Query 012335
Match_columns 466
No_of_seqs 185 out of 1487
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 07:24:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012335.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012335hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4drs_A Pyruvate kinase; glycol 100.0 3E-128 1E-132 1022.1 52.4 442 3-465 38-525 (526)
2 3gr4_A Pyruvate kinase isozyme 100.0 3E-127 9E-132 1015.3 52.3 445 6-466 59-550 (550)
3 3khd_A Pyruvate kinase; malari 100.0 8E-128 3E-132 1013.4 46.2 438 7-466 44-520 (520)
4 3gg8_A Pyruvate kinase; malari 100.0 1E-126 4E-131 1004.0 52.8 439 7-466 34-511 (511)
5 3hqn_D Pyruvate kinase, PK; TI 100.0 3E-127 1E-131 1007.8 46.7 443 7-466 18-499 (499)
6 3t05_A Pyruvate kinase, PK; te 100.0 5E-124 2E-128 1003.6 49.2 438 7-466 21-494 (606)
7 1e0t_A Pyruvate kinase, PK; ph 100.0 5E-123 2E-127 973.0 46.8 435 9-465 2-470 (470)
8 3qtg_A Pyruvate kinase, PK; TI 100.0 5E-121 2E-125 950.1 45.6 420 7-463 13-460 (461)
9 2e28_A Pyruvate kinase, PK; al 100.0 3E-120 1E-124 976.4 50.3 436 8-465 2-474 (587)
10 1a3w_A Pyruvate kinase; allost 100.0 2E-120 8E-125 959.9 41.5 445 6-465 16-500 (500)
11 2vws_A YFAU, 2-keto-3-deoxy su 99.6 1.1E-15 3.6E-20 150.6 4.9 101 184-285 80-215 (267)
12 2v5j_A 2,4-dihydroxyhept-2-ENE 99.5 3E-15 1E-19 148.8 6.7 102 183-285 100-236 (287)
13 1sgj_A Citrate lyase, beta sub 99.5 8.6E-15 2.9E-19 145.2 8.8 103 181-285 81-191 (284)
14 3qz6_A HPCH/HPAI aldolase; str 99.5 1.2E-14 4.1E-19 142.6 8.1 102 185-287 79-215 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.5 1.6E-14 5.4E-19 141.3 8.5 101 184-285 81-215 (256)
16 1izc_A Macrophomate synthase i 99.5 2E-14 6.9E-19 145.9 6.9 102 185-287 108-254 (339)
17 2xz9_A Phosphoenolpyruvate-pro 99.1 3.4E-11 1.2E-15 121.5 7.0 113 176-289 117-256 (324)
18 3qll_A Citrate lyase; beta bar 99.0 2.5E-10 8.7E-15 114.8 6.7 105 180-285 113-226 (316)
19 3qqw_A Putative citrate lyase; 98.9 7.9E-10 2.7E-14 111.9 6.2 92 194-285 110-224 (332)
20 1u5h_A CITE; TIM barrel, struc 98.9 1.2E-09 4E-14 107.7 5.6 95 182-285 72-179 (273)
21 2ols_A Phosphoenolpyruvate syn 98.9 2E-09 6.8E-14 120.4 7.1 111 179-290 622-756 (794)
22 3r4i_A Citrate lyase; TIM beta 98.8 3.2E-09 1.1E-13 107.7 7.1 92 194-285 109-223 (339)
23 2hwg_A Phosphoenolpyruvate-pro 98.8 5.8E-09 2E-13 112.4 7.8 111 177-288 367-504 (575)
24 2wqd_A Phosphoenolpyruvate-pro 98.8 7.3E-09 2.5E-13 111.6 7.3 109 180-289 372-507 (572)
25 3oyz_A Malate synthase; TIM ba 98.7 1.6E-08 5.6E-13 104.5 6.4 105 180-285 94-229 (433)
26 1vbg_A Pyruvate,orthophosphate 98.1 5.6E-06 1.9E-10 93.2 8.9 96 195-290 701-840 (876)
27 1kbl_A PPDK, pyruvate phosphat 98.0 4.4E-06 1.5E-10 94.0 5.1 113 177-290 673-834 (873)
28 3cuz_A MSA, malate synthase A; 97.9 5.7E-05 2E-09 80.3 12.6 209 7-285 87-327 (532)
29 3cux_A Malate synthase; TIM ba 97.4 0.00022 7.4E-09 75.8 7.2 92 193-285 202-324 (528)
30 1p7t_A MSG, malate synthase G; 97.2 0.00026 9E-09 76.8 6.1 101 184-285 372-505 (731)
31 1h6z_A Pyruvate phosphate diki 96.8 0.0024 8.3E-08 72.0 8.8 116 175-290 698-860 (913)
32 2x0s_A Pyruvate phosphate diki 95.1 0.049 1.7E-06 61.8 9.1 93 198-290 727-860 (913)
33 3odm_A Pepcase, PEPC, phosphoe 94.6 0.056 1.9E-06 57.2 7.4 107 194-300 138-274 (560)
34 1vp8_A Hypothetical protein AF 94.3 1.2 3.9E-05 41.2 14.4 119 333-454 26-167 (201)
35 1jqo_A Phosphoenolpyruvate car 94.2 0.14 4.8E-06 58.0 10.0 108 195-302 528-654 (970)
36 1t57_A Conserved protein MTH16 93.9 1.2 4.1E-05 41.2 13.8 119 333-454 34-174 (206)
37 1jqn_A Pepcase, PEPC, phosphoe 93.0 0.16 5.6E-06 57.0 7.7 109 193-301 466-593 (883)
38 2qjg_A Putative aldolase MJ040 92.3 1.2 4.3E-05 42.4 12.1 45 24-68 102-148 (273)
39 1w8s_A FBP aldolase, fructose- 91.7 1.7 5.9E-05 41.8 12.3 69 189-260 166-239 (263)
40 4g9p_A 4-hydroxy-3-methylbut-2 84.3 3.3 0.00011 42.3 9.0 99 184-287 41-144 (406)
41 1p1x_A Deoxyribose-phosphate a 81.4 5 0.00017 38.7 8.7 109 177-290 23-146 (260)
42 1ub3_A Aldolase protein; schif 79.0 3.4 0.00012 38.8 6.5 56 177-238 14-69 (220)
43 3nvt_A 3-deoxy-D-arabino-heptu 77.1 4.8 0.00016 41.0 7.4 86 189-290 163-259 (385)
44 1w8s_A FBP aldolase, fructose- 76.2 42 0.0014 31.8 13.6 152 180-379 39-202 (263)
45 1vcv_A Probable deoxyribose-ph 75.6 3.2 0.00011 39.2 5.2 105 177-290 12-125 (226)
46 1n7k_A Deoxyribose-phosphate a 73.5 30 0.001 32.6 11.4 100 177-287 31-142 (234)
47 3fkr_A L-2-keto-3-deoxyarabona 72.6 11 0.00039 36.8 8.6 96 189-287 36-144 (309)
48 3daq_A DHDPS, dihydrodipicolin 72.3 18 0.00061 35.0 9.9 94 189-286 30-134 (292)
49 1zco_A 2-dehydro-3-deoxyphosph 71.9 9.1 0.00031 36.7 7.6 86 189-290 44-140 (262)
50 4fxs_A Inosine-5'-monophosphat 71.5 6 0.00021 41.5 6.7 50 10-59 219-268 (496)
51 1ydn_A Hydroxymethylglutaryl-C 69.5 22 0.00075 34.2 9.8 99 179-284 23-137 (295)
52 3ble_A Citramalate synthase fr 69.0 24 0.00082 34.9 10.2 127 178-310 37-177 (337)
53 3b4u_A Dihydrodipicolinate syn 69.0 24 0.0008 34.2 9.9 96 189-287 31-140 (294)
54 3qze_A DHDPS, dihydrodipicolin 67.9 17 0.00059 35.6 8.8 94 189-286 51-155 (314)
55 2wkj_A N-acetylneuraminate lya 67.4 31 0.0011 33.5 10.5 94 189-286 39-144 (303)
56 3s5o_A 4-hydroxy-2-oxoglutarat 67.3 32 0.0011 33.5 10.6 96 189-287 42-149 (307)
57 3m5v_A DHDPS, dihydrodipicolin 67.0 20 0.0007 34.8 9.1 94 189-286 35-140 (301)
58 4fo4_A Inosine 5'-monophosphat 66.7 9.3 0.00032 38.5 6.7 48 12-59 98-145 (366)
59 1f6k_A N-acetylneuraminate lya 66.7 38 0.0013 32.6 10.9 95 189-287 31-137 (293)
60 2ehh_A DHDPS, dihydrodipicolin 66.6 33 0.0011 33.1 10.4 95 189-287 28-133 (294)
61 3vnd_A TSA, tryptophan synthas 66.1 21 0.00071 34.3 8.7 109 184-312 35-172 (267)
62 1mzh_A Deoxyribose-phosphate a 65.3 60 0.0021 29.9 11.6 56 177-240 15-70 (225)
63 3l21_A DHDPS, dihydrodipicolin 64.9 17 0.00058 35.4 8.0 94 189-286 43-147 (304)
64 3i65_A Dihydroorotate dehydrog 64.5 7 0.00024 40.2 5.3 102 177-282 278-402 (415)
65 1at0_A 17-hedgehog; developmen 64.4 23 0.00078 30.6 7.9 48 90-144 58-116 (145)
66 2yxg_A DHDPS, dihydrodipicolin 63.6 30 0.001 33.3 9.5 95 189-287 28-133 (289)
67 3oa3_A Aldolase; structural ge 63.1 20 0.00068 35.0 7.9 55 177-237 69-123 (288)
68 3khj_A Inosine-5-monophosphate 63.0 9.9 0.00034 38.2 6.0 45 13-59 98-142 (361)
69 1xky_A Dihydrodipicolinate syn 63.0 31 0.001 33.5 9.4 95 189-287 40-145 (301)
70 3cpr_A Dihydrodipicolinate syn 62.9 40 0.0014 32.7 10.3 98 186-287 41-149 (304)
71 3si9_A DHDPS, dihydrodipicolin 62.6 21 0.00072 35.0 8.2 94 189-286 50-154 (315)
72 1eep_A Inosine 5'-monophosphat 62.5 9 0.00031 38.8 5.7 49 11-59 142-190 (404)
73 3kws_A Putative sugar isomeras 62.1 57 0.0019 30.3 11.0 127 183-311 39-188 (287)
74 3ngj_A Deoxyribose-phosphate a 61.8 27 0.00091 33.1 8.4 55 177-237 38-92 (239)
75 2r8w_A AGR_C_1641P; APC7498, d 61.6 32 0.0011 34.0 9.4 97 186-286 59-166 (332)
76 3e96_A Dihydrodipicolinate syn 61.6 30 0.001 33.9 9.1 95 189-287 40-144 (316)
77 2rfg_A Dihydrodipicolinate syn 60.3 28 0.00097 33.7 8.6 95 189-287 28-133 (297)
78 2v9d_A YAGE; dihydrodipicolini 60.2 27 0.00094 34.6 8.7 98 186-287 56-164 (343)
79 3qfe_A Putative dihydrodipicol 59.2 35 0.0012 33.5 9.1 95 189-286 39-145 (318)
80 2vc6_A MOSA, dihydrodipicolina 59.2 34 0.0012 33.0 8.9 94 189-286 28-132 (292)
81 3hgm_A Universal stress protei 59.0 13 0.00046 30.6 5.3 41 338-379 98-147 (147)
82 3flu_A DHDPS, dihydrodipicolin 58.7 39 0.0013 32.7 9.3 94 189-286 35-139 (297)
83 1o5k_A DHDPS, dihydrodipicolin 58.6 33 0.0011 33.4 8.8 95 189-287 40-145 (306)
84 1jcn_A Inosine monophosphate d 58.4 11 0.00038 39.4 5.7 50 11-60 244-293 (514)
85 2k8i_A SLYD, peptidyl-prolyl C 58.1 43 0.0015 29.8 8.8 59 91-151 51-117 (171)
86 3tak_A DHDPS, dihydrodipicolin 58.0 41 0.0014 32.3 9.3 94 189-286 29-133 (291)
87 2z08_A Universal stress protei 57.5 22 0.00074 29.1 6.4 41 338-379 87-136 (137)
88 3usb_A Inosine-5'-monophosphat 57.4 14 0.00047 38.9 6.2 50 10-59 244-293 (511)
89 4avf_A Inosine-5'-monophosphat 56.4 15 0.0005 38.5 6.1 50 10-59 217-266 (490)
90 2z6i_A Trans-2-enoyl-ACP reduc 56.0 37 0.0013 33.2 8.7 88 189-290 82-172 (332)
91 3r12_A Deoxyribose-phosphate a 55.5 36 0.0012 32.6 8.2 57 177-239 54-110 (260)
92 3d0c_A Dihydrodipicolinate syn 55.3 34 0.0012 33.5 8.3 95 189-287 40-144 (314)
93 3dz1_A Dihydrodipicolinate syn 55.3 55 0.0019 31.8 9.8 92 189-286 36-140 (313)
94 3na8_A Putative dihydrodipicol 55.2 34 0.0012 33.5 8.3 94 189-286 52-156 (315)
95 1ydo_A HMG-COA lyase; TIM-barr 54.0 1.1E+02 0.0037 29.7 11.7 129 178-310 24-165 (307)
96 4fo4_A Inosine 5'-monophosphat 54.0 97 0.0033 31.0 11.6 103 182-290 108-221 (366)
97 2ojp_A DHDPS, dihydrodipicolin 53.7 30 0.001 33.4 7.5 94 189-286 29-133 (292)
98 3ngf_A AP endonuclease, family 53.6 45 0.0015 30.8 8.6 43 180-223 21-63 (269)
99 2v82_A 2-dehydro-3-deoxy-6-pho 53.6 29 0.00099 31.3 7.0 64 189-257 115-181 (212)
100 3cqj_A L-ribulose-5-phosphate 52.6 37 0.0013 31.8 7.9 117 189-310 37-185 (295)
101 1mjh_A Protein (ATP-binding do 52.5 28 0.00096 29.3 6.4 41 338-379 108-157 (162)
102 3ndz_A Endoglucanase D; cellot 52.3 31 0.0011 33.9 7.5 57 19-77 40-106 (345)
103 3tnj_A Universal stress protei 52.3 21 0.00073 29.6 5.5 40 339-379 98-145 (150)
104 1tvn_A Cellulase, endoglucanas 52.2 26 0.00088 33.2 6.7 55 20-76 37-101 (293)
105 1tv5_A Dhodehase, dihydroorota 50.9 33 0.0011 35.4 7.7 102 177-282 306-430 (443)
106 1aj0_A DHPS, dihydropteroate s 50.5 45 0.0015 32.2 8.1 69 9-79 13-102 (282)
107 3h5d_A DHDPS, dihydrodipicolin 50.3 45 0.0015 32.5 8.2 94 189-286 35-140 (311)
108 4af0_A Inosine-5'-monophosphat 50.3 1.1E+02 0.0037 32.5 11.4 114 180-310 279-402 (556)
109 2f6u_A GGGPS, (S)-3-O-geranylg 50.1 25 0.00086 33.1 6.1 65 4-72 2-68 (234)
110 3m9b_A Proteasome-associated A 49.8 44 0.0015 31.9 7.6 28 74-101 117-144 (251)
111 2kfw_A FKBP-type peptidyl-prol 49.7 24 0.00081 32.4 5.7 86 90-180 50-143 (196)
112 1mdl_A Mandelate racemase; iso 49.4 35 0.0012 33.6 7.4 60 10-74 133-196 (359)
113 3gr4_A Pyruvate kinase isozyme 49.3 19 0.00065 38.3 5.5 235 111-378 191-493 (550)
114 2a4a_A Deoxyribose-phosphate a 49.2 1E+02 0.0034 29.8 10.3 60 177-240 43-106 (281)
115 2hmc_A AGR_L_411P, dihydrodipi 49.0 63 0.0022 32.0 9.2 98 186-287 51-158 (344)
116 3nbm_A PTS system, lactose-spe 49.0 11 0.00038 31.2 3.0 65 206-285 19-83 (108)
117 3qc0_A Sugar isomerase; TIM ba 48.6 21 0.00073 32.8 5.4 122 189-312 25-169 (275)
118 3zwt_A Dihydroorotate dehydrog 48.6 44 0.0015 33.5 8.0 101 177-281 229-354 (367)
119 1vrd_A Inosine-5'-monophosphat 48.2 20 0.0007 37.1 5.6 49 12-60 227-275 (494)
120 2ftp_A Hydroxymethylglutaryl-C 48.1 43 0.0015 32.4 7.6 103 178-284 26-141 (302)
121 3a5f_A Dihydrodipicolinate syn 47.9 31 0.001 33.3 6.5 95 189-287 29-134 (291)
122 3cgm_A SLYD, peptidyl-prolyl C 47.5 89 0.003 27.3 9.0 59 91-151 46-113 (158)
123 3bo9_A Putative nitroalkan dio 47.3 72 0.0025 31.1 9.2 89 189-290 96-186 (326)
124 1f76_A Dihydroorotate dehydrog 47.1 28 0.00096 34.0 6.2 74 178-256 221-322 (336)
125 1egz_A Endoglucanase Z, EGZ, C 46.9 26 0.00089 33.1 5.8 53 21-75 38-98 (291)
126 3rcm_A TATD family hydrolase; 46.8 77 0.0026 30.4 9.2 104 182-288 17-135 (287)
127 3s3t_A Nucleotide-binding prot 46.7 34 0.0012 28.1 5.9 41 338-379 95-145 (146)
128 2r91_A 2-keto-3-deoxy-(6-phosp 46.6 1.1E+02 0.0038 29.1 10.4 93 189-286 26-128 (286)
129 2dum_A Hypothetical protein PH 46.5 39 0.0013 28.7 6.4 41 338-379 105-154 (170)
130 3icg_A Endoglucanase D; cellul 46.5 38 0.0013 35.3 7.4 55 21-77 45-109 (515)
131 3fdx_A Putative filament prote 46.5 36 0.0012 27.8 6.0 41 338-379 94-142 (143)
132 2ovl_A Putative racemase; stru 46.4 34 0.0012 33.9 6.8 62 10-74 133-198 (371)
133 2nuw_A 2-keto-3-deoxygluconate 45.9 1E+02 0.0035 29.4 10.0 93 189-286 27-129 (288)
134 1tq8_A Hypothetical protein RV 45.5 35 0.0012 29.2 5.9 40 339-379 108-156 (163)
135 3hqn_D Pyruvate kinase, PK; TI 45.2 29 0.00099 36.5 6.1 234 111-378 140-443 (499)
136 2gdq_A YITF; mandelate racemas 45.0 57 0.0019 32.5 8.2 62 10-74 123-191 (382)
137 3khj_A Inosine-5-monophosphate 45.0 1.2E+02 0.0041 30.1 10.6 99 184-289 107-216 (361)
138 3eb2_A Putative dihydrodipicol 44.4 34 0.0012 33.2 6.2 94 189-286 32-136 (300)
139 3tha_A Tryptophan synthase alp 44.1 71 0.0024 30.4 8.2 107 189-311 110-221 (252)
140 4af0_A Inosine-5'-monophosphat 44.1 20 0.00068 38.1 4.7 50 10-59 269-318 (556)
141 2kr7_A FKBP-type peptidyl-prol 43.9 1.2E+02 0.0042 26.1 9.2 60 91-152 56-123 (151)
142 4dt4_A FKBP-type 16 kDa peptid 43.8 1.1E+02 0.0038 27.2 9.0 59 91-151 74-141 (169)
143 3rmj_A 2-isopropylmalate synth 43.7 2.2E+02 0.0076 28.3 12.3 127 178-311 30-166 (370)
144 3l55_A B-1,4-endoglucanase/cel 43.7 37 0.0013 33.6 6.6 57 18-76 49-113 (353)
145 1jw9_B Molybdopterin biosynthe 43.6 61 0.0021 30.2 7.7 67 210-287 87-153 (249)
146 1vs1_A 3-deoxy-7-phosphoheptul 43.5 47 0.0016 32.0 7.0 68 207-290 88-155 (276)
147 3tml_A 2-dehydro-3-deoxyphosph 43.5 52 0.0018 32.0 7.3 84 191-290 44-141 (288)
148 2dpr_A CON-T(K7GLA); conantoxi 43.4 18 0.0006 21.7 2.4 15 48-62 3-17 (26)
149 3ffs_A Inosine-5-monophosphate 43.4 21 0.0007 36.5 4.6 43 15-59 139-181 (400)
150 2xio_A Putative deoxyribonucle 43.2 49 0.0017 31.6 7.2 103 183-287 28-147 (301)
151 1w3i_A EDA, 2-keto-3-deoxy glu 42.8 1.3E+02 0.0043 28.9 10.0 94 189-287 27-130 (293)
152 1rvk_A Isomerase/lactonizing e 42.8 53 0.0018 32.6 7.6 60 223-292 251-313 (382)
153 3ndo_A Deoxyribose-phosphate a 42.6 61 0.0021 30.4 7.5 54 177-237 24-77 (231)
154 3h8v_A Ubiquitin-like modifier 42.6 70 0.0024 31.0 8.2 67 210-286 91-168 (292)
155 1y8q_A Ubiquitin-like 1 activa 42.5 80 0.0027 31.1 8.8 66 209-286 91-156 (346)
156 3w01_A Heptaprenylglyceryl pho 42.4 2.2E+02 0.0075 26.7 13.3 172 191-415 32-215 (235)
157 3fg9_A Protein of universal st 42.3 31 0.0011 28.9 5.0 41 338-379 106-155 (156)
158 1qpo_A Quinolinate acid phosph 42.3 32 0.0011 33.4 5.6 63 185-253 205-270 (284)
159 3eul_A Possible nitrate/nitrit 42.2 84 0.0029 25.6 7.8 60 344-415 55-119 (152)
160 3gg8_A Pyruvate kinase; malari 42.2 37 0.0013 35.7 6.4 176 180-378 232-459 (511)
161 3t05_A Pyruvate kinase, PK; te 42.0 1.6E+02 0.0055 31.6 11.4 236 111-378 140-442 (606)
162 1ypf_A GMP reductase; GUAC, pu 41.9 21 0.00073 35.1 4.4 71 185-260 161-247 (336)
163 3dlo_A Universal stress protei 41.7 52 0.0018 27.8 6.4 41 338-379 105-154 (155)
164 3usb_A Inosine-5'-monophosphat 41.6 1.3E+02 0.0045 31.3 10.6 106 181-290 255-369 (511)
165 3khd_A Pyruvate kinase; malari 41.3 32 0.0011 36.3 5.7 178 180-378 241-468 (520)
166 1edg_A Endoglucanase A; family 41.2 51 0.0018 32.5 7.1 57 19-77 59-124 (380)
167 3f4w_A Putative hexulose 6 pho 40.9 25 0.00085 31.6 4.4 64 189-254 71-136 (211)
168 1q77_A Hypothetical protein AQ 40.8 24 0.00084 28.8 4.0 41 338-379 97-137 (138)
169 3ffs_A Inosine-5-monophosphate 40.8 84 0.0029 31.9 8.7 99 185-290 147-256 (400)
170 2cw6_A Hydroxymethylglutaryl-C 40.7 53 0.0018 31.6 7.0 129 178-310 23-164 (298)
171 2wqp_A Polysialic acid capsule 40.1 74 0.0025 31.8 8.0 68 207-289 90-157 (349)
172 1yad_A Regulatory protein TENI 40.0 59 0.002 29.4 6.9 53 6-59 12-67 (221)
173 3lmz_A Putative sugar isomeras 40.0 1.1E+02 0.0036 28.0 8.8 110 183-309 31-152 (257)
174 1h5y_A HISF; histidine biosynt 39.9 43 0.0015 30.5 5.9 83 189-283 161-251 (253)
175 1zud_1 Adenylyltransferase THI 39.6 88 0.003 29.2 8.2 68 209-287 83-150 (251)
176 1nu5_A Chloromuconate cycloiso 39.3 49 0.0017 32.7 6.6 46 26-74 149-195 (370)
177 2gm3_A Unknown protein; AT3G01 39.3 41 0.0014 28.7 5.4 40 339-379 113-161 (175)
178 3eod_A Protein HNR; response r 39.2 74 0.0025 25.0 6.7 62 342-415 43-109 (130)
179 1tkk_A Similar to chloromucona 39.2 60 0.0021 31.9 7.3 46 26-74 147-192 (366)
180 3cu2_A Ribulose-5-phosphate 3- 39.1 42 0.0014 31.5 5.8 60 189-251 86-154 (237)
181 1jmv_A USPA, universal stress 38.9 51 0.0017 26.8 5.7 41 338-379 90-136 (141)
182 2d73_A Alpha-glucosidase SUSB; 38.8 1.2E+02 0.004 33.4 9.9 102 180-285 370-506 (738)
183 2nzl_A Hydroxyacid oxidase 1; 38.7 29 0.001 35.1 4.9 67 185-256 264-340 (392)
184 1tzz_A Hypothetical protein L1 38.7 57 0.0019 32.6 7.1 62 10-74 150-217 (392)
185 2y1h_A Putative deoxyribonucle 38.4 69 0.0024 29.6 7.3 105 183-288 21-147 (272)
186 3loq_A Universal stress protei 38.4 1.1E+02 0.0036 28.5 8.6 34 345-379 118-160 (294)
187 2pgw_A Muconate cycloisomerase 38.1 76 0.0026 31.5 7.9 101 179-292 201-303 (384)
188 3hgj_A Chromate reductase; TIM 38.0 49 0.0017 32.7 6.3 73 179-257 236-323 (349)
189 3ayr_A Endoglucanase; TIM barr 38.0 66 0.0023 31.7 7.4 54 21-76 62-125 (376)
190 4avf_A Inosine-5'-monophosphat 37.7 1.2E+02 0.0042 31.3 9.6 104 181-290 228-342 (490)
191 3ctl_A D-allulose-6-phosphate 37.5 62 0.0021 30.2 6.6 60 189-251 74-134 (231)
192 3ovp_A Ribulose-phosphate 3-ep 37.5 66 0.0023 29.8 6.8 87 185-287 21-119 (228)
193 1zzm_A Putative deoxyribonucle 37.4 2E+02 0.007 26.0 10.3 97 189-287 26-134 (259)
194 1zmr_A Phosphoglycerate kinase 37.2 38 0.0013 34.4 5.3 93 24-135 41-140 (387)
195 3stp_A Galactonate dehydratase 37.2 52 0.0018 33.4 6.5 65 10-75 167-238 (412)
196 3ih1_A Methylisocitrate lyase; 37.1 72 0.0025 31.2 7.3 83 210-308 147-236 (305)
197 1vr6_A Phospho-2-dehydro-3-deo 36.9 1E+02 0.0036 30.7 8.5 68 207-290 156-223 (350)
198 2qr6_A IMP dehydrogenase/GMP r 36.9 65 0.0022 32.2 7.2 68 189-260 226-314 (393)
199 3ovp_A Ribulose-phosphate 3-ep 36.8 47 0.0016 30.8 5.7 60 189-251 81-140 (228)
200 4dpp_A DHDPS 2, dihydrodipicol 36.7 79 0.0027 31.7 7.6 92 189-286 87-189 (360)
201 4fxs_A Inosine-5'-monophosphat 36.7 1.4E+02 0.0049 30.9 10.0 104 181-290 230-344 (496)
202 3gg7_A Uncharacterized metallo 36.6 61 0.0021 30.6 6.5 96 183-287 15-125 (254)
203 1geq_A Tryptophan synthase alp 36.5 1.7E+02 0.0058 26.7 9.6 97 186-288 100-199 (248)
204 3r2g_A Inosine 5'-monophosphat 36.5 29 0.001 34.8 4.4 46 15-60 93-138 (361)
205 3dwg_A Cysteine synthase B; su 36.4 1.6E+02 0.0053 28.5 9.7 88 335-440 53-146 (325)
206 3knb_A Titin; IG-like, titin, 36.3 73 0.0025 24.7 6.0 72 88-161 13-89 (100)
207 3g8r_A Probable spore coat pol 35.8 1.2E+02 0.0039 30.4 8.6 45 246-310 112-156 (350)
208 1vzw_A Phosphoribosyl isomeras 35.8 30 0.001 31.9 4.2 68 183-256 33-108 (244)
209 2rdx_A Mandelate racemase/muco 35.7 1.1E+02 0.0038 30.2 8.6 98 179-292 200-299 (379)
210 3dx5_A Uncharacterized protein 35.6 1.5E+02 0.0052 27.2 9.2 117 189-310 22-161 (286)
211 1rpx_A Protein (ribulose-phosp 35.6 1.3E+02 0.0044 27.3 8.5 90 184-287 26-125 (230)
212 1o4u_A Type II quinolic acid p 35.6 25 0.00085 34.2 3.6 64 184-253 203-269 (285)
213 1gox_A (S)-2-hydroxy-acid oxid 35.6 28 0.00095 34.9 4.1 67 185-254 237-311 (370)
214 3bdk_A D-mannonate dehydratase 35.4 28 0.00096 35.2 4.1 85 182-286 31-123 (386)
215 2nli_A Lactate oxidase; flavoe 35.3 34 0.0012 34.3 4.7 65 185-254 241-315 (368)
216 3dzv_A 4-methyl-5-(beta-hydrox 35.2 51 0.0018 31.6 5.8 57 224-290 42-98 (273)
217 3tsm_A IGPS, indole-3-glycerol 35.1 51 0.0018 31.7 5.8 66 183-253 178-250 (272)
218 2aam_A Hypothetical protein TM 35.0 83 0.0028 30.8 7.3 91 189-286 129-246 (309)
219 1h1y_A D-ribulose-5-phosphate 34.9 57 0.0019 29.9 5.9 88 185-287 23-120 (228)
220 1jcn_A Inosine monophosphate d 34.8 2.3E+02 0.008 29.1 11.3 100 183-290 256-368 (514)
221 3bw2_A 2-nitropropane dioxygen 34.8 1.8E+02 0.0063 28.5 10.1 57 189-253 116-174 (369)
222 1xg4_A Probable methylisocitra 34.7 1.2E+02 0.0041 29.4 8.4 107 184-311 170-279 (295)
223 3idf_A USP-like protein; unive 34.6 35 0.0012 27.7 4.0 37 340-379 93-137 (138)
224 2oz8_A MLL7089 protein; struct 34.5 49 0.0017 33.1 5.8 62 10-74 132-197 (389)
225 1j6o_A TATD-related deoxyribon 34.5 1.4E+02 0.0048 27.6 8.7 102 182-287 27-140 (268)
226 3eeg_A 2-isopropylmalate synth 34.4 2E+02 0.0068 28.1 10.1 126 179-311 25-160 (325)
227 1h1n_A Endo type cellulase ENG 34.3 50 0.0017 31.5 5.6 52 23-76 33-94 (305)
228 1gte_A Dihydropyrimidine dehyd 34.2 1.1E+02 0.0036 34.8 9.1 68 181-251 647-734 (1025)
229 1i60_A IOLI protein; beta barr 34.2 2.3E+02 0.0077 25.6 10.1 117 189-310 21-163 (278)
230 3sgz_A Hydroxyacid oxidase 2; 34.2 42 0.0014 33.6 5.1 93 185-282 229-337 (352)
231 1to3_A Putative aldolase YIHT; 34.0 56 0.0019 31.8 5.9 72 189-260 184-262 (304)
232 2qdd_A Mandelate racemase/muco 33.8 70 0.0024 31.7 6.8 60 10-74 134-197 (378)
233 3ipw_A Hydrolase TATD family p 33.8 72 0.0025 31.4 6.7 106 181-287 51-175 (325)
234 1jub_A Dihydroorotate dehydrog 33.8 75 0.0026 30.4 6.8 98 179-281 169-298 (311)
235 3ip3_A Oxidoreductase, putativ 33.7 1.5E+02 0.0052 28.4 9.1 92 193-313 22-116 (337)
236 3fs2_A 2-dehydro-3-deoxyphosph 33.6 65 0.0022 31.5 6.2 83 192-290 69-165 (298)
237 3qja_A IGPS, indole-3-glycerol 33.5 31 0.0011 33.1 3.9 68 184-254 172-244 (272)
238 1dbw_A Transcriptional regulat 33.4 1.5E+02 0.0051 23.0 7.7 61 343-415 40-105 (126)
239 3a24_A Alpha-galactosidase; gl 33.4 1.5E+02 0.005 32.1 9.5 96 180-285 308-423 (641)
240 1wa3_A 2-keto-3-deoxy-6-phosph 33.4 1.3E+02 0.0046 26.5 8.1 86 180-285 20-109 (205)
241 1xi3_A Thiamine phosphate pyro 33.2 1E+02 0.0035 27.3 7.2 44 24-67 29-72 (215)
242 3ceu_A Thiamine phosphate pyro 33.0 74 0.0025 28.8 6.3 71 183-257 97-177 (210)
243 2p8b_A Mandelate racemase/muco 32.8 82 0.0028 31.0 7.1 102 178-292 195-299 (369)
244 4dwd_A Mandelate racemase/muco 32.7 1.4E+02 0.0047 29.9 8.8 63 10-75 125-199 (393)
245 2og9_A Mandelate racemase/muco 32.5 77 0.0026 31.6 6.9 62 10-74 148-214 (393)
246 1nvm_A HOA, 4-hydroxy-2-oxoval 32.4 1.5E+02 0.005 29.1 8.8 122 178-314 26-161 (345)
247 3o63_A Probable thiamine-phosp 32.3 1E+02 0.0034 29.0 7.2 45 24-68 46-99 (243)
248 3b2n_A Uncharacterized protein 32.3 1.3E+02 0.0045 23.7 7.2 59 345-415 44-107 (133)
249 3fij_A LIN1909 protein; 11172J 32.1 1.2E+02 0.0043 28.1 7.9 52 239-290 55-121 (254)
250 2yci_X 5-methyltetrahydrofolat 31.9 77 0.0026 30.3 6.4 49 25-75 38-86 (271)
251 4e7p_A Response regulator; DNA 31.9 99 0.0034 25.1 6.5 62 342-415 58-124 (150)
252 1tqj_A Ribulose-phosphate 3-ep 31.9 1.1E+02 0.0039 28.1 7.5 62 189-253 79-142 (230)
253 2kct_A Cytochrome C-type bioge 31.8 1.5E+02 0.005 23.9 7.1 57 75-132 7-65 (94)
254 1vrd_A Inosine-5'-monophosphat 31.8 58 0.002 33.6 6.0 65 189-257 293-374 (494)
255 3f6p_A Transcriptional regulat 31.7 1.1E+02 0.0037 23.8 6.5 61 342-415 38-103 (120)
256 3nl6_A Thiamine biosynthetic b 31.4 71 0.0024 33.7 6.6 45 24-68 28-72 (540)
257 2cks_A Endoglucanase E-5; carb 31.4 75 0.0026 30.2 6.3 53 22-76 43-102 (306)
258 1xwy_A DNAse TATD, deoxyribonu 31.4 1.9E+02 0.0065 26.3 9.0 101 183-287 20-132 (264)
259 2g0w_A LMO2234 protein; putati 31.3 1.9E+02 0.0064 27.0 9.1 41 183-223 37-83 (296)
260 1rd5_A Tryptophan synthase alp 31.3 99 0.0034 28.8 7.1 93 181-285 32-148 (262)
261 1ypf_A GMP reductase; GUAC, pu 31.2 41 0.0014 33.0 4.5 45 15-59 99-145 (336)
262 3o63_A Probable thiamine-phosp 31.1 53 0.0018 30.9 5.1 72 182-258 143-225 (243)
263 1tt5_A APPBP1, amyloid protein 31.1 63 0.0021 34.1 6.1 68 209-286 87-155 (531)
264 3u3x_A Oxidoreductase; structu 31.0 88 0.003 30.7 6.9 60 235-314 76-138 (361)
265 2jep_A Xyloglucanase; family 5 30.9 55 0.0019 32.4 5.4 53 22-76 70-132 (395)
266 4ew6_A D-galactose-1-dehydroge 30.8 1.1E+02 0.0036 29.7 7.4 58 236-313 69-130 (330)
267 2gjl_A Hypothetical protein PA 30.7 1.3E+02 0.0046 28.9 8.1 91 189-290 90-182 (328)
268 1tmy_A CHEY protein, TMY; chem 30.6 1.4E+02 0.0049 22.8 7.0 58 346-415 43-105 (120)
269 1ka9_F Imidazole glycerol phos 30.6 66 0.0022 29.6 5.6 83 189-283 159-249 (252)
270 2fli_A Ribulose-phosphate 3-ep 30.5 1.3E+02 0.0044 26.8 7.5 60 189-251 78-137 (220)
271 1sjd_A N-acylamino acid racema 30.2 2.3E+02 0.0077 27.7 9.8 100 179-292 194-295 (368)
272 1ivn_A Thioesterase I; hydrola 30.2 65 0.0022 27.7 5.2 42 246-287 63-106 (190)
273 3qja_A IGPS, indole-3-glycerol 30.2 75 0.0026 30.4 6.0 87 184-287 74-169 (272)
274 3g0t_A Putative aminotransfera 30.1 68 0.0023 31.5 6.0 41 22-62 382-435 (437)
275 1vli_A Spore coat polysacchari 30.0 67 0.0023 32.6 5.8 45 246-310 135-179 (385)
276 3f6c_A Positive transcription 29.8 1E+02 0.0036 24.2 6.1 58 346-415 42-104 (134)
277 3mt0_A Uncharacterized protein 29.8 2.5E+02 0.0086 25.8 9.7 40 339-379 78-126 (290)
278 1ece_A Endocellulase E1; glyco 29.7 54 0.0019 31.7 5.1 21 24-44 47-67 (358)
279 3if2_A Aminotransferase; YP_26 29.7 84 0.0029 31.0 6.6 41 22-63 378-439 (444)
280 1v8a_A Hydroxyethylthiazole ki 29.7 55 0.0019 31.0 4.9 57 224-290 40-96 (265)
281 1y0e_A Putative N-acetylmannos 29.6 2.2E+02 0.0075 25.3 9.0 99 185-288 79-183 (223)
282 2c6q_A GMP reductase 2; TIM ba 29.5 1.1E+02 0.0038 30.3 7.3 68 185-257 173-257 (351)
283 3p3b_A Mandelate racemase/muco 29.5 1E+02 0.0036 30.7 7.2 103 178-292 211-315 (392)
284 4ad1_A Glycosyl hydrolase fami 29.4 1.1E+02 0.0039 30.6 7.5 53 17-70 95-153 (380)
285 3nco_A Endoglucanase fncel5A; 29.3 96 0.0033 29.5 6.7 52 23-76 43-104 (320)
286 1viz_A PCRB protein homolog; s 29.2 82 0.0028 29.7 6.0 58 11-72 8-68 (240)
287 3gl9_A Response regulator; bet 29.1 1.8E+02 0.0061 22.6 7.4 62 342-415 38-106 (122)
288 3grc_A Sensor protein, kinase; 28.7 2.1E+02 0.0073 22.5 8.9 62 341-415 41-111 (140)
289 3inp_A D-ribulose-phosphate 3- 28.7 71 0.0024 30.2 5.5 61 189-252 103-163 (246)
290 3tva_A Xylose isomerase domain 28.6 1E+02 0.0035 28.5 6.7 113 189-310 28-173 (290)
291 3olq_A Universal stress protei 28.5 1.6E+02 0.0053 27.5 8.0 41 338-379 99-148 (319)
292 2whl_A Beta-mannanase, baman5; 28.5 62 0.0021 30.6 5.1 52 23-76 33-86 (294)
293 3cny_A Inositol catabolism pro 28.4 1.5E+02 0.0051 27.3 7.8 115 189-310 38-179 (301)
294 1thf_D HISF protein; thermophI 28.3 87 0.003 28.7 6.0 84 189-284 158-249 (253)
295 1vc4_A Indole-3-glycerol phosp 28.2 68 0.0023 30.3 5.3 66 182-252 162-236 (254)
296 4d9a_A 2-pyrone-4,6-dicarbaxyl 28.1 35 0.0012 32.9 3.3 35 10-45 96-130 (303)
297 2ekc_A AQ_1548, tryptophan syn 27.9 1.2E+02 0.0042 28.4 7.1 110 189-312 116-229 (262)
298 2e28_A Pyruvate kinase, PK; al 27.8 3.8E+02 0.013 28.5 11.5 235 111-378 120-423 (587)
299 1eep_A Inosine 5'-monophosphat 27.7 86 0.0029 31.5 6.2 70 184-258 205-291 (404)
300 3pr9_A FKBP-type peptidyl-prol 27.6 1.8E+02 0.006 25.4 7.5 58 90-151 62-126 (157)
301 3u7r_A NADPH-dependent FMN red 27.6 80 0.0027 28.4 5.4 51 232-287 54-111 (190)
302 3pfn_A NAD kinase; structural 27.5 26 0.00089 35.3 2.3 33 347-379 243-279 (365)
303 1vhc_A Putative KHG/KDPG aldol 27.5 2.3E+02 0.0078 26.1 8.7 89 180-286 27-116 (224)
304 2pp0_A L-talarate/galactarate 27.4 1.1E+02 0.0036 30.7 6.8 62 10-74 161-227 (398)
305 3f2b_A DNA-directed DNA polyme 27.4 7.4E+02 0.025 28.3 18.8 122 185-311 135-347 (1041)
306 4dbe_A Orotidine 5'-phosphate 27.3 58 0.002 30.2 4.5 82 189-277 129-212 (222)
307 3g7q_A Valine-pyruvate aminotr 27.3 1E+02 0.0035 29.8 6.7 41 22-63 352-412 (417)
308 3m2t_A Probable dehydrogenase; 27.2 1.1E+02 0.0036 30.0 6.7 58 236-313 57-117 (359)
309 1f76_A Dihydroorotate dehydrog 27.2 2.8E+02 0.0095 26.7 9.8 59 194-252 164-245 (336)
310 1ceo_A Cellulase CELC; glycosy 27.2 83 0.0028 30.2 5.8 22 22-43 29-50 (343)
311 3vnd_A TSA, tryptophan synthas 27.1 1E+02 0.0035 29.4 6.3 93 189-288 117-214 (267)
312 3i4k_A Muconate lactonizing en 27.1 2E+02 0.0068 28.5 8.8 101 178-292 204-307 (383)
313 7a3h_A Endoglucanase; hydrolas 27.1 69 0.0024 30.5 5.2 54 21-76 43-102 (303)
314 3sz8_A 2-dehydro-3-deoxyphosph 27.0 85 0.0029 30.4 5.7 83 192-290 48-144 (285)
315 1p0k_A Isopentenyl-diphosphate 26.9 86 0.0029 30.7 6.0 96 183-282 191-316 (349)
316 1qo2_A Molecule: N-((5-phospho 26.8 61 0.0021 29.7 4.6 72 189-265 151-236 (241)
317 1z41_A YQJM, probable NADH-dep 26.7 92 0.0032 30.4 6.1 86 166-254 213-309 (338)
318 2v03_A Cysteine synthase B; py 26.6 2.2E+02 0.0075 27.0 8.8 45 336-382 42-92 (303)
319 3aof_A Endoglucanase; glycosyl 26.6 92 0.0031 29.4 6.0 21 23-43 35-55 (317)
320 2qjg_A Putative aldolase MJ040 26.5 70 0.0024 29.9 5.0 95 180-285 43-150 (273)
321 3r2g_A Inosine 5'-monophosphat 26.3 2.7E+02 0.0092 27.7 9.5 99 181-290 99-209 (361)
322 3h43_A Proteasome-activating n 26.2 2.3E+02 0.008 22.1 7.4 20 122-141 54-74 (85)
323 3p6l_A Sugar phosphate isomera 26.2 2.5E+02 0.0084 25.4 8.8 85 189-285 29-133 (262)
324 3pzt_A Endoglucanase; alpha/be 26.2 88 0.003 30.4 5.8 54 21-76 68-127 (327)
325 2ovl_A Putative racemase; stru 26.1 2.4E+02 0.0081 27.6 9.1 96 179-286 202-299 (371)
326 1ix5_A FKBP; ppiase, isomerase 26.1 82 0.0028 27.2 5.0 57 91-151 64-127 (151)
327 1h1y_A D-ribulose-5-phosphate 26.0 1.5E+02 0.0051 27.0 7.2 95 189-289 81-182 (228)
328 2qul_A D-tagatose 3-epimerase; 26.0 1.8E+02 0.0061 26.6 7.8 121 189-311 24-175 (290)
329 3ivs_A Homocitrate synthase, m 26.0 3.1E+02 0.011 27.9 10.1 124 178-311 57-189 (423)
330 1o60_A 2-dehydro-3-deoxyphosph 26.0 97 0.0033 30.0 6.0 67 208-290 76-142 (292)
331 2qkf_A 3-deoxy-D-manno-octulos 26.0 1.1E+02 0.0039 29.3 6.5 66 209-290 74-139 (280)
332 3glc_A Aldolase LSRF; TIM barr 25.9 47 0.0016 32.4 3.7 77 189-272 196-277 (295)
333 8abp_A L-arabinose-binding pro 25.7 1.3E+02 0.0043 27.7 6.7 65 212-287 23-89 (306)
334 3kux_A Putative oxidoreductase 25.7 1.4E+02 0.0048 28.9 7.2 60 235-314 55-117 (352)
335 1vcv_A Probable deoxyribose-ph 25.6 56 0.0019 30.6 4.0 67 174-244 120-201 (226)
336 2hqr_A Putative transcriptiona 25.5 1E+02 0.0035 27.0 5.8 61 342-415 36-98 (223)
337 3hp4_A GDSL-esterase; psychrot 25.5 94 0.0032 26.3 5.3 52 236-287 55-110 (185)
338 3sjn_A Mandelate racemase/muco 25.5 1.2E+02 0.004 30.2 6.7 55 223-285 245-301 (374)
339 3aty_A Tcoye, prostaglandin F2 25.3 43 0.0015 33.7 3.4 71 180-257 264-341 (379)
340 3gr7_A NADPH dehydrogenase; fl 25.1 1.2E+02 0.004 29.9 6.5 74 179-257 226-312 (340)
341 3nav_A Tryptophan synthase alp 25.0 1.4E+02 0.0047 28.5 6.9 93 189-288 119-216 (271)
342 2r2n_A Kynurenine/alpha-aminoa 25.0 1.3E+02 0.0046 29.5 7.1 42 22-63 365-423 (425)
343 3ewb_X 2-isopropylmalate synth 25.0 4.5E+02 0.015 25.0 12.4 126 178-310 23-158 (293)
344 3vup_A Beta-1,4-mannanase; TIM 24.8 77 0.0026 29.3 5.0 49 24-74 45-110 (351)
345 2osx_A Endoglycoceramidase II; 24.7 92 0.0031 31.9 5.9 23 21-43 65-88 (481)
346 2tps_A Protein (thiamin phosph 24.6 99 0.0034 27.7 5.6 45 24-68 34-81 (227)
347 3igs_A N-acetylmannosamine-6-p 24.6 1.2E+02 0.0043 28.0 6.3 100 177-291 31-140 (232)
348 1ep3_A Dihydroorotate dehydrog 24.4 1.1E+02 0.0036 29.1 6.0 90 183-282 177-297 (311)
349 3tfx_A Orotidine 5'-phosphate 24.4 88 0.003 29.8 5.3 74 189-269 151-233 (259)
350 2c6q_A GMP reductase 2; TIM ba 24.3 73 0.0025 31.6 4.9 47 13-59 109-157 (351)
351 3cg4_A Response regulator rece 24.3 2.6E+02 0.0089 21.9 8.2 82 342-439 43-131 (142)
352 3q58_A N-acetylmannosamine-6-p 24.2 1.2E+02 0.0043 27.9 6.2 100 177-291 31-140 (229)
353 2qgq_A Protein TM_1862; alpha- 24.1 78 0.0027 30.3 5.0 36 15-50 92-129 (304)
354 4gud_A Imidazole glycerol phos 24.1 85 0.0029 28.0 5.0 68 209-290 14-85 (211)
355 4g9p_A 4-hydroxy-3-methylbut-2 24.0 1.1E+02 0.0037 31.2 6.1 50 23-75 40-89 (406)
356 3hv2_A Response regulator/HD d 24.0 2.8E+02 0.0097 22.3 8.3 61 343-415 51-117 (153)
357 1eye_A DHPS 1, dihydropteroate 24.0 1.9E+02 0.0067 27.6 7.7 68 9-79 4-92 (280)
358 3ele_A Amino transferase; RER0 23.9 87 0.003 30.2 5.3 42 22-64 344-396 (398)
359 1to3_A Putative aldolase YIHT; 23.9 1.4E+02 0.0049 28.8 6.8 55 25-79 112-169 (304)
360 2rdx_A Mandelate racemase/muco 23.9 1.1E+02 0.0038 30.2 6.2 62 10-75 134-197 (379)
361 2gl5_A Putative dehydratase pr 23.9 1.7E+02 0.0056 29.2 7.5 54 224-285 270-325 (410)
362 2b7n_A Probable nicotinate-nuc 23.9 73 0.0025 30.4 4.6 60 189-253 196-258 (273)
363 2nql_A AGR_PAT_674P, isomerase 23.6 1.1E+02 0.0039 30.3 6.2 60 10-74 152-215 (388)
364 3tj4_A Mandelate racemase; eno 23.6 3.5E+02 0.012 26.5 9.9 61 11-74 138-204 (372)
365 3h75_A Periplasmic sugar-bindi 23.5 2.8E+02 0.0096 26.1 8.9 67 210-287 23-93 (350)
366 3l6b_A Serine racemase; pyrido 23.4 3.8E+02 0.013 25.9 10.0 45 336-382 57-107 (346)
367 3fhl_A Putative oxidoreductase 23.3 84 0.0029 30.7 5.1 60 235-314 53-115 (362)
368 2poz_A Putative dehydratase; o 23.3 1.1E+02 0.0038 30.4 6.0 55 224-286 251-307 (392)
369 3n9k_A Glucan 1,3-beta-glucosi 23.3 74 0.0025 32.1 4.8 51 23-75 75-134 (399)
370 1srr_A SPO0F, sporulation resp 23.3 2.1E+02 0.007 22.0 6.7 58 346-415 43-105 (124)
371 2zad_A Muconate cycloisomerase 23.3 1.7E+02 0.0057 28.4 7.3 57 11-74 129-189 (345)
372 2yr1_A 3-dehydroquinate dehydr 23.2 1.9E+02 0.0065 27.2 7.4 72 9-80 138-216 (257)
373 1vcf_A Isopentenyl-diphosphate 23.2 2.3E+02 0.0078 27.4 8.3 91 189-282 199-320 (332)
374 3r0j_A Possible two component 23.2 4E+02 0.014 23.7 9.6 62 342-415 59-125 (250)
375 2y88_A Phosphoribosyl isomeras 23.2 29 0.00099 31.9 1.6 69 183-257 32-108 (244)
376 4e38_A Keto-hydroxyglutarate-a 23.2 3.5E+02 0.012 25.1 9.2 78 197-286 35-112 (232)
377 3afo_A NADH kinase POS5; alpha 23.2 45 0.0015 33.8 3.1 32 348-379 226-261 (388)
378 2qr3_A Two-component system re 23.1 2.6E+02 0.009 21.8 7.5 61 343-415 40-110 (140)
379 3hpd_A Hydroxyethylthiazole ki 23.1 91 0.0031 29.8 5.1 47 235-286 46-92 (265)
380 1rvk_A Isomerase/lactonizing e 23.0 2.1E+02 0.0073 28.0 8.1 10 61-70 113-122 (382)
381 2q02_A Putative cytoplasmic pr 23.0 4.1E+02 0.014 23.8 12.9 36 189-224 26-67 (272)
382 3cis_A Uncharacterized protein 22.9 2.5E+02 0.0086 26.1 8.4 29 350-379 122-159 (309)
383 1xi3_A Thiamine phosphate pyro 22.7 1E+02 0.0036 27.2 5.3 64 190-257 123-195 (215)
384 1sfl_A 3-dehydroquinate dehydr 22.6 1.7E+02 0.0059 27.1 6.9 64 9-72 124-194 (238)
385 3nhm_A Response regulator; pro 22.6 2.7E+02 0.0092 21.5 9.2 61 342-415 39-106 (133)
386 3noy_A 4-hydroxy-3-methylbut-2 22.6 2.8E+02 0.0094 27.8 8.6 90 184-286 49-139 (366)
387 3evn_A Oxidoreductase, GFO/IDH 22.6 1.8E+02 0.0063 27.7 7.4 59 235-313 55-116 (329)
388 1vhk_A Hypothetical protein YQ 22.6 4.2E+02 0.014 25.0 9.8 70 124-200 37-111 (268)
389 1tx2_A DHPS, dihydropteroate s 22.5 3.1E+02 0.011 26.5 8.9 68 9-78 38-126 (297)
390 2ox4_A Putative mandelate race 22.5 1.8E+02 0.0063 28.8 7.6 54 224-285 261-316 (403)
391 3aow_A Putative uncharacterize 22.4 1.2E+02 0.004 30.5 6.1 49 15-63 381-444 (448)
392 3ab8_A Putative uncharacterize 22.4 3.2E+02 0.011 24.6 8.8 31 348-379 107-147 (268)
393 2o56_A Putative mandelate race 22.3 1.9E+02 0.0064 28.8 7.6 54 224-285 267-322 (407)
394 1grj_A GREA protein; transcrip 22.3 2.9E+02 0.01 23.9 8.0 82 56-145 61-156 (158)
395 1h4p_A Glucan 1,3-beta-glucosi 22.3 81 0.0028 31.8 4.8 51 23-75 75-135 (408)
396 3l49_A ABC sugar (ribose) tran 22.2 3.2E+02 0.011 24.6 8.7 31 246-286 62-92 (291)
397 1uuq_A Mannosyl-oligosaccharid 22.2 1.4E+02 0.0049 29.9 6.7 49 25-75 66-132 (440)
398 1rh9_A Endo-beta-mannanase; en 22.0 1.6E+02 0.0056 28.4 7.0 50 24-75 45-106 (373)
399 3hdg_A Uncharacterized protein 22.0 2.4E+02 0.0082 22.0 7.0 59 345-415 46-109 (137)
400 3ajx_A 3-hexulose-6-phosphate 21.9 1.3E+02 0.0046 26.5 5.8 35 189-223 71-105 (207)
401 2ayx_A Sensor kinase protein R 21.9 3.5E+02 0.012 24.5 8.9 57 347-415 170-231 (254)
402 4i6k_A Amidohydrolase family p 21.8 87 0.003 29.6 4.8 60 11-72 96-157 (294)
403 1a04_A Nitrate/nitrite respons 21.8 3.2E+02 0.011 23.5 8.3 61 343-415 44-109 (215)
404 2r14_A Morphinone reductase; H 21.8 73 0.0025 31.9 4.3 69 179-254 252-330 (377)
405 3eez_A Putative mandelate race 21.7 89 0.003 31.1 5.0 99 178-292 199-299 (378)
406 3e9m_A Oxidoreductase, GFO/IDH 21.7 1.3E+02 0.0043 29.0 6.0 59 235-313 55-116 (330)
407 1g01_A Endoglucanase; alpha/be 21.6 1.1E+02 0.0037 30.0 5.5 54 21-76 53-112 (364)
408 3ve9_A Orotidine-5'-phosphate 21.6 44 0.0015 30.9 2.4 82 185-273 118-201 (215)
409 1kgs_A DRRD, DNA binding respo 21.6 3.9E+02 0.013 23.0 11.0 61 343-415 39-104 (225)
410 4gmf_A Yersiniabactin biosynth 21.6 60 0.002 32.4 3.6 61 237-314 58-118 (372)
411 1bqc_A Protein (beta-mannanase 21.5 1.2E+02 0.0042 28.5 5.7 49 25-76 36-87 (302)
412 3v5n_A Oxidoreductase; structu 21.5 1.4E+02 0.0048 29.8 6.5 61 234-314 92-160 (417)
413 3ozy_A Putative mandelate race 21.5 1.5E+02 0.0052 29.5 6.7 54 224-285 248-303 (389)
414 3nnk_A Ureidoglycine-glyoxylat 21.5 1.6E+02 0.0053 28.3 6.7 46 22-67 334-393 (411)
415 3i23_A Oxidoreductase, GFO/IDH 21.5 1E+02 0.0035 29.9 5.3 58 236-313 54-114 (349)
416 2wg5_A General control protein 21.4 3.3E+02 0.011 22.1 7.9 22 121-142 72-94 (109)
417 1kbi_A Cytochrome B2, L-LCR; f 21.4 1.5E+02 0.0051 31.0 6.8 67 185-256 355-436 (511)
418 1y7l_A O-acetylserine sulfhydr 21.4 2.6E+02 0.0087 26.6 8.1 42 337-379 44-91 (316)
419 2eo9_A Roundabout homolog 1; b 21.4 2.2E+02 0.0075 21.9 6.5 71 88-161 16-88 (118)
420 3crn_A Response regulator rece 21.4 2.9E+02 0.01 21.5 7.8 61 343-415 40-105 (132)
421 1rd5_A Tryptophan synthase alp 21.4 1.2E+02 0.004 28.2 5.5 23 23-45 34-56 (262)
422 2yr1_A 3-dehydroquinate dehydr 21.4 4.7E+02 0.016 24.4 9.8 126 170-311 20-165 (257)
423 1vyr_A Pentaerythritol tetrani 21.3 76 0.0026 31.6 4.3 69 179-254 248-325 (364)
424 3cg0_A Response regulator rece 21.3 2.9E+02 0.01 21.5 7.6 59 344-415 48-112 (140)
425 1s2w_A Phosphoenolpyruvate pho 21.2 4.2E+02 0.014 25.5 9.5 55 19-75 24-87 (295)
426 2e6f_A Dihydroorotate dehydrog 21.2 2.1E+02 0.0072 27.2 7.4 99 177-280 169-299 (314)
427 3fst_A 5,10-methylenetetrahydr 21.2 72 0.0025 31.1 4.0 49 181-230 163-211 (304)
428 3rlg_A Sphingomyelin phosphodi 21.1 1.7E+02 0.0058 28.6 6.6 78 3-80 18-121 (302)
429 3rui_A Ubiquitin-like modifier 21.1 2.7E+02 0.0091 27.5 8.2 68 210-287 90-171 (340)
430 3vh1_A Ubiquitin-like modifier 21.1 1.8E+02 0.0062 31.1 7.4 69 209-287 382-464 (598)
431 1nu5_A Chloromuconate cycloiso 21.0 1.5E+02 0.0053 28.9 6.6 100 180-292 200-301 (370)
432 3mz0_A Inositol 2-dehydrogenas 21.0 1.2E+02 0.0041 29.2 5.7 59 235-313 54-115 (344)
433 1ujp_A Tryptophan synthase alp 21.0 97 0.0033 29.5 4.8 105 189-307 113-220 (271)
434 3vav_A 3-methyl-2-oxobutanoate 21.0 3.9E+02 0.013 25.6 9.1 158 178-379 33-214 (275)
435 3ldv_A Orotidine 5'-phosphate 21.0 68 0.0023 30.5 3.7 76 189-272 169-254 (255)
436 3jug_A Beta-mannanase; TIM-bar 20.9 85 0.0029 31.0 4.5 51 25-77 58-110 (345)
437 3apt_A Methylenetetrahydrofola 20.9 61 0.0021 31.6 3.4 62 181-243 160-221 (310)
438 1vpz_A Carbon storage regulato 20.8 88 0.003 24.1 3.6 29 122-153 16-44 (73)
439 2zyj_A Alpha-aminodipate amino 20.8 1.7E+02 0.0057 28.2 6.7 42 22-63 336-392 (397)
440 3toy_A Mandelate racemase/muco 20.8 3.7E+02 0.013 26.6 9.3 62 9-75 155-221 (383)
441 4hty_A Cellulase; (alpha/beta) 20.6 1.2E+02 0.0043 29.5 5.7 54 21-76 85-143 (359)
442 3ru6_A Orotidine 5'-phosphate 20.4 83 0.0028 30.8 4.2 68 189-264 165-242 (303)
443 3mil_A Isoamyl acetate-hydroly 20.4 97 0.0033 27.3 4.5 53 235-287 59-120 (240)
444 2pln_A HP1043, response regula 20.4 2.6E+02 0.009 21.8 6.9 58 345-415 57-116 (137)
445 1k77_A EC1530, hypothetical pr 20.4 3.2E+02 0.011 24.4 8.2 33 189-222 22-54 (260)
446 4gsl_A Ubiquitin-like modifier 20.3 1.9E+02 0.0066 31.0 7.4 69 209-287 381-463 (615)
447 1vky_A S-adenosylmethionine:tR 20.3 1.6E+02 0.0054 29.4 6.2 55 115-170 53-122 (347)
448 3isl_A Purine catabolism prote 20.2 1.5E+02 0.0051 28.5 6.2 45 22-66 334-392 (416)
449 1vjz_A Endoglucanase; TM1752, 20.2 1.4E+02 0.0048 28.6 5.9 53 21-75 36-98 (341)
450 2z0t_A Putative uncharacterize 20.1 70 0.0024 26.5 3.1 30 115-145 26-55 (109)
451 2bti_A Carbon storage regulato 20.0 97 0.0033 23.2 3.6 27 124-153 8-34 (63)
No 1
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=2.8e-128 Score=1022.06 Aligned_cols=442 Identities=46% Similarity=0.712 Sum_probs=408.9
Q ss_pred CCCCCCCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHH-HcCCceEEEecCCCCeeEe
Q 012335 3 GDHQNSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMN-NTGILCAVMLDTKGPEIRT 81 (466)
Q Consensus 3 ~~~~~~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~-~~~~~i~i~~Dl~GpkiR~ 81 (466)
+++.+.|||||||||||+|+++++|++|+++||||||||||||++++|.++++++|++++ ++|+||+||+||+||||||
T Consensus 38 ~~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaIl~Dl~GPkIR~ 117 (526)
T 4drs_A 38 DNDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPHSTVGIMLDTKGPEIRT 117 (526)
T ss_dssp ----CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTTCCCEEEEECCCSCCBB
T ss_pred cCCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEECCCCeeEE
Confidence 345678999999999999999999999999999999999999999999999999999987 6899999999999999999
Q ss_pred eecCCCCcEEecCCCEEEEEeCCCCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEe
Q 012335 82 GFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVL 161 (466)
Q Consensus 82 g~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l 161 (466)
|.++++++++|++||+|+|+.+....|+++.++++|++|++++++||.||+|||+|.|+|++++ ++.+.|+|.+||.|
T Consensus 118 g~~~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~--~~~i~~~V~~gG~L 195 (526)
T 4drs_A 118 GMLEGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIG--DDFIVCKVLNSVTI 195 (526)
T ss_dssp CCBSTTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEC--SSEEEEECCSCCEE
T ss_pred EecCCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEEEe--CCeEEEEeccCccc
Confidence 9998877899999999999998777889999999999999999999999999999999999995 78999999999999
Q ss_pred cCCCccccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCC-------CceEEEeecCHH
Q 012335 162 GERKNVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAK-------NILLMSKVENLE 234 (466)
Q Consensus 162 ~~~Kgvnlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~-------~~~IiaKIE~~~ 234 (466)
+++||||+|+..+++|+|||||.+|+.+||+++|+|||++||||+++||.++|++|++.|. +++||||||+++
T Consensus 196 ~~~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~ 275 (526)
T 4drs_A 196 GERKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLE 275 (526)
T ss_dssp CSSCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHH
T ss_pred cccccccCCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccH
Confidence 9999999999999999999999998328999999999999999999999999999998763 689999999999
Q ss_pred HHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh----
Q 012335 235 GVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA---- 310 (466)
Q Consensus 235 av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na---- 310 (466)
|++|||||+++||||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++|||||
T Consensus 276 av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DG 355 (526)
T 4drs_A 276 GVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDG 355 (526)
T ss_dssp HHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -------hhhhccchh----------------------hHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCc
Q 012335 311 -------AENFINYGD----------------------LFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGG 361 (466)
Q Consensus 311 -------aE~~~~~~~----------------------~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG 361 (466)
+|++.+.|| +++.+....+.+.+..+++|.+|+++|++++|++||+||.||
T Consensus 356 aDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~sG 435 (526)
T 4drs_A 356 SDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVNAKLIITITETG 435 (526)
T ss_dssp CSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhccCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence 566665544 344444445566788999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCCCCCCCCccCHHHHHHHHHHHHHHcCC
Q 012335 362 TTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGL 441 (466)
Q Consensus 362 ~ta~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G~ 441 (466)
+||+++|||||.|||||+ | ++++++|||+|+|||+|++++.. .+.|++++.|+++++++|+
T Consensus 436 ~tA~~iSr~RP~~pI~a~-------T------~~~~~~r~l~L~wGV~p~~~~~~------~~~d~~i~~a~~~~~~~g~ 496 (526)
T 4drs_A 436 NTARLISKYRPSQTIIAC-------T------AKPEVARGLKIARGVKTYVLNSI------HHSEVVISNALALAKEESL 496 (526)
T ss_dssp HHHHHHHHTCCSSEEEEE-------E------SCHHHHHHGGGSTTEEEEECSCC------CCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHhhCCCCCEEEE-------C------CCHHHHHhhhccCCeEEEEeCCC------CCHHHHHHHHHHHHHHCCC
Confidence 999999999999999999 4 99999999999999999999763 7889999999999999999
Q ss_pred CCCCCEEEEEEec-----CCCcEEEEEEc
Q 012335 442 CRPGDSVVALHRM-----HVASVLKILAV 465 (466)
Q Consensus 442 ~~~GD~VVvv~g~-----g~tn~irI~~v 465 (466)
+++||.||+++|+ |+||+|||++|
T Consensus 497 ~~~GD~vVi~~G~p~g~~G~TN~lrv~~V 525 (526)
T 4drs_A 497 IESGDFAIAVHGVKESCPGSCNLMKIVRC 525 (526)
T ss_dssp CCTTCEEEEEC----------CCEEEEEC
T ss_pred CCCcCEEEEEeccCCCCCCcceEEEEEEC
Confidence 9999999999998 89999999987
No 2
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=2.6e-127 Score=1015.25 Aligned_cols=445 Identities=44% Similarity=0.713 Sum_probs=417.6
Q ss_pred CCCCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHH------cCCceEEEecCCCCee
Q 012335 6 QNSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNN------TGILCAVMLDTKGPEI 79 (466)
Q Consensus 6 ~~~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~------~~~~i~i~~Dl~Gpki 79 (466)
.+.|||||||||||+|+++|+|++|+++||||||||||||++|+|.++++++|+++++ +|+|++||+|||||||
T Consensus 59 ~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~~~~~~~~~~~~~vaIllDlkGPkI 138 (550)
T 3gr4_A 59 ITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEI 138 (550)
T ss_dssp CSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTTTTCTTTCCCCEEEEECCCSCC
T ss_pred ccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhhccccccCceEEEEEeCCCCEE
Confidence 3679999999999999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred EeeecCCC--CcEEecCCCEEEEEeCC--CCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEE
Q 012335 80 RTGFLKDG--KPIQLVQGQEITISTDY--SLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRC 155 (466)
Q Consensus 80 R~g~~~~~--~~i~l~~G~~v~l~~~~--~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v 155 (466)
|+|.++++ .+++|++||+|+|+.+. ...|+.+.++++|++|++++++||.||+|||+|.|+|++++ ++.+.|+|
T Consensus 139 R~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~--~~~v~~~V 216 (550)
T 3gr4_A 139 RTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKG--ADFLVTEV 216 (550)
T ss_dssp BBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEC--SSEEEEEE
T ss_pred EEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEe--CCEEEEEE
Confidence 99999753 47999999999999873 34788999999999999999999999999999999999984 77999999
Q ss_pred eeCeEecCCCccccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHH
Q 012335 156 ENSAVLGERKNVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEG 235 (466)
Q Consensus 156 ~~gG~l~~~Kgvnlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~a 235 (466)
++||.|+++||||+||..+++|+|||||++|| +|++++|+|||++||||+++||.++|++|++.|.++.||||||+++|
T Consensus 217 ~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl-~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~~ea 295 (550)
T 3gr4_A 217 ENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEG 295 (550)
T ss_dssp EECEEECSSCBEECTTSCCCCCSSCHHHHHHH-HHHHHTTCSEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHH
T ss_pred EeCcEEcCCceeecCCCccCCCCCCHHHHHHH-HHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCCHHH
Confidence 99999999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh-----
Q 012335 236 VANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA----- 310 (466)
Q Consensus 236 v~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na----- 310 (466)
|+|+|||++++|||||||||||+|+|++++|.+||+|+.+|+++|||||+||||||||++||+|||||++|||||
T Consensus 296 v~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~ 375 (550)
T 3gr4_A 296 VRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGA 375 (550)
T ss_dssp HHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ------hhhhccchh----------------------hHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCch
Q 012335 311 ------AENFINYGD----------------------LFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGT 362 (466)
Q Consensus 311 ------aE~~~~~~~----------------------~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ 362 (466)
+|++.+.|| +|..+....+.+.+..+++|.+|+++|++++|++||+||.||+
T Consensus 376 DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~ 455 (550)
T 3gr4_A 376 DCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGR 455 (550)
T ss_dssp SEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHTTCSCEEEECSSSH
T ss_pred cEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhhhccCCCCChHHHHHHHHHHHHHhcCCCEEEEECCCcH
Confidence 566665544 2333322234556788999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCCCCCCCCccCHHHHHHHHHHHHHHcCCC
Q 012335 363 TAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLC 442 (466)
Q Consensus 363 ta~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G~~ 442 (466)
||+++|||||.|||||+ | ++++++|||+|+|||+|++++....+.|.++.|+++++|+++++++|++
T Consensus 456 TA~~iSr~RP~~PIia~-------T------~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~ 522 (550)
T 3gr4_A 456 SAHQVARYRPRAPIIAV-------T------RNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFF 522 (550)
T ss_dssp HHHHHHTTCCSSCEEEE-------E------SCHHHHHHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHhhCCCCCEEEE-------c------CCHHHHHHHhccCCeEEEEecccccccccCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999 4 9999999999999999999987666678888999999999999999999
Q ss_pred CCCCEEEEEEec----CCCcEEEEEEcC
Q 012335 443 RPGDSVVALHRM----HVASVLKILAVN 466 (466)
Q Consensus 443 ~~GD~VVvv~g~----g~tn~irI~~v~ 466 (466)
++||.||+++|+ |+||+|||+.|.
T Consensus 523 ~~GD~vVv~~G~~~g~G~TN~lrv~~v~ 550 (550)
T 3gr4_A 523 KKGDVVIVLTGWRPGSGFTNTMRVVPVP 550 (550)
T ss_dssp CTTCEEEEEEESSSSTTCEEEEEEEECC
T ss_pred CCcCEEEEEeCCCCCCCCCeEEEEEEcC
Confidence 999999999998 899999999873
No 3
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.3e-128 Score=1013.42 Aligned_cols=438 Identities=47% Similarity=0.750 Sum_probs=400.6
Q ss_pred CCCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHH-HcCCceEEEecCCCCeeEeeecC
Q 012335 7 NSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMN-NTGILCAVMLDTKGPEIRTGFLK 85 (466)
Q Consensus 7 ~~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~-~~~~~i~i~~Dl~GpkiR~g~~~ 85 (466)
..|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++ ++|+|++||+||||||||+|.++
T Consensus 44 ~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~~~vaIllDl~GPkIR~G~~~ 123 (520)
T 3khd_A 44 RSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPNCLLGMLLDTKGPEIRTGFLK 123 (520)
T ss_dssp GGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSSCCCEEEEECCCCCEEBCEEC
T ss_pred cCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEeCCCCeEEeeccC
Confidence 56899999999999999999999999999999999999999999999999999999 89999999999999999999998
Q ss_pred CCCcEEecCCCEEEEEeCCCCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEecCCC
Q 012335 86 DGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERK 165 (466)
Q Consensus 86 ~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~K 165 (466)
++ .++|++||+++|+.++...|+.+.++++|++|++++++||.||+|||+|.|+|++++ ++.+.|+|++||.|+++|
T Consensus 124 ~~-~~~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~--~~~v~~~V~~gG~L~~~K 200 (520)
T 3khd_A 124 NK-EVHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETH--EDHVITEVLNSAVIGERK 200 (520)
T ss_dssp ------------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEEC--SSCEEEEECC-CCCCSSC
T ss_pred CC-CeEecCCCEEEEecCCCcCCCccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEEEE--CCEEEEEEEeCeEEeCCc
Confidence 64 469999999999998667789999999999999999999999999999999999994 778999999999999999
Q ss_pred ccccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc
Q 012335 166 NVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN 245 (466)
Q Consensus 166 gvnlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~ 245 (466)
|||+||..+++|+|||||++||.+|++++|+|||++||||+++||.++|++|++.|.++.||||||+++||+|+|||+++
T Consensus 201 gvNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~ 280 (520)
T 3khd_A 201 NMNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAE 280 (520)
T ss_dssp EEECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHH
T ss_pred eeecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHh
Confidence 99999999999999999999995699999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh-----------hhhh
Q 012335 246 SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA-----------AENF 314 (466)
Q Consensus 246 sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na-----------aE~~ 314 (466)
+|||||||||||+|+|+++||.+||+||.+|+++|||||+||||||||++||+|||||++||||| +|++
T Consensus 281 sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA 360 (520)
T 3khd_A 281 SDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETA 360 (520)
T ss_dssp SSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHH
T ss_pred CCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 6776
Q ss_pred ccchh----------------------hHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCC
Q 012335 315 INYGD----------------------LFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRP 372 (466)
Q Consensus 315 ~~~~~----------------------~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk~RP 372 (466)
.+.|| .|.......+.+.+..+++|.+|+++|++++|++|++||.||+||+++|||||
T Consensus 361 ~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~vSr~RP 440 (520)
T 3khd_A 361 GGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARSAVETAESIQASLIIALTETGYTARLIAKYKP 440 (520)
T ss_dssp SCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCC
T ss_pred CCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhcCC
Confidence 66554 23222222334567889999999999999999999999999999999999999
Q ss_pred CCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEE
Q 012335 373 SMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALH 452 (466)
Q Consensus 373 ~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G~~~~GD~VVvv~ 452 (466)
.|||||+ | ++++++|||+|+|||+|++++.. .+.|++++.|++++++.|++++||.||+++
T Consensus 441 ~~PIia~-------T------~~~~~~r~l~L~~GV~p~~~~~~------~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~ 501 (520)
T 3khd_A 441 SCTILAL-------S------ASDSTVKCLNVHRGVTCIKVGSF------QGTDIVIRNAIEIAKQRNMAKVGDSVIAIH 501 (520)
T ss_dssp SSEEEEE-------E------SCHHHHHHGGGSTTEEEEECCSC------CCHHHHHHHHHHHHHHTTSSCTTCEEEEEE
T ss_pred CCCEEEE-------c------CCHHHHHHHhccCCeEEEEeCCC------CCHHHHHHHHHHHHHHCCCCCCcCEEEEEe
Confidence 9999999 4 99999999999999999998763 678999999999999999999999999999
Q ss_pred ec-----CCCcEEEEEEcC
Q 012335 453 RM-----HVASVLKILAVN 466 (466)
Q Consensus 453 g~-----g~tn~irI~~v~ 466 (466)
|+ |+||+|||+.||
T Consensus 502 G~~~g~~G~TN~lrv~~v~ 520 (520)
T 3khd_A 502 GIKEEVSGGTNLMKVVQIE 520 (520)
T ss_dssp C-CCSSTTCEEEEEEEECC
T ss_pred CccCCCCCCCeEEEEEEeC
Confidence 98 899999999885
No 4
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=1.3e-126 Score=1003.99 Aligned_cols=439 Identities=48% Similarity=0.785 Sum_probs=408.5
Q ss_pred CCCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHc-CCceEEEecCCCCeeEeeecC
Q 012335 7 NSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNT-GILCAVMLDTKGPEIRTGFLK 85 (466)
Q Consensus 7 ~~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~-~~~i~i~~Dl~GpkiR~g~~~ 85 (466)
+.|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++++ |+|++||+||||||||+|.++
T Consensus 34 ~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaIl~Dl~GPkIR~g~~~ 113 (511)
T 3gg8_A 34 TAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPEARLAILLDTKGPEIRTGFLK 113 (511)
T ss_dssp TTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTTCCCEEEEECCCCCCBBCC--
T ss_pred ccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEECCCCEEecccCC
Confidence 5699999999999999999999999999999999999999999999999999999998 999999999999999999998
Q ss_pred CCCcEEecCCCEEEEEeCCCCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEecCCC
Q 012335 86 DGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERK 165 (466)
Q Consensus 86 ~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~K 165 (466)
++++++|++||+|+|+.++...|+.+.++++|++|++++++||.||+|||+|.|+|++++ ++.+.|+|.+||.|+++|
T Consensus 114 ~~~~v~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~--~~~i~~~V~~gG~L~~~K 191 (511)
T 3gg8_A 114 DHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVG--SDYVITQAQNTATIGERK 191 (511)
T ss_dssp ---CEEECTTCEEEEESCTTCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEC--SSEEEEEESSCEEECSSC
T ss_pred CCCCEEEccCCEEEEEECCCCCCCCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEEEe--CCEEEEEEEeCeEEcCCc
Confidence 655799999999999998667899999999999999999999999999999999999994 789999999999999999
Q ss_pred ccccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc
Q 012335 166 NVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN 245 (466)
Q Consensus 166 gvnlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~ 245 (466)
|||+||..+++|+|||||++||.+|++++|+|||++||||+++||.++|++|++.|.+++||||||+++|++|+|||+++
T Consensus 192 gvNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~ 271 (511)
T 3gg8_A 192 NMNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAE 271 (511)
T ss_dssp BEECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHH
T ss_pred ceecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHh
Confidence 99999999999999999999995599999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh-----------hhhh
Q 012335 246 SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA-----------AENF 314 (466)
Q Consensus 246 sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na-----------aE~~ 314 (466)
+|||||||||||+|+|+|+||.+||+|+.+|+++|||||+||||||||++||+|||||++||||| +|++
T Consensus 272 sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA 351 (511)
T 3gg8_A 272 ADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETA 351 (511)
T ss_dssp CSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHH
T ss_pred CCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 6777
Q ss_pred ccchh----------------------hHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCC
Q 012335 315 INYGD----------------------LFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRP 372 (466)
Q Consensus 315 ~~~~~----------------------~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk~RP 372 (466)
.+.|| .|+......+.+.+..+++|.+|+++|++++|++|++||.||+||+++|||||
T Consensus 352 ~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~iSr~RP 431 (511)
T 3gg8_A 352 NGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQEAVARAAVETAECVNAAIILALTETGQTARLIAKYRP 431 (511)
T ss_dssp TCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhCC
Confidence 66554 22222222334567789999999999999999999999999999999999999
Q ss_pred CCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEE
Q 012335 373 SMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALH 452 (466)
Q Consensus 373 ~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G~~~~GD~VVvv~ 452 (466)
.|||||+ | ++++++|||+|+|||+|++++.. .+.|++++.|+++++++|++++||.||+++
T Consensus 432 ~~PIia~-------T------~~~~~~r~l~L~~GV~p~~~~~~------~~~d~~~~~a~~~~~~~g~~~~GD~vVi~~ 492 (511)
T 3gg8_A 432 MQPILAL-------S------ASESTIKHLQVIRGVTTMQVPSF------QGTDHVIRNAIVVAKERELVTEGESIVAVH 492 (511)
T ss_dssp SSCEEEE-------E------SCHHHHHHGGGSTTEEEEECCC--------CHHHHHHHHHHHHHHTTSCCTTCEEEEEE
T ss_pred CCCEEEE-------c------CCHHHHHHhhccCCeEEEEeCCC------CCHHHHHHHHHHHHHHCCCCCCcCEEEEEe
Confidence 9999999 4 99999999999999999998763 678999999999999999999999999999
Q ss_pred ec-----CCCcEEEEEEcC
Q 012335 453 RM-----HVASVLKILAVN 466 (466)
Q Consensus 453 g~-----g~tn~irI~~v~ 466 (466)
|+ |+||+|||+.|+
T Consensus 493 G~~~g~~G~TN~lrv~~v~ 511 (511)
T 3gg8_A 493 GMKEEVAGSSNLLKVLTVE 511 (511)
T ss_dssp EC------CCEEEEEEECC
T ss_pred CccCCCCCCCeEEEEEEcC
Confidence 98 899999999875
No 5
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=2.8e-127 Score=1007.75 Aligned_cols=443 Identities=41% Similarity=0.665 Sum_probs=409.4
Q ss_pred CCCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeeEeeecCC
Q 012335 7 NSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKD 86 (466)
Q Consensus 7 ~~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~GpkiR~g~~~~ 86 (466)
..|||||||||||+|+++|+|++|+++||||||||||||++|+|.++++++|++++++|+|++||+||||||||+|.+++
T Consensus 18 ~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g~~vaIl~Dl~GPkIR~g~~~~ 97 (499)
T 3hqn_D 18 NYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTGQFVG 97 (499)
T ss_dssp SSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBBCCBGG
T ss_pred cCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCcEEEEEeCCCCEEeeeccCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCcEEecCCCEEEEEeCC--CCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEecCC
Q 012335 87 GKPIQLVQGQEITISTDY--SLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGER 164 (466)
Q Consensus 87 ~~~i~l~~G~~v~l~~~~--~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~ 164 (466)
+.++ |++||+|+|+.+. ...|+.+.++++|++|++++++||.||+|||+|.|+|++++. ++.+.|+|.+||.|+++
T Consensus 98 ~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~-~~~i~~~v~~gG~L~~~ 175 (499)
T 3hqn_D 98 GDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHED-EQTLECTVTNSHTISDR 175 (499)
T ss_dssp GEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEEE-TTEEEEEECSCEEEETT
T ss_pred CCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEcC-CCeEEEEEEeCcEeeCC
Confidence 5468 9999999999873 457889999999999999999999999999999999999952 56799999999999999
Q ss_pred CccccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHh
Q 012335 165 KNVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLA 244 (466)
Q Consensus 165 Kgvnlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~ 244 (466)
||||+||..+++|+|||||++|| +|++++|+|||++||||+++||.++|++|.+.|.++.||||||+++||+|+|||++
T Consensus 176 KgvNlPg~~~~lp~ltekD~~dl-~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~ 254 (499)
T 3hqn_D 176 RGVNLPGCDVDLPAVSAKDRVDL-QFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIE 254 (499)
T ss_dssp CBEECTTSCCCCCSSCHHHHHHH-HHHHHTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHH
T ss_pred CceecCCCCCCCCCCCHHHHHHH-HHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999998899999999999999999999999
Q ss_pred cCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh-----------hhh
Q 012335 245 NSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA-----------AEN 313 (466)
Q Consensus 245 ~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na-----------aE~ 313 (466)
++|||||||||||+|+|+++||.+||+|+.+|+++|||||+||||||||++||+|||||++||||| +|+
T Consensus 255 ~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSgET 334 (499)
T 3hqn_D 255 ESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGET 334 (499)
T ss_dssp HSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHHH
T ss_pred hCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEeccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999 666
Q ss_pred hccchh----------------------hHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcC
Q 012335 314 FINYGD----------------------LFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYR 371 (466)
Q Consensus 314 ~~~~~~----------------------~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk~R 371 (466)
+.+.|| .|.......+.+.+..+++|.+|+++|++++|++|++||.||+||+++||||
T Consensus 335 A~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~isr~R 414 (499)
T 3hqn_D 335 AKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVAKYR 414 (499)
T ss_dssp HTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTC
T ss_pred cCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhhC
Confidence 666544 2332222334456788999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEE
Q 012335 372 PSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVAL 451 (466)
Q Consensus 372 P~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G~~~~GD~VVvv 451 (466)
|.|||||+ | ++++++|||+|+|||+|++++...... .++.|++++.|++++++.|++++||.||++
T Consensus 415 P~~pIia~-------T------~~~~~~r~l~L~~GV~p~~~~~~~~~~-~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~ 480 (499)
T 3hqn_D 415 PNCPIVCV-------T------TRLQTCRQLNITQGVESVFFDADKLGH-DEGKEHRVAAGVEFAKSKGYVQTGDYCVVI 480 (499)
T ss_dssp CSSCEEEE-------E------SCHHHHHHGGGSTTEEEEECCHHHHCC-CTTCHHHHHHHHHHHHHTTSCCTTCEEEEE
T ss_pred CCCCEEEE-------c------CCHHHHHHhhccCCeEEEEeccccccc-cCCHHHHHHHHHHHHHHcCCCCCcCEEEEE
Confidence 99999999 4 999999999999999999987531111 246789999999999999999999999999
Q ss_pred Eec----CCCcEEEEEEcC
Q 012335 452 HRM----HVASVLKILAVN 466 (466)
Q Consensus 452 ~g~----g~tn~irI~~v~ 466 (466)
+|+ |+||+|||+.|.
T Consensus 481 ~G~~~~~G~TN~~rv~~v~ 499 (499)
T 3hqn_D 481 HADHKVKGYANQTRILLVE 499 (499)
T ss_dssp EECC-----CEEEEEEECC
T ss_pred eCCCCCCCCCeEEEEEEcC
Confidence 998 999999999873
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=4.7e-124 Score=1003.61 Aligned_cols=438 Identities=43% Similarity=0.649 Sum_probs=410.0
Q ss_pred CCCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeeEeeecCC
Q 012335 7 NSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKD 86 (466)
Q Consensus 7 ~~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~GpkiR~g~~~~ 86 (466)
+.|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++|+|++||+||||||||||.+++
T Consensus 21 ~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~vail~Dl~GPkiR~g~~~~ 100 (606)
T 3t05_A 21 MMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKD 100 (606)
T ss_dssp -CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCBBCCBTT
T ss_pred cccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCEEEeecCCC
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred CCcEEecCCCEEEEEeCCCCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEecCCCc
Q 012335 87 GKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKN 166 (466)
Q Consensus 87 ~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~Kg 166 (466)
.+++|++||+++|+.+. ..|+.+.++++|++|++++++||+||+|||+|.|+|++++.+++.+.|+|.+||.|+++||
T Consensus 101 -~~i~L~~G~~~~lt~~~-~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~v~~~V~~gG~L~~~Kg 178 (606)
T 3t05_A 101 -GIIELERGNEVIVSMNE-VEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKKG 178 (606)
T ss_dssp -SEEECCSSCEEEEESSC-CCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTTTEEEEEECSCCEEETTCB
T ss_pred -CCEEEcCCCEEEEEecC-cCCCCCEEEeccHHHHHhcCCCCEEEEeCCeEEEEEEEEEecCCEEEEEEEECeEEeCCce
Confidence 57999999999999874 5788899999999999999999999999999999995544468899999999999999999
Q ss_pred cccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcC
Q 012335 167 VNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANS 246 (466)
Q Consensus 167 vnlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~s 246 (466)
||+|+..+++|+|||||++|| +|++++|+|||++||||+++||.++|++|.+.|.+++||||||+++|++|+|||++++
T Consensus 179 vNlPg~~~~lp~ltekD~~dl-~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~s 257 (606)
T 3t05_A 179 VNLPGVRVSLPGITEKDAEDI-RFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVS 257 (606)
T ss_dssp EECSSSCCCCCSSCHHHHHHH-HHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHHC
T ss_pred EECCCCccCCCCCChhHHHHH-HHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHhC
Confidence 999999999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh-----------hhhhc
Q 012335 247 DAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA-----------AENFI 315 (466)
Q Consensus 247 DgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na-----------aE~~~ 315 (466)
|||||||||||+|+|+|+||.+||+|+++|+++|||||+||||||||++||+|||||++||||| +|++.
T Consensus 258 DGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~ 337 (606)
T 3t05_A 258 DGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAA 337 (606)
T ss_dssp SCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHS
T ss_pred CEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 67777
Q ss_pred cchhh-----HHHHHhh---------------CCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCC
Q 012335 316 NYGDL-----FKKIMET---------------APVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMP 375 (466)
Q Consensus 316 ~~~~~-----~~~~~~~---------------~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk~RP~~P 375 (466)
+.||. +.++... ...+.+..+++|.+|+++|++++|++|++||.||+||+++|||||.||
T Consensus 338 G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~p 417 (606)
T 3t05_A 338 GLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSD 417 (606)
T ss_dssp CSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSE
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhccccCCCHHHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHhhCCCCC
Confidence 76552 2221110 012456789999999999999999999999999999999999999999
Q ss_pred EEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEEec-
Q 012335 376 ILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRM- 454 (466)
Q Consensus 376 IiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G~~~~GD~VVvv~g~- 454 (466)
|||+ | ++++++|||+|+|||+|++++.. .+.|+++++|+++++++|++++||.||+++|+
T Consensus 418 Iia~-------t------~~~~~~r~l~L~~GV~p~~~~~~------~~~~~~~~~a~~~~~~~g~~~~GD~vVi~~G~p 478 (606)
T 3t05_A 418 IIAV-------T------PSEETARQCSIVWGVQPVVKKGR------KSTDALLNNAVATAVETGRVTNGDLIIITAGVP 478 (606)
T ss_dssp EEEE-------E------SCHHHHHHHHTSSSEEEEECCCC------SSHHHHHHHHHHHHHHTTSCCTTCEEEEEECSS
T ss_pred EEEE-------c------CCHHHHHhhhccCCeEEEEeCCC------CCHHHHHHHHHHHHHHcCCCCCCCEEEEEeCcc
Confidence 9999 4 99999999999999999998763 67899999999999999999999999999997
Q ss_pred ----CCCcEEEEEEcC
Q 012335 455 ----HVASVLKILAVN 466 (466)
Q Consensus 455 ----g~tn~irI~~v~ 466 (466)
|+||+|||+.|.
T Consensus 479 ~g~~g~tN~~~v~~v~ 494 (606)
T 3t05_A 479 TGETGTTNMMKIHLVG 494 (606)
T ss_dssp TTTCSSCCEEEEEECC
T ss_pred CCCCCCccceEEEEec
Confidence 899999999874
No 7
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=4.7e-123 Score=972.95 Aligned_cols=435 Identities=44% Similarity=0.668 Sum_probs=393.8
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeeEeeecCCCC
Q 012335 9 PKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKDGK 88 (466)
Q Consensus 9 r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~GpkiR~g~~~~~~ 88 (466)
|||||||||||+|+++++|++|+++||||||||||||++++|+++++++|++++++|+|++||+||||||||+|.+++++
T Consensus 2 r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~~~v~il~Dl~GPkiR~g~~~~~~ 81 (470)
T 1e0t_A 2 KKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGN 81 (470)
T ss_dssp CCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCEEBCCBGGGC
T ss_pred CcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCceEEEEeCCCCEEEEEecCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999998335
Q ss_pred cEEecCCCEEEEEeCCCCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEecCCCccc
Q 012335 89 PIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVN 168 (466)
Q Consensus 89 ~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~Kgvn 168 (466)
+++|++||+++|+.+....|+++.++++|++|++++++||.||+|||+|.|+|++++ ++.+.|+|.+||.|+++||||
T Consensus 82 ~v~L~~G~~~~lt~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~--~~~i~~~v~~gG~L~~~KgvN 159 (470)
T 1e0t_A 82 DVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIE--GNKVICKVLNNGDLGENKGVN 159 (470)
T ss_dssp CEEECTTCEEEEESCTTCCBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEE--TTEEEEEECSCEEECSSCEEE
T ss_pred ceEEecCCEEEEEeCCccCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEe--CCeEEEEEecCcEEeCCceee
Confidence 799999999999997445788899999999999999999999999999999999995 789999999999999999999
Q ss_pred cCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhc-CCCceEEEeecCHHHHhcHHHHHhcCC
Q 012335 169 LPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVH-AKNILLMSKVENLEGVANFDDVLANSD 247 (466)
Q Consensus 169 lp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~-~~~~~IiaKIE~~~av~nideI~~~sD 247 (466)
+||..+++|+|||+|.+|| +|++++|+|+|++|||++++|+++++++|.+. |.++.||||||+++|++|+|||++++|
T Consensus 160 lPg~~~~lp~ltekD~~Di-~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sD 238 (470)
T 1e0t_A 160 LPGVSIALPALAEKDKQDL-IFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASD 238 (470)
T ss_dssp CSSCCCCCCSSCHHHHHHH-HHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSS
T ss_pred cCCCcCCCCCCCcCCHHHH-HHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCC
Confidence 9999999999999999999 89999999999999999999999999999998 889999999999999999999999999
Q ss_pred eeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh-----------hhhhcc
Q 012335 248 AFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA-----------AENFIN 316 (466)
Q Consensus 248 gImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na-----------aE~~~~ 316 (466)
||||||||||+|+|.+++|.+||+|+.+|+++|||||+||||||||++||+|||||++||||| +|++.+
T Consensus 239 gImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G 318 (470)
T 1e0t_A 239 GIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKG 318 (470)
T ss_dssp EEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC----
T ss_pred EEEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999 788888
Q ss_pred chhh-----HHHHHhh----CC---------CCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEE
Q 012335 317 YGDL-----FKKIMET----AP---------VPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILS 378 (466)
Q Consensus 317 ~~~~-----~~~~~~~----~~---------~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk~RP~~PIiA 378 (466)
.||. +.++... .. .+.+..+++|.+|+++|++++|++|++||.||+||+++|||||.|||||
T Consensus 319 ~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pI~a 398 (470)
T 1e0t_A 319 KYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILA 398 (470)
T ss_dssp --CHHHHHHHHHHHHHHHTTCCCCCC---------CHHHHHHHHHHHHHHTTCSBEEEECSSSHHHHHHHTTCCSSBEEE
T ss_pred CCHHHHHHHHHHHHHHHHhhhhhhHHHhhhccccchHHHHHHHHHHHHHhcCCCEEEEECCChhHHHHHHhhCCCCCEEE
Confidence 7763 2332221 00 0123478999999999999999999999999999999999999999999
Q ss_pred EEeccccccccccccCChhhhhhhcCccCcEEEEcCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEEec----
Q 012335 379 VIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRM---- 454 (466)
Q Consensus 379 v~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G~~~~GD~VVvv~g~---- 454 (466)
+ | ++++++|||+|+|||+|++++.. .+.|++++.++++++++|++++||.||+++|+
T Consensus 399 ~-------t------~~~~~~r~l~l~~GV~p~~~~~~------~~~~~~~~~a~~~~~~~g~~~~GD~vvv~~g~~~~~ 459 (470)
T 1e0t_A 399 L-------T------TNEKTAHQLVLSKGVVPQLVKEI------TSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPS 459 (470)
T ss_dssp E-------E------SCHHHHHHGGGSTTEEEEECSCC------CSHHHHHHHHHHHHHHTSSSCTTCEEEEEECSSSCT
T ss_pred E-------C------CCHHHHHHhhhhccceEEEecCC------CCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCCCCCC
Confidence 9 4 99999999999999999998753 67899999999999999999999999999986
Q ss_pred CCCcEEEEEEc
Q 012335 455 HVASVLKILAV 465 (466)
Q Consensus 455 g~tn~irI~~v 465 (466)
|+||+|||+.+
T Consensus 460 g~tn~~~v~~v 470 (470)
T 1e0t_A 460 GTTNTASVHVL 470 (470)
T ss_dssp TCCCEEEEEEC
T ss_pred CccceEEEEEC
Confidence 89999999875
No 8
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=5e-121 Score=950.08 Aligned_cols=420 Identities=28% Similarity=0.382 Sum_probs=396.4
Q ss_pred CCCCeEEEEecCCCCCCHH--HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeeEeeec
Q 012335 7 NSPKTKIVCTLGPASRSVE--MAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFL 84 (466)
Q Consensus 7 ~~r~tkIi~TiGp~~~~~~--~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~GpkiR~g~~ 84 (466)
+.|||||||||||+|+++| +|++|+++ |||||||||||++|+|+++++++|++++++|+|++||+||||||||+|.+
T Consensus 13 ~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g~~vaIl~Dl~GPkIR~g~~ 91 (461)
T 3qtg_A 13 ARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKNRPLAVIVDLKGPSIRVGST 91 (461)
T ss_dssp CSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBCCBC
T ss_pred ccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCceEEEEeCCCCEEEECCC
Confidence 4689999999999999998 99999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEecCCCEEEEEeCCCCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEecCC
Q 012335 85 KDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGER 164 (466)
Q Consensus 85 ~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~ 164 (466)
+ +++|++||+++|+.+.. .++ +.++++|++|++++++||.||+|||+|.|+|++++ ++.+.|+|++||.|+++
T Consensus 92 ~---~v~L~~G~~~~lt~~~~-~~~-~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~--~~~v~~~V~~gG~L~~~ 164 (461)
T 3qtg_A 92 S---PINVQEGEVVKFKLSDK-SDG-TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNTG--SDWIEAVAESSGVITGG 164 (461)
T ss_dssp S---CEEECTTCEEEEEECSB-CCS-SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEEC--SSEEEEEESSCEEECTT
T ss_pred C---CEEEeCCCEEEEEecCC-CCC-cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEEE--CCEEEEEEEECCEecCC
Confidence 5 39999999999998743 344 78999999999999999999999999999999984 78999999999999999
Q ss_pred CccccCCcccCCCCCChhcHHHHHh--ccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHH
Q 012335 165 KNVNLPGVIVDLPTLTEKDKEDILN--WGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDV 242 (466)
Q Consensus 165 Kgvnlp~~~~~lp~lte~D~~di~~--~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI 242 (466)
||||+||..+++|+|||||++|| + |++++|+|||++||||+++||.++|++|++.|.+++||||||+++||+|+|||
T Consensus 165 KgvNlPg~~~~lp~lTekD~~dl-~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeI 243 (461)
T 3qtg_A 165 KAIVVEGKDYDISTPAEEDVEAL-KAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEEL 243 (461)
T ss_dssp CBEEETTCCCCCCSSCHHHHHHH-HHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHH
T ss_pred CceecCCCCCCCCCCCHHHHHHH-HHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHH
Confidence 99999999999999999999999 9 99999999999999999999999999999999899999999999999999999
Q ss_pred HhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh-----------h
Q 012335 243 LANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA-----------A 311 (466)
Q Consensus 243 ~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na-----------a 311 (466)
++++|||||||||||+|+|+++||.+||+|+.+|+++|||||+||||||||++||+|||||++||||| +
T Consensus 244 l~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSg 323 (461)
T 3qtg_A 244 VQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTN 323 (461)
T ss_dssp HHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECH
T ss_pred HHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred hhhccchhh-----HHHHHhhC-------CCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEE
Q 012335 312 ENFINYGDL-----FKKIMETA-------PVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 312 E~~~~~~~~-----~~~~~~~~-------~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk~RP~~PIiAv 379 (466)
|++.+.||. +.++.... +.+.+..+++|.+|+++|++++|+ |++||.||+||+++|||||.|||||+
T Consensus 324 ETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~aia~aa~~~a~~~~a~-Iv~~T~SG~tA~~vsr~RP~~pIia~ 402 (461)
T 3qtg_A 324 ETASGKYPLAAVSWLSRILMNVEYQIPQSPLLQNSRDRFAKGLVELAQDLGAN-ILVFSMSGTLARRIAKFRPRGVVYVG 402 (461)
T ss_dssp HHHTSSCHHHHHHHHHHHHHTCCCCCCCCCCCCSHHHHHHHHHHHHHHHHTCE-EEEECSSSHHHHHHHTTCCSSCEEEE
T ss_pred cccCCCCHHHHHHHHHHHHHHHHhhhhhccCCCCHHHHHHHHHHHHHHhcCCC-EEEECCCcHHHHHHHhhCCCCCEEEe
Confidence 999998873 55554432 234567899999999999999999 99999999999999999999999999
Q ss_pred EeccccccccccccCChhhhhhhcCccCcEEEEcCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEEec-CCCc
Q 012335 380 IVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRM-HVAS 458 (466)
Q Consensus 380 ~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G~~~~GD~VVvv~g~-g~tn 458 (466)
| ++++++|||+|+|||+|++++ . .+.|++++.+++++++.| ||+++|. |+||
T Consensus 403 -------T------~~~~~~r~l~l~~GV~p~~~~-~------~~~d~~~~~a~~~~~~~g-------vvit~g~p~~TN 455 (461)
T 3qtg_A 403 -------T------PNVRVARSLSIVWALEPLYIP-A------ENYEEGLEKLISLKGTTP-------FVATYGIRGGVH 455 (461)
T ss_dssp -------E------SCHHHHHHHTTSTTEEEEECC-C------SSHHHHHHHHHHHHCCSS-------EEEEECCTTSCC
T ss_pred -------C------CCHHHHhhceeccceEEEEeC-C------CCHHHHHHHHHHHHHHCC-------EEEEeccCCCCe
Confidence 4 999999999999999999987 2 678999999999999988 8888888 9999
Q ss_pred EEEEE
Q 012335 459 VLKIL 463 (466)
Q Consensus 459 ~irI~ 463 (466)
+|||+
T Consensus 456 ~~~v~ 460 (461)
T 3qtg_A 456 SVKVK 460 (461)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99996
No 9
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=3.2e-120 Score=976.45 Aligned_cols=436 Identities=43% Similarity=0.655 Sum_probs=407.8
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeeEeeecCCC
Q 012335 8 SPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKDG 87 (466)
Q Consensus 8 ~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~GpkiR~g~~~~~ 87 (466)
.|||||||||||+|+++++|++|+++||||||||||||++++|+++++++|++++++|+|++||+||||||||||.+++
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~~~v~il~Dl~GPkiR~g~~~~- 80 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMEN- 80 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCBBCCCTT-
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCceEEEEeCCCCEEEEeccCC-
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CcEEecCCCEEEEEeCCCCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEecCCCcc
Q 012335 88 KPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNV 167 (466)
Q Consensus 88 ~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~Kgv 167 (466)
++++|++||+++|+.+. ..|+++.++++|++|++++++||.||+|||+|.|+|++++.+++.+.|+|++||.|+++|||
T Consensus 81 ~~i~l~~G~~~~l~~~~-~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~Kgv 159 (587)
T 2e28_A 81 GAIELKEGSKLVISMSE-VLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGV 159 (587)
T ss_dssp SCBCCCSSCEEEEESSC-CCCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCBE
T ss_pred CcEEEecCCEEEEEecC-cCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeEEEEEecCCEEcCCcee
Confidence 47999999999999874 56888999999999999999999999999999999999965678999999999999999999
Q ss_pred ccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCC-CceEEEeecCHHHHhcHHHHHhcC
Q 012335 168 NLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAK-NILLMSKVENLEGVANFDDVLANS 246 (466)
Q Consensus 168 nlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~-~~~IiaKIE~~~av~nideI~~~s 246 (466)
|+||..+++|+|||+|.+|| +|++++|+|+|++|||++++|++++++++.+.|. ++.||||||+++|++|+|||++++
T Consensus 160 nlPg~~~~lp~ltekD~~di-~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~ 238 (587)
T 2e28_A 160 NVPGVKVNLPGITEKDRADI-LFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAA 238 (587)
T ss_dssp ECTTSCCCCCSCCHHHHHHH-HHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHS
T ss_pred ecCCCcCCCCCCCcccHHHH-HHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhC
Confidence 99999999999999999999 8999999999999999999999999999999884 899999999999999999999999
Q ss_pred CeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh-----------hhhhc
Q 012335 247 DAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA-----------AENFI 315 (466)
Q Consensus 247 DgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na-----------aE~~~ 315 (466)
|||||||||||+|+|+|++|.+||+|+++|+++|||||+||||||||++||+|||||++||||| +|++.
T Consensus 239 DgImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~ 318 (587)
T 2e28_A 239 DGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAA 318 (587)
T ss_dssp SEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHT
T ss_pred CEEEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 68777
Q ss_pred cchhh-----HHHHHh---------------hCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCC
Q 012335 316 NYGDL-----FKKIME---------------TAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMP 375 (466)
Q Consensus 316 ~~~~~-----~~~~~~---------------~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk~RP~~P 375 (466)
+.||. +.++.. ....+.+..+++|.+|+++|++++|++|++||.||+||+++|||||.||
T Consensus 319 G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~Rp~~p 398 (587)
T 2e28_A 319 GQYPVEAVKTMHQIALRTEQALEHRDILSQRTKESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAP 398 (587)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSC
T ss_pred CCCHHHHHHHHHHHHHHHhhhhhhhhHhhhhhcccccchHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhcCCCCC
Confidence 76552 111110 0112235689999999999999999999999999999999999999999
Q ss_pred EEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEEec-
Q 012335 376 ILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRM- 454 (466)
Q Consensus 376 IiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G~~~~GD~VVvv~g~- 454 (466)
|||+ | ++++++|||+|+|||+|++++.. .+.+++++.+++++++.||+++||.|++++|.
T Consensus 399 I~a~-------t------~~~~~~r~l~l~~GV~p~~~~~~------~~~~~~~~~a~~~~~~~G~~k~GD~VVItqG~P 459 (587)
T 2e28_A 399 IIAV-------T------SNEAVSRRLALVWGVYTKEAPHV------NTTDEMLDVAVDAAVRSGLVKHGDLVVITAGVP 459 (587)
T ss_dssp EEEE-------E------SSHHHHHHGGGSTTEEEEECCCC------CSHHHHHHHHHHHHHHHTCCCTTCEEEEEECSS
T ss_pred EEEE-------C------CCHHHHHHHHHhcCceEEecccc------CCHHHHHHHHHHHHHhCCcccccceEEEecCcc
Confidence 9999 4 99999999999999999998753 67899999999999999999999999999986
Q ss_pred ----CCCcEEEEEEc
Q 012335 455 ----HVASVLKILAV 465 (466)
Q Consensus 455 ----g~tn~irI~~v 465 (466)
|.||++|+..+
T Consensus 460 ~g~~G~TN~LkI~~V 474 (587)
T 2e28_A 460 VGETGSTNLMKVHVI 474 (587)
T ss_dssp CSSCCCCCEEEEEEC
T ss_pred cCcCCCCceEEEEEE
Confidence 78999999765
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=2.2e-120 Score=959.91 Aligned_cols=445 Identities=38% Similarity=0.611 Sum_probs=411.9
Q ss_pred CCCCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcC-CceEEEecCCCCeeEeeec
Q 012335 6 QNSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTG-ILCAVMLDTKGPEIRTGFL 84 (466)
Q Consensus 6 ~~~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~-~~i~i~~Dl~GpkiR~g~~ 84 (466)
++.|||||||||||+|+++++|++|+++||||||||||||++++|+++++++|++++++| +|++||+||||||||||.+
T Consensus 16 ~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~~~~~~v~il~Dl~GPkiR~g~~ 95 (500)
T 1a3w_A 16 SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTT 95 (500)
T ss_dssp CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHHCCSSCCCCEEECCCSCCBBCCC
T ss_pred ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEeCCCCEEEEeec
Confidence 456899999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCcEEecCCCEEEEEeCCC--CCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEec
Q 012335 85 KDGKPIQLVQGQEITISTDYS--LKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLG 162 (466)
Q Consensus 85 ~~~~~i~l~~G~~v~l~~~~~--~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~ 162 (466)
+++++++|++||+++|+.+.. ..|+.+.++++|++|++++++||.||+|||+|.|+|++++ +++.+.|+|++||.|+
T Consensus 96 ~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~-~~~~v~~~v~~gG~L~ 174 (500)
T 1a3w_A 96 TNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVV-DDKTLKVKALNAGKIC 174 (500)
T ss_dssp SSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEECCBCC-C--CEEEEBCSCCCCC
T ss_pred CCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEEEEEEEc-cCCeEEEEEecCCEEe
Confidence 875579999999999998742 4688899999999999999999999999999999999883 3678999999999999
Q ss_pred CCCccccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHH
Q 012335 163 ERKNVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDV 242 (466)
Q Consensus 163 ~~Kgvnlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI 242 (466)
++||||+||..+++|+||++|.+|| +|+++.|+|+|++|||++++|++++++++.+.|.++.||||||+++|++|++||
T Consensus 175 ~~KgvNlPg~~~~lp~lt~~D~~DI-~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI 253 (500)
T 1a3w_A 175 SHKGVNLPGTDVDLPALSEKDKEDL-RFGVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEI 253 (500)
T ss_dssp SSCBEECTTCCCCCCSSCHHHHHHH-HHHHHHTCSEEEECSCCSHHHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHH
T ss_pred CCCCCcCCCCccCCCCCChhHHHHH-HHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHH
Confidence 9999999999999999999999999 899999999999999999999999999999888899999999999999999999
Q ss_pred HhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh-----------h
Q 012335 243 LANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA-----------A 311 (466)
Q Consensus 243 ~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na-----------a 311 (466)
++++|||||||||||+|+|.++++.+||+|+.+|+++|||+|+||||||||+.+|.|||||++|++|+ +
T Consensus 254 ~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~ 333 (500)
T 1a3w_A 254 LKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSG 333 (500)
T ss_dssp HHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBST
T ss_pred HHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 4
Q ss_pred hhhccchh----------------------hHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHh
Q 012335 312 ENFINYGD----------------------LFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSK 369 (466)
Q Consensus 312 E~~~~~~~----------------------~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk 369 (466)
|++.+.|| .+.......+.+.+..+++|.+|+++|++++|++|++||.||+||+++||
T Consensus 334 eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr 413 (500)
T 1a3w_A 334 ETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSK 413 (500)
T ss_dssp TTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHTCSCEEEECSSSHHHHHHHH
T ss_pred hhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhccccccchHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHh
Confidence 55555444 12211110122345689999999999999999999999999999999999
Q ss_pred cCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEE
Q 012335 370 YRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVV 449 (466)
Q Consensus 370 ~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G~~~~GD~VV 449 (466)
|||.|||||+ | ++++++|||+|+|||+|++++......|.++.|++++.++++++++|++++||.||
T Consensus 414 ~RP~~pI~a~-------t------~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv 480 (500)
T 1a3w_A 414 YRPNCPIILV-------T------RCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGILKKGDTYV 480 (500)
T ss_dssp TCCSSCEEEE-------E------SCTTHHHHGGGSTTEEEEECCSCCCSCTTTHHHHHHHHHHHHHHHTTCSCTTCEEE
T ss_pred hCCCCCEEEE-------c------CCHHHHHhhhhhCCeEEEEecccccccccCCHHHHHHHHHHHHHHCCCCCCcCEEE
Confidence 9999999999 4 89999999999999999999875556777889999999999999999999999999
Q ss_pred EEEec----CCCcEEEEEEc
Q 012335 450 ALHRM----HVASVLKILAV 465 (466)
Q Consensus 450 vv~g~----g~tn~irI~~v 465 (466)
+++|+ |+||+|||+.|
T Consensus 481 v~~g~~~~~g~tn~~~v~~v 500 (500)
T 1a3w_A 481 SIQGFKAGAGHSNTLQVSTV 500 (500)
T ss_dssp EEECCCTTTCCCCEEEEEEC
T ss_pred EEecccCCCCCCceEEEEEC
Confidence 99997 89999999875
No 11
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.57 E-value=1.1e-15 Score=150.59 Aligned_cols=101 Identities=17% Similarity=0.215 Sum_probs=89.5
Q ss_pred HHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHh---------------------------cCCCceEEEeecCHHHH
Q 012335 184 KEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRV---------------------------HAKNILLMSKVENLEGV 236 (466)
Q Consensus 184 ~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~---------------------------~~~~~~IiaKIE~~~av 236 (466)
..+| +++++.|+|+|++|||+|++|++++.+.+.. .+.++.|+++|||++|+
T Consensus 80 ~~~i-~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av 158 (267)
T 2vws_A 80 KPLI-KQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTAL 158 (267)
T ss_dssp HHHH-HHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHH
T ss_pred HHHH-HHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHH
Confidence 3577 6778999999999999999999999887631 11247899999999999
Q ss_pred hcHHHHHhc--CCeeEEeCCcccCcCCc------hhHHHHHHHHHHHHHHcCCCeEE
Q 012335 237 ANFDDVLAN--SDAFMVARGDLGMEIPI------EKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 237 ~nideI~~~--sDgImiaRgDLg~e~~~------e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
+|+++|++. .|+++||++||+.+++. +.+..++++++.+|+++|||+++
T Consensus 159 ~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v 215 (267)
T 2vws_A 159 DNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGF 215 (267)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEE
Confidence 999999987 89999999999999986 67899999999999999999986
No 12
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.55 E-value=3e-15 Score=148.80 Aligned_cols=102 Identities=16% Similarity=0.214 Sum_probs=89.4
Q ss_pred cHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHh---------------------------cCCCceEEEeecCHHH
Q 012335 183 DKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRV---------------------------HAKNILLMSKVENLEG 235 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~---------------------------~~~~~~IiaKIE~~~a 235 (466)
|..+| +++++.|+++|++|||+|++|++++.+.+.. .+.++.|+++|||++|
T Consensus 100 d~~di-~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~a 178 (287)
T 2v5j_A 100 DPVQI-KQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREA 178 (287)
T ss_dssp CHHHH-HHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHH
T ss_pred CHHHH-HHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHH
Confidence 34477 7788999999999999999999999876531 1224789999999999
Q ss_pred HhcHHHHHhc--CCeeEEeCCcccCcCCc------hhHHHHHHHHHHHHHHcCCCeEE
Q 012335 236 VANFDDVLAN--SDAFMVARGDLGMEIPI------EKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 236 v~nideI~~~--sDgImiaRgDLg~e~~~------e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
++|+++|+++ .|+++||++||+.+++. +.+..++++++.+|+++|||+++
T Consensus 179 v~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv 236 (287)
T 2v5j_A 179 MKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGI 236 (287)
T ss_dssp HHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEE
Confidence 9999999975 79999999999999986 67899999999999999999976
No 13
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.54 E-value=8.6e-15 Score=145.17 Aligned_cols=103 Identities=13% Similarity=0.206 Sum_probs=95.3
Q ss_pred hhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHh--cCCeeEEeCCcccC
Q 012335 181 EKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLA--NSDAFMVARGDLGM 258 (466)
Q Consensus 181 e~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~--~sDgImiaRgDLg~ 258 (466)
+++..|| +.+++ |+|+|++|||+|++|++.+++++...|.++.++++|||++|+.|+++|+. ..|+++||++||+.
T Consensus 81 ~~~~~dl-~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~ 158 (284)
T 1sgj_A 81 PYFEDDL-SVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYTT 158 (284)
T ss_dssp TTHHHHG-GGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHH
T ss_pred HhHHHHH-HHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHHHH
Confidence 5688899 88899 99999999999999999999999877778999999999999999999996 37999999999999
Q ss_pred cCCc------hhHHHHHHHHHHHHHHcCCCeEE
Q 012335 259 EIPI------EKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 259 e~~~------e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
+++. +.+..++++++.+|+++|||+|.
T Consensus 159 ~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~ 191 (284)
T 1sgj_A 159 DLGGKRTPGGLEVLYARSQVALAARLTGVAALD 191 (284)
T ss_dssp HHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEE
T ss_pred HhCCCCCCChHHHHHHHHHHHHHHHHcCCCeee
Confidence 9987 67999999999999999999853
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.52 E-value=1.2e-14 Score=142.64 Aligned_cols=102 Identities=20% Similarity=0.272 Sum_probs=90.5
Q ss_pred HHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHH---------------------------hcCCCceEEEeecCHHHHh
Q 012335 185 EDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLR---------------------------VHAKNILLMSKVENLEGVA 237 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~---------------------------~~~~~~~IiaKIE~~~av~ 237 (466)
.|| +++++.|+|+|++|||+|++|++++.+.+. ..+.++.++++|||++|+.
T Consensus 79 ~di-~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~ 157 (261)
T 3qz6_A 79 AHV-QRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVE 157 (261)
T ss_dssp HHH-HHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHH
T ss_pred HHH-HHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHH
Confidence 477 778899999999999999999999988773 1235689999999999999
Q ss_pred cHHHHHhc--CCeeEEeCCcccCcCCc------hhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 238 NFDDVLAN--SDAFMVARGDLGMEIPI------EKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 238 nideI~~~--sDgImiaRgDLg~e~~~------e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
|+++|+++ .|+++||++||+.+++. +.+..++++++.+|+++|||+.+.+
T Consensus 158 ~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~ 215 (261)
T 3qz6_A 158 DIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFT 215 (261)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 99999954 79999999999999986 4799999999999999999998753
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.52 E-value=1.6e-14 Score=141.28 Aligned_cols=101 Identities=22% Similarity=0.262 Sum_probs=89.7
Q ss_pred HHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHh--------------------------cCCCceEEEeecCHHHHh
Q 012335 184 KEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRV--------------------------HAKNILLMSKVENLEGVA 237 (466)
Q Consensus 184 ~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~--------------------------~~~~~~IiaKIE~~~av~ 237 (466)
-..| +.+++.|+++|++|||+|++|++.+.+.+.. .+.++.++++|||++|+.
T Consensus 81 ~~~i-~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~ 159 (256)
T 1dxe_A 81 PVII-KRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVD 159 (256)
T ss_dssp HHHH-HHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHH
T ss_pred HHHH-HHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHH
Confidence 3447 6778899999999999999999999887741 235789999999999999
Q ss_pred cHHHHHhc--CCeeEEeCCcccCcCCc------hhHHHHHHHHHHHHHHcCCCeEE
Q 012335 238 NFDDVLAN--SDAFMVARGDLGMEIPI------EKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 238 nideI~~~--sDgImiaRgDLg~e~~~------e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
|+++|++. .|+++||++||+.+++. +.+..++++++.+|+++|||+++
T Consensus 160 ~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v 215 (256)
T 1dxe_A 160 NVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGI 215 (256)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred hHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEE
Confidence 99999984 89999999999999986 57999999999999999999986
No 16
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.49 E-value=2e-14 Score=145.87 Aligned_cols=102 Identities=16% Similarity=0.248 Sum_probs=90.3
Q ss_pred HHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhc--------------------------------CCCceEEEeecC
Q 012335 185 EDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVH--------------------------------AKNILLMSKVEN 232 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~--------------------------------~~~~~IiaKIE~ 232 (466)
.+| +++++.|+++|++|||+|++|++++++++... +.++.|+++|||
T Consensus 108 ~di-~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt 186 (339)
T 1izc_A 108 VSL-STALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIES 186 (339)
T ss_dssp HHH-HHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECS
T ss_pred HHH-HHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEECh
Confidence 477 67788999999999999999999999988531 124789999999
Q ss_pred HHHHhcHHHHHhc--CCeeEEeCCcccCc--------CCc---hhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 233 LEGVANFDDVLAN--SDAFMVARGDLGME--------IPI---EKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 233 ~~av~nideI~~~--sDgImiaRgDLg~e--------~~~---e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
++|++|+++|+++ .|+++||++||+.+ ++. +.+..++++++.+|+++|||++..+
T Consensus 187 ~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~ 254 (339)
T 1izc_A 187 VKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA 254 (339)
T ss_dssp HHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec
Confidence 9999999999975 89999999999999 886 7899999999999999999997644
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.15 E-value=3.4e-11 Score=121.52 Aligned_cols=113 Identities=18% Similarity=0.178 Sum_probs=96.8
Q ss_pred CCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHh-------cC----CCceEEEeecCHHHHhcHHHHHh
Q 012335 176 LPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRV-------HA----KNILLMSKVENLEGVANFDDVLA 244 (466)
Q Consensus 176 lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~-------~~----~~~~IiaKIE~~~av~nideI~~ 244 (466)
-|.+.+.|.+.| ..+.+.|.+.|++|+|+|++++..+++++.. .| .++.++++||++.|+.|+++|++
T Consensus 117 ~p~~~~~ql~Ai-~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~ 195 (324)
T 2xz9_A 117 RPDIFKTQLRAI-LRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAK 195 (324)
T ss_dssp CHHHHHHHHHHH-HHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTT
T ss_pred chhhHHHHHHHH-HHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHH
Confidence 456677788888 6788899999999999999999999888752 23 36899999999999999999999
Q ss_pred cCCeeEEeCCcccC-cCC---------------chhHHHHHHHHHHHHHHcCCCeEEeehh
Q 012335 245 NSDAFMVARGDLGM-EIP---------------IEKIFLAQKVMIHKANIQGKPVVTATQM 289 (466)
Q Consensus 245 ~sDgImiaRgDLg~-e~~---------------~e~v~~~qk~ii~~~~~~gkPvi~ATqm 289 (466)
..|++.||..||.. .++ .+.|..+.++++.+|+++|||+.+++++
T Consensus 196 ~vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~ 256 (324)
T 2xz9_A 196 EVDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEM 256 (324)
T ss_dssp TCSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGG
T ss_pred hCcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCcc
Confidence 99999999999984 333 2567888899999999999999988774
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.01 E-value=2.5e-10 Score=114.77 Aligned_cols=105 Identities=18% Similarity=0.307 Sum_probs=89.0
Q ss_pred ChhcHHHHHhccCcCC--CcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc---CCeeEEeCC
Q 012335 180 TEKDKEDILNWGVPNK--IDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN---SDAFMVARG 254 (466)
Q Consensus 180 te~D~~di~~~~~~~~--~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~---sDgImiaRg 254 (466)
|++..+|| +..++.| +|+|.+|+|++++|+..+.+.+...+.++.+++.|||++|+.|+++|+++ .|++++|..
T Consensus 113 t~~~~~Dl-~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~ 191 (316)
T 3qll_A 113 TRAGIEDI-HALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAA 191 (316)
T ss_dssp SHHHHHHH-HHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHH
T ss_pred CchhHHHH-HHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHH
Confidence 35555677 5666776 49999999999999999999987766788999999999999999999984 479999999
Q ss_pred cccCcCCc----hhHHHHHHHHHHHHHHcCCCeEE
Q 012335 255 DLGMEIPI----EKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 255 DLg~e~~~----e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
||..+++. +.+..+..+++.+|+++|+++|.
T Consensus 192 DL~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id 226 (316)
T 3qll_A 192 DMAADIGAASTWEPLALARARLVSACAMNGIPAID 226 (316)
T ss_dssp HHHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceee
Confidence 99998876 46778889999999999999854
No 19
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=98.92 E-value=7.9e-10 Score=111.88 Aligned_cols=92 Identities=11% Similarity=0.051 Sum_probs=79.1
Q ss_pred CCCcEEEEcCCCChhhHHHHHHHHHhc----C--CCceEEEeecCHHHHhcHHHHHhc--CCeeEEeCCcccCcCCc---
Q 012335 194 NKIDMIALSFVRKGSDLVEVRNLLRVH----A--KNILLMSKVENLEGVANFDDVLAN--SDAFMVARGDLGMEIPI--- 262 (466)
Q Consensus 194 ~~~d~v~~sfV~sa~dv~~~r~~l~~~----~--~~~~IiaKIE~~~av~nideI~~~--sDgImiaRgDLg~e~~~--- 262 (466)
.|+|+|.+|+|++++|+..+.+++... | ..+.+++.|||++|+.|+++|++. .|++++|..||..+++.
T Consensus 110 ~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L~~G~~DL~~~lg~~~~ 189 (332)
T 3qqw_A 110 GRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVLDFGLMDFVSGHHGAIP 189 (332)
T ss_dssp TCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEEEECHHHHHHTTTTCSC
T ss_pred cCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEEEEcHHHHHHHhCCCcc
Confidence 499999999999999999999888643 2 368899999999999999999953 58999999999888764
Q ss_pred ------------hhHHHHHHHHHHHHHHcCCCeEE
Q 012335 263 ------------EKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 263 ------------e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
+.+..+..+++.+|+++|+++|.
T Consensus 190 ~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id 224 (332)
T 3qqw_A 190 AAAMRSPGQFEHALLVRAKADMVAAALANGIVPAH 224 (332)
T ss_dssp GGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccCCCCcccCHHHHHHHHHHHHHHHHhCCCccc
Confidence 12567888999999999999864
No 20
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=98.88 E-value=1.2e-09 Score=107.72 Aligned_cols=95 Identities=13% Similarity=0.125 Sum_probs=81.3
Q ss_pred hcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc--CCeeEEeCCcccCc
Q 012335 182 KDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN--SDAFMVARGDLGME 259 (466)
Q Consensus 182 ~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~--sDgImiaRgDLg~e 259 (466)
.-..|| +..++.|+|+|.+|+|++++|+..+. ++.+++.|||++|+.|+++|+.. .|++++|+.||..+
T Consensus 72 ~~~~dl-~~~~~~g~~gi~lPKv~s~~~v~~~~--------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~~ 142 (273)
T 1u5h_A 72 DQARDL-EALAGTAYTTVMLPKAESAAQVIELA--------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIAT 142 (273)
T ss_dssp HHHHHH-HHHHTSCCCEEEETTCCCHHHHHTTT--------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHHH
T ss_pred HHHHHH-HHHHhcCCCEEEeCCCCCHHHHHHHh--------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHHH
Confidence 444667 66678899999999999999998763 68999999999999999999953 47999999999998
Q ss_pred CCch-----------hHHHHHHHHHHHHHHcCCCeEE
Q 012335 260 IPIE-----------KIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 260 ~~~e-----------~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
++.. .+..+..+++.+|+++|++++.
T Consensus 143 lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid 179 (273)
T 1u5h_A 143 LGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALD 179 (273)
T ss_dssp HTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCccc
Confidence 8752 3677888999999999999864
No 21
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=98.86 E-value=2e-09 Score=120.37 Aligned_cols=111 Identities=16% Similarity=0.093 Sum_probs=96.8
Q ss_pred CChhcHHHHHhccCc-CC--CcEEEEcCCCChhhHHHHHHHHHhcCC----C-ceEEEeecCHHHHhcHHHHHhcCCeeE
Q 012335 179 LTEKDKEDILNWGVP-NK--IDMIALSFVRKGSDLVEVRNLLRVHAK----N-ILLMSKVENLEGVANFDDVLANSDAFM 250 (466)
Q Consensus 179 lte~D~~di~~~~~~-~~--~d~v~~sfV~sa~dv~~~r~~l~~~~~----~-~~IiaKIE~~~av~nideI~~~sDgIm 250 (466)
+.+.+.+.| ..+.+ .| .+.|++|||+++++++.+++.+...|. + +.++++||++.|+.|+|+|++..|++.
T Consensus 622 ~~~~ql~Ai-~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~s 700 (794)
T 2ols_A 622 CFALECKAL-KRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFS 700 (794)
T ss_dssp HHHHHHHHH-HHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEE
T ss_pred HHHHHHHHH-HHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEE
Confidence 445677777 56677 67 789999999999999999999987663 3 889999999999999999999999999
Q ss_pred EeCCcccCc-CCc---------------hhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 251 VARGDLGME-IPI---------------EKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 251 iaRgDLg~e-~~~---------------e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
||..||... ++. +.|..+.++++.+|+++|||+.++.|+-
T Consensus 701 iGtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~ 756 (794)
T 2ols_A 701 IGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGP 756 (794)
T ss_dssp EEHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHH
T ss_pred ECHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccC
Confidence 999999887 664 4578888999999999999999988864
No 22
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=98.83 E-value=3.2e-09 Score=107.73 Aligned_cols=92 Identities=15% Similarity=0.071 Sum_probs=77.6
Q ss_pred CCCcEEEEcCCCChhhHHHHHHHHHhc----C--CCceEEEeecCHHHHhcHHHHHhc--CCeeEEeCCcccCcCCch--
Q 012335 194 NKIDMIALSFVRKGSDLVEVRNLLRVH----A--KNILLMSKVENLEGVANFDDVLAN--SDAFMVARGDLGMEIPIE-- 263 (466)
Q Consensus 194 ~~~d~v~~sfV~sa~dv~~~r~~l~~~----~--~~~~IiaKIE~~~av~nideI~~~--sDgImiaRgDLg~e~~~e-- 263 (466)
.|+|+|.+|+|++++||..+.++|... | ..+.+++.|||++|+.|+++|++. .|++++|.+||..+++..
T Consensus 109 ~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~~G~~DL~~~lg~~~~ 188 (339)
T 3r4i_A 109 RAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALSFGLMDFVSAHDGAIP 188 (339)
T ss_dssp SCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEEECHHHHHHTTTTSSC
T ss_pred CCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEEECHHHHHHHhCCCcC
Confidence 489999999999999999999888643 2 368899999999999999999943 589999999998887641
Q ss_pred -------------hHHHHHHHHHHHHHHcCCCeEE
Q 012335 264 -------------KIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 264 -------------~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
.+..+..+++.+|+++|+++|.
T Consensus 189 ~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id 223 (339)
T 3r4i_A 189 DTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSH 223 (339)
T ss_dssp GGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccCCCccccCHHHHHHHHHHHHHHHHcCCCCcc
Confidence 1566788999999999999864
No 23
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=98.79 E-value=5.8e-09 Score=112.44 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=93.7
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHH-------hcC----CCceEEEeecCHHHHhcHHHHHhc
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLR-------VHA----KNILLMSKVENLEGVANFDDVLAN 245 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~-------~~~----~~~~IiaKIE~~~av~nideI~~~ 245 (466)
|.+.+.+.+.| ..+.+.|...|++|+|.++++++.+++++. ..| .++.+.++||++.|+.++|+|++.
T Consensus 367 p~if~~QlrAi-~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~ 445 (575)
T 2hwg_A 367 REILRDQLRAI-LRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKE 445 (575)
T ss_dssp HHHHHHHHHHH-HHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTT
T ss_pred hHHHHHHHHHH-HHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHh
Confidence 33444555777 677888999999999999999999988874 223 368899999999999999999999
Q ss_pred CCeeEEeCCcccC----------cCCc------hhHHHHHHHHHHHHHHcCCCeEEeeh
Q 012335 246 SDAFMVARGDLGM----------EIPI------EKIFLAQKVMIHKANIQGKPVVTATQ 288 (466)
Q Consensus 246 sDgImiaRgDLg~----------e~~~------e~v~~~qk~ii~~~~~~gkPvi~ATq 288 (466)
.|++.||..||.. .++. +.|..+.++++.+|+++|||+.++.+
T Consensus 446 vDf~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe 504 (575)
T 2hwg_A 446 VDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGE 504 (575)
T ss_dssp CSEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECST
T ss_pred CCEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCC
Confidence 9999999999987 4442 56788889999999999999999876
No 24
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=98.76 E-value=7.3e-09 Score=111.58 Aligned_cols=109 Identities=18% Similarity=0.089 Sum_probs=90.8
Q ss_pred ChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHH-------hcC----CCceEEEeecCHHHHhcHHHHHhcCCe
Q 012335 180 TEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLR-------VHA----KNILLMSKVENLEGVANFDDVLANSDA 248 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~-------~~~----~~~~IiaKIE~~~av~nideI~~~sDg 248 (466)
.+.+.+.| ..+.+.|...|++|+|.++++++.+++++. ..| .++.+.++||++.|+.++|+|++..|+
T Consensus 372 f~~QlrAi-~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf 450 (572)
T 2wqd_A 372 FRPQLRAL-LRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDF 450 (572)
T ss_dssp HHHHHHHH-HHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSE
T ss_pred HHHHHHHH-HHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCCE
Confidence 34455677 567789999999999999999999888774 223 368899999999999999999999999
Q ss_pred eEEeCCcccCc-CC---------------chhHHHHHHHHHHHHHHcCCCeEEeehh
Q 012335 249 FMVARGDLGME-IP---------------IEKIFLAQKVMIHKANIQGKPVVTATQM 289 (466)
Q Consensus 249 ImiaRgDLg~e-~~---------------~e~v~~~qk~ii~~~~~~gkPvi~ATqm 289 (466)
+.||..||.-- ++ .+.|..+.++++.+|+++|||+.++.++
T Consensus 451 ~siGtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe~ 507 (572)
T 2wqd_A 451 FSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEM 507 (572)
T ss_dssp EEECHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGG
T ss_pred EEECHHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCc
Confidence 99999999821 11 2467788899999999999999998774
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.67 E-value=1.6e-08 Score=104.54 Aligned_cols=105 Identities=10% Similarity=0.034 Sum_probs=87.2
Q ss_pred Chh-cHHHHHhccCc------CCCcEEEEcCCCChhhHHHHHHHHHhc----C---CCceEEEeecCHHH---HhcHHHH
Q 012335 180 TEK-DKEDILNWGVP------NKIDMIALSFVRKGSDLVEVRNLLRVH----A---KNILLMSKVENLEG---VANFDDV 242 (466)
Q Consensus 180 te~-D~~di~~~~~~------~~~d~v~~sfV~sa~dv~~~r~~l~~~----~---~~~~IiaKIE~~~a---v~nideI 242 (466)
|++ ..+|| ...+. .++|+|.+|+|++++|+..+.+.|... | ..+.+++.|||++| +.|+++|
T Consensus 94 T~~~~~~DL-~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eI 172 (433)
T 3oyz_A 94 TRYQGFQHM-LDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDE 172 (433)
T ss_dssp HHHHHHHHH-HHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHH
T ss_pred ChhccHHHH-HHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHH
Confidence 344 45667 45455 789999999999999999998888642 3 26889999999999 9999999
Q ss_pred HhcC-------CeeEEeCCcccCcCCch-------hHHHHHHHHHHHHHHcCCCeEE
Q 012335 243 LANS-------DAFMVARGDLGMEIPIE-------KIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 243 ~~~s-------DgImiaRgDLg~e~~~e-------~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
+.++ +++++|..||..+++.. .+..+..+++.+|+++|++.|.
T Consensus 173 Aaasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aID 229 (433)
T 3oyz_A 173 MGKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVD 229 (433)
T ss_dssp HHCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HhhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCccc
Confidence 9874 69999999999888753 4778889999999999998764
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.08 E-value=5.6e-06 Score=93.15 Aligned_cols=96 Identities=14% Similarity=0.092 Sum_probs=80.4
Q ss_pred CCc---EEEEcCCCChhhHHHHHHHHHh--------cC--CCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCccc-CcC
Q 012335 195 KID---MIALSFVRKGSDLVEVRNLLRV--------HA--KNILLMSKVENLEGVANFDDVLANSDAFMVARGDLG-MEI 260 (466)
Q Consensus 195 ~~d---~v~~sfV~sa~dv~~~r~~l~~--------~~--~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg-~e~ 260 (466)
|.+ .|++|||+++++++.+++++.. .| .+++|.++||++.|+.++++|++..|++.||..||. ..+
T Consensus 701 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~adeIA~~vDf~siGtNDLtQ~~l 780 (876)
T 1vbg_A 701 GVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTF 780 (876)
T ss_dssp TCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 755 6999999999999999987642 24 368899999999999999999999999999999988 333
Q ss_pred Cc----------------------------hhHHHHHHHHHHHHHHc--CCCeEEeehhh
Q 012335 261 PI----------------------------EKIFLAQKVMIHKANIQ--GKPVVTATQML 290 (466)
Q Consensus 261 ~~----------------------------e~v~~~qk~ii~~~~~~--gkPvi~ATqmL 290 (466)
+. +.|-.+-++++++|+++ |+||.++.|+=
T Consensus 781 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~ 840 (876)
T 1vbg_A 781 GYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEHG 840 (876)
T ss_dssp TCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGGG
T ss_pred CCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCCcC
Confidence 32 35667778999999998 99999988753
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=97.97 E-value=4.4e-06 Score=93.99 Aligned_cols=113 Identities=13% Similarity=0.158 Sum_probs=87.6
Q ss_pred CCCChhcHHHHHhccCcC-----CCc---EEEEcCCCChhhHHHHHHHHHh--------cC--CCceEEEeecCHHHHhc
Q 012335 177 PTLTEKDKEDILNWGVPN-----KID---MIALSFVRKGSDLVEVRNLLRV--------HA--KNILLMSKVENLEGVAN 238 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~-----~~d---~v~~sfV~sa~dv~~~r~~l~~--------~~--~~~~IiaKIE~~~av~n 238 (466)
|.+.+-..+.| ..|... |.+ .|++|||+++++++.+++++.. .| .+++|.++||+|.|+.+
T Consensus 673 peif~~QlrAi-~~Aa~~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ 751 (873)
T 1kbl_A 673 PEIAKMQTRAV-MEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALT 751 (873)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHCCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHT
T ss_pred hHHHHHHHHHH-HHHHHHHHHhcCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHH
Confidence 44455555555 222222 754 6999999999999999987752 24 36889999999999999
Q ss_pred HHHHHhcCCeeEEeCCccc-CcCCc----------------------------hhHHHHHHHHHHHHHHc--CCCeEEee
Q 012335 239 FDDVLANSDAFMVARGDLG-MEIPI----------------------------EKIFLAQKVMIHKANIQ--GKPVVTAT 287 (466)
Q Consensus 239 ideI~~~sDgImiaRgDLg-~e~~~----------------------------e~v~~~qk~ii~~~~~~--gkPvi~AT 287 (466)
+++|++.+|++.||-.||. ..++. +.|-..-++++++|+++ |+||.++.
T Consensus 752 ad~iA~~vdf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCG 831 (873)
T 1kbl_A 752 ADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICG 831 (873)
T ss_dssp HHHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred HHHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECC
Confidence 9999999999999999998 44332 34666778899999997 89999988
Q ss_pred hhh
Q 012335 288 QML 290 (466)
Q Consensus 288 qmL 290 (466)
|+=
T Consensus 832 e~~ 834 (873)
T 1kbl_A 832 EHG 834 (873)
T ss_dssp GGG
T ss_pred CCC
Confidence 753
No 28
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=97.93 E-value=5.7e-05 Score=80.30 Aligned_cols=209 Identities=16% Similarity=0.164 Sum_probs=126.1
Q ss_pred CCCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeeEeeecCC
Q 012335 7 NSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKD 86 (466)
Q Consensus 7 ~~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~GpkiR~g~~~~ 86 (466)
+.||+-|. ||.+. +++.+-+.+|++++=++|--+....|+.+++--....+.+...+.. -+- +
T Consensus 87 ~~rRs~L~---~P~~r--km~~kAl~sgAD~vi~DlEDaVap~~k~~~~ar~~l~~al~~~~~~-~~~-----------~ 149 (532)
T 3cuz_A 87 EDRRVEIT---GPVER--KMVINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISY-TNE-----------A 149 (532)
T ss_dssp SCCSEEEE---EECCH--HHHHHHHTSSSSEEEEESSTTCCCCHHHHHHHHHHHHHHHTTCCEE-ECT-----------T
T ss_pred hhceeEEE---ccCCH--HHHHHHHhcCCCEEEEcCccCCCccccchHHHHHHHHHHHhccCcc-cCC-----------C
Confidence 55777775 58865 8999999999999999999988777766554433333222211110 000 1
Q ss_pred CCcEEecCCCEEEEEeCCCCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEecCCCc
Q 012335 87 GKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKN 166 (466)
Q Consensus 87 ~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~Kg 166 (466)
++.+.|++|-.+.|.... + + +.-...|. ++ |
T Consensus 150 G~~~~l~~~~~~l~vR~~---g--------~-----------------~~~e~~VR-iN--------------------g 180 (532)
T 3cuz_A 150 GKIYQLKPNPAVLICRVR---G--------L-----------------HLPEKHVT-WR--------------------G 180 (532)
T ss_dssp SCEEECCSSCCEEEEECC---C--------T-----------------TCEEEEEE-ET--------------------T
T ss_pred CceeeccCCcceeeeecC---C--------C-----------------CCCeeEEE-EC--------------------C
Confidence 122333222212111100 0 0 00001111 11 2
Q ss_pred cccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhc----C---CCceEEEeecCHHHHhcH
Q 012335 167 VNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVH----A---KNILLMSKVENLEGVANF 239 (466)
Q Consensus 167 vnlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~----~---~~~~IiaKIE~~~av~ni 239 (466)
...|+.-++.--+..+|.+.+ .- ...| +||.+|++++++|+..+.+.+... | ..+++.+.|||+.|+.|+
T Consensus 181 ~~~p~~l~D~~l~~~~Dl~~l-~~-~g~g-~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~ 257 (532)
T 3cuz_A 181 EAIPGSLFDFALYFFHNYQAL-LA-KGSG-PYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQM 257 (532)
T ss_dssp EEEEHHHHHHHHHHHHHHHHH-HH-TTCC-CEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSH
T ss_pred CcCchHHHHHHHHHHHHHHHH-Hc-CCCC-CeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhH
Confidence 223333333322344555555 11 1234 999999999999999998887522 3 357899999999999999
Q ss_pred HHHHhc-CC---eeEEeCCcccCcCCch--------------------hHHHHHHHHH-HHHHHcCCCeEE
Q 012335 240 DDVLAN-SD---AFMVARGDLGMEIPIE--------------------KIFLAQKVMI-HKANIQGKPVVT 285 (466)
Q Consensus 240 deI~~~-sD---gImiaRgDLg~e~~~e--------------------~v~~~qk~ii-~~~~~~gkPvi~ 285 (466)
+||+.+ ++ |+..|+.|+..++ +. .+..+..+++ ..|+++|++.|.
T Consensus 258 ~eIa~al~~rv~gLn~G~~Dy~~s~-i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aId 327 (532)
T 3cuz_A 258 DEILHALRDHIVGLNCGRWDYIFSY-IKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMG 327 (532)
T ss_dssp HHHHHHTTTTEEEEECCSHHHHHHH-HHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhccCCceEEEcCHHHHHHHH-HhhcccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCcc
Confidence 999976 44 9999999988766 21 1334444554 999999999876
No 29
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=97.38 E-value=0.00022 Score=75.84 Aligned_cols=92 Identities=10% Similarity=0.052 Sum_probs=74.9
Q ss_pred cCCCcEEEEcCCCChhhHHHHHHHHHhc----C---CCceEEEeecCHHHHhcHHHHHhc-C---CeeEEeCCcccCcCC
Q 012335 193 PNKIDMIALSFVRKGSDLVEVRNLLRVH----A---KNILLMSKVENLEGVANFDDVLAN-S---DAFMVARGDLGMEIP 261 (466)
Q Consensus 193 ~~~~d~v~~sfV~sa~dv~~~r~~l~~~----~---~~~~IiaKIE~~~av~nideI~~~-s---DgImiaRgDLg~e~~ 261 (466)
..|+ ||.+|++++++|+..+.+++... | ..+++.+.|||..|+-|++||+.+ + .|+..||.|+..++.
T Consensus 202 ~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i 280 (528)
T 3cux_A 202 GSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFL 280 (528)
T ss_dssp TCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHH
T ss_pred CCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhh
Confidence 4676 99999999999999998887532 3 368999999999999999999966 3 499999999876653
Q ss_pred c--------------------hhHHHHHHHHHHHHHHcCCCeEE
Q 012335 262 I--------------------EKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 262 ~--------------------e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
. +-+...++.++..|+++|++.|.
T Consensus 281 ~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIg 324 (528)
T 3cux_A 281 KAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIG 324 (528)
T ss_dssp HHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC
T ss_pred hhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCcc
Confidence 1 12455667788999999999875
No 30
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.25 E-value=0.00026 Score=76.81 Aligned_cols=101 Identities=10% Similarity=-0.026 Sum_probs=76.2
Q ss_pred HHHHHhccCc--CCCcEEEEcCCCChhhHHHHHHHHHh----cC---CCceEEEeecCHHHHhcHHHHHh-cC---CeeE
Q 012335 184 KEDILNWGVP--NKIDMIALSFVRKGSDLVEVRNLLRV----HA---KNILLMSKVENLEGVANFDDVLA-NS---DAFM 250 (466)
Q Consensus 184 ~~di~~~~~~--~~~d~v~~sfV~sa~dv~~~r~~l~~----~~---~~~~IiaKIE~~~av~nideI~~-~s---DgIm 250 (466)
..|+ +..+. .|.+||.+|++++++|+..+.+++.. .| ..+++.+.|||+.|+-|++||+. ++ -|+.
T Consensus 372 ~hDl-~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn 450 (731)
T 1p7t_A 372 LYDL-KVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFIN 450 (731)
T ss_dssp HHHH-HHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEE
T ss_pred HhhH-HHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEE
Confidence 4566 43343 45899999999999999999888753 23 36889999999999999999985 33 4999
Q ss_pred EeCCcccCcC-Cc----------------hhHHHHHHHHHH---HHHHcCCCeEE
Q 012335 251 VARGDLGMEI-PI----------------EKIFLAQKVMIH---KANIQGKPVVT 285 (466)
Q Consensus 251 iaRgDLg~e~-~~----------------e~v~~~qk~ii~---~~~~~gkPvi~ 285 (466)
.|+.|+..++ .. +-+...++..+. +|+++|++.|.
T Consensus 451 ~G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIg 505 (731)
T 1p7t_A 451 TGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIG 505 (731)
T ss_dssp ECHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEE
T ss_pred cCHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCcc
Confidence 9999987774 21 112234455565 89999999875
No 31
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=96.81 E-value=0.0024 Score=71.96 Aligned_cols=116 Identities=15% Similarity=0.150 Sum_probs=88.9
Q ss_pred CCCCCChhcHHHHHhcc---CcCCCc---EEEEcCCCChhhHHHHHHHHH--------hcC--CCceEEEeecCHHHHhc
Q 012335 175 DLPTLTEKDKEDILNWG---VPNKID---MIALSFVRKGSDLVEVRNLLR--------VHA--KNILLMSKVENLEGVAN 238 (466)
Q Consensus 175 ~lp~lte~D~~di~~~~---~~~~~d---~v~~sfV~sa~dv~~~r~~l~--------~~~--~~~~IiaKIE~~~av~n 238 (466)
..|.+.+-..+.|.+.+ .+.|.+ .|++|||++.++++.+++++. +.| .++++-.+||.|.|.-.
T Consensus 698 ~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal~ 777 (913)
T 1h6z_A 698 TYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVT 777 (913)
T ss_dssp HSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHT
T ss_pred CChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHHH
Confidence 44666666677773322 224654 799999999999999998763 234 35889999999999999
Q ss_pred HHHHHhcCCeeEEeCCcccC-----c-------C------------Cc-----hhHHHHHHHHHHHHHH--cCCCeEEee
Q 012335 239 FDDVLANSDAFMVARGDLGM-----E-------I------------PI-----EKIFLAQKVMIHKANI--QGKPVVTAT 287 (466)
Q Consensus 239 ideI~~~sDgImiaRgDLg~-----e-------~------------~~-----e~v~~~qk~ii~~~~~--~gkPvi~AT 287 (466)
.|+|++.+|++=||-.||.- + + |+ +.|-..-+..+++|++ .|+||.++.
T Consensus 778 ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgICG 857 (913)
T 1h6z_A 778 ADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICG 857 (913)
T ss_dssp HHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECS
T ss_pred HHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEcC
Confidence 99999999999999888641 1 1 11 4566777888999997 699999998
Q ss_pred hhh
Q 012335 288 QML 290 (466)
Q Consensus 288 qmL 290 (466)
|+=
T Consensus 858 E~~ 860 (913)
T 1h6z_A 858 EHG 860 (913)
T ss_dssp GGG
T ss_pred CCC
Confidence 864
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=95.10 E-value=0.049 Score=61.78 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=69.8
Q ss_pred EEEEcCCCChhhHHHHHHHHH--------hcC--CCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCccc-----CcC--
Q 012335 198 MIALSFVRKGSDLVEVRNLLR--------VHA--KNILLMSKVENLEGVANFDDVLANSDAFMVARGDLG-----MEI-- 260 (466)
Q Consensus 198 ~v~~sfV~sa~dv~~~r~~l~--------~~~--~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg-----~e~-- 260 (466)
.|++|||++.++++.+++.+. +.| .+.+|-.+||.|.++-.+|+|++.+|++=||-.||. ++=
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 589999999999998887553 233 257899999999999999999999999999988873 221
Q ss_pred -----------------Cc-----hhHHHHHHHHHHHHHHcC--CCeEEeehhh
Q 012335 261 -----------------PI-----EKIFLAQKVMIHKANIQG--KPVVTATQML 290 (466)
Q Consensus 261 -----------------~~-----e~v~~~qk~ii~~~~~~g--kPvi~ATqmL 290 (466)
|+ +-|-.+.+..++.|++++ .||.++.||=
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~~ 860 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEHG 860 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGGG
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCcc
Confidence 11 134445555566666655 5899999863
No 33
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=94.62 E-value=0.056 Score=57.22 Aligned_cols=107 Identities=15% Similarity=0.249 Sum_probs=83.4
Q ss_pred CCCcEEEEcCCCChhhHHHHHHHHHh--------cC-----CCceEEEeecCHHHHhcHHHHHhc--C-----------C
Q 012335 194 NKIDMIALSFVRKGSDLVEVRNLLRV--------HA-----KNILLMSKVENLEGVANFDDVLAN--S-----------D 247 (466)
Q Consensus 194 ~~~d~v~~sfV~sa~dv~~~r~~l~~--------~~-----~~~~IiaKIE~~~av~nideI~~~--s-----------D 247 (466)
..+-.+++||.++++|+.++..++.+ .| ..+.||.-+||.+.+.|.++|++. + -
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 56778999999999999999777732 12 256899999999999999999975 1 2
Q ss_pred eeEEeCCcccCcCCc----hhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCC
Q 012335 248 AFMVARGDLGMEIPI----EKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPT 300 (466)
Q Consensus 248 gImiaRgDLg~e~~~----e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PT 300 (466)
-||+|+.|=+.+-|+ -.+..+|.++.+.|+++|.++-.-=-.=-+-=+-.-|+
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~lFHGRGGtvgRGGgp~ 274 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGCGSLPFRGHFSE 274 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEECCSSGGGTCCCT
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeeCCCCCcCCCCCH
Confidence 799999998888886 47889999999999999999664332333333444454
No 34
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=94.28 E-value=1.2 Score=41.24 Aligned_cols=119 Identities=18% Similarity=0.028 Sum_probs=76.2
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEE
Q 012335 333 SPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVL 412 (466)
Q Consensus 333 ~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l 412 (466)
.-++.....|++.|.+++.+-||++|.||.||+.+...-...-+++|+-+.--..+-+|.. ++.+.+.| --.|+.-+.
T Consensus 26 eNT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~-~~e~~~~L-~~~G~~V~t 103 (201)
T 1vp8_A 26 ENTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTM-PPEVEEEL-RKRGAKIVR 103 (201)
T ss_dssp GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSS-CHHHHHHH-HHTTCEEEE
T ss_pred ccHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcC-CHHHHHHH-HhCCCEEEE
Confidence 3467888899999999999999999999999999888777778999832210011334544 33343333 244554333
Q ss_pred cCCCCC-------CCCc-cCHHHHHHHHHH---------------HHHHcCCCCCCCEEEEEEec
Q 012335 413 SSGSAR-------ASDE-ESTEETIEFALQ---------------HAKAKGLCRPGDSVVALHRM 454 (466)
Q Consensus 413 ~~~~~~-------~~~~-~~~e~~i~~al~---------------~~~~~G~~~~GD~VVvv~g~ 454 (466)
...... +.|- -..-+.+.+++. .|.+.|++.. +.||.+.|.
T Consensus 104 ~tH~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGGT 167 (201)
T 1vp8_A 104 QSHILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGR 167 (201)
T ss_dssp CCCTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECS
T ss_pred EeccccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEccc
Confidence 221110 0110 123445555555 3679999999 999999887
No 35
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=94.24 E-value=0.14 Score=57.98 Aligned_cols=108 Identities=19% Similarity=0.176 Sum_probs=93.5
Q ss_pred CCcEEEEcCCCChhhHHHHHHHHHhcC--CCceEEEeecCHHHHhcHHHHHhc--C-----------CeeEEeCCcccCc
Q 012335 195 KIDMIALSFVRKGSDLVEVRNLLRVHA--KNILLMSKVENLEGVANFDDVLAN--S-----------DAFMVARGDLGME 259 (466)
Q Consensus 195 ~~d~v~~sfV~sa~dv~~~r~~l~~~~--~~~~IiaKIE~~~av~nideI~~~--s-----------DgImiaRgDLg~e 259 (466)
.+..+++|+.++++||.++--+.++.| ..+.|+.-.||.+.++|.++|++. + --||+|..|=+-+
T Consensus 528 a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVMLGYSDS~KD 607 (970)
T 1jqo_A 528 SFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKD 607 (970)
T ss_dssp TEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHH
T ss_pred hhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeccccccc
Confidence 366788999999999999999999888 468999999999999999999986 2 2699999999988
Q ss_pred CCc----hhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHH
Q 012335 260 IPI----EKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRA 302 (466)
Q Consensus 260 ~~~----e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRA 302 (466)
-|. -.+..+|.++.+.|+++|.++..-=-.=.|.=.-.-||..
T Consensus 608 ~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvgRGGgp~~~ 654 (970)
T 1jqo_A 608 AGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHL 654 (970)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCCCCCCChHH
Confidence 887 4888999999999999999988766666777777778764
No 36
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=93.92 E-value=1.2 Score=41.25 Aligned_cols=119 Identities=16% Similarity=0.068 Sum_probs=71.8
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEE
Q 012335 333 SPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVL 412 (466)
Q Consensus 333 ~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l 412 (466)
.-.+.....|++.|.+++.+-||++|.+|.||+.+...-.. -+++|+-+.--..+-+|.. ++.+.+.| .-.|+.-+.
T Consensus 34 eNT~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvVTh~~GF~~pg~~e~-~~e~~~~L-~~~G~~V~t 110 (206)
T 1t57_A 34 ENTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTHHAGFREKGQLEL-EDEARDAL-LERGVNVYA 110 (206)
T ss_dssp GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECCCTTSSSTTCCSS-CHHHHHHH-HHHTCEEEC
T ss_pred ccHHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEEeCcCCCCCCCCCcC-CHHHHHHH-HhCCCEEEE
Confidence 34678888999999999999999999999999998886644 7888822110001334533 33333333 234543222
Q ss_pred cCCCCCC-------CCc-cCHHHHHHHHH--------------HHHHHcCCCCCCCEEEEEEec
Q 012335 413 SSGSARA-------SDE-ESTEETIEFAL--------------QHAKAKGLCRPGDSVVALHRM 454 (466)
Q Consensus 413 ~~~~~~~-------~~~-~~~e~~i~~al--------------~~~~~~G~~~~GD~VVvv~g~ 454 (466)
....... .|- -..-+.+.+++ -.|.+.|++..|+.||.+.|.
T Consensus 111 ~tH~lsG~eR~is~kfGG~~p~eiiA~tLR~fgqG~KV~vEi~lMAaDAGlIp~geeVIAiGGT 174 (206)
T 1t57_A 111 GSHALSGVGRGISNRFGGVTPVEIMAETLRMVSQGFKVCVEIAIMAADAGLIPVDEEVIAIGGT 174 (206)
T ss_dssp CSCTTTTHHHHHHHHHCSCCHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSSCSSSCEEEEECS
T ss_pred eeccccchhHHHHHhcCCCCHHHHHHHHHHHhCCCceEEEEEeeeeecCCCCCCCCeEEEEccc
Confidence 1111000 000 01223333222 136799999999999999987
No 37
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=92.99 E-value=0.16 Score=57.00 Aligned_cols=109 Identities=18% Similarity=0.240 Sum_probs=91.5
Q ss_pred cCCCcEEEEcCCCChhhHHHHHHHHHhcC--CCceEEEeecCHHHHhcHHHHHhcC-------------CeeEEeCCccc
Q 012335 193 PNKIDMIALSFVRKGSDLVEVRNLLRVHA--KNILLMSKVENLEGVANFDDVLANS-------------DAFMVARGDLG 257 (466)
Q Consensus 193 ~~~~d~v~~sfV~sa~dv~~~r~~l~~~~--~~~~IiaKIE~~~av~nideI~~~s-------------DgImiaRgDLg 257 (466)
...+..+++|+.++++||.++--+.++.| ..+.|+.-.||.+.++|.++|++.. --||+|..|=+
T Consensus 466 ~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~ 545 (883)
T 1jqn_A 466 QGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSA 545 (883)
T ss_dssp TTSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHH
T ss_pred hhhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeecccc
Confidence 45677899999999999999999998888 3688999999999999999999861 26999999988
Q ss_pred CcCCc----hhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCH
Q 012335 258 MEIPI----EKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTR 301 (466)
Q Consensus 258 ~e~~~----e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTR 301 (466)
-+-|. -.+..+|.++.+.|+++|.++..-=-.=.|+=.-.-||.
T Consensus 546 KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFhGRGGsvgRGGgp~~ 593 (883)
T 1jqn_A 546 KDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAH 593 (883)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECSSTGGGSCHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCchH
Confidence 88886 488899999999999999998875555566666556644
No 38
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=92.31 E-value=1.2 Score=42.40 Aligned_cols=45 Identities=16% Similarity=0.177 Sum_probs=37.4
Q ss_pred HHHHHHHHHhCCceE--EEecCCCCHHHHHHHHHHHHHHHHHcCCce
Q 012335 24 VEMAEKLLRAGMNVA--RFNFSHGSHAYHQETLDNLRTAMNNTGILC 68 (466)
Q Consensus 24 ~~~l~~li~~G~~v~--RiN~shg~~~~~~~~i~~ir~~~~~~~~~i 68 (466)
.+.+++.+++|++.+ .+|....+.++..+.++.++++++++|.|+
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~v 148 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPL 148 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCE
Confidence 577899999999999 899888888877778888888887777664
No 39
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=91.70 E-value=1.7 Score=41.78 Aligned_cols=69 Identities=10% Similarity=0.092 Sum_probs=50.0
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCC-CceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCcccCcC
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAK-NILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGDLGMEI 260 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~-~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgDLg~e~ 260 (466)
+.+.+.|+|||-.||..+.++++++++.. +. .++.+.-|- ..++++|+.+.+++ +||+.++|.=+..+=
T Consensus 166 ~~a~~~GAD~vkt~~~~~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~d 239 (263)
T 1w8s_A 166 RIALELGADAMKIKYTGDPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRD 239 (263)
T ss_dssp HHHHHHTCSEEEEECCSSHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTT
T ss_pred HHHHHcCCCEEEEcCCCCHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcC
Confidence 45788999999999866677777777654 22 355555553 35677789888887 799999988666543
No 40
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=84.26 E-value=3.3 Score=42.29 Aligned_cols=99 Identities=17% Similarity=0.154 Sum_probs=73.5
Q ss_pred HHHHHhccCcCCCcEEEEcCCCChhhHHHHHHH---HHhcCCCceEEEeec--CHHHHhcHHHHHhcCCeeEEeCCcccC
Q 012335 184 KEDILNWGVPNKIDMIALSFVRKGSDLVEVRNL---LRVHAKNILLMSKVE--NLEGVANFDDVLANSDAFMVARGDLGM 258 (466)
Q Consensus 184 ~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~---l~~~~~~~~IiaKIE--~~~av~nideI~~~sDgImiaRgDLg~ 258 (466)
.+.| ....+.|+|.|-++ |.+.++...++++ |...|.+++++|-|= -..++..+++..+..|.+=|.+|.+|-
T Consensus 41 v~QI-~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~ 118 (406)
T 4g9p_A 41 TAQV-LELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGR 118 (406)
T ss_dssp HHHH-HHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCS
T ss_pred HHHH-HHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCc
Confidence 3344 34467999999888 7787777766554 555678999999884 355788888888899999999999873
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 259 EIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 259 e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
. .+...--+.++++|+++|+|+=+-.
T Consensus 119 ~---~k~~e~~~~vv~~ak~~~~pIRIGV 144 (406)
T 4g9p_A 119 G---RHKDEHFAEMIRIAMDLGKPVRIGA 144 (406)
T ss_dssp T---HHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred c---ccHHHHHHHHHHHHHHccCCceecc
Confidence 1 2223344679999999999976554
No 41
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=81.40 E-value=5 Score=38.67 Aligned_cols=109 Identities=14% Similarity=0.039 Sum_probs=69.9
Q ss_pred CCCChhcHHHHHhccCcC--CCcEEEEcCCCChhhHHHHHHHHHhcCC-CceEEEeecCHHHHhcHHHH--------Hhc
Q 012335 177 PTLTEKDKEDILNWGVPN--KIDMIALSFVRKGSDLVEVRNLLRVHAK-NILLMSKVENLEGVANFDDV--------LAN 245 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~--~~d~v~~sfV~sa~dv~~~r~~l~~~~~-~~~IiaKIE~~~av~nideI--------~~~ 245 (466)
|..|+.|.+.+.+-+.+. |++.|+++ +..+..+++.|...|. .++|.+-|=-|.|-.+.+.. -.=
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~G 98 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYG 98 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcC
Confidence 667899988887778888 99999876 6778888988864344 68888888555554433322 222
Q ss_pred CCeeEE--eCCcccCcCCchhHHHHHHHHHHHHHHcCCCe--EEeehhh
Q 012335 246 SDAFMV--ARGDLGMEIPIEKIFLAQKVMIHKANIQGKPV--VTATQML 290 (466)
Q Consensus 246 sDgImi--aRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPv--i~ATqmL 290 (466)
+|.|-+ ..|-| .+=..+.+..--+.+.+.|...|+|+ |+.|-.|
T Consensus 99 AdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L 146 (260)
T 1p1x_A 99 ADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL 146 (260)
T ss_dssp CSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH
T ss_pred CCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC
Confidence 565422 22211 01113456666677888888778884 7665544
No 42
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=79.02 E-value=3.4 Score=38.77 Aligned_cols=56 Identities=16% Similarity=0.057 Sum_probs=41.6
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhc
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVAN 238 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~n 238 (466)
|..|..|.+.+.+-+.+.|++.|+++ +..+...++.+. +.++++.+-+=.|.|-.+
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~--~~~v~v~~vigFP~G~~~ 69 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP--HAPFRLVTVVGFPLGYQE 69 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT--TCSSEEEEEESTTTCCSC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--CCCceEEEEecCCCCCCc
Confidence 66788888888778888999999976 567777777764 346888888866555333
No 43
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=77.06 E-value=4.8 Score=41.03 Aligned_cols=86 Identities=8% Similarity=0.047 Sum_probs=64.0
Q ss_pred hccCcCCCcEEEEcCCC-----------ChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALSFVR-----------KGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~-----------sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg 257 (466)
+.+.+.|+|+|...--. ..+.+..++++..+. .+.+++-+-++..++-+. +..|.+-||-+++.
T Consensus 163 ~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~~d~~~~~~l~---~~vd~lkIgs~~~~ 237 (385)
T 3nvt_A 163 ESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEIVTPADIEVAL---DYVDVIQIGARNMQ 237 (385)
T ss_dssp HHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCSGGGHHHHT---TTCSEEEECGGGTT
T ss_pred HHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEecCCHHHHHHHH---hhCCEEEECccccc
Confidence 55677999988654211 246778888887765 589999888887765554 45899999988875
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
- ..++..+.+.||||++.|.|.
T Consensus 238 n-----------~~LL~~~a~~gkPVilk~G~~ 259 (385)
T 3nvt_A 238 N-----------FELLKAAGRVDKPILLKRGLS 259 (385)
T ss_dssp C-----------HHHHHHHHTSSSCEEEECCTT
T ss_pred C-----------HHHHHHHHccCCcEEEecCCC
Confidence 3 256777888999999999873
No 44
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=76.19 E-value=42 Score=31.84 Aligned_cols=152 Identities=18% Similarity=0.126 Sum_probs=92.7
Q ss_pred ChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHH----------hcHHHHHhc-CCe
Q 012335 180 TEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGV----------ANFDDVLAN-SDA 248 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av----------~nideI~~~-sDg 248 (466)
+..|.+.+.+.+.+.|++.|+++ +--+.... ..+..++.|+.+..++ ...++.++. +|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~----~~~v~~~~------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ----RGIAEKYY------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC----HHHHHHHC------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEEC----HHHHHHhh------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 56677766678899999999998 33333333 3357777777665554 445666655 787
Q ss_pred eEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHhhhhhccchhhHHHHHhhC
Q 012335 249 FMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAAENFINYGDLFKKIMETA 328 (466)
Q Consensus 249 ImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naaE~~~~~~~~~~~~~~~~ 328 (466)
|-+ |-.+| +-...++..--+++.+.|+++|.|+|+=+ .|. -.|+.+
T Consensus 109 v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~----------~~~---G~~~~~------------------- 154 (263)
T 1w8s_A 109 VGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVES----------FPR---GGKVVN------------------- 154 (263)
T ss_dssp EEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEE----------CCC---STTCCC-------------------
T ss_pred EEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEe----------eCC---CCcccc-------------------
Confidence 754 44444 23445666667889999999999988521 110 001100
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCc-hHHHHHHhcCCCCCEEEE
Q 012335 329 PVPMSPLESLASSAVRTANCIKAALILVLTRGG-TTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 329 ~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG-~ta~~vSk~RP~~PIiAv 379 (466)
.. ..+.+. .++++|.+.+|+.|-+-+..+ ..-+.+.+.-|.+||++.
T Consensus 155 --~~-s~~~i~-~a~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~~~~pV~as 202 (263)
T 1w8s_A 155 --ET-APEIVA-YAARIALELGADAMKIKYTGDPKTFSWAVKVAGKVPVLMS 202 (263)
T ss_dssp --TT-CHHHHH-HHHHHHHHHTCSEEEEECCSSHHHHHHHHHHTTTSCEEEE
T ss_pred --CC-CHHHHH-HHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhCCCCeEEEE
Confidence 00 123333 446778889999877776422 223444444476799998
No 45
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=75.60 E-value=3.2 Score=39.21 Aligned_cols=105 Identities=16% Similarity=0.047 Sum_probs=62.3
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhc-------HHHHHhcCCee
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVAN-------FDDVLANSDAF 249 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~n-------ideI~~~sDgI 249 (466)
|..|+.|.+.+.+-+.++|++.|+++ +..+..+++.|. | +++.+-|=-|.|-.+ .++|-.=+|.|
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~--g--v~v~tvigFP~G~~~~~~k~~E~~~i~~GAdEI 83 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLR--K--VKLCVVADFPFGALPTASRIALVSRLAEVADEI 83 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCS--S--SEEEEEESTTTCCSCHHHHHHHHHHHTTTCSEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--C--CeEEEEeCCCCCCCchHHHHHHHHHHHCCCCEE
Confidence 66789998888778889999999987 667777777763 2 888877755444332 23322225554
Q ss_pred EE--eCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 250 MV--ARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 250 mi--aRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
-+ ..|-| .+=..+.+..--+.+.+.|...+.|||+.|-.|
T Consensus 84 D~Vinig~~-~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L 125 (226)
T 1vcv_A 84 DVVAPIGLV-KSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL 125 (226)
T ss_dssp EEECCHHHH-HTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC
T ss_pred EEecchhhh-cCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC
Confidence 22 11111 000123444444555566655566788766555
No 46
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=73.55 E-value=30 Score=32.64 Aligned_cols=100 Identities=16% Similarity=0.092 Sum_probs=62.5
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHH-------H-HHhcCCe
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFD-------D-VLANSDA 248 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nid-------e-I~~~sDg 248 (466)
|.-|..|.+.+.+-+.++|++.|+++ +.-+ ..++.+.... .+++.+-|=-|.|-.+.+ + |-.=+|.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~~-~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEKL-GVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHHH-TCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCCC-CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 66788888888778888999999986 5667 6777775431 477777774444322222 2 2222565
Q ss_pred eEE--eCCcccCcCCchhHHHHHHHHHHHHHHcCCCe--EEee
Q 012335 249 FMV--ARGDLGMEIPIEKIFLAQKVMIHKANIQGKPV--VTAT 287 (466)
Q Consensus 249 Imi--aRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPv--i~AT 287 (466)
|=+ ..|.|- +.+..--+.+.+.|...|+|+ |+.|
T Consensus 105 ID~vinig~~~-----~~v~~ei~~v~~a~~~~g~~lKvIlEt 142 (234)
T 1n7k_A 105 LDVVPHLSLGP-----EAVYREVSGIVKLAKSYGAVVKVILEA 142 (234)
T ss_dssp EEECCCGGGCH-----HHHHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred EEEeccchHHH-----HHHHHHHHHHHHHHhhcCCeEEEEEec
Confidence 532 233321 145555567888888888886 6544
No 47
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=72.57 E-value=11 Score=36.82 Aligned_cols=96 Identities=14% Similarity=0.135 Sum_probs=61.2
Q ss_pred hccCcCCCcEEEEc------CCCChhhH-HHHHHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDL-VEVRNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv-~~~r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++= +-++...+..+.+++||+-+= +.++++....--+. +||+|+-.-...
T Consensus 36 ~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~ 115 (309)
T 3fkr_A 36 DFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHG 115 (309)
T ss_dssp HHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBT
T ss_pred HHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCc
Confidence 67789999998873 22233333 334444455567899999873 55666655555554 799999876553
Q ss_pred --CcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 258 --MEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 258 --~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
.-.+.+.+...-+.|.+ +.+.|+++--
T Consensus 116 ~~~~~s~~~l~~~f~~va~---a~~lPiilYn 144 (309)
T 3fkr_A 116 ATFRVPEAQIFEFYARVSD---AIAIPIMVQD 144 (309)
T ss_dssp TTBCCCHHHHHHHHHHHHH---HCSSCEEEEE
T ss_pred cCCCCCHHHHHHHHHHHHH---hcCCCEEEEe
Confidence 23345666665565554 4589999754
No 48
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=72.28 E-value=18 Score=35.02 Aligned_cols=94 Identities=12% Similarity=0.110 Sum_probs=60.6
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEee---cCHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKV---ENLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKI---E~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.+ ++..++..+.+++||+-+ -+.++++.....-+. +|++|+-.-.+.
T Consensus 30 ~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 109 (292)
T 3daq_A 30 NFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYN 109 (292)
T ss_dssp HHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 67789999999774 2233333333 344444556789999988 355666655555544 799999865543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
- .+.+.+...-+.|.+++ +.|+++-
T Consensus 110 ~-~~~~~l~~~f~~ia~a~---~lPiilY 134 (292)
T 3daq_A 110 K-TNQRGLVKHFEAIADAV---KLPVVLY 134 (292)
T ss_dssp C-CCHHHHHHHHHHHHHHH---CSCEEEE
T ss_pred C-CCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 2 34456666666665554 8999975
No 49
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=71.86 E-value=9.1 Score=36.74 Aligned_cols=86 Identities=12% Similarity=0.088 Sum_probs=62.9
Q ss_pred hccCcCCCcEEEEcCCC--C---------hhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALSFVR--K---------GSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~--s---------a~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg 257 (466)
+.+.+.|+|+|....-. + .+.++.+++++.+. .+.+++-+-++..++-+.+. .|.+-||.+++.
T Consensus 44 ~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---vd~~kIga~~~~ 118 (262)
T 1zco_A 44 EFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDTRHVELVAKY---SDILQIGARNSQ 118 (262)
T ss_dssp HHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCGGGHHHHHHH---CSEEEECGGGTT
T ss_pred HHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCHHhHHHHHhh---CCEEEECccccc
Confidence 55677899988765432 1 67888899998775 48999999888887666554 799999988764
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
- ..+++.+.+.||||++.|.|-
T Consensus 119 n-----------~~ll~~~a~~~kPV~lk~G~~ 140 (262)
T 1zco_A 119 N-----------FELLKEVGKVENPVLLKRGMG 140 (262)
T ss_dssp C-----------HHHHHHHTTSSSCEEEECCTT
T ss_pred C-----------HHHHHHHHhcCCcEEEecCCC
Confidence 2 223444555899999987653
No 50
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=71.46 E-value=6 Score=41.51 Aligned_cols=50 Identities=22% Similarity=0.351 Sum_probs=41.5
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Q 012335 10 KTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRT 59 (466)
Q Consensus 10 ~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~ 59 (466)
+-.+-+.+|...+..+.++.|+++|+++.=||++||..+...++++.+|+
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~ 268 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 268 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHH
Confidence 45566788888888999999999999999999999987776666666664
No 51
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=69.55 E-value=22 Score=34.24 Aligned_cols=99 Identities=17% Similarity=0.130 Sum_probs=64.4
Q ss_pred CChhcHHHHHhccCcCCCcEEEEcCCCChh------hHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-CCeeEE
Q 012335 179 LTEKDKEDILNWGVPNKIDMIALSFVRKGS------DLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-SDAFMV 251 (466)
Q Consensus 179 lte~D~~di~~~~~~~~~d~v~~sfV~sa~------dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-sDgImi 251 (466)
++..++..|.+.+.+.|++.|-+.|-.+.+ |..++-+.+.+. .++++.+-.-+.+ .++..+++ .|.|+|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n~~---~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPNMK---GYEAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSSHH---HHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCCHH---HHHHHHHCCCCEEEE
Confidence 677777776577788999999885533333 333333333332 4677767664433 33333333 578887
Q ss_pred eCCcccC---------cCCchhHHHHHHHHHHHHHHcCCCeE
Q 012335 252 ARGDLGM---------EIPIEKIFLAQKVMIHKANIQGKPVV 284 (466)
Q Consensus 252 aRgDLg~---------e~~~e~v~~~qk~ii~~~~~~gkPvi 284 (466)
. ++. ..+.++....-+++++.|+++|++|-
T Consensus 99 ~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~ 137 (295)
T 1ydn_A 99 F---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIR 137 (295)
T ss_dssp E---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred E---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 3 322 36778888888999999999999985
No 52
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=69.05 E-value=24 Score=34.88 Aligned_cols=127 Identities=11% Similarity=0.106 Sum_probs=77.3
Q ss_pred CCChhcHHHHHh-ccCcCCCcEEEE-cCCCChhhHHHHHHHHHh-----cCCCceEEEeecCHHHHhcHHHHHhc-CCe-
Q 012335 178 TLTEKDKEDILN-WGVPNKIDMIAL-SFVRKGSDLVEVRNLLRV-----HAKNILLMSKVENLEGVANFDDVLAN-SDA- 248 (466)
Q Consensus 178 ~lte~D~~di~~-~~~~~~~d~v~~-sfV~sa~dv~~~r~~l~~-----~~~~~~IiaKIE~~~av~nideI~~~-sDg- 248 (466)
.++..|+..|.+ ...+.|+|+|=+ +|+.++++.+.++++... .-++..+.+-.=+.. .++..+++ .|.
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v 113 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVL 113 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEE
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEE
Confidence 467777777756 666799999988 667778776666665442 224567777665554 44444443 464
Q ss_pred -eEEeCCccc----CcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh
Q 012335 249 -FMVARGDLG----MEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 310 (466)
Q Consensus 249 -ImiaRgDLg----~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na 310 (466)
|+++-.|+= .....++.....+.+++.|+++|+.|.+.... +-..++-+...+.+++.+
T Consensus 114 ~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~ 177 (337)
T 3ble_A 114 NLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEH 177 (337)
T ss_dssp EEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHH
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHH
Confidence 344333321 12345666777788999999999998875432 111123344555566655
No 53
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=69.00 E-value=24 Score=34.19 Aligned_cols=96 Identities=7% Similarity=0.067 Sum_probs=62.0
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHHHHH-HHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVEVRN-LLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~~r~-~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.++-+ ..+..+.+++||+-+=+ .++++.....-+. +|++|+..-.+.
T Consensus 31 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 110 (294)
T 3b4u_A 31 RRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYF 110 (294)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCC
Confidence 77889999999873 4445555444444 44444567899999844 6666666665554 799999866553
Q ss_pred CcCCchhHHHHHHHHHHHHHHc---CCCeEEee
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQ---GKPVVTAT 287 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~---gkPvi~AT 287 (466)
-..+.+.+...-+.|. .+. +.|+++--
T Consensus 111 ~~~s~~~l~~~f~~va---~a~p~~~lPiilYn 140 (294)
T 3b4u_A 111 KNVSDDGLFAWFSAVF---SKIGKDARDILVYN 140 (294)
T ss_dssp CSCCHHHHHHHHHHHH---HHHCTTCCCEEEEE
T ss_pred CCCCHHHHHHHHHHHH---HhcCCCCCcEEEEE
Confidence 3134455555555554 445 79998753
No 54
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=67.86 E-value=17 Score=35.62 Aligned_cols=94 Identities=12% Similarity=0.139 Sum_probs=60.8
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHHH-HHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVEV-RNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~~-r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.++ +..++..+.+++||+-+= +.++++.....-+. +|++|+..-.+.
T Consensus 51 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~ 130 (314)
T 3qze_A 51 DFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYN 130 (314)
T ss_dssp HHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 67788999999873 33344444443 344455567899999884 46666666665555 799999865543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
....+.+...-+.|.+ +.+.|+++-
T Consensus 131 -~~s~~~l~~~f~~va~---a~~lPiilY 155 (314)
T 3qze_A 131 -KPTQEGMYQHFRHIAE---AVAIPQILY 155 (314)
T ss_dssp -CCCHHHHHHHHHHHHH---HSCSCEEEE
T ss_pred -CCCHHHHHHHHHHHHH---hcCCCEEEE
Confidence 2344565555555554 458999975
No 55
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=67.36 E-value=31 Score=33.50 Aligned_cols=94 Identities=17% Similarity=0.119 Sum_probs=61.5
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHHH-HHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVEV-RNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~~-r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.++ +...+..+.+++||+-+=+ .++++.....-+. +|++|+..-.+.
T Consensus 39 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 118 (303)
T 2wkj_A 39 QFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYY 118 (303)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCC
Confidence 77889999999873 34444444444 4444455668999999843 6666666655554 799998765542
Q ss_pred CcCCchhHHHHHHHHHHHHHHcC-CCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQG-KPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~g-kPvi~A 286 (466)
- .+.+.+...-+.|.++ .+ .|+++-
T Consensus 119 ~-~s~~~l~~~f~~va~a---~~~lPiilY 144 (303)
T 2wkj_A 119 P-FSFEEHCDHYRAIIDS---ADGLPMVVY 144 (303)
T ss_dssp C-CCHHHHHHHHHHHHHH---HTTCCEEEE
T ss_pred C-CCHHHHHHHHHHHHHh---CCCCCEEEE
Confidence 2 2456666666666554 45 999874
No 56
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=67.32 E-value=32 Score=33.45 Aligned_cols=96 Identities=17% Similarity=0.065 Sum_probs=60.5
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHHH-HHHHHhcCCCceEEEee---cCHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVEV-RNLLRVHAKNILLMSKV---ENLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~~-r~~l~~~~~~~~IiaKI---E~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.++ +...+..+.+++||+-+ -+.++++......+. +|++|+-.-.+-
T Consensus 42 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 121 (307)
T 3s5o_A 42 HKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYY 121 (307)
T ss_dssp HHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 68889999999763 33344444444 44445556789999987 445566555555554 799998644432
Q ss_pred -CcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 258 -MEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 258 -~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
.....+.+...-+.| |.+.+.|+++--
T Consensus 122 ~~~~s~~~l~~~f~~i---a~a~~lPiilYn 149 (307)
T 3s5o_A 122 RGRMSSAALIHHYTKV---ADLSPIPVVLYS 149 (307)
T ss_dssp GGGCCHHHHHHHHHHH---HHHCSSCEEEEE
T ss_pred CCCCCHHHHHHHHHHH---HhhcCCCEEEEe
Confidence 224455666666666 445689999753
No 57
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=67.01 E-value=20 Score=34.76 Aligned_cols=94 Identities=10% Similarity=0.065 Sum_probs=58.9
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCC-CceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCcc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAK-NILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGDL 256 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~-~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgDL 256 (466)
+|.++.|+|++++. +.-|.++=.+ ++...+..+. ++++|+-+= +.++++.....-+. +|++|+-.-.+
T Consensus 35 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 114 (301)
T 3m5v_A 35 KRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYY 114 (301)
T ss_dssp HHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 67788999999774 2223333333 3444455566 799999884 45566555555554 79999986554
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 257 GMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 257 g~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
.- .+.+.+...-+.|.+ +.+.|+++-
T Consensus 115 ~~-~s~~~l~~~f~~va~---a~~lPiilY 140 (301)
T 3m5v_A 115 NK-PTQQGLYEHYKAIAQ---SVDIPVLLY 140 (301)
T ss_dssp SC-CCHHHHHHHHHHHHH---HCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHHHH---hCCCCEEEE
Confidence 32 234555555555544 458999975
No 58
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=66.74 E-value=9.3 Score=38.55 Aligned_cols=48 Identities=23% Similarity=0.356 Sum_probs=36.6
Q ss_pred EEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Q 012335 12 KIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRT 59 (466)
Q Consensus 12 kIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~ 59 (466)
.+-+.+|......+.++.++++|++++=||.+||..+.+.+.++.+|+
T Consensus 98 ~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 98 RVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 145 (366)
T ss_dssp CCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred eEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 344556655567899999999999999999999987765555555554
No 59
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=66.65 E-value=38 Score=32.65 Aligned_cols=95 Identities=15% Similarity=0.109 Sum_probs=61.0
Q ss_pred hccCc-CCCcEEEEc------CCCChhhHHHH-HHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCCcc
Q 012335 189 NWGVP-NKIDMIALS------FVRKGSDLVEV-RNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARGDL 256 (466)
Q Consensus 189 ~~~~~-~~~d~v~~s------fV~sa~dv~~~-r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRgDL 256 (466)
+|.++ .|+|++++. +.-|.++=.++ +...+..+.+++||+-+=+ .++++.....-+. +|++|+..-.+
T Consensus 31 ~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 110 (293)
T 1f6k_A 31 RHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFY 110 (293)
T ss_dssp HHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 77888 999999873 44444444443 4444455668999999844 6666666555544 79999976554
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 257 GMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 257 g~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
- -.+.+.+...-+.|.+ +.+.|+++--
T Consensus 111 ~-~~~~~~l~~~f~~va~---a~~lPiilYn 137 (293)
T 1f6k_A 111 Y-KFSFPEIKHYYDTIIA---ETGSNMIVYS 137 (293)
T ss_dssp S-CCCHHHHHHHHHHHHH---HHCCCEEEEE
T ss_pred C-CCCHHHHHHHHHHHHH---hCCCCEEEEE
Confidence 2 1234566655566654 4478998743
No 60
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=66.57 E-value=33 Score=33.12 Aligned_cols=95 Identities=14% Similarity=0.081 Sum_probs=60.7
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.+ ++...+..+.+++||+-+=+ .++++....--+. +|++|+..-.+.
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 107 (294)
T 2ehh_A 28 EFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYN 107 (294)
T ss_dssp HHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 77789999999873 3344444444 34444455668999999843 6666666655554 799999765542
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
- .+.+.+...-+.| |.+.+.|+++--
T Consensus 108 ~-~s~~~l~~~f~~v---a~a~~lPiilYn 133 (294)
T 2ehh_A 108 K-PTQRGLYEHFKTV---AQEVDIPIIIYN 133 (294)
T ss_dssp C-CCHHHHHHHHHHH---HHHCCSCEEEEE
T ss_pred C-CCHHHHHHHHHHH---HHhcCCCEEEEe
Confidence 2 2445555555555 445689999753
No 61
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=66.12 E-value=21 Score=34.33 Aligned_cols=109 Identities=20% Similarity=0.316 Sum_probs=62.8
Q ss_pred HHHHHhccCcCCCcEE--EEcC---CCChhhHHHH-----------------HHHHHhcCCCceEEEeec-CH---HHHh
Q 012335 184 KEDILNWGVPNKIDMI--ALSF---VRKGSDLVEV-----------------RNLLRVHAKNILLMSKVE-NL---EGVA 237 (466)
Q Consensus 184 ~~di~~~~~~~~~d~v--~~sf---V~sa~dv~~~-----------------r~~l~~~~~~~~IiaKIE-~~---~av~ 237 (466)
.+.+ +...+.|+|+| .+|| +-+.--|+.. -+.+++.+.+++++.+.- |+ -|++
T Consensus 35 ~~~~-~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e 113 (267)
T 3vnd_A 35 LKII-QTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGID 113 (267)
T ss_dssp HHHH-HHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHH
T ss_pred HHHH-HHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHH
Confidence 4445 45567899975 4556 3333333332 122333334677888765 54 3555
Q ss_pred cH-HHHHhc-CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeE-EeehhhHhhhcCCCCCHHHHHhHHHhhh
Q 012335 238 NF-DDVLAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVV-TATQMLESMIKSPRPTRAEATDVANAAE 312 (466)
Q Consensus 238 ni-deI~~~-sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi-~ATqmLeSM~~~p~PTRAEvsDv~naaE 312 (466)
++ ++..++ +||++|. ++|+++ ..+.+..|+++|...| +. +|.-+.+.+..++..+.
T Consensus 114 ~f~~~~~~aGvdgvii~------Dlp~ee----~~~~~~~~~~~gl~~i~li---------aP~t~~eri~~i~~~~~ 172 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIA------DVPVEE----SAPFSKAAKAHGIAPIFIA---------PPNADADTLKMVSEQGE 172 (267)
T ss_dssp HHHHHHHHHTCCEEEET------TSCGGG----CHHHHHHHHHTTCEEECEE---------CTTCCHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCCEEEeC------CCCHhh----HHHHHHHHHHcCCeEEEEE---------CCCCCHHHHHHHHHhCC
Confidence 55 444444 7999994 555555 5678889999998655 33 34444555555655543
No 62
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=65.28 E-value=60 Score=29.93 Aligned_cols=56 Identities=13% Similarity=0.152 Sum_probs=41.4
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHH
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFD 240 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nid 240 (466)
|..|..|.+.+.+-+.++|++.|+++ +.-+...++.+. .+++.+-++.|.|.....
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~~~~~~l~----~v~v~~v~~~P~g~~~~~ 70 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCVN----PYHVKLASSIAK----KVKVCCVIGFPLGLNKTS 70 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHCS----SSEEEEEESTTTCCSCHH
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEC----HHHHHHHHHHhc----CCceeeEecCCCCccchh
Confidence 66788888888666678999998855 566777777663 578888888777765444
No 63
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=64.87 E-value=17 Score=35.44 Aligned_cols=94 Identities=12% Similarity=0.133 Sum_probs=57.9
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEee---cCHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKV---ENLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKI---E~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.+ ++...+..+.+++||+-+ -+.++++.....-+. +|++|+..-.+.
T Consensus 43 ~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 122 (304)
T 3l21_A 43 NHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYS 122 (304)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 67788999998774 2223343333 344444556789999988 345555555555444 799999865543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
- .+.+.+...-+.|. .+.+.|+++-
T Consensus 123 ~-~s~~~l~~~f~~va---~a~~lPiilY 147 (304)
T 3l21_A 123 K-PPQRGLQAHFTAVA---DATELPMLLY 147 (304)
T ss_dssp C-CCHHHHHHHHHHHH---TSCSSCEEEE
T ss_pred C-CCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 2 23445544444444 4458999975
No 64
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=64.51 E-value=7 Score=40.18 Aligned_cols=102 Identities=12% Similarity=0.102 Sum_probs=60.3
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCC-hh--------------------hHHHHHHHHHhcCCCceEEEe--ecCH
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRK-GS--------------------DLVEVRNLLRVHAKNILLMSK--VENL 233 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~s-a~--------------------dv~~~r~~l~~~~~~~~IiaK--IE~~ 233 (466)
|.+++.|..++.+.+.+.|+|+|.++--.. .. .++.++++-...+.++.||+- |.+.
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~ 357 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSG 357 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 567877788886778899999999985221 11 123344433333456888873 4444
Q ss_pred HHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCC
Q 012335 234 EGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKP 282 (466)
Q Consensus 234 ~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkP 282 (466)
+-+ .+-|..=+|+|+|+|+=+.- |+.-+..+.+.+...+.+.|..
T Consensus 358 eDa--~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~~ 402 (415)
T 3i65_A 358 LDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 402 (415)
T ss_dssp HHH--HHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTCS
T ss_pred HHH--HHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCCC
Confidence 333 22233338999999986532 2334445556666666666643
No 65
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=64.41 E-value=23 Score=30.63 Aligned_cols=48 Identities=15% Similarity=0.209 Sum_probs=30.3
Q ss_pred EEecCCCEEEEEeCCCCCCCccEEeecch-------hhhhccCCCCEEEEeCC----eEEEEEEEE
Q 012335 90 IQLVQGQEITISTDYSLKGDEKMISMSYK-------KLAEDLRPGSVILCSDG----TISLTVLDC 144 (466)
Q Consensus 90 i~l~~G~~v~l~~~~~~~~~~~~i~v~~~-------~~~~~v~~Gd~i~iddG----~i~l~V~~v 144 (466)
|..+.|..+++|.+- .|++... -+.++|++||.|++.|| ...-+|.++
T Consensus 58 I~t~~g~~L~lTp~H-------~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v 116 (145)
T 1at0_A 58 LHTDGGAVLTVTPAH-------LVSVWQPESQKLTFVFADRIEEKNQVLVRDVETGELRPQRVVKV 116 (145)
T ss_dssp EEETTSCEEEECTTC-------EEEEEETTTTEEEEEEGGGCCTTCEEEEECTTTCCEEEEEEEEE
T ss_pred EEECCCCEEEEeCCC-------EEEEecCCCCcEEEEEHHHCcCCCEEEEecCCCCCEEEEEEEEE
Confidence 455667777777652 2333221 36788999999999987 233445554
No 66
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=63.62 E-value=30 Score=33.32 Aligned_cols=95 Identities=11% Similarity=0.016 Sum_probs=60.7
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.+ ++...+..+.+++||+-+=+ .++++....--+. +|++|+..-.+.
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 107 (289)
T 2yxg_A 28 NFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYN 107 (289)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 67788999999763 3344444433 34444455568999999844 6666666555554 799999765543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
- .+.+.+...-+.|. .+.+.|+++--
T Consensus 108 ~-~s~~~l~~~f~~ia---~a~~lPiilYn 133 (289)
T 2yxg_A 108 K-PTQEGLRKHFGKVA---ESINLPIVLYN 133 (289)
T ss_dssp C-CCHHHHHHHHHHHH---HHCSSCEEEEE
T ss_pred C-CCHHHHHHHHHHHH---HhcCCCEEEEe
Confidence 2 24456555555554 45589999753
No 67
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=63.06 E-value=20 Score=35.00 Aligned_cols=55 Identities=7% Similarity=0.019 Sum_probs=42.2
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHh
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVA 237 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~ 237 (466)
|..|+.|++.+.+-+.+.|+..|+++ +..|..+++.|. +.+++|.+=|=-|.|-.
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~--~s~V~V~tVigFP~G~~ 123 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQ--GTQVGVTCVIGFHEGTY 123 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTT--TSSCEEEEEESTTTSCS
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcC--CCCCeEEEEeCCCCCCC
Confidence 56788888877677888999999987 778999999884 34678877776555433
No 68
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=63.05 E-value=9.9 Score=38.19 Aligned_cols=45 Identities=24% Similarity=0.429 Sum_probs=34.4
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Q 012335 13 IVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRT 59 (466)
Q Consensus 13 Ii~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~ 59 (466)
+.+-+|... .+.++.++++|++++-||++||..+.+.+.++.+|+
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~ 142 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 142 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH
Confidence 455556543 889999999999999999999987765555555554
No 69
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=63.02 E-value=31 Score=33.53 Aligned_cols=95 Identities=16% Similarity=0.169 Sum_probs=60.9
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHHH-HHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVEV-RNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~~-r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.++ +...+..+.+++||+-+=+ .++++....--+. +|++|+..-.+.
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 119 (301)
T 1xky_A 40 NYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYN 119 (301)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 67789999999863 33444444443 4444455668999999843 6677666666554 799999765543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
- .+.+.+...-+.| |.+.+.|+++--
T Consensus 120 ~-~s~~~l~~~f~~v---a~a~~lPiilYn 145 (301)
T 1xky_A 120 K-PSQEGMYQHFKAI---AESTPLPVMLYN 145 (301)
T ss_dssp C-CCHHHHHHHHHHH---HHTCSSCEEEEE
T ss_pred C-CCHHHHHHHHHHH---HHhcCCCEEEEe
Confidence 2 2445555555555 445689999753
No 70
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=62.86 E-value=40 Score=32.68 Aligned_cols=98 Identities=11% Similarity=0.147 Sum_probs=62.0
Q ss_pred HHHhccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCC
Q 012335 186 DILNWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARG 254 (466)
Q Consensus 186 di~~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRg 254 (466)
.+.+|.++.|+|++++. +.-|.++=.+ ++...+..+.+++||+-+=+ .++++....--+. +|++|+-+-
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33377888999999863 3344444444 34444455668999999843 6666666665554 799999765
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 255 DLGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 255 DLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
.+.- .+.+.+...-+.|. .+.+.|+++--
T Consensus 121 ~y~~-~~~~~l~~~f~~ia---~a~~lPiilYn 149 (304)
T 3cpr_A 121 YYSK-PSQEGLLAHFGAIA---AATEVPICLYD 149 (304)
T ss_dssp CSSC-CCHHHHHHHHHHHH---HHCCSCEEEEE
T ss_pred CCCC-CCHHHHHHHHHHHH---HhcCCCEEEEe
Confidence 5422 23455555555554 45589998743
No 71
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=62.56 E-value=21 Score=35.02 Aligned_cols=94 Identities=11% Similarity=0.123 Sum_probs=58.6
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.+ ++...+..+.+++||+-+= +.++++.....-+. +|++|+-.-.+.
T Consensus 50 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~ 129 (315)
T 3si9_A 50 EWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYN 129 (315)
T ss_dssp HHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 67789999999753 2223333333 4444455566899999884 45566555555554 799998765543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
-.+.+.+...-+.|.+ +.+.|+++-
T Consensus 130 -~~~~~~l~~~f~~va~---a~~lPiilY 154 (315)
T 3si9_A 130 -RPNQRGLYTHFSSIAK---AISIPIIIY 154 (315)
T ss_dssp -CCCHHHHHHHHHHHHH---HCSSCEEEE
T ss_pred -CCCHHHHHHHHHHHHH---cCCCCEEEE
Confidence 2244555555555554 458999975
No 72
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=62.48 E-value=9 Score=38.82 Aligned_cols=49 Identities=16% Similarity=0.321 Sum_probs=38.7
Q ss_pred eEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Q 012335 11 TKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRT 59 (466)
Q Consensus 11 tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~ 59 (466)
..+.+.+|+.....+.++.++++|++++=||++||+++...+.++.+|+
T Consensus 142 ~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~ 190 (404)
T 1eep_A 142 LRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKT 190 (404)
T ss_dssp BCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHH
T ss_pred ceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHH
Confidence 3467777765556788899999999999999999988766666666664
No 73
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=62.14 E-value=57 Score=30.33 Aligned_cols=127 Identities=12% Similarity=0.062 Sum_probs=77.6
Q ss_pred cHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEee-------cC----HHHHhcHHHHHhc-----C
Q 012335 183 DKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKV-------EN----LEGVANFDDVLAN-----S 246 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKI-------E~----~~av~nideI~~~-----s 246 (466)
+.++..+++.+.|+|+|=+.+....+++.++++.+.+.|-.+..+.-- .+ .++++.+...++. +
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa 118 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGS 118 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 444433778899999999998877889999999998876443322210 01 2455666666655 3
Q ss_pred CeeEEeCCcccC--cCC-----chhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHhh
Q 012335 247 DAFMVARGDLGM--EIP-----IEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAA 311 (466)
Q Consensus 247 DgImiaRgDLg~--e~~-----~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naa 311 (466)
+.|.+..|.-.. ..| ++.+...-+++...|.++|..+.+=+ +..+..+...|-.++-++....
T Consensus 119 ~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~--~~~~~~~~~~~~~~~~~ll~~v 188 (287)
T 3kws_A 119 TGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEP--LNRKECFYLRQVADAASLCRDI 188 (287)
T ss_dssp SEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECC--CCTTTCSSCCCHHHHHHHHHHH
T ss_pred CEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe--cCcccCcccCCHHHHHHHHHHc
Confidence 567665442211 122 24555566788888888998765422 2222234456777777776653
No 74
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=61.77 E-value=27 Score=33.14 Aligned_cols=55 Identities=11% Similarity=0.114 Sum_probs=42.2
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHh
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVA 237 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~ 237 (466)
|..|+.|++.+.+-+.++|+..|+++ +..+..+++.|. |.+++|.+=|=-|.|-.
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~--~s~v~v~tVigFP~G~~ 92 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK--GTGVKVCTVIGFPLGAT 92 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT--TSSCEEEEEESTTTCCS
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC--CCCCeEEEEeccCCCCC
Confidence 66788888877677888999999986 678888999884 45678777775555443
No 75
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=61.63 E-value=32 Score=33.96 Aligned_cols=97 Identities=13% Similarity=0.128 Sum_probs=61.9
Q ss_pred HHHhccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCC
Q 012335 186 DILNWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARG 254 (466)
Q Consensus 186 di~~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRg 254 (466)
.+.+|.++.|+|+|++. +.-|.++=.+ ++...+..+.+++||+-+=+ .++++....--+. +||+|+..-
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33377889999999863 3344444433 44444455668999998843 6666666555554 799999765
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 255 DLGMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 255 DLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
.+.- .+.+.+...-+.|. .+.+.|+++-
T Consensus 139 ~Y~~-~s~~~l~~~f~~VA---~a~~lPiilY 166 (332)
T 2r8w_A 139 SYTP-LTQEEAYHHFAAVA---GATALPLAIY 166 (332)
T ss_dssp CSSC-CCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 5432 34456555555554 4568999974
No 76
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=61.55 E-value=30 Score=33.85 Aligned_cols=95 Identities=16% Similarity=0.088 Sum_probs=57.1
Q ss_pred hccCcCCCcEEEEcC------CCChhhHHH-HHHHHHhcCCCceEEEeec--CHHHHhcHHHHHhc-CCeeEEeCCcccC
Q 012335 189 NWGVPNKIDMIALSF------VRKGSDLVE-VRNLLRVHAKNILLMSKVE--NLEGVANFDDVLAN-SDAFMVARGDLGM 258 (466)
Q Consensus 189 ~~~~~~~~d~v~~sf------V~sa~dv~~-~r~~l~~~~~~~~IiaKIE--~~~av~nideI~~~-sDgImiaRgDLg~ 258 (466)
+|.++.|+|++++.- .-|.++=.+ ++...+..+.+++||+-+= +.++++......+. +|++|+-.-.. .
T Consensus 40 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y-~ 118 (316)
T 3e96_A 40 DRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIH-P 118 (316)
T ss_dssp HHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCC-S
T ss_pred HHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCC-C
Confidence 677899999997642 223333333 3444455567899999983 23333333333333 69999974443 2
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 259 EIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 259 e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
..+.+.+...-+.|.+++ +.|+++--
T Consensus 119 ~~s~~~l~~~f~~va~a~---~lPiilYn 144 (316)
T 3e96_A 119 YVTAGGVYAYFRDIIEAL---DFPSLVYF 144 (316)
T ss_dssp CCCHHHHHHHHHHHHHHH---TSCEEEEE
T ss_pred CCCHHHHHHHHHHHHHhC---CCCEEEEe
Confidence 234566666666666655 69999864
No 77
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=60.25 E-value=28 Score=33.69 Aligned_cols=95 Identities=11% Similarity=0.149 Sum_probs=60.9
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHHH-HHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVEV-RNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~~-r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.++ +...+..+.+++||+-+=+ .++++.....-+. +|++|+..-.+.
T Consensus 28 ~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 107 (297)
T 2rfg_A 28 DWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYN 107 (297)
T ss_dssp HHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTT
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 67789999999763 33444444443 4444445567899999844 6666666655554 799999765543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
- .+.+.+...-+.|. .+.+.|+++--
T Consensus 108 ~-~s~~~l~~~f~~va---~a~~lPiilYn 133 (297)
T 2rfg_A 108 R-PSQEGLYQHFKMVH---DAIDIPIIVYN 133 (297)
T ss_dssp C-CCHHHHHHHHHHHH---HHCSSCEEEEE
T ss_pred C-CCHHHHHHHHHHHH---HhcCCCEEEEe
Confidence 2 24455555555554 45589999753
No 78
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=60.22 E-value=27 Score=34.63 Aligned_cols=98 Identities=7% Similarity=0.019 Sum_probs=62.0
Q ss_pred HHHhccCcCCCcEEEEc------CCCChhhHHHH-HHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCC
Q 012335 186 DILNWGVPNKIDMIALS------FVRKGSDLVEV-RNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-SDAFMVARG 254 (466)
Q Consensus 186 di~~~~~~~~~d~v~~s------fV~sa~dv~~~-r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-sDgImiaRg 254 (466)
.+.+|.++.|+|+|++. +.-|.++=.++ +...+..+.+++||+-+= +.++++......+. +|++|+..-
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33367789999998763 33444444443 444445566899999984 46666666655554 799999765
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 255 DLGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 255 DLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
.+.- .+.+.+...-+.|. .+.+.|+++--
T Consensus 136 ~Y~~-~s~~~l~~~f~~VA---~a~~lPiilYn 164 (343)
T 2v9d_A 136 YYWK-VSEANLIRYFEQVA---DSVTLPVMLYN 164 (343)
T ss_dssp SSSC-CCHHHHHHHHHHHH---HTCSSCEEEEE
T ss_pred CCCC-CCHHHHHHHHHHHH---HhcCCCEEEEe
Confidence 5422 24455555555554 45689999753
No 79
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=59.23 E-value=35 Score=33.47 Aligned_cols=95 Identities=9% Similarity=0.030 Sum_probs=58.4
Q ss_pred hccCcCCCcEEEEcC------CCChhh-HHHHHHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCcc-
Q 012335 189 NWGVPNKIDMIALSF------VRKGSD-LVEVRNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGDL- 256 (466)
Q Consensus 189 ~~~~~~~~d~v~~sf------V~sa~d-v~~~r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgDL- 256 (466)
+|.++.|+|++++.- .-|.++ .+-++...+..+.+++||+-+= +.++++.....-+. +|++|+-.-.+
T Consensus 39 ~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 39 AYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYF 118 (318)
T ss_dssp HHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC-
T ss_pred HHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 677899999987642 223333 3334444455567899999883 45555555555444 79999976533
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 257 GMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 257 g~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
.-....+.+...-+.|.+ +.+.|+++-
T Consensus 119 ~kp~~~~~l~~~f~~ia~---a~~lPiilY 145 (318)
T 3qfe_A 119 GKATTPPVIKSFFDDVSC---QSPLPVVIY 145 (318)
T ss_dssp --CCCHHHHHHHHHHHHH---HCSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHh---hCCCCEEEE
Confidence 222334555555555554 458999975
No 80
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=59.22 E-value=34 Score=33.00 Aligned_cols=94 Identities=11% Similarity=0.134 Sum_probs=59.5
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++.+. +.-|.++=.+ ++...+..+.+++||+-+=+ .++++....--+. +|++|+..-.+.
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 107 (292)
T 2vc6_A 28 EWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYN 107 (292)
T ss_dssp HHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 67788999999763 3344444433 44444455567899998843 6666666555554 799999765542
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
- .+.+.+...-+.| |.+.+.|+++-
T Consensus 108 ~-~s~~~l~~~f~~i---a~a~~lPiilY 132 (292)
T 2vc6_A 108 K-PTQEGIYQHFKAI---DAASTIPIIVY 132 (292)
T ss_dssp C-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred C-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 2 2445555555555 44568999974
No 81
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=58.98 E-value=13 Score=30.60 Aligned_cols=41 Identities=27% Similarity=0.381 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhcCCCCCEEEE
Q 012335 338 LASSAVRTANCIKAALILVLTRG---------GTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 338 ia~~av~~a~~~~a~~Ivv~T~s---------G~ta~~vSk~RP~~PIiAv 379 (466)
.+...++.|.+.+++.||+-++. |+++..+.+.-| |||+.+
T Consensus 98 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 147 (147)
T 3hgm_A 98 PSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAH-CPVLVV 147 (147)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCS-SCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCC-CCEEEC
Confidence 34455667889999999987752 778888888776 999864
No 82
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=58.68 E-value=39 Score=32.68 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=58.3
Q ss_pred hccCcCCCcEEEEcCC------CChhhHHH-HHHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALSFV------RKGSDLVE-VRNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV------~sa~dv~~-~r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++.-. -|.++=.+ ++...+..+.+++||+-+= +.++++.....-+. +|++|+..-.+.
T Consensus 35 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 114 (297)
T 3flu_A 35 DWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYN 114 (297)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 6778999999987422 23333333 3334444566899999884 45566655555554 799998765543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
- .+.+.+...-+.|. .+.+.|+++-
T Consensus 115 ~-~~~~~l~~~f~~va---~a~~lPiilY 139 (297)
T 3flu_A 115 K-PSQEGIYQHFKTIA---EATSIPMIIY 139 (297)
T ss_dssp C-CCHHHHHHHHHHHH---HHCCSCEEEE
T ss_pred C-CCHHHHHHHHHHHH---HhCCCCEEEE
Confidence 2 23455555555554 4458999975
No 83
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=58.57 E-value=33 Score=33.41 Aligned_cols=95 Identities=8% Similarity=0.089 Sum_probs=60.7
Q ss_pred hccCcCCCcEEEE------cCCCChhhHHHH-HHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIAL------SFVRKGSDLVEV-RNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~------sfV~sa~dv~~~-r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++ ++.-|.++=.++ +...+..+.+++||+-+=+ .++++....--+. +|++|+..-.+.
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~ 119 (306)
T 1o5k_A 40 RYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYN 119 (306)
T ss_dssp HHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 6778899999987 334455444444 4444455668999999843 6666666555544 799999765543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
- .+.+.+...-+.| |.+.+.|+++--
T Consensus 120 ~-~s~~~l~~~f~~v---a~a~~lPiilYn 145 (306)
T 1o5k_A 120 K-PTQEGLYQHYKYI---SERTDLGIVVYN 145 (306)
T ss_dssp C-CCHHHHHHHHHHH---HTTCSSCEEEEE
T ss_pred C-CCHHHHHHHHHHH---HHhCCCCEEEEe
Confidence 2 2445555555555 445589998753
No 84
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=58.38 E-value=11 Score=39.38 Aligned_cols=50 Identities=16% Similarity=0.249 Sum_probs=39.6
Q ss_pred eEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Q 012335 11 TKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTA 60 (466)
Q Consensus 11 tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~ 60 (466)
..+.+.+|......+.++.++++|++++=||++||.+....+.++.+|+.
T Consensus 244 l~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 244 LLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp BCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred eeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 34556677766678899999999999999999999887666666666653
No 85
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=58.13 E-value=43 Score=29.84 Aligned_cols=59 Identities=12% Similarity=0.226 Sum_probs=41.5
Q ss_pred EecCCCEEEEEeC----CCCCCCccEEeecchhhhh--ccCCCCEEEEe--CCeEEEEEEEEecCCCeE
Q 012335 91 QLVQGQEITISTD----YSLKGDEKMISMSYKKLAE--DLRPGSVILCS--DGTISLTVLDCAKELGLV 151 (466)
Q Consensus 91 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~--~v~~Gd~i~id--dG~i~l~V~~v~~~~~~i 151 (466)
-.+.|++.+|+.. |...+.+....++-..|.. .+++|+.+.+. +|.+..+|++++ ++.+
T Consensus 51 Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~--~~~V 117 (171)
T 2k8i_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVE--DDHV 117 (171)
T ss_dssp TCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEEC--SSEE
T ss_pred CCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEc--CCEE
Confidence 3678999988765 2233445566677777764 58999999997 577667788885 4444
No 86
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=57.97 E-value=41 Score=32.33 Aligned_cols=94 Identities=13% Similarity=0.196 Sum_probs=58.0
Q ss_pred hccCcCCCcEEEEcCCC------ChhhHHH-HHHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALSFVR------KGSDLVE-VRNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~------sa~dv~~-~r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++.+.-.. |.++=.+ ++...+..+.+++||+-+= +.++++.....-+. +|++|+..-.+.
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 108 (291)
T 3tak_A 29 EWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYN 108 (291)
T ss_dssp HHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 67788999998764321 2233323 3333444556799999883 45556555555444 799999865543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
..+.+.+...-+.|.+ +.+.|+++-
T Consensus 109 -~~~~~~l~~~f~~ia~---a~~lPiilY 133 (291)
T 3tak_A 109 -KPTQEGLYQHYKAIAE---AVELPLILY 133 (291)
T ss_dssp -CCCHHHHHHHHHHHHH---HCCSCEEEE
T ss_pred -CCCHHHHHHHHHHHHH---hcCCCEEEE
Confidence 2344565555555554 458999975
No 87
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=57.45 E-value=22 Score=29.14 Aligned_cols=41 Identities=37% Similarity=0.501 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhcCCCCCEEEE
Q 012335 338 LASSAVRTANCIKAALILVLTRG---------GTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 338 ia~~av~~a~~~~a~~Ivv~T~s---------G~ta~~vSk~RP~~PIiAv 379 (466)
.+...++.|.+.++++||+-++. |+++..+.+.-| |||+.+
T Consensus 87 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 136 (137)
T 2z08_A 87 PAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAP-CPVLLV 136 (137)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcCC-CCEEEe
Confidence 44555677889999999998763 678888888764 999987
No 88
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=57.38 E-value=14 Score=38.89 Aligned_cols=50 Identities=12% Similarity=0.290 Sum_probs=40.5
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Q 012335 10 KTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRT 59 (466)
Q Consensus 10 ~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~ 59 (466)
+..+-+.+|+.....+.++.|+++|+++.=+|.+||..+...++++.+|+
T Consensus 244 rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 244 RLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH
Confidence 45567778888778899999999999999999999987776666655554
No 89
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=56.43 E-value=15 Score=38.48 Aligned_cols=50 Identities=18% Similarity=0.302 Sum_probs=40.2
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Q 012335 10 KTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRT 59 (466)
Q Consensus 10 ~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~ 59 (466)
+..+-+.+|..-...+.++.|+++|++++=||.+||......+.++.+|+
T Consensus 217 rl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~ 266 (490)
T 4avf_A 217 RLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQ 266 (490)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHH
T ss_pred cceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHH
Confidence 45556677877778899999999999999999999987766666666654
No 90
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=56.05 E-value=37 Score=33.25 Aligned_cols=88 Identities=11% Similarity=0.174 Sum_probs=52.9
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-CCeeEE-eCCcccCcCC-chhH
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-SDAFMV-ARGDLGMEIP-IEKI 265 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-sDgImi-aRgDLg~e~~-~e~v 265 (466)
+.+.+.|+|+|.+++=...+.++.+++ . .++++.++.+.+-... +.+. +|+|.+ ++ +-|-..+ ...+
T Consensus 82 ~~a~~~g~d~V~~~~g~p~~~i~~l~~----~--g~~v~~~v~~~~~a~~---~~~~GaD~i~v~g~-~~GG~~g~~~~~ 151 (332)
T 2z6i_A 82 DLVIEEGVKVVTTGAGNPSKYMERFHE----A--GIIVIPVVPSVALAKR---MEKIGADAVIAEGM-EAGGHIGKLTTM 151 (332)
T ss_dssp HHHHHTTCSEEEECSSCGGGTHHHHHH----T--TCEEEEEESSHHHHHH---HHHTTCSCEEEECT-TSSEECCSSCHH
T ss_pred HHHHHCCCCEEEECCCChHHHHHHHHH----c--CCeEEEEeCCHHHHHH---HHHcCCCEEEEECC-CCCCCCCCccHH
Confidence 566889999999998655555555554 2 5899999988765433 3333 799999 43 2221112 1111
Q ss_pred HHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 266 FLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 266 ~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
..-+++ ....+.|||.+.-+-
T Consensus 152 -~ll~~i---~~~~~iPViaaGGI~ 172 (332)
T 2z6i_A 152 -TLVRQV---ATAISIPVIAAGGIA 172 (332)
T ss_dssp -HHHHHH---HHHCSSCEEEESSCC
T ss_pred -HHHHHH---HHhcCCCEEEECCCC
Confidence 111222 223589999987643
No 91
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=55.48 E-value=36 Score=32.63 Aligned_cols=57 Identities=14% Similarity=0.122 Sum_probs=43.3
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcH
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANF 239 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~ni 239 (466)
|..|+.|++.+.+-+.+.|+..|+++ +.-+..+++.|. |.+++|.+=|=-|.|-...
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~--gs~v~v~tVigFP~G~~~~ 110 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE--GTDVKVVTVVGFPLGANET 110 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT--TSCCEEEEEESTTTCCSCH
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc--CCCCeEEEEecCCCCCCcH
Confidence 56688888877677888999999986 778888899884 4568888877666555433
No 92
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=55.31 E-value=34 Score=33.45 Aligned_cols=95 Identities=7% Similarity=0.058 Sum_probs=58.6
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEeec--CHHHHhcHHHHHhc-CCeeEEeCCcccC
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKVE--NLEGVANFDDVLAN-SDAFMVARGDLGM 258 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKIE--~~~av~nideI~~~-sDgImiaRgDLg~ 258 (466)
+|.++.|+|++.+. +.-|.++=.+ ++...+..+.+++||+-+= +.++++.....-+. +|++|+..-.+.-
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y~~ 119 (314)
T 3d0c_A 40 EFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVHPY 119 (314)
T ss_dssp HHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCCSC
T ss_pred HHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCC
Confidence 67789999999763 2344444433 4444555566899999885 34455444444443 7999997654421
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 259 EIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 259 e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
.+.+.+...-+.| |.+.+.|+++--
T Consensus 120 -~s~~~l~~~f~~v---a~a~~lPiilYn 144 (314)
T 3d0c_A 120 -ITDAGAVEYYRNI---IEALDAPSIIYF 144 (314)
T ss_dssp -CCHHHHHHHHHHH---HHHSSSCEEEEE
T ss_pred -CCHHHHHHHHHHH---HHhCCCCEEEEe
Confidence 2345555555555 445689999854
No 93
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=55.31 E-value=55 Score=31.84 Aligned_cols=92 Identities=10% Similarity=-0.016 Sum_probs=57.6
Q ss_pred hccCcCCCcEEEEc------CCCChhhHH-HHHHHHHhcCCCceEEEee---cCHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLV-EVRNLLRVHAKNILLMSKV---ENLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~-~~r~~l~~~~~~~~IiaKI---E~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|+|++. +.-|.++=. -++..++.. .+++||+-+ -+.++++......+. +|++|+-+-..
T Consensus 36 ~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~- 113 (313)
T 3dz1_A 36 DFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPS- 113 (313)
T ss_dssp HHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTT-
T ss_pred HHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCC-
Confidence 68889999999874 223333333 344445555 689999988 345556555555544 79999976542
Q ss_pred CcCCchhHHHHHHHHHHHHHHcC--CCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQG--KPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~g--kPvi~A 286 (466)
-.+.+.+...-+.|.+ +.+ .|+++-
T Consensus 114 -~~s~~~l~~~f~~va~---a~~~~lPiilY 140 (313)
T 3dz1_A 114 -LRTDEQITTYFRQATE---AIGDDVPWVLQ 140 (313)
T ss_dssp -CCSHHHHHHHHHHHHH---HHCTTSCEEEE
T ss_pred -CCCHHHHHHHHHHHHH---hCCCCCcEEEE
Confidence 2344555555555544 446 999875
No 94
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=55.23 E-value=34 Score=33.48 Aligned_cols=94 Identities=16% Similarity=0.086 Sum_probs=59.2
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.+ ++...+..+.+++||+-+= +.++++.....-+. +|++|+..-.+.
T Consensus 52 ~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 131 (315)
T 3na8_A 52 ERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYW 131 (315)
T ss_dssp HHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 67789999999753 2223333333 3444445566799999884 45666666555555 799999765543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
- .+.+.+...-+.|. .+.+.|+++-
T Consensus 132 ~-~s~~~l~~~f~~va---~a~~lPiilY 156 (315)
T 3na8_A 132 K-LNEAEVFQHYRAVG---EAIGVPVMLY 156 (315)
T ss_dssp C-CCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred C-CCHHHHHHHHHHHH---HhCCCcEEEE
Confidence 2 34455555555554 4457999974
No 95
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=54.05 E-value=1.1e+02 Score=29.71 Aligned_cols=129 Identities=12% Similarity=0.093 Sum_probs=73.5
Q ss_pred CCChhcHHHHHhccCcCCCcEEEEcC-CCC-----hhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-CCeeE
Q 012335 178 TLTEKDKEDILNWGVPNKIDMIALSF-VRK-----GSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-SDAFM 250 (466)
Q Consensus 178 ~lte~D~~di~~~~~~~~~d~v~~sf-V~s-----a~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-sDgIm 250 (466)
.++..|+..|.+...+.|+|+|=+.| +.+ -.|..++...+.+. .+.++.+-..+.++++. .+++ .|.|.
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~i~~---a~~~g~~~v~ 99 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-KGVTYAALVPNQRGLEN---ALEGGINEAC 99 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEECCSHHHHHH---HHHHTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc-CCCeEEEEeCCHHhHHH---HHhCCcCEEE
Confidence 46777777775677789999998864 332 13555554444432 46667666655544433 3332 56444
Q ss_pred --EeCCcc----cCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh
Q 012335 251 --VARGDL----GMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 310 (466)
Q Consensus 251 --iaRgDL----g~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na 310 (466)
++-.|+ -.....++.....+++++.++++|+.|-..=-+-=+-....+-+..++.+++.+
T Consensus 100 i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (307)
T 1ydo_A 100 VFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEA 165 (307)
T ss_dssp EEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHH
T ss_pred EEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHH
Confidence 343443 223455777778889999999999987532100000001123455666666665
No 96
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=54.03 E-value=97 Score=30.99 Aligned_cols=103 Identities=20% Similarity=0.233 Sum_probs=59.4
Q ss_pred hcHHHHHhccCcCCCcEEEE--cCCCChhhHHHHHHHHHhcCCCceEEE-eecCHHHHhcHHHHHhcCCeeEEeCCcccC
Q 012335 182 KDKEDILNWGVPNKIDMIAL--SFVRKGSDLVEVRNLLRVHAKNILLMS-KVENLEGVANFDDVLANSDAFMVARGDLGM 258 (466)
Q Consensus 182 ~D~~di~~~~~~~~~d~v~~--sfV~sa~dv~~~r~~l~~~~~~~~Iia-KIE~~~av~nideI~~~sDgImiaRgDLg~ 258 (466)
.+.+.+ +.+++.|+|+|.+ ++-.+..-++.++.+- +...++.+++ .+-+++....+.+ .=+|+|.++-|. |-
T Consensus 108 ~~~~~~-~~lieaGvd~I~idta~G~~~~~~~~I~~ik-~~~p~v~Vi~G~v~t~e~A~~a~~--aGAD~I~vG~gp-Gs 182 (366)
T 4fo4_A 108 GNEERV-KALVEAGVDVLLIDSSHGHSEGVLQRIRETR-AAYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGP-GS 182 (366)
T ss_dssp TCHHHH-HHHHHTTCSEEEEECSCTTSHHHHHHHHHHH-HHCTTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSC-ST
T ss_pred hHHHHH-HHHHhCCCCEEEEeCCCCCCHHHHHHHHHHH-HhcCCCceEeeeeCCHHHHHHHHH--cCCCEEEEecCC-CC
Confidence 344555 5678899999987 5555554444454433 3334577766 4777766554433 238999995221 11
Q ss_pred c--------CCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 259 E--------IPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 259 e--------~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
. .+.+.+ ..-..+.+.|+..+.|||-+.-+-
T Consensus 183 ~~~tr~~~g~g~p~~-~~l~~v~~~~~~~~iPVIA~GGI~ 221 (366)
T 4fo4_A 183 ICTTRIVTGVGVPQI-TAIADAAGVANEYGIPVIADGGIR 221 (366)
T ss_dssp TBCHHHHHCCCCCHH-HHHHHHHHHHGGGTCCEEEESCCC
T ss_pred CCCcccccCcccchH-HHHHHHHHHHhhcCCeEEEeCCCC
Confidence 1 122222 223445566667899999876543
No 97
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=53.68 E-value=30 Score=33.40 Aligned_cols=94 Identities=10% Similarity=0.056 Sum_probs=58.6
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.+ ++...+..+.+++||+-+=+ .++++.....-+. +|++|+..-.+.
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 108 (292)
T 2ojp_A 29 DYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYN 108 (292)
T ss_dssp HHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 67788999999863 3344444444 34444455668899999844 5555555444443 699999765542
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
- .+.+.+...-+.|. .+.+.|+++-
T Consensus 109 ~-~s~~~l~~~f~~ia---~a~~lPiilY 133 (292)
T 2ojp_A 109 R-PSQEGLYQHFKAIA---EHTDLPQILY 133 (292)
T ss_dssp C-CCHHHHHHHHHHHH---TTCSSCEEEE
T ss_pred C-CCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 2 24455555555554 4558999874
No 98
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=53.62 E-value=45 Score=30.83 Aligned_cols=43 Identities=12% Similarity=0.043 Sum_probs=31.3
Q ss_pred ChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCC
Q 012335 180 TEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKN 223 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~ 223 (466)
.+.+.++..+.+.+.|+|+|=+.+- ...++.++++.+.+.|-.
T Consensus 21 ~~~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~ 63 (269)
T 3ngf_A 21 NEVPFLERFRLAAEAGFGGVEFLFP-YDFDADVIARELKQHNLT 63 (269)
T ss_dssp TTSCHHHHHHHHHHTTCSEEECSCC-TTSCHHHHHHHHHHTTCE
T ss_pred ccCCHHHHHHHHHHcCCCEEEecCC-ccCCHHHHHHHHHHcCCc
Confidence 3344444447788999999988763 456899999999887643
No 99
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=53.62 E-value=29 Score=31.28 Aligned_cols=64 Identities=9% Similarity=0.052 Sum_probs=40.6
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEe--ecCHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSK--VENLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaK--IE~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
..+.+.|+|+|.+ |-.....+..++++......+++|+|- | ..+|+.+++++ +||+.++++=+.
T Consensus 115 ~~a~~~G~d~v~v-~~t~~~g~~~~~~l~~~~~~~ipvia~GGI----~~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 115 FTALEAGAQALKI-FPSSAFGPQYIKALKAVLPSDIAVFAVGGV----TPENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp HHHHHTTCSEEEE-TTHHHHCHHHHHHHHTTSCTTCEEEEESSC----CTTTHHHHHHHTCSEEEECTTTCC
T ss_pred HHHHHCCCCEEEE-ecCCCCCHHHHHHHHHhccCCCeEEEeCCC----CHHHHHHHHHcCCCEEEEChHHhC
Confidence 3456799999987 432233455555554433224666652 3 14688888877 899999976554
No 100
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=52.57 E-value=37 Score=31.82 Aligned_cols=117 Identities=11% Similarity=0.032 Sum_probs=64.6
Q ss_pred hccCcCCCcEEEEcCCC----------ChhhHHHHHHHHHhcCCCceEEEe-------ecC------HHHHhcHHHHHhc
Q 012335 189 NWGVPNKIDMIALSFVR----------KGSDLVEVRNLLRVHAKNILLMSK-------VEN------LEGVANFDDVLAN 245 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~----------sa~dv~~~r~~l~~~~~~~~IiaK-------IE~------~~av~nideI~~~ 245 (466)
+.+.+.|+|+|-+.+-. +.+++.++++.+.+.|-.+..+.- +-+ .++++.+...++.
T Consensus 37 ~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~ 116 (295)
T 3cqj_A 37 QLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQF 116 (295)
T ss_dssp HHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 67788999999987654 467788999999987744332220 111 1234455555544
Q ss_pred -----CCeeEEeCCcccCcCC----chhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh
Q 012335 246 -----SDAFMVARGDLGMEIP----IEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 310 (466)
Q Consensus 246 -----sDgImiaRgDLg~e~~----~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na 310 (466)
++.|.+..++-..+.+ ++.+...-+++...|.+.|..+.+ |-+-.+...|-+++.++...
T Consensus 117 A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----En~~~~~~~~~~~~~~l~~~ 185 (295)
T 3cqj_A 117 AQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAM-----EIMDYPLMNSISKALGYAHY 185 (295)
T ss_dssp HHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEE-----ECCSSGGGCSHHHHHHHHHH
T ss_pred HHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEE-----eeCCCcccCCHHHHHHHHHh
Confidence 3555554332111111 233444456666777777765443 32322334555666655554
No 101
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=52.49 E-value=28 Score=29.29 Aligned_cols=41 Identities=22% Similarity=0.226 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhcCCCCCEEEE
Q 012335 338 LASSAVRTANCIKAALILVLTR---------GGTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 338 ia~~av~~a~~~~a~~Ivv~T~---------sG~ta~~vSk~RP~~PIiAv 379 (466)
.+...++.|.+.++++||+-++ -|+++..+.+.-| |||+.+
T Consensus 108 ~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~~-~pVlvv 157 (162)
T 1mjh_A 108 PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSN-KPVLVV 157 (162)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCC-SCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhCC-CCEEEE
Confidence 3445566788999999999886 3678888888764 999999
No 102
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=52.28 E-value=31 Score=33.92 Aligned_cols=57 Identities=16% Similarity=0.240 Sum_probs=36.6
Q ss_pred CCCCCHHHHHHHHHhCCceEEEecCCCCH-------HHHHHHHHHHHHH---HHHcCCceEEEecCCCC
Q 012335 19 PASRSVEMAEKLLRAGMNVARFNFSHGSH-------AYHQETLDNLRTA---MNNTGILCAVMLDTKGP 77 (466)
Q Consensus 19 p~~~~~~~l~~li~~G~~v~RiN~shg~~-------~~~~~~i~~ir~~---~~~~~~~i~i~~Dl~Gp 77 (466)
+...+.+.++.|-+.|+|++||-+++... ......++.++++ +.+.| +.+++|+-..
T Consensus 40 ~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G--i~vildlH~~ 106 (345)
T 3ndz_A 40 NPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND--MYVIINLHHE 106 (345)
T ss_dssp CCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEECCCSC
T ss_pred CCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEecCCc
Confidence 33446899999999999999999886431 0012234444444 33444 5788888753
No 103
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=52.28 E-value=21 Score=29.58 Aligned_cols=40 Identities=33% Similarity=0.446 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCCcEEEEEcCC--------chHHHHHHhcCCCCCEEEE
Q 012335 339 ASSAVRTANCIKAALILVLTRG--------GTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 339 a~~av~~a~~~~a~~Ivv~T~s--------G~ta~~vSk~RP~~PIiAv 379 (466)
+...++.|++.++++||+-++. |+++..+.+.-| |||+.+
T Consensus 98 ~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 145 (150)
T 3tnj_A 98 REEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAK-CDVLAV 145 (150)
T ss_dssp HHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCS-SEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCC-CCEEEE
Confidence 3455567889999999988752 667888878766 999998
No 104
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=52.21 E-value=26 Score=33.24 Aligned_cols=55 Identities=18% Similarity=0.193 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHH-HhCCceEEEecCCC---------CHHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 012335 20 ASRSVEMAEKLL-RAGMNVARFNFSHG---------SHAYHQETLDNLRTAMNNTGILCAVMLDTKG 76 (466)
Q Consensus 20 ~~~~~~~l~~li-~~G~~v~RiN~shg---------~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~G 76 (466)
...+.+.++.|. +.|+|++|+-++.. +++...+.++.+=+.+.+.|. .+++|+-+
T Consensus 37 ~~~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~Gi--~vild~h~ 101 (293)
T 1tvn_A 37 KFYTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAEDM--YVIIDFHS 101 (293)
T ss_dssp GGCSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTTC--EEEEEEEC
T ss_pred CCCCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCCC--EEEEEcCC
Confidence 334688999998 49999999988762 224444455555455556665 46677754
No 105
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=50.94 E-value=33 Score=35.41 Aligned_cols=102 Identities=12% Similarity=0.109 Sum_probs=60.2
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCCh-h--------------------hHHHHHHHHHhcCCCceEEE--eecCH
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRKG-S--------------------DLVEVRNLLRVHAKNILLMS--KVENL 233 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~sa-~--------------------dv~~~r~~l~~~~~~~~Iia--KIE~~ 233 (466)
|.+++.|..++.+.+.+.|+|+|.++--... . .+..++++-...+.+++||+ -|.+.
T Consensus 306 pd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~ 385 (443)
T 1tv5_A 306 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSG 385 (443)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCH
Confidence 3467777777766778899999998863211 0 12333333333344788888 67776
Q ss_pred HHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCC
Q 012335 234 EGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKP 282 (466)
Q Consensus 234 ~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkP 282 (466)
+-. .+-|..=+|+|+++|+=+-- ++.-+..+.+.+-....+.|..
T Consensus 386 ~DA--~e~l~aGAd~Vqigrall~~--gP~l~~~i~~~l~~~l~~~G~~ 430 (443)
T 1tv5_A 386 LDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 430 (443)
T ss_dssp HHH--HHHHHTTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHHTCS
T ss_pred HHH--HHHHHcCCCEEEEcHHHHhc--ChHHHHHHHHHHHHHHHHhCCC
Confidence 544 23333348999999986621 2233344555555555666644
No 106
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=50.45 E-value=45 Score=32.25 Aligned_cols=69 Identities=19% Similarity=0.281 Sum_probs=50.3
Q ss_pred CCeEEEEecCCCCC---------C----HHHHHHHHHhCCceEEEec-CC--C-----CHHHHHHHHHHHHHHHHHcCCc
Q 012335 9 PKTKIVCTLGPASR---------S----VEMAEKLLRAGMNVARFNF-SH--G-----SHAYHQETLDNLRTAMNNTGIL 67 (466)
Q Consensus 9 r~tkIi~TiGp~~~---------~----~~~l~~li~~G~~v~RiN~-sh--g-----~~~~~~~~i~~ir~~~~~~~~~ 67 (466)
.+++|++=|.+.-+ + .+..++|+++|+++.=+|. |- | ..|+..+++..++...++.+.|
T Consensus 13 ~~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~p 92 (282)
T 1aj0_A 13 SHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVW 92 (282)
T ss_dssp TSCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCE
T ss_pred CCCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCe
Confidence 47899998866542 2 2345779999999999998 53 2 1688888888888887777655
Q ss_pred eEEEecCCCCee
Q 012335 68 CAVMLDTKGPEI 79 (466)
Q Consensus 68 i~i~~Dl~Gpki 79 (466)
|.+|+.-|++
T Consensus 93 --iSIDT~~~~v 102 (282)
T 1aj0_A 93 --ISVDTSKPEV 102 (282)
T ss_dssp --EEEECCCHHH
T ss_pred --EEEeCCCHHH
Confidence 5568876654
No 107
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=50.34 E-value=45 Score=32.52 Aligned_cols=94 Identities=12% Similarity=0.073 Sum_probs=60.1
Q ss_pred hccCcCCCcEEEEcC------CCChhhH-HHHHHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-C-CeeEEeCCcc
Q 012335 189 NWGVPNKIDMIALSF------VRKGSDL-VEVRNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-S-DAFMVARGDL 256 (466)
Q Consensus 189 ~~~~~~~~d~v~~sf------V~sa~dv-~~~r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-s-DgImiaRgDL 256 (466)
+|.++.|+|++++.- .-|.++= +-++...+..+.+++||+-+= +.++++.....-+. + |++|+..-.+
T Consensus 35 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y 114 (311)
T 3h5d_A 35 EHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYY 114 (311)
T ss_dssp HHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCC
Confidence 777899999987643 2233333 334444455567899999883 56777777777765 4 9999986554
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 257 GMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 257 g~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
.- .+.+.+...-+.|. .+.+.|+++-
T Consensus 115 ~~-~s~~~l~~~f~~va---~a~~lPiilY 140 (311)
T 3h5d_A 115 NK-PSQEGMYQHFKAIA---DASDLPIIIY 140 (311)
T ss_dssp SC-CCHHHHHHHHHHHH---HSCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHHH---HhCCCCEEEE
Confidence 32 23455554444444 4458999975
No 108
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=50.29 E-value=1.1e+02 Score=32.52 Aligned_cols=114 Identities=16% Similarity=0.154 Sum_probs=72.4
Q ss_pred ChhcHHHHHhccCcCCCcEEEEc--CCCChhhHHHHHHHHHhcCCCceEEE-eecCHHHHhcHHHHHhcCCeeEEeCCcc
Q 012335 180 TEKDKEDILNWGVPNKIDMIALS--FVRKGSDLVEVRNLLRVHAKNILLMS-KVENLEGVANFDDVLANSDAFMVARGDL 256 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~s--fV~sa~dv~~~r~~l~~~~~~~~Iia-KIE~~~av~nideI~~~sDgImiaRgDL 256 (466)
++.+.+-+ ...++.|+|+|++- .-.+ +.+.+..+.+.+...++.||| -+-|.++.++|-+ .=+|+|-||-|-=
T Consensus 279 ~~d~~eR~-~aLv~AGvD~iviD~ahGhs-~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpG 354 (556)
T 4af0_A 279 RPGDKDRL-KLLAEAGLDVVVLDSSQGNS-VYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSG 354 (556)
T ss_dssp SHHHHHHH-HHHHHTTCCEEEECCSCCCS-HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCS
T ss_pred CccHHHHH-HHHHhcCCcEEEEecccccc-HHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHH--cCCCEEeecCCCC
Confidence 45566666 56689999998763 2223 334444455666656777766 8899998876643 3489999987653
Q ss_pred cC-------cCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh
Q 012335 257 GM-------EIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 310 (466)
Q Consensus 257 g~-------e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na 310 (466)
++ -++.+.+- +-....+.|+++|+|+|--.-+=. --||+-|
T Consensus 355 SiCtTr~v~GvG~PQ~t-Ai~~~a~~a~~~~vpvIADGGI~~------------sGDi~KA 402 (556)
T 4af0_A 355 SICITQEVMAVGRPQGT-AVYAVAEFASRFGIPCIADGGIGN------------IGHIAKA 402 (556)
T ss_dssp TTBCCTTTCCSCCCHHH-HHHHHHHHHGGGTCCEEEESCCCS------------HHHHHHH
T ss_pred cccccccccCCCCcHHH-HHHHHHHHHHHcCCCEEecCCcCc------------chHHHHH
Confidence 22 12233332 334566778889999886544332 3677777
No 109
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=50.10 E-value=25 Score=33.13 Aligned_cols=65 Identities=12% Similarity=0.189 Sum_probs=42.6
Q ss_pred CCCCCCCeEEEEecCCCC-CCHHHHHHHHHhCCceEEEecCCCCH-HHHHHHHHHHHHHHHHcCCceEEEe
Q 012335 4 DHQNSPKTKIVCTLGPAS-RSVEMAEKLLRAGMNVARFNFSHGSH-AYHQETLDNLRTAMNNTGILCAVML 72 (466)
Q Consensus 4 ~~~~~r~tkIi~TiGp~~-~~~~~l~~li~~G~~v~RiN~shg~~-~~~~~~i~~ir~~~~~~~~~i~i~~ 72 (466)
.|..++..+-+.-.=|.- .+.+.++.|.++|.|+.=+-.|+|.. +...++++.+| + ++.|+.+|.
T Consensus 2 ~~~~~~~~~~it~gDP~~~~t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir---~-~~~Pivl~~ 68 (234)
T 2f6u_A 2 SHMRWRKWRHITKLDPDRTNTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVS---Q-YGLPIVVEP 68 (234)
T ss_dssp --CCGGGCCEEEEECTTSCCCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHT---T-SCCCEEECC
T ss_pred CccccCcceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhc---C-CCCCEEEec
Confidence 455555544444444543 57899999999999999999999854 44445555554 3 566766643
No 110
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=49.83 E-value=44 Score=31.88 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=18.8
Q ss_pred CCCCeeEeeecCCCCcEEecCCCEEEEE
Q 012335 74 TKGPEIRTGFLKDGKPIQLVQGQEITIS 101 (466)
Q Consensus 74 l~GpkiR~g~~~~~~~i~l~~G~~v~l~ 101 (466)
..||+.|+.....-..=.|++|+.|.|.
T Consensus 117 s~Gr~~~V~Vsp~Vd~e~LkPG~rVaLN 144 (251)
T 3m9b_A 117 TSGRKMRLTCSPNIDAASLKKGQTVRLN 144 (251)
T ss_dssp CSSSCCEECBCTTSCTTTSCSSCEEEEC
T ss_pred eCCceEEEEeCCCCCHHHCCCCCEEEeC
Confidence 4789999865432111258999999993
No 111
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=49.69 E-value=24 Score=32.36 Aligned_cols=86 Identities=13% Similarity=0.219 Sum_probs=52.0
Q ss_pred EEecCCCEEEEEeC----CCCCCCccEEeecchhhhh--ccCCCCEEEEe--CCeEEEEEEEEecCCCeEEEEEeeCeEe
Q 012335 90 IQLVQGQEITISTD----YSLKGDEKMISMSYKKLAE--DLRPGSVILCS--DGTISLTVLDCAKELGLVRCRCENSAVL 161 (466)
Q Consensus 90 i~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~--~v~~Gd~i~id--dG~i~l~V~~v~~~~~~i~~~v~~gG~l 161 (466)
+-++.|++.+|+.. |..........++-..|.. .+++|+.+.+. +|.+..+|++++ ++.| ++.-+..|
T Consensus 50 ~Gm~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~--~~~V--~vD~NHPL 125 (196)
T 2kfw_A 50 EGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVE--DDHV--VVDGNHML 125 (196)
T ss_dssp SSSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCC--SSSE--EECCCCTT
T ss_pred cCCCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEc--CCEE--EEeCCCCC
Confidence 34679999999865 2223444566677777764 58999999987 566667788774 4444 23334444
Q ss_pred cCCCccccCCcccCCCCCC
Q 012335 162 GERKNVNLPGVIVDLPTLT 180 (466)
Q Consensus 162 ~~~Kgvnlp~~~~~lp~lt 180 (466)
..|.+++--.-+++..-|
T Consensus 126 -AGk~L~F~vev~~vr~at 143 (196)
T 2kfw_A 126 -AGQNLKFNVEVVAIREAT 143 (196)
T ss_dssp -SCCCCEEEEEECCCBCCC
T ss_pred -CCCeEEEEEEEEEeecCC
Confidence 234555444334433334
No 112
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=49.38 E-value=35 Score=33.57 Aligned_cols=60 Identities=13% Similarity=0.122 Sum_probs=40.2
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 10 KTKIVCTLGPASRSVE----MAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 10 ~tkIi~TiGp~~~~~~----~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
+....+++| ..+++ ..+++.++|.+.+.+++.|++.+.-.+.++.+|++. |..+.|++|.
T Consensus 133 ~vp~~~~~g--~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDa 196 (359)
T 1mdl_A 133 PVQAYDSHS--LDGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV---GDDFGIMVDY 196 (359)
T ss_dssp CEEEEEECC--SCHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH---CSSSEEEEEC
T ss_pred CeeeeeecC--CCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh---CCCCEEEEEC
Confidence 455566655 22343 345677899999999999988877667777777654 4334555554
No 113
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=49.28 E-value=19 Score=38.32 Aligned_cols=235 Identities=20% Similarity=0.225 Sum_probs=128.5
Q ss_pred cEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEecCCCccccCCcc--------------cC-
Q 012335 111 KMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVI--------------VD- 175 (466)
Q Consensus 111 ~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~Kgvnlp~~~--------------~~- 175 (466)
+.|++|.-.+-- + .+-++++.+..+|+. +..+. .+-|.=-++..+++|... ++
T Consensus 191 d~IlidDG~i~l--~---V~~v~~~~v~~~V~~----gG~L~---s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ 258 (550)
T 3gr4_A 191 SKIYVDDGLISL--Q---VKQKGADFLVTEVEN----GGSLG---SKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDM 258 (550)
T ss_dssp CEEEETTTTEEE--E---EEEECSSEEEEEEEE----CEEEC---SSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSE
T ss_pred CEEEEeCCEEEE--E---EEEEeCCEEEEEEEe----CcEEc---CCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCE
Confidence 467776544321 1 133566777777752 22221 233555566777777532 11
Q ss_pred --CCC-CChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcC-------------------------------
Q 012335 176 --LPT-LTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHA------------------------------- 221 (466)
Q Consensus 176 --lp~-lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~------------------------------- 221 (466)
+|. =+..|...+.++..+.|-+.-.++.+++++-++.+.+++....
T Consensus 259 ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~ 338 (550)
T 3gr4_A 259 VFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNR 338 (550)
T ss_dssp EEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHH
Confidence 121 2577888875555556777788999999999999888774210
Q ss_pred -CCceEEE------eecCHH-----HHhcHHHHHhcCCeeEE----eCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 222 -KNILLMS------KVENLE-----GVANFDDVLANSDAFMV----ARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 222 -~~~~Iia------KIE~~~-----av~nideI~~~sDgImi----aRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
..+.|+| +|+++. .-+=...|+.-+|++|+ |.|++ |.| ....+.+|+..+.+.- .
T Consensus 339 agkpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~y----Pve-aV~~M~~I~~~aE~~~----~ 409 (550)
T 3gr4_A 339 AGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDY----PLE-AVRMQHLIAREAEAAI----Y 409 (550)
T ss_dssp HTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HHH-HHHHHHHHHHHHHHTS----C
T ss_pred hCCCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCC----HHH-HHHHHHHHHHHHhhcc----h
Confidence 1233444 565533 33336677778999999 66654 333 3345566776665432 1
Q ss_pred eehhhHhhhc-CCC-CCHHHHHhHHHh-hhhhccchhhHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCch
Q 012335 286 ATQMLESMIK-SPR-PTRAEATDVANA-AENFINYGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGT 362 (466)
Q Consensus 286 ATqmLeSM~~-~p~-PTRAEvsDv~na-aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ 362 (466)
..+.++.... .+. .+.+|. ++.+ .+.+..... .-+.... . -...|..+|+.-....|+++|++-.
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~a--ia~aa~~~A~~l~a--~aIv~~T-----~---SG~TA~~iSr~RP~~PIia~T~~~~ 477 (550)
T 3gr4_A 410 HLQLFEELRRLAPITSDPTEA--TAVGAVEASFKCCS--GAIIVLT-----K---SGRSAHQVARYRPRAPIIAVTRNPQ 477 (550)
T ss_dssp HHHHHHHHHHHSCCCCCHHHH--HHHHHHHHHHHTTC--SCEEEEC-----S---SSHHHHHHHTTCCSSCEEEEESCHH
T ss_pred hHHHHHhhhhccCCCCChHHH--HHHHHHHHHHhcCC--CEEEEEC-----C---CcHHHHHHHhhCCCCCEEEEcCCHH
Confidence 1234443322 222 233332 3333 222211000 0000000 0 0123445555555556999999999
Q ss_pred HHHHHHhcCCCCCEEE
Q 012335 363 TAKMVSKYRPSMPILS 378 (466)
Q Consensus 363 ta~~vSk~RP~~PIiA 378 (466)
++|.++=+|--.|++.
T Consensus 478 ~aR~l~L~~GV~P~~~ 493 (550)
T 3gr4_A 478 TARQAHLYRGIFPVLC 493 (550)
T ss_dssp HHHHGGGSTTEEEEEC
T ss_pred HHHHHhccCCeEEEEe
Confidence 9999999998777764
No 114
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=49.24 E-value=1e+02 Score=29.84 Aligned_cols=60 Identities=10% Similarity=0.067 Sum_probs=44.5
Q ss_pred CCCChhcHHHHHhccCcC--CCcEEEEcCCCChhhHHHHHHHHHhcCC--CceEEEeecCHHHHhcHH
Q 012335 177 PTLTEKDKEDILNWGVPN--KIDMIALSFVRKGSDLVEVRNLLRVHAK--NILLMSKVENLEGVANFD 240 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~--~~d~v~~sfV~sa~dv~~~r~~l~~~~~--~~~IiaKIE~~~av~nid 240 (466)
|.-|+.|++.+-+-+.+. |++.|+++ +..+..+++.|...|. .++|.+-|=-|.|-.+.+
T Consensus 43 p~~T~~dI~~lc~eA~~~~~~~aaVCV~----p~~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~ 106 (281)
T 2a4a_A 43 ENGTEDDIRELCNESVKTCPFAAAVCVY----PKFVKFINEKIKQEINPFKPKIACVINFPYGTDSME 106 (281)
T ss_dssp TTCCHHHHHHHHHHHHSSSSCCSEEEEC----GGGHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHH
T ss_pred CCCCHHHHHHHHHHHHhccCCccEEEEC----HHHHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHH
Confidence 566888888886778888 99999987 6778888888864344 688888885555544333
No 115
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=49.04 E-value=63 Score=32.03 Aligned_cols=98 Identities=11% Similarity=-0.007 Sum_probs=62.0
Q ss_pred HHHhccCcCCCcEEEE------cCCCChhhHHHHHHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCc
Q 012335 186 DILNWGVPNKIDMIAL------SFVRKGSDLVEVRNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGD 255 (466)
Q Consensus 186 di~~~~~~~~~d~v~~------sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgD 255 (466)
.+.+|.++.|+|+|++ ++.-|.++=.++-+. ..+.+++||+-+= +.++++......+. +|++|+-.-.
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRV 128 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 3336778999999887 355566555555554 3345789999984 36666666655554 7999997655
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 256 LGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 256 Lg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
+.-..+.+.+...-+.|.++ +.+.|+++--
T Consensus 129 y~~~~s~~~l~~~f~~IA~a--a~~lPiilYn 158 (344)
T 2hmc_A 129 LSRGSVIAAQKAHFKAILSA--APEIPAVIYN 158 (344)
T ss_dssp SSSTTCHHHHHHHHHHHHHH--STTSCEEEEE
T ss_pred cCCCCCHHHHHHHHHHHHhh--CCCCcEEEEe
Confidence 53212345555555555432 4579998753
No 116
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=49.02 E-value=11 Score=31.22 Aligned_cols=65 Identities=12% Similarity=0.097 Sum_probs=48.5
Q ss_pred ChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 206 KGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 206 sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
|.-=+..+++...+.|-++.|.| .+...+++.+.-.|.|++| +.+.+..+++-+.|...|+||.+
T Consensus 19 Tsllv~km~~~a~~~gi~v~i~a-----~~~~~~~~~~~~~DvvLLg----------PQV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 19 SAQLANAINEGANLTEVRVIANS-----GAYGAHYDIMGVYDLIILA----------PQVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEE-----EETTSCTTTGGGCSEEEEC----------GGGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHHHHCCCceEEEE-----cchHHHHhhccCCCEEEEC----------hHHHHHHHHHHHHhhhcCCcEEE
Confidence 33346777888888887777777 2333467777778999998 45666778888889889999886
No 117
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=48.63 E-value=21 Score=32.83 Aligned_cols=122 Identities=14% Similarity=0.149 Sum_probs=76.0
Q ss_pred hccCcCCCcEEEEcCCC-ChhhHHHHHHHHHhcCCCceEEE---eec------CHHHHhcHHHHHhc-----CCeeEEeC
Q 012335 189 NWGVPNKIDMIALSFVR-KGSDLVEVRNLLRVHAKNILLMS---KVE------NLEGVANFDDVLAN-----SDAFMVAR 253 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~-sa~dv~~~r~~l~~~~~~~~Iia---KIE------~~~av~nideI~~~-----sDgImiaR 253 (466)
+.+.+.|+|+|=+..-. +..++.++++.+.+.|-.+..+. -+- ..++++.+...++. ++.|.+..
T Consensus 25 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~ 104 (275)
T 3qc0_A 25 DICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLVLVA 104 (275)
T ss_dssp HHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEEC
T ss_pred HHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEee
Confidence 77889999999886521 45778999999998874433222 121 12455666666665 46777776
Q ss_pred CcccC-cCC----chhHHHHHHHHHHHHHHcCCCeEEeehhhHhh---hcCCCCCHHHHHhHHHhhh
Q 012335 254 GDLGM-EIP----IEKIFLAQKVMIHKANIQGKPVVTATQMLESM---IKSPRPTRAEATDVANAAE 312 (466)
Q Consensus 254 gDLg~-e~~----~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM---~~~p~PTRAEvsDv~naaE 312 (466)
|...- ..+ ++.+...-+++...|.++|..+.+=+ +..+ ..+...|-+++.++.....
T Consensus 105 g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~--~~~~~~~~~~~~~~~~~~~~l~~~~~ 169 (275)
T 3qc0_A 105 GGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEP--LHPMYAADRACVNTLGQALDICETLG 169 (275)
T ss_dssp BCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECC--CCGGGTTTTBSCCCHHHHHHHHHHHC
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeE--CCCcccCCccccCCHHHHHHHHHHhC
Confidence 65431 122 23455666788888888998766432 1111 2345667788877777643
No 118
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=48.56 E-value=44 Score=33.51 Aligned_cols=101 Identities=16% Similarity=0.126 Sum_probs=56.4
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCC------------------hh-----hHHHHHHHHHhcCCCceEEE--eec
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRK------------------GS-----DLVEVRNLLRVHAKNILLMS--KVE 231 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~s------------------a~-----dv~~~r~~l~~~~~~~~Iia--KIE 231 (466)
|.+++.|..++.+.+.+.|+|+|.++--.. .. .++.++++-...+.+++||+ -|.
T Consensus 229 p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~ 308 (367)
T 3zwt_A 229 PDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS 308 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC
Confidence 446777777775677889999999873210 00 12333333333344677776 355
Q ss_pred CHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCC
Q 012335 232 NLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGK 281 (466)
Q Consensus 232 ~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gk 281 (466)
+.+-+. +-|..-+|+|||+|+=|-- ++.-+..+.+.+-..+.+.|.
T Consensus 309 s~~da~--~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G~ 354 (367)
T 3zwt_A 309 SGQDAL--EKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQGF 354 (367)
T ss_dssp SHHHHH--HHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHH--HHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcCC
Confidence 554332 2222348999999986521 233344455555555555553
No 119
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=48.19 E-value=20 Score=37.09 Aligned_cols=49 Identities=27% Similarity=0.460 Sum_probs=38.1
Q ss_pred EEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Q 012335 12 KIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTA 60 (466)
Q Consensus 12 kIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~ 60 (466)
.+.+-+|+.....+.++.++++|++++=++++||......+.++.+|+.
T Consensus 227 ~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 227 LVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD 275 (494)
T ss_dssp CCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred ccccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH
Confidence 3444567665668899999999999999999999877666677666653
No 120
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=48.13 E-value=43 Score=32.38 Aligned_cols=103 Identities=16% Similarity=0.145 Sum_probs=65.1
Q ss_pred CCChhcHHHHHhccCcCCCcEEEEcC-CCCh-----hhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-CCeeE
Q 012335 178 TLTEKDKEDILNWGVPNKIDMIALSF-VRKG-----SDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-SDAFM 250 (466)
Q Consensus 178 ~lte~D~~di~~~~~~~~~d~v~~sf-V~sa-----~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-sDgIm 250 (466)
.++..++..|.+.+.+.|+++|-+.| +... .|..++-..+.+ ..++++.+-..+.+.+ +.-+++ .|.|+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~l~~~~~~i---~~a~~aG~~~v~ 101 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQ-RPGVTYAALAPNLKGF---EAALESGVKEVA 101 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCC-CTTSEEEEECCSHHHH---HHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhh-cCCCEEEEEeCCHHHH---HHHHhCCcCEEE
Confidence 35777777775777789999998864 3221 355444333432 2466777666444433 333333 58887
Q ss_pred Ee--CCcc----cCcCCchhHHHHHHHHHHHHHHcCCCeE
Q 012335 251 VA--RGDL----GMEIPIEKIFLAQKVMIHKANIQGKPVV 284 (466)
Q Consensus 251 ia--RgDL----g~e~~~e~v~~~qk~ii~~~~~~gkPvi 284 (466)
|. -.|+ -...+.++....-+++++.|+++|+.|-
T Consensus 102 i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~ 141 (302)
T 2ftp_A 102 VFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVR 141 (302)
T ss_dssp EEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 62 2232 1225778888888999999999999874
No 121
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=47.94 E-value=31 Score=33.27 Aligned_cols=95 Identities=13% Similarity=0.178 Sum_probs=59.1
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.+ ++...+..+.+++||+-+=+ .++++.....-+. +|++|+..-.+.
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 108 (291)
T 3a5f_A 29 EWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYN 108 (291)
T ss_dssp HHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 67788999999873 3444444444 34444455567899999843 6666666655554 799999765543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
- .+.+.+...-+.| |.+.+.|+++--
T Consensus 109 ~-~s~~~l~~~f~~i---a~a~~lPiilYn 134 (291)
T 3a5f_A 109 K-TTQKGLVKHFKAV---SDAVSTPIIIYN 134 (291)
T ss_dssp C-CCHHHHHHHC-CT---GGGCCSCEEEEE
T ss_pred C-CCHHHHHHHHHHH---HHhcCCCEEEEe
Confidence 2 2334444444444 445689998743
No 122
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=47.53 E-value=89 Score=27.32 Aligned_cols=59 Identities=19% Similarity=0.320 Sum_probs=39.7
Q ss_pred EecCCCEEEEEeC----CCCCCCccEEeecchhhhh--ccCCCCEEEEe--CCe-EEEEEEEEecCCCeE
Q 012335 91 QLVQGQEITISTD----YSLKGDEKMISMSYKKLAE--DLRPGSVILCS--DGT-ISLTVLDCAKELGLV 151 (466)
Q Consensus 91 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~--~v~~Gd~i~id--dG~-i~l~V~~v~~~~~~i 151 (466)
-.+.|++..|+.. |...+.+....++-..|.. .+++|+.+.+. +|. +..+|.+++ ++.+
T Consensus 46 Gm~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~--~~~v 113 (158)
T 3cgm_A 46 GREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVE--GEEV 113 (158)
T ss_dssp TCBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEE--TTEE
T ss_pred CCCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEEC--CCEE
Confidence 3678888888765 2333444556677666654 68999999997 465 456788885 4454
No 123
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=47.28 E-value=72 Score=31.10 Aligned_cols=89 Identities=12% Similarity=0.138 Sum_probs=51.6
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-CCeeEEeCCcccCcCC-chhHH
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-SDAFMVARGDLGMEIP-IEKIF 266 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-sDgImiaRgDLg~e~~-~e~v~ 266 (466)
+.+++.|+|+|.+++=...+.++.++ + ..++++.++-+.+-...+ .+. +|+|.+--.+.|-..+ ...+.
T Consensus 96 ~~~~~~g~d~V~l~~g~p~~~~~~l~----~--~g~~v~~~v~s~~~a~~a---~~~GaD~i~v~g~~~GG~~G~~~~~~ 166 (326)
T 3bo9_A 96 KVCIEEKVPVVTFGAGNPTKYIRELK----E--NGTKVIPVVASDSLARMV---ERAGADAVIAEGMESGGHIGEVTTFV 166 (326)
T ss_dssp HHHHHTTCSEEEEESSCCHHHHHHHH----H--TTCEEEEEESSHHHHHHH---HHTTCSCEEEECTTSSEECCSSCHHH
T ss_pred HHHHHCCCCEEEECCCCcHHHHHHHH----H--cCCcEEEEcCCHHHHHHH---HHcCCCEEEEECCCCCccCCCccHHH
Confidence 55678999999998866544444443 3 258899998776555433 333 7999993212222212 11221
Q ss_pred HHHHHHHHHHHHcCCCeEEeehhh
Q 012335 267 LAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 267 ~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
.+ +++ +...+.|+|.+.-+-
T Consensus 167 ll-~~i---~~~~~iPviaaGGI~ 186 (326)
T 3bo9_A 167 LV-NKV---SRSVNIPVIAAGGIA 186 (326)
T ss_dssp HH-HHH---HHHCSSCEEEESSCC
T ss_pred HH-HHH---HHHcCCCEEEECCCC
Confidence 11 112 234589999987643
No 124
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=47.07 E-value=28 Score=34.01 Aligned_cols=74 Identities=12% Similarity=0.163 Sum_probs=44.4
Q ss_pred CCChhcHHHHHhccCcCCCcEEEEcCCC------------------Ch--------hhHHHHHHHHHhcCCCceEEE--e
Q 012335 178 TLTEKDKEDILNWGVPNKIDMIALSFVR------------------KG--------SDLVEVRNLLRVHAKNILLMS--K 229 (466)
Q Consensus 178 ~lte~D~~di~~~~~~~~~d~v~~sfV~------------------sa--------~dv~~~r~~l~~~~~~~~Iia--K 229 (466)
.+++.|...+.+.+.+.|+|+|.++--. +. +.+.++++.+ +.+++||+ -
T Consensus 221 ~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~---~~~ipVi~~GG 297 (336)
T 1f76_A 221 DLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL---NGRLPIIGVGG 297 (336)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHH---TTSSCEEEESS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHh---CCCCCEEEECC
Confidence 4566665555467788999999987310 11 2233344333 34677777 5
Q ss_pred ecCHHHHhcHHHHHhcCCeeEEeCCcc
Q 012335 230 VENLEGVANFDDVLANSDAFMVARGDL 256 (466)
Q Consensus 230 IE~~~av~nideI~~~sDgImiaRgDL 256 (466)
|-+.+-+... |..=+|+|++||+=|
T Consensus 298 I~~~~da~~~--l~~GAd~V~igr~~l 322 (336)
T 1f76_A 298 IDSVIAAREK--IAAGASLVQIYSGFI 322 (336)
T ss_dssp CCSHHHHHHH--HHHTCSEEEESHHHH
T ss_pred CCCHHHHHHH--HHCCCCEEEeeHHHH
Confidence 7665544322 222389999998754
No 125
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=46.92 E-value=26 Score=33.13 Aligned_cols=53 Identities=8% Similarity=0.048 Sum_probs=35.0
Q ss_pred CCCHHHHHHHH-HhCCceEEEecCCC-------CHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 21 SRSVEMAEKLL-RAGMNVARFNFSHG-------SHAYHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 21 ~~~~~~l~~li-~~G~~v~RiN~shg-------~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
..+.+.++.|. +.|+|++|+-++.. +++...+.++.+=+.+.+.|. .+++|+-
T Consensus 38 ~~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi--~vild~h 98 (291)
T 1egz_A 38 FYTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIANDM--YAIIGWH 98 (291)
T ss_dssp GCSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTTC--EEEEEEE
T ss_pred cCCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCCC--EEEEEcC
Confidence 34678999998 79999999988753 233334444444444556664 4667764
No 126
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=46.80 E-value=77 Score=30.41 Aligned_cols=104 Identities=12% Similarity=0.100 Sum_probs=61.3
Q ss_pred hcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCC-CceEEEee---------cCHHHHhcHHHHHhcCCeeEE
Q 012335 182 KDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAK-NILLMSKV---------ENLEGVANFDDVLANSDAFMV 251 (466)
Q Consensus 182 ~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~-~~~IiaKI---------E~~~av~nideI~~~sDgImi 251 (466)
.|.+.+.+.+.+.|++.+++.- .+.++...+.++...... ...|++-+ .+.+.++.+++.++... ++
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~--vv 93 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPR--VR 93 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTT--EE
T ss_pred cCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCC--eE
Confidence 4566654788899999887764 456676666666654321 12244433 12234555666654333 34
Q ss_pred eCCcccCcCCch-hHHHHH----HHHHHHHHHcCCCeEEeeh
Q 012335 252 ARGDLGMEIPIE-KIFLAQ----KVMIHKANIQGKPVVTATQ 288 (466)
Q Consensus 252 aRgDLg~e~~~e-~v~~~q----k~ii~~~~~~gkPvi~ATq 288 (466)
|=|..|.+.... .-...| ++.++.|++.|+||++=|.
T Consensus 94 aIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r 135 (287)
T 3rcm_A 94 AVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHER 135 (287)
T ss_dssp EEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 446776665431 112334 5678889999999998663
No 127
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=46.71 E-value=34 Score=28.07 Aligned_cols=41 Identities=15% Similarity=0.181 Sum_probs=32.2
Q ss_pred HHHHHHH-HHHhcCCcEEEEEcC---------CchHHHHHHhcCCCCCEEEE
Q 012335 338 LASSAVR-TANCIKAALILVLTR---------GGTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 338 ia~~av~-~a~~~~a~~Ivv~T~---------sG~ta~~vSk~RP~~PIiAv 379 (466)
.+...++ .|.+.++++||+-++ -|+++..+.+.-| |||+.+
T Consensus 95 ~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 145 (146)
T 3s3t_A 95 PKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAP-CNVIVI 145 (146)
T ss_dssp HHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCS-SEEEEE
T ss_pred hHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCC-CCEEEe
Confidence 4555667 788899999998875 4678888888776 999987
No 128
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=46.61 E-value=1.1e+02 Score=29.11 Aligned_cols=93 Identities=11% Similarity=0.021 Sum_probs=56.1
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHHHHHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCcccC
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVEVRNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGDLGM 258 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~~r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgDLg~ 258 (466)
+|.++.|+|++++. +.-|.++=.++-+...+.-.. ||+-+= +.++++.....-+. +|++|+.+-.+.-
T Consensus 26 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 103 (286)
T 2r91_A 26 KNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFP 103 (286)
T ss_dssp HHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSST
T ss_pred HHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCC
Confidence 67788999999873 444444444444433333223 888873 36666666655554 7999997655432
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 259 EIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 259 e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
-.+.+.+...-+.|. .+.+.|+++-
T Consensus 104 ~~s~~~l~~~f~~va---~a~~lPiilY 128 (286)
T 2r91_A 104 RLSERQIAKYFRDLC---SAVSIPVFLY 128 (286)
T ss_dssp TCCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CCCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 024455555555554 4558999874
No 129
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=46.52 E-value=39 Score=28.69 Aligned_cols=41 Identities=24% Similarity=0.287 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhcCCCCCEEEE
Q 012335 338 LASSAVRTANCIKAALILVLTR---------GGTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 338 ia~~av~~a~~~~a~~Ivv~T~---------sG~ta~~vSk~RP~~PIiAv 379 (466)
.+...++.|.+.++++||+-++ -|+++..+.+.-| |||+.+
T Consensus 105 ~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~-~PVlvv 154 (170)
T 2dum_A 105 PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTK-KPVLII 154 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCS-SCEEEE
T ss_pred hHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCC-CCEEEE
Confidence 4445567788999999998876 3567778877765 999999
No 130
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=46.50 E-value=38 Score=35.27 Aligned_cols=55 Identities=15% Similarity=0.203 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHHhCCceEEEecCCCC-------HHHHHHHHHHHHHH---HHHcCCceEEEecCCCC
Q 012335 21 SRSVEMAEKLLRAGMNVARFNFSHGS-------HAYHQETLDNLRTA---MNNTGILCAVMLDTKGP 77 (466)
Q Consensus 21 ~~~~~~l~~li~~G~~v~RiN~shg~-------~~~~~~~i~~ir~~---~~~~~~~i~i~~Dl~Gp 77 (466)
..+.+.|+.|-+.|+|++||-+++.. .....+.++.++++ +.+.| +.+++||-..
T Consensus 45 ~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~G--i~vildlH~~ 109 (515)
T 3icg_A 45 MTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND--MYVIINLHHE 109 (515)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEEECCSC
T ss_pred cCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEecCCC
Confidence 34689999999999999999887532 11112334444444 33344 5788888654
No 131
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=46.46 E-value=36 Score=27.75 Aligned_cols=41 Identities=20% Similarity=0.284 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC--------CchHHHHHHhcCCCCCEEEE
Q 012335 338 LASSAVRTANCIKAALILVLTR--------GGTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 338 ia~~av~~a~~~~a~~Ivv~T~--------sG~ta~~vSk~RP~~PIiAv 379 (466)
.+...++.|.+.+++.||+-++ -|+++..+.+.-| |||+.+
T Consensus 94 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~~-~pVlvv 142 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAE-CSVLVV 142 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHCS-SEEEEE
T ss_pred hHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhCC-CCEEEe
Confidence 4455567788999999999875 3677888877655 999987
No 132
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=46.35 E-value=34 Score=33.90 Aligned_cols=62 Identities=15% Similarity=0.207 Sum_probs=40.9
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 10 KTKIVCTLGPASRSVE----MAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 10 ~tkIi~TiGp~~~~~~----~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
+....+|.|....+++ ..+++.++|.+.+.|++.|++.+.-.+.++.+|++. |..+.|++|.
T Consensus 133 ~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---G~d~~l~vDa 198 (371)
T 2ovl_A 133 VVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL---GDSFPLMVDA 198 (371)
T ss_dssp EEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH---CTTSCEEEEC
T ss_pred CeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh---CCCCeEEEEC
Confidence 3455666553222443 345678899999999999998887777777777654 3334455554
No 133
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=45.87 E-value=1e+02 Score=29.44 Aligned_cols=93 Identities=10% Similarity=-0.098 Sum_probs=57.3
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHHHHHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCcccC
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVEVRNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGDLGM 258 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~~r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgDLg~ 258 (466)
+|.++.|+|++++. +.-|.++=.++-+...+.-.. ||+-+= +.++++.....-+. +|++|+-.-.+.-
T Consensus 27 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 104 (288)
T 2nuw_A 27 KNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYFP 104 (288)
T ss_dssp HHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSSC
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCC
Confidence 77788999999873 444555555554444333223 888874 36666666665554 7999987655432
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 259 EIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 259 e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
-.+.+.+...-+.|. .+.+.|+++-
T Consensus 105 ~~s~~~l~~~f~~va---~a~~lPiilY 129 (288)
T 2nuw_A 105 RLPEKFLAKYYEEIA---RISSHSLYIY 129 (288)
T ss_dssp SCCHHHHHHHHHHHH---HHCCSCEEEE
T ss_pred CCCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 124455555555554 4558999874
No 134
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=45.47 E-value=35 Score=29.23 Aligned_cols=40 Identities=28% Similarity=0.248 Sum_probs=30.9
Q ss_pred HHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhcCCCCCEEEE
Q 012335 339 ASSAVRTANCIKAALILVLTR---------GGTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 339 a~~av~~a~~~~a~~Ivv~T~---------sG~ta~~vSk~RP~~PIiAv 379 (466)
+...++.|.+.++++||+-++ -|+++..+.+.-| |||+.+
T Consensus 108 ~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~-~PVlvV 156 (163)
T 1tq8_A 108 VDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAK-VDVLIV 156 (163)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTT-CEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCC-CCEEEE
Confidence 445566788999999999886 2567777777665 999999
No 135
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=45.19 E-value=29 Score=36.47 Aligned_cols=234 Identities=15% Similarity=0.140 Sum_probs=127.2
Q ss_pred cEEeecchhhhhccCCCCEEEEe-CCeEEEEEEEEecCCCeEEEEEeeCeEecCCCccccCCcc----------------
Q 012335 111 KMISMSYKKLAEDLRPGSVILCS-DGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVI---------------- 173 (466)
Q Consensus 111 ~~i~v~~~~~~~~v~~Gd~i~id-dG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~Kgvnlp~~~---------------- 173 (466)
+.|++|.-.+--. .+-++ ++.+..+|. .+..+. .+-|.=-++..+++|...
T Consensus 140 ~~ilidDG~i~l~-----V~~~~~~~~i~~~v~----~gG~L~---~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD 207 (499)
T 3hqn_D 140 NYIYIDDGILILQ-----VQSHEDEQTLECTVT----NSHTIS---DRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVD 207 (499)
T ss_dssp CEEEETTTTEEEE-----EEEEEETTEEEEEEC----SCEEEE---TTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCS
T ss_pred CEEEEeCCEEEEE-----EEEEcCCCeEEEEEE----eCcEee---CCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCC
Confidence 5677765333111 13344 456777664 122221 234555566777777532
Q ss_pred -cCCCC-CChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHh--------------------------------
Q 012335 174 -VDLPT-LTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRV-------------------------------- 219 (466)
Q Consensus 174 -~~lp~-lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~-------------------------------- 219 (466)
+-+|. =+..|...+.++..+.|-+.-.++.+++++-++.+.+++..
T Consensus 208 ~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~ 287 (499)
T 3hqn_D 208 MIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCN 287 (499)
T ss_dssp EEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHH
Confidence 11222 25778888755555566677788999999999998877641
Q ss_pred -cCCCceEEE------eecCHH-----HHhcHHHHHhcCCeeEE----eCCcccCcCCchhHHHHHHHHHHHHHHcCCCe
Q 012335 220 -HAKNILLMS------KVENLE-----GVANFDDVLANSDAFMV----ARGDLGMEIPIEKIFLAQKVMIHKANIQGKPV 283 (466)
Q Consensus 220 -~~~~~~Iia------KIE~~~-----av~nideI~~~sDgImi----aRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPv 283 (466)
.| .+.|+| +|+++. .-+=...|+.-+|++|+ |.|++ |.| ....+.+|+..+.+.-
T Consensus 288 ~ag-kpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSgETA~G~y----Pve-aV~~m~~I~~~aE~~~--- 358 (499)
T 3hqn_D 288 VAG-KPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKY----PNE-VVQYMARICLEAQSAL--- 358 (499)
T ss_dssp HHT-CCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HHH-HHHHHHHHHHHHHHHC---
T ss_pred HcC-CCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEeccccCCCC----HHH-HHHHHHHHHHHHHhcc---
Confidence 12 233443 565543 33335677778999999 66654 333 3445667776665432
Q ss_pred EEeehhhHhhhc-CCCC-CHHHHHhHHHh-hhhhccchhhHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCC
Q 012335 284 VTATQMLESMIK-SPRP-TRAEATDVANA-AENFINYGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRG 360 (466)
Q Consensus 284 i~ATqmLeSM~~-~p~P-TRAEvsDv~na-aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~s 360 (466)
...+.++.+.. .+.| +..|. ++.+ .+.+..... .-+..... -...|..+|+.-....|+++|++
T Consensus 359 -~~~~~~~~~~~~~~~~~~~~~a--ia~aa~~~A~~l~a--~aIv~~T~--------SG~tA~~isr~RP~~pIia~T~~ 425 (499)
T 3hqn_D 359 -NEYVFFNSIKKLQHIPMSADEA--VCSSAVNSVYETKA--KAMVVLSN--------TGRSARLVAKYRPNCPIVCVTTR 425 (499)
T ss_dssp -CHHHHHHHHHHTCCSSCCHHHH--HHHHHHHHHHHHTC--SEEEEECS--------SSHHHHHHHHTCCSSCEEEEESC
T ss_pred -hhHHHHhhhhhccCCCCCHHHH--HHHHHHHHHHhcCC--CEEEEECC--------CcHHHHHHHhhCCCCCEEEEcCC
Confidence 11234443322 2222 33332 3333 222111000 00000000 01344555666555669999999
Q ss_pred chHHHHHHhcCCCCCEEE
Q 012335 361 GTTAKMVSKYRPSMPILS 378 (466)
Q Consensus 361 G~ta~~vSk~RP~~PIiA 378 (466)
-.++|.++=||--.|++.
T Consensus 426 ~~~~r~l~L~~GV~p~~~ 443 (499)
T 3hqn_D 426 LQTCRQLNITQGVESVFF 443 (499)
T ss_dssp HHHHHHGGGSTTEEEEEC
T ss_pred HHHHHHhhccCCeEEEEe
Confidence 999999999998777664
No 136
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=45.00 E-value=57 Score=32.50 Aligned_cols=62 Identities=16% Similarity=0.239 Sum_probs=40.5
Q ss_pred CeEEEEecCCCCCCH-------HHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 10 KTKIVCTLGPASRSV-------EMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 10 ~tkIi~TiGp~~~~~-------~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
+....+++|-...++ +..+++.++|.+.+.+...|++.+.-.+.++.+|++. |.-+.|++|.
T Consensus 123 ~vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~---G~d~~l~vDa 191 (382)
T 2gdq_A 123 EIPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA---GSSITMILDA 191 (382)
T ss_dssp EEEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---CTTSEEEEEC
T ss_pred ceeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh---CCCCEEEEEC
Confidence 345555564222333 3445677899999999999988877677777777654 4334555555
No 137
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=44.99 E-value=1.2e+02 Score=30.14 Aligned_cols=99 Identities=17% Similarity=0.194 Sum_probs=54.3
Q ss_pred HHHHHhccCcCCCcEEEE--cCCCChhhHHHHHHHHHhcCCCceEEE-eecCHHHHhcHHHHHhc-CCeeEEeCCcccCc
Q 012335 184 KEDILNWGVPNKIDMIAL--SFVRKGSDLVEVRNLLRVHAKNILLMS-KVENLEGVANFDDVLAN-SDAFMVARGDLGME 259 (466)
Q Consensus 184 ~~di~~~~~~~~~d~v~~--sfV~sa~dv~~~r~~l~~~~~~~~Iia-KIE~~~av~nideI~~~-sDgImiaRgDLg~e 259 (466)
.+.+ +.+++.|+|+|.+ ++-.+..-++.++.+-... ++++++ .+-+++..+. ..++ +|+|.++-|.=+..
T Consensus 107 ~e~a-~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A~~---l~~aGaD~I~VG~~~Gs~~ 180 (361)
T 3khj_A 107 IERA-KLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKE---LIENGADGIKVGIGPGSIC 180 (361)
T ss_dssp HHHH-HHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC--CCEEEEEEECSHHHHHH---HHHTTCSEEEECSSCCTTC
T ss_pred HHHH-HHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc--CCcEEEccCCCHHHHHH---HHHcCcCEEEEecCCCcCC
Confidence 3444 5568899999987 3322322233344333322 577776 7777665543 3344 89999962211111
Q ss_pred -------CCchhHHHHHHHHHHHHHHcCCCeEEeehh
Q 012335 260 -------IPIEKIFLAQKVMIHKANIQGKPVVTATQM 289 (466)
Q Consensus 260 -------~~~e~v~~~qk~ii~~~~~~gkPvi~ATqm 289 (466)
.+.+. ...-.++.+.++..+.|+|.+.-+
T Consensus 181 ~tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~GGI 216 (361)
T 3khj_A 181 TTRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGI 216 (361)
T ss_dssp CHHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEESCC
T ss_pred CcccccCCCCCc-HHHHHHHHHHHhhcCCeEEEECCC
Confidence 11222 223345555667779999977654
No 138
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=44.39 E-value=34 Score=33.17 Aligned_cols=94 Identities=11% Similarity=0.005 Sum_probs=59.1
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHH-HHHHHHhcCCCceEEEee---cCHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVE-VRNLLRVHAKNILLMSKV---ENLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~-~r~~l~~~~~~~~IiaKI---E~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++. +.-|.++=.+ ++...+..+.+++||+-+ -+.++++.....-+. +|++|+..-.+.
T Consensus 32 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 111 (300)
T 3eb2_A 32 DDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYF 111 (300)
T ss_dssp HHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSS
T ss_pred HHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 67788999998643 2233333333 344444556788899887 356677666666555 799998765543
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
- .+.+.+...-+.|. .+.+.|+++-
T Consensus 112 ~-~~~~~l~~~f~~va---~a~~lPiilY 136 (300)
T 3eb2_A 112 P-LKDAQIESYFRAIA---DAVEIPVVIY 136 (300)
T ss_dssp C-CCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred C-CCHHHHHHHHHHHH---HHCCCCEEEE
Confidence 2 34455555555554 4457999975
No 139
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=44.06 E-value=71 Score=30.38 Aligned_cols=107 Identities=8% Similarity=0.029 Sum_probs=68.8
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCC-CceEEEeecCHHHHhcHHHHHhcCCee--EEeCCcccCcCCc-hh
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAK-NILLMSKVENLEGVANFDDVLANSDAF--MVARGDLGMEIPI-EK 264 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~-~~~IiaKIE~~~av~nideI~~~sDgI--miaRgDLg~e~~~-e~ 264 (466)
+.+.+.|+|++.++-. -.++..++++.+.+.|- -+.+++- ....+.+.+|.+.++|. ++.+ .|+ .|. ..
T Consensus 110 ~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~I~lvaP---~t~~eRi~~ia~~a~gFiY~Vs~--~Gv-TG~~~~ 182 (252)
T 3tha_A 110 KKAKSLGICALIVPEL-SFEESDDLIKECERYNIALITLVSV---TTPKERVKKLVKHAKGFIYLLAS--IGI-TGTKSV 182 (252)
T ss_dssp HHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEECEEEET---TSCHHHHHHHHTTCCSCEEEECC--SCS-SSCSHH
T ss_pred HHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeEEEEeCC---CCcHHHHHHHHHhCCCeEEEEec--CCC-CCcccC
Confidence 4557899999999987 45678888898888773 3334432 12358899999999877 3432 111 122 23
Q ss_pred HHHHHHHHHHHHHHc-CCCeEEeehhhHhhhcCCCCCHHHHHhHHHhh
Q 012335 265 IFLAQKVMIHKANIQ-GKPVVTATQMLESMIKSPRPTRAEATDVANAA 311 (466)
Q Consensus 265 v~~~qk~ii~~~~~~-gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naa 311 (466)
++.-.+..+++.+++ +.|+++..- .-|++.+..+...|
T Consensus 183 ~~~~~~~~v~~vr~~~~~Pv~vGfG---------Ist~e~a~~~~~~A 221 (252)
T 3tha_A 183 EEAILQDKVKEIRSFTNLPIFVGFG---------IQNNQDVKRMRKVA 221 (252)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEESS---------CCSHHHHHHHTTTS
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEcC---------cCCHHHHHHHHhcC
Confidence 444456777877775 779998764 44555555544433
No 140
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=44.05 E-value=20 Score=38.11 Aligned_cols=50 Identities=18% Similarity=0.304 Sum_probs=39.9
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Q 012335 10 KTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRT 59 (466)
Q Consensus 10 ~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~ 59 (466)
+-.+=|.+|-.-...+-++.|+++|+|++=|+.+||..+...++++.+|+
T Consensus 269 rL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~ 318 (556)
T 4af0_A 269 QLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQ 318 (556)
T ss_dssp CBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHH
T ss_pred ceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHh
Confidence 34456667765567788999999999999999999998887777776665
No 141
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=43.85 E-value=1.2e+02 Score=26.08 Aligned_cols=60 Identities=13% Similarity=0.183 Sum_probs=40.6
Q ss_pred EecCCCEEEEEeC----CCCCCCccEEeecchhhh-hccCCCCEEEEe--CCe-EEEEEEEEecCCCeEE
Q 012335 91 QLVQGQEITISTD----YSLKGDEKMISMSYKKLA-EDLRPGSVILCS--DGT-ISLTVLDCAKELGLVR 152 (466)
Q Consensus 91 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~-~~v~~Gd~i~id--dG~-i~l~V~~v~~~~~~i~ 152 (466)
-.+.|++..|+.. |...+......++-..|. ..+++|+.+.+. ||. +...|++++ ++.+.
T Consensus 56 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~--~~~v~ 123 (151)
T 2kr7_A 56 KAQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFS--ATHVM 123 (151)
T ss_dssp TCCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEEC--SSEEE
T ss_pred CCCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEEC--CCEEE
Confidence 3678999888865 333344455667766663 268999999987 575 667788885 44543
No 142
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=43.80 E-value=1.1e+02 Score=27.16 Aligned_cols=59 Identities=15% Similarity=0.323 Sum_probs=41.0
Q ss_pred EecCCCEEEEEeC----CCCCCCccEEeecchhhhh--ccCCCCEEEEe--CCe-EEEEEEEEecCCCeE
Q 012335 91 QLVQGQEITISTD----YSLKGDEKMISMSYKKLAE--DLRPGSVILCS--DGT-ISLTVLDCAKELGLV 151 (466)
Q Consensus 91 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~--~v~~Gd~i~id--dG~-i~l~V~~v~~~~~~i 151 (466)
-.+.|++.+|+.. |.....+....++-..|.. .+++|+.+.+. ||. +...|++++ ++.+
T Consensus 74 gm~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~--~~~V 141 (169)
T 4dt4_A 74 GLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREIN--GDSI 141 (169)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEE--TTEE
T ss_pred CCCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEc--CCEE
Confidence 4678999998865 2233344566677677764 48999999986 454 678899985 4454
No 143
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=43.72 E-value=2.2e+02 Score=28.32 Aligned_cols=127 Identities=11% Similarity=0.098 Sum_probs=81.8
Q ss_pred CCChhcHHHHHhccCcCCCcEEEE-cCCCChhhHHHHHHHHHhcCCCceEEEeec-CHHHHhcHHHHHhcC--C--eeEE
Q 012335 178 TLTEKDKEDILNWGVPNKIDMIAL-SFVRKGSDLVEVRNLLRVHAKNILLMSKVE-NLEGVANFDDVLANS--D--AFMV 251 (466)
Q Consensus 178 ~lte~D~~di~~~~~~~~~d~v~~-sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE-~~~av~nideI~~~s--D--gImi 251 (466)
.++..|+..|.+...+.|+|.|=+ +|+-++.|.+.++.+... ..+..+.+-.= +.+.++..-+-+..+ | .+++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~ 108 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKT-ITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFI 108 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTT-CSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh-CCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEe
Confidence 467788888866667799999877 466778899999887653 35566555441 444544332222222 3 4566
Q ss_pred eCCccc----CcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHhh
Q 012335 252 ARGDLG----MEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAA 311 (466)
Q Consensus 252 aRgDLg----~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naa 311 (466)
+-.|+- .....+++...-.++++.|+++|..|.+..+ ...+-+...+.+++.++
T Consensus 109 ~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~e------d~~r~~~~~~~~~~~~~ 166 (370)
T 3rmj_A 109 ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCE------DALRSEIDFLAEICGAV 166 (370)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEE------TGGGSCHHHHHHHHHHH
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecC------CCCccCHHHHHHHHHHH
Confidence 656653 2345677777778899999999998876544 12344555666676663
No 144
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=43.69 E-value=37 Score=33.65 Aligned_cols=57 Identities=14% Similarity=0.201 Sum_probs=36.4
Q ss_pred CCCCCCHHHHHHHHHhCCceEEEecCCCC-------H-HHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 012335 18 GPASRSVEMAEKLLRAGMNVARFNFSHGS-------H-AYHQETLDNLRTAMNNTGILCAVMLDTKG 76 (466)
Q Consensus 18 Gp~~~~~~~l~~li~~G~~v~RiN~shg~-------~-~~~~~~i~~ir~~~~~~~~~i~i~~Dl~G 76 (466)
|....+++.++.|-+.|+|++||-++... . +...+.++.+=+.+.+.| +.+++|+-.
T Consensus 49 g~~~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~G--i~vIldlH~ 113 (353)
T 3l55_A 49 GQPETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAG--LYAIVNVHH 113 (353)
T ss_dssp SCCCCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHT--CEEEEECCT
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 33344789999999999999999997532 1 222333333333344555 467888864
No 145
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=43.62 E-value=61 Score=30.25 Aligned_cols=67 Identities=13% Similarity=0.177 Sum_probs=46.9
Q ss_pred HHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 210 LVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 210 v~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
++.+++.+.+.+..+.+.+--+... -+|++++++-+|.|+.+-++. .....+...|++.|+|++.+.
T Consensus 87 a~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~----------~~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 87 VESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDNV----------AVRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSSH----------HHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCCH----------HHHHHHHHHHHHcCCCEEEee
Confidence 5566667777676776655433332 257788888899998874332 356788899999999988763
No 146
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=43.52 E-value=47 Score=31.99 Aligned_cols=68 Identities=13% Similarity=0.166 Sum_probs=51.7
Q ss_pred hhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 207 GSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 207 a~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
.+.++.++++..+. .+.+++-+-+++.++-+.+. .|.+-||-+++- +..+++.+.+.||||++.
T Consensus 88 ~~gl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---vd~~kIgs~~~~-----------n~~ll~~~a~~~kPV~lk 151 (276)
T 1vs1_A 88 LEGLKLLRRAGDEA--GLPVVTEVLDPRHVETVSRY---ADMLQIGARNMQ-----------NFPLLREVGRSGKPVLLK 151 (276)
T ss_dssp HHHHHHHHHHHHHH--TCCEEEECCCGGGHHHHHHH---CSEEEECGGGTT-----------CHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHc--CCcEEEecCCHHHHHHHHHh---CCeEEECccccc-----------CHHHHHHHHccCCeEEEc
Confidence 56778888888775 48899999888887766664 799999977763 233455666789999999
Q ss_pred ehhh
Q 012335 287 TQML 290 (466)
Q Consensus 287 TqmL 290 (466)
|.|-
T Consensus 152 ~G~~ 155 (276)
T 1vs1_A 152 RGFG 155 (276)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 8764
No 147
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=43.47 E-value=52 Score=31.97 Aligned_cols=84 Identities=15% Similarity=0.146 Sum_probs=58.6
Q ss_pred cCcCCCcEEEEcCCCC--------------hhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcc
Q 012335 191 GVPNKIDMIALSFVRK--------------GSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDL 256 (466)
Q Consensus 191 ~~~~~~d~v~~sfV~s--------------a~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDL 256 (466)
+.+.|+.+|+-+.... .+-++.++++..+. .+.+++-+-+++.++-+.+ ..|.+-|+-+++
T Consensus 44 ~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--Glp~~tev~d~~~v~~l~~---~vd~lkIgA~~~ 118 (288)
T 3tml_A 44 CEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQL--GLPVLTDVHSIDEIEQVAS---VVDVLQTPAFLC 118 (288)
T ss_dssp HHHHTCCEEEECBC--------------CHHHHHHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGT
T ss_pred HHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHH---hCCEEEECcccc
Confidence 3445888887753331 35677778877665 4889998888877766655 489999997665
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 257 GMEIPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 257 g~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
- ..+ +++.+...||||++.|.|.
T Consensus 119 ~------n~~-----LLr~~a~~gkPVilK~G~~ 141 (288)
T 3tml_A 119 R------QTD-----FIHACARSGKPVNIKKGQF 141 (288)
T ss_dssp T------CHH-----HHHHHHTSSSCEEEECCTT
T ss_pred c------CHH-----HHHHHHccCCcEEEeCCCC
Confidence 3 233 3455668999999998874
No 148
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=43.43 E-value=18 Score=21.69 Aligned_cols=15 Identities=47% Similarity=0.403 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHH
Q 012335 48 AYHQETLDNLRTAMN 62 (466)
Q Consensus 48 ~~~~~~i~~ir~~~~ 62 (466)
++.+++++++|+++-
T Consensus 3 eeyqemlenlreaev 17 (26)
T 2dpr_A 3 EEYQEMLENLREAEV 17 (26)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 567899999999864
No 149
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=43.37 E-value=21 Score=36.49 Aligned_cols=43 Identities=26% Similarity=0.451 Sum_probs=32.6
Q ss_pred EecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Q 012335 15 CTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRT 59 (466)
Q Consensus 15 ~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~ 59 (466)
+.+|+.. .+.++.++++|++++=|+.+||.++.+.++++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 3455543 789999999999999999999987765566655553
No 150
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=43.24 E-value=49 Score=31.57 Aligned_cols=103 Identities=12% Similarity=0.075 Sum_probs=60.6
Q ss_pred cHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEee---cC--------HHHHhcHHHHHhcCCeeEE
Q 012335 183 DKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKV---EN--------LEGVANFDDVLANSDAFMV 251 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKI---E~--------~~av~nideI~~~sDgImi 251 (466)
|.+.+.+.+.+.|++.++++-+ +.++...+.++....+ ++...+=| +- .+.++.+++.+...+.-.+
T Consensus 28 d~~~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~-~v~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 105 (301)
T 2xio_A 28 DLQDVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG-MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVV 105 (301)
T ss_dssp CHHHHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT-TEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEE
T ss_pred CHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCCeE
Confidence 4444446677899998887743 5777777777655432 33222222 11 1234555555544322345
Q ss_pred eCCcccCcCCc-h-hHHHHH----HHHHHHHHHcCCCeEEee
Q 012335 252 ARGDLGMEIPI-E-KIFLAQ----KVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 252 aRgDLg~e~~~-e-~v~~~q----k~ii~~~~~~gkPvi~AT 287 (466)
|=|..|++... . .-...| +..++.|++.|+||++=|
T Consensus 106 aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~ 147 (301)
T 2xio_A 106 AIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHC 147 (301)
T ss_dssp EEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEE
T ss_pred EEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 55777777633 1 112445 466788999999999876
No 151
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=42.83 E-value=1.3e+02 Score=28.92 Aligned_cols=94 Identities=7% Similarity=-0.055 Sum_probs=56.9
Q ss_pred hccCcCCCcEEEEc------CCCChhhHHHHHHHHHhcCCCceEEEeecC---HHHHhcHHHHHhc-CCeeEEeCCcccC
Q 012335 189 NWGVPNKIDMIALS------FVRKGSDLVEVRNLLRVHAKNILLMSKVEN---LEGVANFDDVLAN-SDAFMVARGDLGM 258 (466)
Q Consensus 189 ~~~~~~~~d~v~~s------fV~sa~dv~~~r~~l~~~~~~~~IiaKIE~---~~av~nideI~~~-sDgImiaRgDLg~ 258 (466)
+|.++.|+|++++. +.-|.++=.++-+...+.-.. ||+-+=+ .++++.....-+. +|++|+.+-.+.-
T Consensus 27 ~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 104 (293)
T 1w3i_A 27 ENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYP 104 (293)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCSCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 77789999998873 444555555544444433223 8888743 5566555554444 6999987655432
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 259 EIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 259 e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
-.+.+.+...-+.|. .+.+.|+++--
T Consensus 105 ~~s~~~l~~~f~~va---~a~~lPiilYn 130 (293)
T 1w3i_A 105 RMSEKHLVKYFKTLC---EVSPHPVYLYN 130 (293)
T ss_dssp SCCHHHHHHHHHHHH---HHCSSCEEEEE
T ss_pred CCCHHHHHHHHHHHH---hhCCCCEEEEE
Confidence 124455555555554 45589998743
No 152
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=42.77 E-value=53 Score=32.56 Aligned_cols=60 Identities=15% Similarity=0.119 Sum_probs=39.8
Q ss_pred CceEEEeecCHHH-HhcHHHHHhc--CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHh
Q 012335 223 NILLMSKVENLEG-VANFDDVLAN--SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLES 292 (466)
Q Consensus 223 ~~~IiaKIE~~~a-v~nideI~~~--sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeS 292 (466)
.++|++ =|+... .+.+.++++. +|.|++-.+-.|- ..--.+|+..|+++|.++.+- ++||
T Consensus 251 ~iPIa~-dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GG-------it~~~~i~~~A~~~g~~~~~~--~~~~ 313 (382)
T 1rvk_A 251 DIPVVG-PESAAGKHWHRAEWIKAGACDILRTGVNDVGG-------ITPALKTMHLAEAFGMECEVH--GNTA 313 (382)
T ss_dssp SSCEEE-CSSCSSHHHHHHHHHHTTCCSEEEECHHHHTS-------HHHHHHHHHHHHHTTCCEEEC--CCSH
T ss_pred CCCEEE-eCCccCcHHHHHHHHHcCCCCEEeeCchhcCC-------HHHHHHHHHHHHHcCCeEeec--CCCC
Confidence 355444 466555 6667777654 7999986544432 123367999999999998875 6665
No 153
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=42.61 E-value=61 Score=30.43 Aligned_cols=54 Identities=9% Similarity=0.044 Sum_probs=40.9
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHh
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVA 237 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~ 237 (466)
|..|+.|++.+.+-+.++|+..|+++ +..+..++ .| .+.+++|.+=|=-|.|-.
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~-~l--~~~~v~v~tVigFP~G~~ 77 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCVS----PPLVSVAA-GV--APSGLAIAAVAGFPSGKH 77 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHH-HH--CCTTCEEEEEESTTTCCS
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEC----HHHHHHHH-Hh--cCCCCeEEEEecCCCCCC
Confidence 67789998887677888999999986 67788888 77 345677777775555543
No 154
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=42.55 E-value=70 Score=30.97 Aligned_cols=67 Identities=18% Similarity=0.249 Sum_probs=48.6
Q ss_pred HHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHH-----------hcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHH
Q 012335 210 LVEVRNLLRVHAKNILLMSKVENLEGVANFDDVL-----------ANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANI 278 (466)
Q Consensus 210 v~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~-----------~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~ 278 (466)
++.+++.|.+.|.++.|.+--+.....+|+++++ +-.|.|+-+-.+ +.....+-+.|.+
T Consensus 91 a~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn----------~~~R~~in~~c~~ 160 (292)
T 3h8v_A 91 VQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN----------FEARMTINTACNE 160 (292)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc----------hhhhhHHHHHHHH
Confidence 5667777888888899888777766667777776 346766654222 2356778899999
Q ss_pred cCCCeEEe
Q 012335 279 QGKPVVTA 286 (466)
Q Consensus 279 ~gkPvi~A 286 (466)
+++|.+.+
T Consensus 161 ~~~Pli~~ 168 (292)
T 3h8v_A 161 LGQTWMES 168 (292)
T ss_dssp HTCCEEEE
T ss_pred hCCCEEEe
Confidence 99998854
No 155
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=42.53 E-value=80 Score=31.13 Aligned_cols=66 Identities=8% Similarity=-0.064 Sum_probs=50.7
Q ss_pred hHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 209 DLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 209 dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
-+..+.+.|.+.+..+.+-+--+.... +.+++++-.|.|+.+-.+ +..+..+-+.|+++++|+|.+
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~----------~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEK--KPESFFTQFDAVCLTCCS----------RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGG--CCHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCc--chHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 356677888888888888877665544 568888888999887433 346778999999999999875
No 156
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=42.41 E-value=2.2e+02 Score=26.68 Aligned_cols=172 Identities=12% Similarity=0.096 Sum_probs=98.7
Q ss_pred cCcCCCcEEEEcCCC--ChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHH
Q 012335 191 GVPNKIDMIALSFVR--KGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLA 268 (466)
Q Consensus 191 ~~~~~~d~v~~sfV~--sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~ 268 (466)
.++.|.|.|.+..-. +.+++.++-+.+++ .+++++--.=++ +.+.+-+|++++- ||-.+-..+-+.-.
T Consensus 32 ~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~--~~~Piil~p~~~------~~~~~gaD~il~p--slln~~~~~~i~g~ 101 (235)
T 3w01_A 32 ICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR--YPLPLVLEISNI------ESVMPGFDFYFVP--TVLNSTDVAFHNGT 101 (235)
T ss_dssp HHTSSCSEEEECCSSCCCHHHHHHHHHHHTT--SCSCEEEECCCS------TTCCTTCSEEEEE--EETTBSSGGGTTHH
T ss_pred HHHcCCCEEEECCcCCcCHHHHHHHHHHhcC--cCCCEEEecCCH------HHhhcCCCEEEEc--cccCCCCcchhhhH
Confidence 468999999999876 67778888888876 567777655454 3346679999996 44444333333344
Q ss_pred HHHHHHHHHHcCC-----CeEEeehhhHhhhcCCCCCHHHHHhHHHhhhhhccchhhHHHHHhhCCCCCCcHHHHHHHHH
Q 012335 269 QKVMIHKANIQGK-----PVVTATQMLESMIKSPRPTRAEATDVANAAENFINYGDLFKKIMETAPVPMSPLESLASSAV 343 (466)
Q Consensus 269 qk~ii~~~~~~gk-----Pvi~ATqmLeSM~~~p~PTRAEvsDv~naaE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av 343 (466)
|.+- ++++|. -+|.-- .++-+|.-+-+.+++ ..+.+ ..+.++..|.
T Consensus 102 ~~~a---~~~~gl~~~~~e~i~~g----Yivv~p~s~v~~v~~--------------------a~~~~--~~e~iaa~A~ 152 (235)
T 3w01_A 102 LLEA---LKTYGHSIDFEEVIFEG----YVVCNADSKVAKHTK--------------------ANTDL--TTEDLEAYAQ 152 (235)
T ss_dssp HHHH---HHHHGGGCCGGGEEEEE----EEECCSSSHHHHHTT--------------------BCCCC--CHHHHHHHHH
T ss_pred HHHH---HHHcCCCCcccceeeee----EEEECCCCChhhccc--------------------CCcCC--CHHHHHHHHH
Confidence 4443 777785 333211 112234322222221 11122 2444444444
Q ss_pred HHHHhcCCcEEEEEcCCchH--HHHHHhcC---CCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 344 RTANCIKAALILVLTRGGTT--AKMVSKYR---PSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 344 ~~a~~~~a~~Ivv~T~sG~t--a~~vSk~R---P~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
-+++-++-..|-+-. ||.+ ..++.+.| +..|++.- - ..+++..|+++.- |..-+....
T Consensus 153 ~a~~~~g~~~vY~e~-sG~~g~~~~v~~ir~~~~~~pv~vG-------f----GI~~~e~a~~~~~--gAD~VVVGS 215 (235)
T 3w01_A 153 MVNHMYRLPVMYIEY-SGIYGDVSKVQAVSEHLTETQLFYG-------G----GISSEQQATEMAA--IADTIIVGD 215 (235)
T ss_dssp HHHHTTCCSEEEEEC-TTSCCCHHHHHHHHTTCSSSEEEEE-------S----CCCSHHHHHHHHT--TSSEEEECT
T ss_pred HHHHHcCCCEEEEec-CCCcCCHHHHHHHHHhcCCCCEEEE-------C----CcCCHHHHHHHHc--CCCEEEECC
Confidence 456666778766666 7765 34455544 45687766 2 2467777777653 666665543
No 157
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=42.27 E-value=31 Score=28.86 Aligned_cols=41 Identities=12% Similarity=0.260 Sum_probs=31.7
Q ss_pred HHHHHHHH-HHhcCCcEEEEEcCC--------chHHHHHHhcCCCCCEEEE
Q 012335 338 LASSAVRT-ANCIKAALILVLTRG--------GTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 338 ia~~av~~-a~~~~a~~Ivv~T~s--------G~ta~~vSk~RP~~PIiAv 379 (466)
.+...++. |.+.++++||+-++. |+++..+.+.-| |||+.+
T Consensus 106 ~~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a~-~PVlvV 155 (156)
T 3fg9_A 106 VDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAP-ISVIVV 155 (156)
T ss_dssp HHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHCS-SEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhCC-CCEEEe
Confidence 44555666 788999999998862 778888887765 999987
No 158
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=42.25 E-value=32 Score=33.36 Aligned_cols=63 Identities=17% Similarity=0.155 Sum_probs=46.4
Q ss_pred HHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHH--hcHHHHHhc-CCeeEEeC
Q 012335 185 EDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGV--ANFDDVLAN-SDAFMVAR 253 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av--~nideI~~~-sDgImiaR 253 (466)
+.+ +-+++.|+|+|.+-. -++++++++.+.+...+.+++| |---|+ +|+.++.+. .|+|-+|.
T Consensus 205 eea-~eal~aGaD~I~LDn-~~~~~~~~~v~~l~~~~~~v~i----eaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 205 EQL-DAVLPEKPELILLDN-FAVWQTQTAVQRRDSRAPTVML----ESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHH-HHHGGGCCSEEEEET-CCHHHHHHHHHHHHHHCTTCEE----EEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHH-HHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCeEE----EEECCCCHHHHHHHHhcCCCEEEECH
Confidence 344 456779999999887 5788999888888765445544 333344 789999988 89999875
No 159
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=42.23 E-value=84 Score=25.58 Aligned_cols=60 Identities=13% Similarity=0.085 Sum_probs=35.4
Q ss_pred HHHHhcCCcEEEEEc----CCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 344 RTANCIKAALILVLT----RGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 344 ~~a~~~~a~~Ivv~T----~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
+...+...++|++-. .+|.. .+.+.+..|.+||++++ . ..+... ..-.+--|+.-++..+
T Consensus 55 ~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s------~-----~~~~~~-~~~~~~~g~~~~l~Kp 119 (152)
T 3eul_A 55 ELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLIS------A-----HDEPAI-VYQALQQGAAGFLLKD 119 (152)
T ss_dssp HHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEE------S-----CCCHHH-HHHHHHTTCSEEEETT
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEE------c-----cCCHHH-HHHHHHcCCCEEEecC
Confidence 344455678777643 24433 45677778999999992 1 022222 2233456888888765
No 160
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=42.20 E-value=37 Score=35.74 Aligned_cols=176 Identities=18% Similarity=0.169 Sum_probs=98.9
Q ss_pred ChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhc--------------------------------CCCceEE
Q 012335 180 TEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVH--------------------------------AKNILLM 227 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~--------------------------------~~~~~Ii 227 (466)
+..|...+.++..+.|.+.-.++.+++++-++.+.+++... -..+.|+
T Consensus 232 ~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ 311 (511)
T 3gg8_A 232 SADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVIT 311 (511)
T ss_dssp SHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 57788888555556677888899999999999888776421 0123344
Q ss_pred E------eecCH-----HHHhcHHHHHhcCCeeEE----eCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHh
Q 012335 228 S------KVENL-----EGVANFDDVLANSDAFMV----ARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLES 292 (466)
Q Consensus 228 a------KIE~~-----~av~nideI~~~sDgImi----aRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeS 292 (466)
| +|+++ |.-+=...|+.-+|++|+ |.|++ |.| ....+.+|+..+.+.-- ..+.++.
T Consensus 312 ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~G~y----Pve-aV~~M~~I~~~aE~~~~----~~~~~~~ 382 (511)
T 3gg8_A 312 ATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGEF----PVI-TVETMARICYEAETCVD----YPALYRA 382 (511)
T ss_dssp ESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HHH-HHHHHHHHHHHHHTTCC----HHHHHHH
T ss_pred ehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCCC----HHH-HHHHHHHHHHHHHhchh----HHHHHhh
Confidence 4 55553 344446777777999999 55654 333 33445566665553210 0122322
Q ss_pred hhc-CC-CCCHHHHHhHHHh-hhhhcc--chhhHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHH
Q 012335 293 MIK-SP-RPTRAEATDVANA-AENFIN--YGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMV 367 (466)
Q Consensus 293 M~~-~p-~PTRAEvsDv~na-aE~~~~--~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~v 367 (466)
... .+ ..+.+|. ++.+ .+.+.. .... ..... -...|..+|+--....|+++|++-.++|.+
T Consensus 383 ~~~~~~~~~~~~~a--ia~aa~~~A~~l~a~aI----v~~T~--------SG~tA~~iSr~RP~~PIia~T~~~~~~r~l 448 (511)
T 3gg8_A 383 MCLAVPPPISTQEA--VARAAVETAECVNAAII----LALTE--------TGQTARLIAKYRPMQPILALSASESTIKHL 448 (511)
T ss_dssp HHHHSCSCCCHHHH--HHHHHHHHHHHHTCSEE----EEECS--------SSHHHHHHHHTCCSSCEEEEESCHHHHHHG
T ss_pred hhhcccCCCCHHHH--HHHHHHHHHHhcCCCEE----EEECC--------CchHHHHHHhhCCCCCEEEEcCCHHHHHHh
Confidence 221 12 2233332 3333 222111 0000 00000 012344555555555699999999999999
Q ss_pred HhcCCCCCEEE
Q 012335 368 SKYRPSMPILS 378 (466)
Q Consensus 368 Sk~RP~~PIiA 378 (466)
+=||--.|++.
T Consensus 449 ~L~~GV~p~~~ 459 (511)
T 3gg8_A 449 QVIRGVTTMQV 459 (511)
T ss_dssp GGSTTEEEEEC
T ss_pred hccCCeEEEEe
Confidence 99998777654
No 161
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=42.04 E-value=1.6e+02 Score=31.59 Aligned_cols=236 Identities=16% Similarity=0.186 Sum_probs=128.2
Q ss_pred cEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEecCCCccccCCcc-----------------
Q 012335 111 KMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVI----------------- 173 (466)
Q Consensus 111 ~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~Kgvnlp~~~----------------- 173 (466)
+.|++|.-.+--.|. .+-++++.+..+|. .+..+. .+-|.--++..+++|...
T Consensus 140 ~~ilidDG~i~l~V~---~~~~~~~~v~~~V~----~gG~L~---~~KgvNlPg~~~~lp~ltekD~~dl~f~~~~~vD~ 209 (606)
T 3t05_A 140 SYILLDDGLIELQVK---DIDHAKKEVKCDIL----NSGELK---NKKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDF 209 (606)
T ss_dssp CEEEETTTTEEEEEE---EEETTTTEEEEEEC----SCCEEE---TTCBEECSSSCCCCCSSCHHHHHHHHHHHHTTCSE
T ss_pred CEEEEeCCeEEEEEE---EEEecCCEEEEEEE----ECeEEe---CCceEECCCCccCCCCCChhHHHHHHHHHHcCCCE
Confidence 467776543322110 01234556666664 133332 234555566677777532
Q ss_pred --cCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcC------------------------------
Q 012335 174 --VDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHA------------------------------ 221 (466)
Q Consensus 174 --~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~------------------------------ 221 (466)
+++.. +..|...+.++..+.|.+.-.++.+++++-++.+.+++....
T Consensus 210 Ia~SFVr-~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~ 288 (606)
T 3t05_A 210 IAASFVR-RPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCN 288 (606)
T ss_dssp EEETTCC-SHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHH
T ss_pred EEECCCC-CHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHH
Confidence 12222 677888885555567778889999999999999888764211
Q ss_pred --CCceEEE------eecCH-----HHHhcHHHHHhcCCeeEEe----CCcccCcCCchhHHHHHHHHHHHHHHcCCCeE
Q 012335 222 --KNILLMS------KVENL-----EGVANFDDVLANSDAFMVA----RGDLGMEIPIEKIFLAQKVMIHKANIQGKPVV 284 (466)
Q Consensus 222 --~~~~Iia------KIE~~-----~av~nideI~~~sDgImia----RgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi 284 (466)
..+.|+| +|+++ |.-+=...|+.-+|++|+. .|+ +|.|- ...+.+|+..+.+.--
T Consensus 289 ~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~G~----yPvea-V~~m~~I~~~aE~~~~--- 360 (606)
T 3t05_A 289 KLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGL----YPEEA-VKTMRNIAVSAEAAQD--- 360 (606)
T ss_dssp HHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHSCS----CSHHH-HHHHHHHHHHHHHTSC---
T ss_pred HcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccCCC----CHHHH-HHHHHHHHHHHHhhhh---
Confidence 1233443 55553 4444467777779999997 454 34443 3456677776665421
Q ss_pred EeehhhHhhhcCCCCCHHHHHhHHHh-hhhhccchhhHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCchH
Q 012335 285 TATQMLESMIKSPRPTRAEATDVANA-AENFINYGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTT 363 (466)
Q Consensus 285 ~ATqmLeSM~~~p~PTRAEvsDv~na-aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~t 363 (466)
..+.++.....+.++.+|. ++.+ .+.+..... +-+..... -...|..+|+.-...-|+++|++-.+
T Consensus 361 -~~~~~~~~~~~~~~~~~~a--ia~aa~~~a~~l~a--~aIv~~T~--------sG~ta~~isr~RP~~pIia~t~~~~~ 427 (606)
T 3t05_A 361 -YKKLLSDRTKLVETSLVNA--IGISVAHTALNLNV--KAIVAATE--------SGSTARTISKYRPHSDIIAVTPSEET 427 (606)
T ss_dssp -HHHHHHHHHHHSCCCHHHH--HHHHHHHHHHHHTC--SEEEEECS--------SSHHHHHHHHTCCSSEEEEEESCHHH
T ss_pred -hHhhhhhhccccCCCHHHH--HHHHHHHHHHhcCC--CEEEEEcC--------CchHHHHHHhhCCCCCEEEEcCCHHH
Confidence 1223332222122333332 2333 121110000 00000000 01345556666666679999999999
Q ss_pred HHHHHhcCCCCCEEE
Q 012335 364 AKMVSKYRPSMPILS 378 (466)
Q Consensus 364 a~~vSk~RP~~PIiA 378 (466)
+|.++=||--.|++.
T Consensus 428 ~r~l~L~~GV~p~~~ 442 (606)
T 3t05_A 428 ARQCSIVWGVQPVVK 442 (606)
T ss_dssp HHHHHTSSSEEEEEC
T ss_pred HHhhhccCCeEEEEe
Confidence 999999987677664
No 162
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=41.87 E-value=21 Score=35.12 Aligned_cols=71 Identities=11% Similarity=0.038 Sum_probs=45.0
Q ss_pred HHHHhccCcCCCcEEEEcCCCC-----h-h--------hHHHHHHHHHhcCCCceEEE--eecCHHHHhcHHHHHhcCCe
Q 012335 185 EDILNWGVPNKIDMIALSFVRK-----G-S--------DLVEVRNLLRVHAKNILLMS--KVENLEGVANFDDVLANSDA 248 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV~s-----a-~--------dv~~~r~~l~~~~~~~~Iia--KIE~~~av~nideI~~~sDg 248 (466)
++. +.+.+.|+|+|.+|---. . . .+..+.++.... +++||+ -|-+..-+ +..+..=+|+
T Consensus 161 e~A-~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv--~kalalGAda 235 (336)
T 1ypf_A 161 EAV-RELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDV--AKSIRFGATM 235 (336)
T ss_dssp HHH-HHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHH--HHHHHTTCSE
T ss_pred HHH-HHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHH--HHHHHcCCCE
Confidence 355 556889999999953210 0 0 345555544432 688998 77776554 3333334899
Q ss_pred eEEeCCcccCcC
Q 012335 249 FMVARGDLGMEI 260 (466)
Q Consensus 249 ImiaRgDLg~e~ 260 (466)
+|+||.=|+.+-
T Consensus 236 V~iGr~~l~t~E 247 (336)
T 1ypf_A 236 VMIGSLFAGHEE 247 (336)
T ss_dssp EEESGGGTTCTT
T ss_pred EEeChhhhcccc
Confidence 999999996443
No 163
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=41.74 E-value=52 Score=27.83 Aligned_cols=41 Identities=22% Similarity=0.241 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhcCCCCCEEEE
Q 012335 338 LASSAVRTANCIKAALILVLTR---------GGTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 338 ia~~av~~a~~~~a~~Ivv~T~---------sG~ta~~vSk~RP~~PIiAv 379 (466)
.+...++.|.+.++++||+-++ -|+++..+.+.-| |||+.+
T Consensus 105 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a~-~PVLvV 154 (155)
T 3dlo_A 105 PPDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKAN-KPVICI 154 (155)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhCC-CCEEEe
Confidence 4455667788999999998774 3788888888655 999987
No 164
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=41.56 E-value=1.3e+02 Score=31.34 Aligned_cols=106 Identities=15% Similarity=0.206 Sum_probs=59.5
Q ss_pred hhcHHHHHhccCcCCCcEEEEcCCC-ChhhHHHHHHHHHhcCCCceEEE-eecCHHHHhcHHHHHhcCCeeEEeCCcccC
Q 012335 181 EKDKEDILNWGVPNKIDMIALSFVR-KGSDLVEVRNLLRVHAKNILLMS-KVENLEGVANFDDVLANSDAFMVARGDLGM 258 (466)
Q Consensus 181 e~D~~di~~~~~~~~~d~v~~sfV~-sa~dv~~~r~~l~~~~~~~~Iia-KIE~~~av~nideI~~~sDgImiaRgDLg~ 258 (466)
+.+.+.+ +..++.|+|.|.+.... ..+.+.++-+.+.+.-.+..|++ -+-+.+....+.+ .-+|+|.+|-|-=+.
T Consensus 255 ~d~~era-~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~--aGad~i~vg~g~gsi 331 (511)
T 3usb_A 255 ADAMTRI-DALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIE--AGANVVKVGIGPGSI 331 (511)
T ss_dssp TTHHHHH-HHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTT
T ss_pred cchHHHH-HHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHH--hCCCEEEECCCCccc
Confidence 3345566 56688999999986443 22333333333333333456665 6666665444332 238999986443111
Q ss_pred c-------CCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 259 E-------IPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 259 e-------~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
. .+.+.+ .+-..+.+.|++.+.|+|.+.-+-
T Consensus 332 ~~~~~~~g~g~p~~-~~l~~v~~~~~~~~iPVIa~GGI~ 369 (511)
T 3usb_A 332 CTTRVVAGVGVPQL-TAVYDCATEARKHGIPVIADGGIK 369 (511)
T ss_dssp CCHHHHHCCCCCHH-HHHHHHHHHHHTTTCCEEEESCCC
T ss_pred cccccccCCCCCcH-HHHHHHHHHHHhCCCcEEEeCCCC
Confidence 1 112222 334466677888899999877654
No 165
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=41.25 E-value=32 Score=36.32 Aligned_cols=178 Identities=18% Similarity=0.172 Sum_probs=100.7
Q ss_pred ChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcC--------------------------------CCceEE
Q 012335 180 TEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHA--------------------------------KNILLM 227 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~--------------------------------~~~~Ii 227 (466)
+..|...+.++..+.|-+.-.++.+++++-|+.+.+++.... ..+.|+
T Consensus 241 ~a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ 320 (520)
T 3khd_A 241 SADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIIT 320 (520)
T ss_dssp SHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 577888775555556777778899999999999988774211 112233
Q ss_pred E------eecCHH-----HHhcHHHHHhcCCeeEE----eCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHh
Q 012335 228 S------KVENLE-----GVANFDDVLANSDAFMV----ARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLES 292 (466)
Q Consensus 228 a------KIE~~~-----av~nideI~~~sDgImi----aRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeS 292 (466)
| +|+++. .-+=...|+.-+|++|+ |.|++ |.| ....+.+|+..+.+.- ..-+.++.
T Consensus 321 ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA~G~y----Pve-aV~~M~~I~~~aE~~~----~~~~~~~~ 391 (520)
T 3khd_A 321 ATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAGGKF----PVE-AVTIMSKICLEAEACI----DYKLLYQS 391 (520)
T ss_dssp CCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSC----HHH-HHHHHHHHHHHHHTTC----CHHHHHHH
T ss_pred eehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCcC----HHH-HHHHHHHHHHHHHhhh----hhhhhHhh
Confidence 3 566543 33336677778999999 56654 333 3345566666665431 11123332
Q ss_pred hh-cCCCC-CHHHHHhHHHh-hhhhccchhhHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHh
Q 012335 293 MI-KSPRP-TRAEATDVANA-AENFINYGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSK 369 (466)
Q Consensus 293 M~-~~p~P-TRAEvsDv~na-aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk 369 (466)
.. ..+.| +..|. ++.+ .+.+..... +-+..... -...|..+|+.-....|+++|++-.++|.++=
T Consensus 392 ~~~~~~~~~~~~~a--ia~aa~~~A~~l~a--~aIv~~T~--------SG~TA~~vSr~RP~~PIia~T~~~~~~r~l~L 459 (520)
T 3khd_A 392 LVNAIETPISVQEA--VARSAVETAESIQA--SLIIALTE--------TGYTARLIAKYKPSCTILALSASDSTVKCLNV 459 (520)
T ss_dssp HHHHSCSCCCHHHH--HHHHHHHHHHHTTC--SEEEEECS--------SSHHHHHHHHTCCSSEEEEEESCHHHHHHGGG
T ss_pred hhhccCCCCCHHHH--HHHHHHHHHHhcCC--CEEEEECC--------CcHHHHHHHhcCCCCCEEEEcCCHHHHHHHhc
Confidence 22 22222 33332 3333 222211000 00000000 01345556666666779999999999999999
Q ss_pred cCCCCCEEE
Q 012335 370 YRPSMPILS 378 (466)
Q Consensus 370 ~RP~~PIiA 378 (466)
+|--.|++.
T Consensus 460 ~~GV~p~~~ 468 (520)
T 3khd_A 460 HRGVTCIKV 468 (520)
T ss_dssp STTEEEEEC
T ss_pred cCCeEEEEe
Confidence 998777764
No 166
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=41.17 E-value=51 Score=32.53 Aligned_cols=57 Identities=16% Similarity=0.243 Sum_probs=36.2
Q ss_pred CCCCCHHHHHHHHHhCCceEEEecCCCCHH------HHHHHHHHHHHH---HHHcCCceEEEecCCCC
Q 012335 19 PASRSVEMAEKLLRAGMNVARFNFSHGSHA------YHQETLDNLRTA---MNNTGILCAVMLDTKGP 77 (466)
Q Consensus 19 p~~~~~~~l~~li~~G~~v~RiN~shg~~~------~~~~~i~~ir~~---~~~~~~~i~i~~Dl~Gp 77 (466)
+.....+.++.|-+.|+|++||-++..... .....++.++++ +.+.| +.+++|+-..
T Consensus 59 ~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G--i~vild~H~~ 124 (380)
T 1edg_A 59 GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNK--MYVILNTHHD 124 (380)
T ss_dssp CSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTT--CEEEEECCSC
T ss_pred CCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCC--CEEEEeCCCc
Confidence 334568899999999999999988754211 112234444444 33444 5688888753
No 167
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=40.95 E-value=25 Score=31.61 Aligned_cols=64 Identities=11% Similarity=0.022 Sum_probs=43.3
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCH-HHHhcHHHHHhc-CCeeEEeCC
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENL-EGVANFDDVLAN-SDAFMVARG 254 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~-~av~nideI~~~-sDgImiaRg 254 (466)
+.+.+.|+|+|.++.....+++.++.+.+.+.|. +++.-+-++ ..++.+..+.+. +|.|.+.+|
T Consensus 71 ~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~--~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g 136 (211)
T 3f4w_A 71 QLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGK--QVVVDMICVDDLPARVRLLEEAGADMLAVHTG 136 (211)
T ss_dssp HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTC--EEEEECTTCSSHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCC--eEEEEecCCCCHHHHHHHHHHcCCCEEEEcCC
Confidence 5567899999999866555778888888887653 444322111 224556777777 899888765
No 168
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=40.83 E-value=24 Score=28.77 Aligned_cols=41 Identities=12% Similarity=-0.040 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEE
Q 012335 338 LASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 338 ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk~RP~~PIiAv 379 (466)
.+...++.|.+.++++||+-++.-+++..+.+.-| |||+.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~g~sv~~~vl~~a~-~PVlvv 137 (138)
T 1q77_A 97 LSEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLN-LASLIV 137 (138)
T ss_dssp HHHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHSS-SEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHhCC-CceEee
Confidence 34455677889999988887764366777777766 999986
No 169
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=40.78 E-value=84 Score=31.92 Aligned_cols=99 Identities=17% Similarity=0.211 Sum_probs=54.9
Q ss_pred HHHHhccCcCCCcEEEE--cCCCChhhHHHHHHHHHhcCCCceEEE-eecCHHHHhcHHHHHhc-CCeeEEeCC--cccC
Q 012335 185 EDILNWGVPNKIDMIAL--SFVRKGSDLVEVRNLLRVHAKNILLMS-KVENLEGVANFDDVLAN-SDAFMVARG--DLGM 258 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~--sfV~sa~dv~~~r~~l~~~~~~~~Iia-KIE~~~av~nideI~~~-sDgImiaRg--DLg~ 258 (466)
+.+ +.+++.|+|+|.+ +|-.+....+.++.+-... +++|++ .+-+.+.... +.++ +|+|.++-| ..+.
T Consensus 147 e~~-~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~--~i~Vi~g~V~t~e~A~~---a~~aGAD~I~vG~g~Gs~~~ 220 (400)
T 3ffs_A 147 ERA-KLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKE---LIENGADGIKVGIGPGSICT 220 (400)
T ss_dssp HHH-HHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTC--CCEEEEEEECSHHHHHH---HHHTTCSEEEECC-------
T ss_pred HHH-HHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcC--CCeEEEeecCCHHHHHH---HHHcCCCEEEEeCCCCcCcc
Confidence 345 5568899999987 6654433334444432222 578886 5666554433 3344 899999532 1110
Q ss_pred -----cCCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 259 -----EIPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 259 -----e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
..+.+. ..+-.++.+.|++.+.|||-+.-+-
T Consensus 221 tr~~~g~g~p~-~~al~~v~~~~~~~~IPVIA~GGI~ 256 (400)
T 3ffs_A 221 TRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGIR 256 (400)
T ss_dssp --CCSCBCCCH-HHHHHHHHHHHTTTTCCEEEESCCC
T ss_pred cccccccchhH-HHHHHHHHHHHHhcCCCEEecCCCC
Confidence 011122 2333555666666799999877654
No 170
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=40.70 E-value=53 Score=31.59 Aligned_cols=129 Identities=16% Similarity=0.166 Sum_probs=71.8
Q ss_pred CCChhcHHHHHhccCcCCCcEEEEcC-CCCh-----hhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-CCeeE
Q 012335 178 TLTEKDKEDILNWGVPNKIDMIALSF-VRKG-----SDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-SDAFM 250 (466)
Q Consensus 178 ~lte~D~~di~~~~~~~~~d~v~~sf-V~sa-----~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-sDgIm 250 (466)
.++..++..|.+...+.|+|+|=+.| +... .|..++.+.+.+. .++++.+-..+.+++ +..+++ .|.|.
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~i---~~a~~ag~~~v~ 98 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF-PGINYPVLTPNLKGF---EAAVAAGAKEVV 98 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC-TTCBCCEECCSHHHH---HHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC-CCCEEEEEcCCHHhH---HHHHHCCCCEEE
Confidence 36677777765677789999988864 3331 4555555555442 244444444454443 333333 46544
Q ss_pred E--eCCcc----cCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh
Q 012335 251 V--ARGDL----GMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 310 (466)
Q Consensus 251 i--aRgDL----g~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na 310 (466)
| +-.|. -...+.++....-++.++.|+++|++|-+..-+-=|-....+-+..++.+++.+
T Consensus 99 i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~ 164 (298)
T 2cw6_A 99 IFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKK 164 (298)
T ss_dssp EEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHH
T ss_pred EEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHH
Confidence 4 32332 112345667777788999999999998643211100001113355667777666
No 171
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=40.08 E-value=74 Score=31.76 Aligned_cols=68 Identities=15% Similarity=0.337 Sum_probs=48.8
Q ss_pred hhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 207 GSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 207 a~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
.++...++++..+. .+.+++-+=+.++++-+.+. -.|.+=||-+|+-. + .+++.+.+.|||||+.
T Consensus 90 ~e~~~~L~~~~~~~--Gi~~~st~~d~~svd~l~~~--~v~~~KI~S~~~~n------~-----~LL~~va~~gkPviLs 154 (349)
T 2wqp_A 90 EEDEIKLKEYVESK--GMIFISTLFSRAAALRLQRM--DIPAYKIGSGECNN------Y-----PLIKLVASFGKPIILS 154 (349)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHH--TCSCEEECGGGTTC------H-----HHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHHHHh--CCeEEEeeCCHHHHHHHHhc--CCCEEEECcccccC------H-----HHHHHHHhcCCeEEEE
Confidence 45667777777664 47788877777777655542 16999999888852 2 2366677789999999
Q ss_pred ehh
Q 012335 287 TQM 289 (466)
Q Consensus 287 Tqm 289 (466)
|-|
T Consensus 155 tGm 157 (349)
T 2wqp_A 155 TGM 157 (349)
T ss_dssp CTT
T ss_pred CCC
Confidence 986
No 172
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=39.99 E-value=59 Score=29.40 Aligned_cols=53 Identities=11% Similarity=0.061 Sum_probs=33.3
Q ss_pred CCCCCeEEEEecCCCCCCH---HHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Q 012335 6 QNSPKTKIVCTLGPASRSV---EMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRT 59 (466)
Q Consensus 6 ~~~r~tkIi~TiGp~~~~~---~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~ 59 (466)
|+.+.-|+.. |-|+..+. +.+++++++|++.+-+.--..+.++..++++.+++
T Consensus 12 ~~~~~~~l~~-It~~~~~~~~l~~~~~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~ 67 (221)
T 1yad_A 12 PRGSHMELHA-ITDDSKPVEELARIIITIQNEVDFIHIRERSKSAADILKLLDLIFE 67 (221)
T ss_dssp -----CEEEE-ECCSCSCHHHHHHHHHHHGGGCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCccCccEEE-EECCCcCcchHHHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHH
Confidence 3445566654 55654333 34677889999998776656777877777777775
No 173
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=39.98 E-value=1.1e+02 Score=27.97 Aligned_cols=110 Identities=6% Similarity=-0.035 Sum_probs=64.7
Q ss_pred cHHHHHhccCcCCCcEEEEcCC-----CChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-----CCeeEEe
Q 012335 183 DKEDILNWGVPNKIDMIALSFV-----RKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-----SDAFMVA 252 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~sfV-----~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-----sDgImia 252 (466)
+.++..+.+.+.|+|+|=+... .+.+++.++++.+.+.|-.+..+.-- ..+.++.++..++. ++.|.+.
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPI-YMKSEEEIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEE-EECSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecc-ccCCHHHHHHHHHHHHHhCCCEEEec
Confidence 3444437788999999988753 36788999999999887443322211 00234444444443 3556554
Q ss_pred CCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhh--cCCCCCHHHHHhHHH
Q 012335 253 RGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMI--KSPRPTRAEATDVAN 309 (466)
Q Consensus 253 RgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~--~~p~PTRAEvsDv~n 309 (466)
+| . ..-+++...|.++|..+.+ |-+- .....|-.|+-++..
T Consensus 110 p~-------~----~~l~~l~~~a~~~gv~l~l-----En~~~~~~~~~~~~~~~~ll~ 152 (257)
T 3lmz_A 110 PN-------Y----ELLPYVDKKVKEYDFHYAI-----HLHGPDIKTYPDATDVWVHTK 152 (257)
T ss_dssp EC-------G----GGHHHHHHHHHHHTCEEEE-----ECCCTTCSSSCSHHHHHHHHT
T ss_pred CC-------H----HHHHHHHHHHHHcCCEEEE-----ecCCCcccccCCHHHHHHHHH
Confidence 43 1 2336778888888876553 3331 223456666666654
No 174
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=39.94 E-value=43 Score=30.46 Aligned_cols=83 Identities=18% Similarity=0.117 Sum_probs=48.2
Q ss_pred hccCcCCCcEEEEcCCCC-----hhhHHHHHHHHHhcCCCceEEE--eecCHHHHhcHHHHHhc-CCeeEEeCCcccCcC
Q 012335 189 NWGVPNKIDMIALSFVRK-----GSDLVEVRNLLRVHAKNILLMS--KVENLEGVANFDDVLAN-SDAFMVARGDLGMEI 260 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~s-----a~dv~~~r~~l~~~~~~~~Iia--KIE~~~av~nideI~~~-sDgImiaRgDLg~e~ 260 (466)
+.+.+.|+|+|.+.-+.. .-+...++++.... +++|++ =|.+ .+|+.+.+++ +||+++|++=+....
T Consensus 161 ~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~--~~pvia~GGi~~---~~~~~~~~~~Ga~~v~vgsal~~~~~ 235 (253)
T 1h5y_A 161 KEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSV--RIPVIASGGAGR---VEHFYEAAAAGADAVLAASLFHFRVL 235 (253)
T ss_dssp HHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHHTTSS
T ss_pred HHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhc--CCCEEEeCCCCC---HHHHHHHHHcCCcHHHHHHHHHcCCC
Confidence 455778999998754331 12444555444332 456665 2333 2566666665 899999986555444
Q ss_pred CchhHHHHHHHHHHHHHHcCCCe
Q 012335 261 PIEKIFLAQKVMIHKANIQGKPV 283 (466)
Q Consensus 261 ~~e~v~~~qk~ii~~~~~~gkPv 283 (466)
++ +++.+.++++|.|+
T Consensus 236 ~~-------~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 236 SI-------AQVKRYLKERGVEV 251 (253)
T ss_dssp CH-------HHHHHHHHHTTCBC
T ss_pred CH-------HHHHHHHHHcCCCC
Confidence 43 34444556666654
No 175
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=39.60 E-value=88 Score=29.19 Aligned_cols=68 Identities=15% Similarity=0.192 Sum_probs=48.3
Q ss_pred hHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 209 DLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 209 dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
-++.+++.+.+.+.++.+.+--+... -+|++++++-+|.|+-+-.++ ..+..+-+.|++.++|.|.+.
T Consensus 83 Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~----------~~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 83 KSQVSQQRLTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTDNM----------ATRQEINAACVALNTPLITAS 150 (251)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSSH----------HHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCCH----------HHHHHHHHHHHHhCCCEEEEe
Confidence 35666777777777777766544332 257888888899888763322 356788899999999988764
No 176
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=39.32 E-value=49 Score=32.66 Aligned_cols=46 Identities=17% Similarity=0.205 Sum_probs=33.2
Q ss_pred HHHHHHH-hCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 26 MAEKLLR-AGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 26 ~l~~li~-~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
..+++++ +|.+.+.+++.|++.+.-.+.++.+|++. |..+.|++|.
T Consensus 149 ~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDa 195 (370)
T 1nu5_A 149 SALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---GDRASVRVDV 195 (370)
T ss_dssp HHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---GGGCEEEEEC
T ss_pred HHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc---CCCCEEEEEC
Confidence 3456777 99999999999998887777777777654 2223455554
No 177
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=39.30 E-value=41 Score=28.74 Aligned_cols=40 Identities=15% Similarity=0.336 Sum_probs=29.7
Q ss_pred HHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhcCCCCCEEEE
Q 012335 339 ASSAVRTANCIKAALILVLTR---------GGTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 339 a~~av~~a~~~~a~~Ivv~T~---------sG~ta~~vSk~RP~~PIiAv 379 (466)
+...++.|.+.++++||+-++ -|+++..+.+.-| |||+.+
T Consensus 113 ~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~-~pVlvv 161 (175)
T 2gm3_A 113 KDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAE-CPVMTI 161 (175)
T ss_dssp HHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCC-CCEEEE
Confidence 445556788889999998875 2567777777765 999999
No 178
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=39.21 E-value=74 Score=25.01 Aligned_cols=62 Identities=13% Similarity=0.119 Sum_probs=35.4
Q ss_pred HHHHHHhcCCcEEEEEc----CCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 342 AVRTANCIKAALILVLT----RGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 342 av~~a~~~~a~~Ivv~T----~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
|.+...+...++|++-. .+|.. .+.+.+..|.+||++++ . ..+... ..-.+-.|+.-++..+
T Consensus 43 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t------~-----~~~~~~-~~~~~~~g~~~~l~KP 109 (130)
T 3eod_A 43 ALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVIS------A-----TENMAD-IAKALRLGVEDVLLKP 109 (130)
T ss_dssp HHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEE------C-----CCCHHH-HHHHHHHCCSEEEESC
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEE------c-----CCCHHH-HHHHHHcCCCEEEeCC
Confidence 33444556677766632 34543 45676778999999992 1 022222 2233456888887765
No 179
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=39.20 E-value=60 Score=31.95 Aligned_cols=46 Identities=20% Similarity=0.339 Sum_probs=33.0
Q ss_pred HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 26 MAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 26 ~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
..+++.+.|-+.+.+++.|++.+.-.+.++.+|++. |..+.|++|.
T Consensus 147 ~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~---g~~~~l~vDa 192 (366)
T 1tkk_A 147 DAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV---GSAVKLRLDA 192 (366)
T ss_dssp HHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH---CSSSEEEEEC
T ss_pred HHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh---CCCCeEEEEC
Confidence 345678899999999999988777677777777653 3334455554
No 180
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=39.11 E-value=42 Score=31.54 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=43.0
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhc---------CCCceEEEeecCHHHHhcHHHHHhcCCeeEE
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVH---------AKNILLMSKVENLEGVANFDDVLANSDAFMV 251 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~---------~~~~~IiaKIE~~~av~nideI~~~sDgImi 251 (466)
+.+.+.|+|+|.+..-.+ +++..+.+.+.+. |..+.+...-+|+ ++.+++++...|.|++
T Consensus 86 ~~~~~aGAd~itvH~ea~-~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlv 154 (237)
T 3cu2_A 86 KAVVANGANLVTLQLEQY-HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQL 154 (237)
T ss_dssp HHHHHTTCSEEEEETTCT-TSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEE
T ss_pred HHHHHcCCCEEEEecCCc-ccHHHHHHHHHhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeee
Confidence 556889999998876555 5677777777766 5444554444554 6778888888998876
No 181
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=38.88 E-value=51 Score=26.81 Aligned_cols=41 Identities=12% Similarity=0.108 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC------chHHHHHHhcCCCCCEEEE
Q 012335 338 LASSAVRTANCIKAALILVLTRG------GTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 338 ia~~av~~a~~~~a~~Ivv~T~s------G~ta~~vSk~RP~~PIiAv 379 (466)
.+...++.|.+.++++||+-++. |+++..+.+.-| |||+.+
T Consensus 90 ~~~~I~~~a~~~~~dliV~G~~~~~~~~lgs~~~~vl~~~~-~pVlvv 136 (141)
T 1jmv_A 90 LGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIK-IDMLVV 136 (141)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCHHHHHHHHHHHHTTCC-SEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCchhhhhcchHHHHHhcCC-CCEEEe
Confidence 44555677889999999998762 345666766655 999998
No 182
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=38.82 E-value=1.2e+02 Score=33.40 Aligned_cols=102 Identities=18% Similarity=0.149 Sum_probs=71.4
Q ss_pred ChhcHHHHHhccCcCCCcEEEE-------------------cCCCCh--hhHHHHHHHHHhcCCCceEEEeecCHHHHhc
Q 012335 180 TEKDKEDILNWGVPNKIDMIAL-------------------SFVRKG--SDLVEVRNLLRVHAKNILLMSKVENLEGVAN 238 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~-------------------sfV~sa--~dv~~~r~~l~~~~~~~~IiaKIE~~~av~n 238 (466)
++.-++-| .||.++|++||.+ +|++-- -|+.+|-+|-.++ .+.|+.--|+..++.|
T Consensus 370 te~~K~YI-DFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~n 446 (738)
T 2d73_A 370 TANVKRYI-DFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVRN 446 (738)
T ss_dssp HHHHHHHH-HHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchhh
Confidence 55667788 9999999999999 222111 2599999998874 6999999999875444
Q ss_pred ----HHHHHhc-----CCeeEEeC-CcccCcCCc----hhHHHHHHHHHHHHHHcCCCeEE
Q 012335 239 ----FDDVLAN-----SDAFMVAR-GDLGMEIPI----EKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 239 ----ideI~~~-----sDgImiaR-gDLg~e~~~----e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
+|+..+. ..||-++= ||. ++-+- +.+-....++++.|.+++.-|..
T Consensus 447 ~e~~~d~~f~~~~~~Gv~GVKvdF~g~~-~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnf 506 (738)
T 2d73_A 447 YERHMDKAYQFMADNGYNSVKSGYVGNI-IPRGEHHYGQWMNNHYLYAVKKAADYKIMVNA 506 (738)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECCSSC-BSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCccccC-cCCcccccchHHHHHHHHHHHHHHHcCcEEEc
Confidence 4555554 36887751 221 11111 45778889999999999987774
No 183
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=38.74 E-value=29 Score=35.13 Aligned_cols=67 Identities=18% Similarity=0.186 Sum_probs=41.4
Q ss_pred HHHHhccCcCCCcEEEEcCCC------ChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc----CCeeEEeCC
Q 012335 185 EDILNWGVPNKIDMIALSFVR------KGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN----SDAFMVARG 254 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV~------sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~----sDgImiaRg 254 (466)
++. +.+.+.|+|+|.+|--- ....+..+.++....+.+++||+- -|+.+-.+++++ +|++||||.
T Consensus 264 e~A-~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~----GGI~~g~Dv~kalalGAd~V~iGr~ 338 (392)
T 2nzl_A 264 DDA-REAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLD----GGVRKGTDVLKALALGAKAVFVGRP 338 (392)
T ss_dssp HHH-HHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEEC----SSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHH-HHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEE----CCCCCHHHHHHHHHhCCCeeEECHH
Confidence 344 55678999999996321 123444444444333446888872 355555555554 899999984
Q ss_pred cc
Q 012335 255 DL 256 (466)
Q Consensus 255 DL 256 (466)
=|
T Consensus 339 ~l 340 (392)
T 2nzl_A 339 IV 340 (392)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 184
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=38.70 E-value=57 Score=32.58 Aligned_cols=62 Identities=13% Similarity=0.225 Sum_probs=39.9
Q ss_pred CeEEEEecCCC--CCCHHH----HHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 10 KTKIVCTLGPA--SRSVEM----AEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 10 ~tkIi~TiGp~--~~~~~~----l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
+....++.|.. ..+++. .+++.++|.+.+.|+..|++.+.-.+.++.+|++. |..+.|++|.
T Consensus 150 ~v~~y~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDa 217 (392)
T 1tzz_A 150 RVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI---GKDAQLAVDA 217 (392)
T ss_dssp EEEEEEECCCC----CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH---TTTCEEEEEC
T ss_pred CeeEEEeCCcccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc---CCCCeEEEEC
Confidence 34555554431 124433 46678899999999999988877777777777654 3334555555
No 185
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=38.42 E-value=69 Score=29.61 Aligned_cols=105 Identities=15% Similarity=0.166 Sum_probs=59.2
Q ss_pred cHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEee------c-------CHHHHhcHHHHHhcCCee
Q 012335 183 DKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKV------E-------NLEGVANFDDVLANSDAF 249 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKI------E-------~~~av~nideI~~~sDgI 249 (466)
|.+.+.+.+.+.|++.++.+- .+.++...+.++....+.++...+-| . +.+.++.+.+.+.....-
T Consensus 21 ~~~~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~~~i~~~~GihP~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 99 (272)
T 2y1h_A 21 DLDDVLEKAKKANVVALVAVA-EHSGEFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDR 99 (272)
T ss_dssp THHHHHHHHHHTTEEEEEECC-SSGGGHHHHHHHHHHTTTTEEEEECCCSBC-------CBCCHHHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHCCCCEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEEEECCCccccccccccCCHHHHHHHHHHHHhCCCC
Confidence 444443566789999877663 34677777777665543222222222 1 123444444444322122
Q ss_pred EEeCCcccCcCC--c--h-hHHHHH----HHHHHHHHHcCCCeEEeeh
Q 012335 250 MVARGDLGMEIP--I--E-KIFLAQ----KVMIHKANIQGKPVVTATQ 288 (466)
Q Consensus 250 miaRgDLg~e~~--~--e-~v~~~q----k~ii~~~~~~gkPvi~ATq 288 (466)
.+|=|..|.+.. . . .....| +..++.|.+.|+||++=|.
T Consensus 100 ~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~ 147 (272)
T 2y1h_A 100 LLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSR 147 (272)
T ss_dssp CSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECT
T ss_pred EEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 345577787762 1 1 123445 4677889999999998663
No 186
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=38.39 E-value=1.1e+02 Score=28.51 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=26.5
Q ss_pred HHHhcCCcEEEEEcCC---------chHHHHHHhcCCCCCEEEE
Q 012335 345 TANCIKAALILVLTRG---------GTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 345 ~a~~~~a~~Ivv~T~s---------G~ta~~vSk~RP~~PIiAv 379 (466)
.+.+.++++||+-++. |+++..+.+.-| |||+.+
T Consensus 118 ~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv 160 (294)
T 3loq_A 118 IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSK-VPVYIF 160 (294)
T ss_dssp HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCS-SCEEEE
T ss_pred eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCC-CCEEEe
Confidence 6788899998887753 456667777766 999998
No 187
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=38.14 E-value=76 Score=31.48 Aligned_cols=101 Identities=8% Similarity=0.067 Sum_probs=67.4
Q ss_pred CChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc--CCeeEEeCCcc
Q 012335 179 LTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN--SDAFMVARGDL 256 (466)
Q Consensus 179 lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~--sDgImiaRgDL 256 (466)
++..+...+.+...+.|+++|=-|+ .++|+..++++-... .++|++ =|+....+.+.++++. +|+|++.++-+
T Consensus 201 ~~~~~a~~~~~~l~~~~i~~iEqP~--~~~~~~~~~~l~~~~--~iPI~~-de~i~~~~~~~~~i~~~~~d~v~ik~~~~ 275 (384)
T 2pgw_A 201 WSVHDAINMCRKLEKYDIEFIEQPT--VSWSIPAMAHVREKV--GIPIVA-DQAAFTLYDVYEICRQRAADMICIGPREI 275 (384)
T ss_dssp CCHHHHHHHHHHHGGGCCSEEECCS--CTTCHHHHHHHHHHC--SSCEEE-STTCCSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEeCCC--ChhhHHHHHHHHhhC--CCCEEE-eCCcCCHHHHHHHHHcCCCCEEEEcchhh
Confidence 3444443332555678999999887 456777666654332 466554 5776667778888854 79999977665
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHh
Q 012335 257 GMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLES 292 (466)
Q Consensus 257 g~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeS 292 (466)
|- +.--.+++..|+++|.++.+.+ |+||
T Consensus 276 GG-------it~~~~i~~~A~~~g~~~~~~~-~~es 303 (384)
T 2pgw_A 276 GG-------IQPMMKAAAVAEAAGLKICIHS-SFTT 303 (384)
T ss_dssp TS-------HHHHHHHHHHHHHTTCCEEECC-CSCC
T ss_pred CC-------HHHHHHHHHHHHHCCCeEeecc-CcCC
Confidence 53 2334679999999999988753 4443
No 188
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=38.03 E-value=49 Score=32.73 Aligned_cols=73 Identities=15% Similarity=0.104 Sum_probs=42.8
Q ss_pred CChhcHHHHHhccCcCCCcEEEEcC--C--------CChhhH---HHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc
Q 012335 179 LTEKDKEDILNWGVPNKIDMIALSF--V--------RKGSDL---VEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN 245 (466)
Q Consensus 179 lte~D~~di~~~~~~~~~d~v~~sf--V--------~sa~dv---~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~ 245 (466)
++..|...+.+...+.|+|+|-+|- . ....++ ..+|+.+ +++|++- ......++.+++++.
T Consensus 236 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~~-Ggi~t~e~a~~~l~~ 309 (349)
T 3hgj_A 236 WSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-----GLRTGAV-GLITTPEQAETLLQA 309 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-----CCEEEEC-SSCCCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-----CceEEEE-CCCCCHHHHHHHHHC
Confidence 3444544443555678999999983 1 111233 3344433 4666652 322234566777775
Q ss_pred --CCeeEEeCCccc
Q 012335 246 --SDAFMVARGDLG 257 (466)
Q Consensus 246 --sDgImiaRgDLg 257 (466)
+|+|++||+=|.
T Consensus 310 G~aD~V~iGR~~la 323 (349)
T 3hgj_A 310 GSADLVLLGRVLLR 323 (349)
T ss_dssp TSCSEEEESTHHHH
T ss_pred CCceEEEecHHHHh
Confidence 799999998664
No 189
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=38.02 E-value=66 Score=31.73 Aligned_cols=54 Identities=17% Similarity=0.228 Sum_probs=34.5
Q ss_pred CCCHHHHHHHHHhCCceEEEecCCCC-----HH--HHHHHHHHHHHH---HHHcCCceEEEecCCC
Q 012335 21 SRSVEMAEKLLRAGMNVARFNFSHGS-----HA--YHQETLDNLRTA---MNNTGILCAVMLDTKG 76 (466)
Q Consensus 21 ~~~~~~l~~li~~G~~v~RiN~shg~-----~~--~~~~~i~~ir~~---~~~~~~~i~i~~Dl~G 76 (466)
..+.+.++.|-+.|+|++||-++... .. .....++.++++ +.+.| +.+++|+-.
T Consensus 62 ~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~G--i~vildlH~ 125 (376)
T 3ayr_A 62 KTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNG--AFVILNLHH 125 (376)
T ss_dssp CCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEEECCS
T ss_pred cCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 34688999999999999999887532 10 112234444444 33444 567889875
No 190
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=37.68 E-value=1.2e+02 Score=31.34 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=58.7
Q ss_pred hhcHHHHHhccCcCCCcEEEEc--CCCChhhHHHHHHHHHhcCCCceEEEe-ecCHHHHhcHHHHHhc-CCeeEEeCCcc
Q 012335 181 EKDKEDILNWGVPNKIDMIALS--FVRKGSDLVEVRNLLRVHAKNILLMSK-VENLEGVANFDDVLAN-SDAFMVARGDL 256 (466)
Q Consensus 181 e~D~~di~~~~~~~~~d~v~~s--fV~sa~dv~~~r~~l~~~~~~~~IiaK-IE~~~av~nideI~~~-sDgImiaRgDL 256 (466)
+.+.+.+ +..++.|+|+|.+- +-.+....+.++. +.+.-.++.|++. +-+.+.... ..++ +|+|.|+-|.=
T Consensus 228 ~~~~~~a-~~l~~aG~d~I~id~a~g~~~~~~~~v~~-i~~~~p~~~Vi~g~v~t~e~a~~---l~~aGaD~I~vg~g~G 302 (490)
T 4avf_A 228 ADTGERV-AALVAAGVDVVVVDTAHGHSKGVIERVRW-VKQTFPDVQVIGGNIATAEAAKA---LAEAGADAVKVGIGPG 302 (490)
T ss_dssp TTHHHHH-HHHHHTTCSEEEEECSCCSBHHHHHHHHH-HHHHCTTSEEEEEEECSHHHHHH---HHHTTCSEEEECSSCS
T ss_pred cchHHHH-HHHhhcccceEEecccCCcchhHHHHHHH-HHHHCCCceEEEeeeCcHHHHHH---HHHcCCCEEEECCCCC
Confidence 3455666 56688999999864 2223322233333 2222235777776 777665543 3333 89999964331
Q ss_pred cC-------cCCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 257 GM-------EIPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 257 g~-------e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
+. ..+.+.+ .+-.++.+.|++.++|+|.+.-+-
T Consensus 303 s~~~t~~~~g~g~p~~-~~l~~v~~~~~~~~iPVIa~GGI~ 342 (490)
T 4avf_A 303 SICTTRIVAGVGVPQI-SAIANVAAALEGTGVPLIADGGIR 342 (490)
T ss_dssp TTCHHHHHTCBCCCHH-HHHHHHHHHHTTTTCCEEEESCCC
T ss_pred cCCCccccCCCCccHH-HHHHHHHHHhccCCCcEEEeCCCC
Confidence 11 1122222 333566667777799999877653
No 191
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=37.46 E-value=62 Score=30.17 Aligned_cols=60 Identities=17% Similarity=0.149 Sum_probs=44.1
Q ss_pred hccCcCCCcEEEEcCCC-ChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEE
Q 012335 189 NWGVPNKIDMIALSFVR-KGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMV 251 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~-sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImi 251 (466)
+.+.+.|+|+|.+..-. + .++.++.+.+++.|..+.+.-.-.|+ ++.+++++...|.|++
T Consensus 74 ~~~~~aGAd~itvh~Ea~~-~~~~~~i~~i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~Vlv 134 (231)
T 3ctl_A 74 AQLARAGADFITLHPETIN-GQAFRLIDEIRRHDMKVGLILNPETP--VEAMKYYIHKADKITV 134 (231)
T ss_dssp HHHHHHTCSEEEECGGGCT-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEE
T ss_pred HHHHHcCCCEEEECcccCC-ccHHHHHHHHHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEE
Confidence 34478999999988644 4 46788888888877666665555554 7778889999998874
No 192
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=37.46 E-value=66 Score=29.84 Aligned_cols=87 Identities=15% Similarity=0.148 Sum_probs=57.0
Q ss_pred HHHHhccCcCCCcEEEE-----cCCCCh----hhHHHHHHHHHhcCCCceEEE--eecCHHHHhcHHHHHhc-CCeeEEe
Q 012335 185 EDILNWGVPNKIDMIAL-----SFVRKG----SDLVEVRNLLRVHAKNILLMS--KVENLEGVANFDDVLAN-SDAFMVA 252 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~-----sfV~sa----~dv~~~r~~l~~~~~~~~Iia--KIE~~~av~nideI~~~-sDgImia 252 (466)
+++ +...+.|+|++-+ .||.+- +-++++|+.. |.+..+-+ ++++++. -++...++ +|.|-|-
T Consensus 21 ~~i-~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~---~~~~~~dvhLmv~~p~~--~i~~~~~aGad~itvH 94 (228)
T 3ovp_A 21 AEC-LRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQL---GQDPFFDMHMMVSKPEQ--WVKPMAVAGANQYTFH 94 (228)
T ss_dssp HHH-HHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHH---CSSSCEEEEEECSCGGG--GHHHHHHHTCSEEEEE
T ss_pred HHH-HHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhh---CCCCcEEEEEEeCCHHH--HHHHHHHcCCCEEEEc
Confidence 344 4556789999999 887543 5566666653 22344443 6788864 36777665 7999885
Q ss_pred CCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 253 RGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 253 RgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
.|-+. . -.+.++.++++|+.++++.
T Consensus 95 -----~Ea~~-~----~~~~i~~i~~~G~k~gval 119 (228)
T 3ovp_A 95 -----LEATE-N----PGALIKDIRENGMKVGLAI 119 (228)
T ss_dssp -----GGGCS-C----HHHHHHHHHHTTCEEEEEE
T ss_pred -----cCCch-h----HHHHHHHHHHcCCCEEEEE
Confidence 12211 2 2577888899999999875
No 193
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=37.43 E-value=2e+02 Score=26.01 Aligned_cols=97 Identities=14% Similarity=0.184 Sum_probs=54.6
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEee------c-CHHHHhcHHHHHhcCCeeEEeCCcccCcCC
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKV------E-NLEGVANFDDVLANSDAFMVARGDLGMEIP 261 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKI------E-~~~av~nideI~~~sDgImiaRgDLg~e~~ 261 (466)
+.+.+.|++.+...- .+.++...+.++..+.. ++....-+ + +.+.++.+++.+.....-.+|=|..|.+..
T Consensus 26 ~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~iGEiGld~~ 103 (259)
T 1zzm_A 26 QRAAQAGVGKIIVPA-TEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLF 103 (259)
T ss_dssp HHHHHTTEEEEEEEC-CSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEEEEEEEECC
T ss_pred HHHHHcCCCEEEEec-CCHHHHHHHHHHHHhCC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEEEEeccCCC
Confidence 566789999776542 34678888777665433 33222222 1 123455555555432122344466666653
Q ss_pred ch-hHHHHH----HHHHHHHHHcCCCeEEee
Q 012335 262 IE-KIFLAQ----KVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 262 ~e-~v~~~q----k~ii~~~~~~gkPvi~AT 287 (466)
.. .-...| +..++.|.+.|+||++=|
T Consensus 104 ~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~ 134 (259)
T 1zzm_A 104 GDDPQFERQQWLLDEQLKLAKRYDLPVILHS 134 (259)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 21 112344 456677999999999765
No 194
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=37.24 E-value=38 Score=34.39 Aligned_cols=93 Identities=16% Similarity=0.166 Sum_probs=57.9
Q ss_pred HHHHHHHHHhCCceEEEecCCCC-H-----HHHHHHHHHHHHHHHHcCCceEEEecCC-CCeeEeeecCCCCcEEecCCC
Q 012335 24 VEMAEKLLRAGMNVARFNFSHGS-H-----AYHQETLDNLRTAMNNTGILCAVMLDTK-GPEIRTGFLKDGKPIQLVQGQ 96 (466)
Q Consensus 24 ~~~l~~li~~G~~v~RiN~shg~-~-----~~~~~~i~~ir~~~~~~~~~i~i~~Dl~-GpkiR~g~~~~~~~i~l~~G~ 96 (466)
...|+.|++.|..|.= +||-. + +....+---.+..++.+|++|...-|.- | +.|++|+
T Consensus 41 lpTI~~ll~~gakvil--~SHlGRP~kG~~~~~~SL~pva~~L~~lLg~~V~f~~d~~~G-------------v~l~~G~ 105 (387)
T 1zmr_A 41 LPTIELALKQGAKVMV--TSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG-------------VDVAEGE 105 (387)
T ss_dssp HHHHHHHHHTTCEEEE--ECCCSSCBTTBCCGGGCSHHHHHHHHHHCSSCEEEESCCTTC-------------CCCCTTC
T ss_pred HHHHHHHHHCCCEEEE--EccCCCCCCCCcCCccCHHHHHHHHHHHhCCCCEECcccccC-------------ccCCCCe
Confidence 4589999999998643 68843 3 2222333334455667899998887876 6 2267777
Q ss_pred EEEEEeCCCCCCCccEEeecchhhhhccCCCCEEEEeCC
Q 012335 97 EITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDG 135 (466)
Q Consensus 97 ~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG 135 (466)
.+.|-.---..++.+ |.+.|.+.+..--.||++|.
T Consensus 106 VlLLEN~RF~~~E~~----nd~~fa~~LA~l~DvyVNDA 140 (387)
T 1zmr_A 106 LVVLENVRFNKGEKK----DDETLSKKYAALCDVFVMDA 140 (387)
T ss_dssp EEEECCGGGSTTTTT----TCHHHHHHHHHTCSEEEECC
T ss_pred EEEEcccCCCcchhc----CCHHHHHHHHhhCCEEEecc
Confidence 777743210122221 55677777766556888884
No 195
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=37.18 E-value=52 Score=33.42 Aligned_cols=65 Identities=20% Similarity=0.254 Sum_probs=40.2
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHhCCceEEEecCCCCH---HHHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 10 KTKIVCTLGPASRSVE----MAEKLLRAGMNVARFNFSHGSH---AYHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 10 ~tkIi~TiGp~~~~~~----~l~~li~~G~~v~RiN~shg~~---~~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
+....+|..... +++ ..+++.+.|.+.+.+.+.||.. ....+-++.+|.+.+..|..+.|++|..
T Consensus 167 ~v~~y~s~~~~~-~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN 238 (412)
T 3stp_A 167 RIPVYYSKLYAG-SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECY 238 (412)
T ss_dssp SEEEEEECCCSC-CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred eEEEEEEecCCC-CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 456677753322 444 4455777899999999999731 2334455555555555665566777654
No 196
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=37.07 E-value=72 Score=31.20 Aligned_cols=83 Identities=13% Similarity=0.222 Sum_probs=50.5
Q ss_pred HHHHHHHHHhcCCCceEEEeecCH------HHHhcHHHHHhc-CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCC
Q 012335 210 LVEVRNLLRVHAKNILLMSKVENL------EGVANFDDVLAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKP 282 (466)
Q Consensus 210 v~~~r~~l~~~~~~~~IiaKIE~~------~av~nideI~~~-sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkP 282 (466)
+..++..... +.+..|+|+.|.. +++++.....++ +|+|++- ... . -..+-+.|.+...|
T Consensus 147 ~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e-------~~~-~----~~~~~~i~~~~~~P 213 (305)
T 3ih1_A 147 VQKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPE-------ALQ-S----EEEFRLFNSKVNAP 213 (305)
T ss_dssp HHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEET-------TCC-S----HHHHHHHHHHSCSC
T ss_pred HHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEc-------CCC-C----HHHHHHHHHHcCCC
Confidence 3344443333 5678999999986 555666666665 8999983 221 1 13344556677889
Q ss_pred eEEeehhhHhhhcCCCCCHHHHHhHH
Q 012335 283 VVTATQMLESMIKSPRPTRAEATDVA 308 (466)
Q Consensus 283 vi~ATqmLeSM~~~p~PTRAEvsDv~ 308 (466)
++. .|++. -..|.+|.+|..+..
T Consensus 214 ~~~--n~~~~-g~tp~~~~~eL~~lG 236 (305)
T 3ih1_A 214 LLA--NMTEF-GKTPYYSAEEFANMG 236 (305)
T ss_dssp BEE--ECCTT-SSSCCCCHHHHHHTT
T ss_pred EEE--eecCC-CCCCCCCHHHHHHcC
Confidence 863 34432 234677888877654
No 197
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=36.92 E-value=1e+02 Score=30.65 Aligned_cols=68 Identities=12% Similarity=0.192 Sum_probs=51.3
Q ss_pred hhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 207 GSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 207 a~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
.+.+..++++..+. .+.+++-+-++..++-+.+. .|.+-||-+++- +..+++.+.+.||||++.
T Consensus 156 ~egl~~l~~~~~e~--Gl~~~te~~d~~~~~~l~~~---vd~lkIgAr~~~-----------n~~LL~~va~~~kPVilk 219 (350)
T 1vr6_A 156 EKGLEYLREAADKY--GMYVVTEALGEDDLPKVAEY---ADIIQIGARNAQ-----------NFRLLSKAGSYNKPVLLK 219 (350)
T ss_dssp HHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHH---CSEEEECGGGTT-----------CHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHHHh---CCEEEECccccc-----------CHHHHHHHHccCCcEEEc
Confidence 47788888888775 48999999888887666664 799999977663 233455556889999999
Q ss_pred ehhh
Q 012335 287 TQML 290 (466)
Q Consensus 287 TqmL 290 (466)
|.|-
T Consensus 220 ~G~~ 223 (350)
T 1vr6_A 220 RGFM 223 (350)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 8764
No 198
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=36.87 E-value=65 Score=32.18 Aligned_cols=68 Identities=15% Similarity=0.106 Sum_probs=41.1
Q ss_pred hccCcCCCcEEEEcC------------CCChhhHHHHHHH----HHhcCC-CceEEEeecCHHHHhcHHHHHhc----CC
Q 012335 189 NWGVPNKIDMIALSF------------VRKGSDLVEVRNL----LRVHAK-NILLMSKVENLEGVANFDDVLAN----SD 247 (466)
Q Consensus 189 ~~~~~~~~d~v~~sf------------V~sa~dv~~~r~~----l~~~~~-~~~IiaKIE~~~av~nideI~~~----sD 247 (466)
+.+.+.|+|+|.++. +.+.+.+.++++. +.+.+. +++|||- -|+.+-.+|+++ +|
T Consensus 226 ~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~----GGI~~~~dv~kalalGA~ 301 (393)
T 2qr6_A 226 LHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIAD----GSIENSGDVVKAIACGAD 301 (393)
T ss_dssp HHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEEC----SSCCSHHHHHHHHHHTCS
T ss_pred HHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEE----CCCCCHHHHHHHHHcCCC
Confidence 445689999999975 2333444444444 222343 3888882 234444444443 89
Q ss_pred eeEEeCCcccCcC
Q 012335 248 AFMVARGDLGMEI 260 (466)
Q Consensus 248 gImiaRgDLg~e~ 260 (466)
++++||.=|+..-
T Consensus 302 ~V~iG~~~l~~~e 314 (393)
T 2qr6_A 302 AVVLGSPLARAEE 314 (393)
T ss_dssp EEEECGGGGGSTT
T ss_pred EEEECHHHHcCCC
Confidence 9999998766554
No 199
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=36.83 E-value=47 Score=30.84 Aligned_cols=60 Identities=10% Similarity=-0.001 Sum_probs=42.8
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEE
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMV 251 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImi 251 (466)
+.+.+.|+|+|.+.. +..+++.+.-+.+++.|....+...-.| .++.+++++...|.|++
T Consensus 81 ~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~gval~p~t--~~e~l~~~l~~~D~Vl~ 140 (228)
T 3ovp_A 81 KPMAVAGANQYTFHL-EATENPGALIKDIRENGMKVGLAIKPGT--SVEYLAPWANQIDMALV 140 (228)
T ss_dssp HHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEEEEEECTTS--CGGGTGGGGGGCSEEEE
T ss_pred HHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCEEEEEcCCC--CHHHHHHHhccCCeEEE
Confidence 334679999999965 5555677777777777755555443344 46788899988998886
No 200
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=36.70 E-value=79 Score=31.68 Aligned_cols=92 Identities=12% Similarity=0.164 Sum_probs=57.2
Q ss_pred hccCcCCCcEEEEcC-------CCChhhHHHHHHHHHhcCCCceEEEeec---CHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 189 NWGVPNKIDMIALSF-------VRKGSDLVEVRNLLRVHAKNILLMSKVE---NLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 189 ~~~~~~~~d~v~~sf-------V~sa~dv~~~r~~l~~~~~~~~IiaKIE---~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
+|.++.|+|++++.- ....|-.+-++...+..+.+++||+-+= +.++++....-.+. +|++|+-.-.+.
T Consensus 87 ~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY~ 166 (360)
T 4dpp_A 87 NIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYG 166 (360)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 677899999998732 1222333334445555567899999873 45566555554444 799998765443
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
-.+.+.+...-+.|.+. .|+++-
T Consensus 167 -k~sq~gl~~hf~~IA~a-----~PiilY 189 (360)
T 4dpp_A 167 -KTSIEGLIAHFQSVLHM-----GPTIIY 189 (360)
T ss_dssp -CCCHHHHHHHHHTTGGG-----SCEEEE
T ss_pred -CCCHHHHHHHHHHHHHh-----CCEEEE
Confidence 23445666666666542 598864
No 201
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=36.68 E-value=1.4e+02 Score=30.89 Aligned_cols=104 Identities=16% Similarity=0.170 Sum_probs=59.5
Q ss_pred hhcHHHHHhccCcCCCcEEEEcCCC--ChhhHHHHHHHHHhcCCCceEEE-eecCHHHHhcHHHHHhc-CCeeEEeCCcc
Q 012335 181 EKDKEDILNWGVPNKIDMIALSFVR--KGSDLVEVRNLLRVHAKNILLMS-KVENLEGVANFDDVLAN-SDAFMVARGDL 256 (466)
Q Consensus 181 e~D~~di~~~~~~~~~d~v~~sfV~--sa~dv~~~r~~l~~~~~~~~Iia-KIE~~~av~nideI~~~-sDgImiaRgDL 256 (466)
+.+.+.+ +..++.|+|+|.+.... +..-++.++.+- +.-.+..|++ .+-+.+....+ .++ +|+|.++-|.=
T Consensus 230 ~d~~~~a-~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir-~~~p~~~Vi~g~v~t~e~a~~l---~~aGaD~I~Vg~g~G 304 (496)
T 4fxs_A 230 PGNEERV-KALVEAGVDVLLIDSSHGHSEGVLQRIRETR-AAYPHLEIIGGNVATAEGARAL---IEAGVSAVKVGIGPG 304 (496)
T ss_dssp SCCHHHH-HHHHHTTCSEEEEECSCTTSHHHHHHHHHHH-HHCTTCCEEEEEECSHHHHHHH---HHHTCSEEEECSSCC
T ss_pred cchHHHH-HHHHhccCceEEeccccccchHHHHHHHHHH-HHCCCceEEEcccCcHHHHHHH---HHhCCCEEEECCCCC
Confidence 3455566 55678899999885443 222223333332 2223567766 47777665444 333 89999864432
Q ss_pred cCcC-------CchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 257 GMEI-------PIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 257 g~e~-------~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
+... +.+ -..+-.++.+.|++.++|+|.+.-+-
T Consensus 305 s~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIa~GGI~ 344 (496)
T 4fxs_A 305 SICTTRIVTGVGVP-QITAIADAAGVANEYGIPVIADGGIR 344 (496)
T ss_dssp TTBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC
T ss_pred cCcccccccCCCcc-HHHHHHHHHHHhccCCCeEEEeCCCC
Confidence 2211 111 22333567777878899999876544
No 202
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=36.56 E-value=61 Score=30.62 Aligned_cols=96 Identities=10% Similarity=0.149 Sum_probs=58.6
Q ss_pred cHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEee--------cCHHHHhcHHHHHhcCCeeEEeCC
Q 012335 183 DKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKV--------ENLEGVANFDDVLANSDAFMVARG 254 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKI--------E~~~av~nideI~~~sDgImiaRg 254 (466)
|.+.+.+.+.+.|++.+++ -.+.++...+.++.... ..|++-+ +..+-++.+.+.+.. . +|=|
T Consensus 15 d~~~vl~~a~~~gV~~i~v--~~~~~~~~~~~~la~~~---~~v~~~~GiHP~~~~~~~~~l~~l~~~~~~--~--vaIG 85 (254)
T 3gg7_A 15 DPVAVARACEERQLTVLSV--TTTPAAWRGTLALAAGR---PHVWTALGFHPEVVSERAADLPWFDRYLPE--T--RFVG 85 (254)
T ss_dssp SHHHHHHHHHHTTCEEEEC--CSSGGGHHHHHGGGTTC---TTEEECBCCCGGGTTTTGGGTHHHHHHGGG--C--SEEE
T ss_pred CHHHHHHHHHHCCCcEEEe--cCCHHHHHHHHHHHHhC---CCeEEEEeeCcccccccHHHHHHHHHHhhh--c--cEEE
Confidence 5555547788899998776 35777777776655432 2344333 222334444444432 2 4557
Q ss_pred cccCcCCch--hHHHHHH----HHHHHHHHcCCCeE-Eee
Q 012335 255 DLGMEIPIE--KIFLAQK----VMIHKANIQGKPVV-TAT 287 (466)
Q Consensus 255 DLg~e~~~e--~v~~~qk----~ii~~~~~~gkPvi-~AT 287 (466)
.-|.+.-.. .-...|+ +.++.|++.++||+ +=|
T Consensus 86 EiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~ 125 (254)
T 3gg7_A 86 EVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHS 125 (254)
T ss_dssp EEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 777777543 3345664 66788999999999 765
No 203
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=36.52 E-value=1.7e+02 Score=26.66 Aligned_cols=97 Identities=12% Similarity=0.015 Sum_probs=53.0
Q ss_pred HHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeE--EeC-CcccCcCCc
Q 012335 186 DILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFM--VAR-GDLGMEIPI 262 (466)
Q Consensus 186 di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgIm--iaR-gDLg~e~~~ 262 (466)
.+ +.+.+.|+|+|.++.. ..++...+.+.+++.|.. ++.-+......+.+..+...+|+++ +.+ |-.|..-+.
T Consensus 100 ~~-~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g~~--~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~ 175 (248)
T 1geq_A 100 FL-AEAKASGVDGILVVDL-PVFHAKEFTEIAREEGIK--TVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREEI 175 (248)
T ss_dssp HH-HHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHTCE--EEEEECTTCCHHHHHHHHHHCSSEEEEECCC-------CC
T ss_pred HH-HHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhCCC--eEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCCC
Confidence 45 5567899999999754 457788888888877643 3444433234455677777788543 232 222322111
Q ss_pred hhHHHHHHHHHHHHHHcCCCeEEeeh
Q 012335 263 EKIFLAQKVMIHKANIQGKPVVTATQ 288 (466)
Q Consensus 263 e~v~~~qk~ii~~~~~~gkPvi~ATq 288 (466)
-+...+.+-+.+...+.|+++..-
T Consensus 176 --~~~~~~~i~~l~~~~~~pi~~~GG 199 (248)
T 1geq_A 176 --PKTAYDLLRRAKRICRNKVAVGFG 199 (248)
T ss_dssp --CHHHHHHHHHHHHHCSSCEEEESC
T ss_pred --ChhHHHHHHHHHhhcCCCEEEEee
Confidence 122222222233334789887664
No 204
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=36.47 E-value=29 Score=34.83 Aligned_cols=46 Identities=26% Similarity=0.386 Sum_probs=35.4
Q ss_pred EecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Q 012335 15 CTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTA 60 (466)
Q Consensus 15 ~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~ 60 (466)
+.+|-.....+.++.++++|++++=++.+||..+...+.++.+|+.
T Consensus 93 ~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 93 VSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp EEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 3445444457889999999999999999999877666677777763
No 205
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=36.35 E-value=1.6e+02 Score=28.53 Aligned_cols=88 Identities=16% Similarity=0.143 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHhcCC----cEEEEEcCCchHHHHHHhc--CCCCCEEEEEeccccccccccccCChhhhhhhcCccCc
Q 012335 335 LESLASSAVRTANCIKA----ALILVLTRGGTTAKMVSKY--RPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRAL 408 (466)
Q Consensus 335 ~~~ia~~av~~a~~~~a----~~Ivv~T~sG~ta~~vSk~--RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV 408 (466)
-+.-+...+..|.+.+. +.||+.| ||++++.+|.+ +-.+|.+.+ +|+ + .++...+++ -.+|-
T Consensus 53 K~R~a~~~l~~a~~~g~l~~~~~vv~aS-sGN~g~alA~aa~~~G~~~~iv-~p~---~------~~~~k~~~~-~~~GA 120 (325)
T 3dwg_A 53 KDRPAVRMIEQAEADGLLRPGATILEPT-SGNTGISLAMAARLKGYRLICV-MPE---N------TSVERRQLL-ELYGA 120 (325)
T ss_dssp THHHHHHHHHHHHHTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEE-EES---S------SCHHHHHHH-HHHTC
T ss_pred HHHHHHHHHHHHHHcCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEE-ECC---C------CCHHHHHHH-HHCCC
Confidence 34455666666666665 6666654 79988765543 346777766 453 1 112222222 24566
Q ss_pred EEEEcCCCCCCCCccCHHHHHHHHHHHHHHcC
Q 012335 409 VPVLSSGSARASDEESTEETIEFALQHAKAKG 440 (466)
Q Consensus 409 ~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G 440 (466)
.-++++.. .+.++..+.+.+.+++.|
T Consensus 121 ~V~~~~~~------~~~~~~~~~a~~l~~~~~ 146 (325)
T 3dwg_A 121 QIIFSAAE------GGSNTAVATAKELAATNP 146 (325)
T ss_dssp EEEEECST------TTHHHHHHHHHHHHHHCT
T ss_pred EEEEECCC------CCHHHHHHHHHHHHHhCC
Confidence 55555432 234444555555555544
No 206
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=36.28 E-value=73 Score=24.66 Aligned_cols=72 Identities=17% Similarity=0.220 Sum_probs=39.3
Q ss_pred CcEEecCCCEEEEEeCCCCCCCccEEe-ecchhhhhccCCCC--EEEEeCCeEEEEEEEEec-CCCeEEEEEeeC-eEe
Q 012335 88 KPIQLVQGQEITISTDYSLKGDEKMIS-MSYKKLAEDLRPGS--VILCSDGTISLTVLDCAK-ELGLVRCRCENS-AVL 161 (466)
Q Consensus 88 ~~i~l~~G~~v~l~~~~~~~~~~~~i~-v~~~~~~~~v~~Gd--~i~iddG~i~l~V~~v~~-~~~~i~~~v~~g-G~l 161 (466)
..+.+.+|+.++|.....-.-..+.-| -|-..+... .+. .+.-+++.-.|.+..+.. +.....|.+.|. |..
T Consensus 13 ~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~--~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 89 (100)
T 3knb_A 13 SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQ--EQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSD 89 (100)
T ss_dssp SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTT--GGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeee--ccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEE
Confidence 458899999999987621011122222 332222111 111 234456667788766644 345688999875 443
No 207
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=35.84 E-value=1.2e+02 Score=30.38 Aligned_cols=45 Identities=18% Similarity=0.229 Sum_probs=32.1
Q ss_pred CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh
Q 012335 246 SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 310 (466)
Q Consensus 246 sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na 310 (466)
.|.+=||-+|+- .+| +++.+.+.|||||+.|-|= |-+|+-..++.
T Consensus 112 v~~~KI~S~~~~------N~p-----LL~~va~~gKPviLstGms---------tl~Ei~~Ave~ 156 (350)
T 3g8r_A 112 IEIIKIASCSFT------DWP-----LLERIARSDKPVVASTAGA---------RREDIDKVVSF 156 (350)
T ss_dssp CCEEEECSSSTT------CHH-----HHHHHHTSCSCEEEECTTC---------CHHHHHHHHHH
T ss_pred CCEEEECccccc------CHH-----HHHHHHhhCCcEEEECCCC---------CHHHHHHHHHH
Confidence 789999988884 233 4556667899999999862 56666655554
No 208
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=35.81 E-value=30 Score=31.88 Aligned_cols=68 Identities=9% Similarity=0.082 Sum_probs=42.9
Q ss_pred cHHHHHhccCcCCCcEEEE-----cCCCChhhHHHHHHHHHhcCCCceEEEe--ecCHHHHhcHHHHHhc-CCeeEEeCC
Q 012335 183 DKEDILNWGVPNKIDMIAL-----SFVRKGSDLVEVRNLLRVHAKNILLMSK--VENLEGVANFDDVLAN-SDAFMVARG 254 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~-----sfV~sa~dv~~~r~~l~~~~~~~~IiaK--IE~~~av~nideI~~~-sDgImiaRg 254 (466)
|...+.+...+.|+|++.+ .|+..... ..++++.... ++++++. |.+++ .+++.+++ +|+|++++.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg~~ 106 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAM--DIKVELSGGIRDDD---TLAAALATGCTRVNLGTA 106 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhc--CCcEEEECCcCCHH---HHHHHHHcCCCEEEECch
Confidence 3333335567899999987 35555555 5555544432 5677764 66654 35566655 899999876
Q ss_pred cc
Q 012335 255 DL 256 (466)
Q Consensus 255 DL 256 (466)
.|
T Consensus 107 ~l 108 (244)
T 1vzw_A 107 AL 108 (244)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 209
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=35.69 E-value=1.1e+02 Score=30.24 Aligned_cols=98 Identities=11% Similarity=0.067 Sum_probs=64.3
Q ss_pred CChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc--CCeeEEeCCcc
Q 012335 179 LTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN--SDAFMVARGDL 256 (466)
Q Consensus 179 lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~--sDgImiaRgDL 256 (466)
++..+...+.+...+.|+ +|=-|+- |+..++++-.. -.++|++ =|+....+.+.++++. +|.|++..+-.
T Consensus 200 ~~~~~a~~~~~~l~~~~i-~iE~P~~----~~~~~~~l~~~--~~iPI~~-de~i~~~~~~~~~i~~~~~d~v~ik~~~~ 271 (379)
T 2rdx_A 200 WRVDNAIRLARATRDLDY-ILEQPCR----SYEECQQVRRV--ADQPMKL-DECVTGLHMAQRIVADRGAEICCLKISNL 271 (379)
T ss_dssp SCHHHHHHHHHHTTTSCC-EEECCSS----SHHHHHHHHTT--CCSCEEE-CTTCCSHHHHHHHHHHTCCSEEEEETTTT
T ss_pred CCHHHHHHHHHHHHhCCe-EEeCCcC----CHHHHHHHHhh--CCCCEEE-eCCcCCHHHHHHHHHcCCCCEEEEecccc
Confidence 344554344355566889 9887764 55555543322 2466655 4776667778888664 79999987776
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHh
Q 012335 257 GMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLES 292 (466)
Q Consensus 257 g~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeS 292 (466)
|- ..--.+++..|+++|.++.+.+ |+||
T Consensus 272 GG-------it~~~~i~~~A~~~g~~~~~~~-~~es 299 (379)
T 2rdx_A 272 GG-------LSKARRTRDFLIDNRMPVVAED-SWGG 299 (379)
T ss_dssp TS-------HHHHHHHHHHHHHTTCCEEEEC-SBCS
T ss_pred CC-------HHHHHHHHHHHHHcCCeEEEee-ccCc
Confidence 53 1233578999999999988754 5554
No 210
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=35.65 E-value=1.5e+02 Score=27.17 Aligned_cols=117 Identities=10% Similarity=0.046 Sum_probs=67.9
Q ss_pred hccCcCCCcEEEEcCC-------CChhhHHHHHHHHHhcCCCceEEEee-------cCHHHHhcHHHHHhc-----CCee
Q 012335 189 NWGVPNKIDMIALSFV-------RKGSDLVEVRNLLRVHAKNILLMSKV-------ENLEGVANFDDVLAN-----SDAF 249 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV-------~sa~dv~~~r~~l~~~~~~~~IiaKI-------E~~~av~nideI~~~-----sDgI 249 (466)
+.+.+.|+|+|-+... .+.+++.++++.+.+.|-.+..++-- ...+.++.+...++. ++.|
T Consensus 22 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v 101 (286)
T 3dx5_A 22 QFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKI 101 (286)
T ss_dssp HHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEE
Confidence 6788999999988432 23578888999998877544433211 013345555555554 3566
Q ss_pred EEeCCcccCcCC----chhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh
Q 012335 250 MVARGDLGMEIP----IEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 310 (466)
Q Consensus 250 miaRgDLg~e~~----~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na 310 (466)
.+..|...-... .+.+...-+++...|.++|..+.+ |-+-.+...|-+++.++...
T Consensus 102 ~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----E~~~~~~~~~~~~~~~l~~~ 161 (286)
T 3dx5_A 102 RTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLL-----ETHPNTLTDTLPSTLELLGE 161 (286)
T ss_dssp EECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEE-----ECCTTSTTSSHHHHHHHHHH
T ss_pred EEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEE-----ecCCCcCcCCHHHHHHHHHh
Confidence 665554432211 234445556777777777876554 32333444566666655555
No 211
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=35.63 E-value=1.3e+02 Score=27.27 Aligned_cols=90 Identities=12% Similarity=0.077 Sum_probs=53.8
Q ss_pred HHHHHhccCcCCCcEEEEc-----CCCC----hhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-CCeeEEeC
Q 012335 184 KEDILNWGVPNKIDMIALS-----FVRK----GSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-SDAFMVAR 253 (466)
Q Consensus 184 ~~di~~~~~~~~~d~v~~s-----fV~s----a~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-sDgImiaR 253 (466)
.+++ +.+.+.|+|+|-+- |+.+ .+.++++++.+ +....+-.++..++ +.++...++ +|+|.+.-
T Consensus 26 ~~~i-~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~---~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh~ 99 (230)
T 1rpx_A 26 GEQV-KAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT---DLPLDVHLMIVEPD--QRVPDFIKAGADIVSVHC 99 (230)
T ss_dssp HHHH-HHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC---CSCEEEEEESSSHH--HHHHHHHHTTCSEEEEEC
T ss_pred HHHH-HHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEEEe
Confidence 3455 66778899988884 5554 23344443322 33455667787743 346666555 79998862
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 254 GDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 254 gDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
.... .+.. .+.++.++++|+.++++.
T Consensus 100 ~~~~----~~~~----~~~~~~~~~~g~~ig~~~ 125 (230)
T 1rpx_A 100 EQSS----TIHL----HRTINQIKSLGAKAGVVL 125 (230)
T ss_dssp STTT----CSCH----HHHHHHHHHTTSEEEEEE
T ss_pred cCcc----chhH----HHHHHHHHHcCCcEEEEe
Confidence 1001 1221 366777888899988874
No 212
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=35.59 E-value=25 Score=34.21 Aligned_cols=64 Identities=16% Similarity=0.147 Sum_probs=46.1
Q ss_pred HHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHH--HhcHHHHHhc-CCeeEEeC
Q 012335 184 KEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEG--VANFDDVLAN-SDAFMVAR 253 (466)
Q Consensus 184 ~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~a--v~nideI~~~-sDgImiaR 253 (466)
.+.+ +-+++.|+|+|.+.- -++++++++.+.+...+.++++.| --| .+|+.++.+. .|+|-++.
T Consensus 203 leea-~eA~~aGaD~I~LDn-~~~e~l~~av~~l~~~~~~v~ieA----SGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 203 LEDA-LRAVEAGADIVMLDN-LSPEEVKDISRRIKDINPNVIVEV----SGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp HHHH-HHHHHTTCSEEEEES-CCHHHHHHHHHHHHHHCTTSEEEE----EECCCTTTGGGGCCTTCCEEEEGG
T ss_pred HHHH-HHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEeH
Confidence 4455 456789999999988 578899988888865444554443 223 3677887777 79999985
No 213
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=35.58 E-value=28 Score=34.85 Aligned_cols=67 Identities=15% Similarity=0.202 Sum_probs=37.9
Q ss_pred HHHHhccCcCCCcEEEEcCCCC------hhhHHHHHHHHHhcCCCceEEE--eecCHHHHhcHHHHHhcCCeeEEeCC
Q 012335 185 EDILNWGVPNKIDMIALSFVRK------GSDLVEVRNLLRVHAKNILLMS--KVENLEGVANFDDVLANSDAFMVARG 254 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV~s------a~dv~~~r~~l~~~~~~~~Iia--KIE~~~av~nideI~~~sDgImiaRg 254 (466)
+++ +.+.+.|+|+|.+|---. ..++..++++....+.++.||+ -|-+.+-+ .+.+..=+|+++|||.
T Consensus 237 e~a-~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~--~k~l~~GAdaV~iGr~ 311 (370)
T 1gox_A 237 EDA-RLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDV--FKALALGAAGVFIGRP 311 (370)
T ss_dssp HHH-HHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHH--HHHHHHTCSEEEECHH
T ss_pred HHH-HHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHH--HHHHHcCCCEEeecHH
Confidence 345 556789999999964211 1344445544444444677777 34443222 1122222899999983
No 214
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=35.39 E-value=28 Score=35.24 Aligned_cols=85 Identities=15% Similarity=0.213 Sum_probs=56.7
Q ss_pred hcHHHHHhccCcC-CCcEEEEcC-------CCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeC
Q 012335 182 KDKEDILNWGVPN-KIDMIALSF-------VRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVAR 253 (466)
Q Consensus 182 ~D~~di~~~~~~~-~~d~v~~sf-------V~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaR 253 (466)
.|...| +.+.+. |+++|-++- +-+.+++.++++.+.+.|-.+.. +|+ +.--++|.. +.
T Consensus 31 ~d~~~L-~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~---i~s---~~~~~~i~~-------~~ 96 (386)
T 3bdk_A 31 KDPVTL-EEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITV---IES---IPVHEDIKQ-------GK 96 (386)
T ss_dssp TCSSCH-HHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEE---EEC---CCCCHHHHT-------TC
T ss_pred CCHHHH-HHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEE---Eec---ccccccccc-------Cc
Confidence 444455 566789 999998772 55678999999999987643322 343 111122221 11
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 254 GDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 254 gDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
. ..++.-...++.|+.|.+.|.|+++-
T Consensus 97 ~------~r~~~ie~~k~~i~~aa~lGi~~v~~ 123 (386)
T 3bdk_A 97 P------NRDALIENYKTSIRNVGAAGIPVVCY 123 (386)
T ss_dssp T------THHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred H------HHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 1 15667777899999999999999875
No 215
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=35.33 E-value=34 Score=34.30 Aligned_cols=65 Identities=15% Similarity=0.153 Sum_probs=38.9
Q ss_pred HHHHhccCcCCCcEEEEcCC------CChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc----CCeeEEeCC
Q 012335 185 EDILNWGVPNKIDMIALSFV------RKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN----SDAFMVARG 254 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV------~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~----sDgImiaRg 254 (466)
++. +.+.+.|+|+|.+|-- ....++..+.++....+.++.||+- -|+.+-.+++++ +|++||||.
T Consensus 241 e~a-~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~----GGI~~g~D~~kalalGAd~V~iGr~ 315 (368)
T 2nli_A 241 EDA-DMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFD----SGVRRGEHVAKALASGADVVALGRP 315 (368)
T ss_dssp HHH-HHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEEC----SSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHH-HHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHH
Confidence 344 4567899999999631 1122344444443333446778773 355555555554 899999983
No 216
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=35.23 E-value=51 Score=31.64 Aligned_cols=57 Identities=14% Similarity=0.111 Sum_probs=42.9
Q ss_pred ceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 224 ILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 224 ~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
.++++. +.+-+.|+++.+|++.|+.|=|. ++........++.++++++|+++---++
T Consensus 42 sP~M~~-----~~~e~~e~~~~a~alvIn~G~l~-----~~~~~~~~~a~~~a~~~~~PvVlDPVg~ 98 (273)
T 3dzv_A 42 KPIMAD-----DPREFPQMFQQTSALVLNLGHLS-----QEREQSLLAASDYARQVNKLTVVDLVGY 98 (273)
T ss_dssp EEECCC-----CGGGHHHHHTTCSEEEEECCSCC-----HHHHHHHHHHHHHHHHTTCCEEEECTTT
T ss_pred chhhcC-----CHHHHHHHHHHCCeEEEecCCCC-----hHHHHHHHHHHHHHHHcCCcEEEchhhc
Confidence 466663 35678899999999999988753 3444566777788999999999876555
No 217
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=35.14 E-value=51 Score=31.67 Aligned_cols=66 Identities=15% Similarity=0.322 Sum_probs=40.8
Q ss_pred cHHHHHhccCcCCCcEEEEcCCC---ChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHH---hc-CCeeEEeC
Q 012335 183 DKEDILNWGVPNKIDMIALSFVR---KGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVL---AN-SDAFMVAR 253 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~sfV~---sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~---~~-sDgImiaR 253 (466)
+.+++ +.+++.|+|+|.+.-.. ..-|+....+++.....++.+|| |+ |+.+.+++. ++ +||++||.
T Consensus 178 ~~eEl-~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~vIa--es--GI~t~edv~~l~~~Ga~gvLVG~ 250 (272)
T 3tsm_A 178 DEAEM-ERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVG--ES--GIFTHEDCLRLEKSGIGTFLIGE 250 (272)
T ss_dssp SHHHH-HHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCTTSEEEE--ES--SCCSHHHHHHHHTTTCCEEEECH
T ss_pred CHHHH-HHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCCCCcEEE--EC--CCCCHHHHHHHHHcCCCEEEEcH
Confidence 45566 67788999999887322 12256666666655444566666 32 554444444 33 79999984
No 218
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=34.98 E-value=83 Score=30.76 Aligned_cols=91 Identities=12% Similarity=0.173 Sum_probs=53.7
Q ss_pred hccCcCCCcEEEEcCCCCh---------------hhHHHHHHHH----HhcCCCceEEEeecCHHHHhcHH----HHHhc
Q 012335 189 NWGVPNKIDMIALSFVRKG---------------SDLVEVRNLL----RVHAKNILLMSKVENLEGVANFD----DVLAN 245 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa---------------~dv~~~r~~l----~~~~~~~~IiaKIE~~~av~nid----eI~~~ 245 (466)
+.+++.|+|+|.+=-|.+- ++...+-..| ...+.+..|+.| .|.+-++ ++...
T Consensus 129 ~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~~~ 204 (309)
T 2aam_A 129 DRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLAST 204 (309)
T ss_dssp HHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHHHH
T ss_pred HHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHHhh
Confidence 4567899999999877543 2322222223 555666777765 3555566 77778
Q ss_pred CCeeEEeCCcccC----cCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 246 SDAFMVARGDLGM----EIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 246 sDgImiaRgDLg~----e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
.||++.= ++-. +.+. +-......-+..++++||||+..
T Consensus 205 id~v~~E--s~~~~~~~~~~~-~e~~~~~~~l~~~~~~GkpV~~i 246 (309)
T 2aam_A 205 VSGWAVE--NLFYLKTIPLEE-NETKSRLEYLIRLNRKGKFILSV 246 (309)
T ss_dssp CSEEEEE--SSSEETTEECCH-HHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCEEEee--eEEecCCCCCCH-HHHHHHHHHHHHHHHcCCcEEEE
Confidence 8888763 1211 1111 22222334556777889999963
No 219
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=34.95 E-value=57 Score=29.91 Aligned_cols=88 Identities=11% Similarity=0.081 Sum_probs=53.8
Q ss_pred HHHHhccCcCCCcEEEEc-----CCCC----hhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-CCeeEEeCC
Q 012335 185 EDILNWGVPNKIDMIALS-----FVRK----GSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-SDAFMVARG 254 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~s-----fV~s----a~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-sDgImiaRg 254 (466)
+++ +.+.+.|+|++-+- |+.. .+.++++|+.+ .....+=-++.+++ +.++..+++ +|+|.+--+
T Consensus 23 ~~i-~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~---~~~~~v~lmv~d~~--~~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 23 AEA-DRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT---KAYLDCHLMVTNPS--DYVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp HHH-HHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSCGG--GGHHHHHHHTCSEEEEEGG
T ss_pred HHH-HHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEECCC
Confidence 455 56678899998766 7766 45555555433 11223336677763 347777776 799977522
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 255 DLGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 255 DLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
. .+ . .-.+.++.+++.|++++++.
T Consensus 97 ~--~~----~---~~~~~~~~i~~~g~~igv~~ 120 (228)
T 1h1y_A 97 V--SR----D---NWQELIQSIKAKGMRPGVSL 120 (228)
T ss_dssp G--CT----T---THHHHHHHHHHTTCEEEEEE
T ss_pred C--cc----c---HHHHHHHHHHHcCCCEEEEE
Confidence 1 11 1 11366777888999999865
No 220
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=34.80 E-value=2.3e+02 Score=29.15 Aligned_cols=100 Identities=16% Similarity=0.099 Sum_probs=56.4
Q ss_pred cHHHHHhccCcCCCcEEEE--cCCCCh---hhHHHHHHHHHhcCCCceEEEe-ecCHHHHhcHHHHHhcCCeeEEeCCcc
Q 012335 183 DKEDILNWGVPNKIDMIAL--SFVRKG---SDLVEVRNLLRVHAKNILLMSK-VENLEGVANFDDVLANSDAFMVARGDL 256 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~--sfV~sa---~dv~~~r~~l~~~~~~~~IiaK-IE~~~av~nideI~~~sDgImiaRgDL 256 (466)
..+.+ +.+++.|+|+|.+ ++-... +.++.+++.+ .++.|+++ +.+.+....+.+. =+|+|.++.|-=
T Consensus 256 ~~~~a-~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~----~~~pvi~~~v~t~~~a~~l~~a--Gad~I~vg~~~G 328 (514)
T 1jcn_A 256 DKYRL-DLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY----PHLQVIGGNVVTAAQAKNLIDA--GVDGLRVGMGCG 328 (514)
T ss_dssp HHHHH-HHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC----TTCEEEEEEECSHHHHHHHHHH--TCSEEEECSSCS
T ss_pred hHHHH-HHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC----CCCceEecccchHHHHHHHHHc--CCCEEEECCCCC
Confidence 45555 5678899999998 432221 2333344332 35788885 8777665444332 289999964210
Q ss_pred cCc-------CCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 257 GME-------IPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 257 g~e-------~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
+.. .+.+ .+.....+-+.+.+.+.|+|.+.-+-
T Consensus 329 ~~~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~GGI~ 368 (514)
T 1jcn_A 329 SICITQEVMACGRP-QGTAVYKVAEYARRFGVPIIADGGIQ 368 (514)
T ss_dssp CCBTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC
T ss_pred cccccccccCCCcc-chhHHHHHHHHHhhCCCCEEEECCCC
Confidence 110 1211 12333445555666799999876544
No 221
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=34.78 E-value=1.8e+02 Score=28.53 Aligned_cols=57 Identities=12% Similarity=0.186 Sum_probs=36.3
Q ss_pred hccCcCCCcEEEEcCCCC-hhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEE-eC
Q 012335 189 NWGVPNKIDMIALSFVRK-GSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMV-AR 253 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~s-a~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImi-aR 253 (466)
+.+.+.|+|+|.++|=.. .+.++.+++ . +++++.++-+.+-...+.+ .-+|+|.+ ++
T Consensus 116 ~~~~~~g~~~V~~~~g~~~~~~i~~~~~----~--g~~v~~~v~t~~~a~~a~~--~GaD~i~v~g~ 174 (369)
T 3bw2_A 116 AVLLDDPVPVVSFHFGVPDREVIARLRR----A--GTLTLVTATTPEEARAVEA--AGADAVIAQGV 174 (369)
T ss_dssp HHHHHSCCSEEEEESSCCCHHHHHHHHH----T--TCEEEEEESSHHHHHHHHH--TTCSEEEEECT
T ss_pred HHHHhcCCCEEEEeCCCCcHHHHHHHHH----C--CCeEEEECCCHHHHHHHHH--cCCCEEEEeCC
Confidence 566889999999987543 344544443 2 4688888877653322221 22799999 54
No 222
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=34.74 E-value=1.2e+02 Score=29.38 Aligned_cols=107 Identities=11% Similarity=0.121 Sum_probs=68.0
Q ss_pred HHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEee-c-CHHHHhcHHHHHhc-CCeeEEeCCcccCcC
Q 012335 184 KEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKV-E-NLEGVANFDDVLAN-SDAFMVARGDLGMEI 260 (466)
Q Consensus 184 ~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKI-E-~~~av~nideI~~~-sDgImiaRgDLg~e~ 260 (466)
+++. +...+.|+|.|++.-+.+.+++.++.+.+. +++++.+ | .....-+.+++-+. .+.|++++.=+-
T Consensus 170 i~ra-~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-----iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~--- 240 (295)
T 1xg4_A 170 IERA-QAYVEAGAEMLFPEAITELAMYRQFADAVQ-----VPILANITEFGATPLFTTDELRSAHVAMALYPLSAFR--- 240 (295)
T ss_dssp HHHH-HHHHHTTCSEEEETTCCSHHHHHHHHHHHC-----SCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHH---
T ss_pred HHHH-HHHHHcCCCEEEEeCCCCHHHHHHHHHHcC-----CCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHH---
Confidence 4444 345789999999999988888888888773 5666644 3 13345577888776 688888754331
Q ss_pred CchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHhh
Q 012335 261 PIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAA 311 (466)
Q Consensus 261 ~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naa 311 (466)
-.....++....-++.|.. ..+.+.| +|++|+.++....
T Consensus 241 ---aa~~a~~~~~~~i~~~g~~----~~~~~~~-----~~~~e~~~l~~~~ 279 (295)
T 1xg4_A 241 ---AMNRAAEHVYNVLRQEGTQ----KSVIDTM-----QTRNELYESINYY 279 (295)
T ss_dssp ---HHHHHHHHHHHHHHHHSSS----GGGGGGS-----CCHHHHHHHTTHH
T ss_pred ---HHHHHHHHHHHHHHHhCCc----ccccccC-----CCHHHHHHHcCHH
Confidence 2222333445555556654 2233443 6899998886653
No 223
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=34.64 E-value=35 Score=27.72 Aligned_cols=37 Identities=16% Similarity=0.303 Sum_probs=27.4
Q ss_pred HHHHHHHHhcCCcEEEEEcCC--------chHHHHHHhcCCCCCEEEE
Q 012335 340 SSAVRTANCIKAALILVLTRG--------GTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 340 ~~av~~a~~~~a~~Ivv~T~s--------G~ta~~vSk~RP~~PIiAv 379 (466)
...++.|. ++++||+-++. |+++..+.+.-| |||+.+
T Consensus 93 ~~I~~~a~--~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 137 (138)
T 3idf_A 93 EMVLEEAK--DYNLLIIGSSENSFLNKIFASHQDDFIQKAP-IPVLIV 137 (138)
T ss_dssp HHHHHHHT--TCSEEEEECCTTSTTSSCCCCTTCHHHHHCS-SCEEEE
T ss_pred HHHHHHHh--cCCEEEEeCCCcchHHHHhCcHHHHHHhcCC-CCEEEe
Confidence 34444555 99999988763 777888877766 999987
No 224
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=34.55 E-value=49 Score=33.07 Aligned_cols=62 Identities=15% Similarity=0.119 Sum_probs=39.8
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 10 KTKIVCTLGPASRSVE----MAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 10 ~tkIi~TiGp~~~~~~----~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
+....+|+|....+++ ..+++.++|.+.+.|+..|++.+.-.+.++.+|+ ..|..+.|++|.
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~---a~G~~~~l~vDa 197 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKT---CVPAGSKVMIDP 197 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHT---TSCTTCEEEEEC
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHH---hhCCCCeEEEEC
Confidence 4556667654222443 3456788999999999999888765566666664 344444555555
No 225
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=34.52 E-value=1.4e+02 Score=27.62 Aligned_cols=102 Identities=18% Similarity=0.157 Sum_probs=59.0
Q ss_pred hcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeec-------CHHHHhcHHHHHhcCCeeEEeCC
Q 012335 182 KDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVE-------NLEGVANFDDVLANSDAFMVARG 254 (466)
Q Consensus 182 ~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE-------~~~av~nideI~~~sDgImiaRg 254 (466)
.|.+++.+.+.+.|++.+.++-. +.++-..+.++....+ ++....-+- +.++++.+++.+. +.-.+|-|
T Consensus 27 ~~~~~~l~~~~~~GV~~~v~~~~-~~~~~~~~~~l~~~~p-~i~~~~G~hP~~~~~~~~~~~~~l~~~~~--~~~~~~iG 102 (268)
T 1j6o_A 27 DDRNAVISSFEENNIEFVVNVGV-NLEDSKKSLDLSKTSD-RIFCSVGVHPHDAKEVPEDFIEHLEKFAK--DEKVVAIG 102 (268)
T ss_dssp TTHHHHHHTTTTTTEEEEEEECS-SHHHHHHHHHHHTTCT-TEEEEECCCGGGGGGCCTTHHHHHHHHTT--STTEEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEeeccccccccCHHHHHHHHHHhc--cCCEEEEE
Confidence 35555547778899998776543 5677777777665432 333223231 0123444444443 22344556
Q ss_pred cccCcCCch-hHHHHH----HHHHHHHHHcCCCeEEee
Q 012335 255 DLGMEIPIE-KIFLAQ----KVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 255 DLg~e~~~e-~v~~~q----k~ii~~~~~~gkPvi~AT 287 (466)
..|+..... .-...| ..+++.|.+.|+||++=|
T Consensus 103 e~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~ 140 (268)
T 1j6o_A 103 ETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHI 140 (268)
T ss_dssp EEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 667665431 112344 577889999999999865
No 226
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=34.36 E-value=2e+02 Score=28.06 Aligned_cols=126 Identities=13% Similarity=0.090 Sum_probs=77.8
Q ss_pred CChhcHHHHHhccCcCCCcEEEEcC-CCChhhHHHHHHHHHhcCCCceEEEee-cCHHHHhcHHHHHhcC--C--eeEEe
Q 012335 179 LTEKDKEDILNWGVPNKIDMIALSF-VRKGSDLVEVRNLLRVHAKNILLMSKV-ENLEGVANFDDVLANS--D--AFMVA 252 (466)
Q Consensus 179 lte~D~~di~~~~~~~~~d~v~~sf-V~sa~dv~~~r~~l~~~~~~~~IiaKI-E~~~av~nideI~~~s--D--gImia 252 (466)
++..|+..|.+...+.|+|.|=+.| +-+++|.+.++.+... ..+.++.+-. =+.++++..-+-+.-+ | .++++
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s 103 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKA-VTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIG 103 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHH-CCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHh-CCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEec
Confidence 4556666665666779999998855 5578888888776554 3566776654 3455554332222222 3 24555
Q ss_pred CCcccC----cCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHhh
Q 012335 253 RGDLGM----EIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAA 311 (466)
Q Consensus 253 RgDLg~----e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naa 311 (466)
-.|+-. ....++.....+.+++.|+++|+.|.+..+ -+ .+-+...+.+++.++
T Consensus 104 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~-d~-----~~~~~~~~~~~~~~~ 160 (325)
T 3eeg_A 104 SSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE-DA-----GRADQAFLARMVEAV 160 (325)
T ss_dssp CSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE-TG-----GGSCHHHHHHHHHHH
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc-cc-----ccchHHHHHHHHHHH
Confidence 555422 234566666678899999999999877544 12 244556666666663
No 227
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=34.29 E-value=50 Score=31.52 Aligned_cols=52 Identities=21% Similarity=0.282 Sum_probs=32.4
Q ss_pred CHHHHHHHHHhCCceEEEecCCC---------CH-HHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 012335 23 SVEMAEKLLRAGMNVARFNFSHG---------SH-AYHQETLDNLRTAMNNTGILCAVMLDTKG 76 (466)
Q Consensus 23 ~~~~l~~li~~G~~v~RiN~shg---------~~-~~~~~~i~~ir~~~~~~~~~i~i~~Dl~G 76 (466)
+.+.++.|-+.|+|++||-++.. .. +...+.++.+=+.+.+.| +.+++|+-.
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~g--i~vild~h~ 94 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKG--AYAVVDPHN 94 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTT--CEEEEEECC
T ss_pred CHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEeccc
Confidence 48899999999999999988642 11 222223333333333444 467888864
No 228
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=34.25 E-value=1.1e+02 Score=34.84 Aligned_cols=68 Identities=12% Similarity=0.172 Sum_probs=40.1
Q ss_pred hhcHHHHHhccCcCCCcEEEEcCC---------------CChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc
Q 012335 181 EKDKEDILNWGVPNKIDMIALSFV---------------RKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN 245 (466)
Q Consensus 181 e~D~~di~~~~~~~~~d~v~~sfV---------------~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~ 245 (466)
..+...+.+.+.+.|+|+|.+.+- ++++.+.++-+.+.+. .+++|++|+ ++ .+.++.+++..
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~-~~-~~~~~~~~a~~ 723 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKL-TP-NVTDIVSIARA 723 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEE-CS-CSSCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEe-CC-ChHHHHHHHHH
Confidence 344444435666789999999652 2233333333333322 267899999 33 34456666555
Q ss_pred -----CCeeEE
Q 012335 246 -----SDAFMV 251 (466)
Q Consensus 246 -----sDgImi 251 (466)
+|+|.+
T Consensus 724 ~~~~G~d~i~v 734 (1025)
T 1gte_A 724 AKEGGADGVTA 734 (1025)
T ss_dssp HHHHTCSEEEE
T ss_pred HHHcCCCEEEE
Confidence 699988
No 229
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=34.21 E-value=2.3e+02 Score=25.58 Aligned_cols=117 Identities=13% Similarity=0.100 Sum_probs=65.0
Q ss_pred hccCcCCCcEEEEcCCC------ChhhHHHHHHHHHhcCCCceEEE-e--ec--C----HHHHhcHHHHHhc-----CCe
Q 012335 189 NWGVPNKIDMIALSFVR------KGSDLVEVRNLLRVHAKNILLMS-K--VE--N----LEGVANFDDVLAN-----SDA 248 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~------sa~dv~~~r~~l~~~~~~~~Iia-K--IE--~----~~av~nideI~~~-----sDg 248 (466)
+.+.+.|+|+|-+.... +..++.++++.+.+.|-.+..+. - +- + .++++.+...++. ++.
T Consensus 21 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 100 (278)
T 1i60_A 21 ELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKY 100 (278)
T ss_dssp HHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 67788999999988222 45788899999988764332111 1 11 1 2345555555554 355
Q ss_pred eEEeCCcccCcCC----chhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcC--CCCCHHHHHhHHHh
Q 012335 249 FMVARGDLGMEIP----IEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKS--PRPTRAEATDVANA 310 (466)
Q Consensus 249 ImiaRgDLg~e~~----~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~--p~PTRAEvsDv~na 310 (466)
|.+..|.-.-..+ ++.+...-+++...|.++|..+.+ |-+-.. ...|.+++.++...
T Consensus 101 v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l-----En~~~~~~~~~~~~~~~~l~~~ 163 (278)
T 1i60_A 101 VVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIAL-----EFVGHPQCTVNTFEQAYEIVNT 163 (278)
T ss_dssp EEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEE-----ECCCCTTBSSCSHHHHHHHHHH
T ss_pred EEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEE-----EecCCccchhcCHHHHHHHHHH
Confidence 6554433211223 234444556666677777765543 222222 34566666666655
No 230
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=34.15 E-value=42 Score=33.56 Aligned_cols=93 Identities=15% Similarity=0.135 Sum_probs=52.6
Q ss_pred HHHHhccCcCCCcEEEEcCC------CChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHh----cCCeeEEeCC
Q 012335 185 EDILNWGVPNKIDMIALSFV------RKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLA----NSDAFMVARG 254 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV------~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~----~sDgImiaRg 254 (466)
++. +.+.+.|+|+|.+|-- .....+..+.++....+.++.||+- -|+.+-.++++ =+|+++|||.
T Consensus 229 e~A-~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~----GGI~~g~Dv~kaLalGA~aV~iGr~ 303 (352)
T 3sgz_A 229 EDA-ELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMD----GGVRTGTDVLKALALGARCIFLGRP 303 (352)
T ss_dssp HHH-HHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEE----SSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHH-HHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHH
Confidence 344 5568899999998532 1223455555544444456888873 24444444444 3899999996
Q ss_pred cccCc--CCch----hHHHHHHHHHHHHHHcCCC
Q 012335 255 DLGME--IPIE----KIFLAQKVMIHKANIQGKP 282 (466)
Q Consensus 255 DLg~e--~~~e----~v~~~qk~ii~~~~~~gkP 282 (466)
=|-.. -+.+ .+..+++++-......|..
T Consensus 304 ~l~~l~~~G~~gv~~~l~~l~~el~~~m~~~G~~ 337 (352)
T 3sgz_A 304 ILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQ 337 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 55210 1222 2334455555556666654
No 231
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=34.00 E-value=56 Score=31.78 Aligned_cols=72 Identities=17% Similarity=0.126 Sum_probs=45.9
Q ss_pred hccCcCCCcEEEEcCC----CChhhHHHHHHHHHhc-CCC-ceEEEeecCHHHHhcHHHHHhc-CCeeEEeCCcccCcC
Q 012335 189 NWGVPNKIDMIALSFV----RKGSDLVEVRNLLRVH-AKN-ILLMSKVENLEGVANFDDVLAN-SDAFMVARGDLGMEI 260 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV----~sa~dv~~~r~~l~~~-~~~-~~IiaKIE~~~av~nideI~~~-sDgImiaRgDLg~e~ 260 (466)
+.+.+.|+|++-+.+. .+.+++.++.+..... +.. +.+..-+-..+-++++.+.++. ++|+.+||.=+.-.+
T Consensus 184 ~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~ 262 (304)
T 1to3_A 184 KELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSVI 262 (304)
T ss_dssp HHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGGT
T ss_pred HHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCccc
Confidence 5667899999999984 3455655555543332 222 2233334233455778888776 799999998886533
No 232
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=33.82 E-value=70 Score=31.71 Aligned_cols=60 Identities=8% Similarity=0.087 Sum_probs=39.0
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 10 KTKIVCTLGPASRSVE----MAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 10 ~tkIi~TiGp~~~~~~----~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
+....+|+|- .+++ ..+++.++|.+.+.+++.|++.+.-.+.++.+|++ .|..+.+++|.
T Consensus 134 ~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l~vDa 197 (378)
T 2qdd_A 134 PVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAG---LPDGHRVTFDV 197 (378)
T ss_dssp CEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHS---CCTTCEEEEEC
T ss_pred CCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHH---hCCCCEEEEeC
Confidence 4556678764 2443 34567889999999999998776656666666653 33334455554
No 233
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=33.81 E-value=72 Score=31.39 Aligned_cols=106 Identities=15% Similarity=0.131 Sum_probs=66.4
Q ss_pred hhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCC--CceEEEee-------cC--HH-HHhcHHHHHhcCCe
Q 012335 181 EKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAK--NILLMSKV-------EN--LE-GVANFDDVLANSDA 248 (466)
Q Consensus 181 e~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~--~~~IiaKI-------E~--~~-av~nideI~~~sDg 248 (466)
+.|.+.+.+.|.+.|++.++++-+ +.++...+.++...... .+.+++-+ .. .+ .++.+.+.++..+.
T Consensus 51 ~~d~~~vl~rA~~aGV~~ii~~g~-~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~ 129 (325)
T 3ipw_A 51 EEDIDVVLQRAERNGLSHIIITSG-CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNID 129 (325)
T ss_dssp CCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGG
T ss_pred ccCHHHHHHHHHHcCCcEEEEccC-CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCC
Confidence 457766657889999998877754 57777777776655321 11344443 11 11 45566666655434
Q ss_pred eEEeCCcccCcCCc-h-hHHHHH----HHHHHHHHH-cCCCeEEee
Q 012335 249 FMVARGDLGMEIPI-E-KIFLAQ----KVMIHKANI-QGKPVVTAT 287 (466)
Q Consensus 249 ImiaRgDLg~e~~~-e-~v~~~q----k~ii~~~~~-~gkPvi~AT 287 (466)
=++|=|..|.+... . .-...| ++.++.|++ .++||++=|
T Consensus 130 ~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~ 175 (325)
T 3ipw_A 130 KVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHC 175 (325)
T ss_dssp GEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEE
T ss_pred CEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 45666788877643 1 112445 456788999 999999876
No 234
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=33.80 E-value=75 Score=30.42 Aligned_cols=98 Identities=10% Similarity=-0.001 Sum_probs=51.9
Q ss_pred CChhcHHHHHhccCcCCCcEEEEcCCC---------C---------------h-----hhHHHHHHHHHhcCCCceEEEe
Q 012335 179 LTEKDKEDILNWGVPNKIDMIALSFVR---------K---------------G-----SDLVEVRNLLRVHAKNILLMSK 229 (466)
Q Consensus 179 lte~D~~di~~~~~~~~~d~v~~sfV~---------s---------------a-----~dv~~~r~~l~~~~~~~~IiaK 229 (466)
++..+...+.+.+.+.|+|+|.++--- + . ..+..++++-...+.+++||+-
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~ 248 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGT 248 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEE
Confidence 344555554466788999999876321 0 0 1234444443333336777763
Q ss_pred --ecCHHHHhcHHHHH-hcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCC
Q 012335 230 --VENLEGVANFDDVL-ANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGK 281 (466)
Q Consensus 230 --IE~~~av~nideI~-~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gk 281 (466)
|.+.+-+ .+.+ .-+|+|++||+=|. -++.-+..+.+.+-....+.|.
T Consensus 249 GGI~~~~da---~~~l~~GAd~V~vg~~~l~--~~p~~~~~i~~~l~~~l~~~g~ 298 (311)
T 1jub_A 249 GGIETGQDA---FEHLLCGATMLQIGTALHK--EGPAIFDRIIKELEEIMNQKGY 298 (311)
T ss_dssp SSCCSHHHH---HHHHHHTCSEEEECHHHHH--HCTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHH---HHHHHcCCCEEEEchHHHh--cCcHHHHHHHHHHHHHHHHcCC
Confidence 4444332 2222 23899999998663 1122333444555555555554
No 235
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=33.69 E-value=1.5e+02 Score=28.41 Aligned_cols=92 Identities=9% Similarity=0.106 Sum_probs=60.3
Q ss_pred cCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc--CCeeEEeCCcccCcCCchhHHHHHH
Q 012335 193 PNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN--SDAFMVARGDLGMEIPIEKIFLAQK 270 (466)
Q Consensus 193 ~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~--sDgImiaRgDLg~e~~~e~v~~~qk 270 (466)
..++..+++.-....+..+.+.+...+.|-.. ....+++++++. .|+|+|+ .|. ....
T Consensus 22 ~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ll~~~~vD~V~I~-------tp~----~~H~ 81 (337)
T 3ip3_A 22 DEECSITGIAPGVPEEDLSKLEKAISEMNIKP---------KKYNNWWEMLEKEKPDILVIN-------TVF----SLNG 81 (337)
T ss_dssp CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCC---------EECSSHHHHHHHHCCSEEEEC-------SSH----HHHH
T ss_pred CCCcEEEEEecCCchhhHHHHHHHHHHcCCCC---------cccCCHHHHhcCCCCCEEEEe-------CCc----chHH
Confidence 45666666654332245556666655443221 234678888875 6999997 333 3456
Q ss_pred HHHHHHHHcCCCeEEeehhhHhhhcCC-CCCHHHHHhHHHhhhh
Q 012335 271 VMIHKANIQGKPVVTATQMLESMIKSP-RPTRAEATDVANAAEN 313 (466)
Q Consensus 271 ~ii~~~~~~gkPvi~ATqmLeSM~~~p-~PTRAEvsDv~naaE~ 313 (466)
.++.+|-++||+|++ +.| ..|.+|...+..+|++
T Consensus 82 ~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~~ 116 (337)
T 3ip3_A 82 KILLEALERKIHAFV---------EKPIATTFEDLEKIRSVYQK 116 (337)
T ss_dssp HHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCcEEE---------eCCCCCCHHHHHHHHHHHHH
Confidence 788899999999985 334 3678899888888665
No 236
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=33.61 E-value=65 Score=31.48 Aligned_cols=83 Identities=13% Similarity=0.060 Sum_probs=57.8
Q ss_pred CcCCCcEEEEcCCCC--------------hhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCccc
Q 012335 192 VPNKIDMIALSFVRK--------------GSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLG 257 (466)
Q Consensus 192 ~~~~~d~v~~sfV~s--------------a~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg 257 (466)
.+.++.+|+-++.+. .+-++.++++..+. .+.+++-+-+++.++-+ .+..|.+-||-+++-
T Consensus 69 ~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--GLpv~Tev~D~~~v~~l---~~~vd~lkIgA~~~~ 143 (298)
T 3fs2_A 69 DKLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEY--GFPVLTDIHTEEQCAAV---APVVDVLQIPAFLCR 143 (298)
T ss_dssp HHHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHH--CCCEEEECCSHHHHHHH---TTTCSEEEECGGGTT
T ss_pred HHcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHH---HhhCCEEEECccccC
Confidence 345677777764442 35677778877665 48899988887776544 445999999966653
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
..+ +++.+.+.||||++.|.|.
T Consensus 144 ------n~~-----LLr~va~~gkPVilK~Gms 165 (298)
T 3fs2_A 144 ------QTD-----LLIAAARTGRVVNVKKGQF 165 (298)
T ss_dssp ------CHH-----HHHHHHHTTSEEEEECCTT
T ss_pred ------CHH-----HHHHHHccCCcEEEeCCCC
Confidence 233 4555668899999998773
No 237
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=33.51 E-value=31 Score=33.14 Aligned_cols=68 Identities=13% Similarity=0.211 Sum_probs=41.7
Q ss_pred HHHHHhccCcCCCcEEEEcCCC---ChhhHHHHHHHHHhcCCCceEEEeecC-HHHHhcHHHHHhc-CCeeEEeCC
Q 012335 184 KEDILNWGVPNKIDMIALSFVR---KGSDLVEVRNLLRVHAKNILLMSKVEN-LEGVANFDDVLAN-SDAFMVARG 254 (466)
Q Consensus 184 ~~di~~~~~~~~~d~v~~sfV~---sa~dv~~~r~~l~~~~~~~~IiaKIE~-~~av~nideI~~~-sDgImiaRg 254 (466)
.+++ +.+.+.|+|+|.+.-.. ..-|+..++++......++.++| |. ....+++.++.++ +||++||..
T Consensus 172 ~ee~-~~A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVa--egGI~t~edv~~l~~~GadgvlVGsa 244 (272)
T 3qja_A 172 EQEA-DRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIA--ESGVRGTADLLAYAGAGADAVLVGEG 244 (272)
T ss_dssp HHHH-HHHHHHTCSEEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEEE--ESCCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHH-HHHHHCCCCEEEECCCcccccccCHHHHHHHHHhCcccCEEEE--ECCCCCHHHHHHHHHcCCCEEEEcHH
Confidence 3455 56678899999998432 12355666666554434567776 22 1123456666666 899999853
No 238
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=33.44 E-value=1.5e+02 Score=23.02 Aligned_cols=61 Identities=10% Similarity=0.155 Sum_probs=34.5
Q ss_pred HHHHHhcCCcEEEEE----cCCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 343 VRTANCIKAALILVL----TRGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 343 v~~a~~~~a~~Ivv~----T~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
.+.......+.+++= ..+|.. .+.+.+..|.+||++++ . ..+...+ .-.+-.|+.-++..+
T Consensus 40 ~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s------~-----~~~~~~~-~~~~~~ga~~~l~Kp 105 (126)
T 1dbw_A 40 LAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVIT------G-----HGDVPMA-VEAMKAGAVDFIEKP 105 (126)
T ss_dssp HHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEE------C-----TTCHHHH-HHHHHTTCSEEEESS
T ss_pred HHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEE------C-----CCCHHHH-HHHHHhCHHHheeCC
Confidence 334445556666553 234543 45676677999999992 1 0222222 223456888888765
No 239
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=33.40 E-value=1.5e+02 Score=32.14 Aligned_cols=96 Identities=16% Similarity=0.097 Sum_probs=70.3
Q ss_pred ChhcHHHHHhccCcCCCcEEEEcCCC------------ChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc--
Q 012335 180 TEKDKEDILNWGVPNKIDMIALSFVR------------KGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-- 245 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~sfV~------------sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-- 245 (466)
++.-++-| +||.++|.+||.+--=- -..|+.+|-+|..++ .++|+.--|+..--+++++.++.
T Consensus 308 ~~~~k~yI-DfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~k--gV~i~lw~~~~~~~~~~~~~~~~~~ 384 (641)
T 3a24_A 308 NPTYKAYI-DFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASK--NVGIILWAGYHAFERDMENVCRHYA 384 (641)
T ss_dssp HHHHHHHH-HHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHT--TCEEEEEEEHHHHHTSHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhc--CCEEEEEeeCcchHHHHHHHHHHHH
Confidence 44556777 99999999999862110 125799999999875 57888888876544567777765
Q ss_pred ---CCeeEEe---CCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 246 ---SDAFMVA---RGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 246 ---sDgImia---RgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
.|||-++ |+| +.+.....+|++.|.+++.-|..
T Consensus 385 ~~Gv~gvK~Df~~~~~-------Q~~v~~y~~i~~~aA~~~l~V~f 423 (641)
T 3a24_A 385 EMGVKGFKVDFMDRDD-------QEMTAFNYRAAEMCAKYKLILDL 423 (641)
T ss_dssp HHTCCEEEEECCCCCS-------HHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HcCCCEEEECCCCCCc-------HHHHHHHHHHHHHHHHcCCEEEc
Confidence 4888875 333 67777889999999999976554
No 240
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=33.36 E-value=1.3e+02 Score=26.51 Aligned_cols=86 Identities=10% Similarity=0.135 Sum_probs=50.0
Q ss_pred ChhcHHHHHhccCcCCCcEEEEcCCC-Ch-hhHHHHHHHHHhcCCCceEEE-eecCHHHHhcHHHHHh-cCCeeEEeCCc
Q 012335 180 TEKDKEDILNWGVPNKIDMIALSFVR-KG-SDLVEVRNLLRVHAKNILLMS-KVENLEGVANFDDVLA-NSDAFMVARGD 255 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~sfV~-sa-~dv~~~r~~l~~~~~~~~Iia-KIE~~~av~nideI~~-~sDgImiaRgD 255 (466)
+..+...+.+.+.+.|+++|-+.+-. .+ +.+..+|+.+. .+..|-+ .+.+++-+ ++-.+ -+|.| ++++-
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~---~~~~ig~~~v~~~~~~---~~a~~~Gad~i-v~~~~ 92 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE---KGAIIGAGTVTSVEQC---RKAVESGAEFI-VSPHL 92 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH---TTCEEEEESCCSHHHH---HHHHHHTCSEE-ECSSC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC---CCcEEEecccCCHHHH---HHHHHcCCCEE-EcCCC
Confidence 34444444355667899999775432 11 22555666543 2344434 44555432 33232 37999 77652
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 256 LGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 256 Lg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
+ ..+++.|++.|+|++.
T Consensus 93 -----~--------~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 93 -----D--------EEISQFCKEKGVFYMP 109 (205)
T ss_dssp -----C--------HHHHHHHHHHTCEEEC
T ss_pred -----C--------HHHHHHHHHcCCcEEC
Confidence 1 4688899999999984
No 241
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=33.17 E-value=1e+02 Score=27.29 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=35.1
Q ss_pred HHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCc
Q 012335 24 VEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGIL 67 (466)
Q Consensus 24 ~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~ 67 (466)
.+.++.+.++|++.+=|.+...+.++..+.++.+++....++.+
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~v~ 72 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDAL 72 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 47889999999999988877778887788888888776655543
No 242
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=33.02 E-value=74 Score=28.75 Aligned_cols=71 Identities=11% Similarity=0.070 Sum_probs=42.1
Q ss_pred cHHHHHhccCcCCCcEEEEcCCC---C------hhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-CCeeEEe
Q 012335 183 DKEDILNWGVPNKIDMIALSFVR---K------GSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-SDAFMVA 252 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~sfV~---s------a~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-sDgImia 252 (466)
+.+++ ..+. .|+|||.++-+- + .-+...++.+......+++++| |=-. ..+|+.+.+++ ++||-++
T Consensus 97 t~~e~-~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPvia-iGGI-~~~nv~~~~~~Ga~gVav~ 172 (210)
T 3ceu_A 97 SVEEV-KNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMA-LGGI-NEDNLLEIKDFGFGGAVVL 172 (210)
T ss_dssp SHHHH-HTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEE-ESSC-CTTTHHHHHHTTCSEEEES
T ss_pred CHHHH-HHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEE-ECCC-CHHHHHHHHHhCCCEEEEh
Confidence 34456 5566 899999987542 2 1245666665543112466666 2111 14688888876 7899888
Q ss_pred CCccc
Q 012335 253 RGDLG 257 (466)
Q Consensus 253 RgDLg 257 (466)
++=+.
T Consensus 173 s~i~~ 177 (210)
T 3ceu_A 173 GDLWN 177 (210)
T ss_dssp HHHHT
T ss_pred HHhHc
Confidence 65443
No 243
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=32.80 E-value=82 Score=31.00 Aligned_cols=102 Identities=17% Similarity=0.202 Sum_probs=0.0
Q ss_pred CCChhcHH-HHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHh--cCCeeEEeCC
Q 012335 178 TLTEKDKE-DILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLA--NSDAFMVARG 254 (466)
Q Consensus 178 ~lte~D~~-di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~--~sDgImiaRg 254 (466)
.++..+.. .+.+...+.|+++|=-|+ .++|+..++++-... .++|++= |+....+.+.++++ .+|+|++..+
T Consensus 195 ~~~~~~a~~~~~~~l~~~~i~~iEqP~--~~~d~~~~~~l~~~~--~iPI~~d-E~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (369)
T 2p8b_A 195 GWKNSANTLTALRSLGHLNIDWIEQPV--IADDIDAMAHIRSKT--DLPLMID-EGLKSSREMRQIIKLEAADKVNIKLM 269 (369)
T ss_dssp TTBSHHHHHHHHHTSTTSCCSCEECCB--CTTCHHHHHHHHHTC--CSCEEES-TTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcEEECCC--CcccHHHHHHHHHhC--CCCEEeC-CCCCCHHHHHHHHHhCCCCEEEeecc
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHh
Q 012335 255 DLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLES 292 (466)
Q Consensus 255 DLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeS 292 (466)
-.|- ..--.+++..|+++|.++.+.+ |+||
T Consensus 270 ~~GG-------it~~~~i~~~A~~~g~~~~~~~-~~es 299 (369)
T 2p8b_A 270 KCGG-------IYPAVKLAHQAEMAGIECQVGS-MVES 299 (369)
T ss_dssp HHTS-------HHHHHHHHHHHHHTTCEEEECC-SSCC
T ss_pred hhCC-------HHHHHHHHHHHHHcCCcEEecC-CCcc
No 244
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=32.73 E-value=1.4e+02 Score=29.92 Aligned_cols=63 Identities=13% Similarity=0.170 Sum_probs=40.2
Q ss_pred CeEEEEec-CCCCCCHHHH-----HHHHHhCCceEEEecCCC------CHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 10 KTKIVCTL-GPASRSVEMA-----EKLLRAGMNVARFNFSHG------SHAYHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 10 ~tkIi~Ti-Gp~~~~~~~l-----~~li~~G~~v~RiN~shg------~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
+....+|+ |.-..+++.+ +++++.|.+.+.+..... +.++-.+.++.+|++ .|..+.|++|..
T Consensus 125 ~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a---~g~~~~l~vDaN 199 (393)
T 4dwd_A 125 RLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVREL---LGPDAVIGFDAN 199 (393)
T ss_dssp EEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHH---HCTTCCEEEECT
T ss_pred ceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHH---hCCCCeEEEECC
Confidence 46677887 3433455554 566788999999999654 566655566666654 444455666653
No 245
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=32.51 E-value=77 Score=31.64 Aligned_cols=62 Identities=15% Similarity=0.234 Sum_probs=41.0
Q ss_pred CeEEEEecCCCCC-CHH----HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 10 KTKIVCTLGPASR-SVE----MAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 10 ~tkIi~TiGp~~~-~~~----~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
+....+|+|.... +++ ..+++.++|.+.+.+...|++.+.-.+.++.+|++. |.-+.|++|.
T Consensus 148 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av---g~d~~l~vDa 214 (393)
T 2og9_A 148 SVRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL---GDAVPLMVDA 214 (393)
T ss_dssp EEEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH---CTTSCEEEEC
T ss_pred ceEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc---CCCCEEEEEC
Confidence 3455666543312 454 445678899999999999988777677777777654 3334455554
No 246
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=32.38 E-value=1.5e+02 Score=29.12 Aligned_cols=122 Identities=15% Similarity=0.105 Sum_probs=0.0
Q ss_pred CCChhcHHHHHhccCcCCCcEEEE-----cCCCC-------hhhHHHHHHHHHhcCCCceEEEe-ecCHHHHhcHHHHHh
Q 012335 178 TLTEKDKEDILNWGVPNKIDMIAL-----SFVRK-------GSDLVEVRNLLRVHAKNILLMSK-VENLEGVANFDDVLA 244 (466)
Q Consensus 178 ~lte~D~~di~~~~~~~~~d~v~~-----sfV~s-------a~dv~~~r~~l~~~~~~~~IiaK-IE~~~av~nideI~~ 244 (466)
.++..++..|.+...+.|+|.|=+ ++..| +.+.+.++.+.. ...++++.+. .=+..-.+.++...+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~-~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAG-EISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHT-TCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHh-hCCCCEEEEEecCCcccHHHHHHHHh
Q ss_pred c-CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHhhhhh
Q 012335 245 N-SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAAENF 314 (466)
Q Consensus 245 ~-sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naaE~~ 314 (466)
+ .|++.|. ++..++ ...+..++.|+++|+.++.. ....+.-+...+.+++.+++..
T Consensus 105 aGvd~v~I~-------~~~s~~-~~~~~~i~~ak~~G~~v~~~------~~~a~~~~~e~~~~ia~~~~~~ 161 (345)
T 1nvm_A 105 AGARVVRVA-------THCTEA-DVSKQHIEYARNLGMDTVGF------LMMSHMIPAEKLAEQGKLMESY 161 (345)
T ss_dssp HTCCEEEEE-------EETTCG-GGGHHHHHHHHHHTCEEEEE------EESTTSSCHHHHHHHHHHHHHH
T ss_pred CCcCEEEEE-------EeccHH-HHHHHHHHHHHHCCCEEEEE------EEeCCCCCHHHHHHHHHHHHHC
No 247
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=32.35 E-value=1e+02 Score=28.97 Aligned_cols=45 Identities=18% Similarity=0.191 Sum_probs=37.5
Q ss_pred HHHHHHHHHhCCceEEEecCC---------CCHHHHHHHHHHHHHHHHHcCCce
Q 012335 24 VEMAEKLLRAGMNVARFNFSH---------GSHAYHQETLDNLRTAMNNTGILC 68 (466)
Q Consensus 24 ~~~l~~li~~G~~v~RiN~sh---------g~~~~~~~~i~~ir~~~~~~~~~i 68 (466)
.+.++++++.|++++-|---+ .+.++..+..+.+++.+++++.++
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~l 99 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALF 99 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEE
Confidence 688999999999999998777 457778888899999988887653
No 248
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=32.30 E-value=1.3e+02 Score=23.72 Aligned_cols=59 Identities=5% Similarity=0.027 Sum_probs=33.9
Q ss_pred HHHhcCCcEEEEE----cCCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 345 TANCIKAALILVL----TRGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 345 ~a~~~~a~~Ivv~----T~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
...+...++|++= ..+|.. .+.+.+..|.+||++++ . ..+..... -.+-.|+.-++..+
T Consensus 44 ~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls------~-----~~~~~~~~-~~~~~ga~~~l~Kp 107 (133)
T 3b2n_A 44 LIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVT------T-----FKRPGYFE-KAVVNDVDAYVLKE 107 (133)
T ss_dssp HHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEE------S-----CCCHHHHH-HHHHTTCSEEEETT
T ss_pred HHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEe------c-----CCCHHHHH-HHHHcCCcEEEECC
Confidence 3344466766653 235543 45666667999999992 1 02222222 23456888888765
No 249
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=32.14 E-value=1.2e+02 Score=28.10 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=34.7
Q ss_pred HHHHHhcCCeeEEeCCc------ccCcC----C--chhHHHHHHHHHHHHHHcCCCeEEee---hhh
Q 012335 239 FDDVLANSDAFMVARGD------LGMEI----P--IEKIFLAQKVMIHKANIQGKPVVTAT---QML 290 (466)
Q Consensus 239 ideI~~~sDgImiaRgD------Lg~e~----~--~e~v~~~qk~ii~~~~~~gkPvi~AT---qmL 290 (466)
++++++..|||++.-|. ++-+- + .+.-......+++.|.+.++|++--. |+|
T Consensus 55 ~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll 121 (254)
T 3fij_A 55 AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLV 121 (254)
T ss_dssp HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHH
T ss_pred HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHH
Confidence 67778889999999772 11111 0 12333456789999999999987544 555
No 250
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=31.94 E-value=77 Score=30.34 Aligned_cols=49 Identities=14% Similarity=0.055 Sum_probs=38.3
Q ss_pred HHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 25 EMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 25 ~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
+..++|+++|+++.=+|+--...++..++...++...+..+.| |.+|+.
T Consensus 38 ~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~p--isIDT~ 86 (271)
T 2yci_X 38 EWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLP--CCLDST 86 (271)
T ss_dssp HHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCC--EEEECS
T ss_pred HHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCe--EEEeCC
Confidence 3457799999999999997777778888888888887766655 455765
No 251
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=31.89 E-value=99 Score=25.14 Aligned_cols=62 Identities=5% Similarity=0.027 Sum_probs=36.8
Q ss_pred HHHHHHhcCCcEEEEEc----CCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 342 AVRTANCIKAALILVLT----RGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 342 av~~a~~~~a~~Ivv~T----~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
|.+...+...++|++-. .+|.. .+.+.+..|.+||++++ . ..+.... .-.+-.|+.-++..+
T Consensus 58 al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls------~-----~~~~~~~-~~~~~~g~~~~l~Kp 124 (150)
T 4e7p_A 58 AIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVT------T-----FKRAGYF-ERAVKAGVDAYVLKE 124 (150)
T ss_dssp HHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEE------S-----CCCHHHH-HHHHHTTCSEEEETT
T ss_pred HHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEe------C-----CCCHHHH-HHHHHCCCcEEEecC
Confidence 33444556678776643 34443 45676778999999992 1 0222232 234456888888765
No 252
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=31.89 E-value=1.1e+02 Score=28.06 Aligned_cols=62 Identities=13% Similarity=0.062 Sum_probs=40.4
Q ss_pred hccCcCCCcEEEEcCC--CChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeC
Q 012335 189 NWGVPNKIDMIALSFV--RKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVAR 253 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV--~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaR 253 (466)
+.+.+.|+|+|.+..- .+ +...++.+.+.+.|..+.+...-.|+ ++.+.+++..+|.|.+..
T Consensus 79 ~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~ms 142 (230)
T 1tqj_A 79 EDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMS 142 (230)
T ss_dssp HHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEES
T ss_pred HHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEE
Confidence 3457899999998865 44 45555555666655444444433554 556788888899877664
No 253
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=31.77 E-value=1.5e+02 Score=23.88 Aligned_cols=57 Identities=12% Similarity=0.184 Sum_probs=38.4
Q ss_pred CCCeeEeeecCCCCcEEec-CCCEEEEEeCCCCCCCccEEeecchhhh-hccCCCCEEEE
Q 012335 75 KGPEIRTGFLKDGKPIQLV-QGQEITISTDYSLKGDEKMISMSYKKLA-EDLRPGSVILC 132 (466)
Q Consensus 75 ~GpkiR~g~~~~~~~i~l~-~G~~v~l~~~~~~~~~~~~i~v~~~~~~-~~v~~Gd~i~i 132 (466)
.|..+|+|-+-...++.-. .|..++|.... .......++|.|..++ +.++.|.-|..
T Consensus 7 ~~~~iRvgG~V~~GSv~r~~~~~~v~F~vtD-~~~~~~~v~V~Y~GilPDlFrEGqgVV~ 65 (94)
T 2kct_A 7 KLHTVRLFGTVAADGLTMLDGAPGVRFRLED-KDNTSKTVWVLYKGAVPDTFKPGVEVII 65 (94)
T ss_dssp TTCCEEEEEEECSTTCEECTTSSEEEEEEEC-SSCTTCEEEEEEESCCCTTCCTTCEEEE
T ss_pred CCCeEEEeeEEeCCeEEecCCCCEEEEEEEc-CCCCCcEEEEEECCCCCccccCCCeEEE
Confidence 5889999765433556554 47788887532 1123567999997654 66888988876
No 254
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=31.76 E-value=58 Score=33.58 Aligned_cols=65 Identities=12% Similarity=0.187 Sum_probs=40.8
Q ss_pred hccCcCCCcEEEEcC---------------CCChhhHHHHHHHHHhcCCCceEEE--eecCHHHHhcHHHHHhcCCeeEE
Q 012335 189 NWGVPNKIDMIALSF---------------VRKGSDLVEVRNLLRVHAKNILLMS--KVENLEGVANFDDVLANSDAFMV 251 (466)
Q Consensus 189 ~~~~~~~~d~v~~sf---------------V~sa~dv~~~r~~l~~~~~~~~Iia--KIE~~~av~nideI~~~sDgImi 251 (466)
+.+.+.|+|+|.++. ..+.+-+.++++.+.. .+++||| .|-+..-+. ..+..=+|++++
T Consensus 293 ~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~--~~ipvia~GGI~~~~di~--kala~GAd~V~i 368 (494)
T 1vrd_A 293 EALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARK--YDVPIIADGGIRYSGDIV--KALAAGAESVMV 368 (494)
T ss_dssp HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHT--TTCCEEEESCCCSHHHHH--HHHHTTCSEEEE
T ss_pred HHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhh--cCCCEEEECCcCCHHHHH--HHHHcCCCEEEE
Confidence 445679999999854 1223334444444432 3688999 887765552 223333899999
Q ss_pred eCCccc
Q 012335 252 ARGDLG 257 (466)
Q Consensus 252 aRgDLg 257 (466)
||.=++
T Consensus 369 Gr~~l~ 374 (494)
T 1vrd_A 369 GSIFAG 374 (494)
T ss_dssp SHHHHT
T ss_pred CHHHhc
Confidence 997664
No 255
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=31.70 E-value=1.1e+02 Score=23.85 Aligned_cols=61 Identities=18% Similarity=0.180 Sum_probs=34.3
Q ss_pred HHHHHHhcCCcEEEEEcC----CchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 342 AVRTANCIKAALILVLTR----GGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 342 av~~a~~~~a~~Ivv~T~----sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
|.+...+...++|++--. +|.. .+.+. .++.+||+.++. ........-.+-.|+.-++..+
T Consensus 38 al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr-~~~~~~ii~~t~------------~~~~~~~~~~~~~ga~~~l~KP 103 (120)
T 3f6p_A 38 AVEMVEELQPDLILLDIMLPNKDGVEVCREVR-KKYDMPIIMLTA------------KDSEIDKVIGLEIGADDYVTKP 103 (120)
T ss_dssp HHHHHHTTCCSEEEEETTSTTTHHHHHHHHHH-TTCCSCEEEEEE------------SSCHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHH-hcCCCCEEEEEC------------CCChHHHHHHHhCCcceeEcCC
Confidence 344445667787776432 3433 33443 356799999921 2222223334566888888765
No 256
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=31.42 E-value=71 Score=33.75 Aligned_cols=45 Identities=9% Similarity=0.129 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCce
Q 012335 24 VEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILC 68 (466)
Q Consensus 24 ~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i 68 (466)
.+.+++++++|++++-|..-+.+..+..+..+.+++.+++++.|+
T Consensus 28 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~l 72 (540)
T 3nl6_A 28 YGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPL 72 (540)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCEE
Confidence 488999999999999999999999999999999999999887653
No 257
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=31.39 E-value=75 Score=30.20 Aligned_cols=53 Identities=11% Similarity=0.066 Sum_probs=32.7
Q ss_pred CCHHHHHHHHH-hCCceEEEecCCC------CHHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 012335 22 RSVEMAEKLLR-AGMNVARFNFSHG------SHAYHQETLDNLRTAMNNTGILCAVMLDTKG 76 (466)
Q Consensus 22 ~~~~~l~~li~-~G~~v~RiN~shg------~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~G 76 (466)
.+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=+.+.+.| +.+++|+-+
T Consensus 43 ~~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G--l~vild~h~ 102 (306)
T 2cks_A 43 LTDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARG--LYVIVDWHI 102 (306)
T ss_dssp CSHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTT--CEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHHCC--CEEEEEecC
Confidence 35778898986 7999999988652 22223334444434444555 456778753
No 258
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=31.39 E-value=1.9e+02 Score=26.32 Aligned_cols=101 Identities=14% Similarity=0.151 Sum_probs=57.0
Q ss_pred cHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEee---c----CHHHHhcHHHHHhcCCeeEEeCCc
Q 012335 183 DKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKV---E----NLEGVANFDDVLANSDAFMVARGD 255 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKI---E----~~~av~nideI~~~sDgImiaRgD 255 (466)
|.+++.+.+.+.|++.+.++-+ +.++...+.++..... ++....-+ + +.+.++.+++.+... -.+|=|.
T Consensus 20 ~~~~~l~~~~~~Gv~~~v~~~~-~~~~~~~~~~l~~~~~-~i~~~~G~hP~~~~~~~~~~~~~l~~~~~~~--~~~~iGE 95 (264)
T 1xwy_A 20 DRDDVVACAFDAGVNGLLITGT-NLRESQQAQKLARQYS-SCWSTAGVHPHDSSQWQAATEEAIIELAAQP--EVVAIGE 95 (264)
T ss_dssp THHHHHHHHHHTTCCEEEECCC-SHHHHHHHHHHHHHST-TEEEEECCCGGGGGGCCHHHHHHHHHHHTST--TEEEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHhCC-CEEEEEEECCcccccCCHHHHHHHHHHhcCC--CeEEEEE
Confidence 4444435667899998766533 5777777777665532 33222222 1 123445555555422 2334466
Q ss_pred ccCcCCch-hHHHHH----HHHHHHHHHcCCCeEEee
Q 012335 256 LGMEIPIE-KIFLAQ----KVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 256 Lg~e~~~e-~v~~~q----k~ii~~~~~~gkPvi~AT 287 (466)
.|.+.... .-...| +..++.|.+.|+||++=|
T Consensus 96 ~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~ 132 (264)
T 1xwy_A 96 CGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHC 132 (264)
T ss_dssp EEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred eccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEc
Confidence 66665321 112334 466889999999999866
No 259
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=31.34 E-value=1.9e+02 Score=26.96 Aligned_cols=41 Identities=17% Similarity=0.120 Sum_probs=29.0
Q ss_pred cHHHHHhccCcCCCcEEEEcCCC------ChhhHHHHHHHHHhcCCC
Q 012335 183 DKEDILNWGVPNKIDMIALSFVR------KGSDLVEVRNLLRVHAKN 223 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~sfV~------sa~dv~~~r~~l~~~~~~ 223 (466)
+..+..+.+.+.|+|+|-+.+.. +..++.++++.+.+.|-.
T Consensus 37 ~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 83 (296)
T 2g0w_A 37 SFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMK 83 (296)
T ss_dssp CHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCc
Confidence 33333377889999999987631 356788899999887643
No 260
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=31.28 E-value=99 Score=28.80 Aligned_cols=93 Identities=11% Similarity=0.025 Sum_probs=50.4
Q ss_pred hhcHHHHHhccCcCCCcEEEEc--CC---C-----------------ChhhHHHHHHHHHhcCCCceEEEee-cCHHHHh
Q 012335 181 EKDKEDILNWGVPNKIDMIALS--FV---R-----------------KGSDLVEVRNLLRVHAKNILLMSKV-ENLEGVA 237 (466)
Q Consensus 181 e~D~~di~~~~~~~~~d~v~~s--fV---~-----------------sa~dv~~~r~~l~~~~~~~~IiaKI-E~~~av~ 237 (466)
+.-.+.+ +...+.|+|+|-+. |. - +.++..++-+.+++. .+++++... .++.-..
T Consensus 32 ~~~~~~~-~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~~ 109 (262)
T 1rd5_A 32 ATTAEAL-RLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMFR 109 (262)
T ss_dssp HHHHHHH-HHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHSC
T ss_pred HHHHHHH-HHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHH
Confidence 3344455 56678999988774 32 1 122222222223322 356677654 2322112
Q ss_pred cHHHHHhc-CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 238 NFDDVLAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 238 nideI~~~-sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
.++...++ +||+++. |+.. ++ -.+++..|+++|.+.+.
T Consensus 110 ~~~~a~~aGadgv~v~--d~~~----~~----~~~~~~~~~~~g~~~i~ 148 (262)
T 1rd5_A 110 SLAKMKEAGVHGLIVP--DLPY----VA----AHSLWSEAKNNNLELVL 148 (262)
T ss_dssp CTHHHHHTTCCEEECT--TCBT----TT----HHHHHHHHHHTTCEECE
T ss_pred HHHHHHHcCCCEEEEc--CCCh----hh----HHHHHHHHHHcCCceEE
Confidence 33444444 7999983 6554 32 35677789999988654
No 261
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=31.17 E-value=41 Score=33.04 Aligned_cols=45 Identities=11% Similarity=0.248 Sum_probs=33.5
Q ss_pred EecCCCCCCHHHHHHHHHhC--CceEEEecCCCCHHHHHHHHHHHHH
Q 012335 15 CTLGPASRSVEMAEKLLRAG--MNVARFNFSHGSHAYHQETLDNLRT 59 (466)
Q Consensus 15 ~TiGp~~~~~~~l~~li~~G--~~v~RiN~shg~~~~~~~~i~~ir~ 59 (466)
+-+|...+..+.++.++++| ++..-+|++||.+....+.|+.+|+
T Consensus 99 v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~ 145 (336)
T 1ypf_A 99 ISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKK 145 (336)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHH
Confidence 33555444556778899999 9999999999977766667766665
No 262
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=31.11 E-value=53 Score=30.88 Aligned_cols=72 Identities=13% Similarity=0.138 Sum_probs=45.2
Q ss_pred hcHHHHHhccCcCCCcEEEEcCCC---Ch-----hhHHHHHHHHHhcCCCceEEEe--ecCHHHHhcHHHHHhc-CCeeE
Q 012335 182 KDKEDILNWGVPNKIDMIALSFVR---KG-----SDLVEVRNLLRVHAKNILLMSK--VENLEGVANFDDVLAN-SDAFM 250 (466)
Q Consensus 182 ~D~~di~~~~~~~~~d~v~~sfV~---sa-----~dv~~~r~~l~~~~~~~~IiaK--IE~~~av~nideI~~~-sDgIm 250 (466)
.+.+++ ..+.+.|+|||.++-|. +. ..+..++.+......+++++|- | ..+|+.+++++ +|||.
T Consensus 143 ht~~Ea-~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI----~~~ni~~~~~aGa~gva 217 (243)
T 3o63_A 143 HDPDQV-AAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI----NAQRLPAVLDAGARRIV 217 (243)
T ss_dssp CSHHHH-HHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC----CTTTHHHHHHTTCCCEE
T ss_pred CCHHHH-HHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC----CHHHHHHHHHcCCCEEE
Confidence 445566 56678999999997652 22 2455666654321235666663 4 24688888887 89999
Q ss_pred EeCCcccC
Q 012335 251 VARGDLGM 258 (466)
Q Consensus 251 iaRgDLg~ 258 (466)
|+++=+..
T Consensus 218 v~sai~~a 225 (243)
T 3o63_A 218 VVRAITSA 225 (243)
T ss_dssp ESHHHHTC
T ss_pred EeHHHhCC
Confidence 98654443
No 263
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=31.11 E-value=63 Score=34.06 Aligned_cols=68 Identities=7% Similarity=-0.050 Sum_probs=51.0
Q ss_pred hHHHHHHHHHhcCCCceEEEeecCHHHH-hcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 209 DLVEVRNLLRVHAKNILLMSKVENLEGV-ANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 209 dv~~~r~~l~~~~~~~~IiaKIE~~~av-~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
-+..+++.|.+.+.++.+.+--+....+ +|.+++++-.|.|+.+-.++ ..+..+-+.|+++++|+|.+
T Consensus 87 Ka~~a~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~----------~~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 87 RAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPE----------STSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp HHHHHHHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCH----------HHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCH----------HHHHHHHHHHHHcCCCEEEE
Confidence 3566778888888888877766666554 45667777789888873322 36778889999999999987
No 264
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=30.98 E-value=88 Score=30.65 Aligned_cols=60 Identities=13% Similarity=0.190 Sum_probs=45.3
Q ss_pred HHhcHHHHHhc--CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCC-CCCHHHHHhHHHhh
Q 012335 235 GVANFDDVLAN--SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSP-RPTRAEATDVANAA 311 (466)
Q Consensus 235 av~nideI~~~--sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p-~PTRAEvsDv~naa 311 (466)
...+++++++. .|+|+|+ .|. .....++.+|-++||+|++ ++| ..|.+|...+..+|
T Consensus 76 ~~~~~~~ll~~~~vD~V~I~-------tp~----~~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a 135 (361)
T 3u3x_A 76 RIATAEEILEDENIGLIVSA-------AVS----SERAELAIRAMQHGKDVLV---------DKPGMTSFDQLAKLRRVQ 135 (361)
T ss_dssp EESCHHHHHTCTTCCEEEEC-------CCH----HHHHHHHHHHHHTTCEEEE---------ESCSCSSHHHHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEEe-------CCh----HHHHHHHHHHHHCCCeEEE---------eCCCCCCHHHHHHHHHHH
Confidence 35688999986 6999996 333 3456778899999999996 344 56889999998887
Q ss_pred hhh
Q 012335 312 ENF 314 (466)
Q Consensus 312 E~~ 314 (466)
++.
T Consensus 136 ~~~ 138 (361)
T 3u3x_A 136 AET 138 (361)
T ss_dssp HTT
T ss_pred HHc
Confidence 653
No 265
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=30.92 E-value=55 Score=32.37 Aligned_cols=53 Identities=21% Similarity=0.303 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHhCCceEEEecCCCC---H----HHHHHHHHHHHHH---HHHcCCceEEEecCCC
Q 012335 22 RSVEMAEKLLRAGMNVARFNFSHGS---H----AYHQETLDNLRTA---MNNTGILCAVMLDTKG 76 (466)
Q Consensus 22 ~~~~~l~~li~~G~~v~RiN~shg~---~----~~~~~~i~~ir~~---~~~~~~~i~i~~Dl~G 76 (466)
...+.++.|-+.|+|++||-++... + ......++.++++ +.+.| +.+++|+-.
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~G--i~vild~h~ 132 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEG--LYVIINIHG 132 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEECCCG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 3688999999999999999876421 1 0112334444444 33444 567888874
No 266
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=30.78 E-value=1.1e+02 Score=29.68 Aligned_cols=58 Identities=24% Similarity=0.284 Sum_probs=44.0
Q ss_pred HhcHHHHHhc---CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCC-CCCHHHHHhHHHhh
Q 012335 236 VANFDDVLAN---SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSP-RPTRAEATDVANAA 311 (466)
Q Consensus 236 v~nideI~~~---sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p-~PTRAEvsDv~naa 311 (466)
..+++++++. .|+|+|+ .| +.....++.+|-++||+|++- +| ..|.+|...+..+|
T Consensus 69 ~~~~~~ll~~~~~vD~V~i~-------tp----~~~H~~~~~~al~aGkhVl~E---------KP~a~~~~e~~~l~~~a 128 (330)
T 4ew6_A 69 YTTIEAMLDAEPSIDAVSLC-------MP----PQYRYEAAYKALVAGKHVFLE---------KPPGATLSEVADLEALA 128 (330)
T ss_dssp ESSHHHHHHHCTTCCEEEEC-------SC----HHHHHHHHHHHHHTTCEEEEC---------SSSCSSHHHHHHHHHHH
T ss_pred cCCHHHHHhCCCCCCEEEEe-------CC----cHHHHHHHHHHHHcCCcEEEe---------CCCCCCHHHHHHHHHHH
Confidence 4678898876 6999986 34 345577888899999999953 33 46888998888886
Q ss_pred hh
Q 012335 312 EN 313 (466)
Q Consensus 312 E~ 313 (466)
++
T Consensus 129 ~~ 130 (330)
T 4ew6_A 129 NK 130 (330)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 267
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=30.67 E-value=1.3e+02 Score=28.94 Aligned_cols=91 Identities=13% Similarity=0.100 Sum_probs=49.5
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEE-eCCcccCcCCchhHHH
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMV-ARGDLGMEIPIEKIFL 267 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImi-aRgDLg~e~~~e~v~~ 267 (466)
+.+.+.|+|+|.+++=...+.++. +.+. .++++.++-+.+..... ...-+|+|.+ +++ -|-..+....+.
T Consensus 90 ~~~~~~g~d~V~~~~g~p~~~~~~----l~~~--gi~vi~~v~t~~~a~~~--~~~GaD~i~v~g~~-~GG~~G~~~~~~ 160 (328)
T 2gjl_A 90 AAIIEAGIRVVETAGNDPGEHIAE----FRRH--GVKVIHKCTAVRHALKA--ERLGVDAVSIDGFE-CAGHPGEDDIPG 160 (328)
T ss_dssp HHHHHTTCCEEEEEESCCHHHHHH----HHHT--TCEEEEEESSHHHHHHH--HHTTCSEEEEECTT-CSBCCCSSCCCH
T ss_pred HHHHhcCCCEEEEcCCCcHHHHHH----HHHc--CCCEEeeCCCHHHHHHH--HHcCCCEEEEECCC-CCcCCCCccccH
Confidence 556789999999987554433333 3333 57888888776544322 2233799998 431 111111100011
Q ss_pred HHHHHHHHHH-HcCCCeEEeehhh
Q 012335 268 AQKVMIHKAN-IQGKPVVTATQML 290 (466)
Q Consensus 268 ~qk~ii~~~~-~~gkPvi~ATqmL 290 (466)
. ..+...+ ..+.|+|.+.-+-
T Consensus 161 ~--~~l~~v~~~~~iPviaaGGI~ 182 (328)
T 2gjl_A 161 L--VLLPAAANRLRVPIIASGGFA 182 (328)
T ss_dssp H--HHHHHHHTTCCSCEEEESSCC
T ss_pred H--HHHHHHHHhcCCCEEEECCCC
Confidence 1 2222232 3489999988653
No 268
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=30.59 E-value=1.4e+02 Score=22.78 Aligned_cols=58 Identities=12% Similarity=0.089 Sum_probs=33.8
Q ss_pred HHhcCCcEEEEEc----CCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 346 ANCIKAALILVLT----RGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 346 a~~~~a~~Ivv~T----~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
..+...+.|++=- .+|.. .+.+.+..|..||+.++ . ........-.+-.|+.-++..+
T Consensus 43 ~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s------~------~~~~~~~~~~~~~g~~~~l~KP 105 (120)
T 1tmy_A 43 YKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCS------A------MGQQAMVIEAIKAGAKDFIVKP 105 (120)
T ss_dssp HHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEE------C------TTCHHHHHHHHHTTCCEEEESS
T ss_pred HHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEe------C------CCCHHHHHHHHHhCcceeEeCC
Confidence 3444567666532 34543 45666677999999992 1 2222222333456888888765
No 269
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=30.57 E-value=66 Score=29.56 Aligned_cols=83 Identities=22% Similarity=0.194 Sum_probs=51.9
Q ss_pred hccCcCCCcEEEEcCCC-----ChhhHHHHHHHHHhcCCCceEEE--eecCHHHHhcHHHHHhc-CCeeEEeCCcccCcC
Q 012335 189 NWGVPNKIDMIALSFVR-----KGSDLVEVRNLLRVHAKNILLMS--KVENLEGVANFDDVLAN-SDAFMVARGDLGMEI 260 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~-----sa~dv~~~r~~l~~~~~~~~Iia--KIE~~~av~nideI~~~-sDgImiaRgDLg~e~ 260 (466)
+.+.+.|++.|.+.-.. +.-|...++++.... +++++| =|-++ +++.++.+. +||+|||++=+....
T Consensus 159 ~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~--~ipvia~GGI~~~---~d~~~~~~~Gadgv~vgsal~~~~~ 233 (252)
T 1ka9_F 159 VKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAV--GVPVIASGGAGRM---EHFLEAFQAGAEAALAASVFHFGEI 233 (252)
T ss_dssp HHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCSH---HHHHHHHHTTCSEEEESHHHHTTSS
T ss_pred HHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHHc--CCCEEEeCCCCCH---HHHHHHHHCCCHHHHHHHHHHcCCC
Confidence 44567899988765221 122466666655432 567777 34333 566666665 899999998877776
Q ss_pred CchhHHHHHHHHHHHHHHcCCCe
Q 012335 261 PIEKIFLAQKVMIHKANIQGKPV 283 (466)
Q Consensus 261 ~~e~v~~~qk~ii~~~~~~gkPv 283 (466)
++++. .+.++..|.||
T Consensus 234 ~~~~~-------~~~l~~~~~~~ 249 (252)
T 1ka9_F 234 PIPKL-------KRYLAEKGVHV 249 (252)
T ss_dssp CHHHH-------HHHHHHTTCCB
T ss_pred CHHHH-------HHHHHHCCCCc
Confidence 66553 33467777775
No 270
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=30.49 E-value=1.3e+02 Score=26.85 Aligned_cols=60 Identities=5% Similarity=0.041 Sum_probs=37.7
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEE
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMV 251 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImi 251 (466)
+.+.+.|+|+|.+.--.. ++...+.+.+.+.| .+++.-+......+.+.++...+|.|++
T Consensus 78 ~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~~~~t~~e~~~~~~~~~d~vl~ 137 (220)
T 2fli_A 78 EAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVINPGTPATALEPLLDLVDQVLI 137 (220)
T ss_dssp HHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEECTTSCGGGGGGGTTTCSEEEE
T ss_pred HHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHhhCCEEEE
Confidence 345678999998876555 56666666666554 4455556333334455566666898765
No 271
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=30.23 E-value=2.3e+02 Score=27.70 Aligned_cols=100 Identities=17% Similarity=0.178 Sum_probs=66.3
Q ss_pred CChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc--CCeeEEeCCcc
Q 012335 179 LTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN--SDAFMVARGDL 256 (466)
Q Consensus 179 lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~--sDgImiaRgDL 256 (466)
++..+.+.+ +...+.|+++|=-|+ .++|+..++.+-.. ..++|++ =|+....+.+.++++. +|.|.+-..-.
T Consensus 194 ~~~~~~~~~-~~l~~~~i~~iE~P~--~~~~~~~~~~l~~~--~~ipIa~-dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 267 (368)
T 1sjd_A 194 YTLGDAPQL-ARLDPFGLLLIEQPL--EEEDVLGHAELARR--IQTPICL-DESIVSARAAADAIKLGAVQIVNIKPGRV 267 (368)
T ss_dssp CCGGGHHHH-HTTGGGCCSEEECCS--CTTCHHHHHHHHTT--CSSCEEE-STTCCSHHHHHHHHHTTCCSEEEECTTTT
T ss_pred CCHHHHHHH-HHHHhcCCCeEeCCC--ChhhHHHHHHHHHh--CCCCEEE-CCCcCCHHHHHHHHHcCCCCEEEeccccc
Confidence 344444444 566678999998886 35677777664332 2456544 5777777788888854 79999954444
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHh
Q 012335 257 GMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLES 292 (466)
Q Consensus 257 g~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeS 292 (466)
|- + .--.+++..|+++|.++++ .+|+||
T Consensus 268 GG---i----t~~~~i~~~A~~~g~~~~~-~~~~es 295 (368)
T 1sjd_A 268 GG---Y----LEARRVHDVCAAHGIPVWC-GGMIET 295 (368)
T ss_dssp TS---H----HHHHHHHHHHHHTTCCEEE-CCCCCC
T ss_pred CC---H----HHHHHHHHHHHHcCCcEEe-CCcccc
Confidence 32 2 2235789999999999744 667765
No 272
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=30.22 E-value=65 Score=27.65 Aligned_cols=42 Identities=5% Similarity=-0.029 Sum_probs=34.1
Q ss_pred CCeeEE--eCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 246 SDAFMV--ARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 246 sDgImi--aRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
.|.|+| |-.|+....+.+++....+++++.+++.|.++++.|
T Consensus 63 pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 63 PRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp CSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 575554 556888778888999999999999999998888766
No 273
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=30.16 E-value=75 Score=30.36 Aligned_cols=87 Identities=15% Similarity=0.190 Sum_probs=55.5
Q ss_pred HHHHHhccCcCCCcEEEEc-----CCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhc---HHHHHhc-CCeeEEeCC
Q 012335 184 KEDILNWGVPNKIDMIALS-----FVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVAN---FDDVLAN-SDAFMVARG 254 (466)
Q Consensus 184 ~~di~~~~~~~~~d~v~~s-----fV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~n---ideI~~~-sDgImiaRg 254 (466)
...+.+...+.|+++|.+- |=-+.+++.++|+.. +++|+.| +.+-+ +++-..+ +|+|+++-.
T Consensus 74 p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-----~lPvl~k----dfiid~~qv~~A~~~GAD~VlLi~a 144 (272)
T 3qja_A 74 PAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-----SIPVLRK----DFVVQPYQIHEARAHGADMLLLIVA 144 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-----SSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEGG
T ss_pred HHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-----CCCEEEC----ccccCHHHHHHHHHcCCCEEEEecc
Confidence 3344334466899999763 223467777777653 5777766 23322 3333333 799999767
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 255 DLGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 255 DLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
+|. . .--+.++..|++.|..+++.+
T Consensus 145 ~l~----~----~~l~~l~~~a~~lGl~~lvev 169 (272)
T 3qja_A 145 ALE----Q----SVLVSMLDRTESLGMTALVEV 169 (272)
T ss_dssp GSC----H----HHHHHHHHHHHHTTCEEEEEE
T ss_pred cCC----H----HHHHHHHHHHHHCCCcEEEEc
Confidence 774 2 234667889999999988754
No 274
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=30.11 E-value=68 Score=31.45 Aligned_cols=41 Identities=22% Similarity=0.217 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHhCC-------------ceEEEecCCCCHHHHHHHHHHHHHHHH
Q 012335 22 RSVEMAEKLLRAGM-------------NVARFNFSHGSHAYHQETLDNLRTAMN 62 (466)
Q Consensus 22 ~~~~~l~~li~~G~-------------~v~RiN~shg~~~~~~~~i~~ir~~~~ 62 (466)
...+..+.|.+.|+ +.+||+|++-+.++..+.++.++++.+
T Consensus 382 ~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 382 DSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp CHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 44667777888875 679999998899999999999988765
No 275
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=29.96 E-value=67 Score=32.55 Aligned_cols=45 Identities=11% Similarity=0.200 Sum_probs=31.5
Q ss_pred CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh
Q 012335 246 SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 310 (466)
Q Consensus 246 sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na 310 (466)
.|.+=||-+|+-. +| +++.+.+.|||||+.|-|- |-+|+...++.
T Consensus 135 vd~~KIgS~~~~N------~p-----LL~~va~~gKPViLStGma---------Tl~Ei~~Ave~ 179 (385)
T 1vli_A 135 PSAFKIASYEINH------LP-----LLKYVARLNRPMIFSTAGA---------EISDVHEAWRT 179 (385)
T ss_dssp CSCEEECGGGTTC------HH-----HHHHHHTTCSCEEEECTTC---------CHHHHHHHHHH
T ss_pred CCEEEECcccccC------HH-----HHHHHHhcCCeEEEECCCC---------CHHHHHHHHHH
Confidence 6889999888852 22 3666777899999999863 55565544444
No 276
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=29.82 E-value=1e+02 Score=24.16 Aligned_cols=58 Identities=12% Similarity=0.064 Sum_probs=33.5
Q ss_pred HHhcCCcEEEEEc----CCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 346 ANCIKAALILVLT----RGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 346 a~~~~a~~Ivv~T----~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
..+...+.|++-. .+|.. .+.+-+..|.+||+.++ . ........-.+-.|+.-++..+
T Consensus 42 ~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s------~------~~~~~~~~~~~~~g~~~~l~kp 104 (134)
T 3f6c_A 42 VETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVS------A------KNDHFYGKHCADAGANGFVSKK 104 (134)
T ss_dssp HHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEE------C------C---CTHHHHHHTTCSEEEEGG
T ss_pred HHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEe------C------CCChHHHHHHHHhCCCEEEeCC
Confidence 3445677777643 34543 56677778999999992 1 1221122233456888877765
No 277
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=29.81 E-value=2.5e+02 Score=25.82 Aligned_cols=40 Identities=13% Similarity=0.200 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhcCCCCCEEEE
Q 012335 339 ASSAVRTANCIKAALILVLTRG---------GTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 339 a~~av~~a~~~~a~~Ivv~T~s---------G~ta~~vSk~RP~~PIiAv 379 (466)
+...++.|.+.++++||+-++. |+++..+.+.-| |||+.+
T Consensus 78 ~~~i~~~a~~~~~dliV~G~~~~~~~~~~~~gs~~~~vl~~~~-~PVlvv 126 (290)
T 3mt0_A 78 HQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFAP-CPVLMT 126 (290)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSCTTSTTSCCHHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEecccCCchhhcccCHHHHHHHhcCC-CCEEEe
Confidence 3444566778899999987752 677888877654 999999
No 278
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=29.71 E-value=54 Score=31.71 Aligned_cols=21 Identities=24% Similarity=0.441 Sum_probs=18.8
Q ss_pred HHHHHHHHHhCCceEEEecCC
Q 012335 24 VEMAEKLLRAGMNVARFNFSH 44 (466)
Q Consensus 24 ~~~l~~li~~G~~v~RiN~sh 44 (466)
.+.++.|-+.|+|++|+-+++
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~~ 67 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYSD 67 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEEG
T ss_pred HHHHHHHHHcCCCEEEeeccH
Confidence 678999999999999999873
No 279
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=29.71 E-value=84 Score=30.97 Aligned_cols=41 Identities=10% Similarity=0.250 Sum_probs=32.5
Q ss_pred CCHHHHHHHHHhCC---------------------ceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 012335 22 RSVEMAEKLLRAGM---------------------NVARFNFSHGSHAYHQETLDNLRTAMNN 63 (466)
Q Consensus 22 ~~~~~l~~li~~G~---------------------~v~RiN~shg~~~~~~~~i~~ir~~~~~ 63 (466)
...+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.++
T Consensus 378 ~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~ 439 (444)
T 3if2_A 378 STLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVRE 439 (444)
T ss_dssp CHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHH
Confidence 44566677777775 468999999 999999999999887654
No 280
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=29.67 E-value=55 Score=30.98 Aligned_cols=57 Identities=19% Similarity=0.190 Sum_probs=40.7
Q ss_pred ceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 224 ILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 224 ~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
.++++. .++.+.++++.+|.+.|+.|=+ -++.....+.+++.+++.++|+++-.-++
T Consensus 40 sp~M~~-----~~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVlDpv~~ 96 (265)
T 1v8a_A 40 SPVMAH-----AEEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVLDPVGA 96 (265)
T ss_dssp EEEECC-----CTTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEEECTTB
T ss_pred CccccC-----CHHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcEEEcCccc
Confidence 456653 3556788888899999986644 34444556677888999999998866554
No 281
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=29.62 E-value=2.2e+02 Score=25.34 Aligned_cols=99 Identities=14% Similarity=0.094 Sum_probs=49.3
Q ss_pred HHHHhccCcCCCcEEEEcCCC--Ch-hhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-CCeeEEeCCcccCc-
Q 012335 185 EDILNWGVPNKIDMIALSFVR--KG-SDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-SDAFMVARGDLGME- 259 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV~--sa-~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-sDgImiaRgDLg~e- 259 (466)
+.+ +.+.+.|+|+|.+.... ++ +.+.++-+.+.+.-.+..++..+-+.+-... ..+. +|.|++......-.
T Consensus 79 ~~i-~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~---~~~~G~d~i~~~~~g~t~~~ 154 (223)
T 1y0e_A 79 KEV-DELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKN---AARLGFDYIGTTLHGYTSYT 154 (223)
T ss_dssp HHH-HHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHH---HHHTTCSEEECTTTTSSTTS
T ss_pred HHH-HHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHH---HHHcCCCEEEeCCCcCcCCC
Confidence 345 45578999999876543 22 2444444444443234677777766443322 2222 68988754322111
Q ss_pred CCch-hHHHHHHHHHHHHHHcCCCeEEeeh
Q 012335 260 IPIE-KIFLAQKVMIHKANIQGKPVVTATQ 288 (466)
Q Consensus 260 ~~~e-~v~~~qk~ii~~~~~~gkPvi~ATq 288 (466)
.+.. ..+. ...+-+.+...+.|++...-
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~~~ipvia~GG 183 (223)
T 1y0e_A 155 QGQLLYQND-FQFLKDVLQSVDAKVIAEGN 183 (223)
T ss_dssp TTCCTTHHH-HHHHHHHHHHCCSEEEEESS
T ss_pred CCCCCCccc-HHHHHHHHhhCCCCEEEecC
Confidence 1110 1111 11222233445899987664
No 282
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=29.50 E-value=1.1e+02 Score=30.26 Aligned_cols=68 Identities=16% Similarity=0.047 Sum_probs=42.1
Q ss_pred HHHHhccCcCCCcEEEEcCCC---------------ChhhHHHHHHHHHhcCCCceEEE--eecCHHHHhcHHHHHhcCC
Q 012335 185 EDILNWGVPNKIDMIALSFVR---------------KGSDLVEVRNLLRVHAKNILLMS--KVENLEGVANFDDVLANSD 247 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV~---------------sa~dv~~~r~~l~~~~~~~~Iia--KIE~~~av~nideI~~~sD 247 (466)
++. +.+.+.|+|+|.++.=- +..-+.++.+.... .+++||| -|-+...+ ...+..=+|
T Consensus 173 e~A-~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~g~di--~kAlalGA~ 247 (351)
T 2c6q_A 173 EMV-EELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHG--LKGHIISDGGCSCPGDV--AKAFGAGAD 247 (351)
T ss_dssp HHH-HHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHH--TTCEEEEESCCCSHHHH--HHHHHTTCS
T ss_pred HHH-HHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhh--cCCcEEEeCCCCCHHHH--HHHHHcCCC
Confidence 455 55688999999887411 11223344444332 3588998 67665444 344444489
Q ss_pred eeEEeCCccc
Q 012335 248 AFMVARGDLG 257 (466)
Q Consensus 248 gImiaRgDLg 257 (466)
++++||.=|+
T Consensus 248 ~V~vG~~fl~ 257 (351)
T 2c6q_A 248 FVMLGGMLAG 257 (351)
T ss_dssp EEEESTTTTT
T ss_pred ceeccHHHhc
Confidence 9999997775
No 283
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=29.50 E-value=1e+02 Score=30.67 Aligned_cols=103 Identities=10% Similarity=0.061 Sum_probs=0.0
Q ss_pred CCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHH--hcCCeeEEeCCc
Q 012335 178 TLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVL--ANSDAFMVARGD 255 (466)
Q Consensus 178 ~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~--~~sDgImiaRgD 255 (466)
.++..+...+.+...+.++++|=-|+-.+.+...++++.+.+.|..++|++= | ....+.+.+++ ..+|.|.+ |
T Consensus 211 ~~~~~~ai~~~~~l~~~~i~~iE~P~~~d~~~~~~l~~~l~~~g~~iPIa~d-E-~~~~~~~~~~i~~~~~d~v~i---k 285 (392)
T 3p3b_A 211 AYNLNLTKEVLAALSDVNLYWLEEAFHEDEALYEDLKEWLGQRGQNVLIADG-E-GLASPHLIEWATRGRVDVLQY---D 285 (392)
T ss_dssp CCCHHHHHHHHHHTTTSCEEEEECSSSCCHHHHHHHHHHHHHHTCCCEEEEC-C-SSCCTTHHHHHHTTSCCEECC---B
T ss_pred CCCHHHHHHHHHHHHhcCCCEEecCCcccHHHHHHHHHhhccCCCCccEEec-C-CCCHHHHHHHHHcCCCCEEEe---C
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHh
Q 012335 256 LGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLES 292 (466)
Q Consensus 256 Lg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeS 292 (466)
+.-- |+.+ -.+++..|+++|.++.+. |+||
T Consensus 286 ~~~~-Git~----~~~i~~~A~~~gi~~~~h--~~es 315 (392)
T 3p3b_A 286 IIWP-GFTH----WMELGEKLDAHGLRSAPH--CYGN 315 (392)
T ss_dssp TTTB-CHHH----HHHHHHHHHHTTCEECCB--CCSC
T ss_pred cccc-CHHH----HHHHHHHHHHcCCEEEec--CCCC
No 284
>4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A*
Probab=29.36 E-value=1.1e+02 Score=30.60 Aligned_cols=53 Identities=13% Similarity=0.149 Sum_probs=37.4
Q ss_pred cCCC-CCCHHHHH----HHHHhCCceEEEecCCCCHHHHH-HHHHHHHHHHHHcCCceEE
Q 012335 17 LGPA-SRSVEMAE----KLLRAGMNVARFNFSHGSHAYHQ-ETLDNLRTAMNNTGILCAV 70 (466)
Q Consensus 17 iGp~-~~~~~~l~----~li~~G~~v~RiN~shg~~~~~~-~~i~~ir~~~~~~~~~i~i 70 (466)
+|+- +.++++++ .|-++|+++|=+|.-..+ +... +.++.+.+++++.+..+++
T Consensus 95 lG~Yss~d~~v~~~h~~~Ak~aGIDgf~l~w~~~~-~~~d~~~l~~~l~aA~~~~~k~~f 153 (380)
T 4ad1_A 95 LGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQ-DETEAKRIGLILDAADKKKIKVCF 153 (380)
T ss_dssp TCSCCTTCHHHHHHHHHHHHHHTEEEEEEEECCCC-SHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred cccccCCCHHHHHHHHHHHHHcCCCEEEEEecCCC-CcccHHHHHHHHHHHHHcCCeEEE
Confidence 4664 44666554 499999999999975322 2233 6888899988888887664
No 285
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=29.26 E-value=96 Score=29.54 Aligned_cols=52 Identities=8% Similarity=0.137 Sum_probs=32.8
Q ss_pred CHHHHHHHHHhCCceEEEecCC---------CCH-HHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 012335 23 SVEMAEKLLRAGMNVARFNFSH---------GSH-AYHQETLDNLRTAMNNTGILCAVMLDTKG 76 (466)
Q Consensus 23 ~~~~l~~li~~G~~v~RiN~sh---------g~~-~~~~~~i~~ir~~~~~~~~~i~i~~Dl~G 76 (466)
+.+.++.|-+.|+|++||-+++ +.. ++..+.++.+=+.+.+.| +.+++|+-+
T Consensus 43 ~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G--i~vildlh~ 104 (320)
T 3nco_A 43 EDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKND--LVVIINCHH 104 (320)
T ss_dssp CHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTT--CEEEEECCC
T ss_pred CHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 5889999999999999998753 221 122233333333344555 457788864
No 286
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=29.24 E-value=82 Score=29.66 Aligned_cols=58 Identities=16% Similarity=0.088 Sum_probs=36.3
Q ss_pred eEEEEecC-CCC-CCHHHHHHHHHhCCceEEEecCCCCHHH-HHHHHHHHHHHHHHcCCceEEEe
Q 012335 11 TKIVCTLG-PAS-RSVEMAEKLLRAGMNVARFNFSHGSHAY-HQETLDNLRTAMNNTGILCAVML 72 (466)
Q Consensus 11 tkIi~TiG-p~~-~~~~~l~~li~~G~~v~RiN~shg~~~~-~~~~i~~ir~~~~~~~~~i~i~~ 72 (466)
++...|.| |.- .+.+.++.|.++|+|++=+-.|.|...+ ..++++.+| + ...|+.+|.
T Consensus 8 ~~~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir---~-~~~Pivlm~ 68 (240)
T 1viz_A 8 EWKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVR---R-FLVPCVLEV 68 (240)
T ss_dssp GCCEEEEECTTSCCCHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHT---T-SSSCEEEEC
T ss_pred cceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhh---C-cCCCEEEec
Confidence 34445554 432 5789999999999999999999986543 444554444 4 566766643
No 287
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=29.08 E-value=1.8e+02 Score=22.62 Aligned_cols=62 Identities=13% Similarity=0.156 Sum_probs=34.4
Q ss_pred HHHHHHhcCCcEEEEE----cCCchH-HHHHHhc--CCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcC
Q 012335 342 AVRTANCIKAALILVL----TRGGTT-AKMVSKY--RPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSS 414 (466)
Q Consensus 342 av~~a~~~~a~~Ivv~----T~sG~t-a~~vSk~--RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~ 414 (466)
|.+...+...++|++= ..+|.. .+.+.+. .|.+||++++ . ..........+-.|+.-++..
T Consensus 38 al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s------~------~~~~~~~~~~~~~Ga~~~l~K 105 (122)
T 3gl9_A 38 ALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLT------A------KGGEEDESLALSLGARKVMRK 105 (122)
T ss_dssp HHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEE------S------CCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEe------c------CCchHHHHHHHhcChhhhccC
Confidence 3344455667766653 235543 3344332 3789999992 1 222223334456688888877
Q ss_pred C
Q 012335 415 G 415 (466)
Q Consensus 415 ~ 415 (466)
+
T Consensus 106 P 106 (122)
T 3gl9_A 106 P 106 (122)
T ss_dssp S
T ss_pred C
Confidence 5
No 288
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=28.68 E-value=2.1e+02 Score=22.46 Aligned_cols=62 Identities=13% Similarity=0.094 Sum_probs=36.8
Q ss_pred HHHHHHHhcCCcEEEEEc----CCchH-HHHHHh--cCCCCCEEEEEeccccccccccccCChhh-hhh-hcCccCcEEE
Q 012335 341 SAVRTANCIKAALILVLT----RGGTT-AKMVSK--YRPSMPILSVIVPEIKTDSIVWSCSDEAP-ARH-SLIFRALVPV 411 (466)
Q Consensus 341 ~av~~a~~~~a~~Ivv~T----~sG~t-a~~vSk--~RP~~PIiAv~~~~~~tt~~~w~~~~~~~-aR~-l~L~~GV~P~ 411 (466)
.|.+...+...++|++-. .+|.. .+.+.+ ..|.+||+.+ + ..... ... ..+..|+.-+
T Consensus 41 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~-------s------~~~~~~~~~~~~~~~g~~~~ 107 (140)
T 3grc_A 41 QALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVV-------S------ANAREGELEFNSQPLAVSTW 107 (140)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEE-------C------TTHHHHHHHHCCTTTCCCEE
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEE-------e------cCCChHHHHHHhhhcCCCEE
Confidence 344445566778777643 24443 445555 5689999999 2 22222 222 4566689888
Q ss_pred EcCC
Q 012335 412 LSSG 415 (466)
Q Consensus 412 l~~~ 415 (466)
+..+
T Consensus 108 l~kP 111 (140)
T 3grc_A 108 LEKP 111 (140)
T ss_dssp ECSS
T ss_pred EeCC
Confidence 8765
No 289
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=28.68 E-value=71 Score=30.18 Aligned_cols=61 Identities=11% Similarity=0.071 Sum_probs=44.0
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEe
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVA 252 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImia 252 (466)
+.+.+.|+|+|.+.. +..+++.++-+.+++.|....+.-.=.| .++.+++++...|.|++-
T Consensus 103 ~~~~~aGAd~itvH~-Ea~~~~~~~i~~ir~~G~k~Gvalnp~T--p~e~l~~~l~~vD~VlvM 163 (246)
T 3inp_A 103 ESFAKAGATSIVFHP-EASEHIDRSLQLIKSFGIQAGLALNPAT--GIDCLKYVESNIDRVLIM 163 (246)
T ss_dssp HHHHHHTCSEEEECG-GGCSCHHHHHHHHHTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEEE
T ss_pred HHHHHcCCCEEEEcc-ccchhHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHhcCCEEEEe
Confidence 445789999999975 4445777777778777765555433344 567888999999988764
No 290
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=28.58 E-value=1e+02 Score=28.51 Aligned_cols=113 Identities=9% Similarity=0.047 Sum_probs=68.7
Q ss_pred hccCcCCCcEEEEcCCC----ChhhHHHHHHHHHhcCCCceEEEe------e----------------cCHHHHhcHHHH
Q 012335 189 NWGVPNKIDMIALSFVR----KGSDLVEVRNLLRVHAKNILLMSK------V----------------ENLEGVANFDDV 242 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~----sa~dv~~~r~~l~~~~~~~~IiaK------I----------------E~~~av~nideI 242 (466)
+.+.+.|+|+|-+.+-. +.+++.++++.+.+.|-.+..+.- . +..++++.+...
T Consensus 28 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 107 (290)
T 3tva_A 28 EVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEI 107 (290)
T ss_dssp HHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHH
Confidence 55678999999888643 467799999999987754444321 0 013456666666
Q ss_pred Hhc-----CCeeEEeCCcccCc--CCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh
Q 012335 243 LAN-----SDAFMVARGDLGME--IPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 310 (466)
Q Consensus 243 ~~~-----sDgImiaRgDLg~e--~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na 310 (466)
++. ++.|.+..|...-. -.++.+...-+++...|.++|..+.+=+ + .-|.+++.++...
T Consensus 108 i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~-----~----~~~~~~~~~l~~~ 173 (290)
T 3tva_A 108 SDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLET-----G----QESADHLLEFIED 173 (290)
T ss_dssp HHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEEC-----C----SSCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEec-----C----CCCHHHHHHHHHh
Confidence 665 36777655533211 1234555566778888888887765533 2 1355555555554
No 291
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=28.54 E-value=1.6e+02 Score=27.53 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhcCCCCCEEEE
Q 012335 338 LASSAVRTANCIKAALILVLTRG---------GTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 338 ia~~av~~a~~~~a~~Ivv~T~s---------G~ta~~vSk~RP~~PIiAv 379 (466)
.+...++.|.+.++++||+-++. |+++..+.+.-| |||+.+
T Consensus 99 ~~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv 148 (319)
T 3olq_A 99 PYEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCP-APVWMV 148 (319)
T ss_dssp HHHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCS-SCEEEE
T ss_pred hHHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCC-CCEEEe
Confidence 34455566778899999987753 778888877665 999999
No 292
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=28.50 E-value=62 Score=30.56 Aligned_cols=52 Identities=12% Similarity=0.208 Sum_probs=32.5
Q ss_pred CHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 012335 23 SVEMAEKLLRAGMNVARFNFSHGS--HAYHQETLDNLRTAMNNTGILCAVMLDTKG 76 (466)
Q Consensus 23 ~~~~l~~li~~G~~v~RiN~shg~--~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~G 76 (466)
..+.++.|-+.|+|++|+-++.|. .+...+.++.+=+.+.+.| +.+++|+-+
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~Vild~H~ 86 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNK--MVAVVEVHD 86 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT--CEEEEEECT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 456899999999999999887441 1112233333334444555 456778764
No 293
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=28.41 E-value=1.5e+02 Score=27.34 Aligned_cols=115 Identities=10% Similarity=-0.054 Sum_probs=68.7
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEee------cCHHHHhcHHHHHhc-----CCeeEEeC----
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKV------ENLEGVANFDDVLAN-----SDAFMVAR---- 253 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKI------E~~~av~nideI~~~-----sDgImiaR---- 253 (466)
+.+.+.|+|+|=+..-. . ++.++++.+.+.|-.+..+.-- ...++++.+...++. ++.|.+..
T Consensus 38 ~~~~~~G~~~vEl~~~~-~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~ 115 (301)
T 3cny_A 38 SDIVVAGFQGTEVGGFF-P-GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSEQTYT 115 (301)
T ss_dssp HHHHHHTCCEECCCTTC-C-CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTC
T ss_pred HHHHHhCCCEEEecCCC-C-CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecCCCcc
Confidence 67788999999887432 3 8899999999877433332100 122345556665555 35666653
Q ss_pred --CcccCcC----------CchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh
Q 012335 254 --GDLGMEI----------PIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 310 (466)
Q Consensus 254 --gDLg~e~----------~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na 310 (466)
|...... .++.+...-+++...|.++|..+.+ |-+-.+...|.+++-++...
T Consensus 116 ~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l-----E~~~~~~~~~~~~~~~l~~~ 179 (301)
T 3cny_A 116 IQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAY-----HHHMGTGIQTKEETDRLMAN 179 (301)
T ss_dssp CTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEE-----ECCTTSSSCSHHHHHHHHHT
T ss_pred ccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEE-----ecCCCcccCCHHHHHHHHHh
Confidence 3321111 1234455567888888888876554 33333445677777777665
No 294
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=28.33 E-value=87 Score=28.72 Aligned_cols=84 Identities=15% Similarity=0.096 Sum_probs=51.3
Q ss_pred hccCcCCCcEEEEcCCC-----ChhhHHHHHHHHHhcCCCceEEE--eecCHHHHhcHHHHHhc-CCeeEEeCCcccCcC
Q 012335 189 NWGVPNKIDMIALSFVR-----KGSDLVEVRNLLRVHAKNILLMS--KVENLEGVANFDDVLAN-SDAFMVARGDLGMEI 260 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~-----sa~dv~~~r~~l~~~~~~~~Iia--KIE~~~av~nideI~~~-sDgImiaRgDLg~e~ 260 (466)
+.+.+.|++.|.+.-+. +.-+...++++... .+++++| =|-+ .+++.++.+. +||+++|++=+..+.
T Consensus 158 ~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~--~~ipvia~GGI~~---~~d~~~~~~~Gadgv~vGsal~~~~~ 232 (253)
T 1thf_D 158 VEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL--TTLPIIASGGAGK---MEHFLEAFLAGADAALAASVFHFREI 232 (253)
T ss_dssp HHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGG--CCSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHHTTCS
T ss_pred HHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHh--cCCCEEEECCCCC---HHHHHHHHHcCChHHHHHHHHHcCCC
Confidence 45567899988875332 22356666665433 2567777 2332 3556666665 899999987666554
Q ss_pred CchhHHHHHHHHHHHHHHcCCCeE
Q 012335 261 PIEKIFLAQKVMIHKANIQGKPVV 284 (466)
Q Consensus 261 ~~e~v~~~qk~ii~~~~~~gkPvi 284 (466)
.++ +.++.+++.|.||=
T Consensus 233 ~~~-------~~~~~l~~~g~~~~ 249 (253)
T 1thf_D 233 DVR-------ELKEYLKKHGVNVR 249 (253)
T ss_dssp CHH-------HHHHHHHHTTCCCC
T ss_pred CHH-------HHHHHHHHcCCccc
Confidence 433 33445677787764
No 295
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=28.18 E-value=68 Score=30.27 Aligned_cols=66 Identities=12% Similarity=0.216 Sum_probs=0.0
Q ss_pred hcHHHHHhccCcCCCcEEEE------cCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc---CCeeEEe
Q 012335 182 KDKEDILNWGVPNKIDMIAL------SFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN---SDAFMVA 252 (466)
Q Consensus 182 ~D~~di~~~~~~~~~d~v~~------sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~---sDgImia 252 (466)
++.+.+ ..+.+.|+|+|.+ .|--+.+...++.+.+...+.++.++| |+ |+.+.+++... +||++||
T Consensus 162 ~~~~E~-~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIA--eg--GI~s~~dv~~l~~Ga~gvlVG 236 (254)
T 1vc4_A 162 HTEREL-EIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVA--ES--GYSRKEELKALEGLFDAVLIG 236 (254)
T ss_dssp CSHHHH-HHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEE--ES--CCCSHHHHHTTTTTCSEEEEC
T ss_pred CCHHHH-HHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEE--Ec--CCCCHHHHHHHHcCCCEEEEe
No 296
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=28.10 E-value=35 Score=32.85 Aligned_cols=35 Identities=29% Similarity=0.390 Sum_probs=27.8
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCC
Q 012335 10 KTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHG 45 (466)
Q Consensus 10 ~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg 45 (466)
+-+=++++-|.. +.+.|++|.+.|+..+|+|+..+
T Consensus 96 r~~Gva~vdp~~-~~~eL~~l~~~G~rGvR~~~~~~ 130 (303)
T 4d9a_A 96 KARGIAVVDPAI-DEAELAALHEGGMRGIRFNFLKR 130 (303)
T ss_dssp SEEEEECCCTTC-CHHHHHHHHHTTEEEEEEECCTT
T ss_pred cEEEEEEeCCCC-CHHHHHHHHHCCCCEEEeecccC
Confidence 344556787755 57899999999999999999754
No 297
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=27.88 E-value=1.2e+02 Score=28.41 Aligned_cols=110 Identities=12% Similarity=0.109 Sum_probs=58.8
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeC---CcccCcCCchhH
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVAR---GDLGMEIPIEKI 265 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaR---gDLg~e~~~e~v 265 (466)
+.+.+.|+|++.++-.. .+++.++.+.+.+.|-+ ++.-+.-....+.+.+|.+.+++.+..- |--|..-+.+ .
T Consensus 116 ~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~gl~--~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~-~ 191 (262)
T 2ekc_A 116 RLSREKGIDGFIVPDLP-PEEAEELKAVMKKYVLS--FVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKLP-Y 191 (262)
T ss_dssp HHHHHTTCCEEECTTCC-HHHHHHHHHHHHHTTCE--ECCEECTTCCHHHHHHHHHHCSSCEEEESSCC----------C
T ss_pred HHHHHcCCCEEEECCCC-HHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCCcC-c
Confidence 44567899999998543 46777888888776633 2333332234467889998887654321 1222222221 0
Q ss_pred HHHHHHHHHHHHHc-CCCeEEeehhhHhhhcCCCCCHHHHHhHHHhhh
Q 012335 266 FLAQKVMIHKANIQ-GKPVVTATQMLESMIKSPRPTRAEATDVANAAE 312 (466)
Q Consensus 266 ~~~qk~ii~~~~~~-gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naaE 312 (466)
.-....++..+++ +.|+++..- .-|...+..+...|.
T Consensus 192 -~~~~~~v~~vr~~~~~pv~vG~G---------I~t~e~~~~~~~gAD 229 (262)
T 2ekc_A 192 -ERIKKKVEEYRELCDKPVVVGFG---------VSKKEHAREIGSFAD 229 (262)
T ss_dssp -HHHHHHHHHHHHHCCSCEEEESS---------CCSHHHHHHHHTTSS
T ss_pred -ccHHHHHHHHHhhcCCCEEEeCC---------CCCHHHHHHHHcCCC
Confidence 1122344455443 789887654 444555555443333
No 298
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=27.83 E-value=3.8e+02 Score=28.50 Aligned_cols=235 Identities=15% Similarity=0.195 Sum_probs=126.1
Q ss_pred cEEeecchhhhhccCCCCEEEE--eCCeEEEEEEEEecCCCeEEEEEeeCeEecCCCccccCCcc---------------
Q 012335 111 KMISMSYKKLAEDLRPGSVILC--SDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVI--------------- 173 (466)
Q Consensus 111 ~~i~v~~~~~~~~v~~Gd~i~i--ddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~Kgvnlp~~~--------------- 173 (466)
+.|++|.-.+--. ..-+ +++.+..+|.. +..+. .+-|.--++..+++|-..
T Consensus 120 ~~ilidDG~i~l~-----V~~~~~~~~~i~~~v~~----gg~l~---~~KgvnlPg~~~~lp~ltekD~~di~~~l~~g~ 187 (587)
T 2e28_A 120 AKILLDDGLISLE-----VNAVDKQAGEIVTTVLN----GGVLK---NKKGVNVPGVKVNLPGITEKDRADILFGIRQGI 187 (587)
T ss_dssp CEEEETTTTEEEE-----EEEEETTTTEEEEECCS----CCCBC---SSCBEECTTSCCCCCSCCHHHHHHHHHHHHHTC
T ss_pred CEEEEeCCEEEEE-----EEEEecCCCeEEEEEec----CCEEc---CCceeecCCCcCCCCCCCcccHHHHHHHHHcCC
Confidence 5677765333111 1223 45667666641 22222 233555667777777542
Q ss_pred --cCCCC-CChhcHHHHHhccCcCCC-cEEEEcCCCChhhHHHHHHHHHhc-----------------------------
Q 012335 174 --VDLPT-LTEKDKEDILNWGVPNKI-DMIALSFVRKGSDLVEVRNLLRVH----------------------------- 220 (466)
Q Consensus 174 --~~lp~-lte~D~~di~~~~~~~~~-d~v~~sfV~sa~dv~~~r~~l~~~----------------------------- 220 (466)
+-+|. =+..|.+.+.++..+.|. +...++.+++++-++.+.+++...
T Consensus 188 d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~DgImVargDLgvei~~~~v~~~qk~ii~~ 267 (587)
T 2e28_A 188 DFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKK 267 (587)
T ss_dssp SEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCEEEEcCchhhhhcCHHHHHHHHHHHHHH
Confidence 11232 277888887555555664 678899999999998887766411
Q ss_pred -C--CCceEEE------eecC-----HHHHhcHHHHHhcCCeeEE----eCCcccCcCCchhHHHHHHHHHHHHHHcCCC
Q 012335 221 -A--KNILLMS------KVEN-----LEGVANFDDVLANSDAFMV----ARGDLGMEIPIEKIFLAQKVMIHKANIQGKP 282 (466)
Q Consensus 221 -~--~~~~Iia------KIE~-----~~av~nideI~~~sDgImi----aRgDLg~e~~~e~v~~~qk~ii~~~~~~gkP 282 (466)
+ ..+.++| +|++ ++.-+=...|+.-+|++|+ |.|++ |.| -...+.+|+..+.+.- +
T Consensus 268 ~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~y----Pve-aV~~m~~I~~~~E~~~-~ 341 (587)
T 2e28_A 268 SNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQY----PVE-AVKTMHQIALRTEQAL-E 341 (587)
T ss_dssp HHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HHH-HHHHHHHHHHHHHTTC-C
T ss_pred HHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccCCCC----HHH-HHHHHHHHHHHHhhhh-h
Confidence 0 1233444 5555 3555556778888999998 55554 333 3345566666665531 1
Q ss_pred eEEeehhhHhhhcCCCCCHHHHHhHHHhh-hhhccchhhHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCc
Q 012335 283 VVTATQMLESMIKSPRPTRAEATDVANAA-ENFINYGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGG 361 (466)
Q Consensus 283 vi~ATqmLeSM~~~p~PTRAEvsDv~naa-E~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG 361 (466)
.-+.++.......++.+|. ++.+| +.+..... .-+..... -...|..+|+.-...-|+++|++-
T Consensus 342 ---~~~~~~~~~~~~~~~~~~a--ia~aa~~~a~~~~a--~aIv~~T~--------sG~ta~~isr~Rp~~pI~a~t~~~ 406 (587)
T 2e28_A 342 ---HRDILSQRTKESQTTITDA--IGQSVAHTALNLDV--AAIVTPTV--------SGKTPQMVAKYRPKAPIIAVTSNE 406 (587)
T ss_dssp ---HHHHHHHHHTTCCCCHHHH--HHHHHHHHHHHTTC--SEEEEECS--------SSHHHHHHHHTCCSSCEEEEESSH
T ss_pred ---hhhHhhhhhcccccchHHH--HHHHHHHHHHhCCC--CEEEEECC--------CcHHHHHHHhcCCCCCEEEECCCH
Confidence 0022332222211333332 44442 22211000 00000000 023445556655556699999999
Q ss_pred hHHHHHHhcCCCCCEEE
Q 012335 362 TTAKMVSKYRPSMPILS 378 (466)
Q Consensus 362 ~ta~~vSk~RP~~PIiA 378 (466)
.++|.++=||--.|++.
T Consensus 407 ~~~r~l~l~~GV~p~~~ 423 (587)
T 2e28_A 407 AVSRRLALVWGVYTKEA 423 (587)
T ss_dssp HHHHHGGGSTTEEEEEC
T ss_pred HHHHHHHHhcCceEEec
Confidence 99999988887666654
No 299
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=27.74 E-value=86 Score=31.46 Aligned_cols=70 Identities=17% Similarity=0.159 Sum_probs=41.7
Q ss_pred HHHHHhccCcCCCcEEEEcC-------------CC--ChhhHHHHHHHHHhcCCCceEEE--eecCHHHHhcHHHHHhcC
Q 012335 184 KEDILNWGVPNKIDMIALSF-------------VR--KGSDLVEVRNLLRVHAKNILLMS--KVENLEGVANFDDVLANS 246 (466)
Q Consensus 184 ~~di~~~~~~~~~d~v~~sf-------------V~--sa~dv~~~r~~l~~~~~~~~Iia--KIE~~~av~nideI~~~s 246 (466)
.+++ +.+.+.|+|+|.++. .. ..+-+.++++.+.. .+++||| -|-+.+-+..+ +..=+
T Consensus 205 ~~~a-~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~--~~ipVia~GGI~~~~d~~~a--la~GA 279 (404)
T 1eep_A 205 KEAA-LDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNN--TNICIIADGGIRFSGDVVKA--IAAGA 279 (404)
T ss_dssp HHHH-HHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTT--SSCEEEEESCCCSHHHHHHH--HHHTC
T ss_pred HHHH-HHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhh--cCceEEEECCCCCHHHHHHH--HHcCC
Confidence 3455 556789999999932 21 12223334443322 3688998 77776544322 22238
Q ss_pred CeeEEeCCcccC
Q 012335 247 DAFMVARGDLGM 258 (466)
Q Consensus 247 DgImiaRgDLg~ 258 (466)
|++++||+=|+.
T Consensus 280 d~V~iG~~~l~~ 291 (404)
T 1eep_A 280 DSVMIGNLFAGT 291 (404)
T ss_dssp SEEEECHHHHTB
T ss_pred CHHhhCHHHhcC
Confidence 999999976554
No 300
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=27.58 E-value=1.8e+02 Score=25.38 Aligned_cols=58 Identities=12% Similarity=0.197 Sum_probs=39.2
Q ss_pred EEecCCCEEEEEeC----CCCCCCccEEeecchhhhhc---cCCCCEEEEeCCeEEEEEEEEecCCCeE
Q 012335 90 IQLVQGQEITISTD----YSLKGDEKMISMSYKKLAED---LRPGSVILCSDGTISLTVLDCAKELGLV 151 (466)
Q Consensus 90 i~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~~---v~~Gd~i~iddG~i~l~V~~v~~~~~~i 151 (466)
.-.+.|++.+|+.. |...+.+....++-..|... +++|+.+.+++ . ...|++++ ++.+
T Consensus 62 ~gm~~Ge~~~v~Ipp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~~-~-~~~V~~v~--~~~V 126 (157)
T 3pr9_A 62 LEMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSIN--SGRV 126 (157)
T ss_dssp HHCCTTCEEEEEECGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEETT-E-EEEEEEEE--TTEE
T ss_pred cCCCCCCEEEEEECcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEecC-C-CeEEEEEc--CCEE
Confidence 34678999998865 33344556667777777752 56799999864 3 46788885 4444
No 301
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=27.55 E-value=80 Score=28.38 Aligned_cols=51 Identities=24% Similarity=0.214 Sum_probs=36.6
Q ss_pred CHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHH-------HcCCCeEEee
Q 012335 232 NLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKAN-------IQGKPVVTAT 287 (466)
Q Consensus 232 ~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~-------~~gkPvi~AT 287 (466)
.++.+..+.+-+..+||++|+--..--. +|-+-|..+.-+. -.||||.+.+
T Consensus 54 ~p~~~~~l~~~i~~aD~~ii~tPeYn~s-----~pg~LKn~iDwlsr~~~~~~~~gKpv~~v~ 111 (190)
T 3u7r_A 54 APESVLRLKDRIEHSDAVLAITPEYNRS-----YPGMIKNAIDWATRPYGQNSWKGKPAAVIG 111 (190)
T ss_dssp CCHHHHHHHHHHHTSSEEEEECCCBTTB-----CCHHHHHHHHHHHCSTTCCTTTTCEEEEEE
T ss_pred CCHHHHHHHHHHHhCCcEEEechhhccc-----CCHHHHHHHHHhcccccCCccCCCEEEEEE
Confidence 4677888888899999999985444443 4457777777663 3689987653
No 302
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=27.54 E-value=26 Score=35.29 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=29.2
Q ss_pred HhcCCcEEEEEcCCchHHHHHHhc----CCCCCEEEE
Q 012335 347 NCIKAALILVLTRGGTTAKMVSKY----RPSMPILSV 379 (466)
Q Consensus 347 ~~~~a~~Ivv~T~sG~ta~~vSk~----RP~~PIiAv 379 (466)
.+..|+.++|-|.||+||..+|.= .|..+.+.+
T Consensus 243 ~~~~aDGlIVSTPTGSTAYslSAGGPIv~P~~~~i~l 279 (365)
T 3pfn_A 243 TTVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMI 279 (365)
T ss_dssp EEECSSEEEEECGGGGGTHHHHTTCCEECTTSCCEEE
T ss_pred EEEecCeEEEeCCccHHHHHHhCCCCccCCCCCeEEE
Confidence 356899999999999999999984 888888888
No 303
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=27.49 E-value=2.3e+02 Score=26.06 Aligned_cols=89 Identities=10% Similarity=0.109 Sum_probs=54.8
Q ss_pred ChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-CCeeEEeCCcccC
Q 012335 180 TEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-SDAFMVARGDLGM 258 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-sDgImiaRgDLg~ 258 (466)
+..+...+.+.+++.|++.|-+.+ ++....+.++++..+.. +..+-+-. .---+..+.-+++ +|+++.+-.|
T Consensus 27 ~~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~~-~l~vgaGt--vl~~d~~~~A~~aGAd~v~~p~~d--- 99 (224)
T 1vhc_A 27 NADDILPLADTLAKNGLSVAEITF-RSEAAADAIRLLRANRP-DFLIAAGT--VLTAEQVVLAKSSGADFVVTPGLN--- 99 (224)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHCT-TCEEEEES--CCSHHHHHHHHHHTCSEEECSSCC---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhCc-CcEEeeCc--EeeHHHHHHHHHCCCCEEEECCCC---
Confidence 334444443677889999999996 56666666666555442 34444432 1112344444444 7999765333
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 259 EIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 259 e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
..+++.|+++|+|++..
T Consensus 100 -----------~~v~~~ar~~g~~~i~G 116 (224)
T 1vhc_A 100 -----------PKIVKLCQDLNFPITPG 116 (224)
T ss_dssp -----------HHHHHHHHHTTCCEECE
T ss_pred -----------HHHHHHHHHhCCCEEec
Confidence 45678999999998853
No 304
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=27.41 E-value=1.1e+02 Score=30.72 Aligned_cols=62 Identities=16% Similarity=0.168 Sum_probs=41.5
Q ss_pred CeEEEEecCCCCC-CHH----HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 10 KTKIVCTLGPASR-SVE----MAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 10 ~tkIi~TiGp~~~-~~~----~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
+....+|+|.... +++ ..+++.++|.+.+.+...|++.+.-.+.++.+|++. |..+.|++|.
T Consensus 161 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~av---G~d~~l~vDa 227 (398)
T 2pp0_A 161 SVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREAL---GDEFPLMVDA 227 (398)
T ss_dssp EEEEEECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHH---CSSSCEEEEC
T ss_pred CeeEEEecCCcCCCCHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHc---CCCCeEEEEC
Confidence 4556677654312 454 455678899999999999888777777777777654 3334455554
No 305
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=27.40 E-value=7.4e+02 Score=28.29 Aligned_cols=122 Identities=16% Similarity=0.085 Sum_probs=80.3
Q ss_pred HHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCC-------------------------------CceEEEeecCH
Q 012335 185 EDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAK-------------------------------NILLMSKVENL 233 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~-------------------------------~~~IiaKIE~~ 233 (466)
+++.+.|.+.|.+.|++.=-.+-..+.++.+.....|- ...++.--+|.
T Consensus 135 ~eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~hlvlLAkN~ 214 (1041)
T 3f2b_A 135 TKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYNETHRRLGSGSGPFHVTLLAQNE 214 (1041)
T ss_dssp HHHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC------------------CEEEEEEECSH
T ss_pred HHHHHHHHHCCCCEEEEecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccccccccccccCCCceEEEEeCCH
Confidence 34447889999999999987777777766655433220 01344444689
Q ss_pred HHHhcHHHHHhc--------------------CCeeEEeCCcccCcCC-------------------------c------
Q 012335 234 EGVANFDDVLAN--------------------SDAFMVARGDLGMEIP-------------------------I------ 262 (466)
Q Consensus 234 ~av~nideI~~~--------------------sDgImiaRgDLg~e~~-------------------------~------ 262 (466)
+|..||-.+++. ++|+++.-|-+.-+++ .
T Consensus 215 ~Gy~nL~kLvS~a~~~~~~~~pri~~~~L~~~~egLi~~s~c~~Gev~~~l~~~~~~~a~~~~~~y~ylei~~~~~~~~l 294 (1041)
T 3f2b_A 215 TGLKNLFKLVSLSHIQYFHRVPRIPRSVLVKHRDGLLVGSGCDKGELFDNLIQKAPEEVEDIARFYDFLEVHPPDVYKPL 294 (1041)
T ss_dssp HHHHHHHHHHHHHHTTTCSSSCCEEHHHHHHTCTTEEEECCSSSSSSTTC--------CCTTGGGCSBEEECCGGGGCCC
T ss_pred HHHHHHHHHHHHHHHhcccCCCCcCHHHHHhccCCeEEEcCccccHHHHHHhcCCHHHHHHHHHHhhHHHhcCccccHHH
Confidence 999999888764 3678887654432221 0
Q ss_pred ---------hhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHhh
Q 012335 263 ---------EKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAA 311 (466)
Q Consensus 263 ---------e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naa 311 (466)
++...+.+++++.+++.|+|++ ||+=. +-..|.+++.-||-.++
T Consensus 295 ~~~~~~~~~~~~~~~~~~l~~la~~~~~p~V-AT~dv----hy~~~ed~~~~dvL~~~ 347 (1041)
T 3f2b_A 295 IEMDYVKDEEMIKNIIRSIVALGEKLDIPVV-ATGNV----HYLNPEDKIYRKILIHS 347 (1041)
T ss_dssp ----CCSCHHHHHHHHHHHHHHHHHTTCCEE-ECCCB----SBSSGGGHHHHHHHHHT
T ss_pred HhccCCCcHHHHHHHHHHHHHHHHHcCCCEE-EeCCc----eecCHhhHHHHHHHHhh
Confidence 1122455789999999999976 56211 12278899999988773
No 306
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=27.32 E-value=58 Score=30.18 Aligned_cols=82 Identities=15% Similarity=0.158 Sum_probs=53.3
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceE-EEeecCHHHHhcHHHHHh-cCCeeEEeCCcccCcCCchhHH
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILL-MSKVENLEGVANFDDVLA-NSDAFMVARGDLGMEIPIEKIF 266 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~I-iaKIE~~~av~nideI~~-~sDgImiaRgDLg~e~~~e~v~ 266 (466)
+.+.+.|+|++.+|= ..++++..+|+.++ . ..+ ..=|= +++ .+..+.++ -+|.++|||+=+..+=|.+..-
T Consensus 129 ~~a~~~g~~GvV~sa-t~p~e~~~ir~~~~---~-~~~vtPGI~-~~g-~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~ 201 (222)
T 4dbe_A 129 NVIREISPKGIVVGG-TKLDHITQYRRDFE---K-MTIVSPGMG-SQG-GSYGDAVCAGADYEIIGRSIYNAGNPLTALR 201 (222)
T ss_dssp HHHHHHCCSEEEECT-TCHHHHHHHHHHCT---T-CEEEECCBS-TTS-BCTTHHHHHTCSEEEECHHHHTSSSHHHHHH
T ss_pred HHHHHhCCCEEEECC-CCHHHHHHHHHhCC---C-CEEEcCCcc-cCc-cCHHHHHHcCCCEEEECHHhcCCCCHHHHHH
Confidence 667789999987763 33578888888764 2 333 33352 222 14544444 4999999999999888877666
Q ss_pred HHHHHHHHHHH
Q 012335 267 LAQKVMIHKAN 277 (466)
Q Consensus 267 ~~qk~ii~~~~ 277 (466)
.+++.|-...+
T Consensus 202 ~i~~~i~~~~~ 212 (222)
T 4dbe_A 202 TINKIIEDKVM 212 (222)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66665544433
No 307
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=27.31 E-value=1e+02 Score=29.85 Aligned_cols=41 Identities=12% Similarity=0.207 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHhCC--------------------ceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 012335 22 RSVEMAEKLLRAGM--------------------NVARFNFSHGSHAYHQETLDNLRTAMNN 63 (466)
Q Consensus 22 ~~~~~l~~li~~G~--------------------~v~RiN~shg~~~~~~~~i~~ir~~~~~ 63 (466)
...+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.++
T Consensus 352 ~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~ 412 (417)
T 3g7q_A 352 TTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEEIER 412 (417)
T ss_dssp CHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 34566677777775 357999998 999999999999887654
No 308
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=27.18 E-value=1.1e+02 Score=29.98 Aligned_cols=58 Identities=26% Similarity=0.217 Sum_probs=43.5
Q ss_pred HhcHHHHHhcC--CeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCC-CCCHHHHHhHHHhhh
Q 012335 236 VANFDDVLANS--DAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSP-RPTRAEATDVANAAE 312 (466)
Q Consensus 236 v~nideI~~~s--DgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p-~PTRAEvsDv~naaE 312 (466)
..+++++++.. |.|+|+ .|. .....++.+|-++||+|++ ++| ..|.+|+..+..+++
T Consensus 57 ~~~~~~ll~~~~vD~V~i~-------tp~----~~H~~~~~~al~aGkhVl~---------EKPla~~~~e~~~l~~~a~ 116 (359)
T 3m2t_A 57 LDNVPAMLNQVPLDAVVMA-------GPP----QLHFEMGLLAMSKGVNVFV---------EKPPCATLEELETLIDAAR 116 (359)
T ss_dssp ESSHHHHHHHSCCSEEEEC-------SCH----HHHHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCCEEEEc-------CCc----HHHHHHHHHHHHCCCeEEE---------ECCCcCCHHHHHHHHHHHH
Confidence 46788998854 999996 343 3445777789999999986 344 568889998888866
Q ss_pred h
Q 012335 313 N 313 (466)
Q Consensus 313 ~ 313 (466)
+
T Consensus 117 ~ 117 (359)
T 3m2t_A 117 R 117 (359)
T ss_dssp H
T ss_pred H
Confidence 5
No 309
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=27.17 E-value=2.8e+02 Score=26.67 Aligned_cols=59 Identities=14% Similarity=0.080 Sum_probs=32.1
Q ss_pred CCCcEEEEcCCC-------Ch-------hhHHHHHHHHHhc----CCCceEEEeecCHHHHhcHHHHHhc-----CCeeE
Q 012335 194 NKIDMIALSFVR-------KG-------SDLVEVRNLLRVH----AKNILLMSKVENLEGVANFDDVLAN-----SDAFM 250 (466)
Q Consensus 194 ~~~d~v~~sfV~-------sa-------~dv~~~r~~l~~~----~~~~~IiaKIE~~~av~nideI~~~-----sDgIm 250 (466)
.|+|+|-+.|-. .. +.++.+|+...+. |.+.+|+.||=.--..+++.++++. +|+|.
T Consensus 164 ~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 164 AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 489999887621 11 3444455544221 4578999998321111233333332 69999
Q ss_pred Ee
Q 012335 251 VA 252 (466)
Q Consensus 251 ia 252 (466)
+.
T Consensus 244 vs 245 (336)
T 1f76_A 244 AT 245 (336)
T ss_dssp EC
T ss_pred Ee
Confidence 85
No 310
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=27.15 E-value=83 Score=30.21 Aligned_cols=22 Identities=23% Similarity=0.372 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHhCCceEEEecC
Q 012335 22 RSVEMAEKLLRAGMNVARFNFS 43 (466)
Q Consensus 22 ~~~~~l~~li~~G~~v~RiN~s 43 (466)
.+.+.++.|-+.|+|++||-++
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~ 50 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFD 50 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCC
Confidence 3578899999999999999876
No 311
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=27.13 E-value=1e+02 Score=29.43 Aligned_cols=93 Identities=11% Similarity=0.099 Sum_probs=55.3
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCC-ceEEEeecCHHHHhcHHHHHhcCCeeEEe---CCcccCcCCchh
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKN-ILLMSKVENLEGVANFDDVLANSDAFMVA---RGDLGMEIPIEK 264 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~-~~IiaKIE~~~av~nideI~~~sDgImia---RgDLg~e~~~e~ 264 (466)
+.+.+.|+|++.++-.- .++..++++.+.+.|-+ +.+++ =.+ ..+.+..|++.++|.+-. .|--|..- .
T Consensus 117 ~~~~~aGvdgvii~Dlp-~ee~~~~~~~~~~~gl~~i~lia-P~t--~~eri~~i~~~~~gfvY~vS~~GvTG~~~---~ 189 (267)
T 3vnd_A 117 TKAQAAGVDSVLIADVP-VEESAPFSKAAKAHGIAPIFIAP-PNA--DADTLKMVSEQGEGYTYLLSRAGVTGTES---K 189 (267)
T ss_dssp HHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEECEEC-TTC--CHHHHHHHHHHCCSCEEESCCCCCC--------
T ss_pred HHHHHcCCCEEEeCCCC-HhhHHHHHHHHHHcCCeEEEEEC-CCC--CHHHHHHHHHhCCCcEEEEecCCCCCCcc---C
Confidence 34467899999998654 46788888888887743 33332 122 357899999999865433 12222221 2
Q ss_pred HHHHHHHHHHHHHHc-CCCeEEeeh
Q 012335 265 IFLAQKVMIHKANIQ-GKPVVTATQ 288 (466)
Q Consensus 265 v~~~qk~ii~~~~~~-gkPvi~ATq 288 (466)
++.-....++.++++ ..|+++..-
T Consensus 190 ~~~~~~~~v~~vr~~~~~pv~vGfG 214 (267)
T 3vnd_A 190 AGEPIENILTQLAEFNAPPPLLGFG 214 (267)
T ss_dssp ---CHHHHHHHHHTTTCCCEEECSS
T ss_pred CcHHHHHHHHHHHHhcCCCEEEECC
Confidence 333345566666664 679998654
No 312
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=27.08 E-value=2e+02 Score=28.47 Aligned_cols=101 Identities=16% Similarity=0.125 Sum_probs=0.0
Q ss_pred CCChhcHHHHHhccCcCCCcEEEEcCCC-ChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHH--hcCCeeEEeCC
Q 012335 178 TLTEKDKEDILNWGVPNKIDMIALSFVR-KGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVL--ANSDAFMVARG 254 (466)
Q Consensus 178 ~lte~D~~di~~~~~~~~~d~v~~sfV~-sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~--~~sDgImiaRg 254 (466)
.++..+...+.+...+.|+++|=-|+-. +.+...++++.+ .++|.+= |+......+.+++ ..+|.|++..+
T Consensus 204 ~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~-----~iPIa~d-E~~~~~~~~~~~i~~~~~d~v~~k~~ 277 (383)
T 3i4k_A 204 RWDRRTALHYLPILAEAGVELFEQPTPADDLETLREITRRT-----NVSVMAD-ESVWTPAEALAVVKAQAADVIALKTT 277 (383)
T ss_dssp CSCHHHHHHHHHHHHHTTCCEEESCSCTTCHHHHHHHHHHH-----CCEEEES-TTCSSHHHHHHHHHHTCCSEEEECTT
T ss_pred CCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhhC-----CCCEEec-CccCCHHHHHHHHHcCCCCEEEEccc
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHh
Q 012335 255 DLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLES 292 (466)
Q Consensus 255 DLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeS 292 (466)
-+|- ..--.+|...|+++|.|+.+ ..|+||
T Consensus 278 ~~GG-------it~~~~ia~~A~~~gi~~~~-~~~~es 307 (383)
T 3i4k_A 278 KHGG-------LLESKKIAAIAEAGGLACHG-ATSLEG 307 (383)
T ss_dssp TTTS-------HHHHHHHHHHHHHTTCEEEE-CCSCCC
T ss_pred ccCC-------HHHHHHHHHHHHHcCCeEEe-CCCCcc
No 313
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=27.08 E-value=69 Score=30.53 Aligned_cols=54 Identities=22% Similarity=0.124 Sum_probs=35.7
Q ss_pred CCCHHHHHHHH-HhCCceEEEecCCCC-----HHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 012335 21 SRSVEMAEKLL-RAGMNVARFNFSHGS-----HAYHQETLDNLRTAMNNTGILCAVMLDTKG 76 (466)
Q Consensus 21 ~~~~~~l~~li-~~G~~v~RiN~shg~-----~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~G 76 (466)
..+.+.++.|. +.|+|++|+-+.+.. .++..+.++.+=+.+.+.|. .+++|+-+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi--~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLDI--YVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTTHHHHHHHHHHHHHHHTC--EEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHHHHHHHHHHHHHHHHCCC--EEEEEecc
Confidence 45678899998 679999999886521 12234455555555666774 56778764
No 314
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=27.05 E-value=85 Score=30.44 Aligned_cols=83 Identities=16% Similarity=0.100 Sum_probs=57.5
Q ss_pred CcCCCcEEEEcCCCC--------------hhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCccc
Q 012335 192 VPNKIDMIALSFVRK--------------GSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLG 257 (466)
Q Consensus 192 ~~~~~d~v~~sfV~s--------------a~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg 257 (466)
.+.++.+|+-++.+. .+-++.++++..+. .+.+++-+-+++.++- +.+..|.+-|+-+++-
T Consensus 48 ~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~--Glp~~Tev~d~~~v~~---l~~~vd~lqIgA~~~~ 122 (285)
T 3sz8_A 48 RKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARF--GVPVITDVHEAEQAAP---VAEIADVLQVPAFLAR 122 (285)
T ss_dssp HHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHH--CCCEEEECCSGGGHHH---HHTTCSEEEECGGGTT
T ss_pred HhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHH---HHHhCCEEEECccccC
Confidence 345577777653331 35677788887665 4888998877776654 4556999999976663
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
..+ +++++.+.||||++.|.|.
T Consensus 123 ------n~~-----LLr~va~~gkPVilK~G~~ 144 (285)
T 3sz8_A 123 ------QTD-----LVVAIAKAGKPVNVKKPQF 144 (285)
T ss_dssp ------CHH-----HHHHHHHTSSCEEEECCTT
T ss_pred ------CHH-----HHHHHHccCCcEEEeCCCC
Confidence 222 6666668999999998774
No 315
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=26.90 E-value=86 Score=30.68 Aligned_cols=96 Identities=9% Similarity=-0.027 Sum_probs=0.0
Q ss_pred cHHHHHhccCcCCCcEEEEc----------------------CCCChhhHHHHHHHHHhcCCCceEEE--eecCHHHHhc
Q 012335 183 DKEDILNWGVPNKIDMIALS----------------------FVRKGSDLVEVRNLLRVHAKNILLMS--KVENLEGVAN 238 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~s----------------------fV~sa~dv~~~r~~l~~~~~~~~Iia--KIE~~~av~n 238 (466)
+.+++ +.+.+.|+|+|.+| .-........++++.... .++.||+ -|-+.+-+
T Consensus 191 ~~~~a-~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~-~~ipvia~GGI~~~~d~-- 266 (349)
T 1p0k_A 191 SKASA-GKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF-PASTMIASGGLQDALDV-- 266 (349)
T ss_dssp CHHHH-HHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHH--
T ss_pred CHHHH-HHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc-CCCeEEEECCCCCHHHH--
Q ss_pred HHHHHhcCCeeEEeCCcccCcC--Cc----hhHHHHHHHHHHHHHHcCCC
Q 012335 239 FDDVLANSDAFMVARGDLGMEI--PI----EKIFLAQKVMIHKANIQGKP 282 (466)
Q Consensus 239 ideI~~~sDgImiaRgDLg~e~--~~----e~v~~~qk~ii~~~~~~gkP 282 (466)
.+.|..-+|+++|||.=|-... +. +.+..+.+.+-..+...|..
T Consensus 267 ~k~l~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~l~~~m~~~G~~ 316 (349)
T 1p0k_A 267 AKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGAR 316 (349)
T ss_dssp HHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCC
No 316
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=26.77 E-value=61 Score=29.73 Aligned_cols=72 Identities=8% Similarity=0.102 Sum_probs=46.2
Q ss_pred hccCcCCCcEEEEcCCC-----ChhhHHHHHHHHHhcCCCceEEE--eecCHHHHhcHHHHHhc-------CCeeEEeCC
Q 012335 189 NWGVPNKIDMIALSFVR-----KGSDLVEVRNLLRVHAKNILLMS--KVENLEGVANFDDVLAN-------SDAFMVARG 254 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~-----sa~dv~~~r~~l~~~~~~~~Iia--KIE~~~av~nideI~~~-------sDgImiaRg 254 (466)
+.+.+.|+++|.+.-+. +.-|+..++++.... ++++|| -|-+ .+++.++.+. +||++||++
T Consensus 151 ~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~--~iPvia~GGI~~---~~d~~~~~~~~~~~~G~adgv~vgsa 225 (241)
T 1qo2_A 151 KRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIEA--EVKVLAAGGISS---ENSLKTAQKVHTETNGLLKGVIVGRA 225 (241)
T ss_dssp HHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHHH--TCEEEEESSCCS---HHHHHHHHHHHHHTTTSEEEEEECHH
T ss_pred HHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHhc--CCcEEEECCCCC---HHHHHHHHhcccccCCeEeEEEeeHH
Confidence 34567999988875432 122455555554432 577777 2333 3456666655 899999998
Q ss_pred cccCcCCchhH
Q 012335 255 DLGMEIPIEKI 265 (466)
Q Consensus 255 DLg~e~~~e~v 265 (466)
=+..+++++++
T Consensus 226 l~~~~~~~~~~ 236 (241)
T 1qo2_A 226 FLEGILTVEVM 236 (241)
T ss_dssp HHTTSSCHHHH
T ss_pred HHcCCCCHHHH
Confidence 88777777654
No 317
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=26.74 E-value=92 Score=30.45 Aligned_cols=86 Identities=16% Similarity=0.177 Sum_probs=0.0
Q ss_pred ccccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEc---------CCCChhhHHHHHHHHHhcCCCceEEEeecCHHHH
Q 012335 166 NVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALS---------FVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGV 236 (466)
Q Consensus 166 gvnlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~s---------fV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av 236 (466)
+|-+...+..-..++..|...+.+...+.|+|+|.++ ....+.++..++.+-... +++|++ .......
T Consensus 213 ~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~-~Ggi~s~ 289 (338)
T 1z41_A 213 FVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGA-VGMITDG 289 (338)
T ss_dssp EEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEE-CSSCCSH
T ss_pred EEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEE-ECCCCCH
Q ss_pred hcHHHHHhc--CCeeEEeCC
Q 012335 237 ANFDDVLAN--SDAFMVARG 254 (466)
Q Consensus 237 ~nideI~~~--sDgImiaRg 254 (466)
+..+++++. +|+|++||+
T Consensus 290 ~~a~~~l~~G~aD~V~iGR~ 309 (338)
T 1z41_A 290 SMAEEILQNGRADLIFIGRE 309 (338)
T ss_dssp HHHHHHHHTTSCSEEEECHH
T ss_pred HHHHHHHHcCCceEEeecHH
No 318
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=26.57 E-value=2.2e+02 Score=27.00 Aligned_cols=45 Identities=16% Similarity=0.164 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhcCC----cEEEEEcCCchHHHHHHhc--CCCCCEEEEEec
Q 012335 336 ESLASSAVRTANCIKA----ALILVLTRGGTTAKMVSKY--RPSMPILSVIVP 382 (466)
Q Consensus 336 ~~ia~~av~~a~~~~a----~~Ivv~T~sG~ta~~vSk~--RP~~PIiAv~~~ 382 (466)
+.-+...+..|.+.+. +.|++.| ||++++.+|.+ +-.+|.+.+ +|
T Consensus 42 ~R~a~~~i~~a~~~g~~~~g~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv-~p 92 (303)
T 2v03_A 42 DRAALSMIVEAEKRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLL-MP 92 (303)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEE-EE
T ss_pred HHHHHHHHHHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCcEEEE-EC
Confidence 3444444555554444 5566655 67877655442 455676666 44
No 319
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=26.56 E-value=92 Score=29.44 Aligned_cols=21 Identities=19% Similarity=0.271 Sum_probs=18.8
Q ss_pred CHHHHHHHHHhCCceEEEecC
Q 012335 23 SVEMAEKLLRAGMNVARFNFS 43 (466)
Q Consensus 23 ~~~~l~~li~~G~~v~RiN~s 43 (466)
+.+.++.|-+.|+|++|+-++
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~ 55 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIR 55 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEecc
Confidence 578899999999999999876
No 320
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=26.49 E-value=70 Score=29.91 Aligned_cols=95 Identities=13% Similarity=0.077 Sum_probs=57.1
Q ss_pred ChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHH----------HHhcHHHHHhc-CCe
Q 012335 180 TEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLE----------GVANFDDVLAN-SDA 248 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~----------av~nideI~~~-sDg 248 (466)
+..|...+.+.+.+.|++.|.+.. .-+..+++ ....+..++.++-.-. -++.+++.++. +|.
T Consensus 43 ~~~~~~~~~~~~~~~g~~~i~~~~----~~~~~~~~---~~~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~ 115 (273)
T 2qjg_A 43 GLIDIRKTVNDVAEGGANAVLLHK----GIVRHGHR---GYGKDVGLIIHLSGGTAISPNPLKKVIVTTVEEAIRMGADA 115 (273)
T ss_dssp TSSSHHHHHHHHHHHTCSEEEECH----HHHHSCCC---SSSCCCEEEEECEECCTTSSSTTCCEECSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhcCCCEEEeCH----HHHHHHHH---hhcCCCCEEEEEcCCCcCCCCcccchHHHHHHHHHHcCCCE
Confidence 444555554666789999998642 11111111 1123456666653221 14566666666 788
Q ss_pred e--EEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 249 F--MVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 249 I--miaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
| .+--|.+ +.+++...-+++++.|+++|.|+++
T Consensus 116 v~~~l~~~~~----~~~~~~~~~~~v~~~~~~~g~~viv 150 (273)
T 2qjg_A 116 VSIHVNVGSD----EDWEAYRDLGMIAETCEYWGMPLIA 150 (273)
T ss_dssp EEEEEEETST----THHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEEEecCCC----CHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 8 3333432 5566666778999999999999987
No 321
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=26.27 E-value=2.7e+02 Score=27.73 Aligned_cols=99 Identities=14% Similarity=0.177 Sum_probs=54.2
Q ss_pred hhcHHHHHhccCcCCCcEEEE--cCCCCh---hhHHHHHHHHHhcCCCceEEEe-ecCHHHHhcHHHHHhc-CCeeEEeC
Q 012335 181 EKDKEDILNWGVPNKIDMIAL--SFVRKG---SDLVEVRNLLRVHAKNILLMSK-VENLEGVANFDDVLAN-SDAFMVAR 253 (466)
Q Consensus 181 e~D~~di~~~~~~~~~d~v~~--sfV~sa---~dv~~~r~~l~~~~~~~~IiaK-IE~~~av~nideI~~~-sDgImiaR 253 (466)
+.+.+.+ +.+++.|+|+|.+ ++-.+. +.|+.+|+.. .+++|+++ +-|++.... ..++ +|+|.|+-
T Consensus 99 ~~~~e~~-~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~----~~~~Vi~G~V~T~e~A~~---a~~aGaD~I~Vg~ 170 (361)
T 3r2g_A 99 ENELQRA-EALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLL----GSRCIMAGNVATYAGADY---LASCGADIIKAGI 170 (361)
T ss_dssp HHHHHHH-HHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHH----TTCEEEEEEECSHHHHHH---HHHTTCSEEEECC
T ss_pred HHHHHHH-HHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhc----CCCeEEEcCcCCHHHHHH---HHHcCCCEEEEcC
Confidence 4455566 7778999999988 332222 2344444432 36899996 877765433 3333 89999953
Q ss_pred CcccCcCCch-----hHHHHHHHHHHHHHHcCCCeEEeehhh
Q 012335 254 GDLGMEIPIE-----KIFLAQKVMIHKANIQGKPVVTATQML 290 (466)
Q Consensus 254 gDLg~e~~~e-----~v~~~qk~ii~~~~~~gkPvi~ATqmL 290 (466)
|- |-...-. .+| |-..+..|.++.+|||.+.-+-
T Consensus 171 g~-G~~~~tr~~~g~g~p--~l~aI~~~~~~~~PVIAdGGI~ 209 (361)
T 3r2g_A 171 GG-GSVCSTRIKTGFGVP--MLTCIQDCSRADRSIVADGGIK 209 (361)
T ss_dssp SS-SSCHHHHHHHCCCCC--HHHHHHHHTTSSSEEEEESCCC
T ss_pred CC-CcCccccccCCccHH--HHHHHHHHHHhCCCEEEECCCC
Confidence 21 1100000 012 3344455555445888766543
No 322
>3h43_A Proteasome-activating nucleotidase; regulatory particle, nucleosidase, ATP-binding, cytoplasm, nucleotide-binding, hydrolase; 2.10A {Methanocaldococcus jannaschii}
Probab=26.24 E-value=2.3e+02 Score=22.07 Aligned_cols=20 Identities=25% Similarity=0.438 Sum_probs=14.4
Q ss_pred hccCCCCEEEEeC-CeEEEEE
Q 012335 122 EDLRPGSVILCSD-GTISLTV 141 (466)
Q Consensus 122 ~~v~~Gd~i~idd-G~i~l~V 141 (466)
+.++||++|.++. ....+.+
T Consensus 54 ~~LkpG~rVaLn~~s~~Iv~v 74 (85)
T 3h43_A 54 DDLAPGKRVCLNQQTLTVVDV 74 (85)
T ss_dssp GGCCTTCEEEECTTTCCEEEE
T ss_pred HHCCCCCEEEECCcccCHhhh
Confidence 5789999999997 4333333
No 323
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=26.21 E-value=2.5e+02 Score=25.37 Aligned_cols=85 Identities=6% Similarity=-0.012 Sum_probs=52.0
Q ss_pred hccCcCCCcEEEEcCC---------------CChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-----CCe
Q 012335 189 NWGVPNKIDMIALSFV---------------RKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-----SDA 248 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV---------------~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-----sDg 248 (466)
+.+.+.|+|+|=+... .+.+++.++++.+.+.|-.+..+.-- .....+.++..++. ++.
T Consensus 29 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lGa~~ 107 (262)
T 3p6l_A 29 DKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVY-VAEKSSDWEKMFKFAKAMDLEF 107 (262)
T ss_dssp HHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE-CCSSTTHHHHHHHHHHHTTCSE
T ss_pred HHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEecc-CCccHHHHHHHHHHHHHcCCCE
Confidence 6788999999988643 35778999999999887544333221 11233334444443 356
Q ss_pred eEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 249 FMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 249 ImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
|.+..|. +. -+++...|.++|..+.+
T Consensus 108 v~~~~~~-------~~----~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 108 ITCEPAL-------SD----WDLVEKLSKQYNIKISV 133 (262)
T ss_dssp EEECCCG-------GG----HHHHHHHHHHHTCEEEE
T ss_pred EEecCCH-------HH----HHHHHHHHHHhCCEEEE
Confidence 6665441 22 25677778788876543
No 324
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=26.18 E-value=88 Score=30.35 Aligned_cols=54 Identities=17% Similarity=0.130 Sum_probs=35.2
Q ss_pred CCCHHHHHHHH-HhCCceEEEecCCCC-----HHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 012335 21 SRSVEMAEKLL-RAGMNVARFNFSHGS-----HAYHQETLDNLRTAMNNTGILCAVMLDTKG 76 (466)
Q Consensus 21 ~~~~~~l~~li-~~G~~v~RiN~shg~-----~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~G 76 (466)
..+.+.++.|. +.|+|++|+-+.+.. .++..+.++.+=+.+++.|. .+++|+-+
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi--~VilD~H~ 127 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELGI--YVIIDWHI 127 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHTC--EEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCCC--EEEEEecc
Confidence 44677899986 689999999876532 12233455555555666775 56778754
No 325
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=26.07 E-value=2.4e+02 Score=27.64 Aligned_cols=96 Identities=14% Similarity=0.087 Sum_probs=64.5
Q ss_pred CChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc--CCeeEEeCCcc
Q 012335 179 LTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN--SDAFMVARGDL 256 (466)
Q Consensus 179 lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~--sDgImiaRgDL 256 (466)
++..+...+.+...+.|+++|=-|+ .++|+..++++-... .++|++ =|+....+.+.++++. +|+|++.++-.
T Consensus 202 ~~~~~a~~~~~~l~~~~i~~iEqP~--~~~d~~~~~~l~~~~--~iPI~~-dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 276 (371)
T 2ovl_A 202 WTVDGAIRAARALAPFDLHWIEEPT--IPDDLVGNARIVRES--GHTIAG-GENLHTLYDFHNAVRAGSLTLPEPDVSNI 276 (371)
T ss_dssp SCHHHHHHHHHHHGGGCCSEEECCS--CTTCHHHHHHHHHHH--CSCEEE-CTTCCSHHHHHHHHHHTCCSEECCCTTTT
T ss_pred CCHHHHHHHHHHHHhcCCCEEECCC--CcccHHHHHHHHhhC--CCCEEe-CCCCCCHHHHHHHHHcCCCCEEeeCcccc
Confidence 3444443332455668999998887 345666655543322 366555 4777777778888764 79999987776
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 257 GMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 257 g~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
|- ..--.+++..|+++|.++.+-
T Consensus 277 GG-------i~~~~~i~~~A~~~gi~~~~h 299 (371)
T 2ovl_A 277 GG-------YTTFRKVAALAEANNMLLTSH 299 (371)
T ss_dssp TS-------HHHHHHHHHHHHHTTCCEEEC
T ss_pred CC-------HHHHHHHHHHHHHcCCeEccc
Confidence 53 223367899999999998874
No 326
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=26.06 E-value=82 Score=27.23 Aligned_cols=57 Identities=21% Similarity=0.313 Sum_probs=38.3
Q ss_pred EecCCCEEEEEeC----CCCCCCccEEeecchhhhh---ccCCCCEEEEeCCeEEEEEEEEecCCCeE
Q 012335 91 QLVQGQEITISTD----YSLKGDEKMISMSYKKLAE---DLRPGSVILCSDGTISLTVLDCAKELGLV 151 (466)
Q Consensus 91 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~---~v~~Gd~i~iddG~i~l~V~~v~~~~~~i 151 (466)
-.+.|++.+|+.. |...+......++-..|.. .+++|+.+.+.+ ....|+++. ++.+
T Consensus 64 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~~~G~~~~~~~--~~~~V~~v~--~~~v 127 (151)
T 1ix5_A 64 DMEVGDEKTVKIPAEKAYGNRNEMLIQKIPRDAFKEADFEPEEGMVILAEG--IPATITEVT--DNEV 127 (151)
T ss_dssp TCCTTCCCEEEECTTTSSCSCCSTTBCCEETHHHHTSTTCCCTTEEEESSS--CEEEEEEEE--TTEE
T ss_pred CCCCCCEEEEEECcHHHCCCCCccEEEEEEHHHcCccCCcccccCEEEECC--eEEEEEEEc--CCEE
Confidence 4678888887755 2223334445566666654 488999999988 667788885 4555
No 327
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=26.03 E-value=1.5e+02 Score=26.95 Aligned_cols=95 Identities=5% Similarity=-0.075 Sum_probs=54.2
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHh---cCCeeEEeCCc---ccCcCCc
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLA---NSDAFMVARGD---LGMEIPI 262 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~---~sDgImiaRgD---Lg~e~~~ 262 (466)
+.+.+.|+|+|.+..-.+.+.+.++.+.+.+.| ..++.-+....-++.+.+++. .+|.+.+..-. =|-.++.
T Consensus 81 ~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g--~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~ 158 (228)
T 1h1y_A 81 EPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG--MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMP 158 (228)
T ss_dssp HHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT--CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCG
T ss_pred HHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC--CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCH
Confidence 344669999999988777665233334444444 555566643344677889998 79999885322 1223333
Q ss_pred hhHHHHHHHHHHHHHHc-CCCeEEeehh
Q 012335 263 EKIFLAQKVMIHKANIQ-GKPVVTATQM 289 (466)
Q Consensus 263 e~v~~~qk~ii~~~~~~-gkPvi~ATqm 289 (466)
..+..+ -+..+.. +.|+.++.-+
T Consensus 159 ~~l~~i----~~~~~~~~~~pi~v~GGI 182 (228)
T 1h1y_A 159 EMMEKV----RALRKKYPSLDIEVDGGL 182 (228)
T ss_dssp GGHHHH----HHHHHHCTTSEEEEESSC
T ss_pred HHHHHH----HHHHHhcCCCCEEEECCc
Confidence 332222 1122222 7888877643
No 328
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=26.03 E-value=1.8e+02 Score=26.64 Aligned_cols=121 Identities=11% Similarity=0.023 Sum_probs=68.5
Q ss_pred hccCcCCCcEEEEcCCCCh----hhHHHHHHHHHhcCCCceEEEe------ec------CHHHHhcHHHHHhcC-----C
Q 012335 189 NWGVPNKIDMIALSFVRKG----SDLVEVRNLLRVHAKNILLMSK------VE------NLEGVANFDDVLANS-----D 247 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa----~dv~~~r~~l~~~~~~~~IiaK------IE------~~~av~nideI~~~s-----D 247 (466)
+.+.+.|+|+|=+..-... .++.++++.+.+.|-.+...+- +- ..++++.+...++.+ +
T Consensus 24 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~ 103 (290)
T 2qul_A 24 KRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLGAP 103 (290)
T ss_dssp HHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6778899999988764422 6789999999988744443321 11 123445566655553 4
Q ss_pred eeEEe----CCc--ccCcCC----chhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHhh
Q 012335 248 AFMVA----RGD--LGMEIP----IEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAA 311 (466)
Q Consensus 248 gImia----RgD--Lg~e~~----~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naa 311 (466)
.|.+. .|. +.-..+ ++.+...-+++...|.++|..+.+=+ +.....+...|-+|+-++..+.
T Consensus 104 ~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn--~~~~~~~~~~~~~~~~~l~~~~ 175 (290)
T 2qul_A 104 VFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEV--VNRFEQWLCNDAKEAIAFADAV 175 (290)
T ss_dssp EEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEEC--CCTTTCSSCCSHHHHHHHHHHH
T ss_pred EEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe--CccccccccCCHHHHHHHHHHc
Confidence 44321 132 111112 23444555677778888887655422 1111234556777877777653
No 329
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=25.98 E-value=3.1e+02 Score=27.87 Aligned_cols=124 Identities=11% Similarity=0.093 Sum_probs=72.8
Q ss_pred CCChhcHHHHHhccCcCCCcEEEEcC-CCChhhHHHHHHHHHhcCCCceEEEee-cCHHHHhcHHHHHhc-CC--eeEEe
Q 012335 178 TLTEKDKEDILNWGVPNKIDMIALSF-VRKGSDLVEVRNLLRVHAKNILLMSKV-ENLEGVANFDDVLAN-SD--AFMVA 252 (466)
Q Consensus 178 ~lte~D~~di~~~~~~~~~d~v~~sf-V~sa~dv~~~r~~l~~~~~~~~IiaKI-E~~~av~nideI~~~-sD--gImia 252 (466)
.++..++..|.+...+.|+|.|=+.| .-++.|...++.+. +.+.+..+.+.+ .+.++++ ..+++ .| .++++
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~-~~~~~~~v~~~~r~~~~di~---~A~~aG~~~V~i~~s 132 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAIC-KLGLKCKILTHIRCHMDDAR---VAVETGVDGVDVVIG 132 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSCCSSEEEEEEESCHHHHH---HHHHTTCSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHH-hcCCCCEEEEeeccChhhHH---HHHHcCCCEEEEEee
Confidence 36777777776677789999999855 55666677776654 445556666532 3333332 22222 45 34445
Q ss_pred CCcccC----cCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHhh
Q 012335 253 RGDLGM----EIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAA 311 (466)
Q Consensus 253 RgDLg~----e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naa 311 (466)
-.|+-. ....+++...-.+.++.|+++|..|.+... + ..+.+...+.+++.++
T Consensus 133 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e--d----a~r~d~~~~~~v~~~~ 189 (423)
T 3ivs_A 133 TSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE--D----SFRSDLVDLLSLYKAV 189 (423)
T ss_dssp C-------------CHHHHHHHHHHHHHHTTTCEEEEEEE--S----GGGSCHHHHHHHHHHH
T ss_pred ccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc--c----CcCCCHHHHHHHHHHH
Confidence 444322 234566667778899999999999887532 1 2244556666676663
No 330
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=25.97 E-value=97 Score=30.00 Aligned_cols=67 Identities=9% Similarity=0.067 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 208 SDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 208 ~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
+.++.+++++.+. .+.+++-+-++..++-+.+ ..|.+-||-+++-. .+ +++.+.+.||||++.|
T Consensus 76 ~gl~~l~~~~~~~--Glp~~te~~d~~~~~~l~~---~vd~~kIgA~~~~n------~~-----Ll~~~a~~~kPV~lk~ 139 (292)
T 1o60_A 76 EGLKIFQELKDTF--GVKIITDVHEIYQCQPVAD---VVDIIQLPAFLARQ------TD-----LVEAMAKTGAVINVKK 139 (292)
T ss_dssp HHHHHHHHHHHHH--CCEEEEECCSGGGHHHHHT---TCSEEEECGGGTTC------HH-----HHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---cCCEEEECcccccC------HH-----HHHHHHcCCCcEEEeC
Confidence 3455566666554 4889998888777766654 58999999777642 22 6666668899999998
Q ss_pred hhh
Q 012335 288 QML 290 (466)
Q Consensus 288 qmL 290 (466)
.|-
T Consensus 140 G~~ 142 (292)
T 1o60_A 140 PQF 142 (292)
T ss_dssp CTT
T ss_pred CCC
Confidence 875
No 331
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=25.96 E-value=1.1e+02 Score=29.28 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=46.8
Q ss_pred hHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeeh
Q 012335 209 DLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQ 288 (466)
Q Consensus 209 dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATq 288 (466)
.++.++++..+. .+.+++-+=++..++-+.+. +|.+-||-+++- ..+ +++.+...||||++.|.
T Consensus 74 gl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---~d~~kIga~~~~------n~~-----ll~~~a~~~kPV~lk~G 137 (280)
T 2qkf_A 74 GLKIFEKVKAEF--GIPVITDVHEPHQCQPVAEV---CDVIQLPAFLAR------QTD-----LVVAMAKTGNVVNIKKP 137 (280)
T ss_dssp HHHHHHHHHHHH--CCCEEEECCSGGGHHHHHHH---CSEEEECGGGTT------BHH-----HHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHHHc--CCcEEEecCCHHHHHHHHhh---CCEEEECccccc------CHH-----HHHHHHcCCCcEEEECC
Confidence 355566666554 47888888777777666554 799999966653 222 56666688999999988
Q ss_pred hh
Q 012335 289 ML 290 (466)
Q Consensus 289 mL 290 (466)
|-
T Consensus 138 ~~ 139 (280)
T 2qkf_A 138 QF 139 (280)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 332
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=25.91 E-value=47 Score=32.38 Aligned_cols=77 Identities=10% Similarity=0.117 Sum_probs=0.0
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEE----eecCHHHHhcHHHHHhc-CCeeEEeCCcccCcCCch
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMS----KVENLEGVANFDDVLAN-SDAFMVARGDLGMEIPIE 263 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~Iia----KIE~~~av~nideI~~~-sDgImiaRgDLg~e~~~e 263 (466)
..|.+.|+|||-.+|. .+.+.++.+.. .++|++ +-...+.++++.+.+++ ++|+.+||.=+--+-|..
T Consensus 196 riA~elGAD~VKt~~t--~e~~~~vv~~~-----~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~ 268 (295)
T 3glc_A 196 RIAAEMGAQIIKTYYV--EKGFERIVAGC-----PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVA 268 (295)
T ss_dssp HHHHHTTCSEEEEECC--TTTHHHHHHTC-----SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHH
T ss_pred HHHHHhCCCEEEeCCC--HHHHHHHHHhC-----CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHH
Q ss_pred hHHHHHHHH
Q 012335 264 KIFLAQKVM 272 (466)
Q Consensus 264 ~v~~~qk~i 272 (466)
-+-.+++-+
T Consensus 269 ~~~al~~iv 277 (295)
T 3glc_A 269 MMKAVQAVV 277 (295)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
No 333
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=25.66 E-value=1.3e+02 Score=27.74 Aligned_cols=65 Identities=12% Similarity=0.133 Sum_probs=36.2
Q ss_pred HHHHHHHhcCCCceEEEeecCHH-HHhcHHHHHhc-CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 212 EVRNLLRVHAKNILLMSKVENLE-GVANFDDVLAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 212 ~~r~~l~~~~~~~~IiaKIE~~~-av~nideI~~~-sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
.+.+.+.+.|.++.++.- .+.+ -.+.++.+++. .|||++...|.. .....+..+.++|.||++..
T Consensus 23 gi~~~a~~~g~~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~~~~----------~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 23 FADKAGKDLGFEVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTPDPK----------LGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHHHHTEEEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECSCGG----------GHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHcCCEEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCCCch----------hhHHHHHHHHHCCCcEEEeC
Confidence 344445555544443332 2222 23345555543 799999865532 22345667888999998643
No 334
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=25.65 E-value=1.4e+02 Score=28.89 Aligned_cols=60 Identities=20% Similarity=0.277 Sum_probs=43.9
Q ss_pred HHhcHHHHHhc--CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCC-CCCHHHHHhHHHhh
Q 012335 235 GVANFDDVLAN--SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSP-RPTRAEATDVANAA 311 (466)
Q Consensus 235 av~nideI~~~--sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p-~PTRAEvsDv~naa 311 (466)
...+++++++. .|.|+|+ .|... -..++.+|-++||+|++ ++| ..|.+|...+..+|
T Consensus 55 ~~~~~~~ll~~~~vD~V~i~-------tp~~~----H~~~~~~al~aGkhV~~---------EKPla~~~~e~~~l~~~a 114 (352)
T 3kux_A 55 VVSDPQMLFNDPSIDLIVIP-------TPNDT----HFPLAQSALAAGKHVVV---------DKPFTVTLSQANALKEHA 114 (352)
T ss_dssp EESCHHHHHHCSSCCEEEEC-------SCTTT----HHHHHHHHHHTTCEEEE---------CSSCCSCHHHHHHHHHHH
T ss_pred eECCHHHHhcCCCCCEEEEe-------CChHH----HHHHHHHHHHCCCcEEE---------ECCCcCCHHHHHHHHHHH
Confidence 34678999986 7999997 33322 24566788899999986 445 67889999988886
Q ss_pred hhh
Q 012335 312 ENF 314 (466)
Q Consensus 312 E~~ 314 (466)
++.
T Consensus 115 ~~~ 117 (352)
T 3kux_A 115 DDA 117 (352)
T ss_dssp HHT
T ss_pred HHc
Confidence 653
No 335
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=25.57 E-value=56 Score=30.56 Aligned_cols=67 Identities=10% Similarity=0.164 Sum_probs=45.0
Q ss_pred cCCCCCChhcHHHHHhccCcCCCcEEEEc--CC-----------C--ChhhHHHHHHHHHhcCCCceEEEeecCHHHHhc
Q 012335 174 VDLPTLTEKDKEDILNWGVPNKIDMIALS--FV-----------R--KGSDLVEVRNLLRVHAKNILLMSKVENLEGVAN 238 (466)
Q Consensus 174 ~~lp~lte~D~~di~~~~~~~~~d~v~~s--fV-----------~--sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~n 238 (466)
++...|++..+....+.+.+.|+|||=-| |. . |.+|++.+++.++..|.+++|-|- -|+++
T Consensus 120 lEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaa----GGirt 195 (226)
T 1vcv_A 120 TEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMA----GGIRT 195 (226)
T ss_dssp CCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEE----SSCCS
T ss_pred EeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEe----CCCCC
Confidence 34445676666666577889999999999 87 2 567888888887766765555442 35555
Q ss_pred HHHHHh
Q 012335 239 FDDVLA 244 (466)
Q Consensus 239 ideI~~ 244 (466)
.++.++
T Consensus 196 ~~~al~ 201 (226)
T 1vcv_A 196 REQAKA 201 (226)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 336
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=25.52 E-value=1e+02 Score=27.05 Aligned_cols=61 Identities=8% Similarity=0.061 Sum_probs=35.8
Q ss_pred HHHHHHhcCCcEEEEEcCCchH-HHHHHhcCC-CCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 342 AVRTANCIKAALILVLTRGGTT-AKMVSKYRP-SMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 342 av~~a~~~~a~~Ivv~T~sG~t-a~~vSk~RP-~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
|.........++|+....+|.. .+.+-+. | .+||++++ . ........-.+-.|+.-++..+
T Consensus 36 al~~l~~~~~dlvilp~~~g~~~~~~lr~~-~~~~~ii~lt------~------~~~~~~~~~~~~~Ga~~~l~Kp 98 (223)
T 2hqr_A 36 GEYLMDIRNYDLVMVSDKNALSFVSRIKEK-HSSIVVLVSS------D------NPTSEEEVHAFEQGADDYIAKP 98 (223)
T ss_dssp HHHHHTTSCCSEEEECCTTHHHHHHHHHHH-CTTSEEEEEE------S------SCCHHHHHHHHHHTCSEEEETT
T ss_pred HHHHHhcCCCCEEEeCCCCHHHHHHHHHhC-CCCCcEEEEE------C------CCCHHHHHHHHHcCCCEEEECC
Confidence 3344455567877743446654 4455555 7 89999992 1 2222223334566888888765
No 337
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=25.47 E-value=94 Score=26.27 Aligned_cols=52 Identities=12% Similarity=0.213 Sum_probs=37.7
Q ss_pred HhcHHHHHh--cCCeeEE--eCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 236 VANFDDVLA--NSDAFMV--ARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 236 v~nideI~~--~sDgImi--aRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
+..+++.+. ..|.|+| |-.|+....+.+.+....+++++.+++.+.++++.+
T Consensus 55 ~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~ 110 (185)
T 3hp4_A 55 LRRLDALLEQYEPTHVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALME 110 (185)
T ss_dssp HHHHHHHHHHHCCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHhhcCCCEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 344444443 3565554 455776777888999999999999999998888765
No 338
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=25.45 E-value=1.2e+02 Score=30.16 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=37.1
Q ss_pred CceEEEeecCHHHHhcHHHHHh--cCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 223 NILLMSKVENLEGVANFDDVLA--NSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 223 ~~~IiaKIE~~~av~nideI~~--~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
.++|++ =|+......+.++++ .+|.|.+..+-.|- ..--.+|...|+++|.|+..
T Consensus 245 ~iPIa~-dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GG-------it~~~~ia~~A~~~gi~~~~ 301 (374)
T 3sjn_A 245 SQKIAG-GESLTTRYEFQEFITKSNADIVQPDITRCGG-------ITEMKKIYDIAQMNGTQLIP 301 (374)
T ss_dssp SSEEEE-CTTCCHHHHHHHHHHHHCCSEECCBTTTSSH-------HHHHHHHHHHHHHHTCEECC
T ss_pred CCCEEe-CCCcCCHHHHHHHHHcCCCCEEEeCccccCC-------HHHHHHHHHHHHHcCCEEEe
Confidence 345443 466666777777774 47999886555542 12346788999999999865
No 339
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=25.25 E-value=43 Score=33.69 Aligned_cols=71 Identities=13% Similarity=0.025 Sum_probs=43.2
Q ss_pred ChhcHHHHHhccCcCCCcEEEEcCCC-----ChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc--CCeeEEe
Q 012335 180 TEKDKEDILNWGVPNKIDMIALSFVR-----KGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN--SDAFMVA 252 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~sfV~-----sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~--sDgImia 252 (466)
+..+...+.+...+.|+|+|-++-=. -+.++..+|+.+ ++.||+ .+.. ..+..+++++. +|+|++|
T Consensus 264 ~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~ir~~~-----~iPvi~-~G~i-t~~~a~~~l~~g~aD~V~ig 336 (379)
T 3aty_A 264 PEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSY-----SGVKIS-NLRY-DFEEADQQIREGKVDAVAFG 336 (379)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCCHHHHHHTTC-----CSCEEE-ESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccHHHHHHHHHC-----CCcEEE-ECCC-CHHHHHHHHHcCCCeEEEec
Confidence 33444444355678999999998511 011144444432 456665 2332 35567788875 8999999
Q ss_pred CCccc
Q 012335 253 RGDLG 257 (466)
Q Consensus 253 RgDLg 257 (466)
|+=|+
T Consensus 337 R~~l~ 341 (379)
T 3aty_A 337 AKFIA 341 (379)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99776
No 340
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=25.06 E-value=1.2e+02 Score=29.88 Aligned_cols=74 Identities=20% Similarity=0.171 Sum_probs=43.2
Q ss_pred CChhcHHHHHhccCcCCCcEEEEcC---C------CChhhHHHHHHHHHhcCCCceEEE--eecCHHHHhcHHHHHhc--
Q 012335 179 LTEKDKEDILNWGVPNKIDMIALSF---V------RKGSDLVEVRNLLRVHAKNILLMS--KVENLEGVANFDDVLAN-- 245 (466)
Q Consensus 179 lte~D~~di~~~~~~~~~d~v~~sf---V------~sa~dv~~~r~~l~~~~~~~~Iia--KIE~~~av~nideI~~~-- 245 (466)
.+..|...+.+...+.|+|+|-++- . ..+.++..++++-... +++|++ .|-+++ ..+++++.
T Consensus 226 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~--~iPVi~~GgI~s~e---~a~~~L~~G~ 300 (340)
T 3gr7_A 226 LTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVGLITSGW---QAEEILQNGR 300 (340)
T ss_dssp CCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT--TCCEEEESSCCCHH---HHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc--CCcEEeeCCCCCHH---HHHHHHHCCC
Confidence 3455655554666789999999972 1 1122333333322221 456665 455543 45566665
Q ss_pred CCeeEEeCCccc
Q 012335 246 SDAFMVARGDLG 257 (466)
Q Consensus 246 sDgImiaRgDLg 257 (466)
+|+|++||+=|.
T Consensus 301 aD~V~iGR~~la 312 (340)
T 3gr7_A 301 ADLVFLGRELLR 312 (340)
T ss_dssp CSEEEECHHHHH
T ss_pred eeEEEecHHHHh
Confidence 899999998665
No 341
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=25.03 E-value=1.4e+02 Score=28.54 Aligned_cols=93 Identities=11% Similarity=0.120 Sum_probs=55.0
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCC-ceEEEeecCHHHHhcHHHHHhcCCeeEEe--C-CcccCcCCchh
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKN-ILLMSKVENLEGVANFDDVLANSDAFMVA--R-GDLGMEIPIEK 264 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~-~~IiaKIE~~~av~nideI~~~sDgImia--R-gDLg~e~~~e~ 264 (466)
+.+.+.|+|++.++=.-- ++..++++.+.+.|-+ +.+++- . ...+.+.+|.+.++|.+-. + |-=|..- .
T Consensus 119 ~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~gl~~I~lvap-~--t~~eri~~i~~~~~gfiY~vs~~GvTG~~~---~ 191 (271)
T 3nav_A 119 QRCQKAGVDSVLIADVPT-NESQPFVAAAEKFGIQPIFIAPP-T--ASDETLRAVAQLGKGYTYLLSRAGVTGAET---K 191 (271)
T ss_dssp HHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTTCEEEEEECT-T--CCHHHHHHHHHHCCSCEEECCCC-----------
T ss_pred HHHHHCCCCEEEECCCCH-HHHHHHHHHHHHcCCeEEEEECC-C--CCHHHHHHHHHHCCCeEEEEeccCCCCccc---C
Confidence 445789999999886543 5678888888887744 333321 2 2347889999988766432 2 1112211 1
Q ss_pred HHHHHHHHHHHHHHc-CCCeEEeeh
Q 012335 265 IFLAQKVMIHKANIQ-GKPVVTATQ 288 (466)
Q Consensus 265 v~~~qk~ii~~~~~~-gkPvi~ATq 288 (466)
++.-....++..+++ ..|+++..-
T Consensus 192 ~~~~~~~~v~~vr~~~~~Pv~vGfG 216 (271)
T 3nav_A 192 ANMPVHALLERLQQFDAPPALLGFG 216 (271)
T ss_dssp CCHHHHHHHHHHHHTTCCCEEECSS
T ss_pred CchhHHHHHHHHHHhcCCCEEEECC
Confidence 223345666666665 679998654
No 342
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=24.98 E-value=1.3e+02 Score=29.47 Aligned_cols=42 Identities=21% Similarity=0.280 Sum_probs=32.0
Q ss_pred CCHH-HHHHHHHhCC----------------ceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 012335 22 RSVE-MAEKLLRAGM----------------NVARFNFSHGSHAYHQETLDNLRTAMNN 63 (466)
Q Consensus 22 ~~~~-~l~~li~~G~----------------~v~RiN~shg~~~~~~~~i~~ir~~~~~ 63 (466)
.+.+ ..+.|.+.|+ +.+||+|++.+.++..+.++.++++.++
T Consensus 365 ~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 365 DVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp CCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 4455 3566777764 4689999988999999999999887653
No 343
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=24.95 E-value=4.5e+02 Score=24.98 Aligned_cols=126 Identities=16% Similarity=0.183 Sum_probs=77.9
Q ss_pred CCChhcHHHHHhccCcCCCcEEEEcC-CCChhhHHHHHHHHHhcCCCceEEEeecC-HHHHhcHHHHHhcC--C--eeEE
Q 012335 178 TLTEKDKEDILNWGVPNKIDMIALSF-VRKGSDLVEVRNLLRVHAKNILLMSKVEN-LEGVANFDDVLANS--D--AFMV 251 (466)
Q Consensus 178 ~lte~D~~di~~~~~~~~~d~v~~sf-V~sa~dv~~~r~~l~~~~~~~~IiaKIE~-~~av~nideI~~~s--D--gImi 251 (466)
.++..|+..|.+...+.|+|.|=+.| +.++.|.+.++.+... .++..+.+-.-+ ..+++..-+-+..+ | .+++
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~~~~~~di~~a~~~~~~ag~~~v~i~~ 101 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKA-IKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFL 101 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHH-CCSSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHh-cCCCEEEEEecCCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 35677777775677779999997754 4466777777776543 456777776643 33443322222112 3 3455
Q ss_pred eCCccc----CcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh
Q 012335 252 ARGDLG----MEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 310 (466)
Q Consensus 252 aRgDLg----~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na 310 (466)
+-.|+- .....++.....+++++.|+++|..|.+... ..++-+...+.+++.+
T Consensus 102 ~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~ 158 (293)
T 3ewb_X 102 ATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQT 158 (293)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHH
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHH
Confidence 555543 2445677777888999999999999887543 1223444455555555
No 344
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=24.78 E-value=77 Score=29.29 Aligned_cols=49 Identities=20% Similarity=0.185 Sum_probs=31.4
Q ss_pred HHHHHHHHHhCCceEEEecC-CCC----------------HHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 24 VEMAEKLLRAGMNVARFNFS-HGS----------------HAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 24 ~~~l~~li~~G~~v~RiN~s-hg~----------------~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
.+.|+.|-++|+|+.|+=++ ++. .+.|.+.++.+=+.+++.|. -+++|+
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi--~vil~~ 110 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNI--LVFPCL 110 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTC--EEEEEE
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCC--eEEEEe
Confidence 34577899999999999432 111 13455566666666777775 455565
No 345
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=24.71 E-value=92 Score=31.86 Aligned_cols=23 Identities=22% Similarity=0.200 Sum_probs=19.9
Q ss_pred CCCHHHH-HHHHHhCCceEEEecC
Q 012335 21 SRSVEMA-EKLLRAGMNVARFNFS 43 (466)
Q Consensus 21 ~~~~~~l-~~li~~G~~v~RiN~s 43 (466)
....+.+ +.|-+.|+|++||-++
T Consensus 65 ~~~~~di~~~l~~~G~N~VRl~v~ 88 (481)
T 2osx_A 65 QFTEADLAREYADMGTNFVRFLIS 88 (481)
T ss_dssp SCCHHHHHHHHHHHCCCEEEEEEC
T ss_pred cccHHHHHHHHHHCCCCEEEEeCc
Confidence 4567888 8999999999999876
No 346
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=24.64 E-value=99 Score=27.74 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=34.9
Q ss_pred HHHHHHHHHhCCceEEEecCCCCHHHH---HHHHHHHHHHHHHcCCce
Q 012335 24 VEMAEKLLRAGMNVARFNFSHGSHAYH---QETLDNLRTAMNNTGILC 68 (466)
Q Consensus 24 ~~~l~~li~~G~~v~RiN~shg~~~~~---~~~i~~ir~~~~~~~~~i 68 (466)
.+.++.++++|++.+-|.+-.+++.+. .++++.+++..+.++.++
T Consensus 34 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v 81 (227)
T 2tps_A 34 VTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPF 81 (227)
T ss_dssp HHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHcCCeE
Confidence 567999999999998888777777666 677888887766666543
No 347
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=24.64 E-value=1.2e+02 Score=27.96 Aligned_cols=100 Identities=9% Similarity=0.053 Sum_probs=0.0
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEE--eecCHH-------HHhcHHHHHhc-C
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMS--KVENLE-------GVANFDDVLAN-S 246 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~Iia--KIE~~~-------av~nideI~~~-s 246 (466)
|--+..+...+.+...+.|+.+|.+ .+.++++++|+.. +++|+. |.+-.. -++.+++..++ +
T Consensus 31 pl~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Ga 102 (232)
T 3igs_A 31 PLDKPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-----SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGA 102 (232)
T ss_dssp TTCSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTC
T ss_pred CCCCcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCC
Q ss_pred CeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhH
Q 012335 247 DAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLE 291 (466)
Q Consensus 247 DgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLe 291 (466)
|.|.+.-..+.-. ...+++++.++++|.++++-..-+|
T Consensus 103 d~V~l~~~~~~~p-------~~l~~~i~~~~~~g~~v~~~v~t~e 140 (232)
T 3igs_A 103 AIIAVDGTARQRP-------VAVEALLARIHHHHLLTMADCSSVD 140 (232)
T ss_dssp SEEEEECCSSCCS-------SCHHHHHHHHHHTTCEEEEECCSHH
T ss_pred CEEEECccccCCH-------HHHHHHHHHHHHCCCEEEEeCCCHH
No 348
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=24.43 E-value=1.1e+02 Score=29.07 Aligned_cols=90 Identities=12% Similarity=0.006 Sum_probs=0.0
Q ss_pred cHHHHHhccCcCCCcEEEEc--------CCCCh---------------------hhHHHHHHHHHhcCCCceEEE--eec
Q 012335 183 DKEDILNWGVPNKIDMIALS--------FVRKG---------------------SDLVEVRNLLRVHAKNILLMS--KVE 231 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~s--------fV~sa---------------------~dv~~~r~~l~~~~~~~~Iia--KIE 231 (466)
+...+.+.+.+.|+|+|.++ ..++. +.+.++++.+ +++||+ -|-
T Consensus 177 ~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~-----~ipvia~GGI~ 251 (311)
T 1ep3_A 177 DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV-----DIPIIGMGGVA 251 (311)
T ss_dssp CSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC-----SSCEEECSSCC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc-----CCCEEEECCcC
Q ss_pred CHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCC
Q 012335 232 NLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKP 282 (466)
Q Consensus 232 ~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkP 282 (466)
+.+.+..+-+ .-+|++++||+=|. +.+-+..+.+.+-......|.+
T Consensus 252 ~~~d~~~~l~--~GAd~V~vg~~~l~---~p~~~~~i~~~l~~~~~~~g~~ 297 (311)
T 1ep3_A 252 NAQDVLEMYM--AGASAVAVGTANFA---DPFVCPKIIDKLPELMDQYRIE 297 (311)
T ss_dssp SHHHHHHHHH--HTCSEEEECTHHHH---CTTHHHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHH--cCCCEEEECHHHHc---CcHHHHHHHHHHHHHHHHcCCC
No 349
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=24.41 E-value=88 Score=29.79 Aligned_cols=74 Identities=14% Similarity=0.049 Sum_probs=46.2
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEE-Eeec-------CHHHHhcHHHHHhc-CCeeEEeCCcccCc
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLM-SKVE-------NLEGVANFDDVLAN-SDAFMVARGDLGME 259 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~Ii-aKIE-------~~~av~nideI~~~-sDgImiaRgDLg~e 259 (466)
+.+.+.|+|+|..| ++++..+|+.++ .+..++ .=|- .+.=+.++.+.+++ +|.+++||+=+..+
T Consensus 151 ~~a~~~G~dGvV~s----~~e~~~ir~~~~---~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~ 223 (259)
T 3tfx_A 151 KMAKHSGADGVICS----PLEVKKLHENIG---DDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLAS 223 (259)
T ss_dssp HHHHHTTCCEEECC----GGGHHHHHHHHC---SSSEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSS
T ss_pred HHHHHhCCCEEEEC----HHHHHHHHhhcC---CccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCC
Confidence 45567899988765 899999998774 333333 3331 11223457777776 89999999877766
Q ss_pred CCchhHHHHH
Q 012335 260 IPIEKIFLAQ 269 (466)
Q Consensus 260 ~~~e~v~~~q 269 (466)
=|.+.+..+.
T Consensus 224 dp~~a~~~i~ 233 (259)
T 3tfx_A 224 DPKAAYEAIK 233 (259)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5554443333
No 350
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=24.27 E-value=73 Score=31.57 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=34.0
Q ss_pred EEEecCCCCCCHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHH
Q 012335 13 IVCTLGPASRSVEMAEKLLRA--GMNVARFNFSHGSHAYHQETLDNLRT 59 (466)
Q Consensus 13 Ii~TiGp~~~~~~~l~~li~~--G~~v~RiN~shg~~~~~~~~i~~ir~ 59 (466)
+.+.+|....+.+.++.++++ |++++=+.++||....+.+.|+.+|+
T Consensus 109 v~~~~g~~~~~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~ 157 (351)
T 2c6q_A 109 LAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRK 157 (351)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHH
T ss_pred eEeecCCChHHHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHH
Confidence 455556554457788889998 99999999999977665555655554
No 351
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=24.25 E-value=2.6e+02 Score=21.93 Aligned_cols=82 Identities=10% Similarity=0.112 Sum_probs=43.4
Q ss_pred HHHHHHhcCCcEEEEEc----CCchH-HHHHHh--cCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcC
Q 012335 342 AVRTANCIKAALILVLT----RGGTT-AKMVSK--YRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSS 414 (466)
Q Consensus 342 av~~a~~~~a~~Ivv~T----~sG~t-a~~vSk--~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~ 414 (466)
|.+...+...++|++-. .+|.. .+.+.+ ..|.+||++++ . ..........+-.|+.-++..
T Consensus 43 a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s------~------~~~~~~~~~~~~~g~~~~l~k 110 (142)
T 3cg4_A 43 CIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLT------A------KNAPDAKMIGLQEYVVDYITK 110 (142)
T ss_dssp HHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEE------C------TTCCCCSSTTGGGGEEEEEES
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEE------C------CCCHHHHHHHHhcCccEEEeC
Confidence 33444555677666643 24443 455655 67899999992 1 111122223345688888776
Q ss_pred CCCCCCCccCHHHHHHHHHHHHHHc
Q 012335 415 GSARASDEESTEETIEFALQHAKAK 439 (466)
Q Consensus 415 ~~~~~~~~~~~e~~i~~al~~~~~~ 439 (466)
+.. .+.....++.++...+..
T Consensus 111 p~~----~~~l~~~i~~~~~~~~~~ 131 (142)
T 3cg4_A 111 PFD----NEDLIEKTTFFMGFVRNQ 131 (142)
T ss_dssp SCC----HHHHHHHHHHHHHHHHHC
T ss_pred CCC----HHHHHHHHHHHHHHHhhc
Confidence 521 123344555555554443
No 352
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=24.15 E-value=1.2e+02 Score=27.93 Aligned_cols=100 Identities=8% Similarity=0.096 Sum_probs=0.0
Q ss_pred CCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCH---------HHHhcHHHHHhc-C
Q 012335 177 PTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENL---------EGVANFDDVLAN-S 246 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~---------~av~nideI~~~-s 246 (466)
|--++.+...+.+.+.+.|+.+|.+ .+.++++++|+.. +++|+..+=.- .-++.+++..++ +
T Consensus 31 pl~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGa 102 (229)
T 3q58_A 31 PMDKPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-----SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGA 102 (229)
T ss_dssp TTCSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTC
T ss_pred CCCCcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCC
Q ss_pred CeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhH
Q 012335 247 DAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLE 291 (466)
Q Consensus 247 DgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLe 291 (466)
|.|.+.-..+.-. ...+++++.+++.|.++++-..-+|
T Consensus 103 d~I~l~~~~~~~p-------~~l~~~i~~~~~~g~~v~~~v~t~e 140 (229)
T 3q58_A 103 DIIAFDASFRSRP-------VDIDSLLTRIRLHGLLAMADCSTVN 140 (229)
T ss_dssp SEEEEECCSSCCS-------SCHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEECccccCCh-------HHHHHHHHHHHHCCCEEEEecCCHH
No 353
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=24.13 E-value=78 Score=30.29 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=28.6
Q ss_pred EecCCCCCCHHHHHHHHHhC--CceEEEecCCCCHHHH
Q 012335 15 CTLGPASRSVEMAEKLLRAG--MNVARFNFSHGSHAYH 50 (466)
Q Consensus 15 ~TiGp~~~~~~~l~~li~~G--~~v~RiN~shg~~~~~ 50 (466)
.|.-|..-+++.++.|.++| ++-+-|.+-+++.+-+
T Consensus 92 ~~~~p~~l~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl 129 (304)
T 2qgq_A 92 MYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKIL 129 (304)
T ss_dssp CCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHH
T ss_pred eeeecccCCHHHHHHHHhCCCCccEEEEecccCCHHHH
Confidence 46778888999999999999 7777777778876543
No 354
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=24.12 E-value=85 Score=27.97 Aligned_cols=68 Identities=15% Similarity=0.175 Sum_probs=40.4
Q ss_pred hHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHH-HHHHHHHHHHHcCCCeEEee
Q 012335 209 DLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFL-AQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 209 dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~-~qk~ii~~~~~~gkPvi~AT 287 (466)
.+..+.+.|.+.|.++.++ .+.++| +.+|+|++ +|--. +-..+.. ....++..+++.|||++--+
T Consensus 14 n~~si~~al~~~G~~~~v~---------~~~~~l-~~~D~lil-PG~g~---~~~~~~~~~~~~~i~~~~~~~~PvlGIC 79 (211)
T 4gud_A 14 NISSVKFAIERLGYAVTIS---------RDPQVV-LAADKLFL-PGVGT---ASEAMKNLTERDLIELVKRVEKPLLGIC 79 (211)
T ss_dssp THHHHHHHHHHTTCCEEEE---------CCHHHH-HHCSEEEE-CCCSC---HHHHHHHHHHTTCHHHHHHCCSCEEEET
T ss_pred hHHHHHHHHHHCCCEEEEE---------CCHHHH-hCCCEEEE-CCCCC---HHHHHHHHHhcChHHHHHHcCCCEEEEc
Confidence 4566777888888776664 234444 45799999 34211 1111111 12345778888999987544
Q ss_pred ---hhh
Q 012335 288 ---QML 290 (466)
Q Consensus 288 ---qmL 290 (466)
|+|
T Consensus 80 lG~QlL 85 (211)
T 4gud_A 80 LGMQLL 85 (211)
T ss_dssp HHHHTT
T ss_pred hhHhHH
Confidence 665
No 355
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=23.97 E-value=1.1e+02 Score=31.18 Aligned_cols=50 Identities=14% Similarity=0.284 Sum_probs=38.4
Q ss_pred CHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 23 SVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 23 ~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
+.++|.+|.++|.++.|+-. -+.+ ..+.+..||+.....+.++.+..|+.
T Consensus 40 Tv~QI~~L~~aG~eiVRvaV--p~~~-~A~al~~I~~~l~~~~~~vPLVADiH 89 (406)
T 4g9p_A 40 TTAQVLELHRAGSEIVRLTV--NDEE-AAKAVPEIKRRLLAEGVEVPLVGDFH 89 (406)
T ss_dssp HHHHHHHHHHHTCSEEEEEC--CSHH-HHHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEec--CCHH-HHHhHHHHHHHHHhcCCCCceEeeec
Confidence 46788999999999999854 3444 45678888877666778888888874
No 356
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=23.96 E-value=2.8e+02 Score=22.27 Aligned_cols=61 Identities=15% Similarity=0.145 Sum_probs=35.4
Q ss_pred HHHHHhcCCcEEEEEc----CCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccC-cEEEEcCC
Q 012335 343 VRTANCIKAALILVLT----RGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRA-LVPVLSSG 415 (466)
Q Consensus 343 v~~a~~~~a~~Ivv~T----~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~G-V~P~l~~~ 415 (466)
.....+...++|++-. .+|.. .+.+.+..|.+||+++ |. ........-.+-.| +.-++..+
T Consensus 51 ~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~------s~------~~~~~~~~~~~~~g~~~~~l~KP 117 (153)
T 3hv2_A 51 LQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILL------TG------DPDLKLIAKAINEGEIYRYLSKP 117 (153)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEE------CC------CCCHHHHHHHHHTTCCSEEECSS
T ss_pred HHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEE------EC------CCCHHHHHHHHhCCCcceEEeCC
Confidence 3344556778777643 23443 4566667799999999 21 22222222334556 88887765
No 357
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=23.96 E-value=1.9e+02 Score=27.65 Aligned_cols=68 Identities=16% Similarity=0.232 Sum_probs=42.1
Q ss_pred CCeEEEEec--CCCC-------CCH----HHHHHHHHhCCceEEEec-CC--C-----CHHHHHHHHHHHHHHHHHcCCc
Q 012335 9 PKTKIVCTL--GPAS-------RSV----EMAEKLLRAGMNVARFNF-SH--G-----SHAYHQETLDNLRTAMNNTGIL 67 (466)
Q Consensus 9 r~tkIi~Ti--Gp~~-------~~~----~~l~~li~~G~~v~RiN~-sh--g-----~~~~~~~~i~~ir~~~~~~~~~ 67 (466)
.+|+|++-| -|-| .+. +..++|+++|+++.=+|. |- | ..|+..+++..++...+. +.|
T Consensus 4 ~~~~imgilN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~~p 82 (280)
T 1eye_A 4 APVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GIT 82 (280)
T ss_dssp -CCEEEEEEECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-TCC
T ss_pred CCcEEEEEEeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-CCE
Confidence 467888877 3421 233 345779999999999997 32 1 257788888888877664 544
Q ss_pred eEEEecCCCCee
Q 012335 68 CAVMLDTKGPEI 79 (466)
Q Consensus 68 i~i~~Dl~Gpki 79 (466)
|.+|+.-|++
T Consensus 83 --iSIDT~~~~v 92 (280)
T 1eye_A 83 --VSIDTMRADV 92 (280)
T ss_dssp --EEEECSCHHH
T ss_pred --EEEeCCCHHH
Confidence 5568875553
No 358
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=23.89 E-value=87 Score=30.23 Aligned_cols=42 Identities=10% Similarity=0.162 Sum_probs=32.3
Q ss_pred CCHHHHHHHHHhCC-----------ceEEEecCCCCHHHHHHHHHHHHHHHHHc
Q 012335 22 RSVEMAEKLLRAGM-----------NVARFNFSHGSHAYHQETLDNLRTAMNNT 64 (466)
Q Consensus 22 ~~~~~l~~li~~G~-----------~v~RiN~shg~~~~~~~~i~~ir~~~~~~ 64 (466)
...+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.+++
T Consensus 344 ~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 344 DSNAFCEKAKEEDVLIVAADGFGCPGWVRISYCV-DREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp CHHHHHHHHHTTTEECEESGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 44556666777776 458999984 8888899999999887654
No 359
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=23.88 E-value=1.4e+02 Score=28.84 Aligned_cols=55 Identities=13% Similarity=0.194 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCceEEEec---CCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCee
Q 012335 25 EMAEKLLRAGMNVARFNF---SHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEI 79 (466)
Q Consensus 25 ~~l~~li~~G~~v~RiN~---shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~Gpki 79 (466)
...++.++.|++++-+=. +..+..+..+.+..+.+.++++|.|+-+.+...|+.+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v 169 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRC 169 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSS
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCcc
Confidence 356778889999988332 2222455556677777777789999877777777653
No 360
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=23.87 E-value=1.1e+02 Score=30.21 Aligned_cols=62 Identities=8% Similarity=-0.053 Sum_probs=37.5
Q ss_pred CeEEEEecCCCCC--CHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 10 KTKIVCTLGPASR--SVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 10 ~tkIi~TiGp~~~--~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
+....+|+|-.+. -.+..+++.++|.+.+.+++.| +.+.-.++++.+| +..|..+.|++|..
T Consensus 134 ~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr---~a~g~d~~l~vDan 197 (379)
T 2rdx_A 134 GAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRACL---PLLEPGEKAMADAN 197 (379)
T ss_dssp SEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHG---GGSCTTCEEEEECT
T ss_pred ceeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHH---HhcCCCCEEEEECC
Confidence 4555677763211 1234566789999999999998 4544444555444 44554455666653
No 361
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=23.86 E-value=1.7e+02 Score=29.23 Aligned_cols=54 Identities=17% Similarity=0.037 Sum_probs=33.1
Q ss_pred ceEEEeecCHHHHhcHHHHHh--cCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 224 ILLMSKVENLEGVANFDDVLA--NSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 224 ~~IiaKIE~~~av~nideI~~--~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
++|++ =|+....+.+.++++ .+|.|.+-.+-.|- ..--.+|+..|+++|.++.+
T Consensus 270 iPIa~-dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG-------it~~~~ia~~A~~~gi~~~~ 325 (410)
T 2gl5_A 270 IPIAT-GERSYTRWGYRELLEKQSIAVAQPDLCLCGG-------ITEGKKICDYANIYDTTVQV 325 (410)
T ss_dssp SCEEE-CTTCCTTHHHHHHHHTTCCSEECCCTTTTTH-------HHHHHHHHHHHHTTTCEECC
T ss_pred CCEEe-cCCcCCHHHHHHHHHcCCCCEEecCccccCC-------HHHHHHHHHHHHHcCCeEee
Confidence 44433 455555556666664 37888875444432 12235788899999999765
No 362
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=23.85 E-value=73 Score=30.45 Aligned_cols=60 Identities=13% Similarity=0.135 Sum_probs=43.2
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEe--ecCHHHHhcHHHHHhc-CCeeEEeC
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSK--VENLEGVANFDDVLAN-SDAFMVAR 253 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaK--IE~~~av~nideI~~~-sDgImiaR 253 (466)
..+++.|+|+|.++- -+++++.++++.+.....+++|.|= | -.+|+.+++++ +|+|-++.
T Consensus 196 ~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~i~AsGGI----~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 196 KNAMNAGADIVMCDN-LSVLETKEIAAYRDAHYPFVLLEASGNI----SLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp HHHHHHTCSEEEEET-CCHHHHHHHHHHHHHHCTTCEEEEESSC----CTTTHHHHHTTTCSEEECTH
T ss_pred HHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCcEEEEECCC----CHHHHHHHHHcCCcEEEEcH
Confidence 445678999999986 5688888888877654345655442 2 24788888887 79887764
No 363
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=23.65 E-value=1.1e+02 Score=30.27 Aligned_cols=60 Identities=18% Similarity=0.255 Sum_probs=39.8
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 10 KTKIVCTLGPASRSVE----MAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 10 ~tkIi~TiGp~~~~~~----~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
+....+|+|.. .+++ ..+++.++|.+.+.|++.+.+.+. .+.++.+|++. |..+.|++|.
T Consensus 152 ~vp~~~~~g~~-~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~---g~d~~l~vDa 215 (388)
T 2nql_A 152 SFPAYVSGLPE-RTLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQVL---GPQAKIAADM 215 (388)
T ss_dssp EEEEEEECCCC-SSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHH---CTTSEEEEEC
T ss_pred ceEeeEEeCCC-CCHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHh---CCCCEEEEEC
Confidence 45667787643 2444 345678899999999998755666 67777777654 4345555665
No 364
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=23.62 E-value=3.5e+02 Score=26.53 Aligned_cols=61 Identities=15% Similarity=0.170 Sum_probs=38.7
Q ss_pred eEEEEec-CCCCCCHHHH----HHHHHh-CCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 11 TKIVCTL-GPASRSVEMA----EKLLRA-GMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 11 tkIi~Ti-Gp~~~~~~~l----~~li~~-G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
....+|+ |....+++.+ +++++. |.+.+.+.+...+.++-.+.++.+|+ ..|..+.+++|.
T Consensus 138 v~~y~s~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~---~~g~~~~l~vDa 204 (372)
T 3tj4_A 138 VEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRE---RVDSAVRIAIDG 204 (372)
T ss_dssp EEEEECTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHH---HSCTTCEEEEEC
T ss_pred eEEEEecCCccCCCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHH---HcCCCCcEEeeC
Confidence 6778884 3223344433 357778 99999999987776665555555554 445445566665
No 365
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=23.49 E-value=2.8e+02 Score=26.11 Aligned_cols=67 Identities=6% Similarity=0.104 Sum_probs=39.9
Q ss_pred HHHHHHHHHhcCCCceEEEeecCHH-HHhcHHHHHh---cCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 210 LVEVRNLLRVHAKNILLMSKVENLE-GVANFDDVLA---NSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 210 v~~~r~~l~~~~~~~~IiaKIE~~~-av~nideI~~---~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
+..+++.+.+.|.++.+..-=.+.+ -.+.++.+++ -.|||++.. +- .....+++.+.++|.||++
T Consensus 23 ~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~-~~----------~~~~~~~~~~~~~giPvV~ 91 (350)
T 3h75_A 23 SQFMQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVN-EQ----------YVAPQILRLSQGSGIKLFI 91 (350)
T ss_dssp HHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEEC-CS----------SHHHHHHHHHTTSCCEEEE
T ss_pred HHHHHHHHHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeC-ch----------hhHHHHHHHHHhCCCcEEE
Confidence 3444555556565544442112222 2456777777 589999964 21 1234567788899999987
Q ss_pred ee
Q 012335 286 AT 287 (466)
Q Consensus 286 AT 287 (466)
..
T Consensus 92 ~~ 93 (350)
T 3h75_A 92 VN 93 (350)
T ss_dssp EE
T ss_pred Ec
Confidence 44
No 366
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=23.36 E-value=3.8e+02 Score=25.92 Aligned_cols=45 Identities=22% Similarity=0.228 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHh----cCCcEEEEEcCCchHHHHHHhc--CCCCCEEEEEec
Q 012335 336 ESLASSAVRTANC----IKAALILVLTRGGTTAKMVSKY--RPSMPILSVIVP 382 (466)
Q Consensus 336 ~~ia~~av~~a~~----~~a~~Ivv~T~sG~ta~~vSk~--RP~~PIiAv~~~ 382 (466)
+..+...+..+.+ .+++.||+.| +|++++.+|.+ +-.+|.+.+ +|
T Consensus 57 ~Rga~~~i~~a~~~g~~~~~~~vv~~S-sGNhg~a~A~aa~~~G~~~~iv-~p 107 (346)
T 3l6b_A 57 IRGALNAVRSLVPDALERKPKAVVTHS-SGNHGQALTYAAKLEGIPAYIV-VP 107 (346)
T ss_dssp HHHHHHHHHTTC-----CCCSCEEEEC-SSHHHHHHHHHHHHTTCCEEEE-EE
T ss_pred HHHHHHHHHHHHHhccccCCCEEEEeC-CCHHHHHHHHHHHHhCCCEEEE-EC
Confidence 3444444544444 2566677776 78987765542 447787776 45
No 367
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=23.30 E-value=84 Score=30.70 Aligned_cols=60 Identities=22% Similarity=0.256 Sum_probs=43.8
Q ss_pred HHhcHHHHHhc--CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCC-CCCHHHHHhHHHhh
Q 012335 235 GVANFDDVLAN--SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSP-RPTRAEATDVANAA 311 (466)
Q Consensus 235 av~nideI~~~--sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p-~PTRAEvsDv~naa 311 (466)
...+++++++. .|.|+|+ .|... ...++.+|-++||+|++ +.| ..|.+|+..+..+|
T Consensus 53 ~~~~~~~ll~~~~vD~V~i~-------tp~~~----H~~~~~~al~aGkhVl~---------EKP~a~~~~ea~~l~~~a 112 (362)
T 3fhl_A 53 IVRSFKELTEDPEIDLIVVN-------TPDNT----HYEYAGMALEAGKNVVV---------EKPFTSTTKQGEELIALA 112 (362)
T ss_dssp EESCSHHHHTCTTCCEEEEC-------SCGGG----HHHHHHHHHHTTCEEEE---------ESSCCSSHHHHHHHHHHH
T ss_pred eECCHHHHhcCCCCCEEEEe-------CChHH----HHHHHHHHHHCCCeEEE---------ecCCCCCHHHHHHHHHHH
Confidence 34678899887 7999996 34322 34567788899999996 344 56889999998886
Q ss_pred hhh
Q 012335 312 ENF 314 (466)
Q Consensus 312 E~~ 314 (466)
++.
T Consensus 113 ~~~ 115 (362)
T 3fhl_A 113 KKK 115 (362)
T ss_dssp HHH
T ss_pred HHc
Confidence 653
No 368
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=23.30 E-value=1.1e+02 Score=30.39 Aligned_cols=55 Identities=13% Similarity=0.121 Sum_probs=36.0
Q ss_pred ceEEEeecCHHHHhcHHHHHh--cCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 224 ILLMSKVENLEGVANFDDVLA--NSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 224 ~~IiaKIE~~~av~nideI~~--~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
++|++ =|+....+.+.++++ .+|.|.+-..-.|- + .--.+++..|+++|.++.+-
T Consensus 251 ipIa~-dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG---i----t~~~~i~~~A~~~g~~~~~h 307 (392)
T 2poz_A 251 LPIAV-GERVYTRFGFRKIFELQACGIIQPDIGTAGG---L----METKKICAMAEAYNMRVAPH 307 (392)
T ss_dssp SCEEE-CTTCCHHHHHHHHHTTTCCSEECCCTTTSSC---H----HHHHHHHHHHHTTTCEECCC
T ss_pred CCEEe-cCCcCCHHHHHHHHHcCCCCEEecCccccCC---H----HHHHHHHHHHHHcCCeEecC
Confidence 44443 466666677777774 47888885544432 1 22357889999999997753
No 369
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=23.27 E-value=74 Score=32.13 Aligned_cols=51 Identities=12% Similarity=0.115 Sum_probs=32.3
Q ss_pred CHHHHHHHHHhCCceEEEecCC-------CCHH--HHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 23 SVEMAEKLLRAGMNVARFNFSH-------GSHA--YHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 23 ~~~~l~~li~~G~~v~RiN~sh-------g~~~--~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
+.+.++.|-++|+|++||-+++ +.+- ...+.++++=+.+.+.| +.+++||-
T Consensus 75 te~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~G--l~VILDlH 134 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNN--IRVWIDLH 134 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred cHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCC--CEEEEEec
Confidence 5788999999999999999863 2110 12234444444444555 46777863
No 370
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=23.27 E-value=2.1e+02 Score=22.01 Aligned_cols=58 Identities=7% Similarity=0.031 Sum_probs=33.1
Q ss_pred HHhcCCcEEEEEc----CCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 346 ANCIKAALILVLT----RGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 346 a~~~~a~~Ivv~T----~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
..+...+.|++=- .+|.. .+.+.+..|.+||+.++ . ..+..... -.+-.|+..++..+
T Consensus 43 ~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s------~-----~~~~~~~~-~~~~~g~~~~l~KP 105 (124)
T 1srr_A 43 VTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMT------A-----YGELDMIQ-ESKELGALTHFAKP 105 (124)
T ss_dssp HHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEE------S-----SCCHHHHH-HHHHHTCCCEEESS
T ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEE------c-----cCchHHHH-HHHhcChHhhccCC
Confidence 3444677766632 34543 45666668999999992 1 02222222 23345777777664
No 371
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=23.26 E-value=1.7e+02 Score=28.44 Aligned_cols=57 Identities=18% Similarity=0.261 Sum_probs=34.6
Q ss_pred eEEEEecCCCCCCHH----HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 012335 11 TKIVCTLGPASRSVE----MAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDT 74 (466)
Q Consensus 11 tkIi~TiGp~~~~~~----~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl 74 (466)
...-+|+|-. +++ ..+++.++|-+.+.+...| +.++-.+.++.+|++ |..+.|++|-
T Consensus 129 v~~~~~~~~~--~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~d~~~v~avr~~----g~~~~l~vDa 189 (345)
T 2zad_A 129 IETDKTVGID--TVENRVKEAKKIFEEGFRVIKIKVGE-NLKEDIEAVEEIAKV----TRGAKYIVDA 189 (345)
T ss_dssp EEBCEEECSC--CHHHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHH----STTCEEEEEC
T ss_pred eeeeEEecCC--CHHHHHHHHHHHHHcCcCEEEEeecC-CHHHHHHHHHHHHhh----CCCCeEEEEC
Confidence 3444566532 343 3466788999999999988 445444556666653 4334555554
No 372
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=23.24 E-value=1.9e+02 Score=27.19 Aligned_cols=72 Identities=15% Similarity=0.115 Sum_probs=47.2
Q ss_pred CCeEEEEec-----CCCCCC-HHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCc-eEEEecCCCCeeE
Q 012335 9 PKTKIVCTL-----GPASRS-VEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGIL-CAVMLDTKGPEIR 80 (466)
Q Consensus 9 r~tkIi~Ti-----Gp~~~~-~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~-i~i~~Dl~GpkiR 80 (466)
..+|||++- -|+..+ .+.+++|.+.|.|+.+|-.-=-+.++...+++..++..+....| +++-+--.|.--|
T Consensus 138 ~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDivKia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G~~SR 216 (257)
T 2yr1_A 138 CSVWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMGGLGAITR 216 (257)
T ss_dssp TTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECTTTTHHHH
T ss_pred CCCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEEEEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEECCCCcchHH
Confidence 469999986 233111 33456678899999999977777888888888777764444556 4555533344444
No 373
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=23.23 E-value=2.3e+02 Score=27.39 Aligned_cols=91 Identities=12% Similarity=-0.088 Sum_probs=50.2
Q ss_pred hccCcCCCcEEEEcCC-----------CC-------------hhhHHHHHHHHHhcCCCceEEE--eecCHHHHhcHHHH
Q 012335 189 NWGVPNKIDMIALSFV-----------RK-------------GSDLVEVRNLLRVHAKNILLMS--KVENLEGVANFDDV 242 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV-----------~s-------------a~dv~~~r~~l~~~~~~~~Iia--KIE~~~av~nideI 242 (466)
+.+.+.|+|+|.+|-- +. ...+..+.+.....+ +++||+ .|-+.+-+ ++.|
T Consensus 199 ~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~~d~--~kal 275 (332)
T 1vcf_A 199 LALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP-HLPLVASGGVYTGTDG--AKAL 275 (332)
T ss_dssp HHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS-SSCEEEESSCCSHHHH--HHHH
T ss_pred HHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC-CCeEEEECCCCCHHHH--HHHH
Confidence 4568899999999642 11 022333333333322 577877 66665444 3333
Q ss_pred HhcCCeeEEeCCcccCc-CCch----hHHHHHHHHHHHHHHcCCC
Q 012335 243 LANSDAFMVARGDLGME-IPIE----KIFLAQKVMIHKANIQGKP 282 (466)
Q Consensus 243 ~~~sDgImiaRgDLg~e-~~~e----~v~~~qk~ii~~~~~~gkP 282 (466)
..=+|++++||.=|-.. -+.+ .+..+.+.+-..+...|..
T Consensus 276 ~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~ 320 (332)
T 1vcf_A 276 ALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRTALFAIGAR 320 (332)
T ss_dssp HHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33489999999766321 1222 3334445555556666654
No 374
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=23.22 E-value=4e+02 Score=23.70 Aligned_cols=62 Identities=10% Similarity=0.028 Sum_probs=38.2
Q ss_pred HHHHHHhcCCcEEEEEc----CCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 342 AVRTANCIKAALILVLT----RGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 342 av~~a~~~~a~~Ivv~T----~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
|.+...+...++|++-- .+|.. ++.+-+..|.+||++++ . .+......-.+-.|+.-++..+
T Consensus 59 al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt------~------~~~~~~~~~~~~~Ga~~yl~Kp 125 (250)
T 3r0j_A 59 ALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLT------A------RDSLQDKIAGLTLGGDDYVTKP 125 (250)
T ss_dssp HHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEE------C------STTHHHHHHHHTSTTCEEEESS
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEE------C------CCCHHHHHHHHHcCCcEEEeCC
Confidence 33444555678776642 35554 45666677999999992 1 2333333345667999888875
No 375
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=23.22 E-value=29 Score=31.89 Aligned_cols=69 Identities=14% Similarity=0.106 Sum_probs=43.0
Q ss_pred cHHHHHhccCcCCCcEEEEc-----CCCChhhHHHHHHHHHhcCCCceEEEe--ecCHHHHhcHHHHHhc-CCeeEEeCC
Q 012335 183 DKEDILNWGVPNKIDMIALS-----FVRKGSDLVEVRNLLRVHAKNILLMSK--VENLEGVANFDDVLAN-SDAFMVARG 254 (466)
Q Consensus 183 D~~di~~~~~~~~~d~v~~s-----fV~sa~dv~~~r~~l~~~~~~~~IiaK--IE~~~av~nideI~~~-sDgImiaRg 254 (466)
|...+.+...+.|+|++.+. |...... ..++++.... ++++++. |.+++ .+++.+++ +|+|++++.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~---~~~~~l~~Gad~V~lg~~ 105 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKL--DVQVELSGGIRDDE---SLAAALATGCARVNVGTA 105 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhc--CCcEEEECCCCCHH---HHHHHHHcCCCEEEECch
Confidence 33333355577899999883 6665544 4555544332 4677764 56654 35666665 899999977
Q ss_pred ccc
Q 012335 255 DLG 257 (466)
Q Consensus 255 DLg 257 (466)
.|.
T Consensus 106 ~l~ 108 (244)
T 2y88_A 106 ALE 108 (244)
T ss_dssp HHH
T ss_pred Hhh
Confidence 653
No 376
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=23.22 E-value=3.5e+02 Score=25.08 Aligned_cols=78 Identities=12% Similarity=0.161 Sum_probs=51.5
Q ss_pred cEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHH
Q 012335 197 DMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKA 276 (466)
Q Consensus 197 d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~ 276 (466)
-.|.+=...++++...+-+.|-+.|-. .|-.-.-++.+++.+.+|.+..+.+.||-|-. +..+ =.+.|
T Consensus 35 ~vv~Vir~~~~~~a~~~a~al~~gGi~-~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTV---lt~~--------~a~~A 102 (232)
T 4e38_A 35 KVIPVIAIDNAEDIIPLGKVLAENGLP-AAEITFRSDAAVEAIRLLRQAQPEMLIGAGTI---LNGE--------QALAA 102 (232)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCC-EEEEETTSTTHHHHHHHHHHHCTTCEEEEECC---CSHH--------HHHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHCCCC-EEEEeCCCCCHHHHHHHHHHhCCCCEEeECCc---CCHH--------HHHHH
Confidence 346666778888888887777665532 33345668888989998888766677776632 2222 24556
Q ss_pred HHcCCCeEEe
Q 012335 277 NIQGKPVVTA 286 (466)
Q Consensus 277 ~~~gkPvi~A 286 (466)
.++|--.++.
T Consensus 103 i~AGA~fIvs 112 (232)
T 4e38_A 103 KEAGATFVVS 112 (232)
T ss_dssp HHHTCSEEEC
T ss_pred HHcCCCEEEe
Confidence 6677777763
No 377
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=23.20 E-value=45 Score=33.80 Aligned_cols=32 Identities=25% Similarity=0.272 Sum_probs=28.2
Q ss_pred hcCCcEEEEEcCCchHHHHHHh----cCCCCCEEEE
Q 012335 348 CIKAALILVLTRGGTTAKMVSK----YRPSMPILSV 379 (466)
Q Consensus 348 ~~~a~~Ivv~T~sG~ta~~vSk----~RP~~PIiAv 379 (466)
+..++.+++-|.+|+||..+|. ..|.++.+.+
T Consensus 226 ~~~~DGliVsTPTGSTAYslSAGGpIv~P~~~~~~l 261 (388)
T 3afo_A 226 RTTADGVALATPTGSTAYSLSAGGSIVSPLVPAILM 261 (388)
T ss_dssp EEEEEEEEEECTGGGGTHHHHTTCCEECTTSCEEEE
T ss_pred eecCCeEEEeCCCcHHHHHHhccCCcccCCCCceEE
Confidence 3578999999999999999998 5788888888
No 378
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=23.15 E-value=2.6e+02 Score=21.76 Aligned_cols=61 Identities=7% Similarity=0.011 Sum_probs=34.1
Q ss_pred HHHHHhcCCcEEEEEc---------CCch-HHHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEE
Q 012335 343 VRTANCIKAALILVLT---------RGGT-TAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVL 412 (466)
Q Consensus 343 v~~a~~~~a~~Ivv~T---------~sG~-ta~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l 412 (466)
.....+...++|++-. .+|. ..+.+.+..|.+||++++. ........-.+-.|+.-++
T Consensus 40 ~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~------------~~~~~~~~~~~~~g~~~~l 107 (140)
T 2qr3_A 40 STVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTA------------YADIDLAVRGIKEGASDFV 107 (140)
T ss_dssp HHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEE------------GGGHHHHHHHHHTTCCEEE
T ss_pred HHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEEC------------CCCHHHHHHHHHcCchhee
Confidence 3344455677666643 2333 2456666789999999921 1111122233455888777
Q ss_pred cCC
Q 012335 413 SSG 415 (466)
Q Consensus 413 ~~~ 415 (466)
..+
T Consensus 108 ~kp 110 (140)
T 2qr3_A 108 VKP 110 (140)
T ss_dssp EES
T ss_pred eCC
Confidence 764
No 379
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=23.14 E-value=91 Score=29.79 Aligned_cols=47 Identities=21% Similarity=0.275 Sum_probs=36.2
Q ss_pred HHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 235 GVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 235 av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
+.+-.+|+.+.+|++.|.-|-|. ++....+...++.+++.|+|+++-
T Consensus 46 ~~~E~~e~~~~a~al~iNiGtl~-----~~~~~~m~~A~~~A~~~~~PvVLD 92 (265)
T 3hpd_A 46 AEEELEEMIRLADAVVINIGTLD-----SGWRRSMVKATEIANELGKPIVLD 92 (265)
T ss_dssp CTTTHHHHHHHCSEEEEECTTCC-----HHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHCCeEEEECCCCC-----hHHHHHHHHHHHHHHHcCCCEEEc
Confidence 44568899999999999866653 344555667778999999999875
No 380
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=22.98 E-value=2.1e+02 Score=28.04 Aligned_cols=10 Identities=10% Similarity=-0.167 Sum_probs=5.5
Q ss_pred HHHcCCceEE
Q 012335 61 MNNTGILCAV 70 (466)
Q Consensus 61 ~~~~~~~i~i 70 (466)
.+..|.|+.=
T Consensus 113 gk~~g~Pl~~ 122 (382)
T 1rvk_A 113 GRSLGQPVYK 122 (382)
T ss_dssp HHHHTCBHHH
T ss_pred HhHhCCCHHH
Confidence 4455666553
No 381
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=22.97 E-value=4.1e+02 Score=23.76 Aligned_cols=36 Identities=17% Similarity=0.087 Sum_probs=27.4
Q ss_pred hccCcCCCcEEEEcCC------CChhhHHHHHHHHHhcCCCc
Q 012335 189 NWGVPNKIDMIALSFV------RKGSDLVEVRNLLRVHAKNI 224 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV------~sa~dv~~~r~~l~~~~~~~ 224 (466)
+.+.+.|+|+|-+..- .+..++.++++.+.+.|-.+
T Consensus 26 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 67 (272)
T 2q02_A 26 RLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEI 67 (272)
T ss_dssp HHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEE
T ss_pred HHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeE
Confidence 6778999999988742 14578999999998876433
No 382
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=22.93 E-value=2.5e+02 Score=26.08 Aligned_cols=29 Identities=17% Similarity=0.246 Sum_probs=23.2
Q ss_pred CCcEEEEEcC---------CchHHHHHHhcCCCCCEEEE
Q 012335 350 KAALILVLTR---------GGTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 350 ~a~~Ivv~T~---------sG~ta~~vSk~RP~~PIiAv 379 (466)
++++||+-++ -|+++..+.+.- .|||+.+
T Consensus 122 ~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~-~~PVlvv 159 (309)
T 3cis_A 122 DAVLMVVGCLGSGRWPGRLLGSVSSGLLRHA-HCPVVII 159 (309)
T ss_dssp GEEEEEEESSCTTCCTTCCSCHHHHHHHHHC-SSCEEEE
T ss_pred CCCEEEECCCCCccccccccCcHHHHHHHhC-CCCEEEE
Confidence 7898888775 367788887776 5999999
No 383
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=22.72 E-value=1e+02 Score=27.21 Aligned_cols=64 Identities=17% Similarity=0.209 Sum_probs=39.5
Q ss_pred ccCcCCCcEEEEcCC--C------ChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc-CCeeEEeCCccc
Q 012335 190 WGVPNKIDMIALSFV--R------KGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN-SDAFMVARGDLG 257 (466)
Q Consensus 190 ~~~~~~~d~v~~sfV--~------sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~-sDgImiaRgDLg 257 (466)
.+.+.|+|+|.++-+ . ...+...++++.... ++++++- =-.. .+|+.++++. +||+.++++=+.
T Consensus 123 ~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~pvia~-GGI~-~~nv~~~~~~Ga~gv~vgs~i~~ 195 (215)
T 1xi3_A 123 EAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV--KIPVVAI-GGIN-KDNAREVLKTGVDGIAVISAVMG 195 (215)
T ss_dssp HHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC--SSCEEEE-SSCC-TTTHHHHHTTTCSEEEESHHHHT
T ss_pred HHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC--CCCEEEE-CCcC-HHHHHHHHHcCCCEEEEhHHHhC
Confidence 456789999998532 1 234566666654433 4555552 1111 4688888776 899999986544
No 384
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=22.65 E-value=1.7e+02 Score=27.12 Aligned_cols=64 Identities=6% Similarity=0.038 Sum_probs=43.0
Q ss_pred CCeEEEEec-----CCCCCC-HHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCc-eEEEe
Q 012335 9 PKTKIVCTL-----GPASRS-VEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGIL-CAVML 72 (466)
Q Consensus 9 r~tkIi~Ti-----Gp~~~~-~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~-i~i~~ 72 (466)
..+|||++- -|+..+ .+.+++|.+.|.|+.+|-.-=-+.++...+++..++..+....| +++-+
T Consensus 124 ~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~M 194 (238)
T 1sfl_A 124 YNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISM 194 (238)
T ss_dssp TTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred cCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHHHhhcCCCCEEEEEC
Confidence 469999986 233111 23355677799999999977777888888887777764445566 44444
No 385
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=22.63 E-value=2.7e+02 Score=21.53 Aligned_cols=61 Identities=8% Similarity=-0.013 Sum_probs=33.1
Q ss_pred HHHHHHhcCCcEEEEEc----CCchH-HHHHHhc--CCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcC
Q 012335 342 AVRTANCIKAALILVLT----RGGTT-AKMVSKY--RPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSS 414 (466)
Q Consensus 342 av~~a~~~~a~~Ivv~T----~sG~t-a~~vSk~--RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~ 414 (466)
|.+...+...++|++-. .+|.. .+.+.+. .|.+||++++ . ...... ...+..|+.-++..
T Consensus 39 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s------~------~~~~~~-~~~~~~g~~~~l~K 105 (133)
T 3nhm_A 39 GLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVS------G------YAPRTE-GPADQPVPDAYLVK 105 (133)
T ss_dssp HHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEE------S------CCC------TTSCCCSEEEES
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEe------C------CCcHhH-HHHhhcCCceEEec
Confidence 33444556778766643 34443 3445444 4689999992 1 122222 44566788888776
Q ss_pred C
Q 012335 415 G 415 (466)
Q Consensus 415 ~ 415 (466)
+
T Consensus 106 P 106 (133)
T 3nhm_A 106 P 106 (133)
T ss_dssp S
T ss_pred c
Confidence 5
No 386
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=22.62 E-value=2.8e+02 Score=27.83 Aligned_cols=90 Identities=10% Similarity=0.186 Sum_probs=62.5
Q ss_pred HHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEee-cCHHHHhcHHHHHhcCCeeEEeCCcccCcCCc
Q 012335 184 KEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKV-ENLEGVANFDDVLANSDAFMVARGDLGMEIPI 262 (466)
Q Consensus 184 ~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKI-E~~~av~nideI~~~sDgImiaRgDLg~e~~~ 262 (466)
.+.| ....+.|+|.|=++. .+.++.+.++.+-.. .+++++|-| -++.-. +..+-.-+|.+=|.+|.+|- .
T Consensus 49 v~Qi-~~l~~aG~diVRvav-p~~~~a~al~~I~~~--~~vPlvaDiHf~~~la--l~a~e~G~dklRINPGNig~---~ 119 (366)
T 3noy_A 49 LNQI-KRLYEAGCEIVRVAV-PHKEDVEALEEIVKK--SPMPVIADIHFAPSYA--FLSMEKGVHGIRINPGNIGK---E 119 (366)
T ss_dssp HHHH-HHHHHTTCCEEEEEC-CSHHHHHHHHHHHHH--CSSCEEEECCSCHHHH--HHHHHTTCSEEEECHHHHSC---H
T ss_pred HHHH-HHHHHcCCCEEEeCC-CChHHHHHHHHHHhc--CCCCEEEeCCCCHHHH--HHHHHhCCCeEEECCcccCc---h
Confidence 3444 445689999998885 557777777766554 468999998 343222 12222238999999999984 2
Q ss_pred hhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 263 EKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 263 e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
++ -+.++..|+++|+|+=+-
T Consensus 120 ~~----~~~vv~~ak~~~~piRIG 139 (366)
T 3noy_A 120 EI----VREIVEEAKRRGVAVRIG 139 (366)
T ss_dssp HH----HHHHHHHHHHHTCEEEEE
T ss_pred hH----HHHHHHHHHHcCCCEEEe
Confidence 33 367999999999997664
No 387
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=22.59 E-value=1.8e+02 Score=27.68 Aligned_cols=59 Identities=25% Similarity=0.318 Sum_probs=42.5
Q ss_pred HHhcHHHHHh--cCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCC-CCCHHHHHhHHHhh
Q 012335 235 GVANFDDVLA--NSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSP-RPTRAEATDVANAA 311 (466)
Q Consensus 235 av~nideI~~--~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p-~PTRAEvsDv~naa 311 (466)
...+++++++ ..|.|+|+ .|... ...++..|-++||+|++- +| ..|.+|...+..+|
T Consensus 55 ~~~~~~~ll~~~~~D~V~i~-------tp~~~----h~~~~~~al~aGk~Vl~E---------KP~a~~~~e~~~l~~~a 114 (329)
T 3evn_A 55 AYDKLEDMLADESIDVIYVA-------TINQD----HYKVAKAALLAGKHVLVE---------KPFTLTYDQANELFALA 114 (329)
T ss_dssp EESCHHHHHTCTTCCEEEEC-------SCGGG----HHHHHHHHHHTTCEEEEE---------SSCCSSHHHHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEEC-------CCcHH----HHHHHHHHHHCCCeEEEc---------cCCcCCHHHHHHHHHHH
Confidence 4567899998 57999996 34332 245566788999999863 33 56788888888886
Q ss_pred hh
Q 012335 312 EN 313 (466)
Q Consensus 312 E~ 313 (466)
++
T Consensus 115 ~~ 116 (329)
T 3evn_A 115 ES 116 (329)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 388
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=22.59 E-value=4.2e+02 Score=24.95 Aligned_cols=70 Identities=16% Similarity=0.158 Sum_probs=37.9
Q ss_pred cCCCCEEEEeCC---eEEEEEEEEecCCCeEEEEEeeCeEecCCCccccCCccc--CCCCCChhcHHHHHhccCcCCCcE
Q 012335 124 LRPGSVILCSDG---TISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIV--DLPTLTEKDKEDILNWGVPNKIDM 198 (466)
Q Consensus 124 v~~Gd~i~iddG---~i~l~V~~v~~~~~~i~~~v~~gG~l~~~Kgvnlp~~~~--~lp~lte~D~~di~~~~~~~~~d~ 198 (466)
+++||.|.+-|| ....+|.+++ .+.+.+++..--....... +...+ .+|. .++....| +.+.+.|++-
T Consensus 37 l~~Gd~i~l~dg~G~~~~a~I~~~~--~~~~~~~i~~~~~~~~e~~---~~v~L~~al~K-~~r~e~il-qkatELGV~~ 109 (268)
T 1vhk_A 37 MNEGDQIICCSQDGFEAKCELQSVS--KDKVSCLVIEWTNENRELP---IKVYIASGLPK-GDKLEWII-QKGTELGAHA 109 (268)
T ss_dssp CCTTCEEEEECTTSCEEEEEEEEEC--SSEEEEEEEEECCCCCCCS---SEEEEEEECCS-TTHHHHHH-HHHHHTTCCE
T ss_pred CCCCCEEEEEeCCCCEEEEEEEEec--CCEEEEEEEEEeccCCCCC---ccEEEEEeeec-CccHHHHH-HHHHHhCcCE
Confidence 678999998664 4556677774 5567666543211101000 01111 2232 23433445 7899999996
Q ss_pred EE
Q 012335 199 IA 200 (466)
Q Consensus 199 v~ 200 (466)
|.
T Consensus 110 I~ 111 (268)
T 1vhk_A 110 FI 111 (268)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 389
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=22.53 E-value=3.1e+02 Score=26.47 Aligned_cols=68 Identities=16% Similarity=0.171 Sum_probs=45.9
Q ss_pred CCeEEEEecCCCC--CC-----------HHHHHHHHHhCCceEEEecCC--------CCHHHHHHHHHHHHHHHHHcCCc
Q 012335 9 PKTKIVCTLGPAS--RS-----------VEMAEKLLRAGMNVARFNFSH--------GSHAYHQETLDNLRTAMNNTGIL 67 (466)
Q Consensus 9 r~tkIi~TiGp~~--~~-----------~~~l~~li~~G~~v~RiN~sh--------g~~~~~~~~i~~ir~~~~~~~~~ 67 (466)
.+++|++=+.-.- .+ .+..++|++.|+++.=+|.-- ...|+..+++..++...++.+.|
T Consensus 38 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vp 117 (297)
T 1tx2_A 38 EKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLP 117 (297)
T ss_dssp SSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSC
T ss_pred CCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCce
Confidence 3688888874332 21 235677999999999999732 12577778887777777666655
Q ss_pred eEEEecCCCCe
Q 012335 68 CAVMLDTKGPE 78 (466)
Q Consensus 68 i~i~~Dl~Gpk 78 (466)
|.+|+.-|+
T Consensus 118 --iSIDT~~~~ 126 (297)
T 1tx2_A 118 --ISIDTYKAE 126 (297)
T ss_dssp --EEEECSCHH
T ss_pred --EEEeCCCHH
Confidence 455776444
No 390
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=22.51 E-value=1.8e+02 Score=28.79 Aligned_cols=54 Identities=26% Similarity=0.173 Sum_probs=33.0
Q ss_pred ceEEEeecCHHHHhcHHHHHh--cCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 224 ILLMSKVENLEGVANFDDVLA--NSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 224 ~~IiaKIE~~~av~nideI~~--~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
++|++ =|+....+.+.++++ .+|.|.+-..-.|- ..--.+|+..|+++|.++.+
T Consensus 261 iPIa~-dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG-------ite~~~i~~~A~~~g~~~~~ 316 (403)
T 2ox4_A 261 IPLAS-GERIYSRWGFLPFLEDRSIDVIQPDLGTCGG-------FTEFKKIADMAHIFEVTVQA 316 (403)
T ss_dssp SCEEE-CTTCCHHHHHHHHHHTTCCSEECCCHHHHTH-------HHHHHHHHHHHHHTTCEECC
T ss_pred CCEEe-cCCcCCHHHHHHHHHcCCCCEEecCccccCC-------HHHHHHHHHHHHHcCCEEee
Confidence 44443 455555666666664 37888774322221 12236789999999999775
No 391
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=22.43 E-value=1.2e+02 Score=30.47 Aligned_cols=49 Identities=24% Similarity=0.354 Sum_probs=36.0
Q ss_pred EecCCCCCCHHHHHHHHHhCC---------------ceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 012335 15 CTLGPASRSVEMAEKLLRAGM---------------NVARFNFSHGSHAYHQETLDNLRTAMNN 63 (466)
Q Consensus 15 ~TiGp~~~~~~~l~~li~~G~---------------~v~RiN~shg~~~~~~~~i~~ir~~~~~ 63 (466)
..+.+..+..+..+.|++.|+ +.+||+|++-+.++..+.++.++++.++
T Consensus 381 v~~~~~~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 381 VTLPDGIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKE 444 (448)
T ss_dssp EECSTTCCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 344332344567788888774 3589999988889999999999887653
No 392
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=22.41 E-value=3.2e+02 Score=24.55 Aligned_cols=31 Identities=32% Similarity=0.509 Sum_probs=24.1
Q ss_pred hcCCcEEEEEcCC----------chHHHHHHhcCCCCCEEEE
Q 012335 348 CIKAALILVLTRG----------GTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 348 ~~~a~~Ivv~T~s----------G~ta~~vSk~RP~~PIiAv 379 (466)
+.+++.||+-++. |+++..+.+.-| |||+.+
T Consensus 107 ~~~~dliV~G~~g~~~~~~~~~~Gs~~~~v~~~a~-~PVlvv 147 (268)
T 3ab8_A 107 ARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASP-VPVLLA 147 (268)
T ss_dssp HTTCSEEEEESSCTTSCTTCCSCCHHHHHHHHHCS-SCEEEE
T ss_pred ccCCCEEEEeccCCCccccccccchhHHHHHHhCC-CCEEEE
Confidence 6789999888752 457788877765 999998
No 393
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=22.31 E-value=1.9e+02 Score=28.78 Aligned_cols=54 Identities=19% Similarity=0.083 Sum_probs=35.0
Q ss_pred ceEEEeecCHHHHhcHHHHHh--cCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 224 ILLMSKVENLEGVANFDDVLA--NSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 224 ~~IiaKIE~~~av~nideI~~--~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
++|++ =|+....+.+.++++ .+|.|.+-..-.|- + .--++|+..|+++|.++.+
T Consensus 267 iPIa~-dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG------i-te~~~i~~~A~~~g~~~~~ 322 (407)
T 2o56_A 267 IPLAA-GERIYWRWGYRPFLENGSLSVIQPDICTCGG------I-TEVKKICDMAHVYDKTVQI 322 (407)
T ss_dssp SCEEE-CTTCCHHHHHHHHHHTTCCSEECCCTTTTTH------H-HHHHHHHHHHHTTTCEECC
T ss_pred CCEEe-CCCcCCHHHHHHHHHcCCCCEEecCccccCC------H-HHHHHHHHHHHHcCCeEee
Confidence 44443 466666667777774 37888876544432 1 2235788899999999765
No 394
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=22.31 E-value=2.9e+02 Score=23.88 Aligned_cols=82 Identities=13% Similarity=0.225 Sum_probs=42.4
Q ss_pred HHHHHHHHcCCceEEEecCC----CCeeEeeecCCCCcEEec---CCCEEEEEeCCCCCC--CccEEeecch---hhhhc
Q 012335 56 NLRTAMNNTGILCAVMLDTK----GPEIRTGFLKDGKPIQLV---QGQEITISTDYSLKG--DEKMISMSYK---KLAED 123 (466)
Q Consensus 56 ~ir~~~~~~~~~i~i~~Dl~----GpkiR~g~~~~~~~i~l~---~G~~v~l~~~~~~~~--~~~~i~v~~~---~~~~~ 123 (466)
.|++..+.+.. +-.+|.. ..+++.| ..+.|+ .|++.+++.-..... ....|++..| .|+ .
T Consensus 61 ri~~Le~~L~~--a~vid~~~~~~~~~V~~G-----s~V~l~~~~~~~~~~y~iVg~~ead~~~~~IS~~SPlG~ALl-G 132 (158)
T 1grj_A 61 RIKDIEAKLSN--AQVIDVTKMPNNGRVIFG-----ATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLI-G 132 (158)
T ss_dssp HHHHHHHHHHH--EEEECGGGSCCCSBCCTT-----CEEEEEETTTTEEEEEEEECTTTCBGGGTEEESSSHHHHHHT-T
T ss_pred HHHHHHHHHhh--CeecCccccCCCCEEEeC-----cEEEEEECCCCCEEEEEEECHHHhCCcCCEEcCCCHHHHHHc-C
Confidence 45555555432 4445543 2234443 345554 455544443222222 2356777654 333 3
Q ss_pred cCCCCEEEEe--CCeEEEEEEEEe
Q 012335 124 LRPGSVILCS--DGTISLTVLDCA 145 (466)
Q Consensus 124 v~~Gd~i~id--dG~i~l~V~~v~ 145 (466)
-++||.|.+. +|...++|++|.
T Consensus 133 k~~GD~v~v~~p~G~~~~~I~~I~ 156 (158)
T 1grj_A 133 KEEDDVVVIKTPGGEVEFEVIKVE 156 (158)
T ss_dssp CBTTCEECC------CCEEEEEEE
T ss_pred CCCCCEEEEEcCCCcEEEEEEEEE
Confidence 5899999887 788888888773
No 395
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=22.30 E-value=81 Score=31.76 Aligned_cols=51 Identities=16% Similarity=0.182 Sum_probs=31.8
Q ss_pred CHHHHHHHHHhCCceEEEecCC-------CCH---HHHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 23 SVEMAEKLLRAGMNVARFNFSH-------GSH---AYHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 23 ~~~~l~~li~~G~~v~RiN~sh-------g~~---~~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
+.+.++.|-++|+|++||-++. |++ ....+.++.+=+.+++.| +.+++|+-
T Consensus 75 te~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~G--i~VilDlH 135 (408)
T 1h4p_A 75 QEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNS--LKVWVDLH 135 (408)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCC--CEEEEECC
Confidence 4678999999999999998752 111 113334444334444555 45777775
No 396
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=22.22 E-value=3.2e+02 Score=24.64 Aligned_cols=31 Identities=29% Similarity=0.376 Sum_probs=19.0
Q ss_pred CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 012335 246 SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTA 286 (466)
Q Consensus 246 sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~A 286 (466)
.|||++...|- ......+..+.+.|.|+++.
T Consensus 62 vdgiIi~~~~~----------~~~~~~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 62 PDAIIEQLGNL----------DVLNPWLQKINDAGIPLFTV 92 (291)
T ss_dssp CSEEEEESSCH----------HHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEeCCCh----------hhhHHHHHHHHHCCCcEEEe
Confidence 68888764431 12334566677778887754
No 397
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=22.18 E-value=1.4e+02 Score=29.94 Aligned_cols=49 Identities=18% Similarity=0.165 Sum_probs=30.9
Q ss_pred HHHHHHHHhCCceEEEecCCCC------------------HHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 25 EMAEKLLRAGMNVARFNFSHGS------------------HAYHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 25 ~~l~~li~~G~~v~RiN~shg~------------------~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
+.|+.|-+.|+|++|+-|+.+. .++..+.++.+=..+++.|. -+++||-
T Consensus 66 ~dl~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~Gi--~vil~l~ 132 (440)
T 1uuq_A 66 KELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDM--TVVLYFN 132 (440)
T ss_dssp HHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTC--EEEEECC
T ss_pred HHHHHHHHcCCCEEEECcccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCCC--EEEEEcc
Confidence 5677788999999999854221 13334455555555667775 4555654
No 398
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=22.04 E-value=1.6e+02 Score=28.40 Aligned_cols=50 Identities=26% Similarity=0.302 Sum_probs=30.1
Q ss_pred HHHHHHHHHhCCceEEEe-cCCCC----------H-HHHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 24 VEMAEKLLRAGMNVARFN-FSHGS----------H-AYHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 24 ~~~l~~li~~G~~v~RiN-~shg~----------~-~~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
.+.++.|-+.|+|++|+- |+++. + +...+.++.+=+.+++.|. .+++||-
T Consensus 45 ~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~Gi--~vil~l~ 106 (373)
T 1rh9_A 45 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGI--HLIMSLV 106 (373)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTC--EEEEECC
T ss_pred HHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCCC--EEEEEec
Confidence 456778889999999996 44431 1 2223344444445566664 4566664
No 399
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=21.95 E-value=2.4e+02 Score=22.04 Aligned_cols=59 Identities=10% Similarity=-0.020 Sum_probs=34.4
Q ss_pred HHHhcCCcEEEEEc----CCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 345 TANCIKAALILVLT----RGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 345 ~a~~~~a~~Ivv~T----~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
...+...++|++-. .+|.. .+.+.+..|.+||+++ |. ........-.+..|+.-++..+
T Consensus 46 ~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~------s~------~~~~~~~~~~~~~g~~~~l~kP 109 (137)
T 3hdg_A 46 LFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVI------SA------FSEMKYFIKAIELGVHLFLPKP 109 (137)
T ss_dssp HHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEEC------CC------CCCHHHHHHHHHHCCSEECCSS
T ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEE------ec------CcChHHHHHHHhCCcceeEcCC
Confidence 33445677666643 24443 4567677899999999 21 2222223334566888877765
No 400
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=21.92 E-value=1.3e+02 Score=26.49 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=26.6
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCC
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKN 223 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~ 223 (466)
+.+.+.|+|+|.++.-...+.+.++++.+.+.|..
T Consensus 71 ~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~ 105 (207)
T 3ajx_A 71 DIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKG 105 (207)
T ss_dssp HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE
T ss_pred HHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCc
Confidence 34577999999987666667888888888776644
No 401
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=21.88 E-value=3.5e+02 Score=24.47 Aligned_cols=57 Identities=12% Similarity=0.186 Sum_probs=35.2
Q ss_pred HhcCCcEEEEE----cCCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 347 NCIKAALILVL----TRGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 347 ~~~~a~~Ivv~----T~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
.+...++|++= ..+|.. ++.+-+..|.+||++++ . ......+.-.+-.|+.-++..+
T Consensus 170 ~~~~~dlvl~D~~mp~~~G~~l~~~ir~~~~~~piI~lt------~------~~~~~~~~~~~~~G~~~~l~KP 231 (254)
T 2ayx_A 170 SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVT------A------NALAEEKQRCLESGMDSCLSKP 231 (254)
T ss_dssp HHSCCSEEEEEESSCSSCCHHHHHHHHHHHCCSCEEEEE------S------STTSHHHHHHHHCCCEEEEESS
T ss_pred HhCCCCEEEEcCCCCCCCHHHHHHHHHhcCCCCcEEEEE------C------CCCHHHHHHHHHcCCceEEECC
Confidence 34456766653 346764 46666667899999992 1 2222233344567999888875
No 402
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=21.84 E-value=87 Score=29.57 Aligned_cols=60 Identities=12% Similarity=0.031 Sum_probs=37.3
Q ss_pred eEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCC-HH-HHHHHHHHHHHHHHHcCCceEEEe
Q 012335 11 TKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGS-HA-YHQETLDNLRTAMNNTGILCAVML 72 (466)
Q Consensus 11 tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~-~~-~~~~~i~~ir~~~~~~~~~i~i~~ 72 (466)
-.=++++-|. ...+.|+++.+.|+..+|+|..... .+ +...+...+ +.++++|.|+.|-.
T Consensus 96 ~~g~~~v~P~-~~~~eL~~l~~~gv~Gi~l~~~~~~~~~~~~~~~~~~~-~~a~~~glpv~iH~ 157 (294)
T 4i6k_A 96 LKGIAVVQHT-TTFNELVNLKAQGIVGVRLNLFGLNLPALNTPDWQKFL-RNVESLNWQVELHA 157 (294)
T ss_dssp EEEEECCCTT-CCHHHHHHHHTTTEEEEEEECTTSCCCCSSSHHHHHHH-HHHHHTTCEEEEEC
T ss_pred EEEEEEeCCc-ccHHHHHHHHHCCCcEEEeccCCCCCCCcccHHHHHHH-HHHHHcCCEEEEee
Confidence 3445667674 4578899999999999999984321 12 122333333 34456788876654
No 403
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=21.80 E-value=3.2e+02 Score=23.50 Aligned_cols=61 Identities=18% Similarity=0.124 Sum_probs=35.8
Q ss_pred HHHHHhcCCcEEEEEc----CCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 343 VRTANCIKAALILVLT----RGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 343 v~~a~~~~a~~Ivv~T----~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
.....+...+.|++=- .+|.. .+.+-+..|.+||+.++. ..+... ..-.+-.|+.-++..+
T Consensus 44 l~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~-----------~~~~~~-~~~~~~~Ga~~~l~Kp 109 (215)
T 1a04_A 44 IELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSV-----------SNHEED-VVTALKRGADGYLLKD 109 (215)
T ss_dssp HHHHHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEEC-----------CCCHHH-HHHHHHTTCSEEEETT
T ss_pred HHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEEC-----------CCCHHH-HHHHHHcCCcEEEeCC
Confidence 3344455677666532 35553 456666678999999921 022222 2334456888888765
No 404
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=21.79 E-value=73 Score=31.93 Aligned_cols=69 Identities=12% Similarity=-0.016 Sum_probs=0.0
Q ss_pred CChhcHHHHHhccCcCCCcEEEEcC--------CCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc--CCe
Q 012335 179 LTEKDKEDILNWGVPNKIDMIALSF--------VRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN--SDA 248 (466)
Q Consensus 179 lte~D~~di~~~~~~~~~d~v~~sf--------V~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~--sDg 248 (466)
.+..+...+.+...+.|+|+|.++- ....+-+..+|+.+ ++.||+ ..... .+..+++++. +|+
T Consensus 252 ~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~-----~iPvi~-~Ggi~-~~~a~~~l~~g~aD~ 324 (377)
T 2r14_A 252 EPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRF-----KGGLIY-CGNYD-AGRAQARLDDNTADA 324 (377)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHC-----CSEEEE-ESSCC-HHHHHHHHHTTSCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHC-----CCCEEE-ECCCC-HHHHHHHHHCCCceE
Q ss_pred eEEeCC
Q 012335 249 FMVARG 254 (466)
Q Consensus 249 ImiaRg 254 (466)
|++||+
T Consensus 325 V~igR~ 330 (377)
T 2r14_A 325 VAFGRP 330 (377)
T ss_dssp EEESHH
T ss_pred EeecHH
No 405
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=21.75 E-value=89 Score=31.10 Aligned_cols=99 Identities=14% Similarity=0.066 Sum_probs=0.0
Q ss_pred CCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHH--hcCCeeEEeCCc
Q 012335 178 TLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVL--ANSDAFMVARGD 255 (466)
Q Consensus 178 ~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~--~~sDgImiaRgD 255 (466)
.++..+...+.+...+.++ +|=-|+- +.++..++++.+ .++|++ =|+......+.+++ ..+|.|++.++-
T Consensus 199 ~~~~~~a~~~~~~l~~~~i-~iEqP~~-~~~~~~~l~~~~-----~iPIa~-dE~~~~~~~~~~~l~~~~~d~v~ik~~~ 270 (378)
T 3eez_A 199 GWTRQQALRVMRATEDLHV-MFEQPGE-TLDDIAAIRPLH-----SAPVSV-DECLVTLQDAARVARDGLAEVFGIKLNR 270 (378)
T ss_dssp CCCHHHHHHHHHHTGGGTC-CEECCSS-SHHHHHHTGGGC-----CCCEEE-CTTCCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred CCCHHHHHHHHHHhccCCe-EEecCCC-CHHHHHHHHhhC-----CCCEEE-CCCCCCHHHHHHHHHcCCCCEEEeCchh
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHh
Q 012335 256 LGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLES 292 (466)
Q Consensus 256 Lg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeS 292 (466)
+|- ..--++|...|+++|.++.+ ..|+||
T Consensus 271 ~GG-------it~~~~ia~~A~~~g~~~~~-~~~~es 299 (378)
T 3eez_A 271 VGG-------LTRAARMRDIALTHGIDMFV-MATGGS 299 (378)
T ss_dssp HTS-------HHHHHHHHHHHHHTTCEEEE-ECSSCS
T ss_pred cCC-------HHHHHHHHHHHHHcCCEEEc-CCCCCC
No 406
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=21.69 E-value=1.3e+02 Score=28.96 Aligned_cols=59 Identities=20% Similarity=0.274 Sum_probs=42.7
Q ss_pred HHhcHHHHHh--cCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCC-CCCHHHHHhHHHhh
Q 012335 235 GVANFDDVLA--NSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSP-RPTRAEATDVANAA 311 (466)
Q Consensus 235 av~nideI~~--~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p-~PTRAEvsDv~naa 311 (466)
...+++++++ ..|.|+|+ .|... ...++..|-++||+|++- +| ..|.+|...+..++
T Consensus 55 ~~~~~~~ll~~~~~D~V~i~-------tp~~~----h~~~~~~al~~gk~vl~E---------KP~~~~~~e~~~l~~~a 114 (330)
T 3e9m_A 55 AYGSYEELCKDETIDIIYIP-------TYNQG----HYSAAKLALSQGKPVLLE---------KPFTLNAAEAEELFAIA 114 (330)
T ss_dssp CBSSHHHHHHCTTCSEEEEC-------CCGGG----HHHHHHHHHHTTCCEEEC---------SSCCSSHHHHHHHHHHH
T ss_pred eeCCHHHHhcCCCCCEEEEc-------CCCHH----HHHHHHHHHHCCCeEEEe---------CCCCCCHHHHHHHHHHH
Confidence 4567889987 57999996 44432 244566788999999863 34 56888998888886
Q ss_pred hh
Q 012335 312 EN 313 (466)
Q Consensus 312 E~ 313 (466)
++
T Consensus 115 ~~ 116 (330)
T 3e9m_A 115 QE 116 (330)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 407
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=21.63 E-value=1.1e+02 Score=29.99 Aligned_cols=54 Identities=13% Similarity=0.028 Sum_probs=34.2
Q ss_pred CCCHHHHHHHH-HhCCceEEEecCCCCH-----HHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 012335 21 SRSVEMAEKLL-RAGMNVARFNFSHGSH-----AYHQETLDNLRTAMNNTGILCAVMLDTKG 76 (466)
Q Consensus 21 ~~~~~~l~~li-~~G~~v~RiN~shg~~-----~~~~~~i~~ir~~~~~~~~~i~i~~Dl~G 76 (466)
..+.+.++.|. +.|+|++||-++.+.. ++..+.++.+=+.+.+.|. .+++|+-+
T Consensus 53 ~~~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi--~VIld~H~ 112 (364)
T 1g01_A 53 IVNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVKDLVYEGIELAFEHDM--YVIVDWHV 112 (364)
T ss_dssp GCSHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHHHHHHHHHHHHHHTTC--EEEEEEEC
T ss_pred ccCHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHHHHHHHHHHHHHHCCC--EEEEEecc
Confidence 34678899997 8999999998874311 1222344444344445664 56788875
No 408
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=21.62 E-value=44 Score=30.92 Aligned_cols=82 Identities=13% Similarity=0.063 Sum_probs=51.9
Q ss_pred HHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEE-EeecCHHHHhcHHHHHhc-CCeeEEeCCcccCcCCc
Q 012335 185 EDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLM-SKVENLEGVANFDDVLAN-SDAFMVARGDLGMEIPI 262 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~Ii-aKIE~~~av~nideI~~~-sDgImiaRgDLg~e~~~ 262 (466)
..+.+.+.+.|+|++..|- ..++++..+|+.++ . ..++ .-|-- ++- ++.+.++. +|.++|||+=+..+=|.
T Consensus 118 ~~~a~~a~~~G~~GvV~sa-t~~~e~~~ir~~~~---~-f~~v~pGI~~-~g~-~~~~a~~~Gad~iVvGr~I~~a~dp~ 190 (215)
T 3ve9_A 118 PYLREVARRVNPKGFVAPA-TRPSMISRVKGDFP---D-KLVISPGVGT-QGA-KPGIALCHGADYEIVGRSVYQSADPV 190 (215)
T ss_dssp HHHHHHHHHHCCSEEECCT-TSHHHHHHHHHHCT---T-SEEEECCTTS-TTC-CTTHHHHTTCSEEEECHHHHTSSSHH
T ss_pred HHHHHHHHHcCCCceeeCC-CCHHHHHHHHHhCC---C-cEEEcCCCCc-CcC-CHHHHHHcCCCEEEeCHHHcCCCCHH
Confidence 3333677889999887662 33678888887653 2 3333 34421 111 45555554 89999999999888777
Q ss_pred hhHHHHHHHHH
Q 012335 263 EKIFLAQKVMI 273 (466)
Q Consensus 263 e~v~~~qk~ii 273 (466)
+..-.+++.+-
T Consensus 191 ~a~~~i~~~i~ 201 (215)
T 3ve9_A 191 RKLEEIVRSQE 201 (215)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66555555443
No 409
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=21.60 E-value=3.9e+02 Score=23.00 Aligned_cols=61 Identities=11% Similarity=0.029 Sum_probs=37.9
Q ss_pred HHHHHhcCCcEEEEEc----CCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 343 VRTANCIKAALILVLT----RGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 343 v~~a~~~~a~~Ivv~T----~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
.........++|++-- .+|.. .+.+-+..|.+||++++ . ........-.+-.|+.-++..+
T Consensus 39 ~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls------~------~~~~~~~~~~~~~ga~~~l~Kp 104 (225)
T 1kgs_A 39 MYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLT------A------LSDVEYRVKGLNMGADDYLPKP 104 (225)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEE------S------SCHHHHHHHTCCCCCSEEEESS
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEe------C------CCCHHHHHHHHhCCccEEEeCC
Confidence 3444556678776543 34543 45566667999999992 2 3333334455677998888765
No 410
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=21.56 E-value=60 Score=32.45 Aligned_cols=61 Identities=10% Similarity=0.084 Sum_probs=41.2
Q ss_pred hcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHhhhhh
Q 012335 237 ANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAAENF 314 (466)
Q Consensus 237 ~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naaE~~ 314 (466)
.+++++++-.|.+.|+ +|..-....--.+..+|-++||+|++ +.|. |.+|+.++..+|++.
T Consensus 58 ~~~~~l~~~~D~v~i~-------~p~~~h~~~~~~~a~~al~aGkhVl~---------EKPl-~~~ea~~l~~~A~~~ 118 (372)
T 4gmf_A 58 TSPEQITGMPDIACIV-------VRSTVAGGAGTQLARHFLARGVHVIQ---------EHPL-HPDDISSLQTLAQEQ 118 (372)
T ss_dssp SSGGGCCSCCSEEEEC-------CC--CTTSHHHHHHHHHHHTTCEEEE---------ESCC-CHHHHHHHHHHHHHH
T ss_pred CCHHHHhcCCCEEEEE-------CCCcccchhHHHHHHHHHHcCCcEEE---------ecCC-CHHHHHHHHHHHHHc
Confidence 3455566667888885 33222112224678889999999986 5675 788999999987764
No 411
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=21.54 E-value=1.2e+02 Score=28.50 Aligned_cols=49 Identities=16% Similarity=0.256 Sum_probs=30.1
Q ss_pred HHHHHHHHhCCceEEEecCCCC---HHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 012335 25 EMAEKLLRAGMNVARFNFSHGS---HAYHQETLDNLRTAMNNTGILCAVMLDTKG 76 (466)
Q Consensus 25 ~~l~~li~~G~~v~RiN~shg~---~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~G 76 (466)
+.++.|-+.|+|++|+-++.+. ... .+.++.+=+.+.+.|. .+++|+-+
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~-~~~ld~~v~~a~~~Gi--~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNG-PSDVANVISLCKQNRL--ICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCC-HHHHHHHHHHHHHTTC--EEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCC-HHHHHHHHHHHHHCCC--EEEEEecc
Confidence 6788999999999999886431 111 1223333333445554 56788753
No 412
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=21.54 E-value=1.4e+02 Score=29.83 Aligned_cols=61 Identities=18% Similarity=0.262 Sum_probs=44.6
Q ss_pred HHHhcHHHHHhc-------CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCC-CCCHHHHH
Q 012335 234 EGVANFDDVLAN-------SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSP-RPTRAEAT 305 (466)
Q Consensus 234 ~av~nideI~~~-------sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p-~PTRAEvs 305 (466)
....+++++++. .|+|+|+ .|.. ....++.+|-++||+|++ ++| ..|.+|+.
T Consensus 92 ~~~~~~~~ll~~~~~~~~~vD~V~I~-------tp~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~ 151 (417)
T 3v5n_A 92 RVYSDFKEMAIREAKLKNGIEAVAIV-------TPNH----VHYAAAKEFLKRGIHVIC---------DKPLTSTLADAK 151 (417)
T ss_dssp GBCSCHHHHHHHHHHCTTCCSEEEEC-------SCTT----SHHHHHHHHHTTTCEEEE---------ESSSCSSHHHHH
T ss_pred cccCCHHHHHhcccccCCCCcEEEEC-------CCcH----HHHHHHHHHHhCCCeEEE---------ECCCcCCHHHHH
Confidence 345688999986 7999996 3332 235677888999999986 344 46888998
Q ss_pred hHHHhhhhh
Q 012335 306 DVANAAENF 314 (466)
Q Consensus 306 Dv~naaE~~ 314 (466)
.+..+|++.
T Consensus 152 ~l~~~a~~~ 160 (417)
T 3v5n_A 152 KLKKAADES 160 (417)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHc
Confidence 888886653
No 413
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=21.53 E-value=1.5e+02 Score=29.49 Aligned_cols=54 Identities=15% Similarity=0.100 Sum_probs=36.0
Q ss_pred ceEEEeecCHHHHhcHHHHHh--cCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 012335 224 ILLMSKVENLEGVANFDDVLA--NSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVT 285 (466)
Q Consensus 224 ~~IiaKIE~~~av~nideI~~--~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ 285 (466)
++|++ =|+....+.+.++++ .+|.|++..+-+|- ..--.+|...|+++|.|+..
T Consensus 248 iPIa~-dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GG-------it~~~~ia~~A~~~gi~~~~ 303 (389)
T 3ozy_A 248 VRIAT-GENLYTRNAFNDYIRNDAIDVLQADASRAGG-------ITEALAISASAASAHLAWNP 303 (389)
T ss_dssp SEEEE-CTTCCHHHHHHHHHHTTCCSEECCCTTTSSC-------HHHHHHHHHHHHHTTCEECC
T ss_pred CCEEe-CCCCCCHHHHHHHHHcCCCCEEEeCccccCC-------HHHHHHHHHHHHHcCCEEEe
Confidence 44333 455556666666664 47999987666653 12346788999999999874
No 414
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=21.50 E-value=1.6e+02 Score=28.32 Aligned_cols=46 Identities=17% Similarity=0.192 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHh-CC-----------ceEEEec-CCC-CHHHHHHHHHHHHHHHHHcCCc
Q 012335 22 RSVEMAEKLLRA-GM-----------NVARFNF-SHG-SHAYHQETLDNLRTAMNNTGIL 67 (466)
Q Consensus 22 ~~~~~l~~li~~-G~-----------~v~RiN~-shg-~~~~~~~~i~~ir~~~~~~~~~ 67 (466)
...+..+.|.+. |+ +.+||++ ++. +.++..+.++.++++.++.+.+
T Consensus 334 ~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 393 (411)
T 3nnk_A 334 NGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLKFP 393 (411)
T ss_dssp CHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 345556667776 76 4689998 655 6888999999999998876653
No 415
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=21.47 E-value=1e+02 Score=29.90 Aligned_cols=58 Identities=17% Similarity=0.361 Sum_probs=42.8
Q ss_pred HhcHHHHHhc--CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCC-CCCHHHHHhHHHhhh
Q 012335 236 VANFDDVLAN--SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSP-RPTRAEATDVANAAE 312 (466)
Q Consensus 236 v~nideI~~~--sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p-~PTRAEvsDv~naaE 312 (466)
..+++++++. .|.|+|+ .|... ...++.+|-++||+|++ +.| ..|.+|...+..+|+
T Consensus 54 ~~~~~~ll~~~~~D~V~i~-------tp~~~----h~~~~~~al~aGk~Vl~---------EKP~a~~~~e~~~l~~~a~ 113 (349)
T 3i23_A 54 TADLNELLTDPEIELITIC-------TPAHT----HYDLAKQAILAGKSVIV---------EKPFCDTLEHAEELFALGQ 113 (349)
T ss_dssp ESCTHHHHSCTTCCEEEEC-------SCGGG----HHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEe-------CCcHH----HHHHHHHHHHcCCEEEE---------ECCCcCCHHHHHHHHHHHH
Confidence 4578888876 6999997 34322 34566788899999996 445 568899998888866
Q ss_pred h
Q 012335 313 N 313 (466)
Q Consensus 313 ~ 313 (466)
+
T Consensus 114 ~ 114 (349)
T 3i23_A 114 E 114 (349)
T ss_dssp H
T ss_pred H
Confidence 5
No 416
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=21.42 E-value=3.3e+02 Score=22.11 Aligned_cols=22 Identities=27% Similarity=0.504 Sum_probs=15.9
Q ss_pred hhccCCCCEEEEeC-CeEEEEEE
Q 012335 121 AEDLRPGSVILCSD-GTISLTVL 142 (466)
Q Consensus 121 ~~~v~~Gd~i~idd-G~i~l~V~ 142 (466)
.+.++||++|.++. ..-...++
T Consensus 72 ~~~LkpG~rVaLn~~s~~Iv~iL 94 (109)
T 2wg5_A 72 EEELKPGARVALNQQTLAIVNVL 94 (109)
T ss_dssp TTTCCTTCEEEEETTTCCEEEEE
T ss_pred HHHCCCCCEEEECCcceEeEEeC
Confidence 36799999999997 54444444
No 417
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=21.41 E-value=1.5e+02 Score=31.00 Aligned_cols=67 Identities=21% Similarity=0.155 Sum_probs=39.5
Q ss_pred HHHHhccCcCCCcEEEEcCCC---------ChhhHHHHHHHHHhc--CCCceEEEeecCHHHHhcHHHHHhc----CCee
Q 012335 185 EDILNWGVPNKIDMIALSFVR---------KGSDLVEVRNLLRVH--AKNILLMSKVENLEGVANFDDVLAN----SDAF 249 (466)
Q Consensus 185 ~di~~~~~~~~~d~v~~sfV~---------sa~dv~~~r~~l~~~--~~~~~IiaKIE~~~av~nideI~~~----sDgI 249 (466)
++. +.+.+.|+|+|.+|--. +.+-+.++++.+... +.++.||+- -|+.+-.+++++ +|++
T Consensus 355 e~A-~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~----GGI~~g~Dv~kaLalGAdaV 429 (511)
T 1kbi_A 355 EDV-IKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD----GGVRRGTDVLKALCLGAKGV 429 (511)
T ss_dssp HHH-HHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE----SSCCSHHHHHHHHHHTCSEE
T ss_pred HHH-HHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 344 55678999999996311 112344455555432 246888872 344444444443 8999
Q ss_pred EEeCCcc
Q 012335 250 MVARGDL 256 (466)
Q Consensus 250 miaRgDL 256 (466)
||||.=|
T Consensus 430 ~iGr~~l 436 (511)
T 1kbi_A 430 GLGRPFL 436 (511)
T ss_dssp EECHHHH
T ss_pred EECHHHH
Confidence 9999443
No 418
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=21.41 E-value=2.6e+02 Score=26.64 Aligned_cols=42 Identities=17% Similarity=0.078 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhcCC----cEEEEEcCCchHHHHHHhc--CCCCCEEEE
Q 012335 337 SLASSAVRTANCIKA----ALILVLTRGGTTAKMVSKY--RPSMPILSV 379 (466)
Q Consensus 337 ~ia~~av~~a~~~~a----~~Ivv~T~sG~ta~~vSk~--RP~~PIiAv 379 (466)
.-+...+..|.+.+. +.|+..| ||++++.+|.+ +-..|.+.+
T Consensus 44 R~a~~~i~~a~~~g~~~~~~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv 91 (316)
T 1y7l_A 44 RIGANMVWQAEKDGTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLT 91 (316)
T ss_dssp HHHHHHHHHHHHTTSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEE
Confidence 344444444555444 4455544 67777655442 345666665
No 419
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.38 E-value=2.2e+02 Score=21.94 Aligned_cols=71 Identities=6% Similarity=0.035 Sum_probs=38.3
Q ss_pred CcEEecCCCEEEEEeCCCCCCCccEEe-ecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeC-eEe
Q 012335 88 KPIQLVQGQEITISTDYSLKGDEKMIS-MSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENS-AVL 161 (466)
Q Consensus 88 ~~i~l~~G~~v~l~~~~~~~~~~~~i~-v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~g-G~l 161 (466)
..+.+..|+.++|.....-.-.....| -+...+.. ..+.....++|.+.+.-...+ +.....|.+.|. |..
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~--~~~~~~~~~~~~L~i~~v~~~-D~G~Y~C~a~n~~g~~ 88 (118)
T 2eo9_A 16 VNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVST--QDSRIKQLENGVLQIRYAKLG-DTGRYTCIASTPSGEA 88 (118)
T ss_dssp CCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCT--TSTTEEEEETTEEEEESCCGG-GCCCEEEEEECSSCEE
T ss_pred CCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcC--CCCeEEEccCCEEEEccCCcC-CCEEEEEEEEcCCCcE
Confidence 357899999999998632111122223 33222211 223444567785544322222 455789999875 443
No 420
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=21.38 E-value=2.9e+02 Score=21.50 Aligned_cols=61 Identities=15% Similarity=0.062 Sum_probs=34.9
Q ss_pred HHHHHhcCCcEEEEE----cCCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 343 VRTANCIKAALILVL----TRGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 343 v~~a~~~~a~~Ivv~----T~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
.........+.|++- ..+|.. .+.+.+..|.+||++++ . ..+...+ .-.+-.|+.-++..+
T Consensus 40 l~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s------~-----~~~~~~~-~~~~~~ga~~~l~KP 105 (132)
T 3crn_A 40 LAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVT------G-----YASLENS-VFSLNAGADAYIMKP 105 (132)
T ss_dssp HHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEE------S-----CCCHHHH-HHHHHTTCSEEEESS
T ss_pred HHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEe------c-----cccHHHH-HHHHhccchhhccCC
Confidence 334445566766653 234543 45666678999999992 1 0122222 233456888888765
No 421
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=21.37 E-value=1.2e+02 Score=28.25 Aligned_cols=23 Identities=17% Similarity=0.208 Sum_probs=18.8
Q ss_pred CHHHHHHHHHhCCceEEEecCCC
Q 012335 23 SVEMAEKLLRAGMNVARFNFSHG 45 (466)
Q Consensus 23 ~~~~l~~li~~G~~v~RiN~shg 45 (466)
..+.+++|.++|++.+=+++.+.
T Consensus 34 ~~~~~~~l~~~Gad~ielg~p~~ 56 (262)
T 1rd5_A 34 TAEALRLLDGCGADVIELGVPCS 56 (262)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCS
T ss_pred HHHHHHHHHHcCCCEEEECCCCC
Confidence 45678889999999999997554
No 422
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=21.36 E-value=4.7e+02 Score=24.38 Aligned_cols=126 Identities=11% Similarity=0.111 Sum_probs=66.9
Q ss_pred CCcccCCCCCChhcH-HHHHhccCcCCCcEEEE--cC---CCChhhHHHHHHHHHhcCCCceEEEeecCH----------
Q 012335 170 PGVIVDLPTLTEKDK-EDILNWGVPNKIDMIAL--SF---VRKGSDLVEVRNLLRVHAKNILLMSKVENL---------- 233 (466)
Q Consensus 170 p~~~~~lp~lte~D~-~di~~~~~~~~~d~v~~--sf---V~sa~dv~~~r~~l~~~~~~~~IiaKIE~~---------- 233 (466)
|...+++..-+..+. ..+ +.+.+.|+|.|=+ =| ..+.+++.+.-..|.+.-.+.+||.-+-+.
T Consensus 20 p~Icv~l~~~~~~e~~~~~-~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~ 98 (257)
T 2yr1_A 20 PCICAPVVGEDDRKVLREA-EEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLN 98 (257)
T ss_dssp CEEEEEECCSSHHHHHHHH-HHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSC
T ss_pred cEEEEEecCCCHHHHHHHH-HHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCC
Confidence 344444433333332 333 3345567776532 22 233444444333444332357788766432
Q ss_pred --HHHhcHHHHHhc--CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHH
Q 012335 234 --EGVANFDDVLAN--SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVAN 309 (466)
Q Consensus 234 --~av~nideI~~~--sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~n 309 (466)
+-++-+...++. .|.|=| |+...+ ..+++++.+++.|..+|.+-+-++. .|+..|+....+
T Consensus 99 ~~~~~~ll~~~~~~g~~d~iDv-------El~~~~---~~~~l~~~~~~~~~kvI~S~Hdf~~-----tP~~~el~~~~~ 163 (257)
T 2yr1_A 99 EAEVRRLIEAICRSGAIDLVDY-------ELAYGE---RIADVRRMTEECSVWLVVSRHYFDG-----TPRKETLLADMR 163 (257)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEE-------EGGGTT---HHHHHHHHHHHTTCEEEEEEEESSC-----CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEE-------ECCCCh---hHHHHHHHHHhCCCEEEEEecCCCC-----CcCHHHHHHHHH
Confidence 223334444442 454433 444433 5667888889999999998876654 677677665554
Q ss_pred hh
Q 012335 310 AA 311 (466)
Q Consensus 310 aa 311 (466)
.+
T Consensus 164 ~~ 165 (257)
T 2yr1_A 164 QA 165 (257)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 423
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=21.30 E-value=76 Score=31.58 Aligned_cols=69 Identities=14% Similarity=0.119 Sum_probs=0.0
Q ss_pred CChhcHHHHHhccCcCCCcEEEEcC-------CCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc--CCee
Q 012335 179 LTEKDKEDILNWGVPNKIDMIALSF-------VRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN--SDAF 249 (466)
Q Consensus 179 lte~D~~di~~~~~~~~~d~v~~sf-------V~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~--sDgI 249 (466)
.+..+...+.+.+.+.|+|+|.++- -...+-+..+|+.+ +++|++- ... ..++.+++++. +|+|
T Consensus 248 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~-----~iPvi~~-Ggi-t~~~a~~~l~~g~aD~V 320 (364)
T 1vyr_A 248 NEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERF-----HGVIIGA-GAY-TAEKAEDLIGKGLIDAV 320 (364)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC-----CSEEEEE-SSC-CHHHHHHHHHTTSCSEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHC-----CCCEEEE-CCc-CHHHHHHHHHCCCccEE
Q ss_pred EEeCC
Q 012335 250 MVARG 254 (466)
Q Consensus 250 miaRg 254 (466)
++||+
T Consensus 321 ~~gR~ 325 (364)
T 1vyr_A 321 AFGRD 325 (364)
T ss_dssp EESHH
T ss_pred EECHH
No 424
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=21.27 E-value=2.9e+02 Score=21.46 Aligned_cols=59 Identities=17% Similarity=0.143 Sum_probs=33.0
Q ss_pred HHHHhcCCcEEEEEc-----CCchH-HHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 344 RTANCIKAALILVLT-----RGGTT-AKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 344 ~~a~~~~a~~Ivv~T-----~sG~t-a~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
....+...++|++-. .+|.. .+.+.+. |.+||++++ . ..........+-.|+.-++..+
T Consensus 48 ~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~-~~~~ii~ls------~------~~~~~~~~~~~~~g~~~~l~kp 112 (140)
T 3cg0_A 48 RCAPDLRPDIALVDIMLCGALDGVETAARLAAG-CNLPIIFIT------S------SQDVETFQRAKRVNPFGYLAKP 112 (140)
T ss_dssp HHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHH-SCCCEEEEE------C------CCCHHHHHHHHTTCCSEEEEES
T ss_pred HHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhC-CCCCEEEEe------c------CCCHHHHHHHHhcCCCEEEeCC
Confidence 333445677777642 34432 4455555 999999992 1 2222222334567888877764
No 425
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=21.24 E-value=4.2e+02 Score=25.47 Aligned_cols=55 Identities=13% Similarity=0.116 Sum_probs=34.2
Q ss_pred CCCCCHHHHHHHHHhCCceEEEe-----cCCCCHH----HHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 19 PASRSVEMAEKLLRAGMNVARFN-----FSHGSHA----YHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 19 p~~~~~~~l~~li~~G~~v~RiN-----~shg~~~----~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
|...+.-.-+-+-++|.++.=+. +++|-++ ...+++..+|....-...| |++|+.
T Consensus 24 ~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~P--viaD~d 87 (295)
T 1s2w_A 24 MEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVP--ILLDAD 87 (295)
T ss_dssp EEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSSC--EEEECC
T ss_pred ecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCC--EEecCC
Confidence 44667766776777788877666 3566554 3456777777777766555 777775
No 426
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=21.17 E-value=2.1e+02 Score=27.19 Aligned_cols=99 Identities=12% Similarity=0.040 Sum_probs=0.0
Q ss_pred CCCChhcHHHHHhccCcCC-CcEEEEcCCC-----------------------------ChhhHHHHHHHHHhcCCCceE
Q 012335 177 PTLTEKDKEDILNWGVPNK-IDMIALSFVR-----------------------------KGSDLVEVRNLLRVHAKNILL 226 (466)
Q Consensus 177 p~lte~D~~di~~~~~~~~-~d~v~~sfV~-----------------------------sa~dv~~~r~~l~~~~~~~~I 226 (466)
|.++..+...+.+.+.+.| +|+|.++--. .+..+..++++-... .+++|
T Consensus 169 ~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipv 247 (314)
T 2e6f_A 169 PYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC-PDKLV 247 (314)
T ss_dssp CCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC-TTSEE
T ss_pred CCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc-CCCCE
Q ss_pred EE--eecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcC
Q 012335 227 MS--KVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQG 280 (466)
Q Consensus 227 ia--KIE~~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~g 280 (466)
|+ -|.+.+-+ .+-|..-+|++++||+=|. -++.-+..+.+.+-....+.|
T Consensus 248 i~~GGI~~~~da--~~~l~~GAd~V~ig~~~l~--~~p~~~~~i~~~l~~~~~~~g 299 (314)
T 2e6f_A 248 FGCGGVYSGEDA--FLHILAGASMVQVGTALQE--EGPGIFTRLEDELLEIMARKG 299 (314)
T ss_dssp EEESSCCSHHHH--HHHHHHTCSSEEECHHHHH--HCTTHHHHHHHHHHHHHHHHT
T ss_pred EEECCCCCHHHH--HHHHHcCCCEEEEchhhHh--cCcHHHHHHHHHHHHHHHHcC
No 427
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=21.16 E-value=72 Score=31.11 Aligned_cols=49 Identities=8% Similarity=0.102 Sum_probs=41.5
Q ss_pred hhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEee
Q 012335 181 EKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKV 230 (466)
Q Consensus 181 e~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKI 230 (466)
+.|.+.+ +.=++.|+||+.--++-+.+......+.+.+.|-+++|++=|
T Consensus 163 ~~d~~~L-k~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GI 211 (304)
T 3fst_A 163 QADLLNL-KRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGI 211 (304)
T ss_dssp HHHHHHH-HHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEE
T ss_pred HHHHHHH-HHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 3577777 555789999999999999999999999998888778888765
No 428
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=21.14 E-value=1.7e+02 Score=28.59 Aligned_cols=78 Identities=21% Similarity=0.333 Sum_probs=53.0
Q ss_pred CCCCCCCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEe--c---------CCCCH----------HHHHHHHHHHHHHH
Q 012335 3 GDHQNSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFN--F---------SHGSH----------AYHQETLDNLRTAM 61 (466)
Q Consensus 3 ~~~~~~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN--~---------shg~~----------~~~~~~i~~ir~~~ 61 (466)
|.|+...+-+-+.-||--.++.+.+++.++.|+|.+=+. | -||.+ +...++++.||++.
T Consensus 18 ~~~~~~~~~rp~~~i~H~vNTl~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~~~~~~~~~l~~lr~~t 97 (302)
T 3rlg_A 18 GSHMLEGNRRPIWIMGAMVNAIGQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCKKYENFNDFLKGLRSAT 97 (302)
T ss_dssp ------CCCEEEEEEESCCCSHHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSCCCCBHHHHHHHHHHHH
T ss_pred cccccccCCCceEEEeehhhhHHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcchhccCCCCccHHHHHHHHHHhc
Confidence 445555566777888999999999999999999998776 3 25533 23466888898875
Q ss_pred H----Hc-CCceEEEecCCCCeeE
Q 012335 62 N----NT-GILCAVMLDTKGPEIR 80 (466)
Q Consensus 62 ~----~~-~~~i~i~~Dl~GpkiR 80 (466)
. ++ ...+-+++|||=+.+.
T Consensus 98 tpg~~k~~~~l~lv~~DlK~~~l~ 121 (302)
T 3rlg_A 98 TPGNSKYQEKLVLVVFDLKTGSLY 121 (302)
T ss_dssp STTSTTCCTTCCEEEEEECGGGSC
T ss_pred CCCCCccccceEEEEEEcCCCCCC
Confidence 3 11 3557789999855544
No 429
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=21.13 E-value=2.7e+02 Score=27.54 Aligned_cols=68 Identities=10% Similarity=0.027 Sum_probs=48.8
Q ss_pred HHHHHHHHHhcCCCceEEEeecC--------------HHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHH
Q 012335 210 LVEVRNLLRVHAKNILLMSKVEN--------------LEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHK 275 (466)
Q Consensus 210 v~~~r~~l~~~~~~~~IiaKIE~--------------~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~ 275 (466)
+..+++.|.+.+.++.+.+--++ ....+|++++++-.|.|+-+-.++. ....+-..
T Consensus 90 a~aaa~~L~~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~----------tR~lin~~ 159 (340)
T 3rui_A 90 AELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE----------SRWLPSLL 159 (340)
T ss_dssp HHHHHHHHHHHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTG----------GGHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHH----------HHHHHHHH
Confidence 55667777777777777664322 2345688999999999987744432 24567889
Q ss_pred HHHcCCCeEEee
Q 012335 276 ANIQGKPVVTAT 287 (466)
Q Consensus 276 ~~~~gkPvi~AT 287 (466)
|+++|||+|.|.
T Consensus 160 c~~~~~plI~aa 171 (340)
T 3rui_A 160 SNIENKTVINAA 171 (340)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHcCCcEEEee
Confidence 999999999876
No 430
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=21.10 E-value=1.8e+02 Score=31.12 Aligned_cols=69 Identities=10% Similarity=0.052 Sum_probs=51.4
Q ss_pred hHHHHHHHHHhcCCCceEEEeecCH--------------HHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHH
Q 012335 209 DLVEVRNLLRVHAKNILLMSKVENL--------------EGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIH 274 (466)
Q Consensus 209 dv~~~r~~l~~~~~~~~IiaKIE~~--------------~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~ 274 (466)
-+..+++.|.+.+.++.|.+--+.. ...+|++++++..|.|+-+-..+. ....+-.
T Consensus 382 KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~----------tR~lin~ 451 (598)
T 3vh1_A 382 KAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE----------SRWLPSL 451 (598)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGG----------GTHHHHH
T ss_pred HHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHH----------HHHHHHH
Confidence 4677788888888888887755431 345788999999999987643332 3466788
Q ss_pred HHHHcCCCeEEee
Q 012335 275 KANIQGKPVVTAT 287 (466)
Q Consensus 275 ~~~~~gkPvi~AT 287 (466)
.|.+++||+|.|+
T Consensus 452 ~c~~~~~plI~aa 464 (598)
T 3vh1_A 452 LSNIENKTVINAA 464 (598)
T ss_dssp HHHHTTCEEEEEE
T ss_pred HHHhcCCCEEEEE
Confidence 9999999999876
No 431
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=21.04 E-value=1.5e+02 Score=28.95 Aligned_cols=100 Identities=15% Similarity=0.203 Sum_probs=64.6
Q ss_pred ChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhc--CCeeEEeCCccc
Q 012335 180 TEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN--SDAFMVARGDLG 257 (466)
Q Consensus 180 te~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~--sDgImiaRgDLg 257 (466)
+..+...+.+...+.|+++|=-|+ .++|+..++++-... .++|++ =|+....+.+.++++. +|.|++-.+-.|
T Consensus 200 ~~~~a~~~~~~l~~~~i~~iEqP~--~~~~~~~~~~l~~~~--~ipIa~-dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G 274 (370)
T 1nu5_A 200 DEQTASIWIPRLEEAGVELVEQPV--PRANFGALRRLTEQN--GVAILA-DESLSSLSSAFELARDHAVDAFSLKLCNMG 274 (370)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECCS--CTTCHHHHHHHHHHC--SSEEEE-STTCCSHHHHHHHHHTTCCSEEEECHHHHT
T ss_pred CHHHHHHHHHHHHhcCcceEeCCC--CcccHHHHHHHHHhC--CCCEEe-CCCCCCHHHHHHHHHhCCCCEEEEchhhcC
Confidence 444443332444567899998886 346676666544332 455544 5777777788888876 799999644443
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHh
Q 012335 258 MEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLES 292 (466)
Q Consensus 258 ~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeS 292 (466)
- ..--.+++..|+++|.++.+.+ |+||
T Consensus 275 G-------it~~~~i~~~A~~~g~~~~~~~-~~es 301 (370)
T 1nu5_A 275 G-------IANTLKVAAVAEAAGISSYGGT-MLDS 301 (370)
T ss_dssp S-------HHHHHHHHHHHHHHTCEEEECC-SSCC
T ss_pred C-------HHHHHHHHHHHHHcCCcEEecC-Ccch
Confidence 2 1233678999999999988644 5554
No 432
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=20.99 E-value=1.2e+02 Score=29.21 Aligned_cols=59 Identities=22% Similarity=0.153 Sum_probs=42.8
Q ss_pred HHhcHHHHHhc--CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCC-CCCHHHHHhHHHhh
Q 012335 235 GVANFDDVLAN--SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSP-RPTRAEATDVANAA 311 (466)
Q Consensus 235 av~nideI~~~--sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p-~PTRAEvsDv~naa 311 (466)
...+++++++. .|.|+|+ .|... ...++..|-++||+|++ ++| ..|.+|...+..+|
T Consensus 54 ~~~~~~~ll~~~~~D~V~i~-------tp~~~----h~~~~~~al~~Gk~vl~---------EKP~a~~~~e~~~l~~~a 113 (344)
T 3mz0_A 54 VYPNDDSLLADENVDAVLVT-------SWGPA----HESSVLKAIKAQKYVFC---------EKPLATTAEGCMRIVEEE 113 (344)
T ss_dssp EESSHHHHHHCTTCCEEEEC-------SCGGG----HHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHH
T ss_pred eeCCHHHHhcCCCCCEEEEC-------CCchh----HHHHHHHHHHCCCcEEE---------cCCCCCCHHHHHHHHHHH
Confidence 44678899886 7999996 34332 24455678899999986 344 56888988888886
Q ss_pred hh
Q 012335 312 EN 313 (466)
Q Consensus 312 E~ 313 (466)
++
T Consensus 114 ~~ 115 (344)
T 3mz0_A 114 IK 115 (344)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 433
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=20.99 E-value=97 Score=29.54 Aligned_cols=105 Identities=13% Similarity=0.134 Sum_probs=60.3
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCC-CceEEEeecCHHHHhcHHHHHhcCCeeEEeCCcccCcCCc-hhHH
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAK-NILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPI-EKIF 266 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~-~~~IiaKIE~~~av~nideI~~~sDgImiaRgDLg~e~~~-e~v~ 266 (466)
+.+.+.|+|++.++=+-. +++.++.+.+.+.|- .+.+++-. ...+.+++|.+.+.|.+..-.=.|+ .|. ..++
T Consensus 113 ~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~gl~~i~liap~---s~~eri~~ia~~~~gfiy~vs~~G~-TG~~~~~~ 187 (271)
T 1ujp_A 113 GLFKQAGATGVILPDLPP-DEDPGLVRLAQEIGLETVFLLAPT---STDARIATVVRHATGFVYAVSVTGV-TGMRERLP 187 (271)
T ss_dssp HHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHTCEEECEECTT---CCHHHHHHHHTTCCSCEEEECC------------
T ss_pred HHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcCCceEEEeCCC---CCHHHHHHHHHhCCCCEEEEecCcc-cCCCCCCC
Confidence 345678999999886654 777888888887763 23344332 3456889999998776543211111 111 1111
Q ss_pred HHHHHHHHHHHHc-CCCeEEeehhhHhhhcCCCCCHHHHHhH
Q 012335 267 LAQKVMIHKANIQ-GKPVVTATQMLESMIKSPRPTRAEATDV 307 (466)
Q Consensus 267 ~~qk~ii~~~~~~-gkPvi~ATqmLeSM~~~p~PTRAEvsDv 307 (466)
.--...++..+++ +.|+++..- .=|.+.+..+
T Consensus 188 ~~~~~~v~~vr~~~~~Pv~vGfG---------I~t~e~a~~~ 220 (271)
T 1ujp_A 188 EEVKDLVRRIKARTALPVAVGFG---------VSGKATAAQA 220 (271)
T ss_dssp -CCHHHHHHHHTTCCSCEEEESC---------CCSHHHHHHH
T ss_pred ccHHHHHHHHHhhcCCCEEEEcC---------CCCHHHHHHh
Confidence 1113445555554 789998764 4456666665
No 434
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=20.96 E-value=3.9e+02 Score=25.57 Aligned_cols=158 Identities=16% Similarity=0.126 Sum_probs=92.9
Q ss_pred CCChhcHHHHHhccCcCCCcEEEEcCC-------------CChhhHH-HHHHHHHhcCCCceEEEeecC------HHHHh
Q 012335 178 TLTEKDKEDILNWGVPNKIDMIALSFV-------------RKGSDLV-EVRNLLRVHAKNILLMSKVEN------LEGVA 237 (466)
Q Consensus 178 ~lte~D~~di~~~~~~~~~d~v~~sfV-------------~sa~dv~-~~r~~l~~~~~~~~IiaKIE~------~~av~ 237 (466)
-+|-+|.--- +.+-+.|+|.|.+..- -+-+|+. .++... +.-++..|++=+++ .++++
T Consensus 33 m~tayDa~sA-~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~-r~~~~~~vvaD~pfgsY~s~~~a~~ 110 (275)
T 3vav_A 33 MLTCYDASFA-ALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVA-RAQPRALIVADLPFGTYGTPADAFA 110 (275)
T ss_dssp EEECCSHHHH-HHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHH-HTCCSSEEEEECCTTSCSSHHHHHH
T ss_pred EEeCcCHHHH-HHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHH-hcCCCCCEEEecCCCCCCCHHHHHH
Confidence 3466777776 6778899999987621 1223333 333333 33356899999998 46778
Q ss_pred cHHHHHhc-CCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHhhhhhcc
Q 012335 238 NFDDVLAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAAENFIN 316 (466)
Q Consensus 238 nideI~~~-sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~naaE~~~~ 316 (466)
|...++++ ++||-+==|. .+-..|++..++|.||+--.. | .|.+. |. .+
T Consensus 111 ~a~rl~kaGa~aVklEdg~------------~~~~~i~~l~~~GIpv~gHlg-l-------tPq~~------~~----~g 160 (275)
T 3vav_A 111 SAVKLMRAGAQMVKFEGGE------------WLAETVRFLVERAVPVCAHVG-L-------TPQSV------HA----FG 160 (275)
T ss_dssp HHHHHHHTTCSEEEEECCG------------GGHHHHHHHHHTTCCEEEEEE-S-------CGGGH------HH----HC
T ss_pred HHHHHHHcCCCEEEECCch------------hHHHHHHHHHHCCCCEEEecC-C-------CceEE------ec----cC
Confidence 88888876 6888875441 123456666789999984322 1 23221 11 11
Q ss_pred chhhHHHHHhhCCCCCCcHHHHHHHHHH---HHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEE
Q 012335 317 YGDLFKKIMETAPVPMSPLESLASSAVR---TANCIKAALILVLTRGGTTAKMVSKYRPSMPILSV 379 (466)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ia~~av~---~a~~~~a~~Ivv~T~sG~ta~~vSk~RP~~PIiAv 379 (466)
- |. . ...+ ++-+..+.+ +-.+.+|.+|++---.-..++.+++-- .+|++.+
T Consensus 161 g---~~---v---qgrt--~~~a~~~i~rA~a~~eAGA~~ivlE~vp~~~a~~It~~l-~iP~igI 214 (275)
T 3vav_A 161 G---FK---V---QGKT--EAGAAQLLRDARAVEEAGAQLIVLEAVPTLVAAEVTREL-SIPTIGI 214 (275)
T ss_dssp ---------C---CCCS--HHHHHHHHHHHHHHHHHTCSEEEEESCCHHHHHHHHHHC-SSCEEEE
T ss_pred C---eE---E---EcCC--HHHHHHHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHhC-CCCEEEE
Confidence 0 10 0 0111 111222222 234569999998776666788887765 4999998
No 435
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=20.96 E-value=68 Score=30.52 Aligned_cols=76 Identities=13% Similarity=0.132 Sum_probs=51.7
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEE-EeecCHHHH--------hcHHHHHhc-CCeeEEeCCcccC
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLM-SKVENLEGV--------ANFDDVLAN-SDAFMVARGDLGM 258 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~Ii-aKIE~~~av--------~nideI~~~-sDgImiaRgDLg~ 258 (466)
+.+.+.|+|++..| +.++..+|+.++ .+..++ .=|- +++- .+..+.+++ +|.+++||+=++.
T Consensus 169 ~~a~~aG~~GvV~s----a~e~~~iR~~~g---~~fl~VtPGIr-~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a 240 (255)
T 3ldv_A 169 TLTKNAGLDGVVCS----AQEASLLKQHLG---REFKLVTPGIR-PAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQA 240 (255)
T ss_dssp HHHHHTTCSEEECC----HHHHHHHHHHHC---TTSEEEEECCC-CTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTC
T ss_pred HHHHHcCCCEEEEC----HHHHHHHHHhcC---CCcEEEeCCcc-cCcCCccceeccCCHHHHHHcCCCEEEECHHHhCC
Confidence 44567899988665 889999998764 345544 5552 2332 246677765 8999999998887
Q ss_pred cCCchhHHHHHHHH
Q 012335 259 EIPIEKIFLAQKVM 272 (466)
Q Consensus 259 e~~~e~v~~~qk~i 272 (466)
+=|.+.+..+.++|
T Consensus 241 ~dp~~a~~~i~~ei 254 (255)
T 3ldv_A 241 AHPEVVLEEINSSL 254 (255)
T ss_dssp SCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhh
Confidence 76666655555443
No 436
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=20.88 E-value=85 Score=30.99 Aligned_cols=51 Identities=12% Similarity=0.207 Sum_probs=32.1
Q ss_pred HHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHHHHcCCceEEEecCCCC
Q 012335 25 EMAEKLLRAGMNVARFNFSHGS--HAYHQETLDNLRTAMNNTGILCAVMLDTKGP 77 (466)
Q Consensus 25 ~~l~~li~~G~~v~RiN~shg~--~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~Gp 77 (466)
+.++.|-+.|+|++|+-++-+. .+...+.++.+=+.+.+.| +.+++|+-+.
T Consensus 58 ~~i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~G--iyVIlDlH~~ 110 (345)
T 3jug_A 58 TAIPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNK--MVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT--CEEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEeccC
Confidence 5788999999999999886432 1112233333334444555 4577888754
No 437
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=20.87 E-value=61 Score=31.63 Aligned_cols=62 Identities=10% Similarity=0.092 Sum_probs=47.7
Q ss_pred hhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHH
Q 012335 181 EKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVL 243 (466)
Q Consensus 181 e~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~ 243 (466)
+.|.+.+ +.=++.|+||+.--++-+.+.+....+.+.+.|-+++|++=|==.....++.-+.
T Consensus 160 ~~d~~~L-k~Kv~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~ 221 (310)
T 3apt_A 160 EADLRHF-KAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFT 221 (310)
T ss_dssp HHHHHHH-HHHHHHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHHH
T ss_pred HHHHHHH-HHHHHcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHHH
Confidence 3577777 5567899999999999999999999999998887888988774333344444443
No 438
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=20.84 E-value=88 Score=24.12 Aligned_cols=29 Identities=28% Similarity=0.378 Sum_probs=22.8
Q ss_pred hccCCCCEEEEeCCeEEEEEEEEecCCCeEEE
Q 012335 122 EDLRPGSVILCSDGTISLTVLDCAKELGLVRC 153 (466)
Q Consensus 122 ~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~ 153 (466)
-.=++|..|.|+| .|..+|.++. ++.+.-
T Consensus 16 LtRK~GEsI~IGd-dI~ItVl~i~--g~qVrL 44 (73)
T 1vpz_A 16 LTRRVGETLMVGD-DVTVTVLGVK--GNQVRI 44 (73)
T ss_dssp EEEETTCEEEETT-TEEEEEEEEE--TTEEEE
T ss_pred EEccCCCEEEeCC-CEEEEEEEEe--CCEEEE
Confidence 3457899999998 8999999885 666653
No 439
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=20.81 E-value=1.7e+02 Score=28.25 Aligned_cols=42 Identities=14% Similarity=0.215 Sum_probs=32.5
Q ss_pred CCHHHHHHHHHhCC---------------ceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 012335 22 RSVEMAEKLLRAGM---------------NVARFNFSHGSHAYHQETLDNLRTAMNN 63 (466)
Q Consensus 22 ~~~~~l~~li~~G~---------------~v~RiN~shg~~~~~~~~i~~ir~~~~~ 63 (466)
...+..+.|.+.|+ +.+||+|++.+.++..+.++.++++.++
T Consensus 336 ~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 336 SAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKG 392 (397)
T ss_dssp CHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 34566777887774 4579999988889999999999887654
No 440
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=20.79 E-value=3.7e+02 Score=26.60 Aligned_cols=62 Identities=19% Similarity=0.178 Sum_probs=40.9
Q ss_pred CCeEEEEecCCCCCCHHH----HHHHHHh-CCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 9 PKTKIVCTLGPASRSVEM----AEKLLRA-GMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 9 r~tkIi~TiGp~~~~~~~----l~~li~~-G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
.+....+|+|- .+++. .+++++. |-+.+.+.....+.++-.+.++.+|++ .|..+.|++|..
T Consensus 155 ~~v~~y~s~g~--~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a---~G~~~~l~vDaN 221 (383)
T 3toy_A 155 RPIPAYDSYGV--LDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRAL---LGPDIALMLDFN 221 (383)
T ss_dssp CCEEEEEECSS--CCHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHH---HCTTSEEEEECT
T ss_pred CceEEeEecCC--CCHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHH---hCCCCeEEEeCC
Confidence 34666777764 34443 4557778 999999999877777766666666654 344455666653
No 441
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=20.61 E-value=1.2e+02 Score=29.49 Aligned_cols=54 Identities=26% Similarity=0.170 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHHhCCceEEEecCCCCH-----HHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 012335 21 SRSVEMAEKLLRAGMNVARFNFSHGSH-----AYHQETLDNLRTAMNNTGILCAVMLDTKG 76 (466)
Q Consensus 21 ~~~~~~l~~li~~G~~v~RiN~shg~~-----~~~~~~i~~ir~~~~~~~~~i~i~~Dl~G 76 (466)
....+.++.|-+.|+|++|+-++.... +...+.++.+=+.+.+.|. .+++|+-+
T Consensus 85 ~~~~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi--~Vild~H~ 143 (359)
T 4hty_A 85 RFSKKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELGI--YTILDWHS 143 (359)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEEEECC
T ss_pred CcCHHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCCC--EEEEEcCC
Confidence 345788999999999999998764331 2223344444444555664 57788765
No 442
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=20.42 E-value=83 Score=30.78 Aligned_cols=68 Identities=22% Similarity=0.172 Sum_probs=44.2
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceE-EEeecCHHH--------HhcHHHHHhc-CCeeEEeCCcccC
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILL-MSKVENLEG--------VANFDDVLAN-SDAFMVARGDLGM 258 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~I-iaKIE~~~a--------v~nideI~~~-sDgImiaRgDLg~ 258 (466)
+.+.+.|+|+|.. ++.++..+|+.++ .+..+ ..=|= ++| +.++.+.+++ +|.+++||+=+..
T Consensus 165 ~~a~~~G~dGvV~----s~~E~~~IR~~~~---~~fl~VTPGIr-~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a 236 (303)
T 3ru6_A 165 KISYENGLDGMVC----SVFESKKIKEHTS---SNFLTLTPGIR-PFGETNDDQKRVANLAMARENLSDYIVVGRPIYKN 236 (303)
T ss_dssp HHHHHTTCSEEEC----CTTTHHHHHHHSC---TTSEEEECCCC-TTC--------CCSHHHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHcCCCEEEE----CHHHHHHHHHhCC---CccEEECCCcC-cccCCcccccccCCHHHHHHcCCCEEEEChHHhCC
Confidence 4456789999755 5778888887653 33333 33442 222 3477777766 8999999987776
Q ss_pred cCCchh
Q 012335 259 EIPIEK 264 (466)
Q Consensus 259 e~~~e~ 264 (466)
+=|.+.
T Consensus 237 ~dp~~a 242 (303)
T 3ru6_A 237 ENPRAV 242 (303)
T ss_dssp SCHHHH
T ss_pred CCHHHH
Confidence 544433
No 443
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=20.40 E-value=97 Score=27.27 Aligned_cols=53 Identities=8% Similarity=0.128 Sum_probs=38.4
Q ss_pred HHhcHHHHHhc---CC--eeEEeCCcc----cCcCCchhHHHHHHHHHHHHHHcCCCeEEee
Q 012335 235 GVANFDDVLAN---SD--AFMVARGDL----GMEIPIEKIFLAQKVMIHKANIQGKPVVTAT 287 (466)
Q Consensus 235 av~nideI~~~---sD--gImiaRgDL----g~e~~~e~v~~~qk~ii~~~~~~gkPvi~AT 287 (466)
.+..+++++.. .| -|++|-.|+ ....+.+.+..-.+++++.+++.|.++++.|
T Consensus 59 ~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~~ 120 (240)
T 3mil_A 59 ALKILPEILKHESNIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIRPIIIG 120 (240)
T ss_dssp HHHHHHHHHHHCCCEEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHhcccCCCCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 34445555542 45 445566788 4567788888888999999999998888877
No 444
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=20.37 E-value=2.6e+02 Score=21.84 Aligned_cols=58 Identities=9% Similarity=0.082 Sum_probs=32.5
Q ss_pred HHHhcCCcEEEEEcCCchH-HHHHHhcCC-CCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCC
Q 012335 345 TANCIKAALILVLTRGGTT-AKMVSKYRP-SMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSG 415 (466)
Q Consensus 345 ~a~~~~a~~Ivv~T~sG~t-a~~vSk~RP-~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~ 415 (466)
...+...++|+....+|.. .+.+-+. | .+||++++ . ........-.+-.|+.-++..+
T Consensus 57 ~l~~~~~dlvi~~~~~g~~~~~~l~~~-~~~~~ii~ls------~------~~~~~~~~~~~~~g~~~~l~kP 116 (137)
T 2pln_A 57 LMDIRNYDLVMVSDKNALSFVSRIKEK-HSSIVVLVSS------D------NPTSEEEVHAFEQGADDYIAKP 116 (137)
T ss_dssp HHHHSCCSEEEECSTTHHHHHHHHHHH-STTSEEEEEE------S------SCCHHHHHHHHHTTCSEEEESS
T ss_pred HHHcCCCCEEEEcCccHHHHHHHHHhc-CCCccEEEEe------C------CCCHHHHHHHHHcCCceeeeCC
Confidence 3345567877733335543 4455555 8 89999992 1 2222222233456888887765
No 445
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=20.36 E-value=3.2e+02 Score=24.41 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=25.8
Q ss_pred hccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCC
Q 012335 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAK 222 (466)
Q Consensus 189 ~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~ 222 (466)
+.+.+.|+|+|-+.+- ...++.++++.+.+.|-
T Consensus 22 ~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl 54 (260)
T 1k77_A 22 AAARKAGFDAVEFLFP-YNYSTLQIQKQLEQNHL 54 (260)
T ss_dssp HHHHHHTCSEEECSCC-TTSCHHHHHHHHHHTTC
T ss_pred HHHHHhCCCEEEecCC-CCCCHHHHHHHHHHcCC
Confidence 5667899999988763 45678899999988763
No 446
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=20.29 E-value=1.9e+02 Score=31.03 Aligned_cols=69 Identities=10% Similarity=0.030 Sum_probs=51.2
Q ss_pred hHHHHHHHHHhcCCCceEEEeecC--------------HHHHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHH
Q 012335 209 DLVEVRNLLRVHAKNILLMSKVEN--------------LEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIH 274 (466)
Q Consensus 209 dv~~~r~~l~~~~~~~~IiaKIE~--------------~~av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~ 274 (466)
-+..+++.|.+.+.++.+.+--++ ....+|++++++..|.|+-+-.++. .+..+-.
T Consensus 381 KAeaaa~~L~~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~----------tR~~ln~ 450 (615)
T 4gsl_A 381 KAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE----------SRWLPSL 450 (615)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGG----------GTHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHH----------HHHHHHH
Confidence 356677888888888887765432 2344688999999999998755443 3457888
Q ss_pred HHHHcCCCeEEee
Q 012335 275 KANIQGKPVVTAT 287 (466)
Q Consensus 275 ~~~~~gkPvi~AT 287 (466)
.|.++|||+|.|+
T Consensus 451 ~c~~~~~PlI~aa 463 (615)
T 4gsl_A 451 LSNIENKTVINAA 463 (615)
T ss_dssp HHHHTTCEEEEEE
T ss_pred HHHHcCCeEEEEE
Confidence 9999999999886
No 447
>1vky_A S-adenosylmethionine:tRNA ribosyltransferase-ISOM; TM0574, struct genomics, JCSG, protein structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: e.53.1.1
Probab=20.27 E-value=1.6e+02 Score=29.37 Aligned_cols=55 Identities=15% Similarity=0.384 Sum_probs=33.8
Q ss_pred ecchhhhhccCCCCEEEEeC---------------CeEEEEEEEEecCCCeEEEEEeeCeEecCCCccccC
Q 012335 115 MSYKKLAEDLRPGSVILCSD---------------GTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLP 170 (466)
Q Consensus 115 v~~~~~~~~v~~Gd~i~idd---------------G~i~l~V~~v~~~~~~i~~~v~~gG~l~~~Kgvnlp 170 (466)
-.+.+|++.+++||.+.++| |+|++-+.+.. +++.-.|.|..+..++.+.-+.++
T Consensus 53 ~~F~dl~~~L~~GDlLV~NdTrVipARL~G~k~tG~~iEvlLl~~~-~~~~w~~lv~p~kk~k~G~~l~f~ 122 (347)
T 1vky_A 53 RIFREIIEYLEPGDLLVLNVSKVIPARLYARKKTGASIEILLIERL-EEGIWKCLVRPGQKVKKGTELVID 122 (347)
T ss_dssp EEGGGGGGGCCTTCEEEEEEEECCSCEEEEBC---CCEEEEEEEEE-ETTEEEEEEESCTTCCTTCEEEEE
T ss_pred eeHHhhHhhcCCCCEEEecCceEEeeEEEEEcCCCCeEEEEEeeEc-CCCeEEEEeccCCCCCCCCEEEeC
Confidence 34667777778888777763 56666665532 244556666666666555555554
No 448
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=20.19 E-value=1.5e+02 Score=28.49 Aligned_cols=45 Identities=13% Similarity=0.139 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHh-CC-----------ceEEEec-CCCCHHH-HHHHHHHHHHHHHHcCC
Q 012335 22 RSVEMAEKLLRA-GM-----------NVARFNF-SHGSHAY-HQETLDNLRTAMNNTGI 66 (466)
Q Consensus 22 ~~~~~l~~li~~-G~-----------~v~RiN~-shg~~~~-~~~~i~~ir~~~~~~~~ 66 (466)
...+..+.|.+. |+ +.+||++ .+.+.++ ..+.++.++++.++++.
T Consensus 334 ~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 392 (416)
T 3isl_A 334 DGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHNA 392 (416)
T ss_dssp CHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcCC
Confidence 345666667776 75 5689999 6677777 99999999999887764
No 449
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=20.18 E-value=1.4e+02 Score=28.59 Aligned_cols=53 Identities=15% Similarity=0.068 Sum_probs=32.9
Q ss_pred CCCHHHHHHHHHhCCceEEEecCCC---------C-HHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 012335 21 SRSVEMAEKLLRAGMNVARFNFSHG---------S-HAYHQETLDNLRTAMNNTGILCAVMLDTK 75 (466)
Q Consensus 21 ~~~~~~l~~li~~G~~v~RiN~shg---------~-~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~ 75 (466)
....+.++.|-+.|+|++||-++.. . .+...+.++.+=+.+++.|. .+++|+-
T Consensus 36 ~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi--~vildlh 98 (341)
T 1vjz_A 36 NFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGI--HICISLH 98 (341)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTC--EEEEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCC--EEEEEec
Confidence 3468899999999999999986521 1 12233344444344445554 5677764
No 450
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=20.08 E-value=70 Score=26.52 Aligned_cols=30 Identities=20% Similarity=0.490 Sum_probs=22.4
Q ss_pred ecchhhhhccCCCCEEEEeCCeEEEEEEEEe
Q 012335 115 MSYKKLAEDLRPGSVILCSDGTISLTVLDCA 145 (466)
Q Consensus 115 v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~ 145 (466)
+++++ .+.+++||.|.+.+..+..+|+++.
T Consensus 26 lnd~k-~~~ikvGD~I~f~~~~l~~~V~~v~ 55 (109)
T 2z0t_A 26 LYDEK-RRQIKPGDIIIFEGGKLKVKVKGIR 55 (109)
T ss_dssp ECCTT-GGGCCTTCEEEEGGGTEEEEEEEEE
T ss_pred ecchh-hhcCCCCCEEEECCCEEEEEEEEEE
Confidence 34443 4678999999996558888888774
No 451
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=20.04 E-value=97 Score=23.19 Aligned_cols=27 Identities=30% Similarity=0.426 Sum_probs=21.3
Q ss_pred cCCCCEEEEeCCeEEEEEEEEecCCCeEEE
Q 012335 124 LRPGSVILCSDGTISLTVLDCAKELGLVRC 153 (466)
Q Consensus 124 v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~ 153 (466)
-++|..|.|+| .|..+|.++. ++.+.-
T Consensus 8 Rk~GE~I~Igd-~I~I~Vl~i~--g~~Vrl 34 (63)
T 2bti_A 8 RRVGETLMIGD-EVTVTVLGVK--GNQVRI 34 (63)
T ss_dssp EETTCEEEETT-TEEEEEEEEE--TTEEEE
T ss_pred ccCCCeEEeCC-CEEEEEEEEe--CCEEEE
Confidence 37899999988 7889999885 666654
Done!