericella nidulans"
[GO:0016586 "RSC complex" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015616 "DNA translocase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:BN001301 InterPro:IPR017884
PROSITE:PS51293 EMBL:AACD01000112 eggNOG:COG5259 OrthoDB:EOG4PZNGG
KO:K11649 RefSeq:XP_664309.1 ProteinModelPortal:Q5AYC5
STRING:Q5AYC5 EnsemblFungi:CADANIAT00007492 GeneID:2870489
KEGG:ani:AN6705.2 HOGENOM:HOG000180903 OMA:SKTPAVY Uniprot:Q5AYC5
Length = 681
Score = 232 (86.7 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 47/93 (50%), Positives = 57/93 (61%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSYS WF +I E K L EFF+ R+ SK P VY+ YRD ++ YR NP +T T
Sbjct: 107 LPSYSTWFDMHTIHPIEKKALAEFFNGRNRSKTPAVYKDYRDFMINTYRLNPIEYLTVTA 166
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINYFASVKT 134
RR L GDV +I RV FLE WGLINY +T
Sbjct: 167 CRRNLAGDVCAIMRVHSFLEQWGLINYQVDPQT 199
Score = 147 (56.8 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 30/100 (30%), Positives = 58/100 (58%)
Query: 179 KYDLTLCARCYVRGNHRVGVSSSDFRRVEISEEAR-----SDWTEKETLQLLEAIMHFGD 233
KYDL C C+++G ++SDF ++E S +R + W++ E L LLE + +F +
Sbjct: 341 KYDL--CPNCFLQGRMPSSHNASDFVKLEDSSYSRIPDREAPWSDSELLLLLEGLENFDE 398
Query: 234 DWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDSEDV 273
+W ++A HV ++ ++C+ F++L +++ DS +V
Sbjct: 399 NWEQIANHVGTRTREECVMKFLQLEIEDQYL---EDSPEV 435
Score = 94 (38.1 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 374 ALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVK 433
AL A+ A +L EE ++ + +S V V +++ + K+ +F ++ +E E ++LE +
Sbjct: 545 ALGAAAARAGALASHEEREMTRLVSAAVNVTLQKFEIKLQQFNEMEEIIEAERRELELAR 604
Query: 434 NLLFVDQLS 442
LF+D+L+
Sbjct: 605 QQLFLDRLA 613
Score = 45 (20.9 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 271 EDVDNKFFSINNPSDAVSESENVGATSPSKRMRLTPLADASNPIMAQAAFLSAL 324
E+ KF + + +S V A P + P++ NP+++ AFL+ +
Sbjct: 413 EECVMKFLQLEIEDQYLEDSPEVRA-GPGRE----PVSHIENPVLSVVAFLAQM 461
>UNIPROTKB|F1P1A8 [details] [associations]
symbol:F1P1A8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0008286
"insulin receptor signaling pathway" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0071564 "npBAF complex"
evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778
"WINAC complex" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0071564 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337 GO:GO:0001741
GO:GO:0071778 OMA:YKKYVHA GeneTree:ENSGT00390000018166
EMBL:AADN02000062 EMBL:AADN02000057 EMBL:AADN02000058
EMBL:AADN02000059 EMBL:AADN02000060 EMBL:AADN02000061
IPI:IPI00575887 Ensembl:ENSGALT00000008096 Uniprot:F1P1A8
Length = 1035
Score = 223 (83.6 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 41/87 (47%), Positives = 56/87 (64%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++ I E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 386 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 445
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV ++ RV FLE WGLINY
Sbjct: 446 CRRNLTGDVCAVMRVHAFLEQWGLINY 472
Score = 152 (58.6 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDS 270
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ + SD+
Sbjct: 554 AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL-ENSDA 611
Score = 108 (43.1 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 348 ASKGSLMRNTRQQEAGVASNGD---ATQNALARASVDASSLIEKEELDVEKAISGIVEVQ 404
ASK M +++ S G+ A ALA A+ A L EE ++ ++ +VE Q
Sbjct: 779 ASKDKEMEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQ 838
Query: 405 MKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFH 446
MK+++ K+ FE L+ M+ E + LEQ + L ++ + FH
Sbjct: 839 MKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQN--FH 878
Score = 57 (25.1 bits), Expect = 5.6e-28, Sum P(3) = 5.6e-28
Identities = 31/172 (18%), Positives = 65/172 (37%)
Query: 291 ENVGATSPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASK 350
EN A+ + P + + NP+M+ AFL+++ S V +
Sbjct: 607 ENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPL 666
Query: 351 GSLMRNTRQ-QEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQ 409
+ + ++ QEA AS L + + + E E++D + E ++ +
Sbjct: 667 ELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKMDGAEEEKMETETDGQQPE 726
Query: 410 DKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFHKSNARKNGDRTEENV 461
+ ES +++ E+ ++ E +N + K + +ENV
Sbjct: 727 KVESKAES-EIEEGEKVQEGENERNPEKEQESEATADTKPEEKEAEENKENV 777
>UNIPROTKB|G4MV88 [details] [associations]
symbol:MGG_01720 "Transcription regulatory protein SWI3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:CM001232 KO:K11649 RefSeq:XP_003714717.1
ProteinModelPortal:G4MV88 EnsemblFungi:MGG_01720T0 GeneID:2679776
KEGG:mgr:MGG_01720 Uniprot:G4MV88
Length = 704
Score = 244 (91.0 bits), Expect = 3.2e-33, Sum P(2) = 3.2e-33
Identities = 47/87 (54%), Positives = 60/87 (68%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++I+ E K LPEFF+SR+ SK P VY+ YRD ++ YR NP+ +T T
Sbjct: 139 LPSYTVWFDMNAINNIEKKALPEFFNSRNRSKTPAVYKDYRDFMINTYRLNPAEYLTVTA 198
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV +I RV FLE WGLINY
Sbjct: 199 CRRNLAGDVCAIMRVHAFLEQWGLINY 225
Score = 189 (71.6 bits), Expect = 3.2e-33, Sum P(2) = 3.2e-33
Identities = 60/274 (21%), Positives = 120/274 (43%)
Query: 184 LCARCYVRGNHRVGVSSSDFRRVEISE-----EARSDWTEKETLQLLEAIMHFGDDWRKV 238
LC CY + + ++E + + + WT++ET++LLEA+ + +DW ++
Sbjct: 373 LCPGCYASSRMDAKEDNMGYEKMENPQYPATVDREAPWTDEETVRLLEALQKYDEDWGEI 432
Query: 239 AQHVSGKSEKDCITHFIKLPFGQEFICKESDSEDVDNKFFSINNPSDAVSESENVGATSP 298
A HV ++ ++C HF++L +++ E +V F +I N D + +
Sbjct: 433 ANHVGTRTREECALHFLQLDIEDKYLDTEPLQANVPTGFPTIGN--DKLLPFSHADNPIL 490
Query: 299 SKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASKGSLMRNTR 358
S L LAD ++ +A AA S ++ ++ + G M
Sbjct: 491 SVVAFLATLADPTS--VASAAGRSYEDLTKALRKQLELGDSSQTNGKGKEKDGDSMDVDI 548
Query: 359 QQEAGVASNGDATQNA----------LARASVDASSLIEKEELDVEKAISGIVEVQMKEI 408
QQE + T LA + A L EE ++ + +S V V ++++
Sbjct: 549 QQETTTTTTTTTTTTKTSIQGLAGIPLAATASRAGGLASHEEREMTRLVSAAVNVTLQKV 608
Query: 409 QDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLS 442
K+ F ++ ++ E ++LE+ + L++D+L+
Sbjct: 609 DMKLKFFNDMESVLQAERRELERARQQLYLDRLA 642
>UNIPROTKB|G3N0H4 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:DAAA02054442 Ensembl:ENSBTAT00000065210 Uniprot:G3N0H4
Length = 925
Score = 222 (83.2 bits), Expect = 5.0e-33, Sum P(3) = 5.0e-33
Identities = 40/87 (45%), Positives = 56/87 (64%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++ I E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 387 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 446
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV ++ RV FLE WGL+NY
Sbjct: 447 CRRNLTGDVCAVMRVHAFLEQWGLVNY 473
Score = 152 (58.6 bits), Expect = 5.0e-33, Sum P(3) = 5.0e-33
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDS 270
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ + SD+
Sbjct: 556 AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL-ENSDA 613
Score = 105 (42.0 bits), Expect = 5.0e-33, Sum P(3) = 5.0e-33
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 361 EAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDL 420
E VA+ A ALA A+ A L EE ++ ++ +VE QMK+++ K+ FE L+
Sbjct: 819 EGNVAT---AAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET 875
Query: 421 QMEEEWKQLEQVKNLLFVDQLSVLFH 446
M+ E + LEQ + L ++ + FH
Sbjct: 876 IMDREKEALEQQRQQLLTERQN--FH 899
Score = 57 (25.1 bits), Expect = 4.7e-28, Sum P(3) = 4.7e-28
Identities = 22/103 (21%), Positives = 40/103 (38%)
Query: 291 ENVGATSPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASK 350
EN A+ + P + + NP+M+ AFL+++ S V +
Sbjct: 609 ENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPL 668
Query: 351 GSLMRNTRQ-QEAGVASNGDATQNALARASVDASSLIEKEELD 392
+ + ++ QEA AS L + + + E E+LD
Sbjct: 669 ELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLD 711
Score = 45 (20.9 bits), Expect = 8.2e-27, Sum P(3) = 8.2e-27
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 342 SDVDDRASKGSLMRNTRQQEAGVASNGDATQNALARASVDASSLIEKEELDVEK 395
+D D+A G +N+ +++ S ++ A + + + ++ E DV K
Sbjct: 757 TDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKEAEENKELTDSCKERESDVGK 810
Score = 44 (20.5 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 341 LSDVDDRAS--KGSLMRNTRQQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAIS 398
L DV + S +G + +T + +A A++ L + A + E E + +KA
Sbjct: 710 LDDVGTKRSHGEGEVTDDTPDCKRSLA----ASKGGLMHIQLKAENKGENETDEGDKAQD 765
Query: 399 GIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNL 435
G E ++ QD + S D + EE K+ E+ K L
Sbjct: 766 GENEKNSEKEQDSEV---SEDTKSEE--KEAEENKEL 797
Score = 40 (19.1 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 11/38 (28%), Positives = 25/38 (65%)
Query: 373 NALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
+A A+A+++ S + +EE+ +E +VE +K++Q+
Sbjct: 649 SAAAKAALEEFSRV-REEVPLE-----LVEAHVKKVQE 680
>UNIPROTKB|F1MYU1 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008286
"insulin receptor signaling pathway" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006337 "nucleosome
disassembly" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001741 "XY body" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0009887 GO:GO:0071564 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0001741 GO:GO:0071778 OMA:YKKYVHA
GeneTree:ENSGT00390000018166 EMBL:DAAA02054442 IPI:IPI01002084
Ensembl:ENSBTAT00000044741 Uniprot:F1MYU1
Length = 952
Score = 222 (83.2 bits), Expect = 5.7e-33, Sum P(3) = 5.7e-33
Identities = 40/87 (45%), Positives = 56/87 (64%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++ I E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 387 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 446
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV ++ RV FLE WGL+NY
Sbjct: 447 CRRNLTGDVCAVMRVHAFLEQWGLVNY 473
Score = 152 (58.6 bits), Expect = 5.7e-33, Sum P(3) = 5.7e-33
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDS 270
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ + SD+
Sbjct: 555 AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL-ENSDA 612
Score = 105 (42.0 bits), Expect = 5.7e-33, Sum P(3) = 5.7e-33
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 361 EAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDL 420
E VA+ A ALA A+ A L EE ++ ++ +VE QMK+++ K+ FE L+
Sbjct: 799 EGNVAT---AAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET 855
Query: 421 QMEEEWKQLEQVKNLLFVDQLSVLFH 446
M+ E + LEQ + L ++ + FH
Sbjct: 856 IMDREKEALEQQRQQLLTERQN--FH 879
Score = 53 (23.7 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 21/103 (20%), Positives = 40/103 (38%)
Query: 291 ENVGATSPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASK 350
EN A+ + P + + NP+M+ AFL+++ S V +
Sbjct: 608 ENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPL 667
Query: 351 GSLMRNTRQ-QEAGVASNGDATQNALARASVDASSLIEKEELD 392
+ + ++ QEA AS L + + + E E+L+
Sbjct: 668 ELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLE 710
Score = 45 (20.9 bits), Expect = 9.3e-27, Sum P(3) = 9.3e-27
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 342 SDVDDRASKGSLMRNTRQQEAGVASNGDATQNALARASVDASSLIEKEELDVEK 395
+D D+A G +N+ +++ S ++ A + + + ++ E DV K
Sbjct: 737 TDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKEAEENKELTDSCKERESDVGK 790
Score = 40 (19.1 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 11/38 (28%), Positives = 25/38 (65%)
Query: 373 NALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
+A A+A+++ S + +EE+ +E +VE +K++Q+
Sbjct: 648 SAAAKAALEEFSRV-REEVPLE-----LVEAHVKKVQE 679
>TAIR|locus:2036942 [details] [associations]
symbol:SWI3C "SWITCH/sucrose nonfermenting 3C"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA]
[GO:0045132 "meiotic chromosome segregation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
HSSP:P32591 eggNOG:COG5259 EMBL:AC007727 KO:K11649 EMBL:AY091026
EMBL:AY117245 IPI:IPI00532467 PIR:D86350 RefSeq:NP_173589.1
UniGene:At.41645 ProteinModelPortal:Q9XI07 SMR:Q9XI07 IntAct:Q9XI07
STRING:Q9XI07 PaxDb:Q9XI07 PRIDE:Q9XI07 EnsemblPlants:AT1G21700.1
GeneID:838774 KEGG:ath:AT1G21700 TAIR:At1g21700
HOGENOM:HOG000243996 InParanoid:Q9XI07 OMA:VAASCAH PhylomeDB:Q9XI07
ProtClustDB:CLSN2679743 Genevestigator:Q9XI07 Uniprot:Q9XI07
Length = 807
Score = 236 (88.1 bits), Expect = 7.0e-33, Sum P(2) = 7.0e-33
Identities = 80/313 (25%), Positives = 140/313 (44%)
Query: 163 CNGC-KTLCTIACFACDKYDLTLCARCYVRGNHRVGVSSSDFRRVE----ISEEARSDWT 217
CN C + L T+ + K D+ LC C+ G VG S DF RV+ ++ +WT
Sbjct: 345 CNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWT 404
Query: 218 EKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFI--CKESDSEDVDN 275
++ETL LLEA+ + ++W ++A HV KS+ CI HF++LP + + S + +N
Sbjct: 405 DQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTEN 464
Query: 276 KFFSINNP-SDAVSESENVGATSPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXX 334
++ +D+ + ++L P + NP+MA AFL++
Sbjct: 465 PTNGYDHKGTDSNGDLPGYSEQGSDTEIKL-PFVKSPNPVMALVAFLASAVGPRVAASCA 523
Query: 335 XXXXTTLSDVDDRASKG------SLMRNTRQQEAGV----ASNGDATQNALARASVDASS 384
+ LS+ D S+G SL+ QQ+ G + NG Q L + V A+
Sbjct: 524 HESLSVLSEDDRMKSEGMQGKEASLLDGENQQQDGAHKTSSQNGAEAQTPLPQDKVMAAF 583
Query: 385 LIEKEELDVE-KAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSV 443
+ K + E +++ + I+ + +ME + KQ +++ LL + V
Sbjct: 584 RAGLSAAATKAKLFADHEEREIQRLSANIVNHQLK--RMELKLKQFAEIETLLMKECEQV 641
Query: 444 LFHKSNARKNGDR 456
K+ R + +R
Sbjct: 642 --EKTRQRFSAER 652
Score = 197 (74.4 bits), Expect = 7.0e-33, Sum P(2) = 7.0e-33
Identities = 37/99 (37%), Positives = 63/99 (63%)
Query: 38 DVVNV-PSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRK 96
D+V+V P +S WF+ +++ E + +P+FF +SP+ P Y +R++IV Y ENP +
Sbjct: 173 DLVHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKT 232
Query: 97 ITFTDVRRTLVG-DVGSIRRVFDFLETWGLINYFASVKT 134
+T +D + + G D+ RVF FL+ WG+INY A+ ++
Sbjct: 233 LTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQS 271
Score = 74 (31.1 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 16/75 (21%), Positives = 41/75 (54%)
Query: 370 ATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQL 429
A + L+ A+ A + EE ++++ + IV Q+K ++ K+ +F ++ + +E +Q+
Sbjct: 582 AFRAGLSAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQV 641
Query: 430 EQVKNLLFVDQLSVL 444
E+ + ++ +L
Sbjct: 642 EKTRQRFSAERARML 656
>FB|FBgn0002783 [details] [associations]
symbol:mor "moira" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=NAS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS;IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0035060
"brahma complex" evidence=IDA;NAS;TAS] [GO:0003713 "transcription
coactivator activity" evidence=IC] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IGI] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0007480 "imaginal disc-derived leg
morphogenesis" evidence=IGI] [GO:0008587 "imaginal disc-derived
wing margin morphogenesis" evidence=IMP] [GO:0008586 "imaginal
disc-derived wing vein morphogenesis" evidence=IMP] [GO:0007474
"imaginal disc-derived wing vein specification" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 InterPro:IPR001357 EMBL:AE014297
GO:GO:0045893 GO:GO:0022008 GO:GO:0003677 GO:GO:0008586
GO:GO:0007474 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0007480 SUPFAM:SSF52113 GO:GO:0045749
GO:GO:0043044 GO:GO:0008587 GO:GO:0035060 KO:K11649
GeneTree:ENSGT00390000018166 OMA:QYIQAEP FlyBase:FBgn0002783
EMBL:AF071502 EMBL:BT031130 PIR:T13153 RefSeq:NP_524373.1
UniGene:Dm.2417 SMR:Q9VF03 DIP:DIP-38882N IntAct:Q9VF03
MINT:MINT-6541278 STRING:Q9VF03 EnsemblMetazoa:FBtr0083238
GeneID:41942 KEGG:dme:Dmel_CG18740 UCSC:CG18740-RA CTD:41942
InParanoid:Q9VF03 GenomeRNAi:41942 NextBio:826387 Uniprot:Q9VF03
Length = 1209
Score = 238 (88.8 bits), Expect = 7.0e-33, Sum P(3) = 7.0e-33
Identities = 45/87 (51%), Positives = 59/87 (67%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
VPSYS WF ++SI E + +PEFF+S++ SK P +Y YR+ ++ YR NP+ +T T
Sbjct: 452 VPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTA 511
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV +I RV FLE WGLINY
Sbjct: 512 CRRNLAGDVCAIMRVHAFLEQWGLINY 538
Score = 136 (52.9 bits), Expect = 7.0e-33, Sum P(3) = 7.0e-33
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 215 DWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFI 264
+WT++ETL LLE + DDW KV +HV +++ +CI HF++LP ++
Sbjct: 654 EWTDQETLLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYL 703
Score = 105 (42.0 bits), Expect = 7.0e-33, Sum P(3) = 7.0e-33
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 370 ATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQL 429
A ALA A+V A L EE ++ ++ +VE QMK+++ K+ FE L+ ME E + L
Sbjct: 949 AAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGL 1008
Query: 430 EQVKNLLFVDQLSVLFH 446
E + L ++ FH
Sbjct: 1009 EYQRQQLITERQQ--FH 1023
Score = 60 (26.2 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 22/110 (20%), Positives = 45/110 (40%)
Query: 306 PLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASKGSLMRNTRQQEAGVA 365
P + + NPIM+ AFL+++ + + D ++M N + +
Sbjct: 719 PFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVP-ATIMDNHLKNVEKAS 777
Query: 366 SNGDATQN-ALARASVDASSLIEKEELDVE---KAISGIVEVQMKEIQDK 411
+ G N LA + + + + +E E A +G + +MK++ K
Sbjct: 778 AGGKFNPNFGLANSGIAGTGNDKDDEEGKEGGASASAGGSDEEMKDLSKK 827
>POMBASE|SPAC17G6.10 [details] [associations]
symbol:ssr1 "SWI/SNF and RSC complex subunit Ssr1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=IDA] [GO:0016586 "RSC complex" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=NAS] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 PomBase:SPAC17G6.10 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000122
GO:GO:0000790 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0016586 HSSP:P32591 eggNOG:COG5259 OrthoDB:EOG4PZNGG
KO:K11649 PIR:T37842 RefSeq:NP_594257.1 ProteinModelPortal:O13788
DIP:DIP-48380N STRING:O13788 EnsemblFungi:SPAC17G6.10.1
GeneID:2542400 KEGG:spo:SPAC17G6.10 OMA:LCARCYV NextBio:20803459
Uniprot:O13788
Length = 527
Score = 234 (87.4 bits), Expect = 8.8e-33, Sum P(3) = 8.8e-33
Identities = 44/89 (49%), Positives = 57/89 (64%)
Query: 40 VNVPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITF 99
V VP +++WF F + E E K PEFFD ++ SK P VY+ YRD ++ +R N +TF
Sbjct: 52 VEVPEWAQWFDFSKVHEIEKKQNPEFFDGKNTSKTPEVYKEYRDFMISTFRLNSKVYLTF 111
Query: 100 TDVRRTLVGDVGSIRRVFDFLETWGLINY 128
T RR L GDV ++ RV FLE WGLINY
Sbjct: 112 TACRRNLAGDVCAVLRVHRFLEQWGLINY 140
Score = 147 (56.8 bits), Expect = 8.8e-33, Sum P(3) = 8.8e-33
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 179 KYDLTLCARCYVRGNHRVGVSSSDFRRVEISEEARSD--WTEKETLQLLEAIMHFGDDWR 236
KY++ C CY + + +D++ V I + D WT +E + L E + + DDW
Sbjct: 256 KYNV--CISCYQQNRFPSPTTIADYKEVAIQNKIEDDDTWTAQELVLLSEGVEMYSDDWA 313
Query: 237 KVAQHVSGKSEKDCITHFIKLPFGQEFICK 266
KVA HV+ KS ++CI F+ LP + + K
Sbjct: 314 KVASHVNTKSVEECILKFLNLPSSDKALFK 343
Score = 80 (33.2 bits), Expect = 8.8e-33, Sum P(3) = 8.8e-33
Identities = 30/155 (19%), Positives = 65/155 (41%)
Query: 301 RMRLTPLADA---SNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASKGSLMRNT 357
++ P+ D+ NPI++ +FL+ + + D+ S+
Sbjct: 346 KVHTNPVVDSLQGKNPILSVVSFLAKMVPPSSFTQKSSAK----EEESDKVKGESVYPKP 401
Query: 358 RQQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFES 417
+ V NG + +++ + + + + EE + I V VQ+K I+ K+ F+
Sbjct: 402 ESESYDVEMNGKSLEDSDSLSEL----YLTNEEKKMASIIKDSVNVQIKLIESKLSHFDY 457
Query: 418 LDLQMEEEWKQLEQVKNLLFVDQLSVLFHKSNARK 452
LD + + ++L+ + ++L + NARK
Sbjct: 458 LDQHIRLKSQELDAFAQATYREKLYMKRECQNARK 492
>RGD|1304850 [details] [associations]
symbol:Smarcc1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 1"
species:10116 "Rattus norvegicus" [GO:0001741 "XY body"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006337
"nucleosome disassembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0008286 "insulin receptor signaling
pathway" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO] [GO:0071565 "nBAF complex" evidence=ISO] [GO:0071778
"WINAC complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 RGD:1304850
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 IPI:IPI00764046
Ensembl:ENSRNOT00000028250 ArrayExpress:D4A4J7 Uniprot:D4A4J7
Length = 1086
Score = 222 (83.2 bits), Expect = 9.8e-33, Sum P(3) = 9.8e-33
Identities = 40/87 (45%), Positives = 56/87 (64%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++ I E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 450 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 509
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV ++ RV FLE WGL+NY
Sbjct: 510 CRRNLTGDVCAVMRVHAFLEQWGLVNY 536
Score = 152 (58.6 bits), Expect = 9.8e-33, Sum P(3) = 9.8e-33
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDS 270
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ + SD+
Sbjct: 618 AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL-ENSDA 675
Score = 105 (42.0 bits), Expect = 9.8e-33, Sum P(3) = 9.8e-33
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 361 EAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDL 420
E VA+ A ALA A+ A L EE ++ ++ +VE QMK+++ K+ FE L+
Sbjct: 862 EGNVAT---AAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET 918
Query: 421 QMEEEWKQLEQVKNLLFVDQLSVLFH 446
M+ E + LEQ + L ++ + FH
Sbjct: 919 IMDREKEALEQQRQQLLTERQN--FH 942
Score = 53 (23.7 bits), Expect = 2.4e-27, Sum P(3) = 2.4e-27
Identities = 21/103 (20%), Positives = 40/103 (38%)
Query: 291 ENVGATSPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASK 350
EN A+ + P + + NP+M+ AFL+++ S V +
Sbjct: 671 ENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPL 730
Query: 351 GSLMRNTRQ-QEAGVASNGDATQNALARASVDASSLIEKEELD 392
+ + ++ QEA AS L + + + E E+L+
Sbjct: 731 ELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLE 773
Score = 40 (19.1 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 11/38 (28%), Positives = 25/38 (65%)
Query: 373 NALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
+A A+A+++ S + +EE+ +E +VE +K++Q+
Sbjct: 711 SAAAKAALEEFSRV-REEVPLE-----LVEAHVKKVQE 742
>MGI|MGI:1203524 [details] [associations]
symbol:Smarcc1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 1"
species:10090 "Mus musculus" [GO:0001741 "XY body" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006323 "DNA packaging" evidence=TAS] [GO:0006337
"nucleosome disassembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
MGI:MGI:1203524 GO:GO:0008286 GO:GO:0007399 GO:GO:0003677
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0009887 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0006323 GO:GO:0001741 GO:GO:0071778 eggNOG:COG5259 CTD:6599
HOGENOM:HOG000047736 HOVERGEN:HBG054849 KO:K11649 OMA:YKKYVHA
EMBL:U85614 EMBL:BC052423 EMBL:BC053064 IPI:IPI00125662
IPI:IPI00515361 PIR:T30967 RefSeq:NP_033237.2 UniGene:Mm.85410
ProteinModelPortal:P97496 SMR:P97496 DIP:DIP-39986N IntAct:P97496
MINT:MINT-4084777 STRING:P97496 PhosphoSite:P97496 PaxDb:P97496
PRIDE:P97496 Ensembl:ENSMUST00000088716 Ensembl:ENSMUST00000111969
GeneID:20588 KEGG:mmu:20588 UCSC:uc009rto.1 UCSC:uc009rtp.1
GeneTree:ENSGT00390000018166 InParanoid:P97496 OrthoDB:EOG4JHCF5
NextBio:298891 Bgee:P97496 Genevestigator:P97496
GermOnline:ENSMUSG00000032481 Uniprot:P97496
Length = 1104
Score = 222 (83.2 bits), Expect = 1.0e-32, Sum P(3) = 1.0e-32
Identities = 40/87 (45%), Positives = 56/87 (64%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++ I E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 450 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 509
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV ++ RV FLE WGL+NY
Sbjct: 510 CRRNLTGDVCAVMRVHAFLEQWGLVNY 536
Score = 152 (58.6 bits), Expect = 1.0e-32, Sum P(3) = 1.0e-32
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDS 270
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ + SD+
Sbjct: 618 AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL-ENSDA 675
Score = 105 (42.0 bits), Expect = 1.0e-32, Sum P(3) = 1.0e-32
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 361 EAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDL 420
E VA+ A ALA A+ A L EE ++ ++ +VE QMK+++ K+ FE L+
Sbjct: 862 EGNVAT---AAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET 918
Query: 421 QMEEEWKQLEQVKNLLFVDQLSVLFH 446
M+ E + LEQ + L ++ + FH
Sbjct: 919 IMDREKEALEQQRQQLLTERQN--FH 942
Score = 53 (23.7 bits), Expect = 2.5e-27, Sum P(3) = 2.5e-27
Identities = 21/103 (20%), Positives = 40/103 (38%)
Query: 291 ENVGATSPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASK 350
EN A+ + P + + NP+M+ AFL+++ S V +
Sbjct: 671 ENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPL 730
Query: 351 GSLMRNTRQ-QEAGVASNGDATQNALARASVDASSLIEKEELD 392
+ + ++ QEA AS L + + + E E+L+
Sbjct: 731 ELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLE 773
Score = 40 (19.1 bits), Expect = 5.6e-26, Sum P(3) = 5.6e-26
Identities = 11/38 (28%), Positives = 25/38 (65%)
Query: 373 NALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
+A A+A+++ S + +EE+ +E +VE +K++Q+
Sbjct: 711 SAAAKAALEEFSRV-REEVPLE-----LVEAHVKKVQE 742
>UNIPROTKB|Q92922 [details] [associations]
symbol:SMARCC1 "SWI/SNF complex subunit SMARCC1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0047485 "protein N-terminus binding"
evidence=IPI] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0071564 "npBAF complex" evidence=ISS] [GO:0071565 "nBAF
complex" evidence=ISS] [GO:0071778 "WINAC complex" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=NAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0006337 "nucleosome disassembly"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0045893 GO:GO:0007399 GO:GO:0003677
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0009887 GO:GO:0003713 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 InterPro:IPR017884 PROSITE:PS51293
Pathway_Interaction_DB:ar_tf_pathway SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0001741 GO:GO:0071778 eggNOG:COG5259 EMBL:U66615
EMBL:BC039843 EMBL:BC065253 EMBL:BC113465 EMBL:BC117213
IPI:IPI00234252 RefSeq:NP_003065.3 UniGene:Hs.476179 PDB:2YUS
PDBsum:2YUS ProteinModelPortal:Q92922 SMR:Q92922 DIP:DIP-27545N
DIP:DIP-33044N IntAct:Q92922 MINT:MINT-1137868 STRING:Q92922
PhosphoSite:Q92922 DMDM:209572723 PaxDb:Q92922 PRIDE:Q92922
DNASU:6599 Ensembl:ENST00000254480 GeneID:6599 KEGG:hsa:6599
UCSC:uc003crq.2 CTD:6599 GeneCards:GC03M047626 H-InvDB:HIX0030795
HGNC:HGNC:11104 HPA:CAB011576 HPA:CAB016336 HPA:HPA024352
HPA:HPA026853 MIM:601732 neXtProt:NX_Q92922 PharmGKB:PA35954
HOGENOM:HOG000047736 HOVERGEN:HBG054849 InParanoid:Q92922 KO:K11649
OMA:YKKYVHA OrthoDB:EOG4V9TSW PhylomeDB:Q92922 ChiTaRS:SMARCC1
EvolutionaryTrace:Q92922 GenomeRNAi:6599 NextBio:25671
ArrayExpress:Q92922 Bgee:Q92922 CleanEx:HS_SMARCC1
Genevestigator:Q92922 GermOnline:ENSG00000173473 Uniprot:Q92922
Length = 1105
Score = 222 (83.2 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 40/87 (45%), Positives = 56/87 (64%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++ I E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 451 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 510
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV ++ RV FLE WGL+NY
Sbjct: 511 CRRNLTGDVCAVMRVHAFLEQWGLVNY 537
Score = 152 (58.6 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDS 270
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ + SD+
Sbjct: 619 AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL-ENSDA 676
Score = 105 (42.0 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 361 EAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDL 420
E VA+ A ALA A+ A L EE ++ ++ +VE QMK+++ K+ FE L+
Sbjct: 863 EGNVAT---AAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET 919
Query: 421 QMEEEWKQLEQVKNLLFVDQLSVLFH 446
M+ E + LEQ + L ++ + FH
Sbjct: 920 IMDREKEALEQQRQQLLTERQN--FH 943
Score = 53 (23.7 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 21/103 (20%), Positives = 40/103 (38%)
Query: 291 ENVGATSPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASK 350
EN A+ + P + + NP+M+ AFL+++ S V +
Sbjct: 672 ENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPL 731
Query: 351 GSLMRNTRQ-QEAGVASNGDATQNALARASVDASSLIEKEELD 392
+ + ++ QEA AS L + + + E E+L+
Sbjct: 732 ELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLE 774
Score = 41 (19.5 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 382 ASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNL 435
A + +E E + +KA G E ++ QD + S D + EE K+ E+ K L
Sbjct: 793 AENKVENETDEGDKAQDGENEKNSEKEQDSEV---SEDTKSEE--KETEENKEL 841
Score = 40 (19.1 bits), Expect = 5.6e-26, Sum P(3) = 5.6e-26
Identities = 11/38 (28%), Positives = 25/38 (65%)
Query: 373 NALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
+A A+A+++ S + +EE+ +E +VE +K++Q+
Sbjct: 712 SAAAKAALEEFSRV-REEVPLE-----LVEAHVKKVQE 743
Score = 38 (18.4 bits), Expect = 9.1e-26, Sum P(3) = 9.1e-26
Identities = 9/54 (16%), Positives = 23/54 (42%)
Query: 342 SDVDDRASKGSLMRNTRQQEAGVASNGDATQNALARASVDASSLIEKEELDVEK 395
+D D+A G +N+ +++ S ++ + + + ++ E D K
Sbjct: 801 TDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKELTDTCKERESDTGK 854
>UNIPROTKB|E2REF0 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0008286
GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0009887 GO:GO:0071564 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337 GO:GO:0001741
GO:GO:0071778 CTD:6599 KO:K11649 OMA:YKKYVHA
GeneTree:ENSGT00390000018166 EMBL:AAEX03012237 EMBL:AAEX03012238
RefSeq:XP_533845.2 ProteinModelPortal:E2REF0
Ensembl:ENSCAFT00000020868 GeneID:476640 KEGG:cfa:476640
NextBio:20852260 Uniprot:E2REF0
Length = 1107
Score = 222 (83.2 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 40/87 (45%), Positives = 56/87 (64%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++ I E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 451 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 510
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV ++ RV FLE WGL+NY
Sbjct: 511 CRRNLTGDVCAVMRVHAFLEQWGLVNY 537
Score = 152 (58.6 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 212 ARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDS 270
A +WTE+ETL LLEA+ + DDW KV++HV +++ +CI HF++LP ++ + SD+
Sbjct: 619 AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL-ENSDA 676
Score = 105 (42.0 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 361 EAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDL 420
E VA+ A ALA A+ A L EE ++ ++ +VE QMK+++ K+ FE L+
Sbjct: 863 EGNVAT---AAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET 919
Query: 421 QMEEEWKQLEQVKNLLFVDQLSVLFH 446
M+ E + LEQ + L ++ + FH
Sbjct: 920 IMDREKEALEQQRQQLLTERQN--FH 943
Score = 53 (23.7 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 21/103 (20%), Positives = 40/103 (38%)
Query: 291 ENVGATSPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASK 350
EN A+ + P + + NP+M+ AFL+++ S V +
Sbjct: 672 ENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPL 731
Query: 351 GSLMRNTRQ-QEAGVASNGDATQNALARASVDASSLIEKEELD 392
+ + ++ QEA AS L + + + E E+L+
Sbjct: 732 ELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLE 774
Score = 40 (19.1 bits), Expect = 5.7e-26, Sum P(3) = 5.7e-26
Identities = 11/38 (28%), Positives = 25/38 (65%)
Query: 373 NALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQD 410
+A A+A+++ S + +EE+ +E +VE +K++Q+
Sbjct: 712 SAAAKAALEEFSRV-REEVPLE-----LVEAHVKKVQE 743
Score = 39 (18.8 bits), Expect = 7.2e-26, Sum P(3) = 7.2e-26
Identities = 9/54 (16%), Positives = 24/54 (44%)
Query: 342 SDVDDRASKGSLMRNTRQQEAGVASNGDATQNALARASVDASSLIEKEELDVEK 395
+D D+A G +N+ +++ S ++ + + + ++ E D+ K
Sbjct: 801 TDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKELTDTCKERESDLGK 854
>POMBASE|SPAC23H3.10 [details] [associations]
symbol:ssr2 "SWI/SNF and RSC complex subunit Ssr2"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=NAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IC] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IDA]
[GO:0016586 "RSC complex" evidence=IDA] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS01357 PROSITE:PS50135
PROSITE:PS50934 SMART:SM00291 SMART:SM00717 PomBase:SPAC23H3.10
GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000790 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016586 eggNOG:COG5259
OrthoDB:EOG4PZNGG KO:K11649 EMBL:D89227 PIR:T38303 PIR:T43061
RefSeq:NP_593800.1 ProteinModelPortal:O14470 SMR:O14470
DIP:DIP-48383N STRING:O14470 EnsemblFungi:SPAC23H3.10.1
GeneID:2541851 KEGG:spo:SPAC23H3.10 OMA:TEYLTIT NextBio:20802939
Uniprot:O14470
Length = 503
Score = 230 (86.0 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 44/87 (50%), Positives = 56/87 (64%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
VPSY+ WF I + E + PEFF+ +SP K P +Y+ YRD ++ YR P+ +T T
Sbjct: 20 VPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVTA 79
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR LVGDV +I RV FLE WGLINY
Sbjct: 80 CRRNLVGDVCAIIRVHAFLEQWGLINY 106
Score = 178 (67.7 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 34/104 (32%), Positives = 58/104 (55%)
Query: 161 RLCNGCKTLCTIACF---ACDKYDLTLCARCYVRGNHRVGVSSSDFR---RVEISEEARS 214
++C C C+ + KYD+ C CY +G +SSDF ++ + +
Sbjct: 191 KVCFTCGVNCSQTWYHNLKNKKYDI--CPNCYKQGRFSSSFNSSDFLCMDAIDFNHDEEK 248
Query: 215 DWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIKLP 258
W+ +ETL LLEAI +GDDW ++A HV ++++ C+ HF+++P
Sbjct: 249 PWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIP 292
>CGD|CAL0002007 [details] [associations]
symbol:orf19.4488 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0044109 "cellular alcohol
catabolic process" evidence=IEA] [GO:0031496 "positive regulation
of mating type switching" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0005987 "sucrose catabolic
process" evidence=IEA] [GO:0000436 "carbon catabolite activation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
CGD:CAL0002007 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 EMBL:AACQ01000141 KO:K11772
RefSeq:XP_712915.1 ProteinModelPortal:Q59TH7 SMR:Q59TH7
STRING:Q59TH7 GeneID:3645438 KEGG:cal:CaO19.4488 Uniprot:Q59TH7
Length = 971
Score = 247 (92.0 bits), Expect = 7.8e-29, Sum P(2) = 7.8e-29
Identities = 45/90 (50%), Positives = 62/90 (68%)
Query: 39 VVNVPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKIT 98
++ +PSY+ WF+ I + E + LPEFFDS PSK+P++Y YR+ ++ YR NP+ +T
Sbjct: 419 LIVIPSYASWFNMKKIHKIEKESLPEFFDSIHPSKSPKLYVNYRNFMINSYRLNPNEFLT 478
Query: 99 FTDVRRTLVGDVGSIRRVFDFLETWGLINY 128
T RR LVGDVG++ RV FL WGLINY
Sbjct: 479 LTSCRRNLVGDVGTLMRVHRFLNKWGLINY 508
Score = 148 (57.2 bits), Expect = 7.8e-29, Sum P(2) = 7.8e-29
Identities = 55/235 (23%), Positives = 103/235 (43%)
Query: 216 WTEKETLQLLEAIMHFGDDWRKVAQHVSG-KSEKDCITHFIKLPFGQEFICKESDSEDVD 274
WT+ E L+ A+ F +DW K+A V G K+ + CI F+KLP ED
Sbjct: 633 WTKTEKDALISAVKTFKNDWYKIAHQVGGNKTPEQCILEFLKLPL-----------ED-- 679
Query: 275 NKFFSINNPSDAVSESENVGATSPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXX 334
KF IN+ + N+ + P++ NP++A F++ L
Sbjct: 680 -KFNPINDEDET-----NIKLLKYASNY---PISSIDNPVLANLTFMTKLVDSNVAKAAS 730
Query: 335 XXXXTTLSD-VDDRASKG-SLMRNTRQQEAGVASNGDATQNALARA-SV--DASSLIEK- 388
+ + ++++ + + NT G + ++A+A + S L
Sbjct: 731 EAAKKAMDESIENKVQEVYNGNNNTNGGNGGNVERQSSGKDAIATTFGIIGGRSHLFSNY 790
Query: 389 EELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSV 443
EE ++ K S IV ++ +I+ K+ + E L+ E E + + + + LF+D++S+
Sbjct: 791 EEREMHKIGSSIVNHEISKIETKLDKVEELEKIYERERQNMLKQQEELFIDRISL 845
>SGD|S000001933 [details] [associations]
symbol:RSC8 "Component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016586 "RSC
complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP;IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 Pfam:PF04433
PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 SGD:S000001933 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0000082 GO:GO:0008270 EMBL:D50617 EMBL:BK006940
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0006368 GO:GO:0006337 GO:GO:0016586
GO:GO:0043044 GO:GO:0006303 eggNOG:COG5259 EMBL:AY692841 PIR:S56292
RefSeq:NP_116695.3 RefSeq:NP_116697.3 ProteinModelPortal:P43609
SMR:P43609 DIP:DIP-1478N IntAct:P43609 MINT:MINT-401637
STRING:P43609 PaxDb:P43609 PeptideAtlas:P43609 EnsemblFungi:YFR037C
GeneID:850598 GeneID:850600 KEGG:sce:YFR037C KEGG:sce:YFR039C
CYGD:YFR037c HOGENOM:HOG000246692 KO:K11762 OMA:PYEYLTI
OrthoDB:EOG4PZNGG NextBio:966460 Genevestigator:P43609
GermOnline:YFR037C Uniprot:P43609
Length = 557
Score = 195 (73.7 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 39/95 (41%), Positives = 55/95 (57%)
Query: 40 VNVPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITF 99
V +PS++ WF I E E + P+FF+ S K P+ Y+ R+ I+ YR +P +T
Sbjct: 80 VIIPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTI 139
Query: 100 TDVRRTLVGDVGSIRRVFDFLETWGLINYFASVKT 134
T VRR + DV SI ++ FLE WGLINY +T
Sbjct: 140 TAVRRNVAMDVASIVKIHAFLEKWGLINYQIDPRT 174
Score = 174 (66.3 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 34/86 (39%), Positives = 49/86 (56%)
Query: 181 DLTLCARCYVRGNHRVGVSSSDFRRVEIS-EEARSDWTEKETLQLLEAIMHFGDDWRKVA 239
D LC+RC+ G+ SSDF R+E + + +W+++E L LLE I + D W K+A
Sbjct: 279 DTNLCSRCFQEGHFGANFQSSDFIRLENNGNSVKKNWSDQEMLLLLEGIEMYEDQWEKIA 338
Query: 240 QHVSG-KSEKDCITHFIKLPFGQEFI 264
HV G K +DCI F+ LP +I
Sbjct: 339 DHVGGHKRVEDCIEKFLSLPIEDNYI 364
Score = 62 (26.9 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 23/102 (22%), Positives = 49/102 (48%)
Query: 343 DVDDRASKGSLMRNTRQQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVE 402
D D + GS + GD + L + S + + EK + + I +V+
Sbjct: 378 DSRDGSVSGSKLMECVNDAVQTLLQGD---DKLGKVSDKSREISEKYIEESQAIIQELVK 434
Query: 403 VQMKEIQDKIIRFESLDLQME-EEWKQLEQVKNLLFVDQLSV 443
+ M++++ K + L+ Q+E E+ K +++ + +L D+LS+
Sbjct: 435 LTMEKLESKFTKLCDLETQLEMEKLKYVKESEKMLN-DRLSL 475
>SGD|S000003712 [details] [associations]
symbol:SWI3 "Subunit of the SWI/SNF chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0003682
"chromatin binding" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IEA;IMP;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000436 "carbon
catabolite activation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0031496
"positive regulation of mating type switching" evidence=IMP]
[GO:0042393 "histone binding" evidence=IPI] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 SGD:S000003712 EMBL:BK006943
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0005987 GO:GO:0043044
GO:GO:0000436 EMBL:X56792 eggNOG:COG5259 OrthoDB:EOG4PZNGG
GeneTree:ENSGT00390000018166 GO:GO:0044109 GO:GO:0031496
EMBL:M84390 EMBL:Z49451 PIR:S26706 RefSeq:NP_012359.1 PDB:2FQ3
PDBsum:2FQ3 ProteinModelPortal:P32591 SMR:P32591 DIP:DIP-2471N
IntAct:P32591 MINT:MINT-563159 STRING:P32591 PaxDb:P32591
PeptideAtlas:P32591 EnsemblFungi:YJL176C GeneID:853264
KEGG:sce:YJL176C CYGD:YJL176c HOGENOM:HOG000142068 KO:K11772
OMA:ERISENC EvolutionaryTrace:P32591 NextBio:973526
Genevestigator:P32591 GermOnline:YJL176C Uniprot:P32591
Length = 825
Score = 233 (87.1 bits), Expect = 4.3e-28, Sum P(3) = 4.3e-28
Identities = 44/94 (46%), Positives = 58/94 (61%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSYS+WF+ + I EV+ LPEFF +R PSK P VY YR+ +V YR NP+ + T
Sbjct: 307 IPSYSKWFNLEKIHSIEVQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTT 366
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINYFASVKTL 135
RR + GD ++ R+ FL WGLINY K L
Sbjct: 367 ARRNVSGDAAALFRLHKFLTKWGLINYQVDSKLL 400
Score = 153 (58.9 bits), Expect = 4.3e-28, Sum P(3) = 4.3e-28
Identities = 33/98 (33%), Positives = 57/98 (58%)
Query: 197 GVSSSDFRRVEISEEARSDWTEKETLQLLEAIMHFGDDWRKVAQHVSGKSEKDCITHFIK 256
G +S ++V+I E+ +W++++ +LL+ I FG DW KVA++V KS + CI F++
Sbjct: 508 GETSRPLKKVKILEQIDENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPEQCILRFLQ 567
Query: 257 LPFGQEFICKESDSE-DVDNKFFSINN-PSDAVSESEN 292
LP +F+ + + + D DN + P S+SEN
Sbjct: 568 LPIEDKFLYGDGNGKGDNDNGLGPLKYAPHLPFSKSEN 605
Score = 77 (32.2 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 29/167 (17%), Positives = 69/167 (41%)
Query: 285 DAVSESENVGATSPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDV 344
D + +N P K P + + NP+++ AFL L + +
Sbjct: 578 DGNGKGDNDNGLGPLKYAPHLPFSKSENPVLSTIAFLVGLVNPKTVQSMTQRAIQSAESI 637
Query: 345 DDRASKGSLMRNTRQQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQ 404
+ + S + + G ++ A++ + EE + + ++ +Q
Sbjct: 638 KSQKEEISDQKPIEHIKEG-------SEIAISSLGYRSHIFATNEERQMNFLTNELIRLQ 690
Query: 405 MKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFHKSNAR 451
M+++ K+ + L+ ME E K LE+ + L + +L+ F++++++
Sbjct: 691 MEKLDAKLNHLKKLEKFMELERKTLERQQENLLIQRLN--FNQNSSK 735
Score = 41 (19.5 bits), Expect = 4.3e-28, Sum P(3) = 4.3e-28
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 356 NTRQQEAGVASNGDATQNALARASVDASSLIEKEEL 391
N Q + + + N ++ ++++ SS+ EKEE+
Sbjct: 728 NFNQNSSKIVNVLSKCLNLISDSNINNSSVAEKEEI 763
>CGD|CAL0003837 [details] [associations]
symbol:orf19.7234 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0015616 "DNA
translocase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 CGD:CAL0003837 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AACQ01000092 eggNOG:COG5259 KO:K11762
RefSeq:XP_715034.1 ProteinModelPortal:Q59ZV7 STRING:Q59ZV7
GeneID:3643306 KEGG:cal:CaO19.7234 Uniprot:Q59ZV7
Length = 561
Score = 219 (82.2 bits), Expect = 3.3e-26, Sum P(4) = 3.3e-26
Identities = 46/96 (47%), Positives = 59/96 (61%)
Query: 40 VNVPSYSRWFSFDSISECEVKFLPEFF-DSRSPSKNPRVYRYYRDSIVKHYRENPSRKIT 98
V VPS+++WF I + E K LP+FF + S K+ + Y+Y RD IV +R NP +T
Sbjct: 63 VIVPSFAKWFDLSKIHDIEKKSLPDFFVEDGSGYKSSQDYKYIRDFIVNTFRLNPKEYLT 122
Query: 99 FTDVRRTLVGDVGSIRRVFDFLETWGLINYFASVKT 134
T VRR L GDV +I R+ FLE WGLINY KT
Sbjct: 123 ITAVRRNLSGDVTNIIRIHQFLEQWGLINYQIDPKT 158
Score = 87 (35.7 bits), Expect = 3.3e-26, Sum P(4) = 3.3e-26
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 184 LCARCYVRGNHRVGVSSSDFRRVEISEEARSDWTEKETLQLLEAIMHFG 232
LC CY +G SSDF +++ +EE W+E+E L LLE I FG
Sbjct: 282 LCEICYDQGLFPSSFHSSDFIQLKRTEEGEK-WSEQEILLLLEGIEMFG 329
Score = 85 (35.0 bits), Expect = 3.3e-26, Sum P(4) = 3.3e-26
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 230 HFGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICK---ESDSEDVDNKFFS 279
+ + W K+++HV+ K+ + CI FI+LP +F+ K E + +D S
Sbjct: 345 NLNNQWDKISEHVATKTREQCIIKFIQLPIEDKFLTKLIKEENEKDTTKSVVS 397
Score = 45 (20.9 bits), Expect = 3.3e-26, Sum P(4) = 3.3e-26
Identities = 14/87 (16%), Positives = 40/87 (45%)
Query: 379 SVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFV 438
S +A ++ +L+ ++ ++E+ +++ K+ + + L + + QL + + +
Sbjct: 419 SQNAEENLKHAQLEQTNLVNQVIELTLEKFNLKLKKIDELQANLLKYENQLNLERKQILL 478
Query: 439 DQLSVLFHKSNARKNGDRTEENVKTDV 465
++ V F K + K + V D+
Sbjct: 479 ERW-VQFEKISKLKESNPELSTVLDDL 504
>DICTYBASE|DDB_G0288285 [details] [associations]
symbol:mybX "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
dictyBase:DDB_G0288285 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
GenomeReviews:CM000154_GR SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000109 RefSeq:XP_636792.1 HSSP:P32591
ProteinModelPortal:Q54J55 PRIDE:Q54J55 EnsemblProtists:DDB0220513
GeneID:8626549 KEGG:ddi:DDB_G0288285 eggNOG:COG5259 OMA:WDLINCF
Uniprot:Q54J55
Length = 1620
Score = 215 (80.7 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 69/259 (26%), Positives = 123/259 (47%)
Query: 180 YDLTLCARCYVRGNHRVGVSSSDFRRVEISEEARSDWTEKETLQLLEAIMHFGDDWRKVA 239
Y + +C C+ GN+ + SS F+R+E + WT+ ETL LLE I F D+W++++
Sbjct: 894 YPMIICVNCFSSGNYENFIQSSSFQRIEQHQPEEFGWTDIETLLLLEGIEIFRDNWQEIS 953
Query: 240 QHVSG-KSEKDCITHFIKLPFGQEFICKESDSEDVDNKFFSINNPSDAVSESENVGATSP 298
++ G K+ + C+THFI+LP EF+ + K S P ++S+ E + + +P
Sbjct: 954 DYIGGSKTPEQCLTHFIRLPIEDEFL---------ERKISSF--PVGSLSKKE-IDSNNP 1001
Query: 299 SKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDD----RASKGSLM 354
+T +NPIM+ AF S+ L ++D + SK L
Sbjct: 1002 ---FSIT--YGVNNPIMSLVAFFSSYSQPPLGLLASKAAKVILEILNDPKYQQPSKEELE 1056
Query: 355 RNTRQQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIR 414
R Q+E D + + S + L EK++ + EK + E + KE ++
Sbjct: 1057 RI--QKEKDDKEKEDKEKELKEKESKE-KELKEKDDKEKEKE-KELKEREDKEKEEDKEA 1112
Query: 415 FESLDLQMEEEWKQLEQVK 433
+ +D + EE+ ++ ++ K
Sbjct: 1113 KDKVDKEKEEDKQKQDKEK 1131
Score = 117 (46.2 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 26/89 (29%), Positives = 48/89 (53%)
Query: 51 FDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTDVR------- 103
+ + E K++ + + N +Y+ YRD ++ Y++NP + ++ TDV+
Sbjct: 329 YSYVDSVEYKYIKK--KQKLQLSNKELYKIYRDYMITSYQKNPYQYLSVTDVKNHFINQN 386
Query: 104 -RTLVGDVGSIRRVFDFLETWGLINYFAS 131
+T ++ SI ++FDFLE W LIN F +
Sbjct: 387 KKTFKVNIRSIIKIFDFLEYWDLINCFVN 415
Score = 59 (25.8 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 48 WF-SFDSISECEVKFLPEFFDSRSPSKN 74
WF S D+I + E+ LPEFF + + N
Sbjct: 276 WFTSLDNIHQVEINNLPEFFQDDNENGN 303
>UNIPROTKB|I3LJ29 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
InterPro:IPR001357 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 SUPFAM:SSF46689 SUPFAM:SSF52113
GeneTree:ENSGT00390000018166 Ensembl:ENSSSCT00000029308 OMA:EWNISEN
Uniprot:I3LJ29
Length = 532
Score = 222 (83.2 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 40/87 (45%), Positives = 56/87 (64%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++ I E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 342 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 401
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV ++ RV FLE WGL+NY
Sbjct: 402 CRRNLTGDVCAVMRVHAFLEQWGLVNY 428
Score = 50 (22.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 212 ARSDWTEKETLQLLE 226
A +WTE+ETL LLE
Sbjct: 510 AGREWTEQETLLLLE 524
>UNIPROTKB|F1SLI6 [details] [associations]
symbol:LOC100626030 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
InterPro:IPR001357 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 SUPFAM:SSF46689 SUPFAM:SSF52113
GeneTree:ENSGT00390000018166 EMBL:CU633694 EMBL:CU929897
Ensembl:ENSSSCT00000012417 Uniprot:F1SLI6
Length = 1024
Score = 222 (83.2 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 40/87 (45%), Positives = 56/87 (64%)
Query: 42 VPSYSRWFSFDSISECEVKFLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTD 101
+PSY+ WF ++ I E + LPEFF+ ++ SK P +Y YR+ ++ YR NP +T T
Sbjct: 453 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 512
Query: 102 VRRTLVGDVGSIRRVFDFLETWGLINY 128
RR L GDV ++ RV FLE WGL+NY
Sbjct: 513 CRRNLTGDVCAVMRVHAFLEQWGLVNY 539
Score = 54 (24.1 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 212 ARSDWTEKETLQLLEAI 228
A +WTE+ETL LLE I
Sbjct: 621 AGREWTEQETLLLLETI 637
>UNIPROTKB|I3LNI6 [details] [associations]
symbol:LOC100737447 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071564 "npBAF complex"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] InterPro:IPR017884 PROSITE:PS51293
GeneTree:ENSGT00390000018166 EMBL:CU929897
Ensembl:ENSSSCT00000023426 Uniprot:I3LNI6
Length = 301
Score = 100 (40.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 231 FGDDWRKVAQHVSGKSEKDCITHFIKLPFGQEFICKESDS 270
+ DDW KV++HV +++ +CI HF++LP ++ + SD+
Sbjct: 2 YKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL-ENSDA 40
Score = 87 (35.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 361 EAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDL 420
E VA+ A ALA A+ A L EE ++ ++ +VE QMK+++ K+ FE L+
Sbjct: 227 EGNVAT---AAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET 283
Query: 421 QMEEE 425
M+ E
Sbjct: 284 IMDRE 288
Score = 53 (23.7 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 21/103 (20%), Positives = 40/103 (38%)
Query: 291 ENVGATSPSKRMRLTPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXTTLSDVDDRASK 350
EN A+ + P + + NP+M+ AFL+++ S V +
Sbjct: 36 ENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPL 95
Query: 351 GSLMRNTRQ-QEAGVASNGDATQNALARASVDASSLIEKEELD 392
+ + ++ QEA AS L + + + E E+L+
Sbjct: 96 ELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLE 138
>UNIPROTKB|E1C6E2 [details] [associations]
symbol:TADA2A "Transcriptional adapter 2-alpha"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293
GeneTree:ENSGT00530000063657 IPI:IPI00598489 EMBL:AADN02025734
Ensembl:ENSGALT00000008751 ArrayExpress:E1C6E2 Uniprot:E1C6E2
Length = 443
Score = 133 (51.9 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 163 CNGCKTLCT---IACFACDKYDLTLCARCYVRG--------NHRVGVSSSDFRRVEISEE 211
C GC + T + C C LC +C+ RG +H + +SDF ++
Sbjct: 17 CRGCSSYLTEPYVKCAECGPPPFLLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLD---- 72
Query: 212 ARSDWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
+WT +E + LLEA+M G +W+ VA + KS+++C H++K
Sbjct: 73 --PNWTAQEEMALLEAVMDCGFGNWQDVANQMCTKSKEECEKHYMK 116
Score = 43 (20.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 388 KEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVK 433
KE D+ + + + DK I +L+ ++ E K+L++ +
Sbjct: 245 KEVQDLYETMRRFARILGPVEHDKFIESHALEFELRREIKRLQEYR 290
>UNIPROTKB|F1P5V3 [details] [associations]
symbol:TADA2A "Transcriptional adapter 2-alpha"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000125 "PCAF complex" evidence=IEA] [GO:0001932 "regulation of
protein phosphorylation" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0031063 "regulation of
histone deacetylation" evidence=IEA] [GO:0031647 "regulation of
protein stability" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0072686 "mitotic spindle"
evidence=IEA] [GO:0090043 "regulation of tubulin deacetylation"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 InterPro:IPR016827
PIRSF:PIRSF025024 PROSITE:PS51293 GeneTree:ENSGT00530000063657
GO:GO:0043966 GO:GO:0004402 GO:GO:0000125 OMA:HNETAIP
EMBL:AADN02025734 IPI:IPI00679949 Ensembl:ENSGALT00000008750
ArrayExpress:F1P5V3 Uniprot:F1P5V3
Length = 444
Score = 133 (51.9 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 163 CNGCKTLCT---IACFACDKYDLTLCARCYVRG--------NHRVGVSSSDFRRVEISEE 211
C GC + T + C C LC +C+ RG +H + +SDF ++
Sbjct: 17 CRGCSSYLTEPYVKCAECGPPPFLLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLD---- 72
Query: 212 ARSDWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
+WT +E + LLEA+M G +W+ VA + KS+++C H++K
Sbjct: 73 --PNWTAQEEMALLEAVMDCGFGNWQDVANQMCTKSKEECEKHYMK 116
Score = 43 (20.2 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 388 KEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVK 433
KE D+ + + + DK I +L+ ++ E K+L++ +
Sbjct: 246 KEVQDLYETMRRFARILGPVEHDKFIESHALEFELRREIKRLQEYR 291
>UNIPROTKB|Q5ZJF3 [details] [associations]
symbol:TADA2A "Transcriptional adapter 2-alpha"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0005634 GO:GO:0005694 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 eggNOG:COG5114 KO:K11314 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293 CTD:6871
HOGENOM:HOG000068147 HOVERGEN:HBG057413 OrthoDB:EOG4BK53W
EMBL:AJ720481 IPI:IPI00598489 RefSeq:NP_001012825.1
UniGene:Gga.44819 ProteinModelPortal:Q5ZJF3 SMR:Q5ZJF3
STRING:Q5ZJF3 GeneID:417656 KEGG:gga:417656 InParanoid:Q5ZJF3
NextBio:20820925 Uniprot:Q5ZJF3
Length = 446
Score = 133 (51.9 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 163 CNGCKTLCT---IACFACDKYDLTLCARCYVRG--------NHRVGVSSSDFRRVEISEE 211
C GC + T + C C LC +C+ RG +H + +SDF ++
Sbjct: 17 CRGCSSYLTEPYVKCAECGPPPFLLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLD---- 72
Query: 212 ARSDWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
+WT +E + LLEA+M G +W+ VA + KS+++C H++K
Sbjct: 73 --PNWTAQEEMALLEAVMDCGFGNWQDVANQMCTKSKEECEKHYMK 116
Score = 43 (20.2 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 388 KEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVK 433
KE D+ + + + DK I +L+ ++ E K+L++ +
Sbjct: 248 KEVQDLYETMRRFARILGPVEHDKFIESHALEFELRREIKRLQEYR 293
>MGI|MGI:2144471 [details] [associations]
symbol:Tada2a "transcriptional adaptor 2A" species:10090
"Mus musculus" [GO:0000125 "PCAF complex" evidence=ISO] [GO:0001932
"regulation of protein phosphorylation" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007067 "mitosis"
evidence=IMP] [GO:0031063 "regulation of histone deacetylation"
evidence=IGI] [GO:0031647 "regulation of protein stability"
evidence=IMP] [GO:0043966 "histone H3 acetylation" evidence=ISO]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0090043 "regulation
of tubulin deacetylation" evidence=IGI] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 MGI:MGI:2144471 GO:GO:0005634
GO:GO:0005694 GO:GO:0007067 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0031647 EMBL:AL596447 eggNOG:COG5114 KO:K11314
InterPro:IPR017884 InterPro:IPR016827 PIRSF:PIRSF025024
PROSITE:PS51293 GeneTree:ENSGT00530000063657 GO:GO:0005671
GO:GO:0001932 GO:GO:0072686 GO:GO:0043966 GO:GO:0004402
EMBL:AL645615 GO:GO:0000125 CTD:6871 HOGENOM:HOG000068147
HOVERGEN:HBG057413 OMA:EECESHY OrthoDB:EOG4BK53W ChiTaRS:TADA2A
EMBL:AK083467 EMBL:AK157938 EMBL:BC025448 EMBL:BC038821
IPI:IPI00229752 RefSeq:NP_766150.1 UniGene:Mm.45159 PDB:2AQE
PDB:2AQF PDB:2CUJ PDBsum:2AQE PDBsum:2AQF PDBsum:2CUJ
ProteinModelPortal:Q8CHV6 SMR:Q8CHV6 STRING:Q8CHV6
PhosphoSite:Q8CHV6 PRIDE:Q8CHV6 Ensembl:ENSMUST00000018795
GeneID:217031 KEGG:mmu:217031 UCSC:uc007kqf.1 InParanoid:Q8CHV6
EvolutionaryTrace:Q8CHV6 NextBio:375522 Bgee:Q8CHV6
Genevestigator:Q8CHV6 GermOnline:ENSMUSG00000018651 GO:GO:0031063
GO:GO:0090043 Uniprot:Q8CHV6
Length = 443
Score = 131 (51.2 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 163 CNGCKTLCT---IACFACDKYDLTLCARCYVRG--------NHRVGVSSSDFRRVEISEE 211
C GC + T I C C LC +C+ RG +H + +SDF ++ S
Sbjct: 17 CRGCSSYLTEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLDPS-- 74
Query: 212 ARSDWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
WT +E + LLEA+M G +W+ VA + K++++C H++K
Sbjct: 75 ----WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMK 116
Score = 44 (20.5 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 16/75 (21%), Positives = 33/75 (44%)
Query: 388 KEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFHK 447
KE D+ + + + DK I +L+ ++ E K+L++ + + S +
Sbjct: 245 KEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTY- 303
Query: 448 SNARKNGDRTEENVK 462
+ +K R EE +K
Sbjct: 304 DHLKKT--REEERLK 316
>ZFIN|ZDB-GENE-060929-508 [details] [associations]
symbol:tada2a "transcriptional adaptor 2A"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 ZFIN:ZDB-GENE-060929-508 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293
GeneTree:ENSGT00530000063657 EMBL:CR450717 IPI:IPI00996908
Ensembl:ENSDART00000130670 Uniprot:E7EZS5
Length = 445
Score = 136 (52.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 163 CNGCKTLCT---IACFACDKYDLTLCARCYVRG--------NHRVGVSSSDFRRVEISEE 211
C GC + I C C LC +C+ RG +H+ + +SDF +E
Sbjct: 17 CRGCSSYLVEPYIKCAECGPSPFLLCLQCFTRGYEYKKHQSDHKYEIMTSDFPVLE---- 72
Query: 212 ARSDWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
S WT +E + LLEA+M G +W+ VA + K++++C H++K
Sbjct: 73 --SGWTAQEEMALLEAVMDCGFGNWQDVAYQMRSKTKEECEGHYMK 116
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/57 (17%), Positives = 26/57 (45%)
Query: 410 DKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSV-LFHKSNARKNGDRTEENVKTDV 465
DK I +L+ ++ E +L++ ++ ++ + + +R + N+ DV
Sbjct: 269 DKFIESHTLEFELRREIHRLQEYRSEGIQSFCGAKVYERVKRTREDERRKRNMLCDV 325
>UNIPROTKB|F1S1A3 [details] [associations]
symbol:TADA2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090043 "regulation of tubulin deacetylation"
evidence=IEA] [GO:0072686 "mitotic spindle" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0031647
"regulation of protein stability" evidence=IEA] [GO:0031063
"regulation of histone deacetylation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0001932 "regulation
of protein phosphorylation" evidence=IEA] [GO:0000125 "PCAF
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000433 InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00291 SMART:SM00717
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 InterPro:IPR016827
PIRSF:PIRSF025024 PROSITE:PS51293 GeneTree:ENSGT00530000063657
GO:GO:0043966 GO:GO:0004402 GO:GO:0000125 EMBL:AEMK01178617
EMBL:CU640469 EMBL:FP565631 Ensembl:ENSSSCT00000019263 OMA:HNETAIP
Uniprot:F1S1A3
Length = 387
Score = 125 (49.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 163 CNGCKTLCT---IACFACDKYDLTLCARCYVRG--------NHRVGVSSSDFRRVEISEE 211
C GC + I C C LC +C+ RG +H + +SDF ++ S
Sbjct: 14 CRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLDPS-- 71
Query: 212 ARSDWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
WT +E + LLEA+M G +W+ VA + K++++C H++K
Sbjct: 72 ----WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMK 113
Score = 44 (20.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 16/75 (21%), Positives = 33/75 (44%)
Query: 388 KEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFHK 447
KE D+ + + + DK I +L+ ++ E K+L++ + + S +
Sbjct: 242 KEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTY- 300
Query: 448 SNARKNGDRTEENVK 462
+ +K R EE +K
Sbjct: 301 DHLKKT--REEERLK 313
>UNIPROTKB|Q3SZP8 [details] [associations]
symbol:TADA2A "Transcriptional adapter 2-alpha"
species:9913 "Bos taurus" [GO:0005694 "chromosome" evidence=IEA]
[GO:0090043 "regulation of tubulin deacetylation" evidence=IEA]
[GO:0072686 "mitotic spindle" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0031647 "regulation of protein
stability" evidence=IEA] [GO:0031063 "regulation of histone
deacetylation" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0001932 "regulation of protein phosphorylation"
evidence=IEA] [GO:0000125 "PCAF complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR000433 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00291 SMART:SM00717 GO:GO:0005694
GO:GO:0006355 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:COG5114
KO:K11314 InterPro:IPR017884 InterPro:IPR016827 PIRSF:PIRSF025024
PROSITE:PS51293 GeneTree:ENSGT00530000063657 GO:GO:0043966
GO:GO:0004402 GO:GO:0000125 EMBL:BC102758 IPI:IPI00717810
RefSeq:NP_001029416.1 UniGene:Bt.20913 ProteinModelPortal:Q3SZP8
SMR:Q3SZP8 STRING:Q3SZP8 Ensembl:ENSBTAT00000019537 GeneID:505401
KEGG:bta:505401 CTD:6871 HOGENOM:HOG000068147 HOVERGEN:HBG057413
InParanoid:Q3SZP8 OMA:EECESHY OrthoDB:EOG4BK53W NextBio:20867124
Uniprot:Q3SZP8
Length = 443
Score = 125 (49.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 163 CNGCKTLCT---IACFACDKYDLTLCARCYVRG--------NHRVGVSSSDFRRVEISEE 211
C GC + I C C LC +C+ RG +H + +SDF ++ S
Sbjct: 17 CRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLDPS-- 74
Query: 212 ARSDWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
WT +E + LLEA+M G +W+ VA + K++++C H++K
Sbjct: 75 ----WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMK 116
Score = 44 (20.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 16/75 (21%), Positives = 33/75 (44%)
Query: 388 KEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFHK 447
KE D+ + + + DK I +L+ ++ E K+L++ + + S +
Sbjct: 245 KEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTY- 303
Query: 448 SNARKNGDRTEENVK 462
+ +K R EE +K
Sbjct: 304 DHLKKT--REEERLK 316
>UNIPROTKB|F1PBY0 [details] [associations]
symbol:TADA2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00291 SMART:SM00717 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
KO:K11314 InterPro:IPR017884 InterPro:IPR016827 PIRSF:PIRSF025024
PROSITE:PS51293 GeneTree:ENSGT00530000063657 CTD:6871 OMA:EECESHY
EMBL:AAEX03006613 RefSeq:XP_853578.1 Ensembl:ENSCAFT00000028817
GeneID:480596 KEGG:cfa:480596 Uniprot:F1PBY0
Length = 443
Score = 125 (49.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 163 CNGCKTLCT---IACFACDKYDLTLCARCYVRG--------NHRVGVSSSDFRRVEISEE 211
C GC + I C C LC +C+ RG +H + +SDF ++ S
Sbjct: 17 CRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLDPS-- 74
Query: 212 ARSDWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
WT +E + LLEA+M G +W+ VA + K++++C H++K
Sbjct: 75 ----WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMK 116
Score = 44 (20.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 16/75 (21%), Positives = 33/75 (44%)
Query: 388 KEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFHK 447
KE D+ + + + DK I +L+ ++ E K+L++ + + S +
Sbjct: 245 KEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTY- 303
Query: 448 SNARKNGDRTEENVK 462
+ +K R EE +K
Sbjct: 304 DHLKKT--REEERLK 316
>UNIPROTKB|O75478 [details] [associations]
symbol:TADA2A "Transcriptional adapter 2-alpha"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0001932 "regulation of
protein phosphorylation" evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0031063 "regulation of histone
deacetylation" evidence=IEA] [GO:0031647 "regulation of protein
stability" evidence=IEA] [GO:0072686 "mitotic spindle"
evidence=IEA] [GO:0090043 "regulation of tubulin deacetylation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0000125
"PCAF complex" evidence=IDA] [GO:0043966 "histone H3 acetylation"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0003712
"transcription cofactor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 GO:GO:0005694 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006366 eggNOG:COG5114 KO:K11314 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293 GO:GO:0003712
GO:GO:0043966 EMBL:AC068400 GO:GO:0000125 EMBL:AC004099 CTD:6871
HOGENOM:HOG000068147 HOVERGEN:HBG057413 OMA:EECESHY
OrthoDB:EOG4BK53W EMBL:AF064094 EMBL:AK022767 EMBL:AC068447
EMBL:BC001172 EMBL:BC011753 EMBL:AF069732 IPI:IPI00289581
IPI:IPI00306347 RefSeq:NP_001159577.1 RefSeq:NP_001479.3
RefSeq:NP_597683.2 UniGene:Hs.500066 PDB:1X41 PDBsum:1X41
ProteinModelPortal:O75478 SMR:O75478 DIP:DIP-28151N IntAct:O75478
MINT:MINT-1447145 STRING:O75478 PhosphoSite:O75478 PRIDE:O75478
DNASU:6871 Ensembl:ENST00000225396 Ensembl:ENST00000394395
Ensembl:ENST00000417170 Ensembl:ENST00000490992 GeneID:6871
KEGG:hsa:6871 UCSC:uc002hnt.3 UCSC:uc002hnu.1 GeneCards:GC17P035767
H-InvDB:HIX0013744 HGNC:HGNC:11531 MIM:602276 neXtProt:NX_O75478
PharmGKB:PA36306 InParanoid:O75478 PhylomeDB:O75478 ChiTaRS:TADA2A
EvolutionaryTrace:O75478 GenomeRNAi:6871 NextBio:26821
ArrayExpress:O75478 Bgee:O75478 CleanEx:HS_TADA2L
Genevestigator:O75478 GermOnline:ENSG00000108264 Uniprot:O75478
Length = 443
Score = 125 (49.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 163 CNGCKTLCT---IACFACDKYDLTLCARCYVRG--------NHRVGVSSSDFRRVEISEE 211
C GC + I C C LC +C+ RG +H + +SDF ++ S
Sbjct: 17 CRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLDPS-- 74
Query: 212 ARSDWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
WT +E + LLEA+M G +W+ VA + K++++C H++K
Sbjct: 75 ----WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMK 116
Score = 44 (20.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 16/75 (21%), Positives = 33/75 (44%)
Query: 388 KEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFHK 447
KE D+ + + + DK I +L+ ++ E K+L++ + + S +
Sbjct: 245 KEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTY- 303
Query: 448 SNARKNGDRTEENVK 462
+ +K R EE +K
Sbjct: 304 DHLKKT--REEERLK 316
>RGD|1309959 [details] [associations]
symbol:Tada2a "transcriptional adaptor 2A" species:10116 "Rattus
norvegicus" [GO:0000125 "PCAF complex" evidence=IEA;ISO]
[GO:0001932 "regulation of protein phosphorylation"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA;ISO]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031063
"regulation of histone deacetylation" evidence=IEA;ISO] [GO:0031647
"regulation of protein stability" evidence=IEA;ISO] [GO:0043966
"histone H3 acetylation" evidence=IEA;ISO] [GO:0072686 "mitotic
spindle" evidence=IEA;ISO] [GO:0090043 "regulation of tubulin
deacetylation" evidence=IEA;ISO] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 RGD:1309959 GO:GO:0005694 GO:GO:0006355 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 eggNOG:COG5114 KO:K11314 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293
GeneTree:ENSGT00530000063657 GO:GO:0043966 GO:GO:0004402
GO:GO:0000125 CTD:6871 HOGENOM:HOG000068147 HOVERGEN:HBG057413
OMA:EECESHY OrthoDB:EOG4BK53W EMBL:EF121983 EMBL:EF121984
EMBL:BC079084 IPI:IPI00464686 RefSeq:NP_001012141.1 UniGene:Rn.8027
ProteinModelPortal:Q6AYE3 SMR:Q6AYE3 STRING:Q6AYE3 PRIDE:Q6AYE3
Ensembl:ENSRNOT00000003699 GeneID:360581 KEGG:rno:360581
InParanoid:Q6AYE3 NextBio:673315 ArrayExpress:Q6AYE3
Genevestigator:Q6AYE3 GermOnline:ENSRNOG00000002757 Uniprot:Q6AYE3
Length = 443
Score = 125 (49.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 163 CNGCKTLCT---IACFACDKYDLTLCARCYVRG--------NHRVGVSSSDFRRVEISEE 211
C GC + I C C LC +C+ RG +H + +SDF ++ S
Sbjct: 17 CRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLDPS-- 74
Query: 212 ARSDWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
WT +E + LLEA+M G +W+ VA + K++++C H++K
Sbjct: 75 ----WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMK 116
Score = 44 (20.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 16/75 (21%), Positives = 33/75 (44%)
Query: 388 KEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFHK 447
KE D+ + + + DK I +L+ ++ E K+L++ + + S +
Sbjct: 245 KEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTY- 303
Query: 448 SNARKNGDRTEENVK 462
+ +K R EE +K
Sbjct: 304 DHLKKT--REEERLK 316
>UNIPROTKB|Q6AYE3 [details] [associations]
symbol:Tada2a "Transcriptional adapter 2-alpha"
species:10116 "Rattus norvegicus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00291 SMART:SM00717 RGD:1309959 GO:GO:0005694 GO:GO:0006355
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:COG5114 KO:K11314
InterPro:IPR017884 InterPro:IPR016827 PIRSF:PIRSF025024
PROSITE:PS51293 GeneTree:ENSGT00530000063657 GO:GO:0043966
GO:GO:0004402 GO:GO:0000125 CTD:6871 HOGENOM:HOG000068147
HOVERGEN:HBG057413 OMA:EECESHY OrthoDB:EOG4BK53W EMBL:EF121983
EMBL:EF121984 EMBL:BC079084 IPI:IPI00464686 RefSeq:NP_001012141.1
UniGene:Rn.8027 ProteinModelPortal:Q6AYE3 SMR:Q6AYE3 STRING:Q6AYE3
PRIDE:Q6AYE3 Ensembl:ENSRNOT00000003699 GeneID:360581
KEGG:rno:360581 InParanoid:Q6AYE3 NextBio:673315
ArrayExpress:Q6AYE3 Genevestigator:Q6AYE3
GermOnline:ENSRNOG00000002757 Uniprot:Q6AYE3
Length = 443
Score = 125 (49.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 163 CNGCKTLCT---IACFACDKYDLTLCARCYVRG--------NHRVGVSSSDFRRVEISEE 211
C GC + I C C LC +C+ RG +H + +SDF ++ S
Sbjct: 17 CRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLDPS-- 74
Query: 212 ARSDWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
WT +E + LLEA+M G +W+ VA + K++++C H++K
Sbjct: 75 ----WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMK 116
Score = 44 (20.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 16/75 (21%), Positives = 33/75 (44%)
Query: 388 KEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLFVDQLSVLFHK 447
KE D+ + + + DK I +L+ ++ E K+L++ + + S +
Sbjct: 245 KEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTY- 303
Query: 448 SNARKNGDRTEENVK 462
+ +K R EE +K
Sbjct: 304 DHLKKT--REEERLK 316
>UNIPROTKB|F1S1A4 [details] [associations]
symbol:F1S1A4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00291 SMART:SM00717 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GeneTree:ENSGT00530000063657
EMBL:CU640469 EMBL:FP565631 Ensembl:ENSSSCT00000019262 OMA:ESHACAR
Uniprot:F1S1A4
Length = 445
Score = 125 (49.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 163 CNGCKTLCT---IACFACDKYDLTLCARCYVRG--------NHRVGVSSSDFRRVEISEE 211
C GC + I C C LC +C+ RG +H + +SDF ++ S
Sbjct: 14 CRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLDPS-- 71
Query: 212 ARSDWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
WT +E + LLEA+M G +W+ VA + K++++C H++K
Sbjct: 72 ----WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMK 113
>SGD|S000002856 [details] [associations]
symbol:ADA2 "Transcription coactivator" species:4932
"Saccharomyces cerevisiae" [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IDA]
[GO:0035066 "positive regulation of histone acetylation"
evidence=IMP] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0001786 "phosphatidylserine binding"
evidence=IMP;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0003713 "transcription
coactivator activity" evidence=IDA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0003682 "chromatin binding"
evidence=IEA;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0046695 "SLIK (SAGA-like) complex" evidence=IDA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 Pfam:PF04433
PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 SGD:S000002856 EMBL:U33007 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016573 EMBL:BK006938
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0003713 eggNOG:COG5114 HOGENOM:HOG000163455
KO:K11314 OrthoDB:EOG441TKV GO:GO:0000124 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293 EMBL:M95396
PIR:A43252 RefSeq:NP_010736.3 RefSeq:NP_010740.3 PDB:2ELJ
PDBsum:2ELJ ProteinModelPortal:Q02336 SMR:Q02336 DIP:DIP-183N
IntAct:Q02336 MINT:MINT-403023 STRING:Q02336 PaxDb:Q02336
PeptideAtlas:Q02336 EnsemblFungi:YDR448W GeneID:852059
GeneID:852063 KEGG:sce:YDR448W KEGG:sce:YDR452W CYGD:YDR448w
GeneTree:ENSGT00530000063657 KO:K06018 OMA:GRSPSHI
EvolutionaryTrace:Q02336 NextBio:970331 Genevestigator:Q02336
GermOnline:YDR448W GO:GO:0005671 GO:GO:0046695 GO:GO:0001786
GO:GO:0000183 GO:GO:0006348 GO:GO:0035066 Uniprot:Q02336
Length = 434
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 28/103 (27%), Positives = 51/103 (49%)
Query: 163 CNGCKTLCT----IACFACDKYDLTLCARCYVRGNHRVGVSSS--DFRRVEISEEAR--S 214
C+ C CT ++C C +YDL C C+ +G++ G D+R +E +
Sbjct: 7 CDVCSADCTNRVRVSCAICPEYDL--CVPCFSQGSY-TGKHRPYHDYRIIETNSYPILCP 63
Query: 215 DWTEKETLQLLEAIMHFG-DDWRKVAQHVSGKSEKDCITHFIK 256
DW E LQL++ G +W+ +A H+ + +++ H++K
Sbjct: 64 DWGADEELQLIKGAQTLGLGNWQDIADHIGSRGKEEVKEHYLK 106
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 466 406 0.00078 118 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 620 (66 KB)
Total size of DFA: 267 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.15u 0.11s 35.26t Elapsed: 00:00:01
Total cpu time: 35.16u 0.11s 35.27t Elapsed: 00:00:01
Start: Fri May 10 06:12:51 2013 End: Fri May 10 06:12:52 2013