BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012337
(465 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255554328|ref|XP_002518204.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223542800|gb|EEF44337.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 496
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 321/447 (71%), Positives = 361/447 (80%), Gaps = 16/447 (3%)
Query: 20 RRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIP 79
+RKR + E E+ +SL WNSS S ++DPF+ VGS+EL+GGFLSLEEIDE Y +IP
Sbjct: 21 KRKRNNEDPELERFDSLSWNSSLS--EDDPFSGFVGSHELEGGFLSLEEIDEVDYGFEIP 78
Query: 80 KPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKG 139
KPEKGK GKK +KK+K + D DG +++ +N K +K +KKKKKK
Sbjct: 79 KPEKGKTGKKLKSKKQKHN--------DADGSVKEKEKEEKTLENEKKKKKRKKKKKKAK 130
Query: 140 KKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPI 199
+ K E+ VSNG DD + E V EAE F AWNELRLHPLLMKSIYRLGFKEPTPI
Sbjct: 131 ETQKN-EQPAAVSNGEDDTDGESVDEAE----FHAWNELRLHPLLMKSIYRLGFKEPTPI 185
Query: 200 QKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAP 259
QKACIP AAHQGKD+IGAAETGSGKTLAFGLPI+QRLLEER+KA L+E GEEAEKY P
Sbjct: 186 QKACIPPAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEERDKAANYLDEMGEEAEKYGP 245
Query: 260 KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGT 319
G LRALIITPTRELALQVTDHLKE A GIN++VVPIVGGMSTEKQERLLKARPE++VGT
Sbjct: 246 TGLLRALIITPTRELALQVTDHLKEAAMGINIKVVPIVGGMSTEKQERLLKARPEIIVGT 305
Query: 320 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE 379
PGRLWELMSGGE HLVELH+LSFFVLDEADRMIENGHFRELQSIIDMLPM +GS EG S+
Sbjct: 306 PGRLWELMSGGESHLVELHSLSFFVLDEADRMIENGHFRELQSIIDMLPMASGSVEGLSQ 365
Query: 380 QTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQ-SVNGLNSIETLSERA 438
TQ CVT+S+LQRKKRQT VFSATIALS DFRKKLK GSLK KQ + +GLNSIE LSERA
Sbjct: 366 NTQNCVTLSNLQRKKRQTFVFSATIALSTDFRKKLKRGSLKPKQLTADGLNSIENLSERA 425
Query: 439 GMRANVAIVDLTNVSVLANKLEESFIE 465
GMR N AI+DLTN S+LA+KLEESFIE
Sbjct: 426 GMRPNAAIIDLTNASILAHKLEESFIE 452
>gi|224107545|ref|XP_002314517.1| predicted protein [Populus trichocarpa]
gi|222863557|gb|EEF00688.1| predicted protein [Populus trichocarpa]
Length = 847
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 311/457 (68%), Positives = 358/457 (78%), Gaps = 28/457 (6%)
Query: 17 KPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNL 76
K +RKRT E ++L+SL WNSS S +DPF+ + GS+EL+GGFLSLEEIDE Y L
Sbjct: 19 KKGKRKRTHIDPEIDRLDSLPWNSSIS--QDDPFSVIAGSHELEGGFLSLEEIDEGDYGL 76
Query: 77 QIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGN-------GVQKEQEKNLKNQK 129
+IP +K ++ N K+++ D D D DG G+ E +K K +K
Sbjct: 77 EIPGLDKKVKKERKNKSKKQK---------DSDADADGVEEEVEEEGINVEDKKKRKKRK 127
Query: 130 GKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIY 189
KKK K+ V+E+ +VSN DD E E V E TEF WNELRLHPLLMKSIY
Sbjct: 128 KKKKAKESS-----RVDETTSVSNNKDDVEGESVDE----TEFYGWNELRLHPLLMKSIY 178
Query: 190 RLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 249
RLGFKEPTPIQKACIPAAAHQGKD++GAAETGSGKTLAFGLPI+QRLLEE++KA M +
Sbjct: 179 RLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEEQDKASNMGDN 238
Query: 250 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL 309
GEEAE++APKG LRALIITPTRELA+QVTDH KE A GIN+RVV IVGGMSTEKQERLL
Sbjct: 239 VGEEAERFAPKGLLRALIITPTRELAIQVTDHFKEAAHGINIRVVSIVGGMSTEKQERLL 298
Query: 310 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
KARPE++VGTPGRLWELMSGGEKHLVELH+LSFFVLDEADRMIENGHFRELQSIIDMLPM
Sbjct: 299 KARPEIIVGTPGRLWELMSGGEKHLVELHSLSFFVLDEADRMIENGHFRELQSIIDMLPM 358
Query: 370 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSV-NGL 428
+GS GQS+ ++ C T+S++Q KKRQT VFSATIALSADFRKKLK GSLK KQS+ +GL
Sbjct: 359 ASGSIGGQSQSSENCQTLSNMQIKKRQTFVFSATIALSADFRKKLKRGSLKSKQSMADGL 418
Query: 429 NSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
NSIE LSERAGMRAN AI+DLTN S+LANKLEESFIE
Sbjct: 419 NSIEMLSERAGMRANAAIIDLTNASILANKLEESFIE 455
>gi|356520440|ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Glycine
max]
Length = 810
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 308/464 (66%), Positives = 364/464 (78%), Gaps = 14/464 (3%)
Query: 12 HSKETKPNRRKRTRKSR-EAEKLNSLKWNSSF-SAADNDPFAFLVGSNELDGGFLSLEEI 69
+S + KP R++ + KS E ++L+SL WNS+ D+D F+ +GSNEL+GGFLSLEEI
Sbjct: 9 NSSQRKPKRKRASAKSDPELDRLDSLPWNSALPQNDDDDAFSLFIGSNELEGGFLSLEEI 68
Query: 70 DEASYNLQIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQK 129
DEA Y L IP+PE K K ++ + ++ G D V+ E +++LK+++
Sbjct: 69 DEAEYGLSIPEPEVDKRKTKKKKSEQNENVKKQQQDGVDSACSDDTVVEAELDESLKSKE 128
Query: 130 GKKKKKKKK-----GKKIKTVEESVT--VSNGPDDAEEELVSEAEISTEFDAWNELRLHP 182
KKKKKK K ++ +TVE S +N DD EE V E TEF AWNELRLHP
Sbjct: 129 KKKKKKKTKNKKKDAREDQTVEPSDAGLDTNVKDDIGEEDVDE----TEFYAWNELRLHP 184
Query: 183 LLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREK 242
LL+K+I +LGFKEPTPIQKACIPAAAHQGKD++GAAETGSGKTLAFGLPI+QRLLEEREK
Sbjct: 185 LLLKAICKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEEREK 244
Query: 243 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMST 302
AG M+ E+GEE EKYA G LRALII PTRELALQVTDHLK VAK INVRV PIVGG+
Sbjct: 245 AGNMVGERGEEPEKYASTGLLRALIIAPTRELALQVTDHLKAVAKHINVRVTPIVGGILA 304
Query: 303 EKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 362
EKQERLLKA+PE+VVGTPGRLWELMS GEKHLVELH+LSFFVLDEADRM++NGHF+ELQS
Sbjct: 305 EKQERLLKAKPEIVVGTPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVQNGHFKELQS 364
Query: 363 IIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLK 422
IIDMLPM+N S E S+ Q+CVTVSS QRKKRQTLVFSAT+ALS+DFRKKLK GS+K K
Sbjct: 365 IIDMLPMSNNSAEDNSQHVQSCVTVSSYQRKKRQTLVFSATVALSSDFRKKLKRGSIKQK 424
Query: 423 QSV-NGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
QS+ +GLNSIETLSERAGMR+N AI+DLTN S+LA KLEESFIE
Sbjct: 425 QSLTDGLNSIETLSERAGMRSNAAIIDLTNPSILATKLEESFIE 468
>gi|225433316|ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Vitis vinifera]
gi|296083755|emb|CBI23744.3| unnamed protein product [Vitis vinifera]
Length = 788
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 318/453 (70%), Positives = 358/453 (79%), Gaps = 17/453 (3%)
Query: 18 PN-RRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNL 76
PN RRKRT + + E+L SL WN S D DPF+ VGS+EL+GGFLSLEEIDE+ Y L
Sbjct: 6 PNARRKRTAVNPDLERLESLPWNPSLPDVD-DPFSLFVGSDELEGGFLSLEEIDESEYGL 64
Query: 77 QIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKK 136
+I +P G KK N K+ K+S + GD D G GV+ E+ + ++K KKKKK
Sbjct: 65 EIHEP--GPEDKKGNPKQSKKSKKRKS---SGDNDSSGGGVEDGTEEEVVDKKNFKKKKK 119
Query: 137 KKGKKI---KTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGF 193
KK K +T EES TVSN DD E + V EA EF WNELRLHPLLMKSI+RLGF
Sbjct: 120 KKKKVTKKNQTNEESATVSNDKDDVEGDSVDEA----EFYEWNELRLHPLLMKSIHRLGF 175
Query: 194 KEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEE 253
K+PTPIQKACIPAAAHQGKD++GA+ETGSGKTLA GLPI+QRLLEEREKA + L E E
Sbjct: 176 KQPTPIQKACIPAAAHQGKDVVGASETGSGKTLALGLPILQRLLEEREKAAEPLAENSE- 234
Query: 254 AEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARP 313
EKYA G LRALIITPTRELALQVTDHLKEVAKG NVRVVPIVGGMSTEKQERLLKARP
Sbjct: 235 -EKYAEGGILRALIITPTRELALQVTDHLKEVAKGTNVRVVPIVGGMSTEKQERLLKARP 293
Query: 314 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 373
E+VVGTPGRLWELMS GE HLVELH+LSFFVLDEADRM+ENGHF ELQSIID+LP T+GS
Sbjct: 294 EIVVGTPGRLWELMSRGEDHLVELHSLSFFVLDEADRMVENGHFHELQSIIDILPKTSGS 353
Query: 374 NEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVN-GLNSIE 432
E S+ T+ C TVS++QRKKRQT VFSATIALSADFRKKLK G+L+ KQ +N GLNSIE
Sbjct: 354 MESLSQNTENCFTVSNIQRKKRQTFVFSATIALSADFRKKLKRGALRSKQLMNDGLNSIE 413
Query: 433 TLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
TLSERAGMR N AIVDLTN S++ANKLEESFIE
Sbjct: 414 TLSERAGMRPNAAIVDLTNASIMANKLEESFIE 446
>gi|449509127|ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like, partial
[Cucumis sativus]
Length = 784
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 291/491 (59%), Positives = 357/491 (72%), Gaps = 42/491 (8%)
Query: 9 TYEHSKETKPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEE 68
T S + + +RK+T+K E E+L+SL WNSS +D + +GSN+L+GGFLSLEE
Sbjct: 6 TQSTSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPI--DDTLSAFIGSNDLEGGFLSLEE 63
Query: 69 IDEASYNLQIPKPEKGK----PGKKTNTKKRKRSSAN----------------------- 101
IDEA Y + IP+P+ K P N++K ++++A+
Sbjct: 64 IDEAEYGMVIPEPDTRKHKLIPKASGNSRKEEQNNADYCEDASRAKREKEKKKKKKKKVI 123
Query: 102 ------EEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGP 155
E+D G D +G++ E + + + +KK++ K+ +T + +
Sbjct: 124 HEVPTAEKDVAIDIGGNDNDGIETEIGDEMDDDDHLETEKKQQKKEKETKDHGID-KEIR 182
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDII 215
D+ E++ V E TE+ AWNELRLHPLLMKSIY+LGFKEPT IQKACIPAAA+QGKD++
Sbjct: 183 DEVEKDAVDE----TEYYAWNELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQGKDVV 238
Query: 216 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 275
GAAETGSGKTLAFGLPI+QR L+EREK+GKM EEKG +A+KYAPK LRALIITPTRELA
Sbjct: 239 GAAETGSGKTLAFGLPILQRFLDEREKSGKMSEEKGVDAKKYAPKSLLRALIITPTRELA 298
Query: 276 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 335
LQVTDHLK VA GI++RVVPIVGGMSTEKQERLL+ RPE+VVGTPGRLWELMSGGEKHLV
Sbjct: 299 LQVTDHLKAVAVGIDIRVVPIVGGMSTEKQERLLRTRPEVVVGTPGRLWELMSGGEKHLV 358
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
EL LSFFVLDEADRMIENGHFRELQSIIDMLP+TNGS E + + +T QRKKR
Sbjct: 359 ELEALSFFVLDEADRMIENGHFRELQSIIDMLPVTNGSAENL-QNAENSLTTPISQRKKR 417
Query: 396 QTLVFSATIALSADFRKKLKHGSLKLKQS-VNGLNSIETLSERAGMRANVAIVDLTNVSV 454
QTLVFSAT++LS+DFRKKLK S K QS ++GLNSIE LSERAG+R NVA+++LTN SV
Sbjct: 418 QTLVFSATLSLSSDFRKKLKRVSSKPNQSGMDGLNSIEALSERAGIRPNVAVINLTNTSV 477
Query: 455 LANKLEESFIE 465
LAN LEESFIE
Sbjct: 478 LANNLEESFIE 488
>gi|357505253|ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355497930|gb|AES79133.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 798
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 297/466 (63%), Positives = 344/466 (73%), Gaps = 34/466 (7%)
Query: 17 KPNRRKRTRKSREAE--KLNSLKWNSSFSAA----DNDP-FAFLVGSNELDGGFLSLEEI 69
K R+ RT K +AE + +SL WNSS DND F+ GSNEL+GGFLSLEEI
Sbjct: 8 KSKRKNRTVKPHDAELDRFDSLPWNSSIPQPDENDDNDASFSLFTGSNELEGGFLSLEEI 67
Query: 70 DEASYNLQIPKPE------KGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEK 123
DEA Y L IP PE KP KK+N +K+ DG G ++
Sbjct: 68 DEAEYGLNIPDPENHDRKHNSKPDKKSNKQKQ-------------DGACSGGETMNDESI 114
Query: 124 NLKNQKGKKKKKKKKGKKIKTVEESVTVSNGP--DDAEEELVSEAEISTEFDAWNELRLH 181
+ +K KKKKK K K+ + VE S T N D +EE + E TE+ AWNELRLH
Sbjct: 115 KSEVKKKKKKKKNKDAKENQKVELSNTGVNADVKDSVDEENIDE----TEYYAWNELRLH 170
Query: 182 PLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEERE 241
P LMK+I++LGFKEPTPIQKAC+PAAAHQGKD+IGAAETGSGKTLAFGLPI+QRLLEERE
Sbjct: 171 PRLMKAIHKLGFKEPTPIQKACVPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEERE 230
Query: 242 KAGKMLEEKGEE-AEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGM 300
KA + GEE AEKYA G LR+LII PTRELALQV HLK VAK INVRV IVGG+
Sbjct: 231 KAESISGVNGEEAAEKYATTGLLRSLIIAPTRELALQVAKHLKAVAKHINVRVTAIVGGI 290
Query: 301 STEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 360
EKQERLLKARPE+VV TPGRLWELMS GEKHL+ELH+LSFFVLDEADRM+++GHF+EL
Sbjct: 291 LPEKQERLLKARPEIVVATPGRLWELMSSGEKHLIELHSLSFFVLDEADRMVQSGHFKEL 350
Query: 361 QSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK 420
QSIIDMLPM+N S+E S+ Q CVTVSS+Q+KKRQTLVFSAT+ALSADFRKKLK GS++
Sbjct: 351 QSIIDMLPMSNISSEDNSKDAQNCVTVSSIQKKKRQTLVFSATVALSADFRKKLKRGSIQ 410
Query: 421 LKQ-SVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
KQ S +GL+SIETLSERAGMR N AI+DLTN S+LA K+EESFIE
Sbjct: 411 KKQLSTDGLDSIETLSERAGMRPNAAIIDLTNPSILAAKIEESFIE 456
>gi|449458872|ref|XP_004147170.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Cucumis
sativus]
Length = 848
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 299/510 (58%), Positives = 359/510 (70%), Gaps = 60/510 (11%)
Query: 9 TYEHSKETKPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEE 68
T S + + +RK+T+K E E+L+SL WNSS +D + +GSN+L+GGFLSLEE
Sbjct: 6 TQSTSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPI--DDTLSAFIGSNDLEGGFLSLEE 63
Query: 69 IDEASYNLQIPKPEKGK----PGKKTNTKKRKRSSANE-EDPGDGDGDEDGNGVQKEQEK 123
IDEA Y + IP+P+ K P NT+K ++++A+ ED G D + KE
Sbjct: 64 IDEAEYGMVIPEPDTRKHKLIPKASGNTRKEEQNNADYCEDASRGSND----SIDKEAAG 119
Query: 124 NLKNQKGKKKKKKKKGK--------KIKTVEESVTVSNGPDDAE---------------- 159
+ N K KK KK+K K ++ T E+ V + G +D +
Sbjct: 120 HNVNTKTSKKGKKEKKKKKKKKVIHEVPTAEKDVAIDIGGNDNDGIETEIGDEMDDDDHL 179
Query: 160 -----------------------EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEP 196
+E+ +A TE+ AWNELRLHPLLMKSIY+LGFKEP
Sbjct: 180 ETEKKQQKKEKETKDHGIDKEIRDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKEP 239
Query: 197 TPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEK 256
T IQKACIPAAA+QGKD++GAAETGSGKTLAFGLPI+QR L+EREK+GKM EEKG +A+K
Sbjct: 240 TAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRFLDEREKSGKMSEEKGVDAKK 299
Query: 257 YAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELV 316
YAPK LRALIITPTRELALQVTDHLK VA GI++RVVPIVGGMSTEKQERLL+ RPE+V
Sbjct: 300 YAPKSLLRALIITPTRELALQVTDHLKAVAVGIDIRVVPIVGGMSTEKQERLLRTRPEVV 359
Query: 317 VGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEG 376
VGTPGRLWELMSGGEKHLVEL LSFFVLDEADRMIENGHFRELQSIIDMLP+TNGS E
Sbjct: 360 VGTPGRLWELMSGGEKHLVELEALSFFVLDEADRMIENGHFRELQSIIDMLPVTNGSAEN 419
Query: 377 QSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQS-VNGLNSIETLS 435
+ + +T QRKKRQTLVFSAT++LS+DFRKKLK S K QS ++GLNSIE LS
Sbjct: 420 L-QNAENSLTTPISQRKKRQTLVFSATLSLSSDFRKKLKRVSSKPNQSGMDGLNSIEALS 478
Query: 436 ERAGMRANVAIVDLTNVSVLANKLEESFIE 465
ERAG+R NVA+++LTN SVLAN LEESFIE
Sbjct: 479 ERAGIRPNVAVINLTNTSVLANNLEESFIE 508
>gi|297834580|ref|XP_002885172.1| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis lyrata subsp.
lyrata]
gi|297331012|gb|EFH61431.1| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis lyrata subsp.
lyrata]
Length = 831
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/320 (71%), Positives = 264/320 (82%), Gaps = 1/320 (0%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
+ S VS D EE V EI EF AW +RLHPLLMKSIY LGFK+PT IQKAC
Sbjct: 161 DTSDAVSCDDDYKVEEQVEGEEIPPEFSAWGLMRLHPLLMKSIYHLGFKQPTEIQKACFS 220
Query: 206 AAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 265
AA+QGKD+IGAAETGSGKTLAFGLPI+QRLL+EREK GK+ KGE+A+KYA G+LRA
Sbjct: 221 IAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEKAQKYAADGYLRA 280
Query: 266 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 325
LIITPTRELALQVTDHLK A+ +NV+VVPIVGGMS+ KQERLLK +PE+VVGTPGRLWE
Sbjct: 281 LIITPTRELALQVTDHLKNAAENLNVKVVPIVGGMSSAKQERLLKGKPEIVVGTPGRLWE 340
Query: 326 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 385
LMS GEKHLVELH+LSFFVLDEADRM+E+GHFRELQSIID+LP+T+ NEG+ + Q+
Sbjct: 341 LMSAGEKHLVELHSLSFFVLDEADRMVESGHFRELQSIIDLLPVTDRPNEGKMQTVQSSD 400
Query: 386 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIETLSERAGMRANV 444
TVS+ +KKRQT VFSATIALS+DFRKKLK GS K K S +G +NSIE LSERAGMR +V
Sbjct: 401 TVSNAPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKPSSSGEVNSIEVLSERAGMRDSV 460
Query: 445 AIVDLTNVSVLANKLEESFI 464
AI+DLT S+LA K+EESFI
Sbjct: 461 AIIDLTTASILAPKIEESFI 480
>gi|227202696|dbj|BAH56821.1| AT3G16840 [Arabidopsis thaliana]
Length = 827
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/323 (70%), Positives = 267/323 (82%), Gaps = 1/323 (0%)
Query: 143 KTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
K + S VS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKA
Sbjct: 161 KNQDASAAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKA 220
Query: 203 CIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH 262
C AA+QGKD+IGAAETGSGKTLAFGLPI+QRLL+EREK GK+ KGEEA+KYA G+
Sbjct: 221 CFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGY 280
Query: 263 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 322
LRALIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGR
Sbjct: 281 LRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGR 340
Query: 323 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 382
LWELMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ NEG+++ +
Sbjct: 341 LWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDRPNEGKTQTVK 400
Query: 383 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIETLSERAGMR 441
+ TV ++ +KKRQT VFSATIALS+DFRKKLK GS K KQS +G +NSIE LSERAGMR
Sbjct: 401 SNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMR 460
Query: 442 ANVAIVDLTNVSVLANKLEESFI 464
NVAI+DLT S+LA K+EESFI
Sbjct: 461 DNVAIIDLTTTSILAPKIEESFI 483
>gi|79404523|ref|NP_188307.3| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis thaliana]
gi|374095486|sp|Q93Y39.3|RH13_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|332642351|gb|AEE75872.1| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis thaliana]
Length = 826
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/320 (70%), Positives = 267/320 (83%), Gaps = 1/320 (0%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
+++ VS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKAC
Sbjct: 163 QDASAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFN 222
Query: 206 AAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 265
AA+QGKD+IGAAETGSGKTLAFGLPI+QRLL+EREK GK+ KGEEA+KYA G+LRA
Sbjct: 223 VAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLRA 282
Query: 266 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 325
LIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGRLWE
Sbjct: 283 LIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWE 342
Query: 326 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 385
LMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ NEG+++ ++
Sbjct: 343 LMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSND 402
Query: 386 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIETLSERAGMRANV 444
TV ++ +KKRQT VFSATIALS+DFRKKLK GS K KQS +G +NSIE LSERAGMR NV
Sbjct: 403 TVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNV 462
Query: 445 AIVDLTNVSVLANKLEESFI 464
AI+DLT S+LA K+EESFI
Sbjct: 463 AIIDLTTTSILAPKIEESFI 482
>gi|7939577|dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 832
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/320 (70%), Positives = 267/320 (83%), Gaps = 1/320 (0%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
+++ VS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKAC
Sbjct: 163 QDASAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFN 222
Query: 206 AAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 265
AA+QGKD+IGAAETGSGKTLAFGLPI+QRLL+EREK GK+ KGEEA+KYA G+LRA
Sbjct: 223 VAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLRA 282
Query: 266 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 325
LIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGRLWE
Sbjct: 283 LIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWE 342
Query: 326 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 385
LMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ NEG+++ ++
Sbjct: 343 LMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSND 402
Query: 386 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIETLSERAGMRANV 444
TV ++ +KKRQT VFSATIALS+DFRKKLK GS K KQS +G +NSIE LSERAGMR NV
Sbjct: 403 TVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNV 462
Query: 445 AIVDLTNVSVLANKLEESFI 464
AI+DLT S+LA K+EESFI
Sbjct: 463 AIIDLTTTSILAPKIEESFI 482
>gi|15450790|gb|AAK96666.1| ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 797
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/320 (70%), Positives = 267/320 (83%), Gaps = 1/320 (0%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
+++ VS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKAC
Sbjct: 163 QDASAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFN 222
Query: 206 AAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 265
AA+QGKD+IGAAETGSGKTLAFGLPI+QRLL+EREK GK+ KGEEA+KYA G+LRA
Sbjct: 223 VAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLRA 282
Query: 266 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 325
LIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGRLWE
Sbjct: 283 LIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWE 342
Query: 326 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 385
LMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ NEG+++ ++
Sbjct: 343 LMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSND 402
Query: 386 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIETLSERAGMRANV 444
TV ++ +KKRQT VFSATIALS+DFRKKLK GS K KQS +G +NSIE LSERAGMR NV
Sbjct: 403 TVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNV 462
Query: 445 AIVDLTNVSVLANKLEESFI 464
AI+DLT S+LA K+EESFI
Sbjct: 463 AIIDLTTTSILAPKIEESFI 482
>gi|357167963|ref|XP_003581416.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like
[Brachypodium distachyon]
Length = 872
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/444 (54%), Positives = 299/444 (67%), Gaps = 31/444 (6%)
Query: 48 DPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKPG-KKTNTKKRKRSSANEEDPG 106
DPF L G E GGFL LEEID A + + E + +K + ++K+ + G
Sbjct: 93 DPFFVLAGGKE--GGFLELEEIDGADFGIFGGTVEDVEASDRKVGSDQKKKKKKKKRKRG 150
Query: 107 DG----DGDEDGNGVQKE-------------------QEKNLKNQKGKKKKKKKKGKKIK 143
G DGD+DG+ E + K + ++ + + +
Sbjct: 151 HGAERLDGDDDGDCASGELVFESKEEGNKGEKKGKSKKRNRKKRKVKDTEQDSESKEDVD 210
Query: 144 TVEESVT-VSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
VE+ + N D ++EL + EF AW ELRLHPLL+K+++RLGFKEPTPIQKA
Sbjct: 211 NVEDMQDGIENMKQDNDDELKLGED---EFYAWLELRLHPLLVKAMHRLGFKEPTPIQKA 267
Query: 203 CIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH 262
C PA AHQGKD+IGAAETGSGKTLAFGLPI+QRLLEEREKA ++ E + E+ + G
Sbjct: 268 CFPAGAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKATRLNVEDKKAMEESSTGGP 327
Query: 263 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 322
LRALI+TPTRELA QV DHLKE +K + + VVPIVGG+S EKQERLLK +PE+VVGTPGR
Sbjct: 328 LRALILTPTRELAKQVCDHLKEASKFLGIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGR 387
Query: 323 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 382
LWELMS G +HLVELH+LSFFVLDEADRMIE GHF+EL SII+MLP++N S+E T
Sbjct: 388 LWELMSTGNQHLVELHSLSFFVLDEADRMIERGHFKELHSIIEMLPLSNSSDEQAVRATP 447
Query: 383 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSV-NGLNSIETLSERAGMR 441
+C TV +LQ KKRQT VFSAT+ALSA+FR KLK G K S+ + L+SIE LS++AGM+
Sbjct: 448 SCETVLNLQIKKRQTFVFSATLALSANFRSKLKRGLSTSKASMADNLSSIEALSKQAGMK 507
Query: 442 ANVAIVDLTNVSVLANKLEESFIE 465
N IVDLTN S+L KLEESFIE
Sbjct: 508 PNAEIVDLTNASILPEKLEESFIE 531
>gi|326526415|dbj|BAJ97224.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 872
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/296 (69%), Positives = 243/296 (82%), Gaps = 1/296 (0%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E AW ELRLHPLL+K+++RLGF EPTPIQKACIPA AHQGKD+IGAAETGSGKTLAFGL
Sbjct: 236 ELYAWLELRLHPLLIKAMHRLGFNEPTPIQKACIPAGAHQGKDVIGAAETGSGKTLAFGL 295
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
PI+QRLLEEREK ++ E +EAE + G LRALI+TPTRELA QV DHLKE AK +
Sbjct: 296 PILQRLLEEREKTTRLHVEDEKEAEGSSTGGPLRALILTPTRELAKQVCDHLKEAAKFLG 355
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+ VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HLVELH+LSFFVLDEADR
Sbjct: 356 IHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWELMSSGNQHLVELHSLSFFVLDEADR 415
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
MIE GHF+E+QSII+MLP++N S+E + T +C TV++LQ KKRQT VFSAT+ALSA+F
Sbjct: 416 MIERGHFKEVQSIIEMLPLSNSSDEQTVKATSSCETVANLQIKKRQTFVFSATLALSANF 475
Query: 411 RKKLKHG-SLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
RKKLK G S + L+SIE LS++AGM+ N IVDLTN S+L KLEESFIE
Sbjct: 476 RKKLKRGLSTSKASTAEDLSSIEELSKQAGMKPNAEIVDLTNASILPEKLEESFIE 531
>gi|414586362|tpg|DAA36933.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 842
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 244/476 (51%), Positives = 316/476 (66%), Gaps = 32/476 (6%)
Query: 19 NRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNL-- 76
N++ R++K + ++ +S S DPF L G E GGFL LEEIDEA + +
Sbjct: 29 NKKNRSKKQPKRAGADTDGLSSGASTMVEDPFFVLAGGKE--GGFLDLEEIDEADFGIFG 86
Query: 77 -QIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDG---------DEDGNGVQKEQEKNLK 126
+ + + K+K+ + + GDG+G + D V+K ++K
Sbjct: 87 GVLDDVGQSVEEAGKDHGKKKKKTKKRKRGGDGEGFSGDAALVVENDQVDVEKVEKKVED 146
Query: 127 NQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTE--------------- 171
+KG KK K+K K + V+++ +D + + + TE
Sbjct: 147 GEKGDKKGKRKMNMKKRKVKDNEMNRESDEDVASDKAEDMQDDTENMEQNEDDELILGED 206
Query: 172 -FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
AW ELRLHPLL+K++ RLGFKEPTPIQK+C PAAAH+GKD+IGAAETGSGKTLAFGL
Sbjct: 207 DVSAWRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHRGKDVIGAAETGSGKTLAFGL 266
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
P++QRLLEEREKA + L+++ E+ E+ + LRALI+TPTRELA QV DHLK+VAK +
Sbjct: 267 PVLQRLLEEREKATR-LQQEDEKMEERSCGSPLRALILTPTRELAKQVCDHLKDVAKFLG 325
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+ VVPIVGG+S EKQERLLK +PE+VVGTPGRLWE MS +HLVELH+LSFF+LDEADR
Sbjct: 326 IHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWEHMSMNNQHLVELHSLSFFILDEADR 385
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
MIE GHFRELQSII+MLP+TNGS+E + C TV LQ KKRQT VFSAT+ALS++F
Sbjct: 386 MIERGHFRELQSIIEMLPLTNGSDEQAARTMPNCETVPILQIKKRQTFVFSATLALSSNF 445
Query: 411 RKKLKHGSLKLKQSV-NGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
RKKLK G K S + ++SIE LS++AGM++N IVDLT S+L KLEESFIE
Sbjct: 446 RKKLKRGLSTSKASTPDDVSSIEALSKQAGMKSNAEIVDLTKASILPEKLEESFIE 501
>gi|293332967|ref|NP_001169277.1| uncharacterized protein LOC100383140 [Zea mays]
gi|224028341|gb|ACN33246.1| unknown [Zea mays]
Length = 842
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 244/476 (51%), Positives = 315/476 (66%), Gaps = 32/476 (6%)
Query: 19 NRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNL-- 76
N++ R++K + ++ +S S DPF L G E GGFL LEEIDEA + +
Sbjct: 29 NKKNRSKKQPKRAGADTDGLSSGASTMVEDPFFVLAGGKE--GGFLDLEEIDEADFGIFG 86
Query: 77 -QIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDG---------DEDGNGVQKEQEKNLK 126
+ + + K+K+ + + GDG+G + D V+K ++K
Sbjct: 87 GVLDDVGQSVEEAGKDHGKKKKKTKKRKRGGDGEGFSGDAALVVENDQVDVEKVEKKVED 146
Query: 127 NQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTE--------------- 171
+KG KK K+K K + V+++ +D + + + TE
Sbjct: 147 GEKGDKKGKRKMNMKKRKVKDNEMNRESDEDVASDKAEDMQDDTENMEQNEDDELILGED 206
Query: 172 -FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
AW ELRLHPLL+K++ RLGFKEPTPIQK+C PAAAH+GKD+IGAAETGSGKTLAFGL
Sbjct: 207 DVSAWRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHRGKDVIGAAETGSGKTLAFGL 266
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
P++QRLLEEREKA + L+++ E+ E+ + LRALI+TPTRELA QV DHLK+VAK +
Sbjct: 267 PVLQRLLEEREKATR-LQQEDEKMEERSCGSPLRALILTPTRELAKQVCDHLKDVAKFLG 325
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+ VVPIVGG+S EKQERLLK +PE+VVGTPGRLWE MS +HLVELH+LSFF+LDEADR
Sbjct: 326 IHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWEHMSMNNQHLVELHSLSFFILDEADR 385
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
MIE GHFRELQSII+MLP+TNGS E + C TV LQ KKRQT VFSAT+ALS++F
Sbjct: 386 MIERGHFRELQSIIEMLPLTNGSGEQAARTMPNCETVPILQIKKRQTFVFSATLALSSNF 445
Query: 411 RKKLKHGSLKLKQSV-NGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
RKKLK G K S + ++SIE LS++AGM++N IVDLT S+L KLEESFIE
Sbjct: 446 RKKLKRGLSTSKASTPDDVSSIEALSKQAGMKSNAEIVDLTKASILPEKLEESFIE 501
>gi|242076434|ref|XP_002448153.1| hypothetical protein SORBIDRAFT_06g022240 [Sorghum bicolor]
gi|241939336|gb|EES12481.1| hypothetical protein SORBIDRAFT_06g022240 [Sorghum bicolor]
Length = 807
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/311 (65%), Positives = 249/311 (80%), Gaps = 6/311 (1%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDII 215
D +E ++ E ++S W ELRLHPLL+K++ RLGFKEPTPIQK+C PAAAHQGKD+I
Sbjct: 200 DKDDELILGEDDVSE----WRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHQGKDVI 255
Query: 216 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 275
GAAETGSGKTLAFGLPI+QRLLEEREKA + L ++G++ ++ + LRALI+TPTRELA
Sbjct: 256 GAAETGSGKTLAFGLPILQRLLEEREKAAR-LHQEGDKMDERSGGSPLRALILTPTRELA 314
Query: 276 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 335
QV DHLK+ AK + + VVPIVGG+S EKQERLLK +PE+VVGTPGRLWE MS +HLV
Sbjct: 315 KQVCDHLKDAAKFLGIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWEHMSMNNQHLV 374
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
ELH+LSFFVLDEADRMIE GHFRELQSII+MLP+TNGS+E ++ C TV +LQ KKR
Sbjct: 375 ELHSLSFFVLDEADRMIERGHFRELQSIIEMLPLTNGSDEQSAKTMPNCETVPNLQIKKR 434
Query: 396 QTLVFSATIALSADFRKKLKHGSLKLKQSV-NGLNSIETLSERAGMRANVAIVDLTNVSV 454
QT VFSAT+ALS++FRKKLK G K S + ++SIE LS++AGM+ N IVDLT S+
Sbjct: 435 QTFVFSATLALSSNFRKKLKRGLSTSKASTPDDVSSIEALSKQAGMKPNAEIVDLTKASI 494
Query: 455 LANKLEESFIE 465
L KLEESFIE
Sbjct: 495 LPEKLEESFIE 505
>gi|115459372|ref|NP_001053286.1| Os04g0510400 [Oryza sativa Japonica Group]
gi|158513183|sp|A2XVF7.2|RH13_ORYSI RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|158513708|sp|A3AVH5.2|RH13_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|32488303|emb|CAE03369.1| OSJNBb0065L13.12 [Oryza sativa Japonica Group]
gi|113564857|dbj|BAF15200.1| Os04g0510400 [Oryza sativa Japonica Group]
gi|116311068|emb|CAH67998.1| OSIGBa0157K09-H0214G12.9 [Oryza sativa Indica Group]
Length = 832
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/296 (68%), Positives = 239/296 (80%), Gaps = 1/296 (0%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E AW ELRLHPLL+ ++ RLGFKEPTPIQKAC PAAAHQGKD+IGAAETGSGKTLAFGL
Sbjct: 196 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGL 255
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
PI+QRLLEE+EKA ++ E ++ + + LRALI+TPTRELA QV DHLKE AK +
Sbjct: 256 PILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFLR 315
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
++VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HL++LH+LSFFVLDEADR
Sbjct: 316 IQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADR 375
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
MIE GHF ELQSII+MLP+TNGS+E T +C TV LQ KKRQT VFSAT+ALSA+F
Sbjct: 376 MIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSANF 435
Query: 411 RKKLKHGSLKLKQSVN-GLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
RKKLK G + K S + L+SIE LS++A M+ N IVDLT S+L KLEESFIE
Sbjct: 436 RKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIE 491
>gi|218195193|gb|EEC77620.1| hypothetical protein OsI_16604 [Oryza sativa Indica Group]
Length = 776
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/296 (68%), Positives = 239/296 (80%), Gaps = 1/296 (0%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E AW ELRLHPLL+ ++ RLGFKEPTPIQKAC PAAAHQGKD+IGAAETGSGKTLAFGL
Sbjct: 140 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGL 199
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
PI+QRLLEE+EKA ++ E ++ + + LRALI+TPTRELA QV DHLKE AK +
Sbjct: 200 PILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFLR 259
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
++VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HL++LH+LSFFVLDEADR
Sbjct: 260 IQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADR 319
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
MIE GHF ELQSII+MLP+TNGS+E T +C TV LQ KKRQT VFSAT+ALSA+F
Sbjct: 320 MIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSANF 379
Query: 411 RKKLKHGSLKLKQSVN-GLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
RKKLK G + K S + L+SIE LS++A M+ N IVDLT S+L KLEESFIE
Sbjct: 380 RKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIE 435
>gi|222629189|gb|EEE61321.1| hypothetical protein OsJ_15428 [Oryza sativa Japonica Group]
Length = 776
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/296 (68%), Positives = 239/296 (80%), Gaps = 1/296 (0%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E AW ELRLHPLL+ ++ RLGFKEPTPIQKAC PAAAHQGKD+IGAAETGSGKTLAFGL
Sbjct: 140 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGL 199
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
PI+QRLLEE+EKA ++ E ++ + + LRALI+TPTRELA QV DHLKE AK +
Sbjct: 200 PILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFLR 259
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
++VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HL++LH+LSFFVLDEADR
Sbjct: 260 IQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADR 319
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
MIE GHF ELQSII+MLP+TNGS+E T +C TV LQ KKRQT VFSAT+ALSA+F
Sbjct: 320 MIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSANF 379
Query: 411 RKKLKHGSLKLKQSVN-GLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
RKKLK G + K S + L+SIE LS++A M+ N IVDLT S+L KLEESFIE
Sbjct: 380 RKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIE 435
>gi|168023770|ref|XP_001764410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684274|gb|EDQ70677.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/332 (53%), Positives = 231/332 (69%), Gaps = 16/332 (4%)
Query: 135 KKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFK 194
+K++ +I+ +E + ++ DD EE + AW +LRL+PLLM+++ +L F
Sbjct: 79 RKREDMEIERLENTPSIEA--DDIEE---------IDMSAWAQLRLNPLLMRALMKLKFS 127
Query: 195 EPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEA 254
+PT IQ+ CI AAA+QGKD+IGAAETGSGKTLAFGLPI+QRLL++ EK + + ++A
Sbjct: 128 KPTHIQEKCIAAAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDDHEKIQR--KSGFDKA 185
Query: 255 EKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPE 314
K G LRALI+TPTRELALQV DHL+ A+ N VVPIVGGM+ +KQ+RLL+ +P+
Sbjct: 186 SKKQSGGPLRALIVTPTRELALQVCDHLRAAAQFTNFNVVPIVGGMALQKQQRLLRYQPQ 245
Query: 315 LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 374
+VVGTPGRLWELMS GE HL++L LSFFVLDEADRM+E GHF+ELQSI+DMLP T +
Sbjct: 246 IVVGTPGRLWELMSAGEAHLLDLAQLSFFVLDEADRMVERGHFKELQSIMDMLPKTGPED 305
Query: 375 EGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQ-SVNGLNSIET 433
E + + + KKRQTLVFSAT++L F+KKLK G K S S+ +
Sbjct: 306 TTMKEDFTETIVIEPV--KKRQTLVFSATLSLPPGFKKKLKRGFFNDKSTSKKNEYSVAS 363
Query: 434 LSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
L +RA MR N I+DLT VLA KLEES I+
Sbjct: 364 LIQRAAMRDNAVIIDLTTKDVLARKLEESVIQ 395
>gi|302781030|ref|XP_002972289.1| hypothetical protein SELMODRAFT_97519 [Selaginella moellendorffii]
gi|300159756|gb|EFJ26375.1| hypothetical protein SELMODRAFT_97519 [Selaginella moellendorffii]
Length = 524
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/291 (59%), Positives = 213/291 (73%), Gaps = 14/291 (4%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
WNELRLHP L+ ++ LGF PTPIQKACIPAAAH+GKD+IGAAETGSGKTLAFG+PI+Q
Sbjct: 1 WNELRLHPSLLTALSTLGFTTPTPIQKACIPAAAHKGKDVIGAAETGSGKTLAFGIPILQ 60
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RLL+ER+K +L + A LRALI+TPTRELALQ+ DH++ VAK +++V
Sbjct: 61 RLLDERDK---LLRQNN-----VASDSPLRALIVTPTRELALQICDHIRAVAKFTDIKVA 112
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PIVGG+ST+KQERLLK RP +VVGTPGRLWELMS GE HLV+L +SFF+LDEADRMIE
Sbjct: 113 PIVGGISTQKQERLLKRRPAIVVGTPGRLWELMSSGESHLVQLQEISFFILDEADRMIEK 172
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
GHF+EL+SIID+LP E ++ +K+RQTLVFSAT+ L DF+KKL
Sbjct: 173 GHFQELESIIDLLPKHGEPREDLDPADNVFLSA----KKRRQTLVFSATLTLPPDFKKKL 228
Query: 415 KHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
K K+S +S+ LSERAG+ +VDLT+ +V+A KL ES IE
Sbjct: 229 KKSYGARKKSEQ--HSLSLLSERAGLSDTAEVVDLTSKNVVAEKLTESVIE 277
>gi|302804899|ref|XP_002984201.1| hypothetical protein SELMODRAFT_119748 [Selaginella moellendorffii]
gi|300148050|gb|EFJ14711.1| hypothetical protein SELMODRAFT_119748 [Selaginella moellendorffii]
Length = 521
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 174/292 (59%), Positives = 215/292 (73%), Gaps = 15/292 (5%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
WNELRLHP L++++ LGF PTPIQKACIPAAAH+GKD+IGAAETGSGKTLAFG+PI+Q
Sbjct: 1 WNELRLHPSLLRALSILGFTTPTPIQKACIPAAAHKGKDVIGAAETGSGKTLAFGIPILQ 60
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQV-TDHLKEVAKGINVRV 293
RLL+ER+K +L + A LRALI+TPTRELALQV DH++ VAK +++V
Sbjct: 61 RLLDERDK---LLRQNN-----VASDSPLRALIVTPTRELALQVICDHIRAVAKFTDIKV 112
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
PIVGG+ST+KQERLLK RP +VVGTPGRLWELMS GE HLV+L +SFF+LDEADRMIE
Sbjct: 113 APIVGGISTQKQERLLKRRPAIVVGTPGRLWELMSSGESHLVQLQEISFFILDEADRMIE 172
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 413
GHF+EL+SIID+LP S E ++ +K+RQTLVFSAT+ L DF+KK
Sbjct: 173 KGHFQELESIIDLLPKHGESREDLDPADNVFLSA----KKRRQTLVFSATLTLPPDFKKK 228
Query: 414 LKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
LK K+S +S+ LSERAG+ +VDLT+ +V+A KL ES IE
Sbjct: 229 LKKSYGARKKSEQ--HSLSLLSERAGLSDTAEVVDLTSKNVVAEKLTESVIE 278
>gi|147810431|emb|CAN65340.1| hypothetical protein VITISV_038405 [Vitis vinifera]
Length = 458
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/280 (59%), Positives = 192/280 (68%), Gaps = 31/280 (11%)
Query: 18 PN-RRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GF 63
PN RRKRT + + E+L SL WN S D DPF+ VGS+EL+G GF
Sbjct: 6 PNARRKRTAVNPDLERLESLPWNPSLPDVD-DPFSLFVGSDELEGALHGFSRETSGESGF 64
Query: 64 LSLEEIDEASYNLQI--PKPE--KGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQK 119
LSLEEIDE+ Y L+I P PE KG P + +KKRK S N+ GDG ED G ++
Sbjct: 65 LSLEEIDESEYGLEIHEPGPEDKKGNPKQSKKSKKRKSSGDND---SSGDGVED--GTEE 119
Query: 120 EQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELR 179
E +K KKKKKKK KK +T EES TV + DD E + V EA EF WNELR
Sbjct: 120 EVVDKKNFKKKKKKKKKKVTKKNQTNEESATVVD-KDDVEGDSVDEA----EFYEWNELR 174
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEE 239
+HPLLMKSI+RLGFK+PTPIQKACIPAAAHQGKD++GA+ETGSGKTLA GLPI+QRLLEE
Sbjct: 175 IHPLLMKSIHRLGFKQPTPIQKACIPAAAHQGKDVVGASETGSGKTLALGLPILQRLLEE 234
Query: 240 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVT 279
REKA + L E GE EKYA G LRALIITPTRELALQ+T
Sbjct: 235 REKAAEPLAENGE--EKYAEGGILRALIITPTRELALQIT 272
>gi|412987724|emb|CCO20559.1| predicted protein [Bathycoccus prasinos]
Length = 951
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 168/436 (38%), Positives = 229/436 (52%), Gaps = 73/436 (16%)
Query: 39 NSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKPGKKTNTKKRKRS 98
N+++ A D + FLVGS+E GF+SLE L + K E K KT T +K +
Sbjct: 76 NNNWHAIDVNS-QFLVGSSE--EGFVSLEV-------LSLEK-EGEKDDAKTKTTVKKSA 124
Query: 99 SANEEDPGDG--------DGDEDGNGVQKEQEKN-LKNQKGKKKKKKKKGKKIKTVEESV 149
S N+ D DG + + D NG +KE K+ N K + K+KK K K E
Sbjct: 125 SKNDID-DDGSITVRKEKEKENDENGEKKEATKSKASNAKEARILKRKKRWKEKVEEAKK 183
Query: 150 TVSNGPDDA---------------EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFK 194
N D+A E E + AW + LHPLL+K+I +L F
Sbjct: 184 RKRNEKDEAKRGDGETAGGGGGDYENEDDDLLGDEEDVAAWAQYDLHPLLLKAIRKLRFT 243
Query: 195 EPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEA 254
PTPIQ+ + A DI+GAAETGSGKTLAFGLPI+QRL++++E+ E EE
Sbjct: 244 SPTPIQEKVLHPAIKGRMDIVGAAETGSGKTLAFGLPILQRLMQDKEEEKWYEEYADEEK 303
Query: 255 EKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPE 314
K HLRALI+TPTRELALQV L +VA +++ IVGGMS +KQER+LK +PE
Sbjct: 304 PGKGKK-HLRALIVTPTRELALQVAKMLADVAIYTGIQIAAIVGGMSKQKQERVLKKQPE 362
Query: 315 LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP------ 368
++V TPGRLWEL+ G+KHL L L+F LDEADRM+E GHF+EL+S+I +P
Sbjct: 363 IIVATPGRLWELIRDGDKHLTSLERLTFLTLDEADRMVERGHFKELESVIKSIPEPPETR 422
Query: 369 -----------------MTNGSNEGQSEQ-------------TQTCVTVSSLQRKKRQTL 398
T SN+ ++++ + + + RQT
Sbjct: 423 RIARSAKLTKRKQPMMAATKVSNDSKTKKGEEEEENEEKNDEESEPAADNRIMARDRQTF 482
Query: 399 VFSATIALSADFRKKL 414
VFSAT+ + + + KL
Sbjct: 483 VFSATLTVPDEVKYKL 498
>gi|330797646|ref|XP_003286870.1| hypothetical protein DICPUDRAFT_150880 [Dictyostelium purpureum]
gi|325083172|gb|EGC36632.1| hypothetical protein DICPUDRAFT_150880 [Dictyostelium purpureum]
Length = 903
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/229 (45%), Positives = 151/229 (65%), Gaps = 19/229 (8%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
+E + + W L L PL++K + LGF++PT IQ A +P A G DIIGAA+TGSG
Sbjct: 239 TEEQNQLDMSEWTALNLDPLIIKGLRSLGFEKPTEIQSAVLPVAISNGYDIIGAAQTGSG 298
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-------------------LR 264
KTLAFG+P++QR+L+ K G+ +E++GE +K + L
Sbjct: 299 KTLAFGIPMVQRILQHLRKHGQSVEKEGETRDKQIEEEGDEEEEEEEESTGRSEEHRKLY 358
Query: 265 ALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 324
+L+I PTRELA+QVT+H+K + N++VV IVGG++ ++Q+R+L RPE+VV TPGRLW
Sbjct: 359 SLVICPTRELAIQVTNHIKSIIAFTNLKVVSIVGGLAQQRQQRILTKRPEIVVATPGRLW 418
Query: 325 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 373
EL++ G KHL+EL++L +DEADRM+E GHF EL++I+ LP G+
Sbjct: 419 ELITEGHKHLIELNSLLCLGIDEADRMVEQGHFAELENILKTLPTFKGA 467
>gi|340374409|ref|XP_003385730.1| PREDICTED: hypothetical protein LOC100639442 [Amphimedon
queenslandica]
Length = 1012
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 192/346 (55%), Gaps = 57/346 (16%)
Query: 118 QKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNE 177
++ ++K L + K K +K+ KK K V +S TVS + E + +AW+
Sbjct: 519 ERRRKKQLLKARLKAKVAEKQHKKRKKVVQS-TVS----------IEEPKAVKGGEAWSS 567
Query: 178 LRLHPLLMKSIY-RLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL 236
L LH +++S+ RLGF PT IQ+ IP A + DIIGAAETGSGKTLAFGLP++ +
Sbjct: 568 LGLHDTIVRSLVDRLGFSTPTEIQQKAIPPAINGKHDIIGAAETGSGKTLAFGLPVLNYI 627
Query: 237 LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
L R++ L ALI+ PTRELALQV +H+K A N++V +
Sbjct: 628 LTNRQR--------------------LVALILMPTRELALQVVEHIKAAAYYTNIKVCAV 667
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
VGGMS+EKQ+RLLK PE+VVGTPGRLW++M HL L F ++DEADRMIE GH
Sbjct: 668 VGGMSSEKQDRLLKLCPEIVVGTPGRLWQMMKEECPHLNNFSQLRFLIIDEADRMIEQGH 727
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 416
FREL I++ L S + K QT+VFSAT+ L R+K+
Sbjct: 728 FRELTLILERLS-------------------SQVLSDKYQTMVFSATLTLP---RRKIGR 765
Query: 417 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
K K ++G SIE + +AG+ +DLT+ ++EES
Sbjct: 766 ---KRKSKMSGEESIENVILKAGLSETAVTIDLTHKHGTVERIEES 808
>gi|346471193|gb|AEO35441.1| hypothetical protein [Amblyomma maculatum]
Length = 684
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 184/314 (58%), Gaps = 31/314 (9%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+G DD+ + V + + AW + +++++ L F EPT IQ +PAA
Sbjct: 97 DGTDDSSPD-VPKVSRCDDMSAWLNCYVPEQVLRALAELKFTEPTEIQAQTLPAAIRDHM 155
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 272
DI+GAAETGSGKTLAFG+P++ ++E + L + E A + P L+AL++TPTR
Sbjct: 156 DIMGAAETGSGKTLAFGIPLLHHIMERK------LRQPEECASQAMP---LQALVLTPTR 206
Query: 273 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 332
ELA+QVT HL++VAK NVR+V ++GG+S EKQ RLLK +PE+VV TPGRLWEL+ G
Sbjct: 207 ELAIQVTRHLQDVAKYTNVRIVNVIGGLSAEKQLRLLKRKPEIVVATPGRLWELVDQGAP 266
Query: 333 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 392
H+ ++ + + V+DEADRM+E GHF +L ++++ M S EG ++
Sbjct: 267 HVSDVSKVRYLVIDEADRMVEKGHFEDLTRLLEV--MNAPSEEGA-------------EK 311
Query: 393 KKRQTLVFSATIALSADFRKKL--KHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
++RQ VFSAT+ + D K++ KH KL + +E L G+ + +VDLT
Sbjct: 312 RRRQNFVFSATLTMVHDMPKRMKNKHKKHKLTEK----EKVEELMCTIGISSKPKVVDLT 367
Query: 451 NVSVLANKLEESFI 464
A L ES I
Sbjct: 368 RKLGTAETLCESRI 381
>gi|427788943|gb|JAA59923.1| Putative gamete proteinration [Rhipicephalus pulchellus]
Length = 691
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 176/296 (59%), Gaps = 26/296 (8%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
S + AW + +++++ L F EPT IQ +PAA DI+GAAETGSGKTLAF
Sbjct: 116 SPDMSAWLNCHVPEPVLRALAELNFTEPTEIQAQTLPAAIRDHLDIMGAAETGSGKTLAF 175
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 288
G+P++ ++E + + E K P L+AL++TPTRELA+QVT H+++VAK
Sbjct: 176 GIPLLHHIMERKSRLS------AEGDTKAMP---LQALVLTPTRELAIQVTRHIQDVAKY 226
Query: 289 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 348
NVR+V +VGG+S EKQ RLLK +PE+VV TPGRLWEL+ G H+ ++ + + V+DEA
Sbjct: 227 TNVRIVNVVGGLSAEKQLRLLKRKPEIVVATPGRLWELVDQGAPHVSDVSKVRYLVIDEA 286
Query: 349 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 408
DRM+E GHF +L ++D+ M S +G+ ++++RQ VFSAT+ +
Sbjct: 287 DRMVEKGHFEDLTRLLDI--MNAPSEDGE-------------EKRRRQNFVFSATLTMVH 331
Query: 409 DFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
D ++LK+ K K S +E L G+ + +VDLT A L ES I
Sbjct: 332 DLPRRLKNKPKKRKLSEK--EKVEELMHTIGISSKPKVVDLTRKLGTAELLCESRI 385
>gi|66812546|ref|XP_640452.1| hypothetical protein DDB_G0281841 [Dictyostelium discoideum AX4]
gi|74997024|sp|Q54TD7.1|DDX24_DICDI RecName: Full=ATP-dependent RNA helicase ddx24; AltName: Full=DEAD
box protein 24
gi|60468476|gb|EAL66480.1| hypothetical protein DDB_G0281841 [Dictyostelium discoideum AX4]
Length = 940
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 151/234 (64%), Gaps = 22/234 (9%)
Query: 158 AEEELVS-EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIG 216
+E++ +S E + + WN L PL++K + LGF +PT IQ + IP A G D+IG
Sbjct: 278 SEQKTISKEEQDQLDMSEWNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSGYDVIG 337
Query: 217 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-------------- 262
AA+TGSGKTLAFG+P++QR+L+ K G+ +E K + + +
Sbjct: 338 AAQTGSGKTLAFGIPMVQRILQHLRKHGQNVENKANKQQNDNDDENEDVEEEEEEEEEEG 397
Query: 263 -------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 315
L +L+I PTRELA+QVT+H+K + N++V+ IVGGM++++Q+R+L RPE+
Sbjct: 398 RSKEYRKLFSLVICPTRELAIQVTNHIKSIISHTNLKVISIVGGMASQRQQRVLSKRPEI 457
Query: 316 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
VV TPGRLWEL++ G +HLVEL +L +DEADRM+E GHF EL+SI+ LP+
Sbjct: 458 VVATPGRLWELITEGHQHLVELESLLCLGIDEADRMVEQGHFAELESILKTLPI 511
>gi|145353253|ref|XP_001420934.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581170|gb|ABO99227.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 394
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 129/199 (64%), Gaps = 19/199 (9%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
+ AW E LHPL+M++I GF PTPIQ+ C+ A DIIGAA+TGSGKTLAF
Sbjct: 14 CDVSAWFEFDLHPLIMRAIQDCGFTTPTPIQRECLLPATKGRCDIIGAAQTGSGKTLAFA 73
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 289
LPI+QRLL + G + LRALI+ PTRELALQV ++ VA
Sbjct: 74 LPILQRLLSQ-----------GIDV--------LRALIVAPTRELALQVCAMMRAVAVYT 114
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
+ V P+VGGMS EKQERLL +P ++V TPGR+W+ M G +HL EL LSFFVLDEAD
Sbjct: 115 KIDVCPVVGGMSKEKQERLLNRKPAVIVATPGRMWDTMQSGHEHLTELSALSFFVLDEAD 174
Query: 350 RMIENGHFRELQSIIDMLP 368
RM+E GHF EL SII +P
Sbjct: 175 RMVERGHFSELTSIIQNIP 193
>gi|3776003|emb|CAA09204.1| RNA helicase [Arabidopsis thaliana]
Length = 451
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 131/153 (85%), Gaps = 1/153 (0%)
Query: 314 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 373
E+VV TPGRLWELMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+
Sbjct: 1 EIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKP 60
Query: 374 NEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-LNSIE 432
NEG+++ ++ TV ++ +KKRQT VFSATIALS+DFRKKLK GS K KQS +G +NSIE
Sbjct: 61 NEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIE 120
Query: 433 TLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
LSERAGMR NVAI+DLT S+LA K+EESFI+
Sbjct: 121 VLSERAGMRDNVAIIDLTTTSILAPKIEESFIK 153
>gi|156404211|ref|XP_001640301.1| predicted protein [Nematostella vectensis]
gi|156227434|gb|EDO48238.1| predicted protein [Nematostella vectensis]
Length = 566
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 156/242 (64%), Gaps = 5/242 (2%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L + P +++++ GF +PTPIQ IP A +DIIGAAETGSGKTLAFG+PI+Q
Sbjct: 4 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQ 63
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ E K K + ++ +G+ L ALI+ PTRELALQV DHL + AK +V+V
Sbjct: 64 HI--EAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKV 121
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
IVGGM+ KQ+RLLK RPE+VV TPGRLWEL+S E+H+ + L + V+DEADRM+E
Sbjct: 122 AAIVGGMAAPKQQRLLKQRPEIVVATPGRLWELISQQEEHVSNIQLLRYLVIDEADRMVE 181
Query: 354 NGHFRELQSIIDMLPM-TNGSNEGQSEQTQTCVTVSSLQRKKR-QTLVFSATIALSADFR 411
GH+ EL SI++++ + +G+ E E + S K R Q +FSAT+ L F+
Sbjct: 182 QGHYEELSSILELIHLKKSGNMEVDQEDAERPSNSSKTPEKARLQKFIFSATLTLPKSFK 241
Query: 412 KK 413
K+
Sbjct: 242 KR 243
>gi|281207739|gb|EFA81919.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 932
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 137/222 (61%), Gaps = 23/222 (10%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
+ AWN+ L PLL+K + LG+ EPT IQ IPAA G DIIGAAETGSGKTLAFG
Sbjct: 309 VDISAWNQYDLDPLLVKGLKALGYGEPTEIQSQVIPAALKNGLDIIGAAETGSGKTLAFG 368
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAE-KYAP----------------------KGHLRAL 266
+P++ +L +E++ + K P +GHL +L
Sbjct: 369 IPMLHNILTYLRSINHPVEKQNINVDGKMKPLVEQDDEEEEEEEEEEETATRKQGHLYSL 428
Query: 267 IITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWEL 326
I+ PTRELA+QV +HLK ++ + VV +VGGM+ +KQ RLL RPE+VV TPGRLWEL
Sbjct: 429 IMCPTRELAIQVANHLKSISYFTTISVVTVVGGMAAQKQIRLLGRRPEIVVATPGRLWEL 488
Query: 327 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 368
+ G +HL++L L F +DEADRM+E GHF E+ SI+ MLP
Sbjct: 489 IQDGNEHLLDLTHLMCFGIDEADRMVEKGHFAEVDSILKMLP 530
>gi|440796416|gb|ELR17525.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 926
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 137/194 (70%), Gaps = 9/194 (4%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W LHP LM++I F PTPIQ+ + AA + KD++G AETGSGKTLA+GLPI+
Sbjct: 256 SWQHFNLHPTLMEAIKEYKFFSPTPIQEKALTAALREDKDVVGVAETGSGKTLAYGLPIL 315
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+L ++RE+ E G E ++ L+AL++ PTRELA+QV+D LK +AK + V
Sbjct: 316 HKLTKKREQE----ERDGVEKDR-----RLKALLLAPTRELAVQVSDQLKLIAKHTPITV 366
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
VP++GG++ +KQ RLL +PE+VV TPGRLWEL++GG+ L + L F V+DEADRM+E
Sbjct: 367 VPVIGGLAPQKQVRLLSKKPEIVVATPGRLWELINGGDPFLGDCTGLEFLVIDEADRMVE 426
Query: 354 NGHFRELQSIIDML 367
GHFREL+SII ++
Sbjct: 427 TGHFRELKSIITLI 440
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 394 KRQTLVFSATIALSADFRKKL--KHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTN 451
KRQT +FSAT+ +++ R KL K + + +VN L + L G ++DLT
Sbjct: 572 KRQTFIFSATLTIASQGRAKLGPKPSTNSNRAAVNALAQVSKL---VGFEREKKVIDLTT 628
Query: 452 VSVLANKLEESFIE 465
V+ + LEE+ I+
Sbjct: 629 KKVVVSTLEEAVIQ 642
>gi|348531313|ref|XP_003453154.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Oreochromis niloticus]
Length = 847
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 179/345 (51%), Gaps = 71/345 (20%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
+ + AW +L + P +++++ LGF PTPIQ C+P A DI+GAAETGSGKTLAF
Sbjct: 238 NVDMSAWKDLFVPPPVLRALSSLGFGSPTPIQALCLPPAIRDRMDILGAAETGSGKTLAF 297
Query: 229 GLPIMQRLLE----EREKAGKMLEEKGEEAEKY--------------------------- 257
G+PI+ +LE E K+ + +E+G EA K
Sbjct: 298 GIPIIHTILEWKHNEYTKSAEEDQEEGVEASKENDEDAEDQNQGDSDEDEHSDVEDEQLG 357
Query: 258 --------------APKGH----LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGG 299
P G L L++TPTRELA+QV H+ VAK +++ +VGG
Sbjct: 358 CVRVIKNADFDFDEKPAGAQSRPLLGLVLTPTRELAVQVKHHIDAVAKFTDIKTALVVGG 417
Query: 300 MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 359
M+ +KQ R+LK RPE+++ TPGRLW+L+ HLV L L V+DEADRM+E GHF E
Sbjct: 418 MAQQKQRRVLKRRPEIIIATPGRLWDLIKERHPHLVNLRQLRCLVIDEADRMVERGHFAE 477
Query: 360 LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSL 419
L+++++ML T+ + RQT VFSAT+ + +L
Sbjct: 478 LENLLEMLNTTHFN-------------------PTRQTFVFSATLTMVHSLPTRLLQ--- 515
Query: 420 KLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
K K++++ N +E L E+ G+++ +VDLT L E+ I
Sbjct: 516 KKKKNLDQRNKLEILMEKVGIKSKPKVVDLTRKEATVETLIETQI 560
>gi|198437354|ref|XP_002125842.1| PREDICTED: similar to CG9143 CG9143-PA [Ciona intestinalis]
Length = 719
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 174/319 (54%), Gaps = 47/319 (14%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
+ + AW L + ++K++ L F +P PIQ+ CIP A +DI+GAAETGSGKTLAF
Sbjct: 159 TVDMSAWQNLYVPETVLKALAELRFTKPMPIQEQCIPVAIRDKRDILGAAETGSGKTLAF 218
Query: 229 GLPIMQRLLEEREKAGKMLEE----------------------KGEEAEKYAPKGHLRAL 266
G+P++ L+E+RE+ +LE EE E+ P L AL
Sbjct: 219 GIPLLHHLMEDRER--NLLENTENAEIDEDDEHMSDFEDAEPVSKEEIEETQPTKALPAL 276
Query: 267 IITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWEL 326
++TPTRELA+QV HL +VAK + +VGGM+ +KQ RLL P++V+ TPGRLWEL
Sbjct: 277 VLTPTRELAIQVKKHLTQVAKHTKLWSTVVVGGMAQQKQIRLLNKEPDIVIATPGRLWEL 336
Query: 327 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT 386
+ G +L +H L + V+DEADRM+E+GHF EL +++++ +
Sbjct: 337 LESGHPYLSTIHKLRYLVIDEADRMLEHGHFEELNKLLEVINLKKS-------------- 382
Query: 387 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNS-IETLSERAGMRANVA 445
+ KRQT +FSAT+ + F + + S N ++ + L ++ G+R
Sbjct: 383 -----KTKRQTFIFSATLT-TVHFTP--NRPNFPTQASSNTKDTKLSKLMKKIGVRNKPF 434
Query: 446 IVDLTNVSVLANKLEESFI 464
+ DLT + A KL E+ I
Sbjct: 435 VADLTTKKLTAEKLSEAKI 453
>gi|428175672|gb|EKX44561.1| hypothetical protein GUITHDRAFT_109675 [Guillardia theta CCMP2712]
Length = 748
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 181/313 (57%), Gaps = 29/313 (9%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E++ WN + L L+K++ GF++PT IQ+ IPAA + +DI GAAETGSGKTLAF L
Sbjct: 186 EYEEWNCVMLRKCLVKALKEQGFEQPTAIQELVIPAAMAKRQDIFGAAETGSGKTLAFAL 245
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
P++QR+L+ +G +E+ L L+++PTRELA+QV DH+ A+
Sbjct: 246 PMLQRILDSHNFSGIDAKER-----------KLAGLVLSPTRELAIQVRDHIVAAARFTK 294
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
++VV +VGG+S +KQ+R L P +VVGTPGRLWE M G ++L EL+ L V+DEADR
Sbjct: 295 IKVVAVVGGLSMQKQQRQLAMHPHIVVGTPGRLWEQMRLGNEYLRELNMLLCLVIDEADR 354
Query: 351 MIENGHFRELQSIIDMLPMTN--GSNEGQSEQTQTCVTVSSLQRKK-----------RQT 397
M+E GHF+EL++I+++LP + + +S + + ++S Q K RQT
Sbjct: 355 MMETGHFQELENILNLLPDLDPKAKQKRESNEEEEEEEITSFQATKGSKLHAQRHYRRQT 414
Query: 398 LVFSATIALSADFRKKLKHGSLKLKQSVNG-----LNSIETLSERAGMRANVAIVDLTNV 452
++FSAT+ +R K + ++ SIE L +R + I DLT
Sbjct: 415 MIFSATLIKDIQWRSTKKVKRKEKRKQPETSADVRRQSIERLIDRLQLPEEPVIFDLTPS 474
Query: 453 SVLANKLEESFIE 465
++ K+ + +E
Sbjct: 475 GKVSEKIAQYRVE 487
>gi|308810583|ref|XP_003082600.1| RNA Helicase (ISS) [Ostreococcus tauri]
gi|116061069|emb|CAL56457.1| RNA Helicase (ISS) [Ostreococcus tauri]
Length = 1211
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 171/334 (51%), Gaps = 46/334 (13%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
+ AW E LHPL++++I GF PTPIQ+ C+ A DIIGAA+TGSGKTLAF
Sbjct: 266 CDISAWFEFDLHPLILRAIQDCGFTSPTPIQRECLHPATKGRYDIIGAAQTGSGKTLAFA 325
Query: 230 LPIMQRLLEEREKAGKMLEEK-----GEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 284
LPI+ RLL E G L E G+E E LRALI+ PTRELALQV ++
Sbjct: 326 LPILHRLLSE----GIGLPEDYPLKDGKEREVL--PDVLRALIVCPTRELALQVCAMMRA 379
Query: 285 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
VA + V P+V + L P ++V TPGRLW+ M G + E LSFFV
Sbjct: 380 VAVYTKIDVCPVVRWYVEREARATLNRMPAIIVATPGRLWDTMQSGHAAVTEFGALSFFV 439
Query: 345 LDEADRMIENGHFRELQSIIDML---------------------PMTNGSNEGQSEQTQT 383
LDEADRMI+ GHF+EL SII + P+ N + +
Sbjct: 440 LDEADRMIQRGHFKELTSIIQNIPEPPRVKRAGGAAKSKEESDAPVDNFAEDEDDVNRAK 499
Query: 384 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLK----QSVNGLNSIETLS 435
+ + Q RQT VFSAT+ + R+KLK G S K + Q +G S+E+L
Sbjct: 500 ALALRPKQMLDRQTFVFSATLTVPDSVRRKLKKGKAPTSAKPRKGSAQPQSG--SLESLM 557
Query: 436 ERAGMRANVAIVDLTNV----SVLANKLEESFIE 465
E V +VDLT + +A+ + ES +E
Sbjct: 558 EAVPFYGRVKMVDLTPIERKGGAVASSIAESALE 591
>gi|196008359|ref|XP_002114045.1| hypothetical protein TRIADDRAFT_58110 [Trichoplax adhaerens]
gi|190583064|gb|EDV23135.1| hypothetical protein TRIADDRAFT_58110 [Trichoplax adhaerens]
Length = 685
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 184/355 (51%), Gaps = 83/355 (23%)
Query: 113 DGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEF 172
DG G E KN+ KK KK K VEE TV N DD ++ +
Sbjct: 41 DGTGKVSEVTNRSKNKSVKKTPKKDANK----VEEESTVENPHDDGKDNV--------NM 88
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPI 232
AW+ L++ ++K++ + F PTPIQ + AA KDIIGAAETGSGKTLA+G+PI
Sbjct: 89 KAWDSLQVPEPVLKALSDMNFLTPTPIQSLSLVAAIRDRKDIIGAAETGSGKTLAYGIPI 148
Query: 233 MQRLLEEREKAGKMLEEKGEEAE------KYAP---KGH--------------------- 262
+QR+L+ + K + K ++A K P + H
Sbjct: 149 IQRILQLKADGKKSSKRKWDKANNKTEVIKETPSKKRKHEKGAKPTSSTSDQKSSNKTTV 208
Query: 263 ------------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLK 310
+ AL++TPTRELALQV DHL+ AK ++++ IVGG+S KQ+RLL
Sbjct: 209 DNMDNSEVAESPVYALVLTPTRELALQVRDHLRSAAKYTDLKIEAIVGGISQHKQQRLLN 268
Query: 311 ARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 370
+PE+++ TPGR+W+L+S GE HL ++ L VLDE DRMIE GH+ EL I++ LP
Sbjct: 269 YQPEIIIATPGRMWQLLSEGESHLQTINKLPLLVLDEVDRMIEYGHYAELSDILERLP-- 326
Query: 371 NGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSV 425
+R RQTLV+SAT+ ++ K+ +++K+SV
Sbjct: 327 --------------------ERPLRQTLVYSATLTIN-------KNKKVEMKKSV 354
>gi|384498821|gb|EIE89312.1| hypothetical protein RO3G_14023 [Rhizopus delemar RA 99-880]
Length = 808
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 178/313 (56%), Gaps = 26/313 (8%)
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDI 214
P+ + + + + S + AW + L ++ ++ F PTPIQ+ +P A QG+DI
Sbjct: 233 PEPKKRPTIDDVDQSVDVSAWKDFELAQPIVNALKYHKFSSPTPIQEKTLPLAL-QGRDI 291
Query: 215 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 274
+G+AETGSGKTLAFG+PI+Q L K L LI+TPTREL
Sbjct: 292 VGSAETGSGKTLAFGIPIVQYLATHE-------------------KEDLSGLILTPTREL 332
Query: 275 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 334
A+QV DH+ VA ++R V IVGGMS +KQERLLK +P+++V TPGRLWEL SG ++++
Sbjct: 333 AIQVKDHIANVALFTDIRCVAIVGGMSAQKQERLLKGKPDIIVATPGRLWELFSGNQEYM 392
Query: 335 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT-QTCVTVSSLQRK 393
L + F VLDEADRM+E GHF EL +I++ L + E+ Q +
Sbjct: 393 DMLKRIKFLVLDEADRMLEKGHFEELTNILNTLSTKRQTTTDWPEEIGQGNRKILPQDLG 452
Query: 394 KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGM-RANVAIVDLTNV 452
QT +++AT LS D R +K + K K + +++ L R A++D+T+
Sbjct: 453 VHQTFIYTAT--LSKDIRFNVK--AKKRKATAQPTGTMDDLLSRIEFADQEPALIDMTSE 508
Query: 453 SVLANKLEESFIE 465
+++A++L E+ I+
Sbjct: 509 NIVASRLLEAKID 521
>gi|198458698|ref|XP_002138576.1| GA24853 [Drosophila pseudoobscura pseudoobscura]
gi|198136429|gb|EDY69134.1| GA24853 [Drosophila pseudoobscura pseudoobscura]
Length = 807
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 181/341 (53%), Gaps = 63/341 (18%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
+ E E AWN L + +++++ GFK PT IQ +PAA H KDI+GAAETGSG
Sbjct: 199 ASTEYKDELSAWNGLGVPSNILRALAEQGFKAPTQIQSMTLPAAIHGKKDILGAAETGSG 258
Query: 224 KTLAFGLPIMQRLLEEREK-------------------------------------AGKM 246
KTLAFG+P++ ++E +++ +G
Sbjct: 259 KTLAFGIPMLAGIMELKQRNASSGIRKAPKVKGAPIAPPADDEHELTPPPDELDHVSGAS 318
Query: 247 LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQE 306
E+ E + + L L++TPTRELA+QV +HL AK ++V I GG+S KQE
Sbjct: 319 DEDSDAEEREQRKQTPLYGLVLTPTRELAVQVRNHLVSAAKYTGIKVAAIFGGLSVAKQE 378
Query: 307 RLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 366
R+L+ PE+VV TPGRLWEL + G +HL +L LSF V+DE DRM+E GHF EL+S++ +
Sbjct: 379 RVLRQCPEIVVATPGRLWELFAQGNQHLNKLDDLSFLVIDETDRMVEKGHFEELRSLLKV 438
Query: 367 LPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK-----L 421
L ++E + +Q RQ VFSAT+ L D ++ ++ +
Sbjct: 439 L----NADEQKKQQ--------------RQNFVFSATLTLVHDLPDHMQKRNVGKRPKFV 480
Query: 422 KQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 481 KQTVD--QKIESLIEELGI-SQPKIVDITSTQQTAQTLTES 518
>gi|195154787|ref|XP_002018294.1| GL17630 [Drosophila persimilis]
gi|194114090|gb|EDW36133.1| GL17630 [Drosophila persimilis]
Length = 807
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 188/351 (53%), Gaps = 67/351 (19%)
Query: 158 AEEELVSEAEISTEFD----AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKD 213
++EE+ STE++ AWN L + +++++ GFK PT IQ +PAA H KD
Sbjct: 189 SDEEVPQLVPASTEYEDELSAWNGLGVPSNILRALAEQGFKAPTQIQSMTLPAAIHGKKD 248
Query: 214 IIGAAETGSGKTLAFGLPIMQRLLEEREK------------------------------- 242
I+GAAETGSGKTLAFG+P++ ++E +++
Sbjct: 249 ILGAAETGSGKTLAFGIPMLAGIMELKQRNASSGIRKAPKVKGAPIAPPADDEHELTPPP 308
Query: 243 ------AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
+G E+ E + + L L++TPTRELA+QV +HL AK ++V I
Sbjct: 309 DELDHVSGASDEDSDAEEREQRKQTPLYGLVLTPTRELAVQVKNHLVSAAKYTGIKVAAI 368
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
GG+S KQER+L+ PE+VV TPGRLWEL + G +HL +L LSF V+DE DRM+E GH
Sbjct: 369 FGGLSVAKQERVLRQCPEIVVATPGRLWELFAQGNQHLNKLDDLSFLVIDETDRMVEKGH 428
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 416
F EL+S++ +L ++E + +Q RQ VFSAT+ L D ++
Sbjct: 429 FEELRSLLKVL----NADEQKKQQ--------------RQNFVFSATLTLVHDLPDHMQK 470
Query: 417 GSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
++ +KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 471 RNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSTQQTAQTLTES 518
>gi|167538304|ref|XP_001750817.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770734|gb|EDQ84416.1| predicted protein [Monosiga brevicollis MX1]
Length = 1041
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 131/215 (60%), Gaps = 19/215 (8%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
E+ S+ + AW L+L L +++ R GF PTPIQ+A I A +D+I AA
Sbjct: 277 EDVTTSQPLADEDLAAWTVLQLDRELAEAVVRRGFTAPTPIQQAAIVPAVRDYRDVIAAA 336
Query: 219 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQ- 277
TGSGKTLAFGLP++Q +L R + L+ LI+TPTRELALQ
Sbjct: 337 PTGSGKTLAFGLPVLQHILNRRARGRST--------------AGLQCLILTPTRELALQQ 382
Query: 278 ----VTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 333
+ HLK +A ++VRV IVGGM+ KQERLLKA+PE+VVGTPGRLWE++ G H
Sbjct: 383 SLWQIQQHLKPLATPLSVRVTAIVGGMALVKQERLLKAKPEIVVGTPGRLWEIIQSGHVH 442
Query: 334 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 368
L +L F VLDEADRM+E GHF EL I+ LP
Sbjct: 443 FAHLDSLRFLVLDEADRMVERGHFAELDKILARLP 477
>gi|56201305|dbj|BAD72907.1| unnamed protein product [Drosophila simulans]
gi|56201324|dbj|BAD72925.1| unnamed protein product [Drosophila sechellia]
Length = 814
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 211/418 (50%), Gaps = 94/418 (22%)
Query: 117 VQKEQEKNLKNQKGKKKKKKKKGKKIKTVEES---------VTVSNGPDDAEEELVSEAE 167
+QK +EK K +K +K+KK KGK+ EES + P D E E V++AE
Sbjct: 130 MQKLREKREK-RKELRKQKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEAEEVAKAE 188
Query: 168 ISTE----------------------FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
S + AWN L + +++++ GFK PT IQ +P
Sbjct: 189 DSADQQESSDEEAPELVSIPTDEAEDVSAWNGLGVPASILRALGEQGFKTPTQIQALTLP 248
Query: 206 AAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREK------------AGKMLEEKGEE 253
AA H KDI+GAAETGSGKTLAFG+P++ ++E +++ G+ E +E
Sbjct: 249 AAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADE 308
Query: 254 AEKYAP------------------------KGHLRALIITPTRELALQVTDHLKEVAKGI 289
E P + L L++TPTRELA+QV +HL AK
Sbjct: 309 HELTPPPEELDHVSGASDEESDAEEHTQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYT 368
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
+RV I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++ +SF V+DE D
Sbjct: 369 GIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETD 428
Query: 350 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
RM+E GHF EL+S++ +L S+E + Q RQ V+SAT+ L D
Sbjct: 429 RMVEKGHFEELRSLLKVL----NSDEQKKHQ--------------RQNFVYSATLTLVHD 470
Query: 410 FRKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
++ ++ +KQSV+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 471 LPDHMQKRNVGKRPKFVKQSVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 525
>gi|20130173|ref|NP_611467.1| CG9143 [Drosophila melanogaster]
gi|7302399|gb|AAF57487.1| CG9143 [Drosophila melanogaster]
gi|33636633|gb|AAQ23614.1| LD11580p [Drosophila melanogaster]
Length = 813
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 212/417 (50%), Gaps = 93/417 (22%)
Query: 117 VQKEQEKNLKNQKGKKKKKKKKGKKIKTVEES---------VTVSNGPDDAEEELVSEAE 167
+QK +EK K +K +K+KK KGK+ EES + P D EEE+V +
Sbjct: 130 MQKLREKREK-RKELRKQKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEEEVVKAED 188
Query: 168 -----------------IST----EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA 206
IST + AWN L + +++++ GFK PT IQ +PA
Sbjct: 189 SADQQESTDEEAPELVPISTGEAEDMSAWNGLGVPASILRALGEQGFKTPTQIQALTLPA 248
Query: 207 AAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREK------------AGKMLEEKGEEA 254
A H KDI+GAAETGSGKTLAFG+P++ ++E +++ G+ E +E
Sbjct: 249 AIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADEH 308
Query: 255 EKYAP------------------------KGHLRALIITPTRELALQVTDHLKEVAKGIN 290
E P + L L++TPTRELA+QV +HL AK
Sbjct: 309 ELTPPPEELDHVSGASDEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYTG 368
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+RV I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++ +SF V+DE DR
Sbjct: 369 IRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDR 428
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
M+E GHF EL+S++ +L S+E + Q RQ V+SAT+ L D
Sbjct: 429 MVEKGHFEELRSLLKVL----NSDEQKKHQ--------------RQNFVYSATLTLVHDL 470
Query: 411 RKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
++ ++ +KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 471 PDHMQKRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 524
>gi|195336062|ref|XP_002034666.1| GM19796 [Drosophila sechellia]
gi|194126636|gb|EDW48679.1| GM19796 [Drosophila sechellia]
Length = 814
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 211/418 (50%), Gaps = 94/418 (22%)
Query: 117 VQKEQEKNLKNQKGKKKKKKKKGKKIKTVEES---------VTVSNGPDDAEEELVSEAE 167
+QK +EK K +K +K+KK KGK+ EES + P D E E V++AE
Sbjct: 130 MQKLREKREK-RKELRKQKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEAEEVAKAE 188
Query: 168 ISTE----------------------FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
S + AWN L + +++++ GFK PT IQ +P
Sbjct: 189 DSADQQESSDEEAPELVSIPTDEAEDVSAWNGLGVPASILRALGEQGFKTPTQIQALTLP 248
Query: 206 AAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREK------------AGKMLEEKGEE 253
AA H KDI+GAAETGSGKTLAFG+P++ ++E +++ G+ E +E
Sbjct: 249 AAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADE 308
Query: 254 AEKYAP------------------------KGHLRALIITPTRELALQVTDHLKEVAKGI 289
E P + L L++TPTRELA+QV +HL AK
Sbjct: 309 HELTPPPEELDHVSGASDEESDAEEHTQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYT 368
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
+RV I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++ +SF V+DE D
Sbjct: 369 GIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETD 428
Query: 350 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
RM+E GHF EL+S++ +L S+E + Q RQ V+SAT+ L D
Sbjct: 429 RMVEKGHFEELRSLLKVL----NSDEQKKHQ--------------RQNFVYSATLTLVHD 470
Query: 410 FRKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
++ ++ +KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 471 LPDHMQKRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 525
>gi|195486926|ref|XP_002091709.1| GE13811 [Drosophila yakuba]
gi|194177810|gb|EDW91421.1| GE13811 [Drosophila yakuba]
Length = 808
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 187/352 (53%), Gaps = 66/352 (18%)
Query: 156 DDAEEELVSEAEIST----EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
D ++EE IST + AWN L + +++++ GFK PT IQ +PAA H
Sbjct: 189 DSSDEEAPELVPISTSEAEDVSAWNGLGVPASILRALGEQGFKAPTQIQALTLPAAIHGK 248
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEEREK------------AGKMLEEKGEEAEKYAP 259
KDI+GAAETGSGKTLAFG+P++ ++E +++ G+ E +E E P
Sbjct: 249 KDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPP 308
Query: 260 ------------------------KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
+ L L++TPTRELA+QV +HL AK +RV
Sbjct: 309 PEELDHVSGASDEESDAEEQAQRIQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAA 368
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++ +SF V+DE DRM+E G
Sbjct: 369 IFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEKG 428
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL+S++ +L S+E + Q RQ V+SAT+ L D ++
Sbjct: 429 HFEELRSLLKVL----NSDEQKKHQ--------------RQNFVYSATLTLVHDLPDHMQ 470
Query: 416 HGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
++ +KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 471 KRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 519
>gi|189239044|ref|XP_969373.2| PREDICTED: similar to CG9143 CG9143-PA [Tribolium castaneum]
Length = 645
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 159/279 (56%), Gaps = 30/279 (10%)
Query: 134 KKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGF 193
K KK +K+ +V + + + E+ + + S + W+ L ++K++ GF
Sbjct: 62 KPAKKKRKVSSVALTPSKQGSSVETRVEINEKIQKSDSYLVWSNFGLPDSIIKALVLQGF 121
Query: 194 KEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEE 253
EPT IQ +PAA +DI+GAAETGSGKTLAFGLPI+ +L E+ K ++K
Sbjct: 122 NEPTLIQSLSLPAAVLGRRDIVGAAETGSGKTLAFGLPIVAGILNEKSKVVGNSDKK--- 178
Query: 254 AEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARP 313
L AL++TPTRELA+QV DHLK + K ++ + ++GGM+ KQER+L RP
Sbjct: 179 ---------LYALVLTPTRELAVQVRDHLKAIVKFTDINIAVVLGGMAAVKQERILSKRP 229
Query: 314 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 373
E+VV TPGRLWEL+ G +HL +++ + + +DE DRM+E GHF EL +I++ L
Sbjct: 230 EIVVATPGRLWELIQQGNEHLSQINDIRYLAIDETDRMLEKGHFEELHNILERL------ 283
Query: 374 NEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 412
+ + K+RQ VFSAT+ L D K
Sbjct: 284 ------------NLDKTRAKQRQNFVFSATLTLVHDLPK 310
>gi|270010898|gb|EFA07346.1| hypothetical protein TcasGA2_TC015943 [Tribolium castaneum]
Length = 599
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 162/279 (58%), Gaps = 30/279 (10%)
Query: 134 KKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGF 193
K KK +K+ +V + + + E+ + + S + W+ L ++K++ GF
Sbjct: 60 KPAKKKRKVSSVALTPSKQGSSVETRVEINEKIQKSDSYLVWSNFGLPDSIIKALVLQGF 119
Query: 194 KEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEE 253
EPT IQ +PAA +DI+GAAETGSGKTLAFGLPI+ +L E+ K ++K
Sbjct: 120 NEPTLIQSLSLPAAVLGRRDIVGAAETGSGKTLAFGLPIVAGILNEKSKVVGNSDKK--- 176
Query: 254 AEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARP 313
L AL++TPTRELA+QV DHLK + K ++ + ++GGM+ KQER+L RP
Sbjct: 177 ---------LYALVLTPTRELAVQVRDHLKAIVKFTDINIAVVLGGMAAVKQERILSKRP 227
Query: 314 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 373
E+VV TPGRLWEL+ G +HL +++ + + +DE DRM+E GHF EL +I++ L +
Sbjct: 228 EIVVATPGRLWELIQQGNEHLSQINDIRYLAIDETDRMLEKGHFEELHNILERLNL---- 283
Query: 374 NEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 412
++T+ K+RQ VFSAT+ L D K
Sbjct: 284 -----DKTRA---------KQRQNFVFSATLTLVHDLPK 308
>gi|194881539|ref|XP_001974888.1| GG20872 [Drosophila erecta]
gi|190658075|gb|EDV55288.1| GG20872 [Drosophila erecta]
Length = 815
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 192/366 (52%), Gaps = 69/366 (18%)
Query: 142 IKTVEESVTVSNGPDDAEEELVSEAEIST----EFDAWNELRLHPLLMKSIYRLGFKEPT 197
+ E+S + D+ ELV IST + AWN L + +++++ GFK PT
Sbjct: 185 VAKAEDSADQQDSSDEEAPELVP---ISTGEGEDVSAWNGLGVPASILRALGEQGFKAPT 241
Query: 198 PIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREK------------AGK 245
IQ +PAA H KDI+GAAETGSGKTLAFG+P++ ++E +++ G+
Sbjct: 242 QIQALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQ 301
Query: 246 MLEEKGEEAEKYAP------------------------KGHLRALIITPTRELALQVTDH 281
E +E E P + L L++TPTRELA+QV +H
Sbjct: 302 QPEPAADEHELTPPPEELDHVSGASDEESDAEEHAQRMQTPLYGLVLTPTRELAVQVKNH 361
Query: 282 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 341
L AK +RV I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++ +S
Sbjct: 362 LVAAAKYTGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVS 421
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 401
F V+DE DRM+E GHF EL+S++ +L S+E + Q RQ V+S
Sbjct: 422 FLVIDETDRMVEKGHFEELRSLLKVL----NSDEQKKHQ--------------RQNFVYS 463
Query: 402 ATIALSADFRKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLA 456
AT+ L D ++ ++ +KQ+V+ IE+L E G+ + IVD+T+ A
Sbjct: 464 ATLTLVHDLPDHMQKRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTA 520
Query: 457 NKLEES 462
L ES
Sbjct: 521 QTLTES 526
>gi|326432948|gb|EGD78518.1| hypothetical protein PTSG_12845 [Salpingoeca sp. ATCC 50818]
Length = 984
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 132/206 (64%), Gaps = 9/206 (4%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
+ AW LH +M+ + F +PTP+Q+ C+ A +DI+ AETGSGKTLAFG
Sbjct: 287 VDMSAWLPFGLHSSIMEGLQAQRFTKPTPVQEECLQPAIQGFRDIVACAETGSGKTLAFG 346
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 289
LP++Q ++ R++ + L+AL++ PTRELA+QV DHL +AK
Sbjct: 347 LPVIQHIINLRQQG---------DDGDDDALTRLKALVVCPTRELAIQVRDHLVAIAKHC 397
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
+RVV IVGG+S +KQ RLL RPE++VGTPGRLW+L++ G +L L F V+DEAD
Sbjct: 398 GIRVVAIVGGISVQKQRRLLAGRPEIIVGTPGRLWDLIAAGNDAFHDLRRLRFLVIDEAD 457
Query: 350 RMIENGHFRELQSIIDMLPMTNGSNE 375
RM+E GHF+EL++I+ LPM +++
Sbjct: 458 RMVEQGHFKELENILRKLPMAERTDD 483
>gi|320165920|gb|EFW42819.1| ATP-dependent RNA helicase DDX24 [Capsaspora owczarzaki ATCC 30864]
Length = 1137
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 131/210 (62%), Gaps = 8/210 (3%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
T+ WN LH LL+K + G+ PTPIQ+ + +DIIGA+ETGSGKTLAF
Sbjct: 429 TDMSEWNGFGLHELLIKGLATAGYARPTPIQREALLKGLRDYQDIIGASETGSGKTLAFA 488
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAE--------KYAPKGHLRALIITPTRELALQVTDH 281
LPI+Q +L R+K + G++ E K L ALI+TPTRELA Q+ +
Sbjct: 489 LPILQVILNGRDKEAARESQNGDDNEAETDAASKKVFKNRPLSALILTPTRELASQIREQ 548
Query: 282 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 341
+ +VAK ++ VV ++GG+S EKQ R+L P++VV TPGRLW+ MS G +HL EL L
Sbjct: 549 IVKVAKFTDISVVTVIGGLSAEKQRRVLSYCPDIVVATPGRLWDYMSQGNQHLTELRYLR 608
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTN 371
VLDEADRM+ GHF EL I+ +LP+ N
Sbjct: 609 HLVLDEADRMVATGHFEELTKILAILPVQN 638
>gi|242022824|ref|XP_002431838.1| ATP-dependent RNA helicase MAK5, putative [Pediculus humanus
corporis]
gi|212517170|gb|EEB19100.1| ATP-dependent RNA helicase MAK5, putative [Pediculus humanus
corporis]
Length = 543
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 163/288 (56%), Gaps = 25/288 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+WN +H ++ ++Y + EPT IQ C+ A DI+GAAETGSGKTLAFG+PI+
Sbjct: 3 SWNSFGIHEKILYALYDKKYFEPTKIQSRCLGPAICGQMDILGAAETGSGKTLAFGIPIV 62
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+L EK L + E + K +L ALI+TPTRELA+QV +HL ++ K + +
Sbjct: 63 NGILSIMEKE---LNQSIESLKMKNEKNNLYALILTPTRELAVQVRNHLNDICKYTKINI 119
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
IVGG++ EKQER+L RPE++V TPGRLWEL++ HL + L + +DE DRM+E
Sbjct: 120 ALIVGGLAHEKQERILNKRPEIIVATPGRLWELVNDNNIHLSNIKNLRYLAIDETDRMLE 179
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 413
GHF EL +++ + + NE ++KKRQ +FSAT+ + D
Sbjct: 180 KGHFTELNDLLERINL----NEN--------------KKKKRQNFLFSATLTVVHDPPSY 221
Query: 414 LKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEE 461
LK K + + ++ L + G+ N IVD+TN V A L E
Sbjct: 222 LKG---KKNKRITPGQKLQDLISKIGI-TNPKIVDITNTHVTAENLSE 265
>gi|119193909|ref|XP_001247558.1| hypothetical protein CIMG_01329 [Coccidioides immitis RS]
gi|118574275|sp|Q1E7Y4.1|MAK5_COCIM RecName: Full=ATP-dependent RNA helicase MAK5
gi|392863201|gb|EAS36075.2| ATP-dependent RNA helicase MAK5 [Coccidioides immitis RS]
Length = 783
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 158/503 (31%), Positives = 245/503 (48%), Gaps = 82/503 (16%)
Query: 20 RRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GFLSL 66
+R K A+ + K+N++ + + +D +V ++LD GF L
Sbjct: 4 KRSHNHKDHTAKAIKRRKFNAATAKSSDDAAHDIVSVDQLDWKTVTLPDRLDDAEGFYGL 63
Query: 67 EEIDEASYNLQIPKPEKGKPGK------------KTNTKKRKRSSAN-EEDPGDGDGDED 113
EEI+ + I +P G K K +T K + + + EE G GD ED
Sbjct: 64 EEIE----GVDILRPSGGGEIKFKASKSKIKGILKNSTDKSGQPAEDWEEWSGFGDDSED 119
Query: 114 GNGVQKEQEKNLKN----------------QKGKKKKKKKKGKKIKT---VEESVTVSNG 154
G+G E EK +N +K K K +G +IKT ++ V+ +
Sbjct: 120 GDGTTLEAEKKAENHGKVNDRRTKTNNSNKEKESNKLPKDRGPRIKTDNGIKTGVSFAAL 179
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDI 214
D+ EE++ + AW+ L L L S+ RL F PTPIQ ACIPA QG D+
Sbjct: 180 QDEVEEDV--------DVSAWDSLDLSAELQTSLGRLKFSSPTPIQSACIPAVL-QGHDV 230
Query: 215 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 274
IG A TGSGKTLAFG+PI++ L + + G+ E P ALI++PTREL
Sbjct: 231 IGKASTGSGKTLAFGIPIVEYFLG-KYRGGRAPTASEERESTKEPM----ALILSPTREL 285
Query: 275 ALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 331
A Q+ HL ++ A VR+ + GG+S KQ+RLL A ++++ TPGRLWE++
Sbjct: 286 AHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLL-ADADIIIATPGRLWEVVGSMT 344
Query: 332 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 391
L +L + F V+DEADR++ GHF+E++ I++ + + E E+++ +
Sbjct: 345 GFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGERSEREPEPEPDE 404
Query: 392 RKK---RQTLVFSATIALSADFRKKLKH---GSLKLKQS--VNGLNSIETLSERAGMR-A 442
KK RQTLVFSAT F K L+ G ++ + ++ S+E L + R
Sbjct: 405 EKKAEPRQTLVFSAT------FHKGLQQKLSGKIRYRNDDLLDKKESMEYLLRKLNFREE 458
Query: 443 NVAIVDLTNVSVLANKLEESFIE 465
+D+ +S +A L+E ++
Sbjct: 459 RPKFIDVNPISQMAQNLKEGLVQ 481
>gi|195123017|ref|XP_002006006.1| GI18782 [Drosophila mojavensis]
gi|193911074|gb|EDW09941.1| GI18782 [Drosophila mojavensis]
Length = 819
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 177/334 (52%), Gaps = 67/334 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+ + + +M+++ LG++ PT IQ +PAA H KDI+GAAETGSGKTLAFG+PI+
Sbjct: 213 WHGMGVPEPIMRALAELGYEAPTQIQAMTLPAAIHGKKDILGAAETGSGKTLAFGIPILS 272
Query: 235 RLLEEREK-----------------------------------------AGKMLEEKGEE 253
++E +++ +G EE E
Sbjct: 273 GIMELKQRNDDSGIRKAPKVKGAQGPVEEAPPTKDNHELTPSPEELDYVSGASDEESDNE 332
Query: 254 AEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARP 313
+ A + L A+++TPTRELA+QV +HL AK + V I GG+S KQER+L+ P
Sbjct: 333 HDPEAKQRPLYAVVLTPTRELAVQVKNHLVSAAKYTGINVAAIFGGLSVAKQERVLRQCP 392
Query: 314 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 373
E+VV TPGRLWEL + G HL ++ +SF +DE DRM+E GHF EL+S++ +L N
Sbjct: 393 EIVVATPGRLWELYAQGNSHLSKIENVSFLCIDETDRMVEKGHFEELRSLLKVL---NAD 449
Query: 374 NEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK-----LKQSVNGL 428
E ++K RQ VFSAT+ L D + ++ +L +KQ+V+
Sbjct: 450 EE---------------RKKLRQNFVFSATLTLVHDLPEHMQKRNLAKRPKFIKQTVD-- 492
Query: 429 NSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
IE+L E G+ + IVD+T+ A L ES
Sbjct: 493 QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 525
>gi|260829397|ref|XP_002609648.1| hypothetical protein BRAFLDRAFT_123567 [Branchiostoma floridae]
gi|229295010|gb|EEN65658.1| hypothetical protein BRAFLDRAFT_123567 [Branchiostoma floridae]
Length = 844
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 198/389 (50%), Gaps = 79/389 (20%)
Query: 125 LKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLL 184
LK Q+ +K+++KK+ +K+ ++ G + + V++ + + +W L + ++
Sbjct: 235 LKRQREEKRERKKQERKM-------PLAQG-HSCKPQSVAKKSVDADMTSWTPLFVPDVV 286
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREK-- 242
++ + GF +PTPIQ IP A KD++GAAETGSGKTLAFG+PI+ R+LE +E+
Sbjct: 287 LRGLADQGFTQPTPIQAQTIPQAIQAHKDVVGAAETGSGKTLAFGIPILHRILEWKERNL 346
Query: 243 ------AGKMLEEKGE-------------------------------EAEKYAPK----- 260
G EE E EA + AP
Sbjct: 347 QSEEGDLGNKNEEVPEDAADDDDDQEMESGGLGCVHVEDDITLPPELEALQEAPPLSAPT 406
Query: 261 -----GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 315
L AL++TPTRELA+QV +H+K AK NV+V +VGGM+ +KQ+R+L +PE+
Sbjct: 407 PQKVVSPLLALVLTPTRELAVQVANHIKAAAKYTNVKVAVLVGGMAPQKQKRVLDRQPEI 466
Query: 316 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 375
+V TPGRLWE++ HL +L+ L V+DEADRM+E GHF EL +++D + NG +
Sbjct: 467 IVATPGRLWEMVEQSHPHLSDLNQLQCLVIDEADRMVEKGHFAELGNLLDKI---NGED- 522
Query: 376 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 435
+ ++RQT VFSAT+ + ++ L L
Sbjct: 523 ---------------RNRRRQTFVFSATLTMVHSGPQRKIMKKKFKMDKDKKLGQ---LM 564
Query: 436 ERAGMRANVAIVDLTNVSVLANKLEESFI 464
+R G+R+ +VDL+ + L E+ I
Sbjct: 565 DRVGIRSKPLVVDLSRQQGTVDTLTEARI 593
>gi|348686576|gb|EGZ26391.1| hypothetical protein PHYSODRAFT_480097 [Phytophthora sojae]
Length = 793
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/261 (41%), Positives = 156/261 (59%), Gaps = 30/261 (11%)
Query: 114 GNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFD 173
G+ ++Q+K KKKK + GK K EE+V V D +
Sbjct: 88 GDSKTRQQKKQEDASNAPKKKKTRGGKAKK--EEAVEVVPLKD-------------VKLP 132
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
WN+ +LHPLLM+S+ GF PT IQ+ + A +D++GAA TGSGKTLAFGLPI+
Sbjct: 133 KWNKFKLHPLLMQSLQTCGFSAPTRIQERTLLPALVDNRDVVGAAPTGSGKTLAFGLPIL 192
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+LL ERE+ G + K ALI+TPTRELA+Q+ HL+++ + + V
Sbjct: 193 SQLLHEREQPGYTKDCK--------------ALILTPTRELAIQIQQHLEKMVRNREIGV 238
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH-TLSFFVLDEADRMI 352
V +VGGM+ +KQ+R+L RPE+V+GTPGRLW+++ +H+ +L TL F V+DEADRM+
Sbjct: 239 VTLVGGMAVQKQKRILSYRPEIVIGTPGRLWDIIEANHEHMKDLATTLRFLVVDEADRML 298
Query: 353 ENGHFRELQSIIDMLPMTNGS 373
+ G + EL+ I D+L N S
Sbjct: 299 QPGSYPELEKIFDVLRRKNKS 319
>gi|195429401|ref|XP_002062751.1| GK19535 [Drosophila willistoni]
gi|194158836|gb|EDW73737.1| GK19535 [Drosophila willistoni]
Length = 823
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 198/373 (53%), Gaps = 72/373 (19%)
Query: 141 KIKTVEESVTVSNGPDDAEEELVS---EAEISTE-FDAWNELRLHPLLMKSIYRLGFKEP 196
+ + ++S+ ++ +LVS E STE +W+ L + +++++ GF+EP
Sbjct: 182 RFSLIRPPASISSDEEEEAPQLVSASTEGFTSTEDLSSWHGLGVPQPILRALAEKGFREP 241
Query: 197 TPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGK-----MLEEKG 251
T IQ +PAA H KDI+GAAETGSGKTLAFG+P++ +++ +E+ K + KG
Sbjct: 242 TQIQAMTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMDLKERNAKHGIRKAPKVKG 301
Query: 252 EEAEKY--APKGH-----------------------------------LRALIITPTREL 274
E+++K P+ L AL++TPTREL
Sbjct: 302 EDSQKSEEPPRDDEHELTPPPEELDHVSGASDEDDSDLENHSASRERPLYALVLTPTREL 361
Query: 275 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 334
A+QV +HL AK +RV I GG++ KQER+L+ PE+VV TPGRLWEL G HL
Sbjct: 362 AVQVKNHLVAAAKYTGIRVATIFGGLAVAKQERVLRQGPEIVVATPGRLWELYCQGNHHL 421
Query: 335 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 394
+++ +SF V+DE DRM+E GHF EL+S++ +L NG + +++
Sbjct: 422 SKINDVSFLVIDETDRMVEKGHFEELRSLLKVL---NGDEQ---------------KKQL 463
Query: 395 RQTLVFSATIALSADFRKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDL 449
RQ VFSAT+ L D ++ ++ +KQ+V+ IE+L E G+ IVD+
Sbjct: 464 RQNFVFSATLTLVHDLPDHMQKRNVGKKPKFVKQTVD--QKIESLIEELGI-MQPKIVDI 520
Query: 450 TNVSVLANKLEES 462
T+ A L ES
Sbjct: 521 TSSQQTAQNLTES 533
>gi|384247532|gb|EIE21018.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 460
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 135/201 (67%), Gaps = 23/201 (11%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
VS A++S AW L L P ++ +I LGF EPTPIQ+ C+ A +D+IGAA+TGS
Sbjct: 35 VSAADVS----AWEGLGLGPGVLGAIGGLGFGEPTPIQRECLLPAIRDRRDVIGAAQTGS 90
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 282
GKTLAFGLPI+Q L+ R K G G LRALI+ PTRELA+QV++HL
Sbjct: 91 GKTLAFGLPILQ--LKGR-KGG----------------GLLRALILAPTRELAMQVSEHL 131
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 342
+ VAK + V V PIVGG+S KQ RLL RP +VV TPGRLWELM GE HL +L LSF
Sbjct: 132 QAVAKPVGVWVAPIVGGISPPKQARLLGRRPAIVVATPGRLWELMRLGEPHLADLTGLSF 191
Query: 343 FVLDEADRMIENGHFRELQSI 363
VLDEADRM++ GHF+EL I
Sbjct: 192 LVLDEADRMVQQGHFQELTCI 212
>gi|194753466|ref|XP_001959033.1| GF12675 [Drosophila ananassae]
gi|190620331|gb|EDV35855.1| GF12675 [Drosophila ananassae]
Length = 813
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 193/356 (54%), Gaps = 69/356 (19%)
Query: 155 PDDAEEELVSE-AEIS----TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
P+D+++E+V E IS + AWN L + +++++ GF PT IQ +PAA H
Sbjct: 190 PEDSDDEIVPELVSISNGNGVDVSAWNGLGVPAPILRALGEQGFSAPTQIQALTLPAAIH 249
Query: 210 QGKDIIGAAETGSGKTLAFGLPIMQRLLEERE---KAG--KMLEEKGEE-AEKYAPKGH- 262
KDI+GAAETGSGKTLAFG+P++ ++E ++ K+G K + KGE+ A + A H
Sbjct: 250 GKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNVKSGIRKAPKTKGEKPAAEPADDEHE 309
Query: 263 -------------------------------LRALIITPTRELALQVTDHLKEVAKGINV 291
L L++TPTRELA+QV +HL AK +
Sbjct: 310 LTPPPEELDHVSGASDEESDVEEHNQRMQRPLYGLVLTPTRELAVQVKNHLVAAAKYTGI 369
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+V I GG++ KQER+L+ PE+VV TPGRLWEL G +HL ++ SF V+DE DRM
Sbjct: 370 KVAAIFGGLAVAKQERVLRQCPEIVVATPGRLWELYCQGNQHLSKIEDASFLVIDETDRM 429
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 411
+E GHF EL+S++ +L S+E + +Q RQ V+SAT+ L D
Sbjct: 430 VEKGHFEELRSLLKVL----NSDEQKKQQ--------------RQNFVYSATLTLVHDLP 471
Query: 412 KKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
++ ++ +KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 472 DHMQKRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 524
>gi|303278168|ref|XP_003058377.1| helicase [Micromonas pusilla CCMP1545]
gi|226459537|gb|EEH56832.1| helicase [Micromonas pusilla CCMP1545]
Length = 1131
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 143/237 (60%), Gaps = 37/237 (15%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
+ AW + LH L++++ LGF PTPIQ C+ A D+IGAAETGSGKTLAFG
Sbjct: 329 ADVSAWLQFDLHSKLLRALQELGFTTPTPIQSECLNPAVKGRCDVIGAAETGSGKTLAFG 388
Query: 230 LPIMQRLLEEREKAGK-------------------------------MLEEKGEEAEKYA 258
LPI+ RLL +R++ + + +E+G
Sbjct: 389 LPILHRLLTQRDEEAEEGSDSESVDGDGDGGGDGDGDDADPDDPFANIEDERGRRGSAAG 448
Query: 259 PK-----GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARP 313
K LRALI+ PTRELA+QV + LK+VAK V VVP+VGGMS +KQERLLK RP
Sbjct: 449 MKLDRRRKALRALIVAPTRELAMQVCEMLKQVAKYSGVDVVPVVGGMSLQKQERLLKRRP 508
Query: 314 ELVVGTPGRLWELM-SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
E+VV TPGRLWELM G +H V+L LSF VLDEADRM+E GHF EL +IID LPM
Sbjct: 509 EIVVATPGRLWELMHQHGHEHFVDLGRLSFLVLDEADRMVERGHFAELANIIDTLPM 565
>gi|328872649|gb|EGG21016.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 909
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 141/221 (63%), Gaps = 18/221 (8%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
++ + EA + + W L PL++K + LG++ PT IQ IPA+ G DIIGAA
Sbjct: 236 QDRIAPEAADTLDMTVWESYNLDPLIIKGLRALGYERPTEIQSQVIPASIQSGNDIIGAA 295
Query: 219 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEA-----------EKYAPKGHLRALI 267
ETGSGKTLAFG+P++ +L K L +GE+ +K L AL+
Sbjct: 296 ETGSGKTLAFGIPMVNTIL-------KYLRAQGEDVTRSTLPQVGLLKKDNSHKKLLALV 348
Query: 268 ITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELM 327
+ PTRELA+QVT+HL+ VA ++R++ +VGG+S +KQ+R L ++PE+VV TPGRLWEL+
Sbjct: 349 LCPTRELAIQVTNHLRTVALETSLRIISVVGGLSQKKQDRELNSKPEIVVATPGRLWELI 408
Query: 328 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 368
G+K+L + L F +DEADRM+E G FRE+ SI++ LP
Sbjct: 409 DEGDKYLGDFTNLLCFGIDEADRMVEKGVFREIDSILERLP 449
>gi|452989521|gb|EME89276.1| hypothetical protein MYCFIDRAFT_185631 [Pseudocercospora fijiensis
CIRAD86]
Length = 723
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 225/460 (48%), Gaps = 56/460 (12%)
Query: 15 ETKPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASY 74
+ +PN++ R K+ +SL W + D + GF LEEID+
Sbjct: 12 DARPNKKPRIVKA------DSLPWKAVSLPDRMDDYE----------GFFGLEEIDDVDV 55
Query: 75 NLQIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKK 134
++ + K + ++ +A D D D D ++ + QK K+
Sbjct: 56 -------KRDEATGKVSLWSKEDQTALTADHASADSDADSWSGFEDDGPEIPVQKSAKQN 108
Query: 135 KKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFK 194
+ K K K + N P +E T+ AW L+L P M S+ +L F
Sbjct: 109 QPSKVKTAKKQDIHEGDDNPPSAFSVLAANEDAADTDVSAWMPLKLSPDTMASLSKLKFS 168
Query: 195 EPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLE---EREKAGKMLEEKG 251
PTPIQ+A IP G D+IG A TGSGKTLAFG+PI++R LE EREK
Sbjct: 169 NPTPIQEAAIPKI-FAGHDVIGKASTGSGKTLAFGIPILERFLEKISEREKL-------- 219
Query: 252 EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR---VVPIVGGMSTEKQERL 308
E+ P ALI++PTRELA Q+ HL + G++ + + + GG+S +KQ+RL
Sbjct: 220 ---EQSTPI----ALILSPTRELAHQLNSHLAALFDGLDAKKPTIATLTGGLSLQKQQRL 272
Query: 309 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 368
L+ ++V+GTPGRLWE++ G+ L + F V+DEADR++ GHF+E++ I++ L
Sbjct: 273 LR-DADVVIGTPGRLWEVIGSGKGVAAALKQIEFLVVDEADRLLSEGHFKEVEEILNAL- 330
Query: 369 MTNGSNEGQSEQTQTCVTVSSLQR--KKRQTLVFSATIALSADFRKKLKHGSLKLKQSVN 426
E Q E+ Q S + K+RQTLVFSAT +KKL + ++
Sbjct: 331 ----DREDQDEEHQEVPDSSHAVKSPKERQTLVFSAT--FDRGLQKKLVGKISSKRDLLH 384
Query: 427 GLNSIETLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 465
++E L + R ++ +D+ V+ LA L+E IE
Sbjct: 385 NKEAMEYLMSKLNFREDIPQFIDVNPVNQLATGLKEGLIE 424
>gi|405124025|gb|AFR98787.1| ATP-dependent RNA helicase MAK5 [Cryptococcus neoformans var.
grubii H99]
Length = 771
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 167/310 (53%), Gaps = 36/310 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+ + LHP L +S F PT IQ IPA G+D++G AETGSGKTLA+ LPI+
Sbjct: 173 WSSIPLHPALKRSFLASSFTAPTAIQSRAIPAGV-TGRDVVGVAETGSGKTLAYSLPILH 231
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----- 289
LL +R++ K K L ALI+ PTRELALQV DHL + K
Sbjct: 232 YLLAQRKR-------------KAGIKRPLSALILCPTRELALQVMDHLNALLKHALATSD 278
Query: 290 --------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 341
V V +VGG+S +KQ+R+L +++V TPGRLW+L+ ++ + TL
Sbjct: 279 GEKPQGPPRVSVGSVVGGLSAQKQKRILDRGCDVIVATPGRLWDLIKADDELATNVRTLR 338
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL-----QRKKRQ 396
F V+DEADRMIENGHF EL+SI+ L + + +G + +++L R Q
Sbjct: 339 FLVIDEADRMIENGHFAELESIV-KLTQRSTAQQGPDDNDPVFEAMATLFEESAARDDMQ 397
Query: 397 TLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVL 455
T VFSAT LS D +K LK S K +++E L E+ R N ++DL+ +
Sbjct: 398 TFVFSAT--LSKDLQKNLKRRSTSWKGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEGGV 455
Query: 456 ANKLEESFIE 465
+ L ES IE
Sbjct: 456 VSSLRESMIE 465
>gi|449303441|gb|EMC99448.1| hypothetical protein BAUCODRAFT_29794 [Baudoinia compniacensis UAMH
10762]
Length = 718
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 179/348 (51%), Gaps = 36/348 (10%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQ 121
GF LEE+D+ + P GK N RK S + GD DED +
Sbjct: 32 GFFGLEEVDDVEV---VRDPSSGKLSYVPN-DVRKSSVQDARSNGD---DEDAWEGWDDT 84
Query: 122 EKNLKNQKGKKKKKKKKGKKIKTVEES-VTVSNGPDDAEEELVSEAEISTEFDAWNELRL 180
+L N + K K+ K E S + PD E ++ + AW L+L
Sbjct: 85 PHHLGNGRKTASKATPSAKRFKPNETSTAALQVLPDVLENSMI-------DVSAWRPLKL 137
Query: 181 HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEER 240
P + S+ RLGF PTPIQ+A IP A G D++G A TGSGKTLAFG+PI++R LE R
Sbjct: 138 SPDTLASLARLGFSNPTPIQRAAIPEAL-GGHDVVGKASTGSGKTLAFGIPILERFLELR 196
Query: 241 EKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV---RVVPIV 297
K + KG H AL+++PTRELA Q+ HL+ + + +
Sbjct: 197 SKRNNV-PSKGR---------HPLALLLSPTRELAHQLDKHLRALCSSDYFDGPSIATVT 246
Query: 298 GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 357
GG+S KQ+RLLK ++V+GTPGRLWE+MS G+ L L + F ++DEADR++ GH+
Sbjct: 247 GGLSILKQQRLLKT-ADIVIGTPGRLWEVMSSGQGTLDALSRIQFLIVDEADRLLSEGHY 305
Query: 358 RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS-LQRKKRQTLVFSATI 404
+E++ I+D L SE + V + R RQTLVFSAT
Sbjct: 306 KEVEEILDAL-----YRRHDSEDDEAAVQADAGDSRPARQTLVFSATF 348
>gi|410898437|ref|XP_003962704.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Takifugu
rubripes]
Length = 739
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 176/336 (52%), Gaps = 64/336 (19%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
T+ AW +L + ++K++ LGF PTPIQ +P+A KDI+GAAETGSGKTLAFG
Sbjct: 154 TDVSAWKDLFVPAPVLKALSSLGFGSPTPIQALTLPSAIRDHKDILGAAETGSGKTLAFG 213
Query: 230 LPIMQRLLEEREKAGKMLEEKGEE--------------AEKYAPKGH------------- 262
+P++ +LE ++ + +++E+ E +E Y+ +
Sbjct: 214 IPMIHTILEWKKNSAELVEDNIEATIPMKSLYLPEPTASENYSVEEEVIKDAETESEDMT 273
Query: 263 -------------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL 309
L L++TPTRELA+QV H+ V+K +++ +VGG+S EKQ R+L
Sbjct: 274 KEEENAAGSFSQPLLGLVLTPTRELAVQVKHHIDAVSKFTDIKTAIVVGGLSQEKQRRML 333
Query: 310 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
K RPE+++ TPGRLW+L+ HL L + V+DEADRM+E GHF EL+++++ML
Sbjct: 334 KLRPEIIIATPGRLWDLIKEKHPHLQNLRQVRCLVIDEADRMVERGHFAELENLLEMLKT 393
Query: 370 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLN 429
+ + RQ VFSAT+ +L K+S++ +
Sbjct: 394 AHFN-------------------PLRQMFVFSATLTTKHSLPTRLLQ-----KRSLDQRS 429
Query: 430 SIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
+E L ++ G++A IVDLT L E+ I+
Sbjct: 430 RLEILIDKVGIKAKPKIVDLTRKEATVETLTETCIQ 465
>gi|392573357|gb|EIW66497.1| hypothetical protein TREMEDRAFT_65359 [Tremella mesenterica DSM
1558]
Length = 744
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 211/433 (48%), Gaps = 62/433 (14%)
Query: 61 GGFLSLEEIDEASYNLQ-----------IPKPEKGKPGKKTNTKKRKRSSANEEDPGDGD 109
GG + LEE+D+ + IP P GK TK KR + DG+
Sbjct: 45 GGMMMLEELDDVAVEWVQDEGGAKKARFIPAPNSKGKGKAKETKNGKRIAEASNQGIDGE 104
Query: 110 GDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEIS 169
DED + ++QE ++ VEE D E+ L EA
Sbjct: 105 -DED-ETINEDQEITGDDEI----------PSFSRVEEE---DMNEVDQEDHLGDEAFDD 149
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
T W+ + LHP+L +S+ +LGF +PT IQ +P G+D++G AETGSGKTLA+
Sbjct: 150 TLLPQWSSIPLHPILKRSLSKLGFTKPTDIQARALPVCL-AGRDVVGVAETGSGKTLAYA 208
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 289
LPI+ LL K L +LI+ PTRELALQV DHL V +
Sbjct: 209 LPILSYLLRN--------------PRATTSKRTLSSLILCPTRELALQVVDHLNTVIRQT 254
Query: 290 --------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 341
+ V ++GG+S +KQ+R+L +++V TPGRLW+L+ + E+ +
Sbjct: 255 FPEKKGPPRISVGSVIGGLSAQKQQRILDRGCDVLVATPGRLWDLIKANDDLAAEIKRIR 314
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLP-MTNGSNEGQSEQTQTCVTVSS-----LQRKKR 395
F V+DEADRMIENGHF EL+SI+ + + S G +E+ +S R
Sbjct: 315 FLVIDEADRMIENGHFAELESIVRLTERQSRLSGRGAAEEEDPVFAATSSLDDVSARSDM 374
Query: 396 QTLVFSATIA--LSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNV 452
QT +FSAT++ L +F++K K GS K + + L E L ER R N ++DL+
Sbjct: 375 QTFIFSATLSKDLQQNFKRK-KRGSQKGDKKSSAL---EDLVERLDFRDKNPEVIDLSPE 430
Query: 453 SVLANKLEESFIE 465
+ L+ES IE
Sbjct: 431 GGVVAMLKESMIE 443
>gi|195382239|ref|XP_002049838.1| GJ21808 [Drosophila virilis]
gi|194144635|gb|EDW61031.1| GJ21808 [Drosophila virilis]
Length = 819
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 185/358 (51%), Gaps = 68/358 (18%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
S+G ++ + + S + + WN + + +M+++ G++ PT IQ +PAA H
Sbjct: 189 SSGDEEVPQLVPSTPQDEKDMTKWNGMGVPAPIMRALAEQGYEAPTQIQAMTLPAAIHGK 248
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEEREK----------------------------- 242
KDI+GAAETGSGKTLAFG+PI+ ++E +++
Sbjct: 249 KDILGAAETGSGKTLAFGIPILSGIMELKQRNDGSCIRKAPKVKGTQQVEEPPQSKDNHN 308
Query: 243 -------------AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 289
+G EE E L A+++TPTRELA+QV +HL AK
Sbjct: 309 HELTPPPEELDYVSGASDEESDAEEHNQGMGRPLYAVVLTPTRELAVQVKNHLVAAAKYT 368
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
+RV I GG+S KQER+L+ PE+VV TPGRLWEL + G +HL ++ ++F +DE D
Sbjct: 369 GIRVAAIFGGLSVAKQERVLRQCPEIVVATPGRLWELYAQGNQHLNKIENVNFLCIDETD 428
Query: 350 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
RM+E GHF EL+S++ +L N + ++K RQ VFSAT+ L D
Sbjct: 429 RMVEKGHFEELRSLLKVL---NADED---------------RKKLRQNFVFSATLTLVHD 470
Query: 410 FRKKLKHGSLK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
+ ++ +L +KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 471 LPEHMQKRNLAKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 525
>gi|301103398|ref|XP_002900785.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262101540|gb|EEY59592.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 763
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 141/217 (64%), Gaps = 16/217 (7%)
Query: 159 EEELVSEAEI-STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
E+ELV + WN+ +LHPLLM+S+ GF PT IQ+ + A +D++GA
Sbjct: 97 EQELVEIVALKDVNLPKWNKFKLHPLLMQSLQTCGFSAPTRIQERTLLPALVDNRDVVGA 156
Query: 218 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQ 277
A TGSGKTLAFGLPI+ +LL ERE+ G + + K ALI+TPTRELA+Q
Sbjct: 157 APTGSGKTLAFGLPILSQLLHEREQPGYIKDCK--------------ALILTPTRELAIQ 202
Query: 278 VTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 337
+ HL+++ + + VV +VGGM+ +KQ+R+L RPE+V+GTPGRLW+++ +H+ +L
Sbjct: 203 IQQHLEKMVRNREIGVVTLVGGMAVQKQKRILTYRPEIVIGTPGRLWDIIETNHEHMQDL 262
Query: 338 HT-LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 373
T L F V+DEADRM++ G + EL+ I ++L N S
Sbjct: 263 ATSLRFLVVDEADRMLQPGSYSELEKIFEVLRRKNKS 299
>gi|134117550|ref|XP_772546.1| hypothetical protein CNBL0260 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818273|sp|P0CQ91.1|MAK5_CRYNB RecName: Full=ATP-dependent RNA helicase MAK5
gi|50255161|gb|EAL17899.1| hypothetical protein CNBL0260 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 772
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 166/310 (53%), Gaps = 36/310 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+ + LHP L +S F PT IQ IPA G+D++G AETGSGKTLA+ LPI+
Sbjct: 174 WSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGI-TGRDVVGVAETGSGKTLAYSLPILH 232
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----- 289
LL G+ K K L AL++ PTRELALQV DHL + K
Sbjct: 233 YLL-------------GQRKSKAGIKRPLSALVLCPTRELALQVMDHLNALLKHALATPD 279
Query: 290 --------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 341
V V +VGG+S +KQ+R+L+ +++V TPGRLW+L+ ++ + TL
Sbjct: 280 GEKPQGPPRVSVGSVVGGLSAQKQKRILERGCDVIVATPGRLWDLIKADDELATSVRTLR 339
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE-----QTQTCVTVSSLQRKKRQ 396
F V+DEADRMIENGHF EL+SI+ L + + +G + Q + S R+ Q
Sbjct: 340 FLVIDEADRMIENGHFAELESIV-KLTQRSTAQQGPDDDDPVFQAMATLFEESTAREDMQ 398
Query: 397 TLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVL 455
T VFSAT LS D +K LK S K +++E L E+ R N ++DL+ +
Sbjct: 399 TFVFSAT--LSKDLQKNLKRRSRSWKGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEGGV 456
Query: 456 ANKLEESFIE 465
+ L ES IE
Sbjct: 457 VSSLRESMIE 466
>gi|58270130|ref|XP_572221.1| ATP dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|338818274|sp|P0CQ90.1|MAK5_CRYNJ RecName: Full=ATP-dependent RNA helicase MAK5
gi|57228479|gb|AAW44914.1| ATP dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 772
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 166/310 (53%), Gaps = 36/310 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+ + LHP L +S F PT IQ IPA G+D++G AETGSGKTLA+ LPI+
Sbjct: 174 WSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGI-TGRDVVGVAETGSGKTLAYSLPILH 232
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----- 289
LL G+ K K L AL++ PTRELALQV DHL + K
Sbjct: 233 YLL-------------GQRKSKAGIKRPLSALVLCPTRELALQVMDHLNALLKHALATPD 279
Query: 290 --------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 341
V V +VGG+S +KQ+R+L+ +++V TPGRLW+L+ ++ + TL
Sbjct: 280 GEKPQGPPRVSVGSVVGGLSAQKQKRILERGCDVIVATPGRLWDLIKADDELATSVRTLR 339
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE-----QTQTCVTVSSLQRKKRQ 396
F V+DEADRMIENGHF EL+SI+ L + + +G + Q + S R+ Q
Sbjct: 340 FLVIDEADRMIENGHFAELESIV-KLTQRSTAQQGPDDDDPVFQAMATLFEESTAREDMQ 398
Query: 397 TLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVL 455
T VFSAT LS D +K LK S K +++E L E+ R N ++DL+ +
Sbjct: 399 TFVFSAT--LSKDLQKNLKRRSRSWKGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEGGV 456
Query: 456 ANKLEESFIE 465
+ L ES IE
Sbjct: 457 VSSLRESMIE 466
>gi|195028797|ref|XP_001987262.1| GH20064 [Drosophila grimshawi]
gi|193903262|gb|EDW02129.1| GH20064 [Drosophila grimshawi]
Length = 806
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 181/349 (51%), Gaps = 69/349 (19%)
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAET 220
ELVS + W + + +M+++ G++ PT IQ +PAA H KDI+GAAET
Sbjct: 186 ELVS-CSAKVDMSKWQGMGIPTSIMRALAEQGYEAPTQIQAMTLPAAIHGKKDILGAAET 244
Query: 221 GSGKTLAFGLPIMQRLLEE---------REKAGKM------------------------- 246
GSGKTLAFG+PI+ ++E R +A K
Sbjct: 245 GSGKTLAFGIPILSGIMELKQRNDGSGIRTRAPKHKVEATVEAEVPTSKENHELTPPPEE 304
Query: 247 ------LEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 298
E+ +AE Y+ G L AL++TPTRELA+QV +HL AK +RV I G
Sbjct: 305 LDYVSGASEEESDAEDYSSSGRRPLYALVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFG 364
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
G+S KQER+L+ PE+VV TPGRLWEL + G KHL ++ ++F +DE DRM+E GHF
Sbjct: 365 GLSVAKQERVLRQCPEIVVATPGRLWELYAQGNKHLNKIEHVNFLCIDETDRMVEKGHFE 424
Query: 359 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 418
EL+ ++ +L N E +++ RQ VFSAT+ L D + ++ +
Sbjct: 425 ELRMLLKVL---NAHEE---------------RKQLRQNFVFSATLTLIHDLPEHMQKRN 466
Query: 419 LK-----LKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
L KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 467 LAKRPKFTKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 512
>gi|326479695|gb|EGE03705.1| ATP-dependent RNA helicase MAK5 [Trichophyton equinum CBS 127.97]
Length = 742
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 179/311 (57%), Gaps = 30/311 (9%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
++ E + AW+ L L P L S+ RL F +PTPIQKA IP G+D+IG A TGSG
Sbjct: 158 TDEEADVDVSAWDSLDLRPELQTSLSRLKFAQPTPIQKATIPEIL-SGRDVIGKAATGSG 216
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
KTLAFGLPI+Q LL+ +EK L + +++ ALI++PTRELA Q+ HLK
Sbjct: 217 KTLAFGLPILQYLLKRQEKRPSALSKSSDKSPI--------ALILSPTRELAHQLVKHLK 268
Query: 284 EV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
EV A ++ + + GG+S KQ+R L A ++VVGTPGRLW+++S K L +L ++
Sbjct: 269 EVTSSAPNVDAYIASVTGGLSVYKQQRQL-AEADIVVGTPGRLWDMVSSTPKILTKLRSI 327
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 400
F V+DEADR++ GHF+E+ ++ L T S+E E ++ +S RQTLVF
Sbjct: 328 KFLVVDEADRLLSEGHFKEVGELLSALDKTRTSDEDVDEASEEEEEPAS-----RQTLVF 382
Query: 401 SATIALSADFRKKLKHGSLKLKQSV-NGL----NSIETLSERAGMR-ANVAIVDLTNVSV 454
SAT F+K L+ K S N L S+E L ++ + +D+ VS
Sbjct: 383 SAT------FQKGLQQKLAKRDHSFHNNLLDKKESMEYLLKKLRFKDEKPRFIDVNPVSQ 436
Query: 455 LANKLEESFIE 465
+A+ L+E IE
Sbjct: 437 MADNLKEGIIE 447
>gi|326475209|gb|EGD99218.1| ATP-dependent RNA helicase MAK5 [Trichophyton tonsurans CBS 112818]
Length = 742
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 179/311 (57%), Gaps = 30/311 (9%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
++ E + AW+ L L P L S+ RL F +PTPIQKA IP G+D+IG A TGSG
Sbjct: 158 TDEEADVDVSAWDSLDLRPELQTSLSRLKFAQPTPIQKATIPEIL-SGRDVIGKAATGSG 216
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
KTLAFGLPI+Q LL+ +EK L + +++ ALI++PTRELA Q+ HLK
Sbjct: 217 KTLAFGLPILQYLLKRQEKRPSALSKSSDKSPI--------ALILSPTRELAHQLVKHLK 268
Query: 284 EV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
EV A ++ + + GG+S KQ+R L A ++VVGTPGRLW+++S K L +L ++
Sbjct: 269 EVTSSAPNVDAYIASVTGGLSVYKQQRQL-AEADIVVGTPGRLWDMVSSTPKILTKLRSI 327
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 400
F V+DEADR++ GHF+E+ ++ L T S+E E ++ +S RQTLVF
Sbjct: 328 KFLVVDEADRLLSEGHFKEVGELLSALDKTRTSDEDVDEASEEEEEPAS-----RQTLVF 382
Query: 401 SATIALSADFRKKLKHGSLKLKQSV-NGL----NSIETLSERAGMR-ANVAIVDLTNVSV 454
SAT F+K L+ K S N L S+E L ++ + +D+ VS
Sbjct: 383 SAT------FQKGLQQKLAKRDHSFHNNLLDKKESMEYLLKKLRFKDEKPRFIDVNPVSQ 436
Query: 455 LANKLEESFIE 465
+A+ L+E IE
Sbjct: 437 MADNLKEGIIE 447
>gi|327302418|ref|XP_003235901.1| ATP-dependent RNA helicase MAK5 [Trichophyton rubrum CBS 118892]
gi|326461243|gb|EGD86696.1| ATP-dependent RNA helicase MAK5 [Trichophyton rubrum CBS 118892]
Length = 746
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 222/428 (51%), Gaps = 57/428 (13%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKTNTKKRKRSSANEEDPGDGDGDE-DGNGVQKE 120
GF LEEI+ + I +P G+ K K ++ NEE DG+E G G + E
Sbjct: 57 GFYGLEEIE----GVDIIRPADGEQLKFLAAKSSIKTGDNEELDDYDDGEEWLGFGDEVE 112
Query: 121 QEKNLKNQKGKKK--------------KKKKKGKKIKTVEESVTVSNGPDDAEEELVSEA 166
Q+ K K +++K K++++ S+ ++A EE +
Sbjct: 113 QQPEPKQLSFKSTENKKKKDKKEREKPRQEKDNAKVQSIPFSIL-----NEANEE--PDV 165
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
++S AW+ L L P L S+ RL F +PTPIQKA IP G+D+IG A TGSGKTL
Sbjct: 166 DVS----AWDSLDLRPELQTSLSRLKFAQPTPIQKATIPEIL-GGRDVIGKAATGSGKTL 220
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV- 285
AFGLPI+Q LL +E+ L + ++K ALI++PTRELA Q+ HLKEV
Sbjct: 221 AFGLPILQYLLNRQEQHPSTLLALPKSSDKTP-----IALILSPTRELAHQLVKHLKEVT 275
Query: 286 --AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 343
A ++ + + GG+S KQ+R L A +++VGTPGRLW+++S + L +L ++ F
Sbjct: 276 SSAPNVDAYIASVTGGLSVHKQQRQL-AEADIIVGTPGRLWDMVSSTPQILTKLRSIKFL 334
Query: 344 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 403
V+DEADR++ GHF+E+ ++ L T S++ E + + RQTLVFSAT
Sbjct: 335 VVDEADRLLSEGHFKEVGELLSALDRTRTSDQDVDETPEEEEEPAG-----RQTLVFSAT 389
Query: 404 IALSADFRKKLKHGSLKLKQSV--NGLNSIET----LSERAGMRANVAIVDLTNVSVLAN 457
F+K L+ K S N L+ E+ L E +D+ VS +A+
Sbjct: 390 ------FQKGLQQKLAKRDHSFHDNLLDKKESMEYLLKELRFKDEKPRFIDVNPVSQMAD 443
Query: 458 KLEESFIE 465
L+E IE
Sbjct: 444 NLKEGIIE 451
>gi|405950996|gb|EKC18946.1| ATP-dependent RNA helicase DDX24 [Crassostrea gigas]
Length = 1159
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 191/337 (56%), Gaps = 45/337 (13%)
Query: 126 KNQKGKKKKKKKKG--------KKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNE 177
K++K +K+K+K K++K +EES + PDD + I+ + AW +
Sbjct: 176 KSEKKTARKRKEKFVDSYSSERKRMKVMEESEEETKSPDDGK--------INEKMAAWKD 227
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPI----M 233
L + +++++ + F PTPIQ +P+A KD++GAAETGSGKTLAFG+P+
Sbjct: 228 LFVPKEVLQALCKSKFFAPTPIQAMALPSAIRDRKDVVGAAETGSGKTLAFGIPVGDLGC 287
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+++++ + + L + G +K + K L ALI+ PTRELA+QV DHL+ A ++ +
Sbjct: 288 VKVIDDADFSELGLPDAGPLLKK-SNKSPL-ALILQPTRELAVQVKDHLQVAAAYTDITI 345
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
PI+GGMS EKQ+R+LK P+++V TPGRLWELMS + +L + + V+DEADRMIE
Sbjct: 346 APILGGMSAEKQKRILKKCPDILVATPGRLWELMS-QDPYLSRIDEVDTLVIDEADRMIE 404
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 413
GHF EL I++ + NE ++ RQT VFSAT+ L ++
Sbjct: 405 KGHFEELTQILNYI----NRNEK--------------KKNTRQTFVFSATLTLVHSGPQR 446
Query: 414 LKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
S + K ++ +ETL R MR ++DLT
Sbjct: 447 ----SSRKKMALTEEKKLETLMSRIQMREKPKVIDLT 479
>gi|328771868|gb|EGF81907.1| hypothetical protein BATDEDRAFT_10092 [Batrachochytrium
dendrobatidis JAM81]
Length = 529
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 151/259 (58%), Gaps = 32/259 (12%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
++ +++ P ++E +V ++ ++ W E L+ L++++++LGF PT IQ +
Sbjct: 123 HDTFHITDAPV-SDEPIVDHYKVPSD-SKWLEFGLNLQLVQTLHKLGFSCPTDIQAKSLE 180
Query: 206 AAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 265
+ KDIIGAAETGSGKTLAFGLPI+ L + +K P
Sbjct: 181 NTLVRHKDIIGAAETGSGKTLAFGLPILHHLAIQLQKN---------------PNTACIG 225
Query: 266 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 325
LIITPTRELA+QV+DHLK I ++ PIVGGMS +KQ RL+ +P ++VGTPGRLWE
Sbjct: 226 LIITPTRELAIQVSDHLKRAGAAITHKITPIVGGMSLQKQRRLIATKPHIIVGTPGRLWE 285
Query: 326 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 385
L+ + L L ++ V+DEADRM+E GHF++L SI+ + + N N Q
Sbjct: 286 LIQEDPELLDMLKHTTYLVIDEADRMLEAGHFKDLDSILGCISVCNTDNASQI------- 338
Query: 386 TVSSLQRKKRQTLVFSATI 404
KR+T+VFSAT+
Sbjct: 339 --------KRRTMVFSATM 349
>gi|324502072|gb|ADY40913.1| ATP-dependent RNA helicase DDX24 [Ascaris suum]
Length = 790
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 172/330 (52%), Gaps = 50/330 (15%)
Query: 133 KKKKKKGKKIKTVEESVT----------VSNGPDDAEEELVSEAEISTEFDAWNELRLHP 182
K K+KK K+ +++ ES++ V G + SE ++S AW L
Sbjct: 178 KPKQKKRKREQSLRESISEDIVENEEERVRGGCEPTSTSHTSEVDLS----AWMPFCLPD 233
Query: 183 LLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREK 242
+MK++ LGF +PT IQK +P+A D++GAAETGSGKTLA+ +P++ RLL+ +
Sbjct: 234 EIMKALADLGFTKPTEIQKLVLPSAVRDKLDVLGAAETGSGKTLAYAIPLIVRLLDAQNS 293
Query: 243 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMST 302
E + + HLRALI+ PTREL +Q+ H+ + K N + IVGG+S
Sbjct: 294 M-----------EDWTLQRHLRALILAPTRELVVQIRKHIDALIKYTNFKATSIVGGLSQ 342
Query: 303 EKQERLLKARPELVVGTPGRLWELMSGGEK--HLVELHTLSFFVLDEADRMIENGHFREL 360
+KQERLLK RPE+VV TPGR W L + +L L V+DE DRM+E GHF EL
Sbjct: 343 QKQERLLKYRPEIVVATPGRFWSLAGNAPQGSYLANWQKLLCLVVDETDRMVEKGHFEEL 402
Query: 361 QSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK 420
+ I++ + S KRQTLVFSAT+ ++L +++
Sbjct: 403 EFILE--------------------AIKSDGNVKRQTLVFSATLTFVHPAPRRL---NIQ 439
Query: 421 LKQSVNGLNSIETLSERAGMRANVAIVDLT 450
Q + I+ L E G+R + D+T
Sbjct: 440 QTQQMTTKEKIDRLIEIVGLRKERKVFDIT 469
>gi|158289761|ref|XP_311419.4| AGAP010702-PA [Anopheles gambiae str. PEST]
gi|157018482|gb|EAA07044.4| AGAP010702-PA [Anopheles gambiae str. PEST]
Length = 739
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 203/402 (50%), Gaps = 73/402 (18%)
Query: 97 RSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPD 156
+S N+ +PG+G + QKE E + K ++ + K + VS+ P
Sbjct: 146 KSKKNDREPGEG---AEAATTQKEPEPPKSSSSTKLQQNQSKQNN------ATKVSDKP- 195
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIG 216
V E + ++ AW +L + +++++ GFK PT IQ +P A + +D++G
Sbjct: 196 ------VPEPYSTADYTAWVQLGVSEPIVRALADKGFKVPTEIQNKSLPVAIYGRRDLLG 249
Query: 217 AAETGSGKTLAFGLPIMQRLLE---------------EREKAGKMLEEKGEEAEKYAPKG 261
AAETGSGKTLAFG+P+++ ++ E + +E E+A+ +A +G
Sbjct: 250 AAETGSGKTLAFGIPMLEGIMHLKKGKKPVADDSSEHEMTPPSEDMEVTEEDAKVFAEEG 309
Query: 262 H-------------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERL 308
L LI+TPTRELA+Q+ DHLK VAK ++ + + GG++T KQER+
Sbjct: 310 RKLGNSSAAPEDKPLYGLILTPTRELAVQINDHLKAVAKYTDINIATVFGGLATVKQERM 369
Query: 309 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 368
L+ PE+V+ TPGRLWEL+ HL ++ + + V+DE DRM+E GHF EL+ ++L
Sbjct: 370 LRKCPEIVIATPGRLWELVKSENHHLSKVTDIRYLVIDETDRMLEKGHFEELK---ELLA 426
Query: 369 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG------SLKLK 422
+ N + E +K R+ +FSAT+ + + +K +LKL
Sbjct: 427 LINANEEA---------------KKLRRNYIFSATLTMDHEMPTHIKRHPKKSKKALKLT 471
Query: 423 QSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
N IET+ GM + IVDLT A L ES I
Sbjct: 472 PGQRMANLIETI----GM-TDPKIVDLTQDHGTARTLTESRI 508
>gi|321261600|ref|XP_003195519.1| ATP dependent RNA helicase [Cryptococcus gattii WM276]
gi|317461993|gb|ADV23732.1| ATP dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 772
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 165/310 (53%), Gaps = 36/310 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+ + LHP L +S F PT IQ IPA G+D++G AETGSGKTLA+ LPI+
Sbjct: 174 WSSISLHPALKRSFLASSFTAPTAIQSRAIPAGI-TGRDVVGVAETGSGKTLAYALPILH 232
Query: 235 RLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI---- 289
LL +R+ +AG K L AL++ PTRELALQV DHL + K
Sbjct: 233 YLLGQRKLRAGI--------------KRPLSALVLCPTRELALQVMDHLNALLKHALATS 278
Query: 290 ---------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
+ V +VGG+S +KQ+R+L ++++ TPGRLW+L+ ++ + TL
Sbjct: 279 DGEKPQGPPRISVGSVVGGLSAQKQKRILDRGCDVIIATPGRLWDLIKADDELATSVRTL 338
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTN----GSNEGQSEQTQTCVTVSSLQRKKRQ 396
F V+DEADRMIENGHF EL+SI+ + + ++ Q + S+ R Q
Sbjct: 339 RFLVIDEADRMIENGHFAELESIVKLTQRSTVKQGPDDDDPVFQAMATIFEESVARDDMQ 398
Query: 397 TLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVL 455
T VFSAT LS D + LK S K +++E L E+ R N ++DL+ +
Sbjct: 399 TFVFSAT--LSKDLQTNLKRRSRSWKGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEGGV 456
Query: 456 ANKLEESFIE 465
+ L ES IE
Sbjct: 457 VSSLRESMIE 466
>gi|395503712|ref|XP_003756207.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Sarcophilus harrisii]
Length = 800
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 172/338 (50%), Gaps = 66/338 (19%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 203 DVSAWKDLFVPEPVLRALSSLGFSAPTPIQALALAPAIRDNLDILGAAETGSGKTLAFAI 262
Query: 231 PIMQRLL---EEREKAGKMLEEKGE----------------------------------- 252
P++ +L EE+E+AG E+ GE
Sbjct: 263 PMIHSVLRWQEEQEQAGGHSED-GESLGDANGSSDDGNEEKDGDPSHSPSDEKESADIEL 321
Query: 253 EAEKYAPKGH------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQE 306
E E+ P GH L L++TPTRELA+QV H+ VAK ++ +VGGM+ +KQ+
Sbjct: 322 ELEEEKPTGHSNRSSPLLGLVLTPTRELAVQVKHHIDAVAKFTGIKTALLVGGMAPQKQQ 381
Query: 307 RLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 366
R+L RPE+V+ TPGRLWEL+ +HL L L V+DEADRM+E GHF EL +++M
Sbjct: 382 RMLTRRPEIVIATPGRLWELIKEQHQHLSNLRQLRCLVIDEADRMVERGHFTELTQLLEM 441
Query: 367 LPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVN 426
L N+ Q +RQT VFSAT+ L ++ K + ++
Sbjct: 442 L------NDSQY-------------NPQRQTFVFSATLTLVHQAPARVFQK--KNAKKID 480
Query: 427 GLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
L ++ L ++ GMR ++DLT L E+ I
Sbjct: 481 KLGKLDMLMQKIGMRGKPKVIDLTRKEATVETLTETKI 518
>gi|328778593|ref|XP_001122313.2| PREDICTED: ATP-dependent RNA helicase DDX24-like [Apis mellifera]
Length = 747
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 176/327 (53%), Gaps = 56/327 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L + ++K++ F +PTPIQ +P A +DI+GAAETGSGKTLAFG+PI+
Sbjct: 140 WQILGVSTPIIKALKDQQFYQPTPIQALTLPPAILGHRDILGAAETGSGKTLAFGIPIIN 199
Query: 235 RLLEEREKA------------GKMLEEKG---------------------EEAEKYAPKG 261
+LE + K K++E KG E+ +K +
Sbjct: 200 GILELKNKQSDQINIKSEKERNKIIENKGWICSENKTIEIDNSSSESDYEEDIDKNYMEK 259
Query: 262 HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPG 321
L ALI+TPTRELA+Q+ DHL + AK +++++ ++GGM+ KQER+L PE+V+ TPG
Sbjct: 260 PLYALILTPTRELAIQIKDHLTKAAKYVDIKIAVVLGGMAAVKQERILSKGPEIVIATPG 319
Query: 322 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT 381
RLWEL+ G HL ++ ++ + V+DE DRM+E GHF+ELQ +++ + +NE
Sbjct: 320 RLWELIQYGNPHLCKVDSVKYLVIDETDRMLEKGHFQELQQLLEKI----NTNEK----- 370
Query: 382 QTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK----HGSLKLKQSVNGLNSIETLSER 437
+ ++RQT VFSAT+ + D + L+ + + +E + E
Sbjct: 371 ---------RLRERQTFVFSATLTMVHDIPEYLQKKKRKHIKSKIKKLTPSQKLEKIMEL 421
Query: 438 AGMRANVAIVDLTNVSVLANKLEESFI 464
G++ N I+D+T S + L E I
Sbjct: 422 VGIK-NPKIIDVTKESGITANLTECRI 447
>gi|320039765|gb|EFW21699.1| ATP-dependent RNA helicase MAK5 [Coccidioides posadasii str.
Silveira]
Length = 783
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 242/503 (48%), Gaps = 82/503 (16%)
Query: 20 RRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GFLSL 66
+R K A+ + K+N++ + + +D +V ++LD GF L
Sbjct: 4 KRSHNHKDHTAKAIKRRKFNAATAKSSDDAAHDIVSVDQLDWKTVTLPDRLDDAEGFYGL 63
Query: 67 EEIDEASYNLQIPKPEKGKPGK------------KTNTKKRKRSSAN-EEDPGDGDGDED 113
EEI+ + I +P G K K +T K + + + EE G GD E
Sbjct: 64 EEIE----GVDILRPSGGGEIKFRASKSKIKGILKNSTDKSGQPAEDWEEWSGFGDDSEG 119
Query: 114 GNGVQKEQEKNLKNQKGKKKKK----------------KKKGKKIKT---VEESVTVSNG 154
G+ E EK +N ++ K +G +IKT ++ V+ +
Sbjct: 120 GDRTTFEAEKKAENHGKVNDRRTKTNHSNKEKESNTLPKDRGPRIKTDNGIKTGVSFAAL 179
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDI 214
D+ EE++ + AW+ L L L S+ RL F PTPIQ ACIPA QG D+
Sbjct: 180 QDEVEEDV--------DVSAWDSLDLSAELQTSLGRLKFSFPTPIQSACIPAVL-QGHDV 230
Query: 215 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 274
IG A TGSGKTLAFG+PI++ L + + G+ E P ALI++PTREL
Sbjct: 231 IGKASTGSGKTLAFGIPIVEYFLG-KYRGGRAPTASEESESTKEPM----ALILSPTREL 285
Query: 275 ALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 331
A Q+ HL ++ A VR+ + GG+S KQ+RLL A ++++ TPGRLWE++
Sbjct: 286 AHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLL-ADADIIIATPGRLWEVVGSMT 344
Query: 332 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 391
L +L + F V+DEADR++ GHF+E++ I++ + + E E+++ +
Sbjct: 345 GFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGERSEREPEPEPDE 404
Query: 392 RKK---RQTLVFSATIALSADFRKKLKH---GSLKLKQS--VNGLNSIETLSERAGMR-A 442
KK RQTLVFSAT F K L+ G ++ + ++ S+E L + R
Sbjct: 405 EKKAEPRQTLVFSAT------FHKGLQQKLSGKIRYRNDDLLDKKESMEYLLRKLNFREE 458
Query: 443 NVAIVDLTNVSVLANKLEESFIE 465
+D+ +S +A L+E ++
Sbjct: 459 RPKFIDVNPISQMAENLKEGLVQ 481
>gi|303311697|ref|XP_003065860.1| ATP-dependent RNA helicase MAK5, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105522|gb|EER23715.1| ATP-dependent RNA helicase MAK5, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 783
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 242/503 (48%), Gaps = 82/503 (16%)
Query: 20 RRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GFLSL 66
+R K A+ + K+N++ + + +D +V ++LD GF L
Sbjct: 4 KRSHNHKDHTAKAIKRRKFNAATAKSSDDAAHDIVSVDQLDWKTVTLPDRLDDAEGFYGL 63
Query: 67 EEIDEASYNLQIPKPEKGKPGK------------KTNTKKRKRSSAN-EEDPGDGDGDED 113
EEI+ + I +P G K K +T K + + + EE G GD E
Sbjct: 64 EEIE----GVDILRPSGGGEIKFRASKSKIKGILKNSTDKSGQPAEDWEEWSGFGDDSEG 119
Query: 114 GNGVQKEQEKNLKNQKGKKKKK----------------KKKGKKIKT---VEESVTVSNG 154
G+ E EK +N ++ K +G +IKT ++ V+ +
Sbjct: 120 GDRTTFEAEKKAENHGKVNDRRTKTNHSNKEKESNTLPKDRGPRIKTDNGIKTGVSFAAL 179
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDI 214
D+ EE++ + AW+ L L L S+ RL F PTPIQ ACIPA QG D+
Sbjct: 180 QDEVEEDV--------DVSAWDSLDLSAELQTSLGRLKFSFPTPIQSACIPAVL-QGHDV 230
Query: 215 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 274
IG A TGSGKTLAFG+PI++ L + + G+ E P ALI++PTREL
Sbjct: 231 IGKASTGSGKTLAFGIPIVEYFLG-KYRGGRAPTASEESESTKEPM----ALILSPTREL 285
Query: 275 ALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 331
A Q+ HL ++ A VR+ + GG+S KQ+RLL A ++++ TPGRLWE++
Sbjct: 286 AHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLL-ADADIIIATPGRLWEVVGSMT 344
Query: 332 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 391
L +L + F V+DEADR++ GHF+E++ I++ + + E E+++ +
Sbjct: 345 GFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGERSEREPEPEPDE 404
Query: 392 RKK---RQTLVFSATIALSADFRKKLKH---GSLKLKQS--VNGLNSIETLSERAGMR-A 442
KK RQTLVFSAT F K L+ G ++ + ++ S+E L + R
Sbjct: 405 EKKAEPRQTLVFSAT------FHKGLQQKLSGKIRYRNDDLLDKKESMEYLLRKLNFREE 458
Query: 443 NVAIVDLTNVSVLANKLEESFIE 465
+D+ +S +A L+E ++
Sbjct: 459 RPKFIDVNPISQMAENLKEGLVQ 481
>gi|353235877|emb|CCA67883.1| related to MAK5-ATP-dependent RNA helicase [Piriformospora indica
DSM 11827]
Length = 703
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 173/305 (56%), Gaps = 32/305 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+ L L P L++ I GF +PTPIQ+ +P + G+D+IG A+TGSGKTLAF LPI++
Sbjct: 127 WSNLGLSPTLLRRIKDQGFIKPTPIQRETLPLST-SGRDVIGIAQTGSGKTLAFALPILR 185
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN---- 290
+L K L + K +L+ALI+ PTRELALQV+ H+ A +
Sbjct: 186 HILSTNRL--KSLRRQ---------KRNLKALIVAPTRELALQVSAHINACAPQRSKEEI 234
Query: 291 -------VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 343
V V IVGGMS +KQ R+L+ +++V TPGRLWEL+S ++ ++ + FF
Sbjct: 235 EAHLPPLVSVATIVGGMSQQKQTRMLERGADVIVATPGRLWELLSDNDELTTQIRQVRFF 294
Query: 344 VLDEADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 402
VLDEADRM+ENGHF EL II + + S E Q ++ + S + + QT VFSA
Sbjct: 295 VLDEADRMVENGHFAELDKIIRLTARPDPNSLEAQIQEVKLEDDTSDSAQNQMQTFVFSA 354
Query: 403 TIALSADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLE 460
T +S D ++ LK H K K S ++I+ L R R AIVDL+ + + +
Sbjct: 355 T--MSKDLQQNLKRHKRFKDKSS----STIDDLILRLDFRDEQPAIVDLSPKDGVVSTFQ 408
Query: 461 ESFIE 465
ES +E
Sbjct: 409 ESKVE 413
>gi|91207159|sp|Q2UMY7.1|MAK5_ASPOR RecName: Full=ATP-dependent RNA helicase mak5
gi|83766938|dbj|BAE57078.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 757
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 236/467 (50%), Gaps = 66/467 (14%)
Query: 40 SSFSAADNDPFAFLVGSNELD-------------GGFLSLEEIDEASYNLQIPKPEKGKP 86
S +A D+D + +VG NEL+ GGF LEEI+ + I + E G
Sbjct: 26 SDATAEDSD-WDGIVGMNELNWKEVALPDRLEDAGGFFGLEEIE----GVDIIRSE-GNG 79
Query: 87 GKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKK--------- 137
K K+ + ++ +D +G GD+D V +E+ K +++ + KK K
Sbjct: 80 EIKFKKKEPEETNTQSDDEWEGFGDDD-QAVSQEESKETQDEPNESDKKAKVKESKNAKK 138
Query: 138 ----------KGKKIKTVE--ESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLM 185
K +K K VE E + +G A L E + + AW L L P ++
Sbjct: 139 EKKKNAKDARKEQKEKAVESKEDKGIKSGLSFAA--LQEEEDDGADVSAWESLGLSPEIL 196
Query: 186 KSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEE-REKAG 244
I ++ F PT +QKACIP G+D+IG A TGSGKTLAFG+PI++ LE+ R K
Sbjct: 197 AGISKMKFTTPTSVQKACIPPIL-DGRDVIGKASTGSGKTLAFGIPILEYYLEKLRSKT- 254
Query: 245 KMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGINVRVVPIVGGMS 301
+K E + P AL+++PTRELA Q+ H+ EV A G+N R+ + GG+S
Sbjct: 255 ----QKDSEKTETTPI----ALVLSPTRELAHQLAKHIGEVVSHAPGVNARIALLTGGLS 306
Query: 302 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 361
+KQ+R+L ++V+GTPGR+WE++S G + ++ + F V+DEADR++ GHF+E
Sbjct: 307 LQKQQRVL-TNADIVIGTPGRVWEVLSSGHGLIRKMQAIKFLVIDEADRLLSEGHFKEAH 365
Query: 362 SIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIALSADFRKKLK-HGSL 419
I+ L +G+ + + L K RQTLVFSAT D ++KL G
Sbjct: 366 EILAALDRV---VDGEFPDESSDESDDELDPKSGRQTLVFSAT--FHRDLQQKLAGKGKW 420
Query: 420 KLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 465
++ S+E L ++ R +D+ VS +A L+E +E
Sbjct: 421 TGGDIMSQKESMEYLLQKLNFREEKPRFIDVNPVSQMAENLKEGIVE 467
>gi|325185978|emb|CCA20482.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 743
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 165/293 (56%), Gaps = 36/293 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W LH ++++++ F PT IQ+ I AA Q +D++G A TGSGKTLAFG+PI+Q
Sbjct: 152 WEAFNLHHTILEALHDNKFLAPTVIQRKAIAAALIQREDVVGIASTGSGKTLAFGIPILQ 211
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L + +G + G +ALII PTRELALQ+ HLK + K ++ +
Sbjct: 212 HFLNK--TSGALKSHPG-----------CKALIIAPTRELALQIQKHLKAMLKDGSIGIS 258
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH-TLSFFVLDEADRMIE 353
+VGGMS +KQER+L PE+V+ TPGRLW+++ G KH LH +L F V+DEADRM++
Sbjct: 259 VLVGGMSLQKQERVLSYEPEIVIATPGRLWDIVQNGNKHFENLHLSLEFLVVDEADRMLQ 318
Query: 354 NGHFRELQSIIDML---PMTNGSNEG---QSEQTQTCVTVSSLQRKK----------RQT 397
G +++L+ ++ ++ P + ++ G +E +T + ++ ++ RQT
Sbjct: 319 TGSYKDLEKLLKLINSKPASTKASRGGDSDAEDKKTLLREDAVNTRQFDLRGNKAQSRQT 378
Query: 398 LVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
+FSAT+ RKK G N L+ + T+ +R G R I+DL+
Sbjct: 379 FLFSATMTGKCHNRKKQSKG------KTNTLDMLHTVIQRVGFRKKPTIIDLS 425
>gi|261205266|ref|XP_002627370.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis SLH14081]
gi|239592429|gb|EEQ75010.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis SLH14081]
Length = 772
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 236/505 (46%), Gaps = 91/505 (18%)
Query: 21 RKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GFLSLE 67
+KR R +R+ + + + + AD + +VG ++LD GF LE
Sbjct: 3 KKRERDTRDPSRKSKKRQRVEVTGADGE----IVGIDQLDWKEVALPDRLEDAEGFFGLE 58
Query: 68 EIDEASYNLQIPKPE-------KGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKE 120
EID + I +P K K NT + SS ++D + G D G E
Sbjct: 59 EID----GVDIVRPTGNGEVKFKVSRNKVKNTAAKDISSDTKDDADEWSGISDDEGPNDE 114
Query: 121 QEKNLKNQKGK-----------------------------KKKKKKKGKKIKTVEESVTV 151
++K ++ + K + KK ++ ++
Sbjct: 115 GVDDVKEKQTQADKTEKRKEKKKKKQEKAQNKKTEKLKETKLQNNKKATPKDELQSGISF 174
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
+D EEE+ + AW L + + S+ +L F +PTPIQ ACIPA A G
Sbjct: 175 EALNEDDEEEV--------DVSAWGPLDISAEIQTSLSKLKFAKPTPIQSACIPAIA-AG 225
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 271
D++G A TGSGKTLAFG+PI++ LE R + E A K ALI++PT
Sbjct: 226 HDVVGKASTGSGKTLAFGIPILEYYLETRHDEPSQQHKDRESAGKDPI-----ALILSPT 280
Query: 272 RELALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 328
RELA Q+ H+ + A IN R+ + GG+S +KQ+RLL A ++VVGTPGRLW+++S
Sbjct: 281 RELAHQLAKHITALCTNAPNINARIALLTGGLSVQKQQRLL-ANADIVVGTPGRLWDVIS 339
Query: 329 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM--TNGSNEGQSEQTQTCVT 386
G L + F V+DEADR++ GHF+E++ I+ L + TN E + +++
Sbjct: 340 TGHGLLRRFQNIKFLVVDEADRLLSEGHFKEVEEIVTALDLKETNDGIEEPASHSESTDD 399
Query: 387 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-----LNSIETLSERAGMR 441
S R RQTLVFSAT F K L+ + +G S+E L ++ R
Sbjct: 400 ASKAPR--RQTLVFSAT------FHKGLQQKLAGKSRFFDGDLLDNKQSMEYLLKKLNFR 451
Query: 442 AN-VAIVDLTNVSVLANKLEESFIE 465
+ +D+ V+ +A L+E +E
Sbjct: 452 EDKPKFIDVNPVAQMAENLKEGLVE 476
>gi|322710764|gb|EFZ02338.1| ATP dependent RNA helicase, putative [Metarhizium anisopliae ARSEF
23]
Length = 794
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 208/382 (54%), Gaps = 31/382 (8%)
Query: 104 DPGDGDGDEDGNGVQKEQE--------KNLKNQKGKKK-----KKKKKGKKIKTVEESVT 150
D G+G +DG +K QE K K QKG+++ +KK K +KI + +
Sbjct: 126 DSGEGSDSQDGLEGEKSQETISAVKQGKASKTQKGQQQSDNGTQKKSKQQKIADKKLQKS 185
Query: 151 VSNGPDDAEEELVSEAEISTEFDA-----WNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
S+G + L + A+ E D W L L P L+ +I +LGF +PT IQ+ IP
Sbjct: 186 ASHGAGNEFLALAAMADEEAETDDLDMGDWVALNLSPNLVSAIAKLGFSKPTAIQEKSIP 245
Query: 206 AAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 265
G D+IG A+TGSGKTLAFG+PI+++ L+ E+ + G++ K +G + A
Sbjct: 246 EII-AGGDVIGKAQTGSGKTLAFGIPIVEKWLDMHEEQEDQAGDDGDQPNKKNREGPM-A 303
Query: 266 LIITPTRELALQVTDHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 323
+I++PTRELA Q+ DH+K V G+ + + + GG+S +KQ+R L+ + ++V+GTPGRL
Sbjct: 304 VILSPTRELAKQIGDHIKAVCDGLPASPYICVVTGGLSIQKQQRQLE-KADIVIGTPGRL 362
Query: 324 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQT 383
WE++ G K + + F V+DEADR+ + G F+E ++II L N G S+ +
Sbjct: 363 WEVLDGDAKLQQQFTRIKFLVVDEADRLFKVGQFKEAENIIGALDRENPEENGYSDNSD- 421
Query: 384 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRAN 443
+ + ++RQTLVFSAT + + KL G K ++ + + L + R
Sbjct: 422 ----AEDETRERQTLVFSAT--FDKNLQTKLA-GKGKSAKTGSDEEKMAYLMKCLKFRGE 474
Query: 444 VAIVDLTNVSVLANKLEESFIE 465
+D+ VS +A+ L E IE
Sbjct: 475 PKFIDVNPVSQMADNLREGLIE 496
>gi|322795046|gb|EFZ17894.1| hypothetical protein SINV_04950 [Solenopsis invicta]
Length = 736
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 185/348 (53%), Gaps = 48/348 (13%)
Query: 143 KTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKA 202
+ ++ +S D +++E ++E I AW+ + + ++K++ F PT IQ
Sbjct: 114 RQIDSDSDLSCDMDSSKKESLAEINIG----AWSSMGVPAAVIKALADQNFHSPTMIQAQ 169
Query: 203 CIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG------KMLEEKGEEAEK 256
+PAA +DI+GAAETGSGKTLAFG+PI++ +L+ + + K + E E E
Sbjct: 170 TLPAAILGRRDILGAAETGSGKTLAFGIPIIKGILDLKSQNDGQNCPVKEIGETDSENED 229
Query: 257 YA-----------------PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGG 299
+ P ALI+TPTRELA+Q+ +HL + AK ++++ ++GG
Sbjct: 230 LSQNCVNVVNNAKLDDHNTPIKPFYALILTPTRELAVQIKNHLTQAAKYTDIKIAIVLGG 289
Query: 300 MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 359
M+ KQER+L PE+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+E
Sbjct: 290 MAAVKQERILNKGPEIVIATPGRLWELIEEGNSHLNQIDSVRYLAIDETDRMMEKGHFQE 349
Query: 360 LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSL 419
L D+L N + E +RKKRQT VFSAT+ + D L
Sbjct: 350 LH---DILEKMNANPE---------------KRKKRQTFVFSATLTMVHDLPDYLDKKKK 391
Query: 420 KLKQS-VNGLNSIETLSERAGMR--ANVAIVDLTNVSVLANKLEESFI 464
+ +S + L S + L + + N +VDLT S +A+ L E I
Sbjct: 392 RYARSKICKLTSDQKLQKIIQLLKIKNPKVVDLTKQSGMADNLTECRI 439
>gi|302510172|ref|XP_003017046.1| hypothetical protein ARB_05340 [Arthroderma benhamiae CBS 112371]
gi|291180616|gb|EFE36401.1| hypothetical protein ARB_05340 [Arthroderma benhamiae CBS 112371]
Length = 746
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 179/313 (57%), Gaps = 35/313 (11%)
Query: 165 EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGK 224
EA+I + AW+ L L P L S+ RL F +PTPIQKA IP G+D+IG A TGSGK
Sbjct: 162 EADI--DVSAWDSLDLRPELQTSLSRLRFAQPTPIQKATIPEIL-GGRDVIGKAATGSGK 218
Query: 225 TLAFGLPIMQRLL---EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 281
TLAFGLPI+Q LL E+R L + G++ ALI++PTRELA Q+ H
Sbjct: 219 TLAFGLPILQCLLNRQEQRPSTSLALSKSGDKKPI--------ALILSPTRELAHQLVKH 270
Query: 282 LKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH 338
LKEV A ++ + + GG+S KQ+R L A +++VGTPGRLW+++S + L +L
Sbjct: 271 LKEVTSSAPNVDAYIASVTGGLSVHKQQRQL-AEADIIVGTPGRLWDMVSSTPQILTKLR 329
Query: 339 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTL 398
++ F V+DEADR++ GHF+E+ ++ L T S+E E + + RQTL
Sbjct: 330 SIKFLVVDEADRLLSEGHFKEVGELLSALDKTRTSDEDVDEAPEEEEEPAG-----RQTL 384
Query: 399 VFSATIALSADFRKKLKHGSLKLKQSV--NGLN---SIETLSERAGMR-ANVAIVDLTNV 452
VFSAT F+K L+ +K S N L+ S+E L ++ R +D+ V
Sbjct: 385 VFSAT------FQKGLQQKLVKRDHSFHDNLLDKKESMEYLLKKLRFRDEKPRFIDVNPV 438
Query: 453 SVLANKLEESFIE 465
S +A+ L+E IE
Sbjct: 439 SQMADNLKEGIIE 451
>gi|313238237|emb|CBY13329.1| unnamed protein product [Oikopleura dioica]
Length = 598
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 146/252 (57%), Gaps = 40/252 (15%)
Query: 159 EEELVSEAE--ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIG 216
EE+ +S +E + W L L+++I LGFK PT IQ+ CIP + K I+G
Sbjct: 124 EEKAISNSEYVFQNKLPEWRRFNLDVALLRAIDSLGFKSPTDIQRQCIPKGLNSKKTILG 183
Query: 217 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELAL 276
AAETGSGKT+A+GLPI+Q+++ + + E + P+ ALI+ PTRELA+
Sbjct: 184 AAETGSGKTIAYGLPILQKIIGYLDFS---------EEKTVGPQ----ALILCPTRELAM 230
Query: 277 QVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL-KARPELVVGTPGRLWELMSGGEKHLV 335
QV D ++ V+K +V+ IVGGM+ EKQ+R+L K RPE++V TPGR WEL G+++L
Sbjct: 231 QVHDSIRLVSKFTSVKTTAIVGGMAAEKQQRVLSKIRPEIIVATPGRFWELRETGQEYLQ 290
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
L ++ +FV+DEADRM E GHF EL I+ L ++
Sbjct: 291 NLRSIKYFVVDEADRMAEKGHFAELDKIVGTLS------------------------RES 326
Query: 396 QTLVFSATIALS 407
Q VFSAT+ L+
Sbjct: 327 QKFVFSATLTLT 338
>gi|239611412|gb|EEQ88399.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis ER-3]
Length = 772
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 211/442 (47%), Gaps = 87/442 (19%)
Query: 21 RKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GFLSLE 67
+KR R +R+ + + + + AD + +VG ++LD GF LE
Sbjct: 3 KKRERDTRDPSRKSKKRQRVEVTGADGE----IVGIDQLDWKEVALPDRLEDAEGFFGLE 58
Query: 68 EIDEASYNLQIPKPE-------KGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKE 120
EID + I +P K K NT + SS ++D + G D G E
Sbjct: 59 EID----GVDIVRPTGNGEVKFKVSRNKVKNTAAKDISSDTKDDADEWSGISDDEGPNDE 114
Query: 121 QEKNLKNQ-----------------------------KGKKKKKKKKGKKIKTVEESVTV 151
++K + K K + KK ++ ++
Sbjct: 115 GVDDVKEKQTQADKTEKRKEKKKKKQEKAQNKKPEKLKETKLQNNKKATPKDELQSGISF 174
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
+D EEE+ + AW L + + S+ +L F +PTPIQ ACIPA A G
Sbjct: 175 EALNEDDEEEV--------DVSAWGPLDISAEIQTSLSKLKFAKPTPIQSACIPAIA-AG 225
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEERE----KAGKMLEEKGEEAEKYAPKGHLRALI 267
D++G A TGSGKTLAFG+PI++ LE R + K LE G++ ALI
Sbjct: 226 HDVVGKASTGSGKTLAFGIPILEYYLETRHDEPSQQHKDLESVGKDP---------IALI 276
Query: 268 ITPTRELALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 324
++PTRELA Q+ H+ + A IN R+ + GG+S +KQ+RLL A ++VVGTPGRLW
Sbjct: 277 LSPTRELAHQLAKHITALCTNAPNINARIALLTGGLSVQKQQRLL-ANADIVVGTPGRLW 335
Query: 325 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM--TNGSNEGQSEQTQ 382
+++S G L + F V+DEADR++ GHF+E++ I+ L + TN E + ++
Sbjct: 336 DVISTGHGLLRRFQNIKFLVVDEADRLLSEGHFKEVEEIVTALDLKETNDGIEEPASHSE 395
Query: 383 TCVTVSSLQRKKRQTLVFSATI 404
+ S R RQTLVFSAT
Sbjct: 396 STDDASKAPR--RQTLVFSATF 415
>gi|391340745|ref|XP_003744697.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Metaseiulus
occidentalis]
Length = 757
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/261 (41%), Positives = 148/261 (56%), Gaps = 49/261 (18%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
EE V+V DDAE+ L E W + P ++K++ +L + EP+ IQ C+
Sbjct: 233 EEDVSVE--LDDAEKALTKE---------WEIFEIEPRILKALAQLRYTEPSEIQSQCLI 281
Query: 206 AAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 265
A DI+GAAETGSGKTLAFG+P++ RLL+ER + L A
Sbjct: 282 PAIRDRLDILGAAETGSGKTLAFGIPLVHRLLQER------------------CRNKLGA 323
Query: 266 LIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 325
LI+TPTRELA+Q+ HL ++ K N+ VV IVGG+S EKQ RLL RPE++V TPGRL+E
Sbjct: 324 LILTPTRELAVQIKKHLMDITKFTNLHVVCIVGGLSHEKQTRLLAKRPEIIVATPGRLFE 383
Query: 326 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 385
L+ + +L ++ V+DEADRMI+ GHF E+Q I+ + N + G
Sbjct: 384 LVQEDPQLQEQLISVRCLVIDEADRMIQKGHFEEMQLILKFM---NSNRIG--------- 431
Query: 386 TVSSLQRKKRQTLVFSATIAL 406
KRQ LVFSAT+ +
Sbjct: 432 --------KRQNLVFSATLTM 444
>gi|241253045|ref|XP_002403786.1| RNA helicase, putative [Ixodes scapularis]
gi|215496560|gb|EEC06200.1| RNA helicase, putative [Ixodes scapularis]
Length = 463
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 149/260 (57%), Gaps = 32/260 (12%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA 206
E T ++ P + E + + E + AW + ++K++ L F +PTPIQ +P+
Sbjct: 37 EPKTAADNPSNDETPV--QEEDQKDMSAWLNCYVPEPVLKALAELNFTQPTPIQAQTLPS 94
Query: 207 AAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRAL 266
A D++GAAETGSGKTLAFG+PI+ + E++ + G P L+AL
Sbjct: 95 AIRDHMDVMGAAETGSGKTLAFGIPILHHIAEQKARIGD------------GPMS-LQAL 141
Query: 267 IITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWEL 326
++TPTRELA+QV HL+ AK + VV ++GG+S +KQ RLLK RPE+VV TPGRLWEL
Sbjct: 142 VLTPTRELAIQVKQHLQSAAKYTGIGVVNVIGGLSADKQLRLLKRRPEIVVATPGRLWEL 201
Query: 327 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT 386
+ HL ++ + + V+DEADRM+E GHF +L ++ + M +G
Sbjct: 202 VDQNTPHLSDVSNVRYLVIDEADRMVEKGHFEDLTRLLAL--MNADRVDGA--------- 250
Query: 387 VSSLQRKKRQTLVFSATIAL 406
K+RQ VFSAT+ +
Sbjct: 251 ------KRRQNFVFSATLTM 264
>gi|327348577|gb|EGE77434.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis ATCC
18188]
Length = 772
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 140/438 (31%), Positives = 209/438 (47%), Gaps = 79/438 (18%)
Query: 21 RKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDG-------------GFLSLE 67
+KR R +R+ + + + + AD + +VG ++LD GF LE
Sbjct: 3 KKRERDTRDPSRKSKKRQRVEVTGADGE----IVGIDQLDWKEVALPDRLEDAEGFFGLE 58
Query: 68 EIDEASYNLQIPKPE-------KGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKE 120
EID + I +P K K NT + SS ++D + G D G E
Sbjct: 59 EID----GVDIVRPTGNGEVKFKISRNKVKNTAAKDISSDTKDDADEWSGISDDEGPNDE 114
Query: 121 QEKNLKNQKGK-----------------------------KKKKKKKGKKIKTVEESVTV 151
++K ++ + K + KK ++ ++
Sbjct: 115 GVDDVKEKQTQADKTEKRKEKKKKKQEKAQNKKTEKLKETKLQNNKKATPKDELQSGISF 174
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
+D EEE+ + AW L + + S+ +L F +PTPIQ ACIPA A G
Sbjct: 175 EALNEDDEEEV--------DVSAWGPLDISAEIQTSLSKLKFAKPTPIQSACIPAIA-AG 225
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 271
D++G A TGSGKTLAFG+PI++ LE R + E A K ALI++PT
Sbjct: 226 HDVVGKASTGSGKTLAFGIPILEYYLETRHDEPSQQHKDPESAGKDPI-----ALILSPT 280
Query: 272 RELALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 328
RELA Q+ H+ + A IN R+ + GG+S +KQ+RLL A ++VVGTPGRLW+++S
Sbjct: 281 RELAHQLAKHITALCTNAPNINARIALLTGGLSVQKQQRLL-ANADIVVGTPGRLWDVIS 339
Query: 329 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM--TNGSNEGQSEQTQTCVT 386
G L + F V+DEADR++ GHF+E++ I+ L + TN E + +++
Sbjct: 340 TGHGLLRRFQNIKFLVVDEADRLLSEGHFKEVEEIVTALDLKETNDGIEEPASHSESTDD 399
Query: 387 VSSLQRKKRQTLVFSATI 404
S R RQTLVFSAT
Sbjct: 400 ASKAPR--RQTLVFSATF 415
>gi|332028699|gb|EGI68731.1| ATP-dependent RNA helicase DDX24 [Acromyrmex echinatior]
Length = 743
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/456 (30%), Positives = 232/456 (50%), Gaps = 81/456 (17%)
Query: 56 SNELDGGFLSLEEIDEASYNLQIPKPEKGKPGKKTNTK----KRKRSSANEEDPGDGDGD 111
SN+++G + +EE+ + YNL+ K GK T+ K K+S + + P + + +
Sbjct: 23 SNDIEG-LIGIEELTD--YNLE----RSSKKGKIITTRVKSTKEKKSVSKRKYPKEWE-E 74
Query: 112 EDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPD-------------DA 158
D N ++ +K+ K ++ + K+ K K +KIK+ +T D+
Sbjct: 75 TDINNIEPSTKKS-KIKQAEVKRLKIKNEKIKSANFKITDQQTNSDSDNSDSDSYCDIDS 133
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
+ L A+I+ E AW + + ++K++ F PT IQ +PAA +DI+GAA
Sbjct: 134 NKNL---AKINAE--AWRSMGVPTAVIKALADQNFHSPTMIQTQTLPAAILGRRDILGAA 188
Query: 219 ETGSGKTLAFGLPIMQRLLE-------------------------EREKAGKMLEEKGEE 253
ETGSGKTLAFG+PI++ +L+ E + ++ +K +
Sbjct: 189 ETGSGKTLAFGIPIIKGILDLKNQNKDQNSEKDTEESDSENIVLSEFDNCVNIVNDKKLD 248
Query: 254 AEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARP 313
P L ALI+TPTRELA+Q+ +HL + AK ++++ ++GGM+ KQER+L P
Sbjct: 249 DCHNIPTKPLYALILTPTRELAMQIKNHLTQAAKYTDIKIAVVLGGMAAVKQERILNKGP 308
Query: 314 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 373
E+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+EL D+L N
Sbjct: 309 EIVIATPGRLWELIQEGNSHLNQIDSIRYLAIDETDRMMEKGHFQELH---DLLEKMNA- 364
Query: 374 NEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF-----RKKLKHGSLKLKQSVNGL 428
+ +KRQT VFSAT+ + D RKK ++ K+ + +
Sbjct: 365 --------------DPAKMQKRQTFVFSATLTMVHDLPDYLDRKKKRYARSKICK-LTPD 409
Query: 429 NSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
++ + + ++ N +VDLT S A+ L E I
Sbjct: 410 QKLQKIIQLLKIK-NPKVVDLTKESGTADNLTECRI 444
>gi|302659739|ref|XP_003021557.1| hypothetical protein TRV_04404 [Trichophyton verrucosum HKI 0517]
gi|291185460|gb|EFE40939.1| hypothetical protein TRV_04404 [Trichophyton verrucosum HKI 0517]
Length = 746
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 174/311 (55%), Gaps = 33/311 (10%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
E + AW+ L L P L S+ R F +PTPIQKA IP G+D+IG A TGSGKTL
Sbjct: 162 EADVDVSAWDSLDLRPELQTSLSRFKFAQPTPIQKATIPEIL-GGRDVIGKAATGSGKTL 220
Query: 227 AFGLPIMQRLL---EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
AFGLPI+Q LL E+R L + G++ ALI++PTRELA Q+ HLK
Sbjct: 221 AFGLPILQYLLNRQEQRPSTSLTLSKSGDKKPV--------ALILSPTRELAHQLVKHLK 272
Query: 284 EV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
EV A ++ + + GG+S KQ+R L A +++VGTPGRLW+++S + L +L ++
Sbjct: 273 EVTSSAPNVDAYIASVTGGLSVHKQQRQL-AEADIIVGTPGRLWDMVSSTPQILTKLRSI 331
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 400
F V+DEADR++ GHF+E+ ++ L T S+E E + + RQTLVF
Sbjct: 332 KFLVVDEADRLLSEGHFKEVGELLSALDKTRTSDEDVDEAPEEEEELGG-----RQTLVF 386
Query: 401 SATIALSADFRKKLKHGSLKLKQSV--NGLN---SIETLSERAGMR-ANVAIVDLTNVSV 454
SAT F+K L+ K S N L+ S+E L ++ + +D+ VS
Sbjct: 387 SAT------FQKGLQQKLAKRDHSFHDNLLDKKESMEYLLKKLRFKDEKPRFIDVNPVSQ 440
Query: 455 LANKLEESFIE 465
+A+ L+E IE
Sbjct: 441 MADNLKEGIIE 451
>gi|345560201|gb|EGX43326.1| hypothetical protein AOL_s00215g62 [Arthrobotrys oligospora ATCC
24927]
Length = 801
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 183/322 (56%), Gaps = 22/322 (6%)
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAET 220
E +S+ ++ + AW L L P ++++ +L F EPTPIQK IP+ G D+IG A T
Sbjct: 190 EGLSDDDLEVDLPAWESLSLSPYTLQALQKLTFTEPTPIQKLSIPSII-AGHDLIGKAAT 248
Query: 221 GSGKTLAFGLPIMQRLL---EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQ 277
GSGKTLAFG+PI + L ++R K+L E+ +EA+ L ALI++PTRELA Q
Sbjct: 249 GSGKTLAFGIPIFEHWLSSSKDRAVPAKLLSEEDKEADASKLTNPLSALILSPTRELAHQ 308
Query: 278 VTDHLKEV--AKGINV--RVVPIVGGMSTEKQERLL--KARPELVVGTPGRLWELMSGGE 331
+T+H++ + A G+ VV + GG+S +KQ R L ++VV TPGRLWE++S
Sbjct: 309 ITEHIQALITASGVTSPPHVVSLTGGLSIQKQLRKLGQSGGADVVVATPGRLWEILSEKS 368
Query: 332 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 391
+ F V+DEADR+++ GHF+E++ I+D+L + E ++ + T+ + +
Sbjct: 369 GYTRWFRKTRFLVIDEADRVLQEGHFKEVEQILDVL-TRDAEEEDVAQNPEVYGTIKTFK 427
Query: 392 RKK---RQTLVFSATIALSADFRKKLKHGSLKLKQSVNGL----NSIETLSERAGMR-AN 443
K RQ LVFSAT S D ++KL K S +GL +S++ L ++ R +
Sbjct: 428 NSKPKDRQMLVFSAT--FSKDLQQKLSSKK-SWKNSNSGLLDDKDSLDYLLKKLPFREEH 484
Query: 444 VAIVDLTNVSVLANKLEESFIE 465
VD+ V +A L E +E
Sbjct: 485 PQWVDVNPVDQMAENLREGIVE 506
>gi|378731664|gb|EHY58123.1| hypothetical protein HMPREF1120_06141 [Exophiala dermatitidis
NIH/UT8656]
Length = 733
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 151/436 (34%), Positives = 220/436 (50%), Gaps = 68/436 (15%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKTNTKKRKRSSA------NEEDPGD-GDGDED- 113
GF LEEI+ ++++ + E G R RS+A NEED G+ G ED
Sbjct: 57 GFYGLEEIE----DVEVVRDETGH-----QVTFRPRSAAALLDEPNEEDAGEEWQGFEDE 107
Query: 114 ---GNGVQKEQEKNLKNQKGKKKK-------KKKKGKKIKTVEESVTVSNGPDDAEEELV 163
G+ + K+ + K+ + KK K ++ ++ + PD ++
Sbjct: 108 VVKGDSRPVPESKSAAPKASKQPEQALASVSKKSKSQQEDDIDADLGFDVLPDSTDD--- 164
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
+A++S AW +L L P+ + + RLGF PTPIQKA +P QG D+IG A TGSG
Sbjct: 165 GKADVS----AWKDLGLSPITLSQLSRLGFSNPTPIQKAAVPVIL-QGHDVIGKAVTGSG 219
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
KTLAFG+PI + L E AG K K L ALI+ PTRELALQ+ HL
Sbjct: 220 KTLAFGIPIFEAWLAT-ENAGFKGPAK--------TKDSLLALILAPTRELALQLNRHLN 270
Query: 284 EVAKGIN--VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH-----LVE 336
E+ G+ RV + GG+S KQ+R L + ++VV TPGRLWE+M+ + L E
Sbjct: 271 ELCIGLENAPRVCAVTGGLSVYKQQRQL-STADIVVATPGRLWEVMNDSATNYDTDALAE 329
Query: 337 -LHTLSFFVLDEADRMIENGHFRELQSIIDMLP---MTNGSNEGQSEQTQTCVTVSSLQR 392
L + F V+DEADR++ GHF+E++SI+D L + + E S+++ +
Sbjct: 330 RLKKIQFLVVDEADRLLSEGHFKEVESILDALDREVIDEDAPEAPSKES---------TK 380
Query: 393 KKRQTLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDL 449
RQTLVFSAT L K K G + + ++ S+E L + R VD+
Sbjct: 381 SHRQTLVFSATFHKGLQKKLTSKNKSGWRQSTELLDNQQSMEYLLRKLSFREEKPTFVDV 440
Query: 450 TNVSVLANKLEESFIE 465
S +A+ L ES +E
Sbjct: 441 NPASQMASALSESIVE 456
>gi|143345244|sp|Q0CI35.2|MAK5_ASPTN RecName: Full=ATP-dependent RNA helicase mak5
Length = 774
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 177/307 (57%), Gaps = 20/307 (6%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
+E + + AW L L P ++ S+ +L F PT +QK+CIP G D++G A TGSG
Sbjct: 193 AEEDDGVDISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPPIL-DGHDVVGKASTGSG 251
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
KTLAFG+PI++ LE++ + K ++K E + ALI++PTRELA Q+ H+
Sbjct: 252 KTLAFGIPILEYYLEKKRRETKNKDDKKETSPI--------ALILSPTRELAHQLVKHIG 303
Query: 284 EV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
EV A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++SGG+ + ++ +
Sbjct: 304 EVITHAPGVNARIALLTGGLSVQKQQRLLNG-ADIVIGTPGRVWEVLSGGQGLISKMKEI 362
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 400
+ V+DEADR++ GHF+E I+ L ++ +E+ ++ S Q RQTLVF
Sbjct: 363 KYLVVDEADRLLSEGHFKEAHEILAALDREEINDFPGAEEDESDDEDSKTQ---RQTLVF 419
Query: 401 SATIALSADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANK 458
SAT D ++KL G +N S+E L ++ R +D+ VS +A
Sbjct: 420 SAT--FHRDLQQKLAGKGKWTGSDLMNKQESMEYLLKKLNFREEKPKFIDVNPVSQMAEG 477
Query: 459 LEESFIE 465
L+E +E
Sbjct: 478 LKEGIVE 484
>gi|170053020|ref|XP_001862485.1| ATP-dependent RNA helicase DDX24 [Culex quinquefasciatus]
gi|167873707|gb|EDS37090.1| ATP-dependent RNA helicase DDX24 [Culex quinquefasciatus]
Length = 817
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 152/278 (54%), Gaps = 54/278 (19%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
S ++ W EL + +++++ GF++PT IQ +PAA +D++GAAETGSGKTLAF
Sbjct: 217 SADYFKWTELGVSEPIVRALADKGFRQPTEIQTLSLPAAILGKRDLLGAAETGSGKTLAF 276
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKY----------------APKG----------- 261
G+P+++ +++ + G +K + E AP G
Sbjct: 277 GIPLLEGIMKLKANGGLKTVKKSDAEESREGHELTPEPEELEFYPAPDGGDSVLAAQDLE 336
Query: 262 ---------HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKAR 312
L ALI+TPTRELA+Q+ DHLK V K ++++ + GG++ KQER+LK
Sbjct: 337 REKKKDLNKPLYALILTPTRELAVQINDHLKAVTKYTDIQIATVFGGLAVVKQERMLKRC 396
Query: 313 PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 372
PE+V+ TPGRLWELM G HL ++ + F V+DE DRM+E GHF EL+ +++ML
Sbjct: 397 PEIVIATPGRLWELMQAGNHHLSKMDQIRFLVIDETDRMLEKGHFDELKQLLEML----- 451
Query: 373 SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
Q+E+ K R+ +FSAT+ L D
Sbjct: 452 ---NQNEEAT----------KLRRNYIFSATLTLDHDL 476
>gi|119470070|ref|XP_001258007.1| ATP dependent RNA helicase, putative [Neosartorya fischeri NRRL
181]
gi|143345269|sp|A1DMT9.1|MAK5_NEOFI RecName: Full=ATP-dependent RNA helicase mak5
gi|119406159|gb|EAW16110.1| ATP dependent RNA helicase, putative [Neosartorya fischeri NRRL
181]
Length = 777
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 183/308 (59%), Gaps = 18/308 (5%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
+E + + AW+ L L P ++ + ++ F PT +Q+ACIP +G D+IG A TGSG
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFASPTSVQEACIPQIL-EGHDVIGKASTGSG 250
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
KTLAFG+PI++ LE+ K + EK +++EK + ALI++PTRELA Q++ H+
Sbjct: 251 KTLAFGIPILEHYLEK--KRDDISAEKEKKSEKDSTP---IALILSPTRELAHQLSKHIG 305
Query: 284 EV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
E+ A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++S G+ + ++ +
Sbjct: 306 ELIAQAPGVNARIALLTGGLSVQKQQRLLSG-ADIVIGTPGRVWEILSTGQGLIRKMQQI 364
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLP-MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 399
F V+DEADR++ GHF+E++ I++ L + +G G Q + S +RQTLV
Sbjct: 365 KFLVVDEADRLLSEGHFKEVEEILNALDRVEDGEVPGGENQASEEESDPS---SERQTLV 421
Query: 400 FSATIALSADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLAN 457
FSAT D ++KL G ++ S++ L ++ R +D+ +S +A+
Sbjct: 422 FSAT--FHRDLQQKLAGKGKWTGGDVMDKKESMDYLLQKLNFREEKPKFIDMNPISQMAD 479
Query: 458 KLEESFIE 465
L+E +E
Sbjct: 480 NLKEGIVE 487
>gi|115400477|ref|XP_001215827.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191493|gb|EAU33193.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 791
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 177/307 (57%), Gaps = 20/307 (6%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
+E + + AW L L P ++ S+ +L F PT +QK+CIP G D++G A TGSG
Sbjct: 193 AEEDDGVDISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPPIL-DGHDVVGKASTGSG 251
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
KTLAFG+PI++ LE++ + K ++K E + ALI++PTRELA Q+ H+
Sbjct: 252 KTLAFGIPILEYYLEKKRRETKNKDDKKETSPI--------ALILSPTRELAHQLVKHIG 303
Query: 284 EV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
EV A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++SGG+ + ++ +
Sbjct: 304 EVITHAPGVNARIALLTGGLSVQKQQRLLNG-ADIVIGTPGRVWEVLSGGQGLISKMKEI 362
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 400
+ V+DEADR++ GHF+E I+ L ++ +E+ ++ S Q RQTLVF
Sbjct: 363 KYLVVDEADRLLSEGHFKEAHEILAALDREEINDFPGAEEDESDDEDSKTQ---RQTLVF 419
Query: 401 SATIALSADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANK 458
SAT D ++KL G +N S+E L ++ R +D+ VS +A
Sbjct: 420 SAT--FHRDLQQKLAGKGKWTGSDLMNKQESMEYLLKKLNFREEKPKFIDVNPVSQMAEG 477
Query: 459 LEESFIE 465
L+E +E
Sbjct: 478 LKEGIVE 484
>gi|157119653|ref|XP_001653437.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108875246|gb|EAT39471.1| AAEL008728-PA [Aedes aegypti]
Length = 813
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 173/340 (50%), Gaps = 66/340 (19%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E+ W EL + +++++ GF+ PT IQ +P A +D++GAAETGSGKTLAFG+
Sbjct: 212 EYFKWTELGVSEPIVRALADKGFQTPTEIQTLSLPVAIMGKRDLLGAAETGSGKTLAFGI 271
Query: 231 PIMQRLL-------------------EEREKAGKMLEEKGEEAEKYAPKGH--------- 262
P+++ ++ EE ++ G + EE E Y +
Sbjct: 272 PLLEGIMKLKASEPYRVRKCENASPKEEEQREGHEMTPPPEELEYYPDPSNGDSSVMLQQ 331
Query: 263 -------------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL 309
L ALI+TPTRELA+Q+ DHLK + K ++++ + GG++ KQER+L
Sbjct: 332 NLEKEEDPQLDKPLYALILTPTRELAVQINDHLKAITKYTDIKIATVFGGLAAVKQERML 391
Query: 310 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
K PE+V+ TPGRLWEL+ HL ++ + F V+DE DRM+E GHF EL+ +++M+
Sbjct: 392 KKCPEIVIATPGRLWELIQARNPHLCKVDEIRFLVIDETDRMLERGHFEELKQLLEMI-- 449
Query: 370 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL-----KHGSLKLKQS 424
N + E K R+ +FSAT+ + D + L K+ + + +
Sbjct: 450 -NNNEEAT---------------KLRRNYIFSATLTMDHDLPEHLVAKAKKNKKIHITKE 493
Query: 425 VNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
G + L + GM N +VD+T A+ L ES I
Sbjct: 494 TTG-QRLNNLVQIIGM-TNPKVVDITQQHGTAHTLIESRI 531
>gi|317142764|ref|XP_001819080.2| ATP-dependent RNA helicase mak5 [Aspergillus oryzae RIB40]
gi|391863775|gb|EIT73074.1| RNA helicase [Aspergillus oryzae 3.042]
Length = 769
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 238/478 (49%), Gaps = 76/478 (15%)
Query: 40 SSFSAADNDPFAFLVGSNELD-------------GGFLSLEEIDEASYNLQIPKPE---- 82
S +A D+D + +VG NEL+ GGF LEEI+ + I + E
Sbjct: 26 SDATAEDSD-WDGIVGMNELNWKEVALPDRLEDAGGFFGLEEIE----GVDIIRSEGNGE 80
Query: 83 ---KGKPGKKTNTKKR----KRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKK 135
K K GK + + + ++ +D +G GD+D V +E+ K +++ + KK
Sbjct: 81 IKFKAKAGKPKKSILKKKEPEETNTQSDDEWEGFGDDD-QAVSQEESKETQDEPNESDKK 139
Query: 136 KK-------------------KGKKIKTVE--ESVTVSNGPDDAEEELVSEAEISTEFDA 174
K K +K K VE E + +G A L E + + A
Sbjct: 140 AKVKESKNAKKEKKKNAKDARKEQKEKAVESKEDKGIKSGLSFAA--LQEEEDDGADVSA 197
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L L P ++ I ++ F PT +QKACIP G+D+IG A TGSGKTLAFG+PI++
Sbjct: 198 WESLGLSPEILAGISKMKFTTPTSVQKACIPPIL-DGRDVIGKASTGSGKTLAFGIPILE 256
Query: 235 RLLEE-REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGIN 290
LE+ R K +K E + P AL+++PTRELA Q+ H+ EV A G+N
Sbjct: 257 YYLEKLRSKT-----QKDSEKTETTPI----ALVLSPTRELAHQLAKHIGEVVSHAPGVN 307
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
R+ + GG+S +KQ+R+L ++V+GTPGR+WE++S G + ++ + F V+DEADR
Sbjct: 308 ARIALLTGGLSLQKQQRVL-TNADIVIGTPGRVWEVLSSGHGLIRKMQAIKFLVIDEADR 366
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIALSAD 409
++ GHF+E I+ L +G+ + + L K RQTLVFSAT D
Sbjct: 367 LLSEGHFKEAHEILAALDRV---VDGEFPDESSDESDDELDPKSGRQTLVFSAT--FHRD 421
Query: 410 FRKKLK-HGSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 465
++KL G ++ S+E L ++ R +D+ VS +A L+E +E
Sbjct: 422 LQQKLAGKGKWTGGDIMSQKESMEYLLQKLNFREEKPRFIDVNPVSQMAENLKEGIVE 479
>gi|307190840|gb|EFN74688.1| ATP-dependent RNA helicase DDX24 [Camponotus floridanus]
Length = 739
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 177/335 (52%), Gaps = 64/335 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
+AW+ + + ++K++ F PT IQ +PAA +DI+GAAETGSGKTLAFG+P
Sbjct: 134 VEAWSSMGVPTSIIKALADQNFHSPTAIQAQTLPAAILGRRDILGAAETGSGKTLAFGIP 193
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGH----------------------------- 262
I++ +L +++ +M EE+ K+ KG
Sbjct: 194 IIKGILHLKKQQLEM--SMSEESTKHKNKGSSSEIEARENEDISESENCVHVVNNIKLDN 251
Query: 263 --------LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPE 314
L ALI+TPTRELA+Q+ +HL + AK ++++ ++GGM+ KQER+L PE
Sbjct: 252 CQNISIKPLYALILTPTRELAIQIKNHLTQAAKYTDIKIAVVLGGMAAVKQERILSKGPE 311
Query: 315 LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 374
+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+EL D+L N
Sbjct: 312 IVIATPGRLWELIQDGNSHLNQIDSIRYLAIDETDRMMEKGHFQEL---YDLLEKMNA-- 366
Query: 375 EGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF-----RKKLKHGSLKLKQSVNGLN 429
+ ++ +KRQT VFSAT+ + D RKK ++ K+ + G
Sbjct: 367 -------------NPVKLEKRQTFVFSATLTMVHDIPDYLERKKKRYARSKIYKLTPG-Q 412
Query: 430 SIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
++ + ++ N +VDLT S +A+ L E I
Sbjct: 413 KLQKIIHLLKIK-NPKVVDLTKESGMADNLTECRI 446
>gi|443706484|gb|ELU02510.1| hypothetical protein CAPTEDRAFT_152919 [Capitella teleta]
Length = 608
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 170/328 (51%), Gaps = 53/328 (16%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
AW L + +M ++ F +PTPIQ +PAA +DI+GAA TGSGKTLAF +P
Sbjct: 1 MSAWMNLFVPEKVMLALGEQNFVQPTPIQIESLPAAIRDRRDIVGAAHTGSGKTLAFAIP 60
Query: 232 IMQRLLEEREKAGKMLEEK-------------------------GEEAEKYAPKGH---- 262
I+ +++ +E A L ++ G+E + +
Sbjct: 61 ILNGIMKLKEAAENELNQQLDGEEENEDDEILDEEEPEESAESDGDEEVEEKAEAESSEE 120
Query: 263 ---LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGT 319
L ALI+TPTRELA+QV +H++ AK + + +VGGMS +KQERLL+ PE+VV T
Sbjct: 121 TKPLYALILTPTRELAIQVKNHIEAAAKYTGITCMAVVGGMSVQKQERLLRRGPEIVVAT 180
Query: 320 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE 379
PGRLWEL S HL ++ + F VLDEADRM+E GHF EL+ I+ + ++ NE
Sbjct: 181 PGRLWELYSELSNHLSKMPKIRFLVLDEADRMVEKGHFEELEKILGTIN-SDAENE---- 235
Query: 380 QTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLN---SIETLSE 436
K+RQT VFSAT+ + ++L K K V L+ +E L
Sbjct: 236 -------------KRRQTFVFSATLTYTHKAPERLFMQKKKKKLKVTELSIEKKLEVLMG 282
Query: 437 RAGMRANVAIVDLTNVSVLANKLEESFI 464
+ GMR I+DLT A L E+ I
Sbjct: 283 QVGMRERPKIIDLTEKQRTAETLTEARI 310
>gi|156550634|ref|XP_001604682.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Nasonia
vitripennis]
Length = 636
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 180/353 (50%), Gaps = 76/353 (21%)
Query: 168 ISTEFD-AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
+STE + W+ L + ++ +++ F PT IQ +P A +DI+GAAETGSGKTL
Sbjct: 2 VSTEHNEGWSTLGVPSVITEALVEQNFYSPTAIQALALPPAILGRRDILGAAETGSGKTL 61
Query: 227 AFGLPIMQRLLEEREKAGKMLEE------------------------------------- 249
AFG+P++ +LE ++K GK ++
Sbjct: 62 AFGIPVLNGILELQKKEGKTVQSTSGKFREVNKDEEAASDISDNEGDENDEPMPEEQSID 121
Query: 250 -------------KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
K +E + P L ALI+TPTRELA+Q+ DHL + AK ++++ +
Sbjct: 122 KNGIGLVKVVNNVKFDEFDNVKPTKPLYALILTPTRELAIQIKDHLTKAAKYTDIKIAVV 181
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
VGGM+ KQER+L PE+V+ TPGRLWEL+ G HL +L ++ + V+DE DRM+E GH
Sbjct: 182 VGGMAAVKQERILSKGPEIVIATPGRLWELIDEGNPHLSQLPSVKYLVIDETDRMLEKGH 241
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF-----R 411
F EL II+ + N +S + K+RQT VFSAT+ L D R
Sbjct: 242 FLELHDIIERI------NSVES------------KVKRRQTFVFSATLTLVHDIPDYLQR 283
Query: 412 KKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
KK+++ K+ + G ++ + + ++ N I+D+T + A L E I
Sbjct: 284 KKIRNSKSKIFKLTPG-QKLQKVIDMLKVK-NPKIIDVTKDTGTARNLTECRI 334
>gi|295658672|ref|XP_002789896.1| ATP-dependent RNA helicase MAK5 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282857|gb|EEH38423.1| ATP-dependent RNA helicase MAK5 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 771
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/354 (36%), Positives = 190/354 (53%), Gaps = 41/354 (11%)
Query: 125 LKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLL 184
LK KGK KK ++ S N DD E+ VS AW L + L
Sbjct: 155 LKEAKGKNNKKHAPSTDVQP-GMSFDALNEEDDQEDVDVS---------AWEPLGISAEL 204
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 244
S+ +L F +PTPIQ ACIP A G D++G A TGSGKTLAFG+PI++ LE
Sbjct: 205 QTSLAKLKFAKPTPIQSACIPEIA-AGHDVVGKASTGSGKTLAFGIPILEYHLENNRD-- 261
Query: 245 KMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGINVRVVPIVGGMS 301
+ ++ G ++ + P ALI++PTRELA Q++ HL A IN R+ + GG+S
Sbjct: 262 EPIQSTGSDSSRKNPI----ALILSPTRELAHQISKHLTAFISNAPNINARIALLTGGLS 317
Query: 302 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 361
+KQ RLL A ++V+GTPGRLW+++S G+ + + ++ F V+DEADR++ GHF+E++
Sbjct: 318 VQKQHRLL-ANADIVIGTPGRLWDVISNGQGLIRKFQSIKFLVVDEADRLLSEGHFKEVE 376
Query: 362 SIIDMLP---MTNGSNEGQSE-QTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG 417
I+ L + +G E S+ +++ T S L RQTLVFSAT F + L+
Sbjct: 377 EILTSLDRKEINDGVEEPDSDSESERDNTKSFL----RQTLVFSAT------FHRSLQQK 426
Query: 418 SLKLKQSVNG-----LNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
+ V+G S+E L E+ R +D+ VS +A + E +E
Sbjct: 427 LAGKSRFVDGGLLDNKQSMEYLLEKLNFREEKPKFIDVNPVSQMAENIREGLVE 480
>gi|453089379|gb|EMF17419.1| DEAD-domain-containing protein, partial [Mycosphaerella populorum
SO2202]
Length = 687
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/321 (37%), Positives = 177/321 (55%), Gaps = 32/321 (9%)
Query: 158 AEEELVSEAE-ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIG 216
A LV E+E + WN L+L P M S+ +L F +PTPIQ+ IP G D+IG
Sbjct: 163 AFSRLVEESEDTGVDVSQWNPLKLSPDTMASLSKLRFTKPTPIQQHVIPEVL-AGHDVIG 221
Query: 217 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELAL 276
A TGSGKTLAFG+PI++R LE ++ +KG+ G L AL+++PTRELA
Sbjct: 222 KASTGSGKTLAFGIPILERFLESSQQ-----RKKGKSGS-----GPL-ALLLSPTRELAH 270
Query: 277 QVTDHLKEVAKGINV---RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 333
Q+ HL + G++ + + GG+S +KQ+R+LK ++V+GTPGRLWE++ G
Sbjct: 271 QLDKHLTALFSGLSTDRPSIATLTGGLSLQKQQRMLK-DADVVIGTPGRLWEVIGDGHGV 329
Query: 334 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTV------ 387
L + F V+DEADR++ GHF+E++ I++ L +E S++T+ T
Sbjct: 330 AASLKHIDFLVIDEADRLLSEGHFKEVEEILNALDRDEAQDE--SDETENATTPRTTKSQ 387
Query: 388 SSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVA 445
+S + KRQTLVFSAT AL KL H L + S+E L + R
Sbjct: 388 ASSRPAKRQTLVFSATFDRALQRKLVGKLSHRDNLLSNA----QSMEYLLSKLNFREETP 443
Query: 446 -IVDLTNVSVLANKLEESFIE 465
+D+ ++ LA L+E IE
Sbjct: 444 KFIDMNPINQLATGLKEGLIE 464
>gi|322693567|gb|EFY85423.1| ATP-dependent RNA helicase MAK5 [Metarhizium acridum CQMa 102]
Length = 794
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 210/386 (54%), Gaps = 28/386 (7%)
Query: 97 RSSANEEDPGDGDGDEDGNGVQKE-----QEKNLKNQKGKKK-----KKKKKGKKIKTVE 146
R + + GD +G Q+E Q K K QKG+++ +KK K +K+ +
Sbjct: 122 REPVDSGEAGDSQDGLEGENSQEEISAVKQGKTSKLQKGRQQSDNGTQKKSKKQKMGDKK 181
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA-----WNELRLHPLLMKSIYRLGFKEPTPIQK 201
+ S+G + L + A+ E D W L L P L+ +I +LGF +PT IQ+
Sbjct: 182 LQKSASHGTGNEFLALAAMADEEAENDDLDMGDWVALNLSPNLVSAIAKLGFSKPTAIQE 241
Query: 202 ACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG 261
IP G D+IG A+TGSGKTLAFG+PI+++ LE RE+ ++G++ +K +G
Sbjct: 242 KSIPEII-AGGDVIGKAQTGSGKTLAFGIPIVEKWLEMREEQEDQGGDRGDQPKKKNGEG 300
Query: 262 HLRALIITPTRELALQVTDHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGT 319
+ A+I++PTRELA Q+ +H+K V G+ + + + GG+S +KQ+R L+ ++V+GT
Sbjct: 301 PM-AVILSPTRELAKQIGEHIKAVCDGLPASPYICVVTGGLSIQKQQRQLE-EADIVIGT 358
Query: 320 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE 379
PGRLWE++ G K + + F V+DEADR+ + G F+E ++II L N G S+
Sbjct: 359 PGRLWEVLDGDAKLQEQFTRIKFLVVDEADRLFKVGQFKEAENIIGALDRENPEGHGYSD 418
Query: 380 QTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAG 439
+ S + ++RQTLVFSAT + + KL G K ++ + + L +
Sbjct: 419 NSD-----SEDETRERQTLVFSAT--FDKNLQTKLA-GKGKSAKAGSDEEKMAYLMKCLK 470
Query: 440 MRANVAIVDLTNVSVLANKLEESFIE 465
R +D+ VS +A+ L E IE
Sbjct: 471 FRGEPKFIDVNPVSQMADNLREVLIE 496
>gi|380015023|ref|XP_003691511.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX24-like [Apis florea]
Length = 778
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 177/352 (50%), Gaps = 83/352 (23%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L + ++K++ F +PTPIQ +PAA +DI+GAAETGSGKTLAFG+PI+
Sbjct: 146 WQILGVSTPIIKALKDQQFYQPTPIQALTLPAAILGHRDILGAAETGSGKTLAFGIPIIN 205
Query: 235 RLLE-------------EREKAGKMLEEKG------------------------------ 251
+LE E+EK K++E KG
Sbjct: 206 GILELKNKQCDQLNVKSEKEK-NKIIENKGWICSENKIVEIDNSSSESDYEEDIDSVNEN 264
Query: 252 ---------------EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
E Y K L ALI+TPTRELA+Q+ DHL + AK +++++ +
Sbjct: 265 SIGCVRVINNIKFNETNTENYMEKP-LYALILTPTRELAIQIKDHLTKAAKYVDIKIAVV 323
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
+GGM+ KQER+L PE+V+ TPGRLWEL+ G HL ++ ++ + V+DE DRM+E GH
Sbjct: 324 LGGMAAVKQERILSKGPEIVIATPGRLWELIQYGNSHLCKVDSIKYLVIDETDRMLEKGH 383
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 416
F+ELQ +++ + +NE + ++RQT VFSAT+ + D + L
Sbjct: 384 FQELQQLLEKI----NTNEK--------------RLRERQTFVFSATLTMVHDIPEYLXK 425
Query: 417 GSLKLKQSVNGL----NSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
K +S +E + E G++ N I+DLT S + L E I
Sbjct: 426 KKRKHIKSKIKKLTPDQKLEKIMELVGIK-NPKIIDLTKKSGITANLTECRI 476
>gi|440638151|gb|ELR08070.1| hypothetical protein GMDG_02897 [Geomyces destructans 20631-21]
Length = 741
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 178/312 (57%), Gaps = 41/312 (13%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDII 215
D+AE+E ++E W EL L ++ ++ ++GF PTPIQ+ IP G D+I
Sbjct: 205 DEAEDEDMTE---------WAELNLSTAMLSALAKIGFTTPTPIQQEAIPEVL-SGNDVI 254
Query: 216 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 275
G A TGSGKTLAFG+PI++R L++ E + E A + + ALI++PTRELA
Sbjct: 255 GKASTGSGKTLAFGIPIIERWLQDNEG------REDETATEKKTQKSATALILSPTRELA 308
Query: 276 LQVTDHLKEVAKGINVR--VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 333
Q+TDHL ++ KG++ + + GG++ +KQ+R L AR ++++GTPGRLWE++S G +
Sbjct: 309 HQLTDHLTKLCKGLSDAPFIATVTGGLAIQKQQRQL-ARADIIIGTPGRLWEVLSSGIEL 367
Query: 334 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 393
L TL F V+DEADR++ GHF+E + II L + +E + T
Sbjct: 368 SKSLKTLKFLVVDEADRLLTEGHFKEAEEIISKLDRHDADDEEEHVVT------------ 415
Query: 394 KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVS 453
RQTLVFSAT+A ++KL G +L G + +E L ++ + +D+ S
Sbjct: 416 -RQTLVFSATLA--KGLQQKLS-GKGRL-----GDDGMEYLMKKLKFKGEPKFIDVAT-S 465
Query: 454 VLANKLEESFIE 465
+A L+E IE
Sbjct: 466 AMAEGLKEGVIE 477
>gi|299742573|ref|XP_001832577.2| ATP-dependent RNA helicase MAK5 [Coprinopsis cinerea okayama7#130]
gi|298405246|gb|EAU89326.2| ATP-dependent RNA helicase MAK5 [Coprinopsis cinerea okayama7#130]
Length = 759
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 165/302 (54%), Gaps = 61/302 (20%)
Query: 155 PD-DAEEELVSEAEISTEFDA------WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA 207
PD D++E SE E FD+ W+ L LHP L +SI+ F +PT IQK IP A
Sbjct: 128 PDEDSDESADSEPE-KEPFDSETLLPEWHPLGLHPRLTRSIHARNFSKPTEIQKEAIPLA 186
Query: 208 AHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALI 267
QG+D++G A+TGSGKTLA+GLPI+ LL ++ + K + LRALI
Sbjct: 187 L-QGRDVVGVAQTGSGKTLAYGLPILHTLLNQKRPSSKR-------------RRPLRALI 232
Query: 268 ITPTRELALQVTDHLKEVAKGI------------------NVRVVPIVGGMSTEKQERLL 309
+ PTRELALQV+ HL + + I +V V IVGGMS +KQ+R+L
Sbjct: 233 LAPTRELALQVSQHLTDTLRAIEPQEDEGDEKKQAVKPPPHVSVAAIVGGMSAQKQKRVL 292
Query: 310 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII----- 364
++++ TPGRLW+++S + E+ L F VLDEADRMIE GHF EL +I+
Sbjct: 293 DRGVDVLIATPGRLWDIVSTDDNLANEIRNLRFLVLDEADRMIETGHFAELDNILRLTLR 352
Query: 365 ----DMLPMTNGSNEGQSEQTQTCVT------VSSLQR-KKRQTLVFSATIALSADFRKK 413
D +P G + +SE T + SS Q+ QT VFSAT LS D ++
Sbjct: 353 ESSEDEIP---GIDNEKSEDEDTNMDDKADDKPSSAQKGTDLQTFVFSAT--LSKDLQRN 407
Query: 414 LK 415
LK
Sbjct: 408 LK 409
>gi|225679099|gb|EEH17383.1| ATP-dependent RNA helicase mak5 [Paracoccidioides brasiliensis
Pb03]
Length = 772
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 146/450 (32%), Positives = 225/450 (50%), Gaps = 67/450 (14%)
Query: 62 GFLSLEEIDEASYNLQIPKPE-----KGKPGKKTNTKKRKRS-SANEEDPGD-------- 107
GF LEEI+ + I +P K K K K RS S+N ED D
Sbjct: 53 GFFGLEEIE----GVDIVRPAGQGQIKFKAAKNKVKKIADRSISSNAEDEADEWSRFSDS 108
Query: 108 -GDG-------DEDGNGVQKEQEKNLK-------------NQKGKKKKKKKKGKKIKTVE 146
G G +++G +QK++ + K +K + K K+ KGK K
Sbjct: 109 AGPGQDVEYVYNDEGKQIQKDETREKKKVKKSNKDRADEPREKKRLKLKEAKGKNNKKHA 168
Query: 147 ESVTVSNGP--DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACI 204
V G D EE + + + AW L + L S+ +L F +PTPIQ ACI
Sbjct: 169 PRTDVQPGMSFDSLNEE---DDQEDVDVSAWEPLGISAELQTSLAKLKFAKPTPIQSACI 225
Query: 205 PAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLR 264
P A G D++G A TGSGKTLAFG+PI++ LE + ++ G ++ + P
Sbjct: 226 PVIA-AGHDVVGKAPTGSGKTLAFGIPILEYHLENNRD--EPIQNTGSDSSRKHPI---- 278
Query: 265 ALIITPTRELALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPG 321
ALI++PTRELA Q++ HL A IN R+ + GG+S +KQ RLL A ++V+GTPG
Sbjct: 279 ALILSPTRELAHQISKHLTAFISNAPNINARIALLTGGLSVQKQHRLL-ANADIVIGTPG 337
Query: 322 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT 381
RLW+++S G+ + + ++ F V+DEADR++ GHF+E++ I+ L ++ + +
Sbjct: 338 RLWDVISNGQGLIRKFQSIKFLVVDEADRLLSEGHFKEVEEILTALDRKEINDGVEESDS 397
Query: 382 QTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-----LNSIETLSE 436
+ ++++ RQTLVFSAT F + L+ + ++G S+E L E
Sbjct: 398 DSESERANIKSFPRQTLVFSAT------FHRGLQQKLAGKSRFIDGGLLDNKQSMEYLLE 451
Query: 437 RAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
+ R +D+ VS +A L+E +E
Sbjct: 452 KLNFREEKPKFIDVNPVSQMAENLKEGLVE 481
>gi|393907272|gb|EFO18351.2| hypothetical protein LOAG_10144 [Loa loa]
Length = 698
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 136/239 (56%), Gaps = 33/239 (13%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ W L + ++K+I +GF EP IQ+ IP+A DIIGAAETGSGKTLAFG+
Sbjct: 133 DMSGWINLYISNTVLKAIADMGFTEPMEIQRLVIPSAIRDRFDIIGAAETGSGKTLAFGV 192
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
P+++RLL A + E E+ K +RALI+ PTREL +Q+ +H+ + K +
Sbjct: 193 PVVERLL-----ANQSFAESSEQ------KKSIRALILAPTRELVMQIRNHIHALLKYTS 241
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH--LVELHTLSFFVLDEA 348
+V IVGG+S +KQER+LK PE+V+ TPGRL LM+ E L + L V+DE
Sbjct: 242 FKVASIVGGLSLQKQERILKYVPEIVIATPGRLLALMTSAEADSCLSDWSNLQCLVVDET 301
Query: 349 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
DRMIE GHF +LQ I+D++ KK QT VFSAT+ +
Sbjct: 302 DRMIEKGHFEDLQHILDIIRKNTS--------------------KKLQTFVFSATLTYT 340
>gi|312088074|ref|XP_003145719.1| hypothetical protein LOAG_10144 [Loa loa]
Length = 699
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 136/239 (56%), Gaps = 33/239 (13%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ W L + ++K+I +GF EP IQ+ IP+A DIIGAAETGSGKTLAFG+
Sbjct: 134 DMSGWINLYISNTVLKAIADMGFTEPMEIQRLVIPSAIRDRFDIIGAAETGSGKTLAFGV 193
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
P+++RLL A + E E+ K +RALI+ PTREL +Q+ +H+ + K +
Sbjct: 194 PVVERLL-----ANQSFAESSEQ------KKSIRALILAPTRELVMQIRNHIHALLKYTS 242
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH--LVELHTLSFFVLDEA 348
+V IVGG+S +KQER+LK PE+V+ TPGRL LM+ E L + L V+DE
Sbjct: 243 FKVASIVGGLSLQKQERILKYVPEIVIATPGRLLALMTSAEADSCLSDWSNLQCLVVDET 302
Query: 349 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
DRMIE GHF +LQ I+D++ KK QT VFSAT+ +
Sbjct: 303 DRMIEKGHFEDLQHILDIIRKNTS--------------------KKLQTFVFSATLTYT 341
>gi|238501664|ref|XP_002382066.1| ATP dependent RNA helicase, putative [Aspergillus flavus NRRL3357]
gi|220692303|gb|EED48650.1| ATP dependent RNA helicase, putative [Aspergillus flavus NRRL3357]
Length = 769
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 234/476 (49%), Gaps = 72/476 (15%)
Query: 40 SSFSAADNDPFAFLVGSNELD-------------GGFLSLEEIDEASYNLQIPKPE---- 82
S +A D+D + +VG NEL+ GGF LEEI+ + I + E
Sbjct: 26 SDATAEDSD-WDGIVGMNELNWKEVALPDRLEDAGGFFGLEEIE----GVDIIRSEGNGE 80
Query: 83 ---KGKPGKKTNTKKR----KRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKK 135
K K GK + + + ++ +D +G GD+D V +E+ K +++ + KK
Sbjct: 81 IKFKAKAGKPKKSILKKKEPEETNTQSDDEWEGFGDDD-QAVSQEESKETQDEPNESDKK 139
Query: 136 KK-------------------KGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWN 176
K K +K K VE + L E + + AW
Sbjct: 140 AKVKESKNAKKEKKKNAKDARKEQKEKAVESKKDKGIKSGLSFAALQEEEDDGADVSAWE 199
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL 236
L L P ++ I ++ F PT +QKACIP G+D+IG A TGSGKTLAFG+PI++
Sbjct: 200 SLGLSPEILAGISKMKFTTPTSVQKACIPPIL-DGRDVIGKASTGSGKTLAFGIPILEYY 258
Query: 237 LEE-REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGINVR 292
LE+ R K +K E + P AL+++PTRELA Q+ H+ EV A G+N R
Sbjct: 259 LEKLRSKT-----QKDSEKTETTPI----ALVLSPTRELAHQLAKHIGEVVSHAPGVNAR 309
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+ + GG+S +KQ+R+L ++V+GTPGR+WE++S G + ++ + F V+DEADR++
Sbjct: 310 IALLTGGLSLQKQQRVL-TNADIVIGTPGRVWEVLSSGHGLIRKMQAIKFLVIDEADRLL 368
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIALSADFR 411
GHF+E I+ L +G+ + + L K RQTLVFSAT D +
Sbjct: 369 SEGHFKEAHEILAALDRV---VDGEFPDESSDESDDELDPKSGRQTLVFSAT--FHRDLQ 423
Query: 412 KKLK-HGSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 465
+KL G ++ S+E L ++ R +D+ VS +A L+E +E
Sbjct: 424 QKLAGKGKWTGGDIMSQKESMEYLLQKLNFREEKPRFIDVNPVSQMAENLKEGIVE 479
>gi|340938992|gb|EGS19614.1| hypothetical protein CTHT_0040930 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 767
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/304 (38%), Positives = 173/304 (56%), Gaps = 31/304 (10%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
E + W L L P ++ I RL F +PTPIQ IP + G D+IG A TGSGKTL
Sbjct: 191 EDDVDLSEWVPLGLSPPVLSCIARLKFLKPTPIQARAIPEVIN-GHDVIGKAATGSGKTL 249
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 286
AFG+PI++ L + A E G++ H ALI++PTRELA Q+TDHLK++
Sbjct: 250 AFGIPIVEAWLSKIASA----ESSGQK--------HPIALILSPTRELAHQITDHLKQLC 297
Query: 287 KGINV--RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
G+ + + GG++ +KQER L+ + ++VVGTPGRLWE+MS + ++SF V
Sbjct: 298 AGLATAPYICSVTGGLAVQKQERQLQ-KADIVVGTPGRLWEVMSTSNAVMQSFRSISFLV 356
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+DEADR++++GHF+E + I+ L T G+ E+ + +S R++RQTLVFSAT
Sbjct: 357 VDEADRILKDGHFKEAEKILLALDRT---VPGEEEENDSDDEKTS--RRRRQTLVFSAT- 410
Query: 405 ALSADFRKKLKHGSLKLKQSVNGLN---SIETLSERAGMRANVAIVDLTNVSVLANKLEE 461
F K L+ L K N + S+E L +R R + +D ++ +A L+E
Sbjct: 411 -----FNKALQQ-KLAGKARYNLMGETESLEYLLKRLNFREHPKFIDTNPITQMAENLKE 464
Query: 462 SFIE 465
I+
Sbjct: 465 GLIQ 468
>gi|340717162|ref|XP_003397056.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX24-like [Bombus terrestris]
Length = 766
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 201/406 (49%), Gaps = 87/406 (21%)
Query: 126 KNQKGKKKKKKKKGKKIKTVEESVTVSNG----PDDAEE---ELVSEAEISTEFDA--WN 176
K +K K +KK +G+K K + + ++ NG P++ ++ E + + DA W
Sbjct: 87 KAKKTKSLEKKLEGRKAKKIPKCLSPKNGLDISPNNNDQFSNECNKDKNDVYDIDAQQWY 146
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL 236
L + ++K++ F EPTPIQ +P A +DI+GAAETGSGKTLAFG+PI+ +
Sbjct: 147 MLGVPTPVIKALKDQQFHEPTPIQALTLPPAILGHRDILGAAETGSGKTLAFGIPIINGI 206
Query: 237 LEEREKAG-------------------------KMLEEKGEEAEKYAPK----------G 261
LE + K KM+E +E + G
Sbjct: 207 LELKNKQSQQSDMEFGEEITGIIKNKGWICSENKMVENDNSSSESDYEEHIEGLNKNGIG 266
Query: 262 HLRAL------------------IITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTE 303
+R + I+TPTRELA+Q+ DHL + K +++V ++GGM+
Sbjct: 267 CVRVINNVKMSKTQNYTKPLYALILTPTRELAIQIKDHLTKAIKYTDIKVAVVLGGMAAV 326
Query: 304 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 363
KQER+L PE+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+ELQ +
Sbjct: 327 KQERILSKGPEIVIATPGRLWELIQQGNPHLSKVDSIKYLAIDETDRMLEKGHFQELQQL 386
Query: 364 IDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF-----RKKLKHGS 418
++ + M NE + E+ RQT VFSAT+ + D + K KH
Sbjct: 387 LEKINM----NEKKVEE--------------RQTFVFSATLTMVHDIPEYLEKXKRKHTK 428
Query: 419 LKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
K+ Q + ++ + E G++ N I+D+T S A L E I
Sbjct: 429 SKI-QKLTPAQKLQKIMELVGIK-NPKIIDVTKKSGTATNLTECRI 472
>gi|383856439|ref|XP_003703716.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Megachile
rotundata]
Length = 770
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 174/349 (49%), Gaps = 80/349 (22%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L L+ ++K++ F PTPIQ +P A +DI+GAAETGSGKTLAFG+PI+
Sbjct: 146 WGRLGLYAPIIKAMKDQQFHTPTPIQALTLPPAIMGYRDILGAAETGSGKTLAFGIPIIN 205
Query: 235 RLLEEREK------------AGKMLEEKG------------------------------- 251
+LE + + G +E KG
Sbjct: 206 GILELKNRQVDKSDIKPINGTGNNIENKGWICSDNEMKDDDSSSETDHEEDIDDVNENNI 265
Query: 252 -----------EEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGM 300
E E Y K L ALI+TPTRELA+Q+ DHL + AK ++++ ++GG+
Sbjct: 266 GCIRVIDKVKINEDEHYVKKP-LYALILTPTRELAIQIKDHLTKAAKYTDIKIAVLLGGL 324
Query: 301 STEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 360
+ KQER+L PE+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+EL
Sbjct: 325 AAVKQERILSKGPEIVIATPGRLWELIQQGNPHLNQVDSIKYLAIDETDRMLEKGHFQEL 384
Query: 361 QSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK----- 415
Q +++ + ++ +R++RQ VFSAT+ + D L+
Sbjct: 385 QQLLEK------------------ININKKKREERQNFVFSATLTMVHDIPDYLQKKKKK 426
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H S K+ + G ++ + + GM+ +VD+T S A+ L E I
Sbjct: 427 HNSSKIFKLTPG-QKLQKIIQLVGMKTP-KVVDVTRESGTASNLTECKI 473
>gi|296813881|ref|XP_002847278.1| ATP-dependent RNA helicase MAK5 [Arthroderma otae CBS 113480]
gi|238842534|gb|EEQ32196.1| ATP-dependent RNA helicase MAK5 [Arthroderma otae CBS 113480]
Length = 749
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 172/302 (56%), Gaps = 31/302 (10%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AW+ L L P L S+ RL F +PTPIQ A IP G+D+IG A TGSGKTLAFGLPI+
Sbjct: 174 AWDGLDLRPELQTSLSRLKFSKPTPIQTAAIPDIL-AGRDVIGKAATGSGKTLAFGLPIL 232
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGIN 290
Q LL K G+ + + +K ALI++PTRELA Q+ HLKEV A ++
Sbjct: 233 QYLLNNNNKHGQGGIKSSSKEKKPI------ALILSPTRELAHQLVKHLKEVTSSAPNVD 286
Query: 291 VRVVPIVGGMSTEKQER-LLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
+ + GG+S KQ+R LL A +++VGTPGRLW+++S K L +L + F V+DEAD
Sbjct: 287 AYIASVTGGLSMHKQQRQLLDA--DIIVGTPGRLWDMVSSTPKILTKLRGIKFLVVDEAD 344
Query: 350 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
R++ GHF+EL ++ L S++ + + V +RQTLVFSAT
Sbjct: 345 RLLSEGHFKELGELLSALDKAKTSDDVHGNEDEEDEPV------ERQTLVFSAT------ 392
Query: 410 FRKKLKHGSLKLKQSV--NGLN---SIETLSERAGMRANVA-IVDLTNVSVLANKLEESF 463
F+K L+ K +S N L+ S+E L ++ + VD+ VS +A+ L+E
Sbjct: 393 FQKGLQQKLAKRDKSFHDNLLDKKESMEYLLKKLNFKDEKPRFVDVNPVSQMADNLKEGI 452
Query: 464 IE 465
IE
Sbjct: 453 IE 454
>gi|339238663|ref|XP_003380886.1| ATP-dependent RNA helicase DDX24 [Trichinella spiralis]
gi|316976157|gb|EFV59493.1| ATP-dependent RNA helicase DDX24 [Trichinella spiralis]
Length = 654
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 177/345 (51%), Gaps = 44/345 (12%)
Query: 125 LKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEE-ELVSEAEIS-TEFDAWNELRLHP 182
+ ++K KK+K K K+ + + + S E E V E + + W EL +
Sbjct: 44 INDKKNTSKKRKLKNKQSRAIIDKQEASGKKSKLESFESVDENYVPGKKLKKWQELFVPE 103
Query: 183 LLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREK 242
++ ++ L + EPTPIQ C+P A DI+GAAETGSGKTLAFG+P++ LL E
Sbjct: 104 EILHALDDLEYFEPTPIQALCLPPAIRDRLDILGAAETGSGKTLAFGIPVIAGLLSENSD 163
Query: 243 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMST 302
+ + H ALI+TPTRELA+Q+ DHL + K N+++ GG+S
Sbjct: 164 S----------------QIHPSALILTPTRELAIQIKDHLSSIMKYTNLKLTTATGGLSV 207
Query: 303 EKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 362
+KQ+RLLK P++V+ TPGRLW L+S + L LH + + V+DE DRM E +F E
Sbjct: 208 QKQQRLLKDDPDIVIATPGRLWALISEDCEGLENLHKIKYLVIDEIDRMAEKQNFAEFSQ 267
Query: 363 IIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLK 422
+++ L NG +KRQTLVFSAT++ +L K
Sbjct: 268 LLEFL---NGDENAI---------------RKRQTLVFSATLSFVHPMPNRLLS-----K 304
Query: 423 QSVNGLN---SIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
+ L+ IE L MR ++DL++ L++ L ES +
Sbjct: 305 ANAKPLSPEEKIENLISFLSMRPKRKVIDLSSKHGLSSSLVESCL 349
>gi|258575119|ref|XP_002541741.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902007|gb|EEP76408.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 777
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 171/315 (54%), Gaps = 24/315 (7%)
Query: 162 LVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETG 221
L E E T+ AW+ L L L S+ RL F PTPIQ ACIPA QG D+IG A TG
Sbjct: 176 LQDEVEEDTDVSAWDPLGLRAELQTSLARLKFCSPTPIQSACIPAVL-QGHDVIGKASTG 234
Query: 222 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEK-YAPKGHLRALIITPTRELALQVTD 280
SGKTLAFG+PI++ L R G+ E+ AP ALI++PTRELA Q+
Sbjct: 235 SGKTLAFGIPIVEHYLG-RYPTGQAPASSNEDGTSGKAPI----ALILSPTRELAHQLNK 289
Query: 281 HLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 337
HL ++ A + R+ + GG+S KQ+RLL A ++++ TPGRLWE++ L +L
Sbjct: 290 HLTDLISNAPHTSARIASVTGGLSIYKQQRLL-ADADIIIATPGRLWEVIGSMPGFLTKL 348
Query: 338 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEG-QSEQTQTCVTVSSLQRKKRQ 396
+ F V+DEADR++ GHF+E + I++ L + EG + ++++RQ
Sbjct: 349 KRIKFLVIDEADRLLSEGHFKEAEEIVNALDRVEKTEEGYEEGSEPGSPEEEEEEQRQRQ 408
Query: 397 TLVFSATIALSADFRKKLKH---GSLKLKQS--VNGLNSIETLSERAGMR-ANVAIVDLT 450
TLVFSAT F K L+ G ++ + ++ S+E L + R +D+
Sbjct: 409 TLVFSAT------FHKGLQQKLSGKIRYRNDDLLDKKESMEYLLRKLNFREERPKFIDVN 462
Query: 451 NVSVLANKLEESFIE 465
+S +A L+E ++
Sbjct: 463 PISQMAENLKEGLVQ 477
>gi|121699618|ref|XP_001268081.1| ATP dependent RNA helicase, putative [Aspergillus clavatus NRRL 1]
gi|143345189|sp|A1CTL8.1|MAK5_ASPCL RecName: Full=ATP-dependent RNA helicase mak5
gi|119396223|gb|EAW06655.1| ATP dependent RNA helicase, putative [Aspergillus clavatus NRRL 1]
Length = 774
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 175/308 (56%), Gaps = 18/308 (5%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
+E + + AW+ L L L+ I ++ F PT +Q ACIP G D++G A TGSG
Sbjct: 189 AEEDDGVDVSAWDALNLSTELLTGISKMKFTSPTAVQAACIPHIL-DGHDVVGKASTGSG 247
Query: 224 KTLAFGLPIMQRLLEE-REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 282
KTLAFG+PI++ LE+ R+ G ++ +K + + P ALI++PTRELA Q+ H+
Sbjct: 248 KTLAFGIPILEHYLEKNRDGHGDIIGKK--DKKDSTPI----ALILSPTRELAHQLAKHI 301
Query: 283 KEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT 339
E+ A G+N R+ + GG+S +KQ+RLL A ++V+GTPGR+WE+MS G+ + ++
Sbjct: 302 GELVTQAPGVNARIALLTGGLSVQKQQRLL-AGADIVIGTPGRVWEIMSTGQGLIRKMQK 360
Query: 340 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 399
+ F V+DEADR++ GHF+E++ II L + ++ S R +RQTLV
Sbjct: 361 IKFLVVDEADRLLSEGHFKEVEEIIGALDRVEDGD--VLDEEDEAPEEESDPRSERQTLV 418
Query: 400 FSATIALSADFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLAN 457
FSAT D ++KL G +N S++ L ++ R +D VS +A
Sbjct: 419 FSAT--FHRDLQQKLAGKGKWTGGDIMNKKESMDYLLQKLNFREEKPKFIDTNPVSQMAE 476
Query: 458 KLEESFIE 465
L+E +E
Sbjct: 477 NLKEGIVE 484
>gi|145244675|ref|XP_001394643.1| ATP-dependent RNA helicase mak5 [Aspergillus niger CBS 513.88]
gi|143345221|sp|A2QWW0.1|MAK5_ASPNC RecName: Full=ATP-dependent RNA helicase mak5
gi|134079333|emb|CAK96962.1| unnamed protein product [Aspergillus niger]
gi|350631401|gb|EHA19772.1| hypothetical protein ASPNIDRAFT_178721 [Aspergillus niger ATCC
1015]
Length = 766
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 174/300 (58%), Gaps = 24/300 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AW L L P ++ S+ ++ F PT +QK+CIP G D+IG A TGSGKTLAFG+PI+
Sbjct: 193 AWESLGLSPEILTSLSKMKFTTPTLVQKSCIPQIL-DGHDVIGKASTGSGKTLAFGIPIL 251
Query: 234 QRLLEERE---KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA---K 287
+ LE+R +AGK EEK ++ AP ALI++PTRELA Q+ H+ E+A
Sbjct: 252 EHYLEKRRQDLRAGK--EEKKKDT---API----ALIMSPTRELAHQLAKHIGELALHAP 302
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
G N R+ + GG+S +KQ+R+L A ++V+GTPGR+WE++S G+ + ++ + F V+DE
Sbjct: 303 GSNARIALLTGGLSVQKQQRVL-AGADIVIGTPGRVWEVLSSGQGLIRKMSEIKFLVIDE 361
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADR++ GHF+E + I+ L N G E + R +RQTLVFSAT
Sbjct: 362 ADRLLSEGHFKEAEEILGALDRVEEGNFGGEESEDEEKEDA---RSERQTLVFSAT--FH 416
Query: 408 ADFRKKLKHGSLKLKQSV-NGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
D ++KL + + + S+E L ++ R +D+ VS +A L+E +E
Sbjct: 417 RDLQQKLAGKARWTGGDIMSNKESMEYLLQKLKFREEKPKFIDVNPVSQMAEGLKEGIVE 476
>gi|336388501|gb|EGO29645.1| ATP-dependent RNA helicase [Serpula lacrymans var. lacrymans S7.9]
Length = 754
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 193/388 (49%), Gaps = 76/388 (19%)
Query: 134 KKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEI---STEFDA------WNELRLHPLL 184
K KKGK +E S + P+D E + S ++ S FD+ W+ LHP L
Sbjct: 85 KTDKKGKH-DDIENS---PDTPEDIEAGIESTTDVPLSSISFDSKLLLPNWHSYSLHPHL 140
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEE-REKA 243
++ ++ GF PTPIQ +P A +G+DI+G AETGSGKTLA+GLPI+ LL R +
Sbjct: 141 LQILHHQGFTTPTPIQSKSLPKAM-EGRDIVGVAETGSGKTLAYGLPILHHLLSRSRHPS 199
Query: 244 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN------------- 290
K+ K ++AL++ PTRELALQV+DHL A+ I
Sbjct: 200 SKV-------------KRQVQALVLAPTRELALQVSDHLNMFARSIEAPIKEETLDVELS 246
Query: 291 ---------------------------VRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 323
V + IVGGMS +KQ R++ ++++ TPGRL
Sbjct: 247 ETQQLKDKSKGKNVVSGTAKTFSKPPLVSIAAIVGGMSAQKQRRIIDRGVDILIATPGRL 306
Query: 324 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN--EGQSEQT 381
W+++ + +L +L + +LDEADRM+ENGHF EL +I+ + + + E + E
Sbjct: 307 WDILEEDDSLAKQLASLRYLILDEADRMVENGHFAELDNILRLTLRLSREDVIEPEFETQ 366
Query: 382 QTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS---LKLKQSVNGLNSIETLSERA 438
T V + QT VFSAT LS D ++ LK G + K +++E L R
Sbjct: 367 DTEVQAHAETEDALQTFVFSAT--LSKDLQRDLKKGYRPRIGKKGRSKPASTLEDLVLRL 424
Query: 439 GMR-ANVAIVDLTNVSVLANKLEESFIE 465
R AN ++D++ + + L+ES IE
Sbjct: 425 DFRDANPEVIDISPEGGVVSGLQESKIE 452
>gi|170595141|ref|XP_001902262.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158590158|gb|EDP28893.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 668
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 152/283 (53%), Gaps = 37/283 (13%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ W L + ++K+I +GF EPT IQK IP+A DIIGAAETGSGKTLAFG+
Sbjct: 149 DMSGWINLYISNAVLKAIADMGFTEPTEIQKLVIPSAVRDRFDIIGAAETGSGKTLAFGV 208
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
P+++ LL A + E E+ K +RALI+ PTREL +Q+ +H+ + K
Sbjct: 209 PVVEHLL-----ANQSFLESSEQ------KKGIRALILAPTRELVMQIRNHIDALLKYTP 257
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH--LVELHTLSFFVLDEA 348
+V IVGG+S +KQER+LK PE+V+ TPGRL LM+ E L + L V+DE
Sbjct: 258 FKVASIVGGLSLQKQERILKYVPEIVIATPGRLLALMTSAEADSCLSDWSHLQCLVVDET 317
Query: 349 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 408
DRMIE GHF +LQ I+D L KK QT VFSAT+ +
Sbjct: 318 DRMIEKGHFEDLQHILDTLRKNTS--------------------KKLQTFVFSATLTYTH 357
Query: 409 DFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLT 450
K KHG + ++ I L E G+R I+D+T
Sbjct: 358 PASK--KHGDVN-ADKIDTDGKISRLIEITGIRKEKHRIIDIT 397
>gi|312381486|gb|EFR27227.1| hypothetical protein AND_06199 [Anopheles darlingi]
Length = 799
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 176/343 (51%), Gaps = 71/343 (20%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
+E S E+ W EL + ++K+I GFK PT IQ+ +PAA +D++GAAETGSG
Sbjct: 212 AEGYSSVEYIRWIELGVSEPIVKAIAEKGFKTPTEIQEKSLPAAIFGHRDLLGAAETGSG 271
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYA------------------------- 258
KTLAFGLP+++ + + ++ ++ + +E+E
Sbjct: 272 KTLAFGLPMLEGIRKLKQLNEPIIYDNEDESETVHSDHELTPPPEDYELSPEDQKVFAMG 331
Query: 259 ---------PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL 309
P L LI+TPTRELALQ+ DHLK V K ++ + + KQER+L
Sbjct: 332 SSKKKQPMDPTKPLYGLILTPTRELALQINDHLKSVTKYTDINIATVFAV----KQERML 387
Query: 310 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
+ PE+V+ TPGRLWEL+ G +HL ++ + F V+DE DRM+E GHF EL+ +++++
Sbjct: 388 RKCPEIVIATPGRLWELIQAGNQHLAKVMHIRFLVIDETDRMLERGHFEELKQLLELI-- 445
Query: 370 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLK------- 422
N + E +KKR+ +FSAT+ + D + LK K K
Sbjct: 446 -NTNEEA---------------KKKRRNYIFSATLTMDHDLPEHLKKNPKKAKKVMKETP 489
Query: 423 -QSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
Q +N L I+T+ GM N IVDLT A L ES I
Sbjct: 490 GQRLNNL--IQTI----GM-TNPKIVDLTKEQATAQTLTESRI 525
>gi|315040650|ref|XP_003169702.1| ATP-dependent RNA helicase MAK5 [Arthroderma gypseum CBS 118893]
gi|311345664|gb|EFR04867.1| ATP-dependent RNA helicase MAK5 [Arthroderma gypseum CBS 118893]
Length = 743
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 176/314 (56%), Gaps = 29/314 (9%)
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAET 220
E V EA++ + AW+ L L L S+ RL F +PTPIQKA IP G+D+IG A T
Sbjct: 155 EAVEEADV--DVSAWDTLDLRSELQTSLSRLKFAQPTPIQKAAIPEIL-AGRDVIGKAAT 211
Query: 221 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 280
GSGKTLAFGLPI+Q LL+ +E+ + K ALI++PTRELA Q+
Sbjct: 212 GSGKTLAFGLPILQYLLDRQEQHPSTPSTSSKSHGKTP-----TALILSPTRELAHQLVK 266
Query: 281 HLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 337
HLKEV A ++ + I GG+S KQ+R L A +++VGTPGRLW+++S K L +L
Sbjct: 267 HLKEVTSSAPNVDAYIASITGGLSVHKQQRQL-AEADVIVGTPGRLWDMVSSTPKILTKL 325
Query: 338 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQT 397
+ F V+DEADR++ GHF+E+ ++ L S+E + ++ +RQT
Sbjct: 326 RLIKFLVVDEADRLLSEGHFKEVGELLSALDKARTSDEDIDDDSEEEDETV-----ERQT 380
Query: 398 LVFSATIALSADFRKKLKHGSLKLKQSV--NGLN---SIETLSERAGMR-ANVAIVDLTN 451
LVFSAT F+K L+ K S N L+ S+E L ++ R +D+
Sbjct: 381 LVFSAT------FQKGLQQKLAKRDNSFHDNLLDKKESMEYLLKKLRFRDEKPRFIDVNP 434
Query: 452 VSVLANKLEESFIE 465
+S +A+ L+E IE
Sbjct: 435 ISQMADNLKEGIIE 448
>gi|307201303|gb|EFN81150.1| ATP-dependent RNA helicase DDX24 [Harpegnathos saltator]
Length = 640
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 149/286 (52%), Gaps = 62/286 (21%)
Query: 169 STEFD--AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
STEF+ AW+ + + +++K++ F PT IQ +PAA +DI+GAAETGSGKTL
Sbjct: 11 STEFNTAAWSSMGVPSVIIKALADQNFYTPTIIQAKTLPAALLGYRDILGAAETGSGKTL 70
Query: 227 AFGLPIMQRLLE-EREKAGKMLEEKGEEAE------------------------------ 255
AFG+PI++ +LE + +KA + +EK E
Sbjct: 71 AFGIPIIKGILELKSQKAKTIADEKSTETSENEERTCHEVETEDNSTNSDSEDENLSEYE 130
Query: 256 -----------KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEK 304
+ P L ALI+ PTREL +Q+ HL + K ++++ + GG++ K
Sbjct: 131 NCINVIELDNCQNIPSKPLYALILAPTRELVVQIKQHLTQAVKYTDIKIAAVFGGLAAVK 190
Query: 305 QERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 364
QERLL PE+V+ TPGRLWEL+ G HL ++ ++ F +DE DRM+E GHF+EL I+
Sbjct: 191 QERLLNQGPEIVIATPGRLWELIQQGNPHLSQVDSIRFLAIDETDRMLEKGHFQELHDIL 250
Query: 365 DMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
+ V ++ KKRQT VFSAT+ + D
Sbjct: 251 QK------------------INVDPIKLKKRQTFVFSATLTMVHDL 278
>gi|226288117|gb|EEH43630.1| ATP-dependent RNA helicase MAK5 [Paracoccidioides brasiliensis
Pb18]
Length = 772
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 222/457 (48%), Gaps = 81/457 (17%)
Query: 62 GFLSLEEIDEASYNLQIPKPE-----KGKPGKKTNTKKRKRS-SANEEDPGD-------- 107
GF LEEI+ + I +P K K K K RS S+N ED D
Sbjct: 53 GFFGLEEIE----GVDIVRPAGQGQIKFKAAKNKVKKTADRSISSNAEDEADEWSRFSDS 108
Query: 108 -GDG-------DEDGNGVQKEQEK----------------------NLKNQKGKKKKKKK 137
G G +++G +QK++ + LK KGK KK
Sbjct: 109 AGPGQDVEDVYNDEGKQIQKDETREKKKVKKSNKDRADEPREKKRLKLKEAKGKNNKKHA 168
Query: 138 KGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPT 197
++ S N DD E+ VS AW L + L S+ +L F +PT
Sbjct: 169 PRTDVQP-GMSFDALNEEDDQEDVDVS---------AWEPLGISAELQTSLAKLKFAKPT 218
Query: 198 PIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKY 257
PIQ ACIP A G D++G A TGSGKTLAF +PI++ LE + ++ G ++ +
Sbjct: 219 PIQSACIPVIA-AGHDVVGKAPTGSGKTLAFVIPILEYHLENNRD--EPIQNTGSDSSRK 275
Query: 258 APKGHLRALIITPTRELALQVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPE 314
P ALI++PTRELA Q++ HL A IN R+ + GG+S +KQ RLL A +
Sbjct: 276 HPI----ALILSPTRELAHQISKHLTAFISNAPNINARIALLTGGLSVQKQHRLL-ANAD 330
Query: 315 LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 374
+V+GTPGRLW+++S G+ + + ++ F V+DEADR++ GHF+E++ I+ L ++
Sbjct: 331 IVIGTPGRLWDVISNGQGLIRKFQSIKFLVVDEADRLLSEGHFKEVEEILTALDRKEIND 390
Query: 375 EGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNG-----LN 429
+ + + ++++ RQTLVFSAT F + L+ + ++G
Sbjct: 391 GVEESDSDSESERANIKSFPRQTLVFSAT------FHRGLQQKLAGKSRFIDGGLLDNKE 444
Query: 430 SIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
S+E L E+ R +D+ VS +A L+E +E
Sbjct: 445 SMEYLLEKLNFREEKPKFIDVNPVSQMAENLKEGLVE 481
>gi|91207158|sp|Q4WMS3.2|MAK5_ASPFU RecName: Full=ATP-dependent RNA helicase mak5
Length = 777
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 176/308 (57%), Gaps = 18/308 (5%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
+E + + AW+ L L P ++ + ++ F PT +Q+ACIP +G D+IG A TGSG
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQIL-EGHDVIGKASTGSG 250
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
KTLAFG+PI++ LE++ +E+ E + ALI++PTRELA Q++ H+
Sbjct: 251 KTLAFGIPILEHYLEKKRDDISAQKEQMSEKDSTPI-----ALILSPTRELAHQLSKHIG 305
Query: 284 EV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
E+ A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++S G+ + ++ +
Sbjct: 306 ELIAQAPGVNARIALLTGGLSVQKQQRLLSG-ADIVIGTPGRVWEILSTGQGLIRKMQQI 364
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 400
F V+DEADR++ GHF+E++ I++ L E S +RQTLVF
Sbjct: 365 KFLVVDEADRLLSEGHFKEVEEILNSLDRVEDGEVPDGE--DQASEEESDPSSERQTLVF 422
Query: 401 SATIALSADFRKKLKHGSLKLKQS--VNGLNSIETLSERAGMR-ANVAIVDLTNVSVLAN 457
SAT D ++KL G K + ++ S++ L ++ R +D+ +S +A+
Sbjct: 423 SAT--FHRDLQQKLA-GKRKWTRGDIMDKKESMDYLLQKLNFREEKPKFIDMNPISQMAD 479
Query: 458 KLEESFIE 465
L+E +E
Sbjct: 480 NLKEGIVE 487
>gi|159124341|gb|EDP49459.1| ATP dependent RNA helicase, putative [Aspergillus fumigatus A1163]
Length = 795
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 176/308 (57%), Gaps = 18/308 (5%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
+E + + AW+ L L P ++ + ++ F PT +Q+ACIP +G D+IG A TGSG
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQIL-EGHDVIGKASTGSG 250
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
KTLAFG+PI++ LE++ +E+ E + ALI++PTRELA Q++ H+
Sbjct: 251 KTLAFGIPILEHYLEKKRDDISAQKEQMSEKDSTPI-----ALILSPTRELAHQLSKHIG 305
Query: 284 EV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
E+ A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++S G+ + ++ +
Sbjct: 306 ELIAQAPGVNARIALLTGGLSVQKQQRLLSG-ADIVIGTPGRVWEILSTGQGLIRKMQQI 364
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 400
F V+DEADR++ GHF+E++ I++ L E S +RQTLVF
Sbjct: 365 KFLVVDEADRLLSEGHFKEVEQILNSLDRVEDGEVPDGE--DQASEEESDPSSERQTLVF 422
Query: 401 SATIALSADFRKKLKHGSLKLKQS--VNGLNSIETLSERAGMR-ANVAIVDLTNVSVLAN 457
SAT D ++KL G K + ++ S++ L ++ R +D+ +S +A+
Sbjct: 423 SAT--FHRDLQQKLA-GKRKWTRGDIMDKKESMDYLLQKLNFREEKPKFIDMNPISQMAD 479
Query: 458 KLEESFIE 465
L+E +E
Sbjct: 480 NLKEGIVE 487
>gi|70991861|ref|XP_750779.1| ATP dependent RNA helicase [Aspergillus fumigatus Af293]
gi|66848412|gb|EAL88741.1| ATP dependent RNA helicase, putative [Aspergillus fumigatus Af293]
Length = 795
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 176/308 (57%), Gaps = 18/308 (5%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
+E + + AW+ L L P ++ + ++ F PT +Q+ACIP +G D+IG A TGSG
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQIL-EGHDVIGKASTGSG 250
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
KTLAFG+PI++ LE++ +E+ E + ALI++PTRELA Q++ H+
Sbjct: 251 KTLAFGIPILEHYLEKKRDDISAQKEQMSEKDSTPI-----ALILSPTRELAHQLSKHIG 305
Query: 284 EV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
E+ A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++S G+ + ++ +
Sbjct: 306 ELIAQAPGVNARIALLTGGLSVQKQQRLLSG-ADIVIGTPGRVWEILSTGQGLIRKMQQI 364
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 400
F V+DEADR++ GHF+E++ I++ L E S +RQTLVF
Sbjct: 365 KFLVVDEADRLLSEGHFKEVEEILNSLDRVEDGEVPDGE--DQASEEESDPSSERQTLVF 422
Query: 401 SATIALSADFRKKLKHGSLKLKQS--VNGLNSIETLSERAGMR-ANVAIVDLTNVSVLAN 457
SAT D ++KL G K + ++ S++ L ++ R +D+ +S +A+
Sbjct: 423 SAT--FHRDLQQKLA-GKRKWTRGDIMDKKESMDYLLQKLNFREEKPKFIDMNPISQMAD 479
Query: 458 KLEESFIE 465
L+E +E
Sbjct: 480 NLKEGIVE 487
>gi|363734223|ref|XP_421338.3| PREDICTED: ATP-dependent RNA helicase DDX24 [Gallus gallus]
Length = 809
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 170/362 (46%), Gaps = 78/362 (21%)
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAE 219
E L + + + AW +L + ++K++ LGF PTPIQ +P+A DI+GAAE
Sbjct: 190 EVLSTSTDHKADVSAWKDLFVPQPVLKALSSLGFSAPTPIQALTLPSAIRDNMDILGAAE 249
Query: 220 TGSGKTLAFGLPIMQRLLE-------------------------------EREKAG-KML 247
TGSGKTLAF +P++ +LE E EK + +
Sbjct: 250 TGSGKTLAFAIPMIHSVLEWQKSNSSASVSDSVSKKPYQHHDEMRWENDDEAEKPNHQQV 309
Query: 248 EEKGEEAEKYAPKGHLRA-------------------------LIITPTRELALQVTDHL 282
E+ G+E + G ++ L++TPTRELA+QV H+
Sbjct: 310 EDSGDEDDASFATGCVKVQENTEYDSSNKEHTVGLHKKRPLLGLVLTPTRELAVQVKHHI 369
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 342
VAK ++ +VGGM+ +KQER+L +PE+V+ TPGRLWEL+ HL L L
Sbjct: 370 DAVAKFTGIKTAILVGGMAAQKQERVLNRKPEIVIATPGRLWELIKERHPHLSNLRQLRC 429
Query: 343 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 402
V+DEADRM+E GHF EL ++++L N+ Q KRQT VFSA
Sbjct: 430 LVIDEADRMVERGHFLELSQLLEVL------NDSQYN-------------PKRQTFVFSA 470
Query: 403 TIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
T+ L ++ K +E L E+ G++ ++DLT L E+
Sbjct: 471 TLTLVHQTPARILQKKNAKKIDKK--TKLEMLMEKVGIKGKPKVIDLTRKEATVETLMET 528
Query: 463 FI 464
I
Sbjct: 529 RI 530
>gi|452848186|gb|EME50118.1| hypothetical protein DOTSEDRAFT_165107 [Dothistroma septosporum
NZE10]
Length = 743
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 213/417 (51%), Gaps = 43/417 (10%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKTNTKKRKRS----SANEEDPGDGDGDEDGNGV 117
GF LEEI+ ++ + + E G + + + AN E+ G ED G
Sbjct: 49 GFFGLEEIE----DVDVVRHESGTIAFHSKVASSQDAEDSNGANGEEKDSWSGFEDDAGD 104
Query: 118 QKEQEKNLKNQKGKKKKKKK-KGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWN 176
K++K K K++ K K K K + + S E+ EAE S + AW
Sbjct: 105 DAPLAKSVKVTKAKQESKSKTKSKPADKAGKETSTSGVFSGLAEDAGDEAE-SVDVSAWR 163
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL 236
L+L P M S+ +L F +PTP+Q+A IP + G D++G A TGSGKT AFG+PI++R
Sbjct: 164 SLKLSPDTMASLSKLKFSKPTPVQQAVIPEVLN-GHDVVGKASTGSGKTFAFGIPILERY 222
Query: 237 LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI---NVRV 293
LE + K + E AP ALI++PTRELA Q+ HL + + +
Sbjct: 223 LEAAAR-------KSRKGEGKAP----LALILSPTRELAHQLDHHLTALFSEVLSSKPSI 271
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG+S KQ+RLL+ ++++GTPGRLWE++S G+ L + F V+DEADR++
Sbjct: 272 ATLTGGLSLLKQQRLLR-DADVLIGTPGRLWEIISSGQGIGAALKQIEFLVVDEADRLLS 330
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 413
G+F+E++ I++ L T+ ++E + E + S RQTLVFSAT F +
Sbjct: 331 QGNFKEVEDILNTLDRTD-TDEDKKETNNSGPDSHS-----RQTLVFSAT------FDRG 378
Query: 414 LKH---GSLKLKQSVNGLN-SIETLSERAGMRANVA-IVDLTNVSVLANKLEESFIE 465
L++ G+ K K + G ++E L + R +D+ +A L+E +E
Sbjct: 379 LQNKLVGNFKYKDDLLGTKETLEYLLSKLNFREKPPKFIDMNPTKQMATGLKEGMVE 435
>gi|327259240|ref|XP_003214446.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Anolis
carolinensis]
Length = 799
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 169/349 (48%), Gaps = 79/349 (22%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
AW L + +++++ LGF PTPIQ +P+A D++GAAETGSGKTLAF +P
Sbjct: 189 ISAWKGLFVPKPVLQALSELGFSAPTPIQALALPSAIRDSMDVLGAAETGSGKTLAFAIP 248
Query: 232 IMQRLLEEREKAGK------MLEEKGEEAEKYA--------------------------- 258
++ +L+ + G LE+ G+ E+ +
Sbjct: 249 MIHSILQWYKSRGLPKGSKIQLEDGGDSEEELSKEEASEDIGGLSSAEANCAAISSVESL 308
Query: 259 -------------PK--------GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIV 297
PK L L++TPTRELA+QV H+ V + ++ +V
Sbjct: 309 VTLCEKASEDGDHPKHDTVGERSNPLLGLVLTPTRELAVQVKHHIDAVTRYTGIKTANLV 368
Query: 298 GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 357
GGM+ +KQ+R+LK +PE+V+ TPGRLWEL+ + HL L L V+DEADRM+E GHF
Sbjct: 369 GGMAPQKQQRILKRKPEIVIATPGRLWELIQEKQPHLSSLKQLRCLVIDEADRMVEKGHF 428
Query: 358 RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL--SADFRKKLK 415
EL +++ML SS KRQT VFSAT+ L A R K
Sbjct: 429 LELSQLLEMLN-------------------SSQYNPKRQTFVFSATLTLIHQAPARVFQK 469
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
++++ + +E L ++ GM++ ++DLT L E+ I
Sbjct: 470 KNAIRIDKKTK----LELLMQKVGMKSKPKVIDLTRKEATVETLTETRI 514
>gi|212529054|ref|XP_002144684.1| ATP dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
gi|210074082|gb|EEA28169.1| ATP dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
Length = 770
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 159/502 (31%), Positives = 244/502 (48%), Gaps = 89/502 (17%)
Query: 22 KRTRKSR----EAEKLNSLKWNSSFSAADNDPFAFLVGSNELD-------------GGFL 64
KR R+SR +A K L+ N+ D D A +VG ++LD GGF
Sbjct: 4 KRGRESRNLAKKAAKKQRLEENT-----DQDGDA-IVGLDDLDWQTVQLPDRLDDMGGFF 57
Query: 65 SLEEIDEASYNLQIPKPEKG----------KPGK----KTNTKKRKRSSANEEDPGDGDG 110
LEEID + I +PE KP K KT T + EE G D
Sbjct: 58 GLEEID----GVDIIRPESSGQIKFKVAADKPTKSILKKTKTTNETPNENTEEWSGFSDA 113
Query: 111 DEDGNGVQKEQEKNLKNQKGKKKK----------KKKKGKKIKTVEESVTVSNGPDDAEE 160
++ K+Q++N K+++ K+K K+++ KIK + S + + P A
Sbjct: 114 EKQEVKPHKKQKQNKKSEQQKEKSTTDEKKPAATKQQQQPKIKADKSSEKIQSLPFTA-- 171
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAET 220
L E E + AW L L P L I +L F P+ IQ+A IP G D++G A T
Sbjct: 172 -LEEEEEDEIDVSAWEALGLSPALQTGISKLKFSTPSTIQQAVIPEVL-AGHDVVGKAST 229
Query: 221 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 280
GSGKTLAFG+PI++ L + + E K ++ ++ P ALI++PTRELA Q+
Sbjct: 230 GSGKTLAFGIPILEYYLNTKGQRDTSKENKKKKKKESQPI----ALILSPTRELAHQLAK 285
Query: 281 HLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 337
H+ + N R+ + GG++ +KQ+RLL ++V+GTPGR+WE++S G + +
Sbjct: 286 HIGALNTHTPAANARIALLTGGLAIQKQQRLLN-DADIVIGTPGRVWEILSSGTGLIQRM 344
Query: 338 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMT--------NGSNEGQSEQTQTCVTVSS 389
+ + VLDEADR++ +GH++EL+ I+D L N SN + ++ + + +
Sbjct: 345 SGVKYLVLDEADRLLSDGHYKELEEILDALDRKEDNDEADENSSNSEEEDEQKAEASAA- 403
Query: 390 LQRKKRQTLVFSATIALSADFRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMR-AN 443
RQTLVFSAT F K L+ G +N S+E L ++ R
Sbjct: 404 -----RQTLVFSAT------FHKGLQQKLSGKGKFMSSDLMNKTESMEYLLQKLKFREEK 452
Query: 444 VAIVDLTNVSVLANKLEESFIE 465
+D+ +S +A L+E +E
Sbjct: 453 PKFIDVNPISQMAQGLKEGILE 474
>gi|350407757|ref|XP_003488184.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Bombus impatiens]
Length = 757
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 190/392 (48%), Gaps = 72/392 (18%)
Query: 126 KNQKGKKKKKKKKGKKIKTVEESVTVSNGPD-------DAEEELVSEAEISTEFDA--WN 176
K +K K +KK +G K + + ++ NG D + + + DA W
Sbjct: 87 KAKKTKSPEKKLEGGNAKKIPKCLSSKNGLDIGPNNNNQFSNDCNKDKNDVYDIDAQRWY 146
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL 236
L + ++K++ F EPT IQ +P A +DI+GAAETGSGKTLAFG+PI+ +
Sbjct: 147 MLGVPTPVIKALKDQQFHEPTAIQALTLPPAILGHRDILGAAETGSGKTLAFGIPIINGI 206
Query: 237 LEEREKAGK-------------------------MLEEKGEEAEKYAP------------ 259
LE + K + M+E +E
Sbjct: 207 LELKNKQSQQSDMEFGKEITGITKNKGWICSENEMVENDNSSSESDCCVRVINNVKMSKT 266
Query: 260 ---KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELV 316
L ALI+TPTRELA+Q+ DHL + K +++V ++GGM+ KQER+L PE+V
Sbjct: 267 QNYTKPLYALILTPTRELAIQIKDHLTKAVKYTDIKVAVVLGGMAAVKQERILSKGPEIV 326
Query: 317 VGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEG 376
+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+ELQ +++ + M NE
Sbjct: 327 IATPGRLWELIQQGNPHLSKVDSIKYLAIDETDRMLEKGHFQELQQLLEKINM----NEK 382
Query: 377 QSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLK----QSVNGLNSIE 432
+ E+ RQT VFSAT+ + D + L+ K Q + ++
Sbjct: 383 KMEE--------------RQTFVFSATLTMVHDIPEYLEKKKRKHTKSKIQKLTPAQKLQ 428
Query: 433 TLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
+ E G++ N I+D+T S A L E I
Sbjct: 429 KIMELVGIK-NPKIIDVTKKSGTATNLTECRI 459
>gi|189201219|ref|XP_001936946.1| ATP-dependent RNA helicase MAK5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984045|gb|EDU49533.1| ATP-dependent RNA helicase MAK5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 778
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 180/322 (55%), Gaps = 42/322 (13%)
Query: 151 VSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQ 210
++N PDD +E++ AW+EL L ++ ++ +L F +PT IQK+ IP
Sbjct: 197 LANQPDDDDEDV----------SAWDELELSEEMLGALAKLKFSKPTTIQKSTIPEIL-A 245
Query: 211 GKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 270
G+D+IG A TGSGKTLAFG+PI++ L R A K E E P ALII P
Sbjct: 246 GRDVIGKASTGSGKTLAFGIPIVESYLASRSSASK-------EPEDKMPI----ALIIAP 294
Query: 271 TRELALQVTDHLKEV-AKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELM 327
TRELA Q+ HL + AKG + I GG+S +KQ R L+ + ++VVGTPGRLWE++
Sbjct: 295 TRELAHQINAHLIALCAKGDFDPPYIASITGGLSVQKQRRQLE-KADIVVGTPGRLWEVI 353
Query: 328 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE-GQSEQTQTCVT 386
S G+ L + + F V+DEADR++ GHF+E+ I+ +L + ++E +S++ +
Sbjct: 354 SDGQGLLRKFKQIKFLVVDEADRLLSEGHFKEMGEILKVLEPDDVTDENAESDEKEEI-- 411
Query: 387 VSSLQRKKRQTLVFSATIA--LSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANV 444
KRQTLVFSAT L K+K G L ++ S+E L ++ R
Sbjct: 412 -------KRQTLVFSATFGKDLQRKLAGKVKGGGSDL---MSQQQSMEYLLKKLQFREEK 461
Query: 445 AI-VDLTNVSVLANKLEESFIE 465
+ +D +S +A+KL+E IE
Sbjct: 462 PVFIDANPMSQMASKLQEGLIE 483
>gi|302407546|ref|XP_003001608.1| ATP-dependent RNA helicase MAK5 [Verticillium albo-atrum VaMs.102]
gi|261359329|gb|EEY21757.1| ATP-dependent RNA helicase MAK5 [Verticillium albo-atrum VaMs.102]
Length = 787
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 175/333 (52%), Gaps = 38/333 (11%)
Query: 140 KKIKTVEESV--TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPT 197
KK +E +V T+ DD E+ +SE W L L P + +I RL F +PT
Sbjct: 198 KKDAALESNVFSTLEEAEDDTEDLDMSE---------WMGLNLSPATIATIRRLKFTKPT 248
Query: 198 PIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKY 257
IQ A IP G D+IG A TGSGKTLAFG+PI+ + LE+ + E + E
Sbjct: 249 TIQCAAIPHI-QAGHDVIGKASTGSGKTLAFGIPIVDKWLEKNGEEQDSAMETDDAPEAK 307
Query: 258 APKGHLRALIITPTRELALQVTDHLKEVAKGINVR--VVPIVGGMSTEKQERLLKARPEL 315
AP ALII+PTRELA Q+ +H+KE+ G++ + V + GG+S KQ+R L A+ ++
Sbjct: 308 AP----LALIISPTRELAHQIMNHIKELCAGLSKQPYVCSVTGGLSVYKQQRQL-AKADI 362
Query: 316 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 375
VVGTPGRLWE++S + + + V+DEADR++ GHF+E + I L +
Sbjct: 363 VVGTPGRLWEVLSTNTTVMESFKKIQYLVVDEADRILSEGHFKEAEEIFKALDRNVTEED 422
Query: 376 GQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIET 433
+ EQT + RQTLVFSAT L K K G + ++ S+E
Sbjct: 423 DEDEQTLS----------PRQTLVFSATFHKGLQQKLAGKGKFGLMSEEE------SMEY 466
Query: 434 LSERAGMRANVA-IVDLTNVSVLANKLEESFIE 465
L +R R VD+ VS +A L+E IE
Sbjct: 467 LLKRLNFREEKPEFVDVNPVSQMAEGLKEGMIE 499
>gi|443922417|gb|ELU41869.1| delta-sterol C-methyltransferase [Rhizoctonia solani AG-1 IA]
Length = 1600
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/314 (38%), Positives = 169/314 (53%), Gaps = 44/314 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W + LHP++ S+ L F PTPIQK+ +P A QG+D++G AETGSGKTLA+ LPI+Q
Sbjct: 137 WASMSLHPIISHSLLELSFTNPTPIQKSALPFA-QQGRDVVGVAETGSGKTLAYSLPILQ 195
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK------- 287
+L + K A ALI+ PTRELALQV +HLK+V
Sbjct: 196 YILS---------NPTSNSSRKLA------ALILAPTRELALQVCEHLKKVISAGASSSN 240
Query: 288 -GI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL-----HTL 340
G+ V + IVGG+S +KQ R+L+ +++V TPGRLW+++ GE V L ++
Sbjct: 241 GGVPRVSIAAIVGGLSVQKQRRILERGADIIVATPGRLWDVL--GEVFSVYLLAERIRSV 298
Query: 341 SFFVLDEADRMIENGHFRELQSIIDML-----PMTNGSNEGQ---SEQTQTCVTVSSLQR 392
F VLDEADRM+E GHF+EL +I+ + P G +E T V S+
Sbjct: 299 QFLVLDEADRMVEEGHFQELDNIVKLTVRRKEPEEQDEMAGDPVFAEATAAAVD-SAPAN 357
Query: 393 KKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTN 451
+ QT VFSAT +S + + L S K K ++++ L + R N AIVDL+
Sbjct: 358 TEMQTFVFSAT--MSKELQINLSRRSTKRKNKDQKGSTLDDLLMKLDFRDPNPAIVDLSP 415
Query: 452 VSVLANKLEESFIE 465
+ L ES IE
Sbjct: 416 EYGKVSTLTESRIE 429
>gi|67522587|ref|XP_659354.1| hypothetical protein AN1750.2 [Aspergillus nidulans FGSC A4]
gi|74657524|sp|Q5BCI0.1|MAK5_EMENI RecName: Full=ATP-dependent RNA helicase mak5
gi|40744880|gb|EAA64036.1| hypothetical protein AN1750.2 [Aspergillus nidulans FGSC A4]
gi|259487094|tpe|CBF85492.1| TPA: ATP-dependent RNA helicase mak5 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BCI0] [Aspergillus
nidulans FGSC A4]
Length = 770
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 170/298 (57%), Gaps = 21/298 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AW L L P + S+ +L F PT +QK+CIP G D+IG A TGSGKTLAFGLPI+
Sbjct: 198 AWEPLGLSPETLTSLSKLKFSTPTSVQKSCIPPIL-DGHDVIGKASTGSGKTLAFGLPIL 256
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGIN 290
+ LE RE+ + E EE EK ALI++PTRELA Q+ H+ + A G+N
Sbjct: 257 EHYLE-RERRKTIDSE--EEKEKIPI-----ALILSPTRELAHQLQKHIYGLISNAPGVN 308
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
R + GG+S +KQ+RLL+ ++V+GTPGR+WE++ G+ + + + F V+DEADR
Sbjct: 309 ARTALLTGGLSVQKQQRLLET-ADIVIGTPGRVWEVLRTGQGLIRRMQGIKFLVIDEADR 367
Query: 351 MIENGHFRELQSIIDMLP-MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
++ GHF+E++ I+ L + +G + + + V ++ RQTLVFSAT D
Sbjct: 368 LLSEGHFKEVEDILSSLDRVEDGGPPDEEDDSSEENVVPGVE---RQTLVFSAT--FHRD 422
Query: 410 FRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
++KL G +N S+E L ++ R +D+ VS +A L+E +E
Sbjct: 423 LQQKLAGKGKWTGGDIMNKKESMEYLLQKLNFREEKPKFIDVNPVSQMAEGLKEGIVE 480
>gi|334310507|ref|XP_001370949.2| PREDICTED: ATP-dependent RNA helicase DDX24 [Monodelphis domestica]
Length = 814
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 177/355 (49%), Gaps = 84/355 (23%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ +GF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 201 DVSAWKDLFVPEPVLQALSSMGFSAPTPIQALALAPAIRDNLDILGAAETGSGKTLAFAI 260
Query: 231 PIMQRLL----EERE----KAG--------------------KML-------EEKGEEAE 255
P++ +L E++E +AG ++L EE+ +E
Sbjct: 261 PMIHSVLRWQDEQKETHHGQAGLHSADGESLGDADDSSDDSNEILNPLPMEREEERDENP 320
Query: 256 KYAPK------------------GH------LRALIITPTRELALQVTDHLKEVAKGINV 291
++P GH L L++TPTRELA+QV H+ VAK +
Sbjct: 321 SHSPSDKEESGDIKLEFEYEKAAGHRNRSNPLLGLVLTPTRELAVQVKHHIDAVAKFTGI 380
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
R +VGGM+ +KQ+R+L RPE+V+ TPGRLWEL+ +HL +L L V+DEADRM
Sbjct: 381 RTALLVGGMAPQKQQRMLTRRPEIVIATPGRLWELIKEQHQHLSDLKQLRCLVIDEADRM 440
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL--SAD 409
+E GHF EL +++ML N+ Q +RQT VFSAT+ L A
Sbjct: 441 VEKGHFVELSQLLEML------NDSQY-------------NPERQTFVFSATLTLVHQAP 481
Query: 410 FRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
R K + K+ ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 482 ARVFQKKNAKKIDKT----GKLDMLMQKIGMRGKPKVIDLTRKEATVETLTETKI 532
>gi|402591039|gb|EJW84969.1| DEAD/DEAH box helicase [Wuchereria bancrofti]
Length = 485
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 102/241 (42%), Positives = 136/241 (56%), Gaps = 33/241 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L + ++K++ +GF EPT IQK IP+A DIIGAAETGSGKTLAFG+P+++
Sbjct: 4 WINLYISDAVLKAVADMGFTEPTEIQKLVIPSAVRDRFDIIGAAETGSGKTLAFGVPVVE 63
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
LL + LE G++ KG +RALI+ PTREL +Q+ +H+ + K +V
Sbjct: 64 HLLANQS----FLESSGQK------KG-IRALILAPTRELVMQIKNHIDALLKYTPFKVA 112
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH--LVELHTLSFFVLDEADRMI 352
+VGG+S +KQER+LK PE+V+ TPGRL LM E L + L V+DE DRMI
Sbjct: 113 SVVGGLSLQKQERILKYVPEIVIATPGRLLALMRSAEADSCLSDWSHLQCLVVDETDRMI 172
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 412
E GHF +LQ I+D L KK QT VFSAT+ + K
Sbjct: 173 EKGHFEDLQHILDTLRKNTS--------------------KKLQTFVFSATLTYTHPVPK 212
Query: 413 K 413
K
Sbjct: 213 K 213
>gi|325096020|gb|EGC49330.1| ATP-dependent RNA helicase MAK5 [Ajellomyces capsulatus H88]
Length = 770
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 168/302 (55%), Gaps = 30/302 (9%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+ L + + S+ +L F +PTPIQ ACIP A G D++G A TGSGKTLAFG+PI++
Sbjct: 189 WDPLDISAEIQTSLSKLRFAKPTPIQTACIPLIA-SGHDVVGKASTGSGKTLAFGIPILE 247
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGINV 291
L+ R + + GE + KY ALI++PTRELA Q++ H+ + A IN
Sbjct: 248 YYLKNRREE-PVQHNDGELSSKYPI-----ALILSPTRELAHQLSKHITALCTNAPNINA 301
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
R+ + GG+S +KQ+R+L A ++V+GTPGRLW+++S G L + + F V+DEADR+
Sbjct: 302 RIALLTGGLSVQKQQRVL-ANADIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEADRL 360
Query: 352 IENGHFRELQSIIDMLPMTNGSNE--GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+ GHF+E++ I+ L ++ SE VS RQTLVFSAT
Sbjct: 361 LSEGHFKEVEEILTALDRKEIHDKVTADSESEDDASKVSP-----RQTLVFSAT------ 409
Query: 410 FRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLEESF 463
F K L+ G ++ S+E L ++ R + +D+ V+ +A L+E
Sbjct: 410 FHKGLQQKLAGKGRYFDGDLLDDKQSMEYLLKKLNFREDRPKFIDVNPVAQMAENLKEGL 469
Query: 464 IE 465
+E
Sbjct: 470 VE 471
>gi|346970819|gb|EGY14271.1| ATP-dependent RNA helicase MAK5 [Verticillium dahliae VdLs.17]
Length = 700
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 176/333 (52%), Gaps = 38/333 (11%)
Query: 140 KKIKTVEESV--TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPT 197
KK +E +V T+ DDAE+ +SE W L L P + +I RL F +PT
Sbjct: 111 KKDAALESNVFSTLEEAEDDAEDLDMSE---------WMGLNLSPATIATIRRLKFTKPT 161
Query: 198 PIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKY 257
IQ IP G D+IG A TGSGKTLAFG+PI+ + LE+ + + E + E
Sbjct: 162 TIQSTAIPHI-QAGHDVIGKASTGSGKTLAFGIPIVDKWLEKNGEEQESAMETDDAPEAK 220
Query: 258 APKGHLRALIITPTRELALQVTDHLKEVAKGINVR--VVPIVGGMSTEKQERLLKARPEL 315
AP ALII+PTRELA Q+ +H+K++ G++ + V + GG+S KQ+R L A+ ++
Sbjct: 221 AP----LALIISPTRELAHQIMNHIKDLCAGLSKQPYVCSVTGGLSVYKQQRQL-AKADI 275
Query: 316 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 375
VVGTPGRLWE++S + + + V+DEADR++ GHF+E + I L +
Sbjct: 276 VVGTPGRLWEVLSTNMTVMESFKKIQYLVVDEADRILSEGHFKEAEEIFKALDRNVTEED 335
Query: 376 GQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIET 433
+ EQT + RQTLVFSAT L K K G + ++ S+E
Sbjct: 336 DEDEQTLS----------PRQTLVFSATFHKGLQQKLAGKGKFGLMSEEE------SMEY 379
Query: 434 LSERAGMRANVA-IVDLTNVSVLANKLEESFIE 465
L +R R VD+ VS +A L+E IE
Sbjct: 380 LLKRLNFREEKPEFVDVNPVSQMAKGLKEGMIE 412
>gi|358369372|dbj|GAA85987.1| ATP dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 766
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 174/300 (58%), Gaps = 24/300 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AW L L P ++ + ++ F PT +QK+CIP G D+IG A TGSGKTLAFG+PI+
Sbjct: 193 AWESLGLSPEILTGLSKMKFTTPTLVQKSCIPQIL-DGHDVIGKASTGSGKTLAFGIPIL 251
Query: 234 QRLLEERE---KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA---K 287
+ LE++ +AGK EEK +++ AP ALI++PTRELA Q+ H+ E+A
Sbjct: 252 EHYLEKKREDLRAGK--EEKKKDS---API----ALIMSPTRELAHQLAKHIGELALHAP 302
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
G + R+ + GG+S +KQ+R+L A ++V+GTPGR+WE++S G+ + ++ + F V+DE
Sbjct: 303 GSSARIALLTGGLSVQKQQRVL-AGADIVIGTPGRVWEVLSSGQGLIRKMSDIKFLVIDE 361
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADR++ GHF+E + I+ L + G + + R +RQTLVFSAT
Sbjct: 362 ADRLLSEGHFKEAEEILGALDRVEDGDFGGDDSEDEEKEDA---RAQRQTLVFSAT--FH 416
Query: 408 ADFRKKLKHGSLKLKQSV-NGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
D ++KL + + + S+E L ++ R +D+ VS +A L+E +E
Sbjct: 417 RDLQQKLAGKARWTGGDIMSNKESMEYLLQKLKFREEKPKFIDVNPVSQMAEGLKEGIVE 476
>gi|336375445|gb|EGO03781.1| hypothetical protein SERLA73DRAFT_46424 [Serpula lacrymans var.
lacrymans S7.3]
Length = 615
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 172/337 (51%), Gaps = 67/337 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+ LHP L++ ++ GF PTPIQ +P A +G+DI+G AETGSGKTLA+GLPI+
Sbjct: 34 WHSYSLHPHLLQILHHQGFTTPTPIQSKSLPKAM-EGRDIVGVAETGSGKTLAYGLPILH 92
Query: 235 RLLEE-REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN--- 290
LL R + K+ K ++AL++ PTRELALQV+DHL A+ I
Sbjct: 93 HLLSRSRHPSSKV-------------KRQVQALVLAPTRELALQVSDHLNMFARSIEAPI 139
Query: 291 -------------------------------------VRVVPIVGGMSTEKQERLLKARP 313
V + IVGGMS +KQ R++
Sbjct: 140 KEETLDVELSETQQLKDKSKGKNVVSGTAKTFSKPPLVSIAAIVGGMSAQKQRRIIDRGV 199
Query: 314 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 373
++++ TPGRLW+++ + +L +L + +LDEADRM+ENGHF EL +I+ + +
Sbjct: 200 DILIATPGRLWDILEEDDSLAKQLASLRYLILDEADRMVENGHFAELDNILRLTLRLSRF 259
Query: 374 NEGQSEQTQTCV-TVSSLQRKKRQTLVFSATIALSADFRKKLKHGS---LKLKQSVNGLN 429
E Q + Q T +L QT VFSAT LS D ++ LK G + K +
Sbjct: 260 FETQDTEVQAHAETEDAL-----QTFVFSAT--LSKDLQRDLKKGYRPRIGKKGRSKPAS 312
Query: 430 SIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
++E L R R AN ++D++ + + L+ES IE
Sbjct: 313 TLEDLVLRLDFRDANPEVIDISPEGGVVSGLQESKIE 349
>gi|225561194|gb|EEH09475.1| ATP-dependent RNA helicase MAK5 [Ajellomyces capsulatus G186AR]
Length = 771
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 168/302 (55%), Gaps = 30/302 (9%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+ L + + S+ +L F +PTPIQ ACIP A G D++G A TGSGKTLAFG+PI++
Sbjct: 189 WDPLDISAEIQTSLSKLRFAKPTPIQTACIPLIA-SGHDVVGKASTGSGKTLAFGIPILE 247
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGINV 291
L+ R + + GE + KY ALI++PTRELA Q++ H+ + A IN
Sbjct: 248 YYLKNRCEE-PVQHNHGELSSKYPI-----ALILSPTRELAHQLSKHITALCTNAPNINA 301
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
R+ + GG+S +KQ+R+L A ++V+GTPGRLW+++S G L + + F V+DEADR+
Sbjct: 302 RIALLTGGLSVQKQQRVL-ANADIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEADRL 360
Query: 352 IENGHFRELQSIIDMLPMTNGSNE--GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+ GHF+E++ I+ L ++ SE VS RQTLVFSAT
Sbjct: 361 LSEGHFKEVEEILTALDRKEIHDKVTADSESEDDASKVSP-----RQTLVFSAT------ 409
Query: 410 FRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLEESF 463
F K L+ G ++ S+E L ++ R + +D+ V+ +A L+E
Sbjct: 410 FHKGLQQKLAGKGRYFDGDLLDDKQSMEYLLKKLNFREDRPKFIDVNPVAQMAENLKEGL 469
Query: 464 IE 465
+E
Sbjct: 470 VE 471
>gi|224051667|ref|XP_002200206.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Taeniopygia guttata]
Length = 796
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 171/362 (47%), Gaps = 78/362 (21%)
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAE 219
E L + + + AW +L + +++++ LGF PTPIQ +P+A D++GAAE
Sbjct: 181 EVLSASTDQKADVSAWKDLFVPEPVLQALSYLGFSAPTPIQALALPSAIRDNMDVLGAAE 240
Query: 220 TGSGKTLAFGLPIMQRLL----------------------------EEREKAGKML---- 247
TGSGKTLAF +P++ +L E+ ++A K+
Sbjct: 241 TGSGKTLAFAIPMIHSVLQWQKSSNSTTRNDSVSKESHQHHDEPRWEDEDEAEKLTHQQA 300
Query: 248 EEKGEEAEKYAPKGHLRAL-------------------------IITPTRELALQVTDHL 282
E+ G+E + G ++ L ++TPTRELA+QV H+
Sbjct: 301 EDSGDEDDASFTTGCVKVLENVEFDCDDETHTGDSNKKRPLLGLVLTPTRELAVQVKHHI 360
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 342
VAK ++ +VGGM+ +KQER+L +PE+V+ TPGRLWEL+ HL L L
Sbjct: 361 DAVAKFTGIKTAILVGGMAAQKQERVLNRKPEIVIATPGRLWELVKERHPHLSNLRQLRC 420
Query: 343 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 402
V+DEADRM+E GHF EL ++++L N+ Q +RQT VFSA
Sbjct: 421 LVIDEADRMVEKGHFLELSQLLEIL------NDSQ-------------YNPQRQTFVFSA 461
Query: 403 TIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES 462
T+ L ++ K +E L E+ G++ ++DLT L E+
Sbjct: 462 TLTLVHQTPTRVLQKKNAKKMDKK--TKLELLMEKVGIKGKPKVIDLTRKEATVETLTET 519
Query: 463 FI 464
I
Sbjct: 520 RI 521
>gi|240277958|gb|EER41465.1| ATP-dependent RNA helicase MAK5 [Ajellomyces capsulatus H143]
Length = 723
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 168/302 (55%), Gaps = 30/302 (9%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+ L + + S+ +L F +PTPIQ ACIP A G D++G A TGSGKTLAFG+PI++
Sbjct: 137 WDPLDISAEIQTSLSKLRFAKPTPIQTACIPLIA-SGHDVVGKASTGSGKTLAFGIPILE 195
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGINV 291
L+ R + + GE + KY ALI++PTRELA Q++ H+ + A IN
Sbjct: 196 YYLKNRREE-PVQHNDGELSSKYPI-----ALILSPTRELAHQLSKHITALCTNAPNINA 249
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
R+ + GG+S +KQ+R+L A ++V+GTPGRLW+++S G L + + F V+DEADR+
Sbjct: 250 RIALLTGGLSVQKQQRVL-ANADIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEADRL 308
Query: 352 IENGHFRELQSIIDMLPMTNGSNE--GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+ GHF+E++ I+ L ++ SE VS RQTLVFSAT
Sbjct: 309 LSEGHFKEVEEILTALDRKEIHDKVTADSESEDDASKVSP-----RQTLVFSAT------ 357
Query: 410 FRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSVLANKLEESF 463
F K L+ G ++ S+E L ++ R + +D+ V+ +A L+E
Sbjct: 358 FHKGLQQKLAGKGRYFDGDLLDDKQSMEYLLKKLNFREDRPKFIDVNPVAQMAENLKEGL 417
Query: 464 IE 465
+E
Sbjct: 418 VE 419
>gi|156060651|ref|XP_001596248.1| hypothetical protein SS1G_02468 [Sclerotinia sclerotiorum 1980]
gi|160409986|sp|A7EAY2.1|MAK5_SCLS1 RecName: Full=ATP-dependent RNA helicase mak5
gi|154699872|gb|EDN99610.1| hypothetical protein SS1G_02468 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 780
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 178/311 (57%), Gaps = 31/311 (9%)
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAE 219
E L +A E W EL L + ++ ++GF +PTPIQ IP G D++G A
Sbjct: 200 EALDEDAAGEVEVSGWVELDLSSNTLMALSKMGFSKPTPIQSEAIPEVL-AGHDVVGKAS 258
Query: 220 TGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVT 279
TGSGKTLAFG+PI+++ LE G++ E++ +++ + ALI++PTRELA Q+T
Sbjct: 259 TGSGKTLAFGIPIVEKWLE---VYGELDEDELKKSTRPP-----TALILSPTRELAHQLT 310
Query: 280 DHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 337
+H+ + KG+ + V + GG+S +KQ+R L ++ ++++GTPGRLWE++S + L
Sbjct: 311 EHITTLCKGMPTSPYVAAVTGGLSVQKQQRQL-SKADIIIGTPGRLWEVISSSNELSAGL 369
Query: 338 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQT 397
+ F V+DEADR++ +GHF+E + I++ L T+G+ + E T RQT
Sbjct: 370 KQVRFLVIDEADRLLTDGHFKEAEEILNALDRTHGNEDDDEEDT----------LPPRQT 419
Query: 398 LVFSATIALSADFRKKLKHG-SLKLKQSV-NGLNSIETLSERAGMR-ANVAIVDLTNVSV 454
LVFSAT F K L+ + K KQS + S+E L ++ R VD+ +S
Sbjct: 420 LVFSAT------FHKGLQQKLAGKGKQSFKDDSQSMEYLLKKLNFREEKPKFVDVNPISQ 473
Query: 455 LANKLEESFIE 465
+A L+E +E
Sbjct: 474 MAANLKEGMVE 484
>gi|448091200|ref|XP_004197272.1| Piso0_004519 [Millerozyma farinosa CBS 7064]
gi|448095690|ref|XP_004198303.1| Piso0_004519 [Millerozyma farinosa CBS 7064]
gi|359378694|emb|CCE84953.1| Piso0_004519 [Millerozyma farinosa CBS 7064]
gi|359379725|emb|CCE83922.1| Piso0_004519 [Millerozyma farinosa CBS 7064]
Length = 751
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 223/455 (49%), Gaps = 42/455 (9%)
Query: 21 RKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPK 80
+K+ +K + K ++LKW + D + G ELDG + E + + +
Sbjct: 34 KKKLQKGSKIVKADNLKWKEVEIPDNLDDYEGFYGLEELDGVDV---EYENGNIKFIVKD 90
Query: 81 PEKGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGK 140
+K + +K + ++ + D D D + G E + + + K+ K K
Sbjct: 91 GDKVEEKEKKTGDEVTKTEVSATDNDDEDASDFGGFSDDEMDVDGSDSTDVAPIKEAKAK 150
Query: 141 KIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQ 200
++ E+S +N + L I + W L L ++ + +L F +PTPIQ
Sbjct: 151 EVS--EDSELTANTFTNLSVTLPDPNSI--DLPHWKPLSLSAYTLQGLQQLKFSKPTPIQ 206
Query: 201 KACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK 260
K IP A +G+D +G A TGSGKTLA+G+PI++R L ++A + + ++ +P
Sbjct: 207 KKAIPYAL-EGRDTVGKAVTGSGKTLAYGIPILERYLTRLQQA----QTHSKTSKISSPA 261
Query: 261 GHLRALIITPTRELALQVTDHLKEVAKGINV---RVVPIVGGMSTEKQERLLKARPELVV 317
G +I PTRELA QV DHLKE+AK +V + GG+S +KQERLL+ P +VV
Sbjct: 262 G----IIFAPTRELAHQVVDHLKELAKYFPFPPNAIVSMTGGLSIQKQERLLEKGPGIVV 317
Query: 318 GTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQ 377
TPGR E++ EK++ +L VLDEADR++++GHF E + +++L + +++ +
Sbjct: 318 TTPGRFLEILQSDEKYVTQLSGCDIVVLDEADRLLQDGHFEEFEKALELLSKSRKNSKAK 377
Query: 378 SEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL------KHGSLKLKQSVNGLNSI 431
S + QTLV+SAT S D KL K K V+ I
Sbjct: 378 SW--------------RWQTLVYSAT--FSKDLFSKLDKNPRRKETFDSSKSLVDNTEII 421
Query: 432 ETLSERAGMRANV-AIVDLTNVSVLANKLEESFIE 465
L+ + R + A+VD ++A ++ E+ +E
Sbjct: 422 TLLNSKLKFRDSAPALVDANPKEIVAGQITEALVE 456
>gi|116202351|ref|XP_001226987.1| hypothetical protein CHGG_09060 [Chaetomium globosum CBS 148.51]
gi|88177578|gb|EAQ85046.1| hypothetical protein CHGG_09060 [Chaetomium globosum CBS 148.51]
Length = 1002
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 163/294 (55%), Gaps = 27/294 (9%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L L P ++ SI RL F +PT IQ IP + G D++G A TGSGKTLAFG+PI++
Sbjct: 200 WVPLDLSPQILSSIARLKFAKPTAIQARAIPQIMN-GHDVVGKAATGSGKTLAFGIPIVE 258
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--R 292
L +R + + AEK P A+I++PTRELA Q+ DHLK + G+
Sbjct: 259 SWLAKRAE--------NQTAEKKGPI----AMILSPTRELAHQICDHLKLLCAGLTTGPY 306
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+ + GG++ +KQ+R L+ R ++VVGTPGR+WELMS L L + F V+DEADR++
Sbjct: 307 ICSVTGGLAVQKQQRQLE-RADIVVGTPGRMWELMSSSNSVLGSLRGIDFLVVDEADRLL 365
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 412
++GHF++ + I+ + T E + R RQTLVFSAT + + ++
Sbjct: 366 KDGHFKDAEEILKAIDRTVPGEEADGDSDDEA------PRHHRQTLVFSAT--FNKNLQQ 417
Query: 413 KLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
KL G + + + S+E L ++ R VD +S +A L+E I+
Sbjct: 418 KLA-GKARFNLTSD-TESLEYLLKKLNFREERPKFVDTNPISQMAENLKEGLIQ 469
>gi|425778251|gb|EKV16391.1| ATP dependent RNA helicase, putative [Penicillium digitatum Pd1]
gi|425780471|gb|EKV18477.1| ATP dependent RNA helicase, putative [Penicillium digitatum PHI26]
Length = 771
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 146/244 (59%), Gaps = 19/244 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AW+ L L P ++ ++ F P+ IQKA IPA G D++G A TGSGKTLAFG+PI+
Sbjct: 193 AWDGLNLSPETFTALSKMKFSSPSAIQKASIPAIL-DGHDVVGKASTGSGKTLAFGIPII 251
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---AKGIN 290
+ L++R GK+ E+ + +P ALI++PTRELA Q+ H+ ++ + N
Sbjct: 252 EHYLDKR---GKLREQSDTSEQNKSPI----ALILSPTRELAHQLGKHIGDLIANSPDTN 304
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
R+ + GGMS +KQ+R L A ++VVGTPGR+WE++S G + ++ + F V+DEADR
Sbjct: 305 ARIALVTGGMSIQKQQRQL-ATADIVVGTPGRVWEILSTGTGLIRKMQKIQFLVVDEADR 363
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
++ GHF+E++ I+D L + +Q + S RQTLVFSAT D
Sbjct: 364 LLSEGHFKEVEDILDALDKHQAGDIADVDQEEEEEQPS-----HRQTLVFSAT--FHKDL 416
Query: 411 RKKL 414
++KL
Sbjct: 417 QQKL 420
>gi|397573945|gb|EJK48944.1| hypothetical protein THAOC_32221 [Thalassiosira oceanica]
Length = 980
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 163/272 (59%), Gaps = 15/272 (5%)
Query: 108 GDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAE 167
G D+ G+ + + LK + K++ K++K K + ++ S D ++++ + A
Sbjct: 181 GKPDDPFQGLSRRERVRLKRKLKKEQVKERKRLKREGLQSSKNSDAKTDGSKDDEAAVAS 240
Query: 168 ISTEFD-AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
+ T + + + LH L + ++ L + PTPIQ + +PAA +DI+GAA TGSGKTL
Sbjct: 241 LQTTWSISAPGVTLHETLSRGLHSLKYSYPTPIQASTLPAAILGRRDIVGAAPTGSGKTL 300
Query: 227 AFGLPIMQRLLEERE-----KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 281
++GLPI+Q LL+ER+ G E E + L+ALI+TPTRELALQVT
Sbjct: 301 SYGLPILQYLLDERDASASRSCGVATPESTRE------RLPLQALILTPTRELALQVTSE 354
Query: 282 LKEVAKGINVRVVPIVGGMSTEKQERLL-KARPELVVGTPGRLWELMSGGE-KHLVELHT 339
L++V+ +V++ IVGG + KQ+R L K RP ++V TPGRLWELMS + +HL +L
Sbjct: 355 LQKVSCN-SVKIGTIVGGFAEVKQQRTLNKVRPPVLVATPGRLWELMSSKDYEHLNDLTQ 413
Query: 340 LSFFVLDEADRMIENGHFRELQSIIDMLPMTN 371
L F +DEADRMI+ G F +L+ I +++ N
Sbjct: 414 LRFLCVDEADRMIKQGSFPQLRQIFELIDAAN 445
>gi|242764605|ref|XP_002340809.1| ATP dependent RNA helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218724005|gb|EED23422.1| ATP dependent RNA helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 765
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 210/439 (47%), Gaps = 56/439 (12%)
Query: 61 GGFLSLEEIDEASYNLQIPKPE-----KGKPGKKTNTKK-RKRSSANEEDPGDGDGDEDG 114
GGF LEEID + I KPE K K TK K++ +E P D + G
Sbjct: 53 GGFFGLEEID----GVDIIKPESSGQIKFKVAADKPTKSILKKTEHADETPNDNIEEWSG 108
Query: 115 NGVQKEQE------------------KNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPD 156
+EQE KN ++K KK+++ K + + + P
Sbjct: 109 FSDGEEQEVEAQKKQKTKKKSEYAKQKNPADEKKPAAKKEQRQPNAKGGKPDEKIQSLPF 168
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIG 216
A L E E + AW+ L L P L S+ +L F P+ IQ+A IP G D++G
Sbjct: 169 TA---LDEEVEDEVDVSAWDSLGLSPALQTSLSKLKFSTPSTIQQAVIPEVL-AGHDVVG 224
Query: 217 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELAL 276
A TGSGKTLAFG+PI++ L R + G E+K +E++ A LI++PTRELA
Sbjct: 225 KASTGSGKTLAFGIPILEYYLGTRGQHGTPKEKKKKESQPIA-------LILSPTRELAH 277
Query: 277 QVTDH---LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 333
Q+ H L N R+ + GG++ +KQ+RLL A ++V+GTPGR+WE++S G
Sbjct: 278 QLAKHIGTLNSHTPAANARIALLTGGLAIQKQQRLL-ADADIVIGTPGRVWEILSSGTGL 336
Query: 334 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT-NGSNEGQSEQTQTCVTVSSLQR 392
+ + + + VLDEADR++ +GH++EL+ I+D L + S
Sbjct: 337 IQRMSRVKYLVLDEADRLLSDGHYKELEEILDALDRKEDNEEAEDSPSESEEDEEKEDAT 396
Query: 393 KKRQTLVFSATIALSADFRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMR-ANVAI 446
RQTLVFSAT F K L+ G +N S+E L + R
Sbjct: 397 VARQTLVFSAT------FHKGLQQKLSGKGKFMSSDLMNKSESMEYLLRKLKFREEKPKF 450
Query: 447 VDLTNVSVLANKLEESFIE 465
+D+ +S +A L+E +E
Sbjct: 451 IDVNPISQMAQGLKEGILE 469
>gi|330926678|ref|XP_003301562.1| hypothetical protein PTT_13094 [Pyrenophora teres f. teres 0-1]
gi|311323563|gb|EFQ90355.1| hypothetical protein PTT_13094 [Pyrenophora teres f. teres 0-1]
Length = 827
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/299 (39%), Positives = 172/299 (57%), Gaps = 32/299 (10%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AW+EL L ++ ++ +L F +PT IQK+ IP G+D+IG A TGSGKTLAFG+PI+
Sbjct: 259 AWDELELSEEMLGALAKLKFSKPTTIQKSTIPEIL-AGRDVIGKASTGSGKTLAFGIPII 317
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV-AKGI--N 290
+ L R A K E+K ALII PTRELA Q+ HL + AKG
Sbjct: 318 ESYLASRSSASKDPEDK-----------MPIALIIAPTRELAHQINAHLIALCAKGDFDP 366
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+ I GG+S +KQ R L+ + ++VVGTPGRLWE++S G+ L + + F V+DEADR
Sbjct: 367 PYITSITGGLSVQKQRRQLE-KADIVVGTPGRLWEVISDGQGLLRKFKQIKFLVVDEADR 425
Query: 351 MIENGHFRELQSIIDMLPMTNGSNE-GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+ GHF+E+ I+ +L + ++E +S++ + KRQTLVFSAT D
Sbjct: 426 LFSEGHFKEMGEILKVLEPDDVTDENAESDEKEEI---------KRQTLVFSAT--FGKD 474
Query: 410 FRKKLKHGSLKLKQS--VNGLNSIETLSERAGMRANVAI-VDLTNVSVLANKLEESFIE 465
+KKL G +K S ++ S+E L ++ R + +D +S +A+KL+E IE
Sbjct: 475 LQKKLA-GKVKGGGSDLMSQQQSMEYLLKKLQFREEKPVFIDANPMSQMASKLQEGLIE 532
>gi|27882644|gb|AAH43900.1| LOC398446 protein, partial [Xenopus laevis]
Length = 660
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 174/358 (48%), Gaps = 72/358 (20%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
+E L + + + AW L + +++K++ LGF PTPIQ +P+A DI+GA
Sbjct: 183 SENALAHTSSKNADVSAWKNLHVPKVVLKALSFLGFTCPTPIQALALPSAIRDKMDILGA 242
Query: 218 AETGSGKTLAFGLPIMQRLLE--EREKAGKMLEEKGEE---------------------- 253
AETGSGKTLAF +P++ +LE + +++G E EE
Sbjct: 243 AETGSGKTLAFAIPMIHSILEWQKHQESGAAEGETKEEPTSDVNNEIDATEKQEQDMSEN 302
Query: 254 ------------------------AEKYAPKGHLRALI---ITPTRELALQVTDHLKEVA 286
+ K G R L+ +TPTRELA+QV H+ VA
Sbjct: 303 EDVEQVEDNDDVSENFDINFNDMSSSKSGTWGKERPLLGLVVTPTRELAVQVKHHIDAVA 362
Query: 287 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
K ++ IVGGM+++KQ+RLL RPE+V+ TPGRLWEL+ HL L L V+D
Sbjct: 363 KFTGIKTAIIVGGMASQKQQRLLGRRPEIVIATPGRLWELIGERHPHLCNLRRLRCLVID 422
Query: 347 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 406
EADRM+E GH+ EL ++++L + + KRQT VFSAT+ L
Sbjct: 423 EADRMVEKGHYAELSQLLELLSEVHYN-------------------PKRQTFVFSATLTL 463
Query: 407 SADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
+L K Q V+ + + +L E+ GM+A ++DLT L E+ I
Sbjct: 464 IHQAPTRLLQK--KRFQKVDKDSKLVSLMEKIGMKAKPKVIDLTRKQATVETLTETRI 519
>gi|17507641|ref|NP_491652.1| Protein F55F8.2, isoform a [Caenorhabditis elegans]
gi|351063669|emb|CCD71883.1| Protein F55F8.2, isoform a [Caenorhabditis elegans]
Length = 746
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 165/300 (55%), Gaps = 35/300 (11%)
Query: 170 TEFDAWNELRLHP-LLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
T+ AW + P ++++I ++GF EPT IQ A +PAA +D++GAAETGSGKTLAF
Sbjct: 151 TDISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAF 210
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 288
G+P++ RLLE + + ++ E E P RALI+ PTREL +Q+ H+ +
Sbjct: 211 GIPLVARLLESSDDS-----QETESTEVRGP----RALIVAPTRELVIQIMKHINALIST 261
Query: 289 INVRVVPIVGGMSTEKQERLL-KARPELVVGTPGRLWELMSGGE--KHLVELHTLSFFVL 345
+ IVGG++ KQER++ + RP++VV TPGRLW +M E + L E L V+
Sbjct: 262 TQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVV 321
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
DE DRM+E G+F EL I++ + +SE ++K QTLVFSAT+
Sbjct: 322 DETDRMVEEGYFAELTHILNKI-------HEESE------------KEKLQTLVFSATLT 362
Query: 406 LSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANV-AIVDLTNVSVLANKLEESFI 464
+ + + K + ++ I+ L + G+R N ++DLT A L E+ I
Sbjct: 363 FAK--AQDVAEEEKKKAKELSSQQKIQRLIKLTGLRENKHKVIDLTRQMGTAGCLVEARI 420
>gi|406859182|gb|EKD12251.1| DEAD/DEAH box helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 762
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 173/312 (55%), Gaps = 37/312 (11%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
EE+ V E T+ AW EL L P + ++ +LGF++PT IQ + IP G D++G A
Sbjct: 186 EEDAVEE---ETDVSAWTELDLSPDTLSALSKLGFQKPTLIQSSAIPEIM-AGHDVVGKA 241
Query: 219 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQV 278
TGSGKTLAFG+PI++ +E G++ E+ E + P ALI++PTRELA Q+
Sbjct: 242 STGSGKTLAFGIPILESWIE---TYGQLDED---ELKASRPP---TALILSPTRELAHQL 292
Query: 279 TDHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 336
T+H+ + KG+ V + GG+S +KQ+R L A+ ++V+GTPGRLWE+MS +
Sbjct: 293 TEHITALCKGLPSAPYVAAVTGGLSVQKQQRQL-AKADIVIGTPGRLWEVMSSSIELTAA 351
Query: 337 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 396
+ F V+DEADR++ GHFRE + II GS + Q + + V + RQ
Sbjct: 352 FKKIKFLVVDEADRLLTEGHFREAEQII-------GSLDRQQDADEDDEIVPT-----RQ 399
Query: 397 TLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRAN-VAIVDLTNVS 453
TLVFSAT L K K G + + S+E L ++ R + VD+ +S
Sbjct: 400 TLVFSATFHKGLQQKLAGKGKQGLM------DDSESMEYLLKKLNFREDKPKFVDVNPIS 453
Query: 454 VLANKLEESFIE 465
+A L+E +E
Sbjct: 454 QMAEGLKEGMVE 465
>gi|85086234|ref|XP_957656.1| hypothetical protein NCU04041 [Neurospora crassa OR74A]
gi|74662508|sp|Q7RZH4.1|MAK5_NEUCR RecName: Full=ATP-dependent RNA helicase mak-5
gi|28918750|gb|EAA28420.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|39979232|emb|CAE85602.1| related to ATP-dependent RNA helicase [Neurospora crassa]
Length = 805
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 163/307 (53%), Gaps = 34/307 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L L P ++ SI +L F +PT IQ IP G D+IG A TGSGKTLAFG+P+++
Sbjct: 211 WVPLDLSPRMISSIAKLRFSKPTVIQSKAIPEI-MAGHDVIGKASTGSGKTLAFGIPVIE 269
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--R 292
L E + EE+ KG ALI++PTRELA Q+ DHL+ + KG+
Sbjct: 270 SWLSAAETRKQNKEER---------KGAT-ALILSPTRELAQQIRDHLQALCKGLPTAPY 319
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+ ++GGM+ +KQ+R L+ ++V+ TPGR+WE+MS L L +SF VLDEADR++
Sbjct: 320 ICSVLGGMAVQKQKRQLQV-ADIVIATPGRMWEVMSSDNSVLASLRNISFLVLDEADRLL 378
Query: 353 ENGHFRELQSIIDML--PMTNGSNEGQ-------------SEQTQTCVTVSSLQRKKRQT 397
++GHF+E + I L P +NE Q E ++ KRQT
Sbjct: 379 KDGHFKEAEEIFKALDRPPVEENNEDQKMGGTDEEGQEEEEEDSEEEEEEEEEHVNKRQT 438
Query: 398 LVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLAN 457
L+FSAT + + ++KL G K K + +E L ++ R VD V +A
Sbjct: 439 LIFSAT--FNKNLQQKLA-GKSKFKAT--STQDMEYLLQKLNFRETPKFVDANPVHQMAE 493
Query: 458 KLEESFI 464
L+E I
Sbjct: 494 NLKEGLI 500
>gi|147904244|ref|NP_001082400.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Xenopus laevis]
gi|50418383|gb|AAH77543.1| LOC398446 protein [Xenopus laevis]
Length = 706
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 174/358 (48%), Gaps = 72/358 (20%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
+E L + + + AW L + +++K++ LGF PTPIQ +P+A DI+GA
Sbjct: 94 SENALAHTSSKNADVSAWKNLHVPKVVLKALSFLGFTCPTPIQALALPSAIRDKMDILGA 153
Query: 218 AETGSGKTLAFGLPIMQRLLE--EREKAGKMLEEKGEE---------------------- 253
AETGSGKTLAF +P++ +LE + +++G E EE
Sbjct: 154 AETGSGKTLAFAIPMIHSILEWQKHQESGAAEGETKEEPTSDVNNEIDATEKQEQDMSEN 213
Query: 254 ------------------------AEKYAPKGHLRALI---ITPTRELALQVTDHLKEVA 286
+ K G R L+ +TPTRELA+QV H+ VA
Sbjct: 214 EDVEQVEDNDDVSENFDINFNDMSSSKSGTWGKERPLLGLVVTPTRELAVQVKHHIDAVA 273
Query: 287 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
K ++ IVGGM+++KQ+RLL RPE+V+ TPGRLWEL+ HL L L V+D
Sbjct: 274 KFTGIKTAIIVGGMASQKQQRLLGRRPEIVIATPGRLWELIGERHPHLCNLRRLRCLVID 333
Query: 347 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 406
EADRM+E GH+ EL ++++L + + KRQT VFSAT+ L
Sbjct: 334 EADRMVEKGHYAELSQLLELLSEVHYN-------------------PKRQTFVFSATLTL 374
Query: 407 SADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
+L K Q V+ + + +L E+ GM+A ++DLT L E+ I
Sbjct: 375 IHQAPTRLLQK--KRFQKVDKDSKLVSLMEKIGMKAKPKVIDLTRKQATVETLTETRI 430
>gi|393212749|gb|EJC98248.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 718
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 147/256 (57%), Gaps = 35/256 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W++ LH L+ +++ F PTPIQ++ IP A +GKD++G A+TGSGKTLA+GLPI+
Sbjct: 120 WSDFSLHARLLSALHSQKFATPTPIQRSAIPVAL-KGKDVVGVAQTGSGKTLAYGLPILN 178
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAK----- 287
LL+ G+ PKG L+AL++ PTRELALQVT+HLK
Sbjct: 179 HLLQ----MGR-------------PKGKRPLQALVLAPTRELALQVTEHLKACVVEDAER 221
Query: 288 ---GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
V + +VGGM+ +KQ R+++ +++V TPGRLW+L+ +L TL F V
Sbjct: 222 RTGAPRVSIGTVVGGMAIQKQIRIIERGVDILVATPGRLWDLIEEDNSLSEQLRTLRFLV 281
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE----QTQT-CVTVSSLQRKKRQTLV 399
LDEADRMIE GHF EL +II + + S E +T+T S + QT +
Sbjct: 282 LDEADRMIETGHFAELDNIIRLTTRQSKSTETDEAFMFGETETRGKNDESNEETPMQTFI 341
Query: 400 FSATIALSADFRKKLK 415
FSAT LS D ++ LK
Sbjct: 342 FSAT--LSRDLQQNLK 355
>gi|154274552|ref|XP_001538127.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|160409985|sp|A6R9U4.1|MAK5_AJECN RecName: Full=ATP-dependent RNA helicase MAK5
gi|150414567|gb|EDN09929.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 772
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 175/319 (54%), Gaps = 30/319 (9%)
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIG 216
+A EE V E+ + W+ L + + S+ +L F +PTPIQ ACIP A G D++G
Sbjct: 173 EALEEEVDGDEV--DVSGWDPLGISAEIQTSLSKLRFAKPTPIQTACIPLIA-SGHDVVG 229
Query: 217 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELAL 276
A TGSGKTLAFG+PI++ L+ R + + E + KY ALI++PTRELA
Sbjct: 230 KASTGSGKTLAFGIPILEYYLKNRREE-PVQHNDAELSSKYPI-----ALILSPTRELAH 283
Query: 277 QVTDHLKEV---AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 333
Q++ H+ + A IN R+ + GG+S +KQ+R+L A ++V+GTPGRLW+++S G
Sbjct: 284 QLSKHITALCTNAPNINARIALLTGGLSVQKQQRVL-ANADIVIGTPGRLWDVISTGHGL 342
Query: 334 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 393
L + + F V+DEADR++ GHF+E++ I+ L E + T + R+
Sbjct: 343 LRKFQNIKFLVIDEADRLLSEGHFKEVEEILTAL----DRKEIHHKVTADSESEDDASRE 398
Query: 394 K-RQTLVFSATIALSADFRKKLKH-----GSLKLKQSVNGLNSIETLSERAGMRANVA-I 446
RQTLVFSAT F K L+ G ++ S+E L ++ R +
Sbjct: 399 SPRQTLVFSAT------FHKGLQQKLAGKGRYFDGDLLDDKQSMEYLLKKLNFREDRPKF 452
Query: 447 VDLTNVSVLANKLEESFIE 465
+D+ V+ +A L+E +E
Sbjct: 453 IDVNPVAQMAENLKEGLVE 471
>gi|350286853|gb|EGZ68100.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 777
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 156/292 (53%), Gaps = 29/292 (9%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L L P ++ SI +L F +PT IQ IP G D+IG A TGSGKTLAFG+P+++
Sbjct: 208 WVPLDLSPRMISSIAKLRFSKPTVIQSKAIPEI-MAGHDVIGKASTGSGKTLAFGIPVIE 266
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--R 292
L E + EE+ KG ALI++PTRELA Q+ DHL+ + KG+
Sbjct: 267 SWLSAAETRKQNKEER---------KGAT-ALILSPTRELAQQIRDHLQALCKGLPTAPY 316
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+ ++GGM+ +KQ+R L+ ++V+ TPGR+WE+MS L L +SF VLDEADR++
Sbjct: 317 ICSVLGGMAVQKQKRQLQV-ADIVIATPGRMWEVMSSDNSVLASLRNISFLVLDEADRLL 375
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 412
++GHF+E + I L + KRQTL+FSAT + + ++
Sbjct: 376 KDGHFKEAEEIFKAL----------DRPPEEEEEEEEEHVNKRQTLIFSAT--FNKNLQQ 423
Query: 413 KLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
KL G K K + +E L ++ R VD V +A L+E I
Sbjct: 424 KLA-GKSKFKAT--STQDMEYLLQKLNFRETPKFVDANPVHQMAENLKEGLI 472
>gi|347831310|emb|CCD47007.1| hypothetical protein [Botryotinia fuckeliana]
Length = 774
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 174/312 (55%), Gaps = 35/312 (11%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
EE+ E ++S+ W EL L + ++ ++GF +PTPIQ IP G D++G A
Sbjct: 197 EEDAAKEVDVSS----WEELDLSSNTLSALSKMGFSKPTPIQSEAIPEVL-AGHDVVGKA 251
Query: 219 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQV 278
TGSGKTLAFG+PI+++ LE A L+E + P ALI++PTRELA Q+
Sbjct: 252 STGSGKTLAFGIPIVEKWLE----AYGELDEDELKKNTRPPT----ALILSPTRELAHQL 303
Query: 279 TDHLKEVAKGINVR--VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 336
T+H+ + KG+ V + GG+S +KQ+R L A+ ++++GTPGRLWE++S +
Sbjct: 304 TEHITALCKGMPTSPWVAAVTGGLSVQKQQRQL-AKADIIIGTPGRLWEVISSSNELSAS 362
Query: 337 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 396
L + F V+DEADR++ +GHF+E + I++ L T+G + + RQ
Sbjct: 363 LKQVRFLVIDEADRLLTDGHFKEAEEILNALDRTHGDED----------DEEEDELPPRQ 412
Query: 397 TLVFSATIALSADFRKKLKHG-SLKLKQSV-NGLNSIETLSERAGMR-ANVAIVDLTNVS 453
TLVFSAT F K L+ + K KQS + S+E L ++ R VD+ +S
Sbjct: 413 TLVFSAT------FHKGLQQKLAGKGKQSFKDESQSMEYLLKKLNFREEKPKFVDVNPIS 466
Query: 454 VLANKLEESFIE 465
+A L+E +E
Sbjct: 467 QMAANLKEGMVE 478
>gi|310800598|gb|EFQ35491.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 777
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 172/324 (53%), Gaps = 33/324 (10%)
Query: 155 PDDAEEEL--------VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPA 206
PDDA+ E V +A+ + W +L L P L+ +I +L F +PT IQ + IP
Sbjct: 179 PDDAKLESSGFAALEEVQDADEDLDMTPWVDLGLSPALVAAIAKLKFAKPTNIQSSTIPD 238
Query: 207 AAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRAL 266
G D+IG A TGSGKTLAF +PI++ +++ + G GE K P AL
Sbjct: 239 IL-AGHDVIGKASTGSGKTLAFSIPIVEEWVDKHDGDGNA---DGERPSK--PDNTPFAL 292
Query: 267 IITPTRELALQVTDHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLW 324
I++PTRELA Q+T+H+K + G+ V + GG+S KQ+R L A+ ++V+GTPGRLW
Sbjct: 293 ILSPTRELAHQITNHIKNLCAGLLNAPFVCSVTGGLSVFKQQRQL-AKADIVIGTPGRLW 351
Query: 325 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTC 384
E++SG + L + + V+DEADR++ GHF+E I+D L +EG+ +
Sbjct: 352 EVISGSRELLAGFRKIRYLVVDEADRLLSEGHFKEAGQILDALDREVIEDEGEDYDNEKG 411
Query: 385 VTVSSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR- 441
++ RQTLVFSAT L K K G + K+ S+E L ++ R
Sbjct: 412 LS-------DRQTLVFSATFHQGLQQKLAGKGKWGLMSEKE------SMEYLLKKLNFRE 458
Query: 442 ANVAIVDLTNVSVLANKLEESFIE 465
+D+ +A L+E IE
Sbjct: 459 EKPKFIDVNPAKQMAAGLKEGLIE 482
>gi|406696280|gb|EKC99572.1| ATP dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 779
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 162/307 (52%), Gaps = 36/307 (11%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AW ++ LH L K + LGF PT IQK +P A +G+D++G AET TLA+ LP++
Sbjct: 177 AWAKIPLHASLKKCLLGLGFANPTEIQKQAVPLAL-EGRDVVGVAET----TLAYSLPVL 231
Query: 234 QRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-- 290
LL + +AGK K L ALI+ PTRELA+QVTDHL V K +
Sbjct: 232 SYLLRQPPPRAGK--------------KRPLSALILCPTRELAIQVTDHLTNVVKSVTPE 277
Query: 291 ------VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
+ V +VGG+S KQ R+L +++V TPGRLW+L+ + L TL F +
Sbjct: 278 GAKVPRISVGSVVGGLSAHKQRRILDRGADILVATPGRLWDLVKTDDALAASLRTLRFLI 337
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ----RKKRQTLVF 400
+DEADRMIENGHF EL+ I+ + T E + + ++L+ R QT VF
Sbjct: 338 VDEADRMIENGHFAELEHIVQLSRRTQVQAEDEDDDPVFAQMATALEQAEPRDDLQTFVF 397
Query: 401 SATIALSADFRKKLKHGSLKLKQSVNGLNS-IETLSERAGMRANV-AIVDLTNVSVLANK 458
SAT LS D ++ LK + + + S ++ L E R AIVDLT +
Sbjct: 398 SAT--LSKDLQENLKKRRRRPLKRKSKRASTLDELLETLDFRDETPAIVDLTPKGNKVST 455
Query: 459 LEESFIE 465
L E+ ++
Sbjct: 456 LREAMVD 462
>gi|154314076|ref|XP_001556363.1| hypothetical protein BC1G_04981 [Botryotinia fuckeliana B05.10]
Length = 490
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 173/312 (55%), Gaps = 35/312 (11%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
EE+ E ++S+ W EL L + ++ ++GF +PTPIQ IP G D++G A
Sbjct: 197 EEDAAKEVDVSS----WEELDLSSNTLSALSKMGFSKPTPIQSEAIPEVL-AGHDVVGKA 251
Query: 219 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQV 278
TGSGKTLAFG+PI+++ LE A L+E + P ALI++PTRELA Q+
Sbjct: 252 STGSGKTLAFGIPIVEKWLE----AYGELDEDELKKNTRPP----TALILSPTRELAHQL 303
Query: 279 TDHLKEVAKGINVR--VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 336
T+H+ + KG+ V + GG+S +KQ+R L A+ ++++GTPGRLWE +S +
Sbjct: 304 TEHITALCKGMPTSPWVAAVTGGLSVQKQQRQL-AKADIIIGTPGRLWEGISSSNELSAS 362
Query: 337 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 396
L + F V+DEADR++ +GHF+E + I++ L T+G + + RQ
Sbjct: 363 LKQVRFLVIDEADRLLTDGHFKEAEEILNALDRTHGDED----------DEEEDELPPRQ 412
Query: 397 TLVFSATIALSADFRKKLKHG-SLKLKQSV-NGLNSIETLSERAGMR-ANVAIVDLTNVS 453
TLVFSAT F K L+ + K KQS + S+E L ++ R VD+ +S
Sbjct: 413 TLVFSAT------FHKGLQQKLAGKGKQSFKDESQSMEYLLKKLNFREEKPKFVDVNPIS 466
Query: 454 VLANKLEESFIE 465
+A L+E +E
Sbjct: 467 QMAANLKEGMVE 478
>gi|451851184|gb|EMD64485.1| hypothetical protein COCSADRAFT_37068 [Cochliobolus sativus ND90Pr]
Length = 823
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 174/320 (54%), Gaps = 38/320 (11%)
Query: 151 VSNGP-DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
++N P DD++EE VS AW +L L ++ ++ +L F +PT IQ + IP
Sbjct: 238 LANQPMDDSDEEDVS---------AWGKLDLSEEMLGALAKLKFSKPTNIQTSTIPEII- 287
Query: 210 QGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIIT 269
G+D+IG A TGSGKTLAFG+PI++ L G A K ALII
Sbjct: 288 AGRDVIGKASTGSGKTLAFGIPIIESYL------------AGRAAPKDTKDKVPLALIIA 335
Query: 270 PTRELALQVTDHL-KEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWEL 326
PTRELA Q+ +HL K AKG + + I GG+S +KQ R L+ + ++VVGTPGRLWE+
Sbjct: 336 PTRELAHQINEHLVKLCAKGDFDSPYIASITGGLSVQKQRRQLE-KADIVVGTPGRLWEV 394
Query: 327 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT 386
+S G+ L + + F V+DEADR++ GHF+E+ I+ +L + +E +E +T
Sbjct: 395 ISSGQGLLAKFKQIKFLVVDEADRLLSQGHFKEMDDILKVLEPDDEVDE-NAEPAET--- 450
Query: 387 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVA 445
RQTLVFSAT D ++KL + +N S+E L ++ R
Sbjct: 451 ----PEANRQTLVFSAT--FGKDLQRKLAGKAKFGGDQMNQQQSMEYLLKKLRFREEKPK 504
Query: 446 IVDLTNVSVLANKLEESFIE 465
+D S +A+KL+E IE
Sbjct: 505 FIDANPTSQMASKLQEGLIE 524
>gi|336466285|gb|EGO54450.1| hypothetical protein NEUTE1DRAFT_87798 [Neurospora tetrasperma FGSC
2508]
Length = 808
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 163/313 (52%), Gaps = 40/313 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L L P ++ SI +L F +PT IQ IP G D+IG A TGSGKTLAFG+P+++
Sbjct: 208 WVPLDLSPRMISSIAKLRFSKPTVIQSKAIPEI-MAGHDVIGKASTGSGKTLAFGIPVIE 266
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--R 292
L E + EE+ KG ALI++PTRELA Q+ DHL+ + KG+
Sbjct: 267 SWLSAAETRKQNKEER---------KGAT-ALILSPTRELAQQIRDHLQALCKGLPTAPY 316
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+ ++GGM+ +KQ+R L+ ++V+ TPGR+WE+MS L L +SF VLDEADR++
Sbjct: 317 ICSVLGGMAVQKQKRQLQV-ADIVIATPGRMWEVMSSDNSVLASLRNISFLVLDEADRLL 375
Query: 353 ENGHFRELQSIIDML--PMTNGSNEGQ-------------------SEQTQTCVTVSSLQ 391
++GHF+E + I L P +NE Q E+ +
Sbjct: 376 KDGHFKEAEEIFKALDRPPVEENNEDQKMGGTDEEGQEEEEEDSEEEEEEEEEEEEEEEH 435
Query: 392 RKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTN 451
KRQTL+FSAT + + ++KL G K K + +E L ++ R VD
Sbjct: 436 VNKRQTLIFSAT--FNKNLQQKLA-GKSKFKAT--STQDMEYLLQKLNFRETPKFVDANP 490
Query: 452 VSVLANKLEESFI 464
V +A L+E I
Sbjct: 491 VHQMAENLKEGLI 503
>gi|401883813|gb|EJT48000.1| ATP dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 779
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 161/307 (52%), Gaps = 36/307 (11%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AW ++ LH L K + LGF PT IQK +P A +G+D++G AET TLA+ LP++
Sbjct: 177 AWAKIPLHASLKKCLLGLGFANPTEIQKQAVPLAL-EGRDVVGVAET----TLAYSLPVL 231
Query: 234 QRLLEERE-KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-- 290
LL + +AGK K L ALI+ PTRELA+QVTDHL V K +
Sbjct: 232 SYLLRQPPPRAGK--------------KRPLSALILCPTRELAIQVTDHLTNVVKSVTPE 277
Query: 291 ------VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
+ V +VGG+S KQ R+L +++V TPGRLW+L+ + L TL F +
Sbjct: 278 GAKVPRISVGSVVGGLSAHKQRRILDRGADILVATPGRLWDLVKTDDALAASLRTLRFLI 337
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ----RKKRQTLVF 400
+DEADRMIENGHF EL+ I+ + T E + + ++L+ R QT VF
Sbjct: 338 VDEADRMIENGHFAELEHIVQLSRRTQVQAEDEDDDPVFAQMATALEQAEPRDDLQTFVF 397
Query: 401 SATIALSADFRKKLKHGSLKLKQSVNGLNS-IETLSERAGMRANV-AIVDLTNVSVLANK 458
SAT LS D ++ LK + + S ++ L E R AIVDLT +
Sbjct: 398 SAT--LSKDLQENLKKRRRRPLKRKGKRASTLDELLETLDFRDETPAIVDLTPKGNKVST 455
Query: 459 LEESFIE 465
L E+ ++
Sbjct: 456 LREAMVD 462
>gi|302676285|ref|XP_003027826.1| hypothetical protein SCHCODRAFT_70633 [Schizophyllum commune H4-8]
gi|300101513|gb|EFI92923.1| hypothetical protein SCHCODRAFT_70633 [Schizophyllum commune H4-8]
Length = 651
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 144/262 (54%), Gaps = 37/262 (14%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC-IPAAAHQGKDIIGAAETGSGKT 225
+ T + W LHP L+K++ F +PTPIQ A IPA A G+D++G A+TGSGKT
Sbjct: 72 DTPTSLEEWEPYALHPQLLKTLQARNFLKPTPIQAAALIPALA--GRDVVGVAQTGSGKT 129
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
LA+GLPI+ LLE K+ GE K +RALI+ PTRELALQV+ HL
Sbjct: 130 LAYGLPILHHLLENPHKSTT-----GE-------KRPVRALILAPTRELALQVSSHLNAC 177
Query: 286 AKGIN------------VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 333
+ V V +VGGMS +KQ+R+L +++V TPGRLW+++ +
Sbjct: 178 LNTNSDAQTNAKKPPPPVSVAALVGGMSLQKQKRILGRGVDVLVATPGRLWDVIQEDDDL 237
Query: 334 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 393
+ L F VLDEADRMIE GHF EL +++ + N +E + + +
Sbjct: 238 ARSIKNLKFLVLDEADRMIEAGHFAELDNVLRLTLRANKYDEREDDDENI--------QD 289
Query: 394 KRQTLVFSATIALSADFRKKLK 415
QT VFSAT LS D ++ LK
Sbjct: 290 GLQTFVFSAT--LSKDLQRNLK 309
>gi|393245470|gb|EJD52980.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 736
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 145/276 (52%), Gaps = 35/276 (12%)
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAE 219
E V+ + + W LH L +++ F PT IQ IP A +G+DIIG AE
Sbjct: 122 EPFVTAFDTKGQLPEWAPFNLHAQLAAALHHKKFASPTSIQSQAIPKAV-EGRDIIGVAE 180
Query: 220 TGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVT 279
TGSGKTLA+GLPI+ LL + + KG +RAL++ PTRELALQV
Sbjct: 181 TGSGKTLAYGLPILHHLL----TTPRPPKSKGRRP--------VRALVLAPTRELALQVA 228
Query: 280 DHLKEV------------------AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPG 321
HLK AK V V IVGGMS +KQ R+L+ +++V TPG
Sbjct: 229 AHLKACLVDPIKKEEDTDDKPKGPAKPPAVSVAAIVGGMSAQKQRRVLERGVDVLVATPG 288
Query: 322 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT 381
RLW+++S + +++ L F VLDEADRMI+ GHF EL +I+ + + E +
Sbjct: 289 RLWDILSEDDALALQIKRLKFLVLDEADRMIQAGHFAELDNILKLTVRVDMPEEDAHDAL 348
Query: 382 QTCVTVSSLQRKKR--QTLVFSATIALSADFRKKLK 415
+ SS + K QT VFSAT LS D ++ LK
Sbjct: 349 EDFKKASSAEGKNEDVQTFVFSAT--LSKDLQRNLK 382
>gi|440296216|gb|ELP89056.1| ATP-dependent RNA helicase mak5, putative [Entamoeba invadens IP1]
Length = 606
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 151/262 (57%), Gaps = 50/262 (19%)
Query: 155 PDDAEEELVSEAEISTEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKD 213
P+ EEE +S+A++ E W +L ++ +++++Y LGF PT IQK IP A KD
Sbjct: 44 PNAMEEEPISDADLYIEMKEWRKLYKIDITILRALYDLGFIYPTEIQKFAIPKALTSQKD 103
Query: 214 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL---RALIITP 270
+IG+A TGSGKTL+F +P++QR +E KG + LI+ P
Sbjct: 104 LIGSAPTGSGKTLSFLIPLVQRFIE---------------------KGTFDTTQCLILVP 142
Query: 271 TRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 329
TRELA+Q+ DHL+++ K + V +VGG+++ KQ RLL P +V+GTPGR++EL +
Sbjct: 143 TRELAVQIRDHLQKLTKYLPRVTSCVVVGGLASVKQVRLLLQEPTIVIGTPGRIFELYNN 202
Query: 330 GEKHLVE-LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS 388
+ +++ L +L + V+DEADRM+E GHF EL+ + VTV
Sbjct: 203 QDTPVLKTLPSLPYLVVDEADRMVEPGHFSELKDL---------------------VTVV 241
Query: 389 SLQRKKRQTLVFSATIALSADF 410
S ++QT VFSAT+ L+A+
Sbjct: 242 S--NAEKQTFVFSATMQLAAEM 261
>gi|171682200|ref|XP_001906043.1| hypothetical protein [Podospora anserina S mat+]
gi|170941059|emb|CAP66709.1| unnamed protein product [Podospora anserina S mat+]
Length = 761
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 174/316 (55%), Gaps = 37/316 (11%)
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDI 214
PD EE V +E W L L P L+ +I L F +PTPIQ IP + G D+
Sbjct: 176 PDIEPEEDVDTSE-------WAPLELSPDLVAAIGNLRFGKPTPIQARAIPEIIN-GHDV 227
Query: 215 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 274
IG A TGSGKTLAFG+PI+++ L + + +G E EK P A+I++PTREL
Sbjct: 228 IGKASTGSGKTLAFGIPIVEKWLAK--------QAEGNEDEKKHPI----AMILSPTREL 275
Query: 275 ALQVTDHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 332
A Q++DHLK+++ G+ + + + GG++ +KQ R L+ + ++++GTPGRLWE++S
Sbjct: 276 AHQISDHLKKLSDGLTESPYICSVTGGLAIQKQLRQLE-KADIIIGTPGRLWEVISTEIA 334
Query: 333 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 392
+ + + F V+DEADR++++G F+E + II L T E + + +
Sbjct: 335 VMNSIRQIDFLVVDEADRLLKDGQFKEAEDIIKALDRTRPGEEAEEDSDS---DEEPTPK 391
Query: 393 KKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLN---SIETLSERAGMR-ANVAIVD 448
RQTLVFSAT F K L+ L K N + S+E L ++ R A +D
Sbjct: 392 HNRQTLVFSAT------FNKALQQ-KLAGKARYNLMGEAESLEHLLKKLNFREAKPKFID 444
Query: 449 LTNVSVLANKLEESFI 464
VS +A+KL+E I
Sbjct: 445 ANPVSQMADKLKEGLI 460
>gi|254574120|ref|XP_002494169.1| Essential nucleolar protein, putative DEAD-box RNA helicase
[Komagataella pastoris GS115]
gi|238033968|emb|CAY71990.1| Essential nucleolar protein, putative DEAD-box RNA helicase
[Komagataella pastoris GS115]
gi|328354012|emb|CCA40409.1| similar to ATP-dependent RNA helicase [Komagataella pastoris CBS
7435]
Length = 758
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 149/459 (32%), Positives = 210/459 (45%), Gaps = 72/459 (15%)
Query: 34 NSLKWNSSFSAADNDPFAFLVGSNELDG-GFLSLEEIDEASYNLQIPKPEKGKPGKKTNT 92
+SLKW D F L G E+DG G + I ++ + + + K T+
Sbjct: 44 SSLKWKPVEIPETLDDFQGLFGVEEIDGVGVV----IKNGEIKFEVKEDHENETVKDTDQ 99
Query: 93 KKRKRSSANEEDPGDGDGDEDGNGVQKE-----QEKNLKNQKGKKKKKKKKGKKIKTVEE 147
+ + DG D+ E EK ++ G K KK K K +K V++
Sbjct: 100 MSDDDEVFQDAESLDGREDDQNEPENFELDSVSTEKVPESTPGVKSNKKVKRKDVKEVKK 159
Query: 148 SVTVSNGPDDAEEELVSEAEISTEFDA-----------WNELRLHPLLMKSIYRLGFKEP 196
+ D E++ E + +F W E L P + +S+ LGF EP
Sbjct: 160 DEDQEDLEDAGSEQVPMEEDGHFKFSQMKMPEDVDLPLWPE-GLSPFVRQSLSILGFNEP 218
Query: 197 TPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEK 256
TPIQ IP A GKDIIG A TGSGKTLA+G+P++++ L E K
Sbjct: 219 TPIQNEAIPLAI-SGKDIIGKAITGSGKTLAYGIPLIEKYLTR------------ESRSK 265
Query: 257 YAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR---VVPIVGGMSTEKQERLLKARP 313
AP ++ PTRELA QV HLKE+AK + V+ + GG+S ++Q+RLL P
Sbjct: 266 QAPPA---GIVFAPTRELAHQVVKHLKEIAKDSPLTEHGVISVTGGLSIQRQQRLLDYGP 322
Query: 314 ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 373
++V TPGR EL+ + L ++ VLDEADR++++GHF EL+ I+ L
Sbjct: 323 GIIVATPGRFLELLESSNELATRLASVEVLVLDEADRLLQDGHFDELEKILSSLKKMRPH 382
Query: 374 NEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVN---GL-- 428
N +QR QTLVFSAT F K+L G L K N GL
Sbjct: 383 N---------------IQR--WQTLVFSAT------FSKEL-FGKLGSKYRWNEDQGLAE 418
Query: 429 --NSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
IE L +R R +VD V+ N++ E+ IE
Sbjct: 419 DEQIIELLGKRLRFRQKPTLVDTNPTEVVTNQVREALIE 457
>gi|451996154|gb|EMD88621.1| hypothetical protein COCHEDRAFT_1181781 [Cochliobolus
heterostrophus C5]
Length = 742
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 164/297 (55%), Gaps = 30/297 (10%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AW +L L ++ ++ +L F EPT IQ + IP G+D+IG A TGSGKTLAFG+PI+
Sbjct: 172 AWAKLDLSEEMLGALAKLKFSEPTDIQASTIPEII-AGRDVIGKASTGSGKTLAFGIPII 230
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL-KEVAKG--IN 290
+ L R A K ++K P ALII PTRELA Q+ +HL K AKG +
Sbjct: 231 ESYLTRR-AASKDTKDK-------VP----LALIIAPTRELAHQINEHLVKLCAKGEFDS 278
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+ I GG+S +KQ R L+ + ++VVGTPGRLWE++S G+ L + + F V+DEADR
Sbjct: 279 PYIASITGGLSVQKQRRQLE-KADIVVGTPGRLWEVISSGQGLLAKFKQIKFLVVDEADR 337
Query: 351 MIENGHFRELQSIIDML-PMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
++ GHF+E+ I+ +L P + E+T RQTLVFSAT D
Sbjct: 338 LLSQGHFKEMDDILKVLEPDDEVDENAEPEETPEA---------NRQTLVFSAT--FGKD 386
Query: 410 FRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
++KL + +N S+E L ++ R +D S +A+KL+E IE
Sbjct: 387 LQRKLAGKAKFGGDQMNQQQSMEYLLKKLRFREEKPKFIDTNPTSQMASKLQEGLIE 443
>gi|255932267|ref|XP_002557690.1| Pc12g08600 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582309|emb|CAP80487.1| Pc12g08600 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 719
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 23/298 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AW+ L L P ++ ++ F P+ IQKA IPA G D++G A TGSGKTLAFG+PI+
Sbjct: 141 AWDGLNLSPETFTALSKMKFSSPSAIQKASIPAIL-DGHDVVGKASTGSGKTLAFGIPII 199
Query: 234 QRLLEEREKAGKMLEEKGEEAEKY-APKGHLRALIITPTRELALQVTDHLKEV---AKGI 289
+ L++R K E + +++EK +P ALI++PTRELA Q+ H+ E+ +
Sbjct: 200 EHYLDQRGKQ----EGQSDKSEKNKSPI----ALILSPTRELAHQLGKHIGELIANSPDT 251
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
N RV I GGMS +KQ+R L A ++V+GTPGR+WE++S G + ++ + F V+DEAD
Sbjct: 252 NARVALITGGMSIQKQQRQL-ATADIVIGTPGRVWEILSTGTGLIRKMQKIQFLVVDEAD 310
Query: 350 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
R++ GHF+E++ I++ L + ++ + S+ RQTLVFSAT D
Sbjct: 311 RLLSEGHFKEMEHILNALDKHQAGDIADMDEEEEEEEPSN-----RQTLVFSAT--FHKD 363
Query: 410 FRKKLKHGS-LKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
++KL S + ++ S+E L ++ R +D+ S +A L+E +E
Sbjct: 364 LQQKLAGKSRWTSGEMLDNKESMEYLLKKLNFREEKPKFIDVNPESQMAVGLKEGIVE 421
>gi|367029791|ref|XP_003664179.1| hypothetical protein MYCTH_2306707 [Myceliophthora thermophila ATCC
42464]
gi|347011449|gb|AEO58934.1| hypothetical protein MYCTH_2306707 [Myceliophthora thermophila ATCC
42464]
Length = 785
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 161/297 (54%), Gaps = 30/297 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L L P ++ +I RL F +PT IQ IP + G D+IG A TGSGKTLAFG+PI++
Sbjct: 203 WVPLGLSPQVLSAIARLKFAKPTAIQAKAIPHIMN-GHDLIGKAATGSGKTLAFGIPIVE 261
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--R 292
L R +A + +K P ALI++PTRELA Q+ DHLKE+ G+
Sbjct: 262 SWLARRAEA--------QTTDKKQPI----ALILSPTRELAHQIRDHLKELCAGLTTGPY 309
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
V + GG++ +KQ+R + + +++VGTPGR+WEL S L L +SF V+DEADR++
Sbjct: 310 VCSVTGGLAVQKQQRQFE-KADILVGTPGRMWELASSSNSVLGALRGISFLVVDEADRLL 368
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 412
++GHF+E + I++ L E ++ + R RQTLVFSAT F K
Sbjct: 369 KDGHFKEAEEIMNALDRKAPGEEVVEDEGDSD---DETPRHNRQTLVFSAT------FNK 419
Query: 413 KLKHGSLKLKQSVNGLN---SIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
L+ L K N + S+E L ++ R VD VS +A L E I+
Sbjct: 420 NLQQ-KLAGKARYNLMGDAESLEYLLKKLNFREPRPKFVDTNPVSQMAENLREGLIQ 475
>gi|320581609|gb|EFW95829.1| Essential nucleolar protein, putative DEAD-box RNA helicase
[Ogataea parapolymorpha DL-1]
Length = 705
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 157/293 (53%), Gaps = 43/293 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+ L L ++ + +LGF++PT IQKA IP A GKD+IG A TGSGKTLA+G+PI++
Sbjct: 160 WSSLNLSASTLQGLQKLGFQKPTEIQKATIPLAV-DGKDVIGKAITGSGKTLAYGIPILE 218
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR-- 292
+ L +++ HL +I TPTRELA QV HL+E+ K
Sbjct: 219 KALSNKQE-------------------HLNGIIFTPTRELANQVMKHLQELFKYTPFHDK 259
Query: 293 -VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
V+ + GG+S +KQERLL +P +VV TPGR E++ ++ V+L + V DEADR+
Sbjct: 260 AVISLTGGLSIQKQERLLGYKPRVVVATPGRFLEILEKKTENAVQLASADILVCDEADRL 319
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 411
+++GHF EL I+++L +G K Q+LVFSAT S D
Sbjct: 320 LQDGHFDELGKILEILHNHRPKVQGH----------------KFQSLVFSAT--FSQDLF 361
Query: 412 KKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
KL+ + S + ++ LS+ R+ VD+ ++A+ + E+ I
Sbjct: 362 GKLEKAKKHVFDSEQAI--VKMLSKHLKFRSKPEYVDVNPTEIVAHSITEAMI 412
>gi|170100044|ref|XP_001881240.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643919|gb|EDR08170.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 616
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 148/271 (54%), Gaps = 47/271 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W++ LHP L ++++ F PTPIQ+A +P A G+D+IG A+TGSGKTLA+GLPI+
Sbjct: 31 WHKYSLHPQLSRALHAKSFLSPTPIQEAALPMAL-AGRDVIGVAQTGSGKTLAYGLPILH 89
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----- 289
+L + + + K K LRAL++ PTRELALQV+ HL + +
Sbjct: 90 HILSQPKPSPKT-------------KRPLRALVLAPTRELALQVSSHLNALLNHLEDFSS 136
Query: 290 ------------------------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWE 325
+V V IVGGMS++KQ R+L ++++ TPGRLW+
Sbjct: 137 EKTVKNSSKPATTDGKTPAKKPPPHVSVAAIVGGMSSQKQRRILDRGVDVLIATPGRLWD 196
Query: 326 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS--NEGQSEQTQT 383
LM + E+ + F VLDEADRMIE GHF EL++I+ + + ++G+ +
Sbjct: 197 LMEDDDTLAREIKNIRFLVLDEADRMIEAGHFAELENILRLTLRESACFNDDGEPIHVEE 256
Query: 384 CVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
+ +++ QT VFSAT LS D ++ L
Sbjct: 257 EDSKEGIKKDDLQTFVFSAT--LSKDLQRNL 285
>gi|342886208|gb|EGU86105.1| hypothetical protein FOXB_03374 [Fusarium oxysporum Fo5176]
Length = 774
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 188/365 (51%), Gaps = 47/365 (12%)
Query: 111 DEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEIST 170
D +G +KE E+ K K +K + G + ++ D A++E V A
Sbjct: 153 DGKNSGTKKEDEQLDKASKVVQKSSARGGNTFGAL------ADANDYADQEDVDMA---- 202
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
AW L L P ++ +I +L F +PT IQ+ IP G D+IG A+TGSGKTLAFG+
Sbjct: 203 ---AWVPLNLSPQILSAIAKLKFTKPTLIQEKTIPEILA-GDDVIGKAQTGSGKTLAFGI 258
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI- 289
P+++R LE L+E+G E+ P A++++PTRELA Q+ DHLK + G+
Sbjct: 259 PMVERWLE--------LQEQG--VERTGP----MAVVLSPTRELAKQLGDHLKALCDGLP 304
Query: 290 -NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 348
V + GG+S +KQ+R L+ + ++V+GTPGRLWE++SG + + F V+DEA
Sbjct: 305 SAPYVCVVTGGLSIQKQQRQLE-KADIVIGTPGRLWEVLSGDRALQSKFAKIKFLVVDEA 363
Query: 349 DRMIENGHFRELQSIIDMLPMTNGSNEG--------QSEQTQTCVTVSSLQRKKRQTLVF 400
DR+ + G F+E + II L +G + G ++ + R RQTLVF
Sbjct: 364 DRLFKVGQFKEAEDIIGAL---DGKSPGDDAESSDEDEDEDEDDDDEEDDDRNARQTLVF 420
Query: 401 SATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLE 460
SAT D + KL K K + N + L + R +D+ VS +A L+
Sbjct: 421 SAT--FDKDLQTKLAG---KGKSTGNDEEKMAYLMKCLKFRGEPKFIDVNPVSQMAQGLK 475
Query: 461 ESFIE 465
E IE
Sbjct: 476 EGLIE 480
>gi|406602865|emb|CCH45589.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 775
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 161/304 (52%), Gaps = 48/304 (15%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW+ L L ++ + L F +PTPIQK CIP + +G DIIG A TGSGKTLA+G+
Sbjct: 202 DLPAWSNLDLSTYTLQGLSHLNFTKPTPIQKKCIPICS-EGNDIIGKASTGSGKTLAYGI 260
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI- 289
PI++RL+ ++ P G +I TPTRELA QV DHL +++K
Sbjct: 261 PILERLVSLKDPK--------------FPAG----VIFTPTRELAHQVVDHLNKISKFFP 302
Query: 290 --NVRVVPIVGGMSTEKQERLLKARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
++ + GG+S +KQER+LK +++V TPGR EL+ + ++ L VL
Sbjct: 303 SHQSSILSLTGGLSIQKQERILKYENSGQIIVATPGRFLELIERNGEFAKKVSNLEILVL 362
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
DEADR++++GHF E + I+ +L + + ++ K Q+LVFSAT A
Sbjct: 363 DEADRLLQDGHFDEFEQILKIL------------------STNRTKQDKWQSLVFSATFA 404
Query: 406 LSADFRKKLKHGSLKLKQSVNGLNS----IETLSERAGMRANVAIVDLTNVSVLANKLEE 461
+ + KL H K K + L+ I+ L+E+ +DL LAN++ E
Sbjct: 405 V--ELFSKLVHQGYKPKDEPSKLDEREQIIKILNEKIKFSKKPEFIDLNPNQKLANEITE 462
Query: 462 SFIE 465
+ +E
Sbjct: 463 TMVE 466
>gi|396475407|ref|XP_003839779.1| similar to ATP-dependent RNA helicase MAK5 [Leptosphaeria maculans
JN3]
gi|312216349|emb|CBX96300.1| similar to ATP-dependent RNA helicase MAK5 [Leptosphaeria maculans
JN3]
Length = 826
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 170/300 (56%), Gaps = 28/300 (9%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
+ AW EL L ++ ++ +L F++PT IQ + IP G+D+IG A TGSGKTLAFG
Sbjct: 246 VDVSAWEELNLSEQVLDALAKLNFQKPTEIQASTIPEIM-AGRDVIGKASTGSGKTLAFG 304
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA-KG 288
+PI++ L + ++++ + P ALI+ PTRELA Q+T HL + KG
Sbjct: 305 IPIIESFLSAQPGL--------KDSKDHTPI----ALIVAPTRELAHQITAHLIALCTKG 352
Query: 289 -INV-RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
N + I GG+S +KQ R L+ + ++VVGTPGRLWE++S G+ L + + F V+D
Sbjct: 353 DFNAPHIASITGGLSVQKQRRQLE-KADIVVGTPGRLWEVISTGQGLLEKFKQIRFLVID 411
Query: 347 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 406
EADR++ +GH++EL I+ +L + + +G+++ + RQTLVFSAT
Sbjct: 412 EADRLLSDGHYQELGDILKILEPDSEAVDGENDDATPELN--------RQTLVFSATFGK 463
Query: 407 SADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
S ++KL S K ++ S+E L ++ R +D S +ANKL+E IE
Sbjct: 464 S--LQQKLAGKSRPDKAEMSQQASMEYLLKKLKFREEKPKFIDANPNSQMANKLKEGLIE 521
>gi|308498215|ref|XP_003111294.1| hypothetical protein CRE_03826 [Caenorhabditis remanei]
gi|308240842|gb|EFO84794.1| hypothetical protein CRE_03826 [Caenorhabditis remanei]
Length = 761
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 186/366 (50%), Gaps = 65/366 (17%)
Query: 118 QKEQEKNLKNQK------GKKKKKKKKGKKIKTVEESVTVSN------GPDDAEEELVSE 165
QK +E+ N+K K+K+K+ + K ++ +EE V S G E +
Sbjct: 87 QKRKEQMAANRKQKKERLAKRKQKESEAKLVEPIEEKVKKSGETKKRKGEKSEESGKSKK 146
Query: 166 AEISTEFDAWNELRLHP-LLMKSIYRLGF----------------KEPTPIQKACIPAAA 208
++ T+ AW + P +++++ ++GF EPTPIQ A +P A
Sbjct: 147 SKKETDISAWKQFFFLPNEILQAVEQMGFVSCAELTKLSKFLFSFSEPTPIQSAVLPVAV 206
Query: 209 HQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALII 268
+D++GAAETGSGKTLAFG+PI+ RLLE E EE E P RAL+I
Sbjct: 207 RDHQDVLGAAETGSGKTLAFGIPIVARLLESS-------AENDEEEEFKGP----RALVI 255
Query: 269 TPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLL-KARPELVVGTPGRLWELM 327
PTREL +Q+ H+ + +++ IVGG++ KQ+R++ + RP++VV TPGRLW +M
Sbjct: 256 APTRELVIQIMRHITALIAPTSLKATSIVGGLAQVKQDRVISQQRPDIVVATPGRLWAMM 315
Query: 328 SGGEK--HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 385
E+ +L E L V+DE DRM+E G+F EL I+ N E
Sbjct: 316 QEAEEGDYLAEWKNLKCLVVDETDRMVEEGYFAELTHIL---------NRVHEES----- 361
Query: 386 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANV- 444
++K QTLVFSAT+ + + + K + ++ I+ L + G+R N
Sbjct: 362 -----DKEKLQTLVFSATLTFAK--AQDVAEEEKKKAKELSSQQKIQRLIKLTGLRENKH 414
Query: 445 AIVDLT 450
++DLT
Sbjct: 415 KVIDLT 420
>gi|408393250|gb|EKJ72515.1| hypothetical protein FPSE_07152 [Fusarium pseudograminearum CS3096]
Length = 781
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 182/351 (51%), Gaps = 41/351 (11%)
Query: 119 KEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNEL 178
K+ E+ +K +G +K + G + ++G D ++E V A AW L
Sbjct: 174 KQDEQLVKAAQGVQKSSTRGGNTFGAL------ADGNDYKDQEDVDMA-------AWVSL 220
Query: 179 RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLE 238
L P ++ +I +L F +PT IQK IP G D+IG A+TGSGKTLAFG+P+++R LE
Sbjct: 221 NLSPQIISAIAKLKFMKPTKIQKRTIPEIV-AGHDVIGKAQTGSGKTLAFGIPMVERWLE 279
Query: 239 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI--NVRVVPI 296
+E+ K + P +L+++PTRELA Q+ DHLK + G+ V +
Sbjct: 280 MQEQGVK----------RTGPM----SLVLSPTRELAKQLGDHLKALCDGLPSAPYVCVV 325
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
GG+S KQ+R L+ + ++V+GTPGRLWE++SG + + F V+DEADR+ + G
Sbjct: 326 TGGLSILKQQRQLE-KADIVIGTPGRLWEVLSGDRALQSKFAKIRFLVVDEADRLFKVGQ 384
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK--KRQTLVFSATIALSADFRKKL 414
F+E + II L +G + G +++ + RQTLVFSAT D + KL
Sbjct: 385 FKEAEDIIGAL---DGKSPGDDAESEEESEDEDEDDEGAARQTLVFSAT--FDKDLQTKL 439
Query: 415 KHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
K K S N + L + R +D+ VS +A L E IE
Sbjct: 440 AG---KGKSSGNDDEKMAYLMKCLKFRGEPKFIDVNPVSQMAEGLREGLIE 487
>gi|410516913|sp|Q4IBS2.2|MAK5_GIBZE RecName: Full=ATP-dependent RNA helicase MAK5
Length = 781
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 182/351 (51%), Gaps = 41/351 (11%)
Query: 119 KEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNEL 178
K+ E+ +K +G +K + G + ++G D ++E V A AW L
Sbjct: 174 KQDEQLVKAAQGVQKSSTRGGNTFGAL------ADGNDYKDQEDVDMA-------AWVSL 220
Query: 179 RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLE 238
L P ++ +I +L F +PT IQK IP G D+IG A+TGSGKTLAFG+P+++R LE
Sbjct: 221 NLSPQIISAIAKLKFMKPTKIQKRTIPEIV-AGHDVIGKAQTGSGKTLAFGIPMVERWLE 279
Query: 239 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI--NVRVVPI 296
+E+ K + P +L+++PTRELA Q+ DHLK + G+ V +
Sbjct: 280 MQEQGVK----------RTGPM----SLVLSPTRELAKQLGDHLKALCDGLPSAPYVCVV 325
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
GG+S KQ+R L+ + ++V+GTPGRLWE++SG + + F V+DEADR+ + G
Sbjct: 326 TGGLSILKQQRQLE-KADIVIGTPGRLWEVLSGDRALQSKFAKIRFLVVDEADRLFKVGQ 384
Query: 357 FRELQSIIDMLPMTNGSNEG--QSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
F+E + II L +G + G + ++ + RQTLVFSAT D + KL
Sbjct: 385 FKEAEDIIGAL---DGKSPGDDAESEEESDEEDEDDEDAARQTLVFSAT--FDKDLQTKL 439
Query: 415 KHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
K K S N + L + R +D+ VS +A L E IE
Sbjct: 440 AG---KGKSSGNDDEKMAYLMKCLKFRGEPKFIDVNPVSQMAEGLREGLIE 487
>gi|302890093|ref|XP_003043931.1| hypothetical protein NECHADRAFT_99434 [Nectria haematococca mpVI
77-13-4]
gi|256724850|gb|EEU38218.1| hypothetical protein NECHADRAFT_99434 [Nectria haematococca mpVI
77-13-4]
Length = 760
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 163/294 (55%), Gaps = 24/294 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AW L L P ++ +I +LGF +PT IQ+ IP G+D+IG A+TGSGKTLAFG+P++
Sbjct: 195 AWVPLNLSPQILSAIAKLGFTKPTLIQEKTIPEIV-SGEDVIGKAQTGSGKTLAFGIPMV 253
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN--V 291
++ LE L E+G E+ P +++++PTRELA Q+ DHLK + G++
Sbjct: 254 EKWLE--------LYEQG--VERTGP----MSVVLSPTRELAKQLGDHLKALCDGLSNAP 299
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
V + GG+S +KQ+R L+ + ++V+GTPGRLWE++SG + F V+DEADR+
Sbjct: 300 YVCVVTGGLSIQKQQRQLE-KADIVIGTPGRLWEVLSGDATLQNTFSKIRFLVVDEADRL 358
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 411
+ G F+E + II L ++ + +R RQTLVFSAT D +
Sbjct: 359 FKVGQFKEAEDIIGALDGKR-PSDDADSSDEEDDEEEDDERSARQTLVFSAT--FDKDLQ 415
Query: 412 KKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
KL K K + N + L + R +D+ VS +A+ L+E IE
Sbjct: 416 TKLAG---KGKSTGNDEEKMAYLMKCLKFRGEPKFIDVNPVSQMADGLKEGLIE 466
>gi|68482156|ref|XP_714962.1| hypothetical protein CaO19.11024 [Candida albicans SC5314]
gi|68482283|ref|XP_714899.1| hypothetical protein CaO19.3540 [Candida albicans SC5314]
gi|74656286|sp|Q59ZH9.1|MAK5_CANAL RecName: Full=ATP-dependent RNA helicase MAK5
gi|46436498|gb|EAK95859.1| hypothetical protein CaO19.3540 [Candida albicans SC5314]
gi|46436563|gb|EAK95923.1| hypothetical protein CaO19.11024 [Candida albicans SC5314]
Length = 782
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 177/317 (55%), Gaps = 38/317 (11%)
Query: 155 PDDAEEELVS--EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
PDD E L + E ++ + A+ + + +L FK+PTPIQK IP A GK
Sbjct: 185 PDDNEINLPNWQEGDLGSSISAYT--------LYGLSQLDFKKPTPIQKETIPIAL-SGK 235
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 272
D+IG A TGSGKTLA+G+PI+++ ++ + ++++ ++ + P G +I PTR
Sbjct: 236 DVIGKATTGSGKTLAYGIPILEKYIQ----SLNLIKQNNKDKKINHPTG----IIFAPTR 287
Query: 273 ELALQVTDHLKEVAKG--INVR-VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 329
ELA QV DHL ++AK ++ R +V I GG+S +KQ+RLL+ P ++V TPGR+ EL+ G
Sbjct: 288 ELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPGRMLELVQG 347
Query: 330 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS 389
+ L ++ VLDEADR++++GHF E + I+++ G N +S+ +
Sbjct: 348 DSELAKRLASIDIIVLDEADRLLQDGHFDEFEKILELF----GKNRPKSKSIEW------ 397
Query: 390 LQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVD 448
K QTLVFSAT + FRK +H K + ++ L+E+ + +VD
Sbjct: 398 ----KWQTLVFSATFSRDL-FRKLDRHQKGKSSSLMGNDEIVQLLNEKLKFKDKKPTLVD 452
Query: 449 LTNVSVLANKLEESFIE 465
+++ ++ E+ +E
Sbjct: 453 ANPKEIVSGQITEALVE 469
>gi|46121917|ref|XP_385512.1| hypothetical protein FG05336.1 [Gibberella zeae PH-1]
Length = 783
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 182/351 (51%), Gaps = 41/351 (11%)
Query: 119 KEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNEL 178
K+ E+ +K +G +K + G + ++G D ++E V A AW L
Sbjct: 174 KQDEQLVKAAQGVQKSSTRGGNTFGAL------ADGNDYKDQEDVDMA-------AWVSL 220
Query: 179 RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLE 238
L P ++ +I +L F +PT IQK IP G D+IG A+TGSGKTLAFG+P+++R LE
Sbjct: 221 NLSPQIISAIAKLKFMKPTKIQKRTIPEIV-AGHDVIGKAQTGSGKTLAFGIPMVERWLE 279
Query: 239 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--RVVPI 296
+E+ K + P +L+++PTRELA Q+ DHLK + G+ V +
Sbjct: 280 MQEQGVK----------RTGP----MSLVLSPTRELAKQLGDHLKALCDGLPSAPYVCVV 325
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
GG+S KQ+R L+ + ++V+GTPGRLWE++SG + + F V+DEADR+ + G
Sbjct: 326 TGGLSILKQQRQLE-KADIVIGTPGRLWEVLSGDRALQSKFAKIRFLVVDEADRLFKVGQ 384
Query: 357 FRELQSIIDMLPMTNGSNEG--QSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
F+E + II L +G + G + ++ + RQTLVFSAT D + KL
Sbjct: 385 FKEAEDIIGAL---DGKSPGDDAESEEESDEEDEDDEDAARQTLVFSAT--FDKDLQTKL 439
Query: 415 KHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
K K S N + L + R +D+ VS +A L E IE
Sbjct: 440 AG---KGKSSGNDDEKMAYLMKCLKFRGEPKFIDVNPVSQMAEGLREGLIE 487
>gi|398403739|ref|XP_003853336.1| hypothetical protein MYCGRDRAFT_41129 [Zymoseptoria tritici IPO323]
gi|339473218|gb|EGP88312.1| hypothetical protein MYCGRDRAFT_41129 [Zymoseptoria tritici IPO323]
Length = 793
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 173/313 (55%), Gaps = 37/313 (11%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
AE+ S A++S AW L+L P M ++ L F +PT IQK IP G D+IG
Sbjct: 200 AEDANDSAADVS----AWRPLKLCPDTMAALAALKFSKPTAIQKFVIPEVL-AGHDVIGK 254
Query: 218 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQ 277
A TGSGKTLAFG+PI++R LE A G+ A K AP ALI++PTRELA+Q
Sbjct: 255 ASTGSGKTLAFGIPILERFLESAVGA------DGKRA-KRAP----LALILSPTRELAVQ 303
Query: 278 VTDHLKEV-AKGINVR--VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 334
+ HL + + G++ R + + GGMS +KQ+R LK ++VV TPGRLWE++ G
Sbjct: 304 LDQHLTSLCSSGLSRRPWIATLTGGMSIQKQQRQLK-DADIVVATPGRLWEIIESGRGTA 362
Query: 335 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 394
L + F V+DEADR++ G F+E++ I++ L + + EG E +T
Sbjct: 363 AMLKQIEFLVIDEADRLLSEGQFKEVEEILNSLDRVDDA-EGAEEGDET----------- 410
Query: 395 RQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLN-SIETLSERAGMR-ANVAIVDLTNV 452
RQTLVFSAT + +KKL G + + ++ G S+E L + R +D V
Sbjct: 411 RQTLVFSATFDRA--LQKKLV-GKVNRQSALMGSKESMEYLLGKLNFREEEPKFIDANPV 467
Query: 453 SVLANKLEESFIE 465
+ LA+ L E IE
Sbjct: 468 NQLASGLREGLIE 480
>gi|402225555|gb|EJU05616.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 752
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 211/415 (50%), Gaps = 77/415 (18%)
Query: 106 GDGDGDEDGNGVQKEQEKNLK----NQKGKKK--KKKKKGKKIKTVEESVTVSNGPDDAE 159
G G+ E+G + E+ N++ Q G +K K + KGK++ ESV A+
Sbjct: 76 GSGEFTEEGGMLMLEEVDNVEVTYEEQAGGRKVAKFRVKGKQLNKKGESVISGISHKTAQ 135
Query: 160 EELVSEAE-------ISTEFDAW--NELRLHPL---LMKSIYRLGFKEPTPIQKACIPAA 207
+ + FD + E +L PL + +S++ LGF +PT IQ IP A
Sbjct: 136 PSKPRSVQPAAPILGVEQSFDEYLIPEWQLFPLKNQIKRSLHGLGFTKPTEIQSRSIPIA 195
Query: 208 AHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALI 267
QG+DIIG AETGSGKTLA+GLPI+ +LL + AG + E+ L ALI
Sbjct: 196 L-QGRDIIGVAETGSGKTLAYGLPIINQLLVK--YAGVIPPEQRT----------LSALI 242
Query: 268 ITPTRELALQVTDHLKEVAKGIN--------------------VRVVPIVGGMSTEKQER 307
+ PTRELALQV +HL+ V + +N + + IVGGMS KQ R
Sbjct: 243 LAPTRELALQVGEHLRAVVEQVNPSISKEGVKEDKKGPRGPPLISIGGIVGGMSNLKQRR 302
Query: 308 LLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 367
+++ ++++ TPGRLW+L+ + ++ + F VLDEADRMIE GHF EL +I L
Sbjct: 303 IIERGMDIMIATPGRLWDLLGEDDSLAQQVRAIRFLVLDEADRMIETGHFEELHNI---L 359
Query: 368 PMTNGSNEGQSEQTQTCVTVSSLQR-------------KKRQTLVFSATIALSADFR--- 411
+T +EG + + + + QR + QT VFSAT LS D +
Sbjct: 360 RLTRRDSEGDAIDDASNI---AFQRAGIEVTAGGGSTSENMQTFVFSAT--LSRDLQMNL 414
Query: 412 KKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
KK K G + K+ N ++++ L ER R I+DLT +++ L+E+ +E
Sbjct: 415 KKRKRGPPR-KKGENPPSTLDELLERLDFRDEQPEIIDLTPEQGVSHTLQEAKLE 468
>gi|429855665|gb|ELA30611.1| ATP-dependent RNA helicase mak5 [Colletotrichum gloeosporioides
Nara gc5]
Length = 749
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 165/296 (55%), Gaps = 34/296 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W +L L P ++ +I +L F +P+ IQK+ IP G D+IG A TGSGKTLAF +PI++
Sbjct: 192 WIDLGLSPAIVSAIAKLKFTKPSNIQKSSIPEIL-AGHDVIGKASTGSGKTLAFSIPIVE 250
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR-- 292
+E K + GE+ ++AP ALI++PTRELA Q+T+H+K + G+
Sbjct: 251 DWIE------KFDAKDGEKDTEHAPT----ALILSPTRELAHQITNHIKNLCAGLTNAPF 300
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
V + GG+S KQ+R L A+ ++V+GTPGRLWE++S + L + + V+DEADR++
Sbjct: 301 VCSVTGGLSVFKQQRQL-AKADIVIGTPGRLWEVISSSTELLSGFKKIRYLVVDEADRLL 359
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSADF 410
GHF+E I+D L +E + +Q T RQTLVFSAT L
Sbjct: 360 SEGHFKEAGEILDALD-REALDEDEDKQNLT----------PRQTLVFSATFHKGLQQKL 408
Query: 411 RKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
K K G + ++ S+E L +R R ++D+ V+ +A L+E IE
Sbjct: 409 AGKGKWGLMSEEE------SMEYLLKRLNFREEKPKLIDVNPVAQMAAGLKEGLIE 458
>gi|238882283|gb|EEQ45921.1| hypothetical protein CAWG_04261 [Candida albicans WO-1]
Length = 768
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 176/317 (55%), Gaps = 38/317 (11%)
Query: 155 PDDAEEELVS--EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
PDD E L + E ++ + A+ + + +L FK+PTPIQK IP A GK
Sbjct: 171 PDDNEINLPNWQEGDLGSSISAYT--------LYGLSQLDFKKPTPIQKETIPIAL-SGK 221
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 272
D+IG A TGSGKTLA+G+PI+++ ++ + ++++ ++ + P G +I PTR
Sbjct: 222 DVIGKATTGSGKTLAYGIPILEKYIQ----SLNLIKQNNKDKKINHPTG----IIFAPTR 273
Query: 273 ELALQVTDHLKEVAKG--INVR-VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 329
ELA QV DHL ++AK ++ R +V I GG+S +KQ+RLL+ P ++V TPGR+ EL+ G
Sbjct: 274 ELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPGRMLELVQG 333
Query: 330 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS 389
+ L + VLDEADR++++GHF E + I+++ G N +S+ +
Sbjct: 334 DSELAKRLASTDIIVLDEADRLLQDGHFDEFEKILELF----GKNRPKSKSIEW------ 383
Query: 390 LQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVD 448
K QTLVFSAT + FRK +H K + ++ L+E+ + +VD
Sbjct: 384 ----KWQTLVFSATFSRDL-FRKLDRHQKGKSSSLMGNDEIVQLLNEKLKFKDKKPTLVD 438
Query: 449 LTNVSVLANKLEESFIE 465
+++ ++ E+ +E
Sbjct: 439 ANPKEIVSGQITEALVE 455
>gi|213406505|ref|XP_002174024.1| ATP-dependent RNA helicase mak5 [Schizosaccharomyces japonicus
yFS275]
gi|212002071|gb|EEB07731.1| ATP-dependent RNA helicase mak5 [Schizosaccharomyces japonicus
yFS275]
Length = 695
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 135/247 (54%), Gaps = 43/247 (17%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
+ + W+ + L ++ + +LGF PT IQ+ +P A G D+IG AETGSGKTLAF
Sbjct: 159 AVDVSKWSNIPLSAAILGRLSKLGFSAPTHIQELVLPVAM-AGSDVIGKAETGSGKTLAF 217
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 288
G+PI++ L K ++ALI+ PTRELA Q+ +HL++
Sbjct: 218 GIPILEHCLRNINKG-------------------IQALIMAPTRELAQQIYNHLEQCNPS 258
Query: 289 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 348
++ +V + GG++ +KQ+RLL +P +V+GTPGRLW ++S + E + VLDEA
Sbjct: 259 TDIHIVTVTGGLAIQKQQRLLAKKPSIVIGTPGRLWSVIS-SQGFDEEFKNVKMLVLDEA 317
Query: 349 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--AL 406
DR+++ HF EL +IID+L G +QT RQT +FSAT L
Sbjct: 318 DRLLQKNHFEELHNIIDLL--------GNPKQTN------------RQTFIFSATFDAHL 357
Query: 407 SADFRKK 413
+ RKK
Sbjct: 358 QENLRKK 364
>gi|367040293|ref|XP_003650527.1| hypothetical protein THITE_2110069 [Thielavia terrestris NRRL 8126]
gi|346997788|gb|AEO64191.1| hypothetical protein THITE_2110069 [Thielavia terrestris NRRL 8126]
Length = 775
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 163/297 (54%), Gaps = 31/297 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L L ++ +I RL F +PT IQ + IP + G D+IG A TGSGKTLAFG+PI++
Sbjct: 196 WVPLGLSQQMLSAIARLKFAKPTAIQASAIPEVMN-GHDVIGKAVTGSGKTLAFGIPIVE 254
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI--NVR 292
L KA ++ AEK P ALI++PTRELA Q+ DHLK++ G+ +
Sbjct: 255 SWLA---KATNGIQT----AEKKQPI----ALILSPTRELAHQIADHLKQLCAGLVTSPY 303
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+ + GG++ +KQ+R L+ + ++V+GTPGR+WE+MS L L + F V+DEADR++
Sbjct: 304 ICSVTGGLAVQKQQRQLE-KADIVIGTPGRMWEVMSTSNSVLTALRGVGFLVVDEADRLL 362
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 412
++GHF+E + I+ L T + + R RQTLVFSAT F K
Sbjct: 363 KDGHFKEAEEILKALDRT-----APGDDEEGSDDEDEAPRHSRQTLVFSAT------FNK 411
Query: 413 KLKHGSLKLKQSVNGLN---SIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
L+ L K N + S+E L ++ R +D VS +A L+E I+
Sbjct: 412 ALQQ-KLAGKARYNLMGEAESLEYLLKKLNFREPRPKFLDTNPVSQMAENLKEGLIQ 467
>gi|407919561|gb|EKG12791.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 735
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 162/299 (54%), Gaps = 24/299 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AWN L L M +I +L F PT IQ+A IP G D++G A TGSGKTLAFG+PI+
Sbjct: 198 AWNSLNLSNETMVAISKLKFGAPTRIQRAAIPEIL-SGHDVVGKAATGSGKTLAFGIPIL 256
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR- 292
+ LE + K +KGE+A ALI++PTRELA Q++ HL ++
Sbjct: 257 ESFLES--QGNKKAPKKGEKAPT--------ALILSPTRELAHQISKHLTDLYTSGTFES 306
Query: 293 --VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
V I GG+S +KQ+R L+ ++VVGTPGRLWE++S G L F V+DEADR
Sbjct: 307 PFVATITGGLSIQKQQRQLET-ADVVVGTPGRLWEVISLGHGVLKRFKRTKFLVVDEADR 365
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSA 408
++ GHF+E++ I+++L + + + E+ +RQTLVFSAT L
Sbjct: 366 LLSEGHFKEVEEILNVLGSEDEDEDAEDEEENEEREDVQDSPVQRQTLVFSATFNKGLQQ 425
Query: 409 DFRKKLK-HGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
K K HG L ++ S+E L ++ R VD+ VS +A L+E +E
Sbjct: 426 KLTGKAKWHGDL-----LSNKESMEYLLKKLNFREERPKFVDVNPVSQMAEGLKEGLVE 479
>gi|340507841|gb|EGR33722.1| hypothetical protein IMG5_042580 [Ichthyophthirius multifiliis]
Length = 729
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 123/191 (64%), Gaps = 15/191 (7%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEE 239
+HPL+ +S+ F PT IQ + H D + A++TGSGKTL+FG+PIM +L +
Sbjct: 16 IHPLINQSLLECNFDTPTDIQAYVLSCYKHYN-DFLVASQTGSGKTLSFGIPIMSEILFD 74
Query: 240 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN--VRVVPIV 297
+E +E +K P+ +++ LI+ PTREL LQ+ +HL ++ K +RV IV
Sbjct: 75 KE----------DEKDK-KPQNYIKCLILAPTRELVLQIENHLNQINKHSKNLIRVGSIV 123
Query: 298 GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFFVLDEADRMIENGH 356
GG+S EKQ R+L P++++ TPGRLW+++ E ++ L+ + +FV+DEADRM+E GH
Sbjct: 124 GGISKEKQRRILSYIPDILIATPGRLWDMIENYEHDCLKRLNQIKYFVIDEADRMVELGH 183
Query: 357 FRELQSIIDML 367
F+EL +IID +
Sbjct: 184 FKELDNIIDQI 194
>gi|320592957|gb|EFX05366.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 855
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 166/308 (53%), Gaps = 24/308 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
AW L + P L+ + RL F +P+ IQ A IP G D+IG A TGSGKTLAF +PI+
Sbjct: 187 AWVPLDIVPPLLSCLARLKFSKPSAIQAATIPEIL-AGHDVIGKASTGSGKTLAFAIPIV 245
Query: 234 QRLLEE--REKAGKMLEEKGEEAE-----KYAPKGHLRALIITPTRELALQVTDHLKEVA 286
QR L E E+ K E G++ K P AL+++PT ELA Q+T H+KE+
Sbjct: 246 QRWLAEGGAERRQKKTEADGDKDADGDTPKKRPVCRPTALVLSPTGELAHQITTHIKELC 305
Query: 287 KGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
+ V + GG+S KQ+R L+ + ++VVGTPGRLWE++S + L ++ F V
Sbjct: 306 AALPSYPYVCAVTGGLSVFKQQRQLE-KADIVVGTPGRLWEVLSTSKPLLEAFRSIDFLV 364
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR-----KKRQTLV 399
+DEADR++ +GHF+E + I++ L T +EG+ + + + K RQTLV
Sbjct: 365 VDEADRLLSDGHFKEAEEILEALDRTE-VDEGEGKGEDEAEDENEAELETPPPKPRQTLV 423
Query: 400 FSATI--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLAN 457
FSAT L K ++ + KQS++ L E + +D+ VS +A
Sbjct: 424 FSATFNRGLQQKLAGKSRYDLMDQKQSMDHLMKRLNFREESPQ-----FIDVNPVSQMAE 478
Query: 458 KLEESFIE 465
+L E +E
Sbjct: 479 RLREGMVE 486
>gi|388579536|gb|EIM19858.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 711
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 165/294 (56%), Gaps = 33/294 (11%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 243
L++S++ PTPIQK + A+ + KD+IG AETGSGKTLA+GLPI+ R++E
Sbjct: 152 LLRSLHENSIVTPTPIQKESLKASMIR-KDVIGIAETGSGKTLAYGLPILSRIVE----- 205
Query: 244 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-----VRVVPIVG 298
GE P+ L AL++ PTRELALQV LK+ A + V V +VG
Sbjct: 206 -------GE-----IPEESLAALVLCPTRELALQVAGELKKFAPRVQDITRRVNVATVVG 253
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
GMS +KQ+R L+ +VV TPGRLWE++ F V+DEADRMIE GHF
Sbjct: 254 GMSIQKQKRQLQY-ANIVVATPGRLWEVLLDDGTLAKRAIRSQFLVIDEADRMIEAGHFE 312
Query: 359 ELQSIIDMLPMTNGSN----EGQSEQTQTCVTVSSLQRKKRQTLVFSATIA--LSADFRK 412
E+ I+ M T+ S+ + + E T+ + QT+VFSAT++ L + ++
Sbjct: 313 EMDKILRMTQRTSKSSTAAFQDEFESTEIGLPEEVPATDDMQTMVFSATLSKDLQQNLKR 372
Query: 413 KLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
K K GS K KQ V +S++ L R R +I+DL+ V+ + + LEE+ ++
Sbjct: 373 KRKAGSGKKKQEVK--SSLDDLLMRLDFRDLEPSIIDLSPVNKVVSTLEEARVD 424
>gi|149248082|ref|XP_001528428.1| hypothetical protein LELG_00948 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032565|sp|A5DUB2.1|MAK5_LODEL RecName: Full=ATP-dependent RNA helicase MAK5
gi|146448382|gb|EDK42770.1| hypothetical protein LELG_00948 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 855
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 211/453 (46%), Gaps = 82/453 (18%)
Query: 14 KETKPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEAS 73
K P +++ +K + K+N L W DN F GGF LEEID
Sbjct: 33 KRNTPTLKQKLKKESKIVKINELAW-KPVEIPDN--FGDF-------GGFYGLEEIDGVD 82
Query: 74 YNLQIPKPE---KGKPGKKTNTKKRKRSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQK- 129
+ KP+ KG+ G+K+ + + ++ NE + GD ++G + +++++N N +
Sbjct: 83 VEMVDGKPQFVVKGEEGEKSVSNEN--TTTNELEDGDDIEVDEGEEIAQQEQENSDNDEL 140
Query: 130 -------------------------------GKKKKKKKKGKKIKTVEESVT--VSNGPD 156
K++K KK E + N
Sbjct: 141 IEEDAEEVEEQQQHGEKELEEEEFTGFGDDIAKEEKDSDGAKKKLNSSEDIDELKYNAFA 200
Query: 157 DAEEELVSEAEISTEFDAWNELR----LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+ + L ++ EI + W E + L P ++ + + F PTPIQK IP A +GK
Sbjct: 201 NLDLPLPNDDEI--DLPEWGEDKIETCLSPYILNGLSNMKFTTPTPIQKRTIPLAL-EGK 257
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 272
D+IG A TGSGKTLA+G+PI+++ ++ + + + EK H +I PTR
Sbjct: 258 DVIGKATTGSGKTLAYGIPILEKYIQSLDTVKRKVREK--------VVNHPTGIIFAPTR 309
Query: 273 ELALQVTDHLKEVAKGINVR---VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 329
ELA QV DHL ++A+ + +V + GG+S +KQERLL P ++V TPGR+ EL
Sbjct: 310 ELAHQVVDHLNKIAQYSPLSTKGIVSVTGGLSIQKQERLLSFGPGIIVATPGRMLELCQN 369
Query: 330 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS 389
++ + L VLDEADR++++GHF E + I+++ N+ E
Sbjct: 370 DQELVKRLSMTDIIVLDEADRLLQDGHFEEFEKILELFNKNRPKNDKSIEW--------- 420
Query: 390 LQRKKRQTLVFSATIA--LSADFRKKLKHGSLK 420
K QTLVFSAT + L K+ K S+K
Sbjct: 421 ----KWQTLVFSATFSRDLFGKLDKQQKQKSVK 449
>gi|260949921|ref|XP_002619257.1| hypothetical protein CLUG_00416 [Clavispora lusitaniae ATCC 42720]
gi|238846829|gb|EEQ36293.1| hypothetical protein CLUG_00416 [Clavispora lusitaniae ATCC 42720]
Length = 801
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 138/240 (57%), Gaps = 28/240 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W + L + + LGFK+PTPIQK+ IP A +GKD+IG A TGSGKTLA+G+PI++
Sbjct: 215 WQNVPLSAYTLSGLQALGFKQPTPIQKSAIPLAL-EGKDVIGKATTGSGKTLAYGIPILE 273
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR-- 292
+ + + + + ++K A P G +I PTRELA QV+DHL ++AK +
Sbjct: 274 KYISKIAEIKTLRQKKTIPA----PTG----IIFAPTRELAHQVSDHLNKIAKYAPLASN 325
Query: 293 -VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+V + GG+S ++QERLL P ++V TPGR EL+ E+ + VLDEADR+
Sbjct: 326 GIVSVTGGLSIQRQERLLSYGPGIIVATPGRFLELIEKSEEFTKRMALTEIIVLDEADRL 385
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 411
+++GHF E + I+D+L G N ++ + QTLVFSAT + F+
Sbjct: 386 LQDGHFEEFERILDLL----GKNRDKAYGW------------RWQTLVFSATFSRDLFFK 429
>gi|146412600|ref|XP_001482271.1| hypothetical protein PGUG_05291 [Meyerozyma guilliermondii ATCC
6260]
gi|152032567|sp|A5DPU0.1|MAK5_PICGU RecName: Full=ATP-dependent RNA helicase MAK5
gi|146393035|gb|EDK41193.1| hypothetical protein PGUG_05291 [Meyerozyma guilliermondii ATCC
6260]
Length = 754
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 161/304 (52%), Gaps = 37/304 (12%)
Query: 170 TEFDAWN--ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
T+ W+ + L + + GFKEPT IQ+ IP A QGKD+IG A TGSGKTLA
Sbjct: 179 TDLPKWSMENVSLSTYTINGLAGCGFKEPTAIQRKAIPLAL-QGKDVIGKATTGSGKTLA 237
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
+G+PI++R L + E ++ A+I PTRELA QV DH+ ++AK
Sbjct: 238 YGIPILERCLAQLESKTNTIKPPT-------------AMIFAPTRELAHQVVDHMNKIAK 284
Query: 288 GINVR---VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
+ +V I GG+S +KQERLL P ++V TPGR ELM + + V
Sbjct: 285 FSPLAQNGIVSITGGLSIQKQERLLSHGPSILVATPGRCLELMEKSVDLVNRMALTDMIV 344
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
LDEADR++++GHF E + I+DML N+ + ++TQ ++ QTLVFSAT
Sbjct: 345 LDEADRLLQDGHFEEFEKILDML------NKHRPKKTQGV-------SRRWQTLVFSAT- 390
Query: 405 ALSADFRKKLKHGSLKLKQS--VNGLNSIETLSERAGMRANV-AIVDLTNVSVLANKLEE 461
S D KL + + K+S + + L+ + R A++D +++ K+ E
Sbjct: 391 -FSRDLFGKLSNNKPRNKESSFIENDEILSLLNTKLQFRDRTPAVIDANPKEIVSGKVTE 449
Query: 462 SFIE 465
+ +E
Sbjct: 450 ALVE 453
>gi|354546640|emb|CCE43372.1| hypothetical protein CPAR2_210170 [Candida parapsilosis]
Length = 800
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 167/299 (55%), Gaps = 37/299 (12%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEE 239
L P + + L F +PTPIQK IP A +GKD++G A TGSGKTLA+G+PI+++ L+
Sbjct: 186 LSPYTLNGLANLNFTKPTPIQKRTIPIAI-EGKDVVGKATTGSGKTLAYGIPILEKYLQS 244
Query: 240 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK--GINVR-VVPI 296
+ ++++ ++ + P G +I TPTRELA QV DHL ++A+ ++VR +V +
Sbjct: 245 LD----LVKQNVKDQKINRPNG----IIFTPTRELAHQVVDHLNKLAQYSPLSVRGIVSV 296
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
GG++ +KQ+RLLK P ++V TPGR EL + + + VLDEADR++++GH
Sbjct: 297 TGGLAIQKQQRLLKMGPGIIVATPGRFLELCENDSELMKRMSLTDIIVLDEADRLLQDGH 356
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA--LSADFRKKL 414
F E + I+++L T N+ K QTLVFSAT + L K+
Sbjct: 357 FEEFEKILELLGKTRPKNKNVDW--------------KWQTLVFSATFSRDLFGKLDKQQ 402
Query: 415 KHGSLKLKQSVNGLNS-------IETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
K + KQ ++G NS IE L+E+ + ++D +++ ++ E+ +E
Sbjct: 403 KPKAKNQKQQIDG-NSLVQNDEIIELLNEKLHFKDKKPVLIDANPKEIVSGQITEALVE 460
>gi|389641713|ref|XP_003718489.1| ATP-dependent RNA helicase MAK5 [Magnaporthe oryzae 70-15]
gi|374095422|sp|A4REU9.2|MAK5_MAGO7 RecName: Full=ATP-dependent RNA helicase MAK5
gi|351641042|gb|EHA48905.1| ATP-dependent RNA helicase MAK5 [Magnaporthe oryzae 70-15]
gi|440476884|gb|ELQ58053.1| ATP-dependent RNA helicase mak5 [Magnaporthe oryzae P131]
Length = 760
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 164/311 (52%), Gaps = 37/311 (11%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
+ E + + W L L +M SI +L F +PT IQ A IP G D++G A TGS
Sbjct: 177 IDETDEGADVSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPEIL-AGHDVVGKASTGS 235
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 282
GKTLAFG+PI+++ L ++ E E P AL+++PTRELA Q+TDH+
Sbjct: 236 GKTLAFGIPIVEKWLSIN---ASTQSKRVAEGETKTPI----ALVLSPTRELAHQLTDHI 288
Query: 283 KEVAKGINV--RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
K + G+ V + GG+S KQ+R L+ + ++VVGTPGRLWE++S K + +
Sbjct: 289 KNLCAGLATSPYVCSVTGGLSVHKQQRQLE-KADIVVGTPGRLWEVLSSSTKLIQAFRGI 347
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR--KKRQTL 398
F V+DEADR++ GHF++ + I + L ++G + R K RQTL
Sbjct: 348 KFLVVDEADRLLSEGHFKDAKDIFEGLDKVETDDDG-------------IIRGGKARQTL 394
Query: 399 VFSATIALSADFRKKLKH---GSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSV 454
VFSAT F K L+ G + + + S+E L ++ R + +D+ VS
Sbjct: 395 VFSAT------FNKGLQQKLAGKGRFDLATDS-QSMEYLLKKLKFREEIPKFIDVNPVSQ 447
Query: 455 LANKLEESFIE 465
+A L+E +E
Sbjct: 448 MAEGLKEGIVE 458
>gi|440469812|gb|ELQ38909.1| ATP-dependent RNA helicase mak5 [Magnaporthe oryzae Y34]
Length = 760
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 164/311 (52%), Gaps = 37/311 (11%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
+ E + + W L L +M SI +L F +PT IQ A IP G D++G A TGS
Sbjct: 177 IDETDEGADVSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPEIL-AGHDVVGKASTGS 235
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 282
GKTLAFG+PI+++ L ++ E E P AL+++PTRELA Q+TDH+
Sbjct: 236 GKTLAFGIPIVEKWLSIN---ASTQSKRVAEGETKTPI----ALVLSPTRELAHQLTDHI 288
Query: 283 KEVAKGINV--RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
K + G+ V + GG+S KQ+R L+ + ++VVGTPGRLWE++S K + +
Sbjct: 289 KNLCAGLATSPYVCSVTGGLSVHKQQRQLE-KADIVVGTPGRLWEVLSSSTKLIQAFRGI 347
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR--KKRQTL 398
F V+DEADR++ GHF++ + I + L ++G + R K RQTL
Sbjct: 348 KFLVVDEADRLLSEGHFKDAKDIFEGLDKVETDDDG-------------IIRGGKARQTL 394
Query: 399 VFSATIALSADFRKKLKH---GSLKLKQSVNGLNSIETLSERAGMRANVA-IVDLTNVSV 454
VFSAT F K L+ G + + + S+E L ++ R + +D+ VS
Sbjct: 395 VFSAT------FNKGLQQKLAGKGRFDLATDS-QSMEYLLKKLKFREEIPKFIDVNPVSQ 447
Query: 455 LANKLEESFIE 465
+A L+E +E
Sbjct: 448 MAEGLKEGIVE 458
>gi|341883047|gb|EGT38982.1| hypothetical protein CAEBREN_08481 [Caenorhabditis brenneri]
Length = 736
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 138/242 (57%), Gaps = 36/242 (14%)
Query: 170 TEFDAWNELRLHPL-LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
T+ AW +L P +++++ R+GF +PT IQ A +P A D++GAAETGSGKTLAF
Sbjct: 148 TDISAWEKLFFLPTEILQAVERMGFSQPTEIQSAVLPIAVRDRMDVLGAAETGSGKTLAF 207
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 288
G+P++ RLL++ + + P RALII PTREL +Q+ H+ + +
Sbjct: 208 GIPLVSRLLDDISSG---------DQKSSGP----RALIIAPTRELVIQIMRHINALIET 254
Query: 289 INVRVVPIVGGMSTEKQERLL-KARPELVVGTPGRLWELMSGGEK--HLVELHTLSFFVL 345
++ IVGG++ KQ+R++ + RP+++V TPGRLW ++ + +L E L V+
Sbjct: 255 TPLKATSIVGGLAQVKQDRVISQQRPDILVATPGRLWAMIQEANEGDYLAEWRNLKCLVV 314
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
DE DRM+E G+F EL I++ + + C R+K QTLVFSAT+
Sbjct: 315 DETDRMVEEGYFAELTHILNKV-------------HEEC------DREKLQTLVFSATLT 355
Query: 406 LS 407
+
Sbjct: 356 FA 357
>gi|164658650|ref|XP_001730450.1| hypothetical protein MGL_2246 [Malassezia globosa CBS 7966]
gi|159104346|gb|EDP43236.1| hypothetical protein MGL_2246 [Malassezia globosa CBS 7966]
Length = 502
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 156/303 (51%), Gaps = 41/303 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA----AHQGKDIIGAAETGSGKTLAFGL 230
W LHP L ++ LGF +PT +Q A + + + +D++G A+TGSGKTLA+ L
Sbjct: 201 WASYALHPQLKMALKSLGFHKPTDVQAATLRPSLGLESSMPRDVVGIAQTGSGKTLAYAL 260
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV--AKG 288
PI+ +LE A + L ALI+TPTRELALQV H++ V A G
Sbjct: 261 PILHYVLEH-------------SAHTEDTQRDLEALILTPTRELALQVCTHIRAVVDAAG 307
Query: 289 INVRVVPIVGGMSTEKQERLLKAR--PELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
V + GGMS +KQER+L+ ++V TPGRLW+L+ + + + F V+D
Sbjct: 308 RFANVATVCGGMSVQKQERMLQQHGGAHVIVATPGRLWDLLKQDDALALRVRRTRFLVID 367
Query: 347 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 406
EADRMIE GHF E+ SI+ M+ T G+ + QT V+SAT +
Sbjct: 368 EADRMIETGHFAEMDSILSMVRRTKGAVADANSAM--------------QTFVYSAT--M 411
Query: 407 SADFRKKLKHGSLKLKQ---SVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEES 462
+ + LK + KQ + + N+++ L R R +++LT +A+ L E+
Sbjct: 412 TKTLQANLKRAPWRKKQRTAASSNNNTLDDLLARIDFRDPEPVVIELTPQRHVADTLYEA 471
Query: 463 FIE 465
IE
Sbjct: 472 KIE 474
>gi|336262101|ref|XP_003345836.1| hypothetical protein SMAC_07120 [Sordaria macrospora k-hell]
gi|380088610|emb|CCC13496.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 807
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 161/310 (51%), Gaps = 37/310 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L L P ++ SI +L F +PT IQ IP G D+IG A TGSGKTLAFG+P+++
Sbjct: 210 WVPLDLSPRMISSIAKLKFTKPTLIQAQAIPQI-MAGHDVIGKASTGSGKTLAFGIPLVE 268
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--R 292
L E + KGE K ALI++PTRELA Q+ DHL+ + KG+
Sbjct: 269 AWLSAEETRK---QNKGE-------KNGATALILSPTRELAQQIRDHLQALCKGLPTAPY 318
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+ ++GGM+ +KQ+R L A ++V+ TPGR+WE+MS L L +SF VLDEADR++
Sbjct: 319 ICSVLGGMAVQKQKRQL-AVADIVIATPGRMWEVMSSDNSVLAALRNISFLVLDEADRLL 377
Query: 353 ENGHFRELQSIIDMLP--MTNGSNEGQ----------------SEQTQTCVTVSSLQRKK 394
++G F+E + I L +NE Q SE+ + K
Sbjct: 378 KDGSFKEAEEIFKALDRQAVEENNEDQKMGNTDEEGQEQEEEQSEEEEEEEEEEEEPVNK 437
Query: 395 RQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSV 454
RQTLVFSAT + + ++KL G + K + +E L ++ R VD V
Sbjct: 438 RQTLVFSAT--FNKNLQQKL-AGKSRFKAT--STQDMEYLLQKLNFRETPKFVDANPVHQ 492
Query: 455 LANKLEESFI 464
+A L+E I
Sbjct: 493 MAENLKEGLI 502
>gi|241951434|ref|XP_002418439.1| ATP-dependent RNA helicase, putative; maintenance of killer
protein, putative [Candida dubliniensis CD36]
gi|223641778|emb|CAX43740.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 758
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 175/317 (55%), Gaps = 38/317 (11%)
Query: 155 PDDAEEELVS--EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
PDD E L + E ++ + A+ + + +L FK+PTPIQK IP A GK
Sbjct: 161 PDDNEINLPNWQEGDLGSSISAYT--------LYGLSQLNFKKPTPIQKETIPIAL-SGK 211
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 272
D+IG A TGSGKTLA+G+PI+++ ++ + ++++ ++ + P G +I PTR
Sbjct: 212 DVIGKATTGSGKTLAYGIPILEKYIQ----SLNLIKQNNKDNKINHPTG----IIFAPTR 263
Query: 273 ELALQVTDHLKEVAKG--INVR-VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 329
ELA QV DHL +AK ++ R +V I GG+S +KQ+RLL+ P ++V TPGR+ EL+ G
Sbjct: 264 ELAHQVVDHLNSLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPGRMLELIQG 323
Query: 330 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS 389
+ L + VLDEADR++++GHF E + I+++ G N +++ +
Sbjct: 324 DSELAKRLASTDIIVLDEADRLLQDGHFDEFEKILELF----GKNRPENKSIEW------ 373
Query: 390 LQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVD 448
K QTLVFSAT + FRK +H K + ++ L+E+ + ++D
Sbjct: 374 ----KWQTLVFSATFSRDL-FRKLDRHQKGKSSSLMGNDEIVQLLNEKLKFKDKKPTLID 428
Query: 449 LTNVSVLANKLEESFIE 465
+++ ++ E+ +E
Sbjct: 429 ANPKEIVSGQITEALVE 445
>gi|167533855|ref|XP_001748606.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772847|gb|EDQ86493.1| predicted protein [Monosiga brevicollis MX1]
Length = 698
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 154/260 (59%), Gaps = 19/260 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W+E L+P ++K+I +LGF+ PTPIQ+A IP + +DIIG AETGSGKTLA
Sbjct: 268 IPPPLRSWDEAGLNPEMLKAIQKLGFENPTPIQRAAIPIGLN-NRDIIGVAETGSGKTLA 326
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F LP++ ++ +++ E+ + YA +I+ PTR+LA Q+ D + A+
Sbjct: 327 FVLPLLNWIIS----LPQLVREQDIDNGPYA-------VILAPTRDLAQQIEDEANKFAR 375
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ VR+V ++GG S E Q L E+V+ TPGRL +++ + H + L+ S+ V+DE
Sbjct: 376 PLGVRLVSVIGGHSREDQSFKLNQGCEVVIATPGRLIDVL---DNHYMVLNQCSYIVMDE 432
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIAL 406
ADRM++ G E+Q I++ +P++N + + Q + +S + K RQT++F+AT+
Sbjct: 433 ADRMLDMGFEPEVQRILEYIPVSNMKPDTDEAEDQHLLAENSRNKAKYRQTVLFTATMPT 492
Query: 407 SADFRKKLKHGSLKLKQSVN 426
S + +L L+ +VN
Sbjct: 493 SVE---RLARTYLRRPATVN 509
>gi|32564046|ref|NP_871838.1| Protein F55F8.2, isoform b [Caenorhabditis elegans]
gi|351063670|emb|CCD71884.1| Protein F55F8.2, isoform b [Caenorhabditis elegans]
Length = 579
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 147/267 (55%), Gaps = 34/267 (12%)
Query: 188 IYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKML 247
I+ F EPT IQ A +PAA +D++GAAETGSGKTLAFG+P++ RLLE + +
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDS---- 58
Query: 248 EEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQER 307
++ E E P RALI+ PTREL +Q+ H+ + + IVGG++ KQER
Sbjct: 59 -QETESTEVRGP----RALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQER 113
Query: 308 LL-KARPELVVGTPGRLWELMSGGE--KHLVELHTLSFFVLDEADRMIENGHFRELQSII 364
++ + RP++VV TPGRLW +M E + L E L V+DE DRM+E G+F EL I+
Sbjct: 114 IISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHIL 173
Query: 365 DMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQS 424
N+ E +++K QTLVFSAT+ + + + K +
Sbjct: 174 ---------NKIHEES----------EKEKLQTLVFSATLTFAK--AQDVAEEEKKKAKE 212
Query: 425 VNGLNSIETLSERAGMRANV-AIVDLT 450
++ I+ L + G+R N ++DLT
Sbjct: 213 LSSQQKIQRLIKLTGLRENKHKVIDLT 239
>gi|443896134|dbj|GAC73478.1| RNA helicase [Pseudozyma antarctica T-34]
Length = 886
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 168/348 (48%), Gaps = 59/348 (16%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA-------------------AHQ 210
+ AW+ L LH L +++ GF PT IQ IP A A +
Sbjct: 224 SSLPAWSHLPLHAALKRALAHKGFHSPTEIQNRSIPLALGLQQDDSSDSDEPSTSSSAFK 283
Query: 211 GKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 270
+D++G ++TGSGKTLA+GLPI+ L E + P G ALI+ P
Sbjct: 284 KRDVVGVSQTGSGKTLAYGLPILNYLFHNAENVA----SAPTHGDVPPPLG---ALILCP 336
Query: 271 TRELALQVTDHLKEVAKGINV--------------RVVPIVGGMSTEKQERLLKARP--- 313
TRELALQV+ HL +V + + ++ + GGMS KQ RLL+ R
Sbjct: 337 TRELALQVSAHLTDVIRSSCLVDDTLSYAKLVRRPQIAVVCGGMSEHKQRRLLQGRSRRA 396
Query: 314 --ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 371
+++V TPGRLWE+ ++ + + F VLDEADRM++ GHF E++ I++++
Sbjct: 397 GVDIIVATPGRLWEMTRLDDELAARIKQVRFLVLDEADRMVQVGHFAEMEHILNLVHRAE 456
Query: 372 GSN--EGQSEQTQT------CVTVSSLQR--KKRQTLVFSATI--ALSADF--RKKLKHG 417
EGQ Q V V R QT VFSAT+ AL + R+KL
Sbjct: 457 AQRPKEGQDGQQSDSDGESGAVVVGEGVRPNAAMQTFVFSATLSKALQTNLKRRRKLPQF 516
Query: 418 SLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
+ K + +++E L ER R++ AIVDLT L + L E+ +E
Sbjct: 517 TKKRHSKRSAGSTLEELLERIDFRSSPAIVDLTPAQGLPSGLMETKLE 564
>gi|242045284|ref|XP_002460513.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
gi|241923890|gb|EER97034.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
Length = 760
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 162/308 (52%), Gaps = 59/308 (19%)
Query: 99 SANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDA 158
S +EE GD +GDEDG+ + E + +++ ++ ++GP D
Sbjct: 122 SGDEEASGDREGDEDGSDEEGGSELGEEEDAHEEEDMAEQND-----------TSGPVDP 170
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
+ S S +++ EL L L+++ LG+++PTPIQ ACIP A G+DI G+A
Sbjct: 171 SKFFASSEGASFHANSFLELNLSRPLVRACEALGYQKPTPIQAACIPLAL-TGRDICGSA 229
Query: 219 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELAL 276
TGSGKT AF LP+++RLL + PK +R LI+TPTRELA
Sbjct: 230 ITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILTPTRELAA 270
Query: 277 QVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 336
QV ++++A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + + V
Sbjct: 271 QVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLS--VG 328
Query: 337 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 396
L L+ +LDEADR++E G E+Q +I M P K+RQ
Sbjct: 329 LEDLAVVILDEADRLLELGFSAEIQELIRMCP------------------------KRRQ 364
Query: 397 TLVFSATI 404
T++FSAT+
Sbjct: 365 TMLFSATM 372
>gi|291001145|ref|XP_002683139.1| predicted protein [Naegleria gruberi]
gi|284096768|gb|EFC50395.1| predicted protein [Naegleria gruberi]
Length = 460
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 126/202 (62%), Gaps = 12/202 (5%)
Query: 188 IYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL--LEEREKAGK 245
+YRLGF +PTPIQ+ IP A Q DI+ AAETGSGKTLAF LPI+ L L+E E A +
Sbjct: 1 LYRLGFYKPTPIQEESIPKAIGQQADILAAAETGSGKTLAFVLPIIDELMKLKENEPAQQ 60
Query: 246 MLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ 305
+ ++ E LR+LI+ PTRELALQV H++ V + +++VV +VGG++ EKQ
Sbjct: 61 V-----KDDESRTDMFQLRSLILLPTRELALQVCSHIEAVIRNTSLKVVGLVGGLNEEKQ 115
Query: 306 ERLLKA-RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 364
R + +P+++V TPGR W + G + L F V+DEADRM+ + HF ELQSI+
Sbjct: 116 IREIHVQKPDIIVATPGRYWFYIDKGMFASNSILGLRFLVIDEADRMVADAHFFELQSIL 175
Query: 365 DMLPM----TNGSNEGQSEQTQ 382
+ + N N+ + EQ +
Sbjct: 176 RYITIERFKRNYINQKEEEQVE 197
>gi|380478434|emb|CCF43606.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 779
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 163/308 (52%), Gaps = 28/308 (9%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
V EAE + W +L L P + +I +L F +PT IQ + IP G D+IG A TGS
Sbjct: 204 VEEAEEDLDMTPWVDLGLSPATVSAIAKLKFAKPTKIQASTIPEIL-AGHDVIGKASTGS 262
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 282
GKTLAF +PI++ L++ EEK + + ALI++PTRELA Q+T+H+
Sbjct: 263 GKTLAFSIPIVEDWLDK-------YEEKADGGKPEKADNTPLALILSPTRELAHQITNHI 315
Query: 283 KEVAKG-INVR-VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
K + G +N V + GG+S KQ+R L A+ ++V+GTPGRLWE++SG + L +
Sbjct: 316 KNLCAGLVNAPFVCSVTGGLSVFKQQRQL-AKADIVIGTPGRLWEVISGSRELLAGFRQI 374
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 400
+ V+DEADR++ GHF+E I+D L + + ++ RQTLVF
Sbjct: 375 RYLVVDEADRLLSEGHFKEAGEILDALDREVIEEDDDDDDEKSL--------SARQTLVF 426
Query: 401 SATI--ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLAN 457
SAT L K K G + ++ S+E L ++ R +D+ +A+
Sbjct: 427 SATFHQGLQQKLAGKGKWGLMSEEE------SMEYLLKKLNFREEKPKFIDVNPAKQMAS 480
Query: 458 KLEESFIE 465
L+E IE
Sbjct: 481 GLKEGLIE 488
>gi|344303044|gb|EGW33318.1| hypothetical protein SPAPADRAFT_50211 [Spathaspora passalidarum
NRRL Y-27907]
Length = 781
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 183/340 (53%), Gaps = 44/340 (12%)
Query: 145 VEESVTVSNGPDDAEEELVSEA-----------EIST-EFDAWNELRLHPLLMKSIYRLG 192
VEE+ + PD+ E+EL + A EI E+ + + L P + + L
Sbjct: 147 VEETEEIDEKPDELEKELSANAFANLDLPLPDDEIDLPEWQSEDLSSLSPYTLNGLSVLN 206
Query: 193 FKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGE 252
F +PTPIQK IP A +GKD+IG A TGSGKTLA+G+PI+++ L + +++K
Sbjct: 207 FSKPTPIQKKAIPLAL-EGKDVIGKATTGSGKTLAYGIPILEKYLSSLSTIKQNVKDKIV 265
Query: 253 EAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG--INVR-VVPIVGGMSTEKQERLL 309
P G ++ PTRELA QV HL E+AK ++ R +V I GG+S +KQERLL
Sbjct: 266 NN----PTG----IVFAPTRELAHQVVSHLNELAKYSPLSTRGIVSITGGLSIQKQERLL 317
Query: 310 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
P ++V TPGR EL+ E+ + + VLDEADR++++GHF E + I+++
Sbjct: 318 AHGPGIIVATPGRFLELLQNDEQLTKRMASTDILVLDEADRLLQDGHFEEFEKILELFGK 377
Query: 370 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL-KHGSLKLK-QSVNG 427
+ N+ S+Q K QTLVFSAT S D KL KH K K S+
Sbjct: 378 SRPKNK-------------SMQW-KWQTLVFSAT--FSRDLFGKLDKHQKNKAKGNSLMD 421
Query: 428 LNSIET-LSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
+ I T L+E+ + + A++D +++ ++ E+ +E
Sbjct: 422 NDEIVTLLNEKLKFKDSKPALIDANPKEIVSGQITEALVE 461
>gi|358057375|dbj|GAA96724.1| hypothetical protein E5Q_03394 [Mixia osmundae IAM 14324]
Length = 751
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 219/473 (46%), Gaps = 103/473 (21%)
Query: 52 FLVGS-NELDGGFLSLEEIDEASYNLQIPKP---------EKGKPGKKTNTKKRKRSSAN 101
F+ G+ +E+ GG L EE+D+ ++ + + +P K+T T K SS
Sbjct: 27 FVSGAEDEVAGGLLDFEEVDDVQVITELDESGNKHFRFLVAEAEPEKETATPTAKPSSI- 85
Query: 102 EEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAE-- 159
KK+ K K ++I+ +++ + S PDDAE
Sbjct: 86 -----------------------------KKRTKDTKAEQIRHEDDTASTSAQPDDAEPA 116
Query: 160 ------EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP---AAAHQ 210
++L+ E + + + LHP L ++ LGF +PTPIQ+A A
Sbjct: 117 SGTADADQLLREFDFA-HLPGYVPQSLHPALAHAMLELGFSKPTPIQRATFDIMLGADAV 175
Query: 211 GKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 270
KDI+G A+TGSGKTLA+GLPI+ ++ + K P+ L ALI+ P
Sbjct: 176 LKDIMGIAQTGSGKTLAYGLPILD----------QIFRQNARWPSKEQPR-KLTALILLP 224
Query: 271 TRELALQVTDHLKEV-----AKGINVR-----------VVPIVGGMSTEKQERLLKARP- 313
TRELA+QV HL V + GI+ + +V +VGG+S KQ R L
Sbjct: 225 TRELAMQVKTHLATVITNASSAGIDTKGKGKGPYPFANIVAVVGGISVLKQRRQLAVDRG 284
Query: 314 -ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN- 371
+++V TPGRLWE++ + ++ L + VLDEADRM++ GHF EL I+D+ N
Sbjct: 285 IDIIVATPGRLWEMIDDDDDLARKIAALDYLVLDEADRMVQAGHFVELDKILDLTRRGNS 344
Query: 372 --------------GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG 417
+ +Q +V + +T++FSAT LS D + L
Sbjct: 345 SSISHDSSAPDVDIADQDKPDDQAFAEQSVRPNGNPRMRTMIFSAT--LSKDLQVNLSIP 402
Query: 418 SLK----LKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
L+ ++++ +I+ L + R + A+++L+++ + L+E F++
Sbjct: 403 HLRNLRAIRKAGGSQGAIDDLLLKIDFRDPDPALINLSSMQGTVDTLQECFVD 455
>gi|358057374|dbj|GAA96723.1| hypothetical protein E5Q_03395 [Mixia osmundae IAM 14324]
Length = 750
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 219/473 (46%), Gaps = 103/473 (21%)
Query: 52 FLVGS-NELDGGFLSLEEIDEASYNLQIPKP---------EKGKPGKKTNTKKRKRSSAN 101
F+ G+ +E+ GG L EE+D+ ++ + + +P K+T T K SS
Sbjct: 27 FVSGAEDEVAGGLLDFEEVDDVQVITELDESGNKHFRFLVAEAEPEKETATPTAKPSSI- 85
Query: 102 EEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAE-- 159
KK+ K K ++I+ +++ + S PDDAE
Sbjct: 86 -----------------------------KKRTKDTKAEQIRHEDDTASTSAQPDDAEPA 116
Query: 160 ------EELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP---AAAHQ 210
++L+ E + + + LHP L ++ LGF +PTPIQ+A A
Sbjct: 117 SGTADADQLLREFDFA-HLPGYVPQSLHPALAHAMLELGFSKPTPIQRATFDIMLGADAV 175
Query: 211 GKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 270
KDI+G A+TGSGKTLA+GLPI+ ++ + K P+ L ALI+ P
Sbjct: 176 LKDIMGIAQTGSGKTLAYGLPILD----------QIFRQNARWPSKEQPR-KLTALILLP 224
Query: 271 TRELALQVTDHLKEV-----AKGINVR-----------VVPIVGGMSTEKQERLLKARP- 313
TRELA+QV HL V + GI+ + +V +VGG+S KQ R L
Sbjct: 225 TRELAMQVKTHLATVITNASSAGIDTKGKGKGPYPFANIVAVVGGISVLKQRRQLAVDRG 284
Query: 314 -ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN- 371
+++V TPGRLWE++ + ++ L + VLDEADRM++ GHF EL I+D+ N
Sbjct: 285 IDIIVATPGRLWEMIDDDDDLARKIAALDYLVLDEADRMVQAGHFVELDKILDLTRRGNS 344
Query: 372 --------------GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG 417
+ +Q +V + +T++FSAT LS D + L
Sbjct: 345 SSISHDSSAPDVDIADQDKPDDQAFAEQSVRPNGNPRMRTMIFSAT--LSKDLQVNLSIP 402
Query: 418 SLK----LKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
L+ ++++ +I+ L + R + A+++L+++ + L+E F++
Sbjct: 403 HLRNLRAIRKAGGSQGAIDDLLLKIDFRDPDPALINLSSMQGTVDTLQECFVD 455
>gi|346327471|gb|EGX97067.1| ATP dependent RNA helicase, putative [Cordyceps militaris CM01]
Length = 852
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 177/355 (49%), Gaps = 29/355 (8%)
Query: 121 QEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRL 180
++ L+ KK+K G ++ + + + DD E + W L L
Sbjct: 190 HDRKLEAAAADTIKKQKGGAQVNPFD---VLMDAQDDENE---------ANLEDWVALNL 237
Query: 181 HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEER 240
P ++ +I +LGF PT IQ IP + G D+IG A+TGSGKTLAFG+PI++R LE
Sbjct: 238 SPAIVSAIGKLGFTSPTAIQAESIPPI-NAGADVIGKAQTGSGKTLAFGIPIVERWLELH 296
Query: 241 EKAGKMLEEKGEEAEKYAPKGHLR----ALIITPTRELALQVTDHLKEVAKGI---NVRV 293
+E G+E E R A+I++PTRELA Q+ DHL+ + G+ + RV
Sbjct: 297 ADKDGTDDEDGDEEEAEQDGASSRKGPTAVILSPTRELAKQIGDHLRALCAGLPAASPRV 356
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHT-LSFFVLDEADRMI 352
+ GG+S KQ+R L+ ++VVGTPGRLWE++ G + L F V+DEADR+
Sbjct: 357 CVVTGGLSVHKQQRQLRT-ADVVVGTPGRLWEVLDGDAALQAAFRSRLRFLVVDEADRLF 415
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 412
+ G F+E + II L G +E E+ + V RQTLVFSAT D +
Sbjct: 416 KVGQFKEAELIIGALDRRAGGSESDDEEDEEEVDEGDEGSWSRQTLVFSAT--FDKDLQM 473
Query: 413 KLKHGSLKLKQSVNGLN--SIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
KL K + S G + + L R +D+ VS +A L E IE
Sbjct: 474 KLAG---KKRPSAQGTDEEKMADLMRCLKFRGQPTFIDVNPVSQMAEGLREGLIE 525
>gi|448512603|ref|XP_003866769.1| Mak5 nucleolar DEAD-box RNA helicase [Candida orthopsilosis Co
90-125]
gi|380351107|emb|CCG21330.1| Mak5 nucleolar DEAD-box RNA helicase [Candida orthopsilosis Co
90-125]
Length = 800
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 167/308 (54%), Gaps = 41/308 (13%)
Query: 175 WNE----LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
W+E + L P + + L F PTPIQK IP A +GKD++G A TGSGKTLA+G+
Sbjct: 177 WSERELGVSLSPYTLNGLAILNFTTPTPIQKRTIPIAL-EGKDVVGKATTGSGKTLAYGI 235
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK--G 288
PI+++ L+ ++ + ++EK H +I TPTRELA QV DHL ++A+
Sbjct: 236 PILEKYLQSLDQVKQNVKEKK--------INHPNGVIFTPTRELAHQVVDHLNKLAQYSP 287
Query: 289 INVR-VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
++V+ +V + GG++ +KQ+RLLK P ++V TPGR EL + + VLDE
Sbjct: 288 LSVKGIVSVTGGLAIQKQQRLLKMGPGIIVATPGRFLELCENDPELAKRMSLTDIVVLDE 347
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-- 405
ADR++++GHF E + I+++ G N +++ K QTLVFSAT +
Sbjct: 348 ADRLLQDGHFEEFEKILELF----GKNRPKNKNIAW----------KWQTLVFSATFSRD 393
Query: 406 LSADFRKKLKHGSLKLKQSVNGLNS-------IETLSERAGMRANVAI-VDLTNVSVLAN 457
L K+ K KQ ++G NS IE L+E+ + I +D +++
Sbjct: 394 LFGKLDKQQKPKIKNQKQQIDG-NSLVQNDEIIELLNEKLNFKDKKPILIDANPKEIVSG 452
Query: 458 KLEESFIE 465
++ E+ +E
Sbjct: 453 QITEALVE 460
>gi|402081834|gb|EJT76979.1| ATP-dependent RNA helicase MAK5 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 760
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 159/299 (53%), Gaps = 39/299 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L L ++ SI RL F +PT IQ IP G D+IG A TGSGKTLAFG+PI++
Sbjct: 196 WVPLDLSGEMLSSIARLKFSKPTAIQAQAIPEIL-AGHDVIGKASTGSGKTLAFGIPIVE 254
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--R 292
R + + A E+G++ AL+++PTRELA Q+T+H K + G+
Sbjct: 255 RWISLSQTAASKSPEEGKKP---------IALVLSPTRELAHQITNHFKALCGGLATAPY 305
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+ + GG+S KQ+R L+ + ++V+ TPGRLWE++S ++ + + + V+DEADR++
Sbjct: 306 ICSVTGGLSVHKQQRQLE-KADIVIATPGRLWEVLSSSKQTVAAFRHIKYLVVDEADRLL 364
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 412
+GHF++ + I+ L ++ +T + RQTLVFSAT F K
Sbjct: 365 SDGHFKDAEEIMRAL-----------DRIETTEDRDNQGPPPRQTLVFSAT------FNK 407
Query: 413 KLKH-----GSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEESFIE 465
L+ G L N S+E L +R R +D+ VS +A +L+E +E
Sbjct: 408 GLQQKLAGKGRFDLN---NDALSMEYLLKRLKFREEKPKFIDVNPVSQMAARLKEGLVE 463
>gi|357459393|ref|XP_003599977.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355489025|gb|AES70228.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 828
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 134/239 (56%), Gaps = 48/239 (20%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPI 232
D++ +L L L+++ LG+ +PTPIQ ACIP A G+DI G+A TGSGKT AF LP
Sbjct: 151 DSFLQLNLSRPLLRACEVLGYSKPTPIQAACIPLAL-TGRDICGSAITGSGKTAAFALPT 209
Query: 233 MQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKEVAKGIN 290
++RLL + PK +R LI+TPTRELA QV +K +++ +
Sbjct: 210 LERLL-------------------FRPKRVHAIRVLILTPTRELAAQVQSMIKSLSQFTD 250
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+R IVGG+ST++QE L++RP++VV TPGR+ + + V+L LS +LDEADR
Sbjct: 251 IRCCLIVGGLSTKEQEVALRSRPDIVVATPGRMIDHLRNSMS--VDLDDLSVLILDEADR 308
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
++E G E+Q ++ + P KKRQT++FSAT+ D
Sbjct: 309 LLELGFSAEIQELVRVCP------------------------KKRQTMLFSATMTEEVD 343
>gi|358395256|gb|EHK44643.1| hypothetical protein TRIATDRAFT_172944, partial [Trichoderma
atroviride IMI 206040]
Length = 785
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 195/402 (48%), Gaps = 57/402 (14%)
Query: 97 RSSANEEDPGDGDGDEDGNGVQKEQEKNLKN----QKGKKKK------KKKKGKKIKTVE 146
R + +E G GDG +G V Q + K Q GKKK KK GKK K +
Sbjct: 115 RDAVDEPVEGPGDGAVEGENVDSGQAGDSKGGVEGQGGKKKAAGKDGAKKDAGKKQKARK 174
Query: 147 ESVTVSNGPDDAEEELVSEA----EISTEFDA-----------------WNELRLHPLLM 185
+ +N A++EL A + FDA W EL L ++
Sbjct: 175 DKDN-NNKLAAADKELQKPASRKQQQGNSFDALMAVGDAAAAEEADMGAWVELNLSTRIL 233
Query: 186 KSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGK 245
+I +LGF +PT IQ+ IP G+D+IG A+TGSGKTLAFG+PI+++ LE
Sbjct: 234 SAIAKLGFAKPTLIQEKTIPEIL-AGEDVIGKAQTGSGKTLAFGIPIVEKWLE------- 285
Query: 246 MLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--RVVPIVGGMSTE 303
L E+ ++ P A++++PTRELA Q++DH+K + G+ V + GG+S
Sbjct: 286 -LYEERRNVKREGPT----AVVLSPTRELAKQLSDHIKALCDGLPTAPYVCTVTGGLSIH 340
Query: 304 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 363
KQ+R L+ + ++V+ TPGRLWE++ G + F V+DEADR+ + G F+E + I
Sbjct: 341 KQQRQLE-KADIVIATPGRLWEVLDGDMSLQNSFTKIKFLVVDEADRLFKAGQFKEAEDI 399
Query: 364 IDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQ 423
I L + + + RQTLVFSAT + + ++ + K
Sbjct: 400 IGAL---------DRKDPDAEDDDDNEELPPRQTLVFSATFDKNLQSKLAVRGKAPKAGA 450
Query: 424 SVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
+ +E L + R+ +D+ S +A+ L+E IE
Sbjct: 451 GSSDEEKMEYLMKSLKFRSEPKFIDVNPASQMASGLKEGLIE 492
>gi|226509858|ref|NP_001147574.1| ATP-dependent RNA helicase DRS1 [Zea mays]
gi|195612276|gb|ACG27968.1| ATP-dependent RNA helicase DRS1 [Zea mays]
Length = 770
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 145/263 (55%), Gaps = 50/263 (19%)
Query: 144 TVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
TVE++ T +GP D S + +++ EL L L+++ LG+++PTPIQ AC
Sbjct: 135 TVEQNET--SGPVDPSNFFASSEGATFHANSFLELNLSRPLVRACEALGYQKPTPIQAAC 192
Query: 204 IPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--G 261
IP A G+DI G+A TGSGKT AF LP+++RLL + PK
Sbjct: 193 IPLAL-TGRDICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVP 232
Query: 262 HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPG 321
+R LI+TPTRELA QV ++++A+ ++R IVGG+ST+ QE L++ P++VV TPG
Sbjct: 233 AIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPG 292
Query: 322 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT 381
R+ + + V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 293 RIIDHLRNSLS--VGLEDLAVVILDEADRLLELGFSAEIQELIRMCP------------- 337
Query: 382 QTCVTVSSLQRKKRQTLVFSATI 404
K+RQT++FSAT+
Sbjct: 338 -----------KRRQTMLFSATM 349
>gi|414886235|tpg|DAA62249.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 770
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 145/263 (55%), Gaps = 50/263 (19%)
Query: 144 TVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
TVE++ T +GP D S + +++ EL L L+++ LG+++PTPIQ AC
Sbjct: 135 TVEQNET--SGPVDPSNFFASSEGATFHANSFLELNLSRPLVRACEALGYQKPTPIQAAC 192
Query: 204 IPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--G 261
IP A G+DI G+A TGSGKT AF LP+++RLL + PK
Sbjct: 193 IPLAL-TGRDICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVP 232
Query: 262 HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPG 321
+R LI+TPTRELA QV ++++A+ ++R IVGG+ST+ QE L++ P++VV TPG
Sbjct: 233 AIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPG 292
Query: 322 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT 381
R+ + + V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 293 RIIDHLRNSLS--VGLEDLAVVILDEADRLLELGFSAEIQELIRMCP------------- 337
Query: 382 QTCVTVSSLQRKKRQTLVFSATI 404
K+RQT++FSAT+
Sbjct: 338 -----------KRRQTMLFSATM 349
>gi|19112899|ref|NP_596107.1| ATP-dependent RNA helicase Mak5 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74582436|sp|O74393.1|MAK5_SCHPO RecName: Full=ATP-dependent RNA helicase mak5
gi|3560140|emb|CAA20727.1| ATP-dependent RNA helicase Mak5 (predicted) [Schizosaccharomyces
pombe]
Length = 648
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 154/299 (51%), Gaps = 49/299 (16%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
+ AW L P ++ S+ + GF +P PIQ IP A+ G DIIG A+TGSGKTLAFG
Sbjct: 119 VDVSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEAS-IGFDIIGKADTGSGKTLAFG 177
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 289
+PI++ L + KY ++AL++ PTRELA Q+ H + +
Sbjct: 178 IPILEHCLRNVDA-------------KY-----VQALVVAPTRELAHQICQHFELIKPSP 219
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV-ELHTLSFFVLDEA 348
N+RV+ I GG++ +KQ+RLL P +VV TPGRLW +++ E +L + VLDEA
Sbjct: 220 NIRVMSITGGLAVQKQQRLLNKHPHVVVATPGRLWSVIN--ENNLTGNFKKIKCLVLDEA 277
Query: 349 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--AL 406
DR+++ HF EL ++++L G TQ RQT +FSAT L
Sbjct: 278 DRLLQKSHFEELSKLLEIL--------GNPMHTQ------------RQTFIFSATFDEGL 317
Query: 407 SADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
+K +K G++ K + + +E + + +D S +A+++ E IE
Sbjct: 318 QQRLKKNMK-GNITEKYN----SPMENMLKEVRFFGKPKFLDANPQSAVASRVLEGLIE 371
>gi|167385322|ref|XP_001737297.1| ATP-dependent RNA helicase mak5 [Entamoeba dispar SAW760]
gi|165899942|gb|EDR26421.1| ATP-dependent RNA helicase mak5, putative [Entamoeba dispar SAW760]
Length = 586
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 159/297 (53%), Gaps = 53/297 (17%)
Query: 168 ISTEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
+ E W +L +L +++++Y LGF PT IQ+ I A KD++G+A TGSGKTL
Sbjct: 42 LVIEMKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHKDVVGSAPTGSGKTL 101
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 286
+F +PI+QRL+E +K + + +II PTRELA+Q+ +H K++
Sbjct: 102 SFLIPIVQRLIE---------LDKIDSTQ---------CVIIVPTRELAVQINEHFKKLI 143
Query: 287 KGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFFV 344
K + IVGGM+ KQ RLL P +V+GTPGRL+EL S E ++++ L + F V
Sbjct: 144 KYLPQFTSSVIVGGMAIPKQVRLLSQEPTIVIGTPGRLYELYSETEHNVLQTLPEIPFIV 203
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
LDEADR++E GHF EL ++D+ K++QT VFSAT+
Sbjct: 204 LDEADRLLEKGHFIELTKLLDV-----------------------FNNKEKQTFVFSATM 240
Query: 405 ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEE 461
L+++ K K S NG + + + ++ M + ++D++ ++EE
Sbjct: 241 ILASEMMAK--------KYSSNGEDELTRMLQKLKMN-DTELIDVSTPQQTVEQMEE 288
>gi|307104921|gb|EFN53172.1| hypothetical protein CHLNCDRAFT_25981 [Chlorella variabilis]
Length = 459
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 122/202 (60%), Gaps = 23/202 (11%)
Query: 263 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 322
LRALI+ PTRELALQV +HL+ V KG + VVPIVGG+S KQERLL PE+VV TPGR
Sbjct: 4 LRALILAPTRELALQVCEHLQAVGKGCGIWVVPIVGGISALKQERLLAKHPEVVVATPGR 63
Query: 323 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 382
L +LM G HL L LSF V+DEADRM++ GH+ EL SI+ +P
Sbjct: 64 LLDLMRAGHAHLTHLSRLSFLVIDEADRMVQQGHYGELSSILGAIPRRQ----------- 112
Query: 383 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 442
Q+ + QT VFSAT+ L A R++L+ G S + +++L ++ R
Sbjct: 113 --------QQARLQTFVFSATLTLPASLRRRLRKGGGGASGSSD----LDSLMDKIPFRG 160
Query: 443 NVAIVDLTNVSVLANKLEESFI 464
IVDLT+ LA+K+EE+++
Sbjct: 161 KPKIVDLTSQRRLADKVEEAYL 182
>gi|224014332|ref|XP_002296829.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968684|gb|EED87030.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 884
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 122/187 (65%), Gaps = 6/187 (3%)
Query: 189 YRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL--LEEREKAGKM 246
+ L + PTPIQ + +PAA +D++GAA TGSGKTL++GLPI+Q + L++ E A +
Sbjct: 207 HSLNYSYPTPIQASTLPAAILGRRDVVGAAPTGSGKTLSYGLPILQWVLGLDDAEIAA-L 265
Query: 247 LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQE 306
EE +A + K L+ALI+ PTRELA+QVT L + V + IVGG + KQ+
Sbjct: 266 DEEDSADAGEPKQKRPLQALILVPTRELAIQVTSELA-IVSCHKVPIGTIVGGFAEVKQK 324
Query: 307 RLL-KARPELVVGTPGRLWELMSGGE-KHLVELHTLSFFVLDEADRMIENGHFRELQSII 364
R+L + RP ++V TPGRLWELMS E HL ++ L F V+DEADRMI+ G F +L+ I
Sbjct: 325 RVLERKRPGVLVATPGRLWELMSSNEYSHLNDMSQLRFLVIDEADRMIKQGSFPQLKQIF 384
Query: 365 DMLPMTN 371
+++ N
Sbjct: 385 EVINQAN 391
>gi|414589946|tpg|DAA40517.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 773
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 145/263 (55%), Gaps = 50/263 (19%)
Query: 144 TVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
TV+++ T +GP D S S +++ EL L L+++ LG+++PTPIQ AC
Sbjct: 140 TVDQNDT--SGPVDPSNFFSSSDRASFHANSFLELNLSRPLVRACEALGYQKPTPIQAAC 197
Query: 204 IPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--G 261
IP A G+DI G+A TGSGKT AF LP+++RLL + PK
Sbjct: 198 IPLAL-TGRDICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVP 237
Query: 262 HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPG 321
+R LI+TPTRELA Q+ ++++A+ ++R IVGG+ST+ QE L++ P++VV TPG
Sbjct: 238 AIRVLILTPTRELAAQIHSMVEKLAQFTDIRCCLIVGGLSTKIQEVALRSMPDIVVATPG 297
Query: 322 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT 381
R+ + + V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 298 RIIDHLRNSLS--VGLEDLAVVILDEADRLLELGFSAEIQELIRMCP------------- 342
Query: 382 QTCVTVSSLQRKKRQTLVFSATI 404
K+RQT++FSAT+
Sbjct: 343 -----------KRRQTMLFSATM 354
>gi|414589947|tpg|DAA40518.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein,
partial [Zea mays]
Length = 786
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 145/263 (55%), Gaps = 50/263 (19%)
Query: 144 TVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
TV+++ T +GP D S S +++ EL L L+++ LG+++PTPIQ AC
Sbjct: 156 TVDQNDT--SGPVDPSNFFSSSDRASFHANSFLELNLSRPLVRACEALGYQKPTPIQAAC 213
Query: 204 IPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--G 261
IP A G+DI G+A TGSGKT AF LP+++RLL + PK
Sbjct: 214 IPLAL-TGRDICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVP 253
Query: 262 HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPG 321
+R LI+TPTRELA Q+ ++++A+ ++R IVGG+ST+ QE L++ P++VV TPG
Sbjct: 254 AIRVLILTPTRELAAQIHSMVEKLAQFTDIRCCLIVGGLSTKIQEVALRSMPDIVVATPG 313
Query: 322 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQT 381
R+ + + V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 314 RIIDHLRNSLS--VGLEDLAVVILDEADRLLELGFSAEIQELIRMCP------------- 358
Query: 382 QTCVTVSSLQRKKRQTLVFSATI 404
K+RQT++FSAT+
Sbjct: 359 -----------KRRQTMLFSATM 370
>gi|323507773|emb|CBQ67644.1| related to MAK5-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 946
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 173/368 (47%), Gaps = 76/368 (20%)
Query: 171 EFD-----AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA------------------ 207
EFD AW+ L LH L +++ GFK+PT IQ IP A
Sbjct: 235 EFDHKLLPAWSHLPLHAALKRALAHKGFKKPTEIQNRSIPLALGLQQEAASSDDSDDAAA 294
Query: 208 ------AHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG 261
+ + +D++G ++TGSGKTLA+GLPI+ L E E A + P G
Sbjct: 295 ANSSSSSRRKRDVVGVSQTGSGKTLAYGLPILNYLFENAENAIASFSRPSTTDDVPPPLG 354
Query: 262 HLRALIITPTRELALQVTDHLKEVAKGINV--------------------RVVPIVGGMS 301
ALI+ PTRELALQV+ HL E+ + + ++ + GGMS
Sbjct: 355 ---ALILCPTRELALQVSSHLTEIVRASCLVSSTTGDEDEISHKKLLRRPQIAVVCGGMS 411
Query: 302 TEKQERLLKARP---------ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+KQ RLL R +++V TPGRLWE+ + + F VLDEADRM+
Sbjct: 412 EQKQRRLLDGRSRQGDRKAGVDIIVATPGRLWEMTRLDDNLAARIKQTRFLVLDEADRMV 471
Query: 353 ENGHFRELQSIIDMLPMTNG--SNEG------QSEQTQTCVTVSSLQ-RKKRQTLVFSAT 403
E GHF E++ I++++ + G +EG Q + ++ V ++ QT VFSAT
Sbjct: 472 EVGHFAEMEHILNLVNRSEGRRPSEGKDGQLPQDDDDESEVETHGVKPSANMQTFVFSAT 531
Query: 404 I--ALSADFRKKLKHGSLKLKQSVN---GLNSIETLSERAGMRANV-AIVDLTNVSVLAN 457
+ AL + +++ K K+ +++ L +R R + A++DLT L
Sbjct: 532 LSKALQINLKRRRKQKQFTKKRHSKRKENATTLDELMDRVDFRDDSPAVIDLTPGQGLPE 591
Query: 458 KLEESFIE 465
L E+ IE
Sbjct: 592 GLMETKIE 599
>gi|358389222|gb|EHK26814.1| hypothetical protein TRIVIDRAFT_175608 [Trichoderma virens Gv29-8]
Length = 770
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 185/390 (47%), Gaps = 57/390 (14%)
Query: 106 GDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDD-------A 158
G GDG +G V Q + + K+ +KK +K + E+ N A
Sbjct: 110 GPGDGPVEGEDVHPGQAGDSQGGVESKRSQKKAARKDRAKEQKKEADNKHKSRDGKLATA 169
Query: 159 EEEL---VSEAEISTEFDA----------------WNELRLHPLLMKSIYRLGFKEPTPI 199
E+EL S + FDA W EL L + +I +LGF +PT I
Sbjct: 170 EKELQKPASHKQQGNSFDALMAVDDAAAEEADMGAWVELNLSTRTVSAIAKLGFSKPTLI 229
Query: 200 QKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAP 259
Q+ IP G D+IG A+TGSGKTLAFG+PI+++ LE L ++ P
Sbjct: 230 QQKTIPEIL-AGDDVIGKAQTGSGKTLAFGIPIVEKWLE--------LYVDKTNVKREGP 280
Query: 260 KGHLRALIITPTRELALQVTDHLKEVAKGINV--RVVPIVGGMSTEKQERLLKARPELVV 317
A++++PTRELA Q++DH+K + G+ V + GG+S KQ+R L+ + ++V+
Sbjct: 281 T----AVVLSPTRELAKQISDHIKALCDGLPTAPYVCTVTGGLSIHKQQRQLE-KADIVI 335
Query: 318 GTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQ 377
TPGRLWE++ G + F V+DEADR+ + G F+E + II L
Sbjct: 336 ATPGRLWEVLDGDMSLQDSFTKIKFLVVDEADRLFKAGQFKEAEDIIGAL---------- 385
Query: 378 SEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLN--SIETLS 435
+ + RQTLVFSAT + + KL G K ++ G + +E L
Sbjct: 386 DRRDPEADDEDDDELPPRQTLVFSAT--FDKNLQSKLA-GRGKGSKAAAGSDEEKMEYLM 442
Query: 436 ERAGMRANVAIVDLTNVSVLANKLEESFIE 465
+ R +D+ VS +A+ L+E IE
Sbjct: 443 KCLKFRGQPKFIDVNPVSQMADGLKEGLIE 472
>gi|407041314|gb|EKE40660.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 600
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 139/249 (55%), Gaps = 44/249 (17%)
Query: 168 ISTEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
+ E W +L +L +++++Y LGF PT IQ+ I A KDI+G+A TGSGKTL
Sbjct: 56 LMIEMKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHKDIVGSAPTGSGKTL 115
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 286
+F +PI+QRL+E +K + + +II PTRELA+Q+ +H K++
Sbjct: 116 SFLIPIVQRLIE---------LDKTDSTQ---------CVIIVPTRELAVQINEHFKKLI 157
Query: 287 KGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFFV 344
K + + IVGGM+ KQ RLL P +V+GTPGRL+EL S E ++++ L + F V
Sbjct: 158 KYLPQFTSLVIVGGMAIPKQVRLLSQEPTIVIGTPGRLYELYSETEHNVLQTLPEIPFIV 217
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
LDEADR++E GHF + ++D+ K++QT VFSAT+
Sbjct: 218 LDEADRLLEKGHFVDFTKLLDI-----------------------FNNKEKQTFVFSATM 254
Query: 405 ALSADFRKK 413
L+++ K
Sbjct: 255 ILASEMMAK 263
>gi|367013592|ref|XP_003681296.1| hypothetical protein TDEL_0D05010 [Torulaspora delbrueckii]
gi|359748956|emb|CCE92085.1| hypothetical protein TDEL_0D05010 [Torulaspora delbrueckii]
Length = 750
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 167/307 (54%), Gaps = 48/307 (15%)
Query: 171 EFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
EF WN+L +L ++ + +LGF +PT IQ IP A +G+DI+G A TGSGKTLA+G
Sbjct: 171 EFPEWNKLGKLSVTTLQGLTKLGFSKPTDIQAKAIPEAM-KGEDIMGKAATGSGKTLAYG 229
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 289
+PI++++L ++++ + ALI TPTRELA QVT HL+++ + I
Sbjct: 230 IPILEKMLNNKDQSKAI------------------ALIFTPTRELAQQVTKHLQQIGELI 271
Query: 290 ----NVRVVPIVGGMSTEKQERLLK--ARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 343
++ + GG+S +KQERLLK +VV TPGR EL+ E + +
Sbjct: 272 LKKSPYAIMSLTGGLSIQKQERLLKYDGSARVVVATPGRFLELIEKNESLVKRFAKIDTL 331
Query: 344 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 403
VLDEADR++++GHF E + I+ L G S + S+ +++ QT++FSAT
Sbjct: 332 VLDEADRLLQDGHFDEFEKILKYL--------GNSRK-------STDKKEGWQTMIFSAT 376
Query: 404 IALSADFRKKLKHGSL-KLKQSVNGLNSIET----LSERAGMRANVAIVDLTNVSVLANK 458
A+ D KL S K K+ + +E L + ++ I+D + ++++
Sbjct: 377 FAM--DLFNKLSTTSWSKFKKGKENASEMEIVLQHLMTKIHFKSKPVIIDTDSEQRVSSR 434
Query: 459 LEESFIE 465
++ES IE
Sbjct: 435 IKESLIE 441
>gi|71003417|ref|XP_756389.1| hypothetical protein UM00242.1 [Ustilago maydis 521]
gi|46095767|gb|EAK81000.1| hypothetical protein UM00242.1 [Ustilago maydis 521]
Length = 957
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 182/386 (47%), Gaps = 81/386 (20%)
Query: 157 DAEEELVSEAEISTEF-DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA-------- 207
D +++ EAE + AW+ L LH L +++ GFK+PT IQ+ IP A
Sbjct: 224 DLQDDEADEAEFDDKLLPAWSHLALHSDLKRALLHKGFKQPTEIQRKAIPFALGLQQEAT 283
Query: 208 ------------------AHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 249
+ +D++G ++TGSGKTLA+GLPI+ L E E A
Sbjct: 284 SSDDSEDTADSAAIGAPSTRRKRDVVGVSQTGSGKTLAYGLPILNYLFENAENAIASSCR 343
Query: 250 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG------INV------------ 291
+ + P G ALI+ PTRELALQV+ HL ++ + I+V
Sbjct: 344 RNAVDDLPPPLG---ALILCPTRELALQVSSHLIDLVRASCIVSDIDVDQPEISHRKLLR 400
Query: 292 --RVVPIVGGMSTEKQERLLKARP---------ELVVGTPGRLWELMSGGEKHLVELHTL 340
++ + GGMS +KQ RLL+ R +++V TPGRLWE+ + +
Sbjct: 401 RPQIAVVCGGMSEQKQRRLLEGRSRQGDRKAGVDIIVATPGRLWEMTRLDDHLAARIKQT 460
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR----- 395
F VLDEADRM+E GHF E++ I++++ + + + Q V+ S + +
Sbjct: 461 RFLVLDEADRMVEVGHFAEMEHILNLVNRSEAKRPSEGQDGQQHVSGSDKEDESEVEIPT 520
Query: 396 ---------QTLVFSATI--ALSADF--RKKLKHGSLKL--KQSVNGLNSIETLSERAGM 440
QT +FSAT+ AL + R+KLK + K K+ N +++ L +R
Sbjct: 521 HGVKPSSSMQTFIFSATLSKALQVNLKRRRKLKQFAKKRHSKRKENA-TTLDELMDRIDF 579
Query: 441 RANV-AIVDLTNVSVLANKLEESFIE 465
R A++DLT L L E+ IE
Sbjct: 580 RDQAPAVIDLTPAQGLPQGLMETKIE 605
>gi|150951560|ref|XP_001387897.2| ATP-dependent RNA helicase [Scheffersomyces stipitis CBS 6054]
gi|284018096|sp|A3GG51.2|MAK5_PICST RecName: Full=ATP-dependent RNA helicase MAK5
gi|149388695|gb|EAZ63874.2| ATP-dependent RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 836
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 123/216 (56%), Gaps = 12/216 (5%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEE 239
L P + + LGF +PTPIQK IP AA +GKD++G A TGSGKTLA+G+PI+++ L
Sbjct: 229 LSPYTLHGLSVLGFDKPTPIQKKTIPLAA-EGKDVVGKAITGSGKTLAYGIPILEKYLSN 287
Query: 240 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR---VVPI 296
+ ++K H +I PTRELA QV HL +AK + +V I
Sbjct: 288 LSIINQNRQKK--------IINHPTGIIFAPTRELAHQVVSHLNSLAKYSPLSTNGIVSI 339
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
GG+S +KQERLL P ++V TPGR+ EL+ E L + VLDEADR++++GH
Sbjct: 340 TGGLSIQKQERLLSHGPGIIVATPGRILELLQKDEDLTKRLASTDIIVLDEADRLLQDGH 399
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 392
F E ++I+D+ N+ + QT V ++ R
Sbjct: 400 FEEFETILDLFRKNRPKNKTFPWKWQTLVFSATFSR 435
>gi|344232121|gb|EGV64000.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 809
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 126/234 (53%), Gaps = 27/234 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+ L L + + L F PTPIQK IP +G+DIIG A TGSGKTLA+G+PI++
Sbjct: 169 WSSLSLSGYALTGLNELKFTSPTPIQKKSIPLGL-EGRDIIGKATTGSGKTLAYGIPILE 227
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR-- 292
+ L E ++ + +P G ++ PTRELA QV DHL ++K +
Sbjct: 228 KYLSNLE----TIKANRKNGIINSPTG----IVFVPTRELAHQVVDHLNNISKFYPLPPN 279
Query: 293 -VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+V I GG+S +KQERLLK P L+V TPGR EL E+ L + VLDEADR+
Sbjct: 280 GIVSITGGLSIQKQERLLKFGPGLIVATPGRFLELSEKDEELLKRWSSTDIVVLDEADRL 339
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
+++GHF E + I+++ N L K QTLVFSAT A
Sbjct: 340 LQDGHFDEFEKILELFKKHRPGN---------------LATWKWQTLVFSATFA 378
>gi|294658482|ref|XP_460822.2| DEHA2F10538p [Debaryomyces hansenii CBS767]
gi|218511820|sp|Q6BLU9.2|PRP28_DEBHA RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|202953164|emb|CAG89165.2| DEHA2F10538p [Debaryomyces hansenii CBS767]
Length = 580
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 136/241 (56%), Gaps = 19/241 (7%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYR-LGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGK 224
+I W E +L L+ + + LG+ PTPIQ+A IP A + G+DI+G AETGSGK
Sbjct: 147 GDIENPLRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALN-GRDIVGIAETGSGK 205
Query: 225 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 284
TLAF LP+ +L + +L E +E+ P G LI+ PTRELALQ+T K
Sbjct: 206 TLAFLLPLFSYILSV--DSNYLLYEHQQESNFNKPLG----LILAPTRELALQITKEAKL 259
Query: 285 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
+N+ VV I+GG E+ ++ +VV TPGRL + + E+ ++ L FF
Sbjct: 260 FGDKLNLNVVTIIGGHQYEETVHSVRNGVHIVVATPGRLIDSL---ERGIINLSNCYFFT 316
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+DEAD+MI+ G + LQSI++ LP SE+ +T + KKR TL+F+ATI
Sbjct: 317 MDEADKMIDMGFEKSLQSILNYLP--------ASEKLETTIDGKIFNIKKRITLMFTATI 368
Query: 405 A 405
+
Sbjct: 369 S 369
>gi|449705204|gb|EMD45301.1| ATP-dependent RNA helicase mak5, putative [Entamoeba histolytica
KU27]
Length = 600
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 159/297 (53%), Gaps = 53/297 (17%)
Query: 168 ISTEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
+ E W +L +L +++++Y LGF PT IQ+ I A KDI+G+A TGSGKTL
Sbjct: 56 LMIEMKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHKDIVGSAPTGSGKTL 115
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 286
+F +PI+QRL+E +K + + +II PTRELA+Q+ +H K++
Sbjct: 116 SFLIPIVQRLIE---------LDKTDSTQ---------CVIIVPTRELAVQINEHFKKLI 157
Query: 287 KGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFFV 344
K + + IVGGM+ KQ RLL P +V+GTPGR++EL S E ++++ L + F V
Sbjct: 158 KYLPQFTSLVIVGGMAIPKQVRLLSQEPTIVIGTPGRIYELYSETEHNVLQTLPEIPFIV 217
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
LDEADR++E GHF + ++D+ K++QT VFSAT+
Sbjct: 218 LDEADRLLEKGHFVDFTKLLDI-----------------------FNNKEKQTFVFSATM 254
Query: 405 ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEE 461
L+++ K K S NG + + + ++ + + ++D++ ++EE
Sbjct: 255 ILASEMMAK--------KYSSNGEDELTRMLQKLKLN-DAELIDISTPQQTVEQIEE 302
>gi|67463088|ref|XP_648201.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56464242|gb|EAL42815.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 600
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 159/297 (53%), Gaps = 53/297 (17%)
Query: 168 ISTEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
+ E W +L +L +++++Y LGF PT IQ+ I A KDI+G+A TGSGKTL
Sbjct: 56 LMIEMKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHKDIVGSAPTGSGKTL 115
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 286
+F +PI+QRL+E +K + + +II PTRELA+Q+ +H K++
Sbjct: 116 SFLIPIVQRLIE---------LDKTDSTQ---------CVIIVPTRELAVQINEHFKKLI 157
Query: 287 KGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFFV 344
K + + IVGGM+ KQ RLL P +V+GTPGR++EL S E ++++ L + F V
Sbjct: 158 KYLPQFTSLVIVGGMAIPKQVRLLSQEPTIVIGTPGRIYELYSETEHNVLQTLPEIPFIV 217
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
LDEADR++E GHF + ++D+ K++QT VFSAT+
Sbjct: 218 LDEADRLLEKGHFVDFTKLLDI-----------------------FNNKEKQTFVFSATM 254
Query: 405 ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEE 461
L+++ K K S NG + + + ++ + + ++D++ ++EE
Sbjct: 255 ILASEMMAK--------KYSSNGEDELTRMLQKLKLN-DAELIDISTPQQTVEQMEE 302
>gi|390352859|ref|XP_784112.3| PREDICTED: ATP-dependent RNA helicase DDX24-like
[Strongylocentrotus purpuratus]
Length = 934
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 121/204 (59%), Gaps = 26/204 (12%)
Query: 263 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 322
L L++TPTRELA+QV +HL AK N++V +VGGMS EKQ+R+LK RP+++VGTPGR
Sbjct: 458 LFGLVLTPTRELAVQVKNHLVAAAKKTNIKVAVVVGGMSAEKQKRVLKKRPDIIVGTPGR 517
Query: 323 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 382
LWEL GE HL L + ++DEADRM+E GH+ EL I+D+L
Sbjct: 518 LWELYQLGEPHLASLPDVKCLIIDEADRMVEKGHYAELSEILDILN-------------- 563
Query: 383 TCVTVSSLQRKKRQTLVFSATIALS--ADFRKKLKHGSLKLKQSVNGLNSIETLSERAGM 440
+S QR RQT VFSAT++L RK LK + K+ + ++++ + G+
Sbjct: 564 -----TSEQRSSRQTFVFSATLSLIHLGPLRKSLKKAYKQDKK-----DKLDSVMAKIGI 613
Query: 441 RANVAIVDLTNVSVLANKLEESFI 464
+ + +VDLT A+ L ES I
Sbjct: 614 KEDAEVVDLTKREGTASSLLESKI 637
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+G D A E++ SE +ST W+ L + ++ +S+ +GF PTPIQ CIPAA ++GK
Sbjct: 232 SGEDTAGEKISSEVSMST----WDTLSIPTVVHESLQTMGFASPTPIQAGCIPAAINEGK 287
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLE 238
DI+GAAETGSGKTLAFG+P++ R+L+
Sbjct: 288 DIVGAAETGSGKTLAFGIPLIYRILQ 313
>gi|444320517|ref|XP_004180915.1| hypothetical protein TBLA_0E03420 [Tetrapisispora blattae CBS 6284]
gi|387513958|emb|CCH61396.1| hypothetical protein TBLA_0E03420 [Tetrapisispora blattae CBS 6284]
Length = 742
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 162/312 (51%), Gaps = 49/312 (15%)
Query: 168 ISTEFDAWN----ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
I +E W +L H L +++ RLGF++PT IQK IP +G DI+G A TGSG
Sbjct: 168 IPSELPHWCNEIPDLSFHTL--ETLSRLGFQKPTEIQKKSIPIVM-KGTDILGKASTGSG 224
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
KTLA+G+PI++++L K G++ E G +I TPTRELA QV HL
Sbjct: 225 KTLAYGIPIIEKILSNL-KEGQLNETSG--------------IIFTPTRELAQQVGRHLN 269
Query: 284 EVAKGINVR---VVPIVGGMSTEKQERLL---KARPELVVGTPGRLWELMSGGEKHLVEL 337
E G + ++ I GG+S +KQER+L K +++V TPGR E++ EK+L
Sbjct: 270 EFVWGDHFNSSSIITITGGLSLQKQERILGYGKGAGQIIVSTPGRFLEIIEKDEKYLERF 329
Query: 338 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQT 397
+ VLDEADR+I++GHF E + I+ +L SN+ + + Q QT
Sbjct: 330 SKIDILVLDEADRLIQDGHFEEFERILKLL-----SNKRRELKEQGY----------WQT 374
Query: 398 LVFSATIALSADFRKKLKHGS----LKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVS 453
LV+SAT +L +KL G+ KL Q + L E+ R +VD+
Sbjct: 375 LVYSATFSLG--LFEKLDKGNKWNKKKLNQEEELDEVVNKLMEKIHFRQKPLVVDIDPFE 432
Query: 454 VLANKLEESFIE 465
+ ++ E+ IE
Sbjct: 433 QMNKQIHETLIE 444
>gi|45190633|ref|NP_984887.1| AER027Wp [Ashbya gossypii ATCC 10895]
gi|74693626|sp|Q757I6.1|MAK5_ASHGO RecName: Full=ATP-dependent RNA helicase MAK5
gi|44983612|gb|AAS52711.1| AER027Wp [Ashbya gossypii ATCC 10895]
gi|374108110|gb|AEY97017.1| FAER027Wp [Ashbya gossypii FDAG1]
Length = 752
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 163/318 (51%), Gaps = 55/318 (17%)
Query: 163 VSEAEISTEFDAW-NELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETG 221
+ EAE + E +W N ++L +++ + RLGF PT IQ IP A G DI+G A TG
Sbjct: 170 LDEAE-APELPSWTNTMKLSATVLQGLSRLGFSNPTEIQLQSIPKAL-DGHDIMGKASTG 227
Query: 222 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 281
SGKTLA+G+PI++ ++ + + P G LI TPTRELA QVTDH
Sbjct: 228 SGKTLAYGIPILEGIIRDDTDS--------------RPIG----LIFTPTRELAHQVTDH 269
Query: 282 LKEVAKGINVR----VVPIVGGMSTEKQERLLKAR--PELVVGTPGRLWELMSGGEKHLV 335
L+EV + R ++ + GG+S +KQERLLK + +VV TPGR EL+ + +
Sbjct: 270 LREVGALLVKRNPYSIMCLTGGLSIQKQERLLKYKGSARVVVATPGRFLELLEKDQTLID 329
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLP----MTNGSNEGQSEQTQTCVTVSSLQ 391
+ VLDEADR++++GHF E + I+ L TNG G
Sbjct: 330 RFAKVDTLVLDEADRLLQDGHFEEFERILKHLSRARKFTNGKKHGW-------------- 375
Query: 392 RKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIE----TLSERAGMRANVAIV 447
+T+++SAT +L D+ KL + S K + N +E L + R I+
Sbjct: 376 ----KTMIYSATFSL--DYFNKLSNTSWKKMKKAPSENEMEEVLKHLMTKIPFRGKPLII 429
Query: 448 DLTNVSVLANKLEESFIE 465
D +A++++ES IE
Sbjct: 430 DTNPEQKVASQIKESLIE 447
>gi|400598353|gb|EJP66070.1| ATP-dependent RNA helicase MAK5 [Beauveria bassiana ARSEF 2860]
Length = 799
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 157/302 (51%), Gaps = 19/302 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W L L P + +I +LGF PT IQ+ IP G D+IG A+TGSGKTLAFG+PI++
Sbjct: 191 WVALNLSPATVSAIGKLGFASPTEIQEQTIPHITG-GADVIGKAQTGSGKTLAFGIPIVE 249
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
R LE + + E + E ++ KG + A+I++PTRELA Q+ DH+K + G+
Sbjct: 250 RWLELHQSTDEEDEAEAEAKKER--KGPI-AVILSPTRELAKQIGDHIKALCDGLPTAAA 306
Query: 295 PIV----GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
P V GG+S +KQ+R L A+ ++V+GTPGRLWE++ G K E + F V+DEADR
Sbjct: 307 PYVCVVTGGLSIQKQQRQL-AKADIVIGTPGRLWEVLDGNMKLQDEFCRIQFLVVDEADR 365
Query: 351 MIENGHFRELQSIIDML----PMTNGSNEGQSEQTQTCVTVSSLQR-KKRQTLVFSATI- 404
+ + G F+E + II L P + + ++ + + RQTLVFSAT
Sbjct: 366 LFKAGQFKEAELIIGALDRRDPEAEDDSSDDEDFSEEEDEDADARHPPPRQTLVFSATFD 425
Query: 405 -ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESF 463
L K + + Q + L + R +D V +A L E
Sbjct: 426 KGLQTKLAGKTRPSA---SQGATDEEKMAYLMQCLKFRGQPKFIDANPVEQMAEGLREGL 482
Query: 464 IE 465
IE
Sbjct: 483 IE 484
>gi|169618601|ref|XP_001802714.1| hypothetical protein SNOG_12492 [Phaeosphaeria nodorum SN15]
gi|118574276|sp|Q0U6X2.1|MAK5_PHANO RecName: Full=ATP-dependent RNA helicase MAK5
gi|111059185|gb|EAT80305.1| hypothetical protein SNOG_12492 [Phaeosphaeria nodorum SN15]
Length = 817
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 186/364 (51%), Gaps = 36/364 (9%)
Query: 113 DGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKT-----VEESVTVSNGPDDAEEELVSEAE 167
DG+G + ++ N + + +KK+ KK K E T G D + +
Sbjct: 184 DGDGEAEPKKMNKRERAAEKKRIAALAKKTKKPDDDEASEGKTFGPGAFDILANRADDED 243
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
+ AW EL L +++S+ +L F +PT IQ + IP G+D+IG A TGSGKTLA
Sbjct: 244 DEVDVSAWEELELSTKILESLAKLKFSKPTTIQASTIPEIM-AGRDVIGKASTGSGKTLA 302
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV-A 286
FG+PI++ L + K+ ++ + P ALII PTRELA Q+T HL + A
Sbjct: 303 FGIPIIESYLASKSKS--------KDVKDKTP----LALIIAPTRELAHQITAHLTALCA 350
Query: 287 KGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
KG + + GG++ +KQ R L+ + +++VGTPGRLWE++S G L ++ + F V
Sbjct: 351 KGAFEAPLIASVTGGLAVQKQRRQLE-KADIIVGTPGRLWEVISTGHGLLEKVKQIRFLV 409
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+DEADR++ G+++EL I+ +L + + +RQTLVFSAT
Sbjct: 410 VDEADRLLSQGNYKELGEILKILE--------KDAPAEGEAEAEETTEVERQTLVFSATF 461
Query: 405 --ALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLTNVSVLANKLEE 461
L K K GS L ++ S+E L ++ R +D S +A+KL+E
Sbjct: 462 QKGLQQKLAGKAKGGSDNL---MSKQQSMEYLLKKINFREEKPKFIDANPSSQMASKLKE 518
Query: 462 SFIE 465
IE
Sbjct: 519 GLIE 522
>gi|168010159|ref|XP_001757772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691048|gb|EDQ77412.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 753
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 131/232 (56%), Gaps = 48/232 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L L+++ LG++EPTPIQ ACIP A G+DI G+A TGSGKT AF LP+++
Sbjct: 130 FGELNLSRPLIRACETLGYREPTPIQAACIPLAL-TGRDICGSAVTGSGKTGAFALPMLE 188
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKEVAKGINVR 292
RLL Y P+ +R LI+TPTRELA+QV ++++A+ +V
Sbjct: 189 RLL-------------------YRPRRIPAIRCLILTPTRELAVQVHSMVQKLAQFTDVT 229
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+VGG+S++ QE L+ARP++VV TPGR+ + + V L LS VLDEADR++
Sbjct: 230 SAIVVGGLSSKVQEVALRARPDIVVATPGRMLDHLQNSLS--VGLEDLSILVLDEADRLL 287
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
E G +E+ ++ P K+RQT++FSAT+
Sbjct: 288 ELGFTQEVHELVRQCP------------------------KRRQTMLFSATM 315
>gi|255538978|ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223551255|gb|EEF52741.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 783
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 142/261 (54%), Gaps = 48/261 (18%)
Query: 146 EESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIP 205
EE V++ D+ + S S +++ E+ L L+++ LG+ +PTPIQ ACIP
Sbjct: 120 EEDEDVAHNADETKSFFASAEGASFHANSFMEINLSRPLLRACEVLGYTKPTPIQAACIP 179
Query: 206 AAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHL 263
A G+DI G+A TGSGKT AF LP ++RLL + PK +
Sbjct: 180 LAL-TGRDICGSAITGSGKTAAFALPTLERLL-------------------FRPKRVQAI 219
Query: 264 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 323
R LI+TPTRELA+QV ++++A+ ++R IVGG+ST+ QE L++ P++VV TPGR+
Sbjct: 220 RVLILTPTRELAVQVHSMVEKLAQFTDIRCCLIVGGLSTKVQESALRSMPDIVVATPGRM 279
Query: 324 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQT 383
+ + V+L L+ +LDEADR++E G E+ ++ + P
Sbjct: 280 IDHLRNTMS--VDLDDLAVLILDEADRLLELGFSAEIHELVRLCP--------------- 322
Query: 384 CVTVSSLQRKKRQTLVFSATI 404
K+RQT++FSAT+
Sbjct: 323 ---------KRRQTMLFSATM 334
>gi|50418781|ref|XP_457911.1| DEHA2C05170p [Debaryomyces hansenii CBS767]
gi|74659437|sp|Q6BV58.1|MAK5_DEBHA RecName: Full=ATP-dependent RNA helicase MAK5
gi|49653577|emb|CAG85962.1| DEHA2C05170p [Debaryomyces hansenii CBS767]
Length = 790
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 128/234 (54%), Gaps = 27/234 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W++L L + + L +++PT IQK IP A +GKD+IG A TGSGKTLA+G+PI++
Sbjct: 201 WDDLSLSSFTLNGLSALEYEKPTAIQKRTIPLAI-EGKDVIGKAITGSGKTLAYGIPILE 259
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR-- 292
R L++ KA + + P G +I PTRELA QV DHL +AK +
Sbjct: 260 RHLQKMAKANQ------SKKVINPPTG----IIFAPTRELAHQVVDHLNRIAKFTPLSQH 309
Query: 293 -VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+V I GG+S +KQERLL P +VV TPGR EL+ + L VLDEADR+
Sbjct: 310 GIVSITGGLSIQKQERLLSHGPGIVVATPGRFLELLQKDMALVQRLSCTDIVVLDEADRL 369
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
+++GHF E I+++ + + E K QTLVFSAT +
Sbjct: 370 LQDGHFDEFVKILELFGKHRPRDNKELEW-------------KWQTLVFSATFS 410
>gi|224083077|ref|XP_002306942.1| predicted protein [Populus trichocarpa]
gi|222856391|gb|EEE93938.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 135/244 (55%), Gaps = 48/244 (19%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPI 232
+++ EL L L+++ LG+ +PTPIQ ACIP A G+DI G+A TGSGKT AF LP
Sbjct: 136 NSFMELNLSRPLLRACEALGYTKPTPIQAACIPLAL-TGRDICGSAITGSGKTAAFALPT 194
Query: 233 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKEVAKGIN 290
++RLL + PK L R LI+TPTRELA+QV ++++A+ +
Sbjct: 195 LERLL-------------------FRPKRILAIRVLILTPTRELAVQVHSMIEKIAQFTD 235
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+R +VGG+ST+ QE L++ P++VV TPGR+ + + V+L L+ +LDEADR
Sbjct: 236 IRCCLVVGGLSTKVQEASLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLILDEADR 293
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
++E G E+ ++ + P K+RQT++FSAT+ D
Sbjct: 294 LLELGFNAEIHELVRLCP------------------------KRRQTMLFSATMTEEVDM 329
Query: 411 RKKL 414
KL
Sbjct: 330 LIKL 333
>gi|143454043|sp|Q0INC5.2|RH28_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|77555691|gb|ABA98487.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|125579336|gb|EAZ20482.1| hypothetical protein OsJ_36091 [Oryza sativa Japonica Group]
gi|215706455|dbj|BAG93311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 802
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 139/254 (54%), Gaps = 48/254 (18%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+G D + S S +++ EL L L+++ LG+++PTPIQ ACIP A G+
Sbjct: 174 SGVVDPSKFFASSEGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLAL-TGR 232
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITP 270
DI G+A TGSGKT AF LP+++RLL + PK +R LI+TP
Sbjct: 233 DICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILTP 273
Query: 271 TRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 330
TRELA QV ++++A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + +
Sbjct: 274 TRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNS 333
Query: 331 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 390
V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 334 LS--VGLEDLAILILDEADRLLELGFSAEIQELIRMCP---------------------- 369
Query: 391 QRKKRQTLVFSATI 404
++RQT++FSAT+
Sbjct: 370 --RRRQTMLFSATM 381
>gi|115488568|ref|NP_001066771.1| Os12g0481100 [Oryza sativa Japonica Group]
gi|113649278|dbj|BAF29790.1| Os12g0481100, partial [Oryza sativa Japonica Group]
Length = 832
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 139/254 (54%), Gaps = 48/254 (18%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+G D + S S +++ EL L L+++ LG+++PTPIQ ACIP A G+
Sbjct: 204 SGVVDPSKFFASSEGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLAL-TGR 262
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITP 270
DI G+A TGSGKT AF LP+++RLL + PK +R LI+TP
Sbjct: 263 DICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILTP 303
Query: 271 TRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 330
TRELA QV ++++A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + +
Sbjct: 304 TRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNS 363
Query: 331 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 390
V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 364 LS--VGLEDLAILILDEADRLLELGFSAEIQELIRMCP---------------------- 399
Query: 391 QRKKRQTLVFSATI 404
++RQT++FSAT+
Sbjct: 400 --RRRQTMLFSATM 411
>gi|239624536|ref|ZP_04667567.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47_FAA]
gi|239520922|gb|EEQ60788.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47FAA]
Length = 518
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 146/252 (57%), Gaps = 51/252 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL+L PLL+K++ + G+ +P+PIQ+ IP + G+D++G A+TG+GKT AF LPI+Q
Sbjct: 3 FDELQLSPLLLKALDQKGYIKPSPIQEQAIPYVLN-GQDLLGCAQTGTGKTAAFALPIIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L+E + K K +RALI+TPTRELALQ+ ++++E G +
Sbjct: 62 NLMERPKNRQK--------------KKPVRALILTPTRELALQIHENIEEYGAGTPINSA 107
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S + Q + L+ +++V TPGRL +L+ +H ++L + FVLDEADRM++
Sbjct: 108 VIFGGVSAKPQIQSLRRGIDILVATPGRLLDLIG---QHEIDLSFVEIFVLDEADRMLDM 164
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G +++ +I +LP KKRQTL+FSAT+ AL+A
Sbjct: 165 GFIHDVKRVITLLP------------------------KKRQTLLFSATMPDEIQALAA- 199
Query: 410 FRKKLKHGSLKL 421
KL H +K+
Sbjct: 200 ---KLLHNPVKV 208
>gi|401841362|gb|EJT43764.1| MAK5-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 435
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 213/444 (47%), Gaps = 79/444 (17%)
Query: 61 GGFLSLEEIDEASYNLQ------IPKPEK--GKPGKKTNTKKRKRSSANEEDPGDG---- 108
GGF LEEID + IPK + + K +K +++ + E PG G
Sbjct: 23 GGFYGLEEIDGVDVKIVNGKVNFIPKNDSKLARDVTKEKSKNKEKRAGAEASPGSGLESE 82
Query: 109 -----DGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELV 163
+ D+ G +L ++ G++ + K G + +G +D +E+++
Sbjct: 83 LLEFKNLDDVEEGELSAASYSLSDE-GEQDENKDTG-----------LLDGNEDEDEDVL 130
Query: 164 SEA---------EIS-TEFDAWNELR-LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
E +IS + W L L +++S+ L F PT IQK IPA +GK
Sbjct: 131 KENVFNQNINIDDISPVDLPEWTNLSSLSMTILQSLQNLNFLRPTEIQKKSIPAIL-EGK 189
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 272
D++G A TGSGKTLA+G+PI+++L+ + K P +LI TPTR
Sbjct: 190 DVLGKASTGSGKTLAYGIPIVEQLITNFSQKNK------------KP----ISLIFTPTR 233
Query: 273 ELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLKARP--ELVVGTPGRLWEL 326
ELA QVTDHL+++ + + ++ + GG+S +KQ+RLLK ++V+ TPGR EL
Sbjct: 234 ELAHQVTDHLRKICEPVLAKSQYSILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLEL 293
Query: 327 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT 386
+ + + ++ +LDEADR++++GHF E + II L + E+ + V
Sbjct: 294 LEKDNELIKRFSQVNTLILDEADRLLQDGHFDEFEKIIKYLSV---------ERRKNKVK 344
Query: 387 VSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQSVNGLNS-IETLSERAGMR 441
S K QTLVFSAT S D KL K K + + LN+ IE L +
Sbjct: 345 DSENDNKIWQTLVFSAT--FSIDLFDKLSSSHQAKDRKFKNNEDELNAVIEHLMNKIQFN 402
Query: 442 ANVAIVDLTNVSVLANKLEESFIE 465
+ I+ S + + ++ES IE
Sbjct: 403 SKPVIIHTNPGSKVGSHIKESLIE 426
>gi|302817632|ref|XP_002990491.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
gi|300141659|gb|EFJ08368.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
Length = 469
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 147/302 (48%), Gaps = 61/302 (20%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA---------WNELRLHPLLMKSIYRLGFKEPT 197
+ V + PDD EI E DA + EL + L+ + LG + PT
Sbjct: 21 DPVPAAERPDDGNAR---STEICKESDAPEGGGGGGSFEELGVAEWLVGACKELGMRHPT 77
Query: 198 PIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKY 257
P+Q+AC+P +GKD++G A+TGSGKT AF LPI+QRL E
Sbjct: 78 PVQRACVPQIL-KGKDVLGMAQTGSGKTAAFALPILQRLGEN------------------ 118
Query: 258 APKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVV 317
P G + AL++TPTRELA Q++D K + G+++R +VGGM Q ++L RP +V+
Sbjct: 119 -PYG-IFALVMTPTRELAFQISDQFKALGAGVHLRCAVVVGGMDMTTQAQILMERPHVVI 176
Query: 318 GTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQ 377
TPGR+ + F VLDEAD +++ G ELQ+I D +
Sbjct: 177 ATPGRIKAHIGSDPDIAAAFSKTKFLVLDEADLLLDRGFQDELQTIFDGI---------- 226
Query: 378 SEQTQTCVTVSSLQRKKRQTLVFSATIA--LSADFRKKLKHGSLKLKQSVNGLNSIETLS 435
K+RQTL+FSAT+ L A R H + Q+ GL ++E+L
Sbjct: 227 --------------SKQRQTLLFSATMTGDLQA-LRDLFGHRAF-FYQAYEGLKTVESLD 270
Query: 436 ER 437
+R
Sbjct: 271 QR 272
>gi|190408703|gb|EDV11968.1| ATP-dependent RNA helicase MAK5 [Saccharomyces cerevisiae RM11-1a]
Length = 769
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 173/341 (50%), Gaps = 51/341 (14%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA----------WNELR-LHPLLMKSIYRLGFKE 195
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 196 PTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAE 255
PT IQK IP QG D++G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSRKNK---------- 238
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLKA 311
P +LI TPTRELA QVTDHLK++ + + ++ + GG+S +KQ+RLLK
Sbjct: 239 --KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKY 292
Query: 312 RP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L +
Sbjct: 293 DNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLLV 352
Query: 370 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQSV 425
N SE + K QTL+FSAT S D KL + K +
Sbjct: 353 ERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSSRQVKDRRFKNNE 400
Query: 426 NGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
+ LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 401 DELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 441
>gi|207347639|gb|EDZ73745.1| YBR142Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|290878158|emb|CBK39217.1| Mak5p [Saccharomyces cerevisiae EC1118]
Length = 769
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 173/341 (50%), Gaps = 51/341 (14%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA----------WNELR-LHPLLMKSIYRLGFKE 195
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 196 PTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAE 255
PT IQK IP QG D++G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSRKNK---------- 238
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLKA 311
P +LI TPTRELA QVTDHLK++ + + ++ + GG+S +KQ+RLLK
Sbjct: 239 --KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKY 292
Query: 312 RP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L +
Sbjct: 293 DNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLLV 352
Query: 370 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQSV 425
N SE + K QTL+FSAT S D KL + K +
Sbjct: 353 ERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSSRQVKDRRFKNNE 400
Query: 426 NGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
+ LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 401 DELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 441
>gi|427785455|gb|JAA58179.1| Putative atp-dependent rna helicase ddx23 [Rhipicephalus
pulchellus]
Length = 788
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 143/231 (61%), Gaps = 16/231 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+E L ++ I LG+K+PTPIQ+ IP Q +DIIG AETGSGKTLAF LP++
Sbjct: 362 WSECNLPTAILDVIKELGYKDPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLAFLLPLLV 420
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K+ E+ E+A++ P A+I+ PTRELA Q+ + + AK +++R V
Sbjct: 421 WITS----LPKI--ERQEDADQ-GPY----AIIMAPTRELAQQIDEETTKFAKMLDIRSV 469
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG+S E+Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 470 AVIGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LSRCTYIVLDEADRMIDM 526
Query: 355 GHFRELQSIIDMLPMTNGS-NEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E+Q I+D +P+TN + +E + + + + K RQT++F+AT+
Sbjct: 527 GFEGEVQKILDYMPVTNQKPDTDDAEDEEKLLANFASKHKYRQTVMFTATM 577
>gi|309792104|ref|ZP_07686577.1| DEAD/DEAH box helicase domain protein [Oscillochloris trichoides
DG-6]
gi|308225848|gb|EFO79603.1| DEAD/DEAH box helicase domain protein [Oscillochloris trichoides
DG6]
Length = 422
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 124/230 (53%), Gaps = 47/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + LHP LM+++ GF +PTPIQ IP A G+++IG A+TG+GKT AF LPI+Q
Sbjct: 3 FADFALHPALMQNVSAQGFTQPTPIQAQTIPLAL-SGQNLIGLAQTGTGKTAAFVLPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RLL+ R++ + ALI+TPTRELA Q+ D ++ +A G +R
Sbjct: 62 RLLQNRQRGTQ-------------------ALIVTPTRELAEQINDTIRVLAHGTGLRSA 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG+ E QER L+A E+VV PGRL + + G L + VLDEADRM++
Sbjct: 103 PIYGGVGMEPQERALRAGVEIVVACPGRLIDHLGRGS---ARLDGVQMLVLDEADRMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +Q I+ LP +RQT++FSAT+
Sbjct: 160 GFLPAIQRILSALP------------------------TRRQTMLFSATL 185
>gi|50557160|ref|XP_505988.1| YALI0F28391p [Yarrowia lipolytica]
gi|74659615|sp|Q6C024.1|PRP28_YARLI RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|49651858|emb|CAG78800.1| YALI0F28391p [Yarrowia lipolytica CLIB122]
Length = 575
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 145/241 (60%), Gaps = 21/241 (8%)
Query: 168 ISTEFDAWNELRLHPLLMK-SIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
I +WNE + P +++ +I R+G+KEPTPIQ+A IP A +D+IG AETGSGKT
Sbjct: 157 IPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGI-RDVIGVAETGSGKTA 215
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 286
+F +P++ + E L + E ++ P G LI+ PTRELA+Q+ D +
Sbjct: 216 SFLIPLISYICE--------LPKLDERSKVNGPYG----LILAPTRELAMQIKDEAVKFC 263
Query: 287 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
+ +VV +VGG S ++Q ++ EL+V TPGRL +++ ++ L+ L+ + V+D
Sbjct: 264 APLGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDVI---DRRLLVLNQCCYVVMD 320
Query: 347 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 406
EADRM++ G ++Q ++ LP +N + S++ + VS+ R+ RQT++++AT+ +
Sbjct: 321 EADRMVDMGFEEQVQKVLASLPSSNAKPD--SDEAENLAAVST--RRYRQTMMYTATMPV 376
Query: 407 S 407
+
Sbjct: 377 A 377
>gi|160409988|sp|A6ZL85.1|MAK5_YEAS7 RecName: Full=ATP-dependent RNA helicase MAK5; AltName:
Full=Maintenance of killer protein 5
gi|151946532|gb|EDN64754.1| maintenance of killer [Saccharomyces cerevisiae YJM789]
Length = 769
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 173/341 (50%), Gaps = 51/341 (14%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA----------WNELR-LHPLLMKSIYRLGFKE 195
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 196 PTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAE 255
PT IQK IP QG D++G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSQKNK---------- 238
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLKA 311
P +LI TPTRELA QVTDHLK++ + + ++ + GG+S +KQ+RLLK
Sbjct: 239 --KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKY 292
Query: 312 RP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L +
Sbjct: 293 DNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLLV 352
Query: 370 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQSV 425
N SE + K QTL+FSAT S D KL + K +
Sbjct: 353 ERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSSRQVKDRRFKNNE 400
Query: 426 NGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
+ LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 401 DELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 441
>gi|256268948|gb|EEU04293.1| Mak5p [Saccharomyces cerevisiae JAY291]
Length = 769
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 173/341 (50%), Gaps = 51/341 (14%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA----------WNELR-LHPLLMKSIYRLGFKE 195
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 196 PTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAE 255
PT IQK IP QG D++G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSQKNK---------- 238
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLKA 311
P +LI TPTRELA QVTDHLK++ + + ++ + GG+S +KQ+RLLK
Sbjct: 239 --KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKY 292
Query: 312 RP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L +
Sbjct: 293 DNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLLV 352
Query: 370 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQSV 425
N SE + K QTL+FSAT S D KL + K +
Sbjct: 353 ERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSSRQVKDRRFKNNE 400
Query: 426 NGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
+ LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 401 DELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 441
>gi|323334595|gb|EGA75969.1| Mak5p [Saccharomyces cerevisiae AWRI796]
Length = 700
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 173/341 (50%), Gaps = 51/341 (14%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA----------WNELR-LHPLLMKSIYRLGFKE 195
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 196 PTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAE 255
PT IQK IP QG D++G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSRKNK---------- 238
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLKA 311
P +LI TPTRELA QVTDHLK++ + + ++ + GG+S +KQ+RLLK
Sbjct: 239 --KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKY 292
Query: 312 RP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L +
Sbjct: 293 DNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLLV 352
Query: 370 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQSV 425
N SE + K QTL+FSAT S D KL + K +
Sbjct: 353 ERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSSRQVKDRRFKNNE 400
Query: 426 NGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
+ LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 401 DELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 441
>gi|340514381|gb|EGR44644.1| predicted protein [Trichoderma reesei QM6a]
Length = 734
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 156/295 (52%), Gaps = 30/295 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W EL L ++ +I +LGF +PT IQ+ IP G+D+IG A+TGSGKTLAFG+PI++
Sbjct: 172 WVELNLSTRVVSAIAKLGFSKPTLIQQKTIPEIL-AGEDVIGKAQTGSGKTLAFGIPIVE 230
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV--R 292
+ LE L A++ P A++++PTRELA Q++DH+K + G+
Sbjct: 231 KWLE--------LYVDKANAKREGPT----AVVLSPTRELAKQLSDHIKALCDGLPTAPY 278
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
V + GG+S +KQ+R L+ + ++V+ TPGRLWE++ G + F V+DEADR+
Sbjct: 279 VCTVTGGLSIQKQQRQLE-KADIVIATPGRLWEVLDGDMSLQDSFTKIKFLVVDEADRLF 337
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRK 412
+ G F+E + II L + RQTLVFSAT + +
Sbjct: 338 KAGQFKEAEDIIGAL---------DRRDPEADEDDEGDDLPPRQTLVFSAT--FDKNLQS 386
Query: 413 KLKHGSLKLKQSVNGLN--SIETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
KL G K ++ G + +E L + R +D+ VS +A L+E IE
Sbjct: 387 KLA-GRGKGPKAAAGSDEEKMEYLMKCLKFRGEPKYIDVNPVSQMAEGLKEGLIE 440
>gi|66911843|gb|AAH96826.1| DDX24 protein [Homo sapiens]
Length = 804
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 307 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 365
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 366 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 425
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 426 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 466
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 467 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 513
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 206 AAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLE 238
AA DI+GAAETGSGKTLAF +P++ +L+
Sbjct: 170 AAIRDKLDILGAAETGSGKTLAFAIPMIHAVLQ 202
>gi|426377845|ref|XP_004055664.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Gorilla gorilla
gorilla]
Length = 859
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 362 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 420
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 421 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 480
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 481 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 521
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 522 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 250 PMIHAVLQ 257
>gi|9966805|ref|NP_065147.1| ATP-dependent RNA helicase DDX24 [Homo sapiens]
gi|18202929|sp|Q9GZR7.1|DDX24_HUMAN RecName: Full=ATP-dependent RNA helicase DDX24; AltName: Full=DEAD
box protein 24
gi|9931361|gb|AAG02169.1|AF214731_1 ATP-dependent RNA helicase [Homo sapiens]
gi|10437623|dbj|BAB15079.1| unnamed protein product [Homo sapiens]
gi|12053271|emb|CAB66820.1| hypothetical protein [Homo sapiens]
gi|14250756|gb|AAH08847.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Homo sapiens]
gi|14424802|gb|AAH09406.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Homo sapiens]
gi|117645896|emb|CAL38415.1| hypothetical protein [synthetic construct]
gi|119601957|gb|EAW81551.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_b [Homo
sapiens]
gi|123993695|gb|ABM84449.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [synthetic construct]
gi|124000001|gb|ABM87509.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [synthetic construct]
gi|208967745|dbj|BAG72518.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [synthetic construct]
Length = 859
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 362 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 420
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 421 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 480
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 481 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 521
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 522 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 250 PMIHAVLQ 257
>gi|315641802|ref|ZP_07896806.1| ATP-dependent RNA helicase DeaD [Enterococcus italicus DSM 15952]
gi|315482477|gb|EFU73016.1| ATP-dependent RNA helicase DeaD [Enterococcus italicus DSM 15952]
Length = 522
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 137/259 (52%), Gaps = 53/259 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+K++ R GF+E TPIQ IP A G+D+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKAVERSGFEEATPIQSETIPLAL-SGRDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ HL+ L+I+PTRELA+Q + L + K VRV+
Sbjct: 62 KI--------------------DTSSSHLQGLVISPTRELAIQTQEELYRLGKDKKVRVM 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHIN---RHTLKLETVETLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G +++SII +P T RQTL+FSAT+ ++
Sbjct: 159 GFLEDIESIISKVPST------------------------RQTLLFSATMPPAIKSIGVK 194
Query: 410 FRKKLKHGSLKLKQSVNGL 428
F + +H +K K+ L
Sbjct: 195 FMQNPEHVKIKAKEMTADL 213
>gi|197101980|ref|NP_001125038.1| ATP-dependent RNA helicase DDX24 [Pongo abelii]
gi|75061972|sp|Q5RDL2.1|DDX24_PONAB RecName: Full=ATP-dependent RNA helicase DDX24; AltName: Full=DEAD
box protein 24
gi|55726767|emb|CAH90145.1| hypothetical protein [Pongo abelii]
Length = 859
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 362 DKEQTGNLKQELDDKSATCKTY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 420
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 421 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 480
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 481 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 521
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 522 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQVLTLAPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 250 PMIHAVLQ 257
>gi|149642575|ref|NP_001092515.1| ATP-dependent RNA helicase DDX24 [Bos taurus]
gi|148878167|gb|AAI46185.1| DDX24 protein [Bos taurus]
gi|296475209|tpg|DAA17324.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Bos taurus]
Length = 852
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 124/226 (54%), Gaps = 23/226 (10%)
Query: 239 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 298
+ E+AGK+ +E G PK L L++TPTRELA+QV H+ VAK +++ +VG
Sbjct: 361 DEEQAGKLKQELG--GSTVPPKRPLLGLVLTPTRELAVQVKQHVDAVAKFTSIKTAILVG 418
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
GMST+KQ+R+L +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 419 GMSTQKQQRMLNRQPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 478
Query: 359 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 418
EL +++ML S KRQTLVFSAT+ L ++ H
Sbjct: 479 ELSQLLEML-------------------SDSQYNPKRQTLVFSATLTLVHQAPARILHK- 518
Query: 419 LKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 519 -KHAKKMDKTAKLDLLMQKIGMRGKPKVIDLTRKEATVETLTETKI 563
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 231 PIMQRLL 237
P++ +L
Sbjct: 249 PMIDAVL 255
>gi|118372814|ref|XP_001019601.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89301368|gb|EAR99356.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 1093
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 122/195 (62%), Gaps = 10/195 (5%)
Query: 175 WNELRL-HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
W++ L HP +++S+ F PT IQ A + D + A++TGSGKTL+FG+PI+
Sbjct: 9 WSKWDLIHPQVLQSLKDNNFNNPTEIQ-AYVLNTYRNYNDFLIASQTGSGKTLSFGIPIV 67
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI--NV 291
+L ++ A ++ ++ EKY +R LII PTREL LQ+ HL ++++ +
Sbjct: 68 SEILYDKSGAFAEKKKDQKKKEKY-----IRCLIIAPTRELVLQIEKHLNQISQNSKDQI 122
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFFVLDEADR 350
R+ IVGG+S EKQ R+L P++++ TPGRLW+++ E +E L+ L + VLDEADR
Sbjct: 123 RIGSIVGGISKEKQRRILSYVPDILIATPGRLWDMIDNYEHECLEKLYMLDYLVLDEADR 182
Query: 351 MIENGHFRELQSIID 365
M+E GHF EL I++
Sbjct: 183 MVELGHFDELDKILE 197
>gi|402877046|ref|XP_003902254.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Papio anubis]
Length = 856
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 360 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 418
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 419 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 478
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 479 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 519
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 520 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 566
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAI 247
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 248 PVIHAVLQ 255
>gi|62088344|dbj|BAD92619.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 variant [Homo sapiens]
Length = 676
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 368 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 426
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 427 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 486
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 487 HFAELSQLLEML------NDSQ-------------YNPKRQTLVFSATLTLVHQAPARIL 527
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 528 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 574
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 196 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 255
Query: 231 PIMQRLLEEREK 242
P++ +L+ +++
Sbjct: 256 PMIHAVLQWQKR 267
>gi|6319618|ref|NP_009700.1| Mak5p [Saccharomyces cerevisiae S288c]
gi|586550|sp|P38112.1|MAK5_YEAST RecName: Full=ATP-dependent RNA helicase MAK5; AltName:
Full=Maintenance of killer protein 5
gi|536442|emb|CAA85100.1| MAK5 [Saccharomyces cerevisiae]
gi|547578|emb|CAA55539.1| YBR1119 [Saccharomyces cerevisiae]
gi|285810473|tpg|DAA07258.1| TPA: Mak5p [Saccharomyces cerevisiae S288c]
gi|392300984|gb|EIW12073.1| Mak5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 773
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 158/303 (52%), Gaps = 41/303 (13%)
Query: 175 WNELR-LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
W L L +++S+ L F PT IQK IP QG D++G A TGSGKTLA+G+PI+
Sbjct: 172 WTNLAPLSMTILQSLQNLNFLRPTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIV 230
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI---- 289
++L+ + K P +LI TPTRELA QVTDHLK++ + +
Sbjct: 231 EKLISNFSQKNK------------KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKS 274
Query: 290 NVRVVPIVGGMSTEKQERLLKARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
++ + GG+S +KQ+RLLK ++V+ TPGR EL+ + ++ +LDE
Sbjct: 275 QYSILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVNTLILDE 334
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADR++++GHF E + II L + N SE + K QTL+FSAT S
Sbjct: 335 ADRLLQDGHFDEFEKIIKHLLVERRKNRENSEGSS----------KIWQTLIFSAT--FS 382
Query: 408 ADFRKKLKHG----SLKLKQSVNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEES 462
D KL + K + + LN+ I+ L + + I+D S ++++++ES
Sbjct: 383 IDLFDKLSSSRQVKDRRFKNNEDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKES 442
Query: 463 FIE 465
IE
Sbjct: 443 LIE 445
>gi|194386302|dbj|BAG59715.1| unnamed protein product [Homo sapiens]
Length = 763
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 319 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 377
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 378 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 437
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 438 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 478
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 479 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 525
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 147 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 206
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 207 PMIHAVLQ 214
>gi|119601958|gb|EAW81552.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_c [Homo
sapiens]
Length = 840
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 362 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 420
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 421 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 480
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 481 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 521
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 522 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 250 PMIHAVLQ 257
>gi|365766859|gb|EHN08348.1| Mak5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 769
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 172/341 (50%), Gaps = 51/341 (14%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTEFDA----------WNELR-LHPLLMKSIYRLGFKE 195
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 196 PTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAE 255
PT IQK IP QG D++G A TGSGKTLA+G+PI+++L+ K
Sbjct: 190 PTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSXKNK---------- 238
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLKA 311
P +LI TPTRELA QVTDHLK++ + + ++ + GG+S +KQ+RLLK
Sbjct: 239 --KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKY 292
Query: 312 RP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L +
Sbjct: 293 DNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLLV 352
Query: 370 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKLKQSV 425
N SE + K QTL+FSAT S D KL + K +
Sbjct: 353 ERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSSRQVKDRRFKNNE 400
Query: 426 NGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
+ LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 401 DELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 441
>gi|194383912|dbj|BAG59314.1| unnamed protein product [Homo sapiens]
Length = 766
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 269 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 327
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 328 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 387
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 388 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 428
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 429 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 475
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLE 238
DI+GAAETGSGKTLAF +P++ +L+
Sbjct: 139 DILGAAETGSGKTLAFAIPMIHAVLQ 164
>gi|349576517|dbj|GAA21688.1| K7_Mak5p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 773
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 157/303 (51%), Gaps = 41/303 (13%)
Query: 175 WNELR-LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
W L L +++S+ L F PT IQK IP QG D++G A TGSGKTLA+G+PI+
Sbjct: 172 WTNLAPLSMTILQSLQNLNFLRPTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIV 230
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI---- 289
++L+ + K P +LI TPTRELA QVTDHLK++ + +
Sbjct: 231 EKLISNFSQKNK------------KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKS 274
Query: 290 NVRVVPIVGGMSTEKQERLLKARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
++ + GG+S +KQ+RLLK ++V+ TPGR EL+ + + +LDE
Sbjct: 275 QYSILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDE 334
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADR++++GHF E + II L + N SE + K QTL+FSAT S
Sbjct: 335 ADRLLQDGHFDEFEKIIKHLLVERRKNRENSEGSS----------KIWQTLIFSAT--FS 382
Query: 408 ADFRKKLKHG----SLKLKQSVNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEES 462
D KL + K + + LN+ I+ L + + I+D S ++++++ES
Sbjct: 383 IDLFDKLSSSRQVKDRRFKNNEDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKES 442
Query: 463 FIE 465
IE
Sbjct: 443 LIE 445
>gi|355693530|gb|EHH28133.1| hypothetical protein EGK_18492 [Macaca mulatta]
gi|387541990|gb|AFJ71622.1| ATP-dependent RNA helicase DDX24 [Macaca mulatta]
Length = 856
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 360 DKEQIGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 418
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 419 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 478
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 479 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 519
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 520 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 566
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAI 247
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 248 PVIHAVLQ 255
>gi|380814882|gb|AFE79315.1| ATP-dependent RNA helicase DDX24 [Macaca mulatta]
Length = 856
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 360 DKEQIGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 418
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 419 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 478
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 479 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 519
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 520 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 566
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAI 247
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 248 PVIHAVLQ 255
>gi|119601956|gb|EAW81550.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_a [Homo
sapiens]
Length = 670
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 362 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 420
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 421 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 480
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 481 HFAELSQLLEML------NDSQ-------------YNPKRQTLVFSATLTLVHQAPARIL 521
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 522 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 231 PIMQRLLEEREK 242
P++ +L+ +++
Sbjct: 250 PMIHAVLQWQKR 261
>gi|355778814|gb|EHH63850.1| hypothetical protein EGM_16904 [Macaca fascicularis]
Length = 856
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 360 DKEQIGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 418
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 419 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 478
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 479 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 519
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 520 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 566
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAI 247
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 248 PVIHAVLQ 255
>gi|156848503|ref|XP_001647133.1| hypothetical protein Kpol_1036p17 [Vanderwaltozyma polyspora DSM
70294]
gi|160409987|sp|A7TEG8.1|MAK5_VANPO RecName: Full=ATP-dependent RNA helicase MAK5
gi|156117817|gb|EDO19275.1| hypothetical protein Kpol_1036p17 [Vanderwaltozyma polyspora DSM
70294]
Length = 763
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 161/293 (54%), Gaps = 51/293 (17%)
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 244
+ + +LGF +PT IQ+ IP A +G+DI+G A TGSGKTLA+G+PI+++L++ +
Sbjct: 204 LHGLTKLGFNKPTLIQEEAIPMAL-KGEDIMGKASTGSGKTLAYGIPIIEKLMKSKSNT- 261
Query: 245 KMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR----VVPIVGGM 300
AP G LI TPTRELA QVTDHL+++A I + ++ + GG+
Sbjct: 262 -------------APIG----LIFTPTRELAKQVTDHLRKIASLIVDKSPHAILSLTGGL 304
Query: 301 STEKQERLLK--ARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFFVLDEADRMIENGHF 357
S +KQERLLK +VV TPGR EL+ +K LVE +S VLDEADR++++GHF
Sbjct: 305 SIQKQERLLKYEGSGRIVVATPGRFLELIEK-DKTLVERFSQISTLVLDEADRLLQDGHF 363
Query: 358 RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG 417
E ++I+ L G+ + ++ QT++FSAT A D KL H
Sbjct: 364 DEFENILKYL--------GRESKN---------RKHNWQTMIFSATFA--TDLFDKLSHA 404
Query: 418 SLK-LKQSVNGLNSIET----LSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
S K +K N +E L + ++ ++D ++++++ES IE
Sbjct: 405 SWKNMKTPSKNENEMEIVLKHLMTKIHFKSKPILIDANPEDKVSSQIKESLIE 457
>gi|397525830|ref|XP_003832856.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Pan paniscus]
Length = 859
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 126/228 (55%), Gaps = 25/228 (10%)
Query: 240 REKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
+E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++ +
Sbjct: 363 KEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAIL 421
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GH
Sbjct: 422 VGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGH 481
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 416
F EL +++ML N+ Q KRQTLVFSAT+ L ++ H
Sbjct: 482 FAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARILH 522
Query: 417 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 523 K--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLVPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 250 PMIHVVLQ 257
>gi|388852351|emb|CCF53966.1| related to MAK5-ATP-dependent RNA helicase [Ustilago hordei]
Length = 969
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 177/380 (46%), Gaps = 88/380 (23%)
Query: 171 EFD-----AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAA------------------ 207
EFD AW+ L LHP L +++ GF +PT IQ +P A
Sbjct: 240 EFDDQLLPAWSHLPLHPALKRALAHKGFTKPTEIQDRSLPFALGLQSQQEAESSIDDSHE 299
Query: 208 ----------AHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKY 257
+ + +D++G ++TGSGKTLA+GL I+ L E E A + E+
Sbjct: 300 DAKQATATSSSQKKRDVVGVSQTGSGKTLAYGLAILNHLFENAENAIASSSSRRNALEQV 359
Query: 258 APKGHLRALIITPTRELALQVTDHLKEVAKGINV---------------------RVVPI 296
P L ALI+ PTRELALQV+ HL E+ + + ++ +
Sbjct: 360 PPP--LGALILCPTRELALQVSSHLTEIVRASCIISADDDDDQAEISHKKLLGRPQIAVV 417
Query: 297 VGGMSTEKQERLLKARP---------ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
GGMS +KQ RLL+ R ++++ TPGRLWE+ + + F VLDE
Sbjct: 418 CGGMSEQKQRRLLQGRSRASDRQSGVDIIIATPGRLWEMTRLDDHLAARIKQTRFLVLDE 477
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSN-----EGQSEQTQTCVTVSSLQRKKR------- 395
ADRM++ GHF E++ I++++ T + +GQ Q + S +R+ +
Sbjct: 478 ADRMVQVGHFAEMEHILNLVNRTEARHPVPGKDGQQHQPHHHQSDSESEREVQTHRVKPS 537
Query: 396 ---QTLVFSATIALSADF----RKKLKHGSLK--LKQSVNGLNSIETLSERAGMR-ANVA 445
QT +FSAT++ + R+KLK + K K++ N +++ L R R A
Sbjct: 538 CNMQTFIFSATLSKTLQINLKKRRKLKQLTKKRHCKRNANS-TTLDELVSRIDFRDPTPA 596
Query: 446 IVDLTNVSVLANKLEESFIE 465
++DLT + L ++ +E
Sbjct: 597 VIDLTRAQGMPQGLMQTKLE 616
>gi|302792278|ref|XP_002977905.1| hypothetical protein SELMODRAFT_107914 [Selaginella moellendorffii]
gi|300154608|gb|EFJ21243.1| hypothetical protein SELMODRAFT_107914 [Selaginella moellendorffii]
Length = 741
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 164/308 (53%), Gaps = 62/308 (20%)
Query: 101 NEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEE 160
N ED D DG+E+ + Q E+++ + +K++ ++ K++ D+++
Sbjct: 53 NAEDV-DQDGEEENHDEQGEKDRGQDSTDEDEKEQLDHSQRKKSL-----------DSKK 100
Query: 161 ELVSEAEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
E + F+A + EL + L+++ LG+++PTPIQ ACIP A G+DI G+A
Sbjct: 101 EKFFSSNHGASFNASSFIELNVSRPLLRACDALGYRQPTPIQAACIPLAL-AGRDICGSA 159
Query: 219 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELAL 276
TGSGKT AF LPI++RLL + P+ +R LIITPTRELA+
Sbjct: 160 VTGSGKTAAFALPILERLL-------------------FRPRRIPAIRVLIITPTRELAV 200
Query: 277 QVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 336
Q+ ++++A+ ++R +VGG+S++ QE L+ P++VV TPGR+ + + + V
Sbjct: 201 QLHSMIEKLAQFTDIRCCLVVGGLSSKVQEVALRTHPDIVVATPGRMIDHLRNTQS--VG 258
Query: 337 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 396
L L+ VLDEADR++E G E+ ++ + P +RQ
Sbjct: 259 LEELAILVLDEADRLLELGFREEIHELVKLCP------------------------SRRQ 294
Query: 397 TLVFSATI 404
T++FSAT+
Sbjct: 295 TMLFSATM 302
>gi|194385874|dbj|BAG65312.1| unnamed protein product [Homo sapiens]
Length = 609
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 112 DKEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 170
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 171 LVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 230
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 231 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 271
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 272 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 318
>gi|84578997|dbj|BAE72932.1| hypothetical protein [Macaca fascicularis]
Length = 819
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++
Sbjct: 323 DKEQIGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAI 381
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 382 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 441
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 442 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 482
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 483 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 529
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 151 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAI 210
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 211 PVIHAVLQ 218
>gi|313892323|ref|ZP_07825915.1| DEAD-box ATP-dependent RNA helicase CshA [Dialister microaerophilus
UPII 345-E]
gi|313119182|gb|EFR42382.1| DEAD-box ATP-dependent RNA helicase CshA [Dialister microaerophilus
UPII 345-E]
Length = 491
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 132/233 (56%), Gaps = 48/233 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
++ + EL L +MK++ +GF+EP+PIQK IP A QGKD+IG A+TG+GKT AFG+P
Sbjct: 2 YETFKELGLSEEIMKAVADMGFEEPSPIQKEAIPIAM-QGKDLIGQAQTGTGKTAAFGIP 60
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
I+QR+ + K P+ A++++PTRELA+Q + + +A+ +N+
Sbjct: 61 ILQRI----------------DTSKPGPQ----AIVLSPTRELAIQSAEEINHLAQYMNI 100
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ +PI GG E+Q R LK +P ++V TPGRL + M ++ ++L + VLDE D M
Sbjct: 101 KTIPIYGGQDIERQFRALKKKPNIIVATPGRLMDHM---KRKTIDLSNVQIAVLDEGDEM 157
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++ G ++++I+ P K+RQTL FSAT+
Sbjct: 158 VDMGFIDDIRTIMAATP------------------------KERQTLFFSATM 186
>gi|346466157|gb|AEO32923.1| hypothetical protein [Amblyomma maculatum]
Length = 487
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 126/231 (54%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L+ ++ + LG K P+PIQ+ CIPA + GKD IG A+TGSGKTLAF LPI+Q
Sbjct: 32 FKDLKLNKWMIDQLDTLGIKNPSPIQENCIPAILN-GKDCIGCAKTGSGKTLAFALPILQ 90
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L E+ P G + ALI+TPTRELA Q+++ K V K +R
Sbjct: 91 KLFED-------------------PYG-IFALILTPTRELAFQISEQFKVVGKAAGLRDC 130
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGGM Q ++L P +VV TPGRL + + L + F VLDEADR++E
Sbjct: 131 VIVGGMDMVTQGQILAESPHVVVATPGRLADHLESCNTF--TLKRIRFLVLDEADRLLE- 187
Query: 355 GHFRE-LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
GHF E L++I LP KKRQTL+FSATI
Sbjct: 188 GHFNEQLKTIFAALP------------------------KKRQTLLFSATI 214
>gi|449516409|ref|XP_004165239.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
28-like [Cucumis sativus]
Length = 733
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 132/234 (56%), Gaps = 48/234 (20%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPI 232
+++ EL L L+++ LG+ +PTPIQ ACIP A G+DI G+A TGSGKT AF LP
Sbjct: 135 NSFMELNLSRPLIRACEALGYAKPTPIQAACIPLAL-TGRDICGSAITGSGKTAAFSLPT 193
Query: 233 MQRLLEEREKAGKMLEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGIN 290
++RLL Y PK +R LI+TP RELA+QV ++++A+ +
Sbjct: 194 LERLL-------------------YRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTD 234
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+R IVGG+S ++QE L++ P++VV TPGR+ + + V+L L+ +LDEADR
Sbjct: 235 IRCCLIVGGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMS--VDLDDLAVLILDEADR 292
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++E G E++ ++ + P K+RQT++FSAT+
Sbjct: 293 LLELGFSAEIRELVRLCP------------------------KRRQTMLFSATM 322
>gi|358065451|ref|ZP_09151993.1| hypothetical protein HMPREF9473_04056 [Clostridium hathewayi
WAL-18680]
gi|356696343|gb|EHI57960.1| hypothetical protein HMPREF9473_04056 [Clostridium hathewayi
WAL-18680]
Length = 534
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 132/230 (57%), Gaps = 42/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L PLL+K++ + G+ +P+PIQ+ IP + +D++G A+TG+GKT AF LPI+Q
Sbjct: 3 FKELNLSPLLLKALEKKGYSQPSPIQEQAIPYVLEK-RDLLGCAQTGTGKTAAFALPIIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L+E K + K +RALI+TPTRELALQ+ D++KE + V+
Sbjct: 62 NLMECPRKRQQ--------------KKPIRALILTPTRELALQIADNIKEYGEYTPVKGT 107
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S Q + L+ +++V TPGRL +L+ E ++L + FVLDEADRM++
Sbjct: 108 VIFGGVSAVPQIQDLRKGVDILVATPGRLNDLIGQRE---IDLSYVEIFVLDEADRMLDM 164
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ +I +LP KKRQTL+FSAT+
Sbjct: 165 GFIHDVKKVIALLP------------------------KKRQTLLFSATM 190
>gi|440905703|gb|ELR56052.1| ATP-dependent RNA helicase DDX24 [Bos grunniens mutus]
Length = 850
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 124/226 (54%), Gaps = 23/226 (10%)
Query: 239 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 298
+ E+AGK+ +E G PK L L++TPTRELA+QV H+ VAK +++ +VG
Sbjct: 361 DEEQAGKLKQELG--GSTVPPKRPLLGLVLTPTRELAVQVKQHVDAVAKFTSIKTAILVG 418
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
GMST+KQ+RLL +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 419 GMSTQKQQRLLNRQPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 478
Query: 359 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 418
EL ++++L S KRQTLVFSAT+ L ++ H
Sbjct: 479 ELSQLLEVL-------------------SDSQYNPKRQTLVFSATLTLVHQAPARILHK- 518
Query: 419 LKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 519 -KHAKKMDKTAKLDLLMQKIGMRGKPKVIDLTRKEATVETLTETKI 563
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 231 PIMQRLL 237
P++ +L
Sbjct: 249 PMIDAVL 255
>gi|449460106|ref|XP_004147787.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Cucumis
sativus]
Length = 733
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 132/234 (56%), Gaps = 48/234 (20%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPI 232
+++ EL L L+++ LG+ +PTPIQ ACIP A G+DI G+A TGSGKT AF LP
Sbjct: 135 NSFMELNLSRPLIRACEALGYAKPTPIQAACIPLAL-TGRDICGSAITGSGKTAAFSLPT 193
Query: 233 MQRLLEEREKAGKMLEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGIN 290
++RLL Y PK +R LI+TP RELA+QV ++++A+ +
Sbjct: 194 LERLL-------------------YRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTD 234
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+R IVGG+S ++QE L++ P++VV TPGR+ + + V+L L+ +LDEADR
Sbjct: 235 IRCCLIVGGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMS--VDLDDLAVLILDEADR 292
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++E G E++ ++ + P K+RQT++FSAT+
Sbjct: 293 LLELGFSAEIRELVRLCP------------------------KRRQTMLFSATM 322
>gi|218186850|gb|EEC69277.1| hypothetical protein OsI_38328 [Oryza sativa Indica Group]
Length = 802
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 138/254 (54%), Gaps = 48/254 (18%)
Query: 153 NGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
+G D + S S +++ EL L L+++ LG+++PTPIQ ACIP A G+
Sbjct: 174 SGVVDPSKFFASSEGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLAL-TGR 232
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITP 270
DI G+A TGSGKT AF LP+++RLL + PK +R LI+TP
Sbjct: 233 DICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILTP 273
Query: 271 TRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGG 330
TRELA V ++++A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + +
Sbjct: 274 TRELAAPVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNS 333
Query: 331 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 390
V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 334 LS--VGLEDLAILILDEADRLLELGFSAEIQELIRMCP---------------------- 369
Query: 391 QRKKRQTLVFSATI 404
++RQT++FSAT+
Sbjct: 370 --RRRQTMLFSATM 381
>gi|302804021|ref|XP_002983763.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
gi|300148600|gb|EFJ15259.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
Length = 418
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 136/263 (51%), Gaps = 49/263 (18%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL 236
EL + L+ + LG + PTP+Q+AC+P +GKD++G A+TGSGKT AF LPI+QRL
Sbjct: 6 ELGVAEWLVGACKELGMRHPTPVQRACVPQIL-KGKDVLGMAQTGSGKTAAFALPILQRL 64
Query: 237 LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
GE P G + AL++TPTRELA Q++D K + G+++R +
Sbjct: 65 --------------GEN-----PYG-IFALVMTPTRELAFQISDQFKALGAGVHLRCAVV 104
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
VGGM Q ++L RP +V+ TPGR+ + F VLDEAD +++ G
Sbjct: 105 VGGMDMTTQAQILTERPHVVIATPGRIKAHLGSDPDIAAAFSKTKFLVLDEADLLLDRGF 164
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA--LSADFRKKL 414
ELQ+I D + K+RQTL+FSAT+ L A R
Sbjct: 165 QDELQTIFDGIS------------------------KQRQTLLFSATMTGDLQA-LRDLF 199
Query: 415 KHGSLKLKQSVNGLNSIETLSER 437
H + Q+ GL ++E+L +R
Sbjct: 200 GHRAF-FYQAYEGLKTVESLDQR 221
>gi|225457931|ref|XP_002273443.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Vitis
vinifera]
Length = 732
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 134/239 (56%), Gaps = 48/239 (20%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPI 232
+++ EL L L+++ LG+ +PTPIQ ACIP A G+DI G+A TGSGKT AF LP
Sbjct: 125 NSFLELNLSRPLLRACEALGYTKPTPIQAACIPIAL-TGRDICGSAITGSGKTAAFSLPT 183
Query: 233 MQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKEVAKGIN 290
++RLL + PK +R L++TPTRELA+QV ++++A+ +
Sbjct: 184 LERLL-------------------FRPKRVQAIRVLVLTPTRELAVQVHSMMEKLAQFTD 224
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+R IVGG+S++ QE L++ P++VV TPGR+ + + V+L L+ +LDEADR
Sbjct: 225 IRCCLIVGGLSSKMQETALRSMPDVVVATPGRMIDHLRNSMS--VDLEDLAVLILDEADR 282
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
++E G E++ ++ + P K+RQT++FSAT+ D
Sbjct: 283 LLELGFNAEIRELVRLCP------------------------KRRQTMLFSATMTEEVD 317
>gi|195437654|ref|XP_002066755.1| GK24389 [Drosophila willistoni]
gi|194162840|gb|EDW77741.1| GK24389 [Drosophila willistoni]
Length = 808
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 147/238 (61%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +WNE P ++ I R+G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 375 IPNPIRSWNESGFPPEIIDIIDRVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 433
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 434 FLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFGQ 482
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 483 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 539
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + + + ++ + + +KK RQT++F+AT+
Sbjct: 540 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDESKLMENFYTKKKYRQTVMFTATM 597
>gi|417405017|gb|JAA49234.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 863
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 123/228 (53%), Gaps = 23/228 (10%)
Query: 239 EREKAGKMLEEKGEEAE--KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
+ E GK+ +E G E K PK L L++TPTRELA+QV H+ VA+ ++ +
Sbjct: 364 DEEWTGKLEQELGGETVTCKAHPKRPLLGLVLTPTRELAVQVKQHMDAVARFTGIKTAIL 423
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
VGGMST+KQ+R+L +PE+VV TPGRLWEL+ HL L L V+DEADRM+E GH
Sbjct: 424 VGGMSTQKQQRMLNRQPEIVVATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGH 483
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 416
F EL +++ML S KRQTLVFSAT+ L ++ H
Sbjct: 484 FAELSQLLEML-------------------SDSQYNPKRQTLVFSATLTLVHQAPARILH 524
Query: 417 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 525 K--KHTKKIDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 570
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFTAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 249 PMIHSVLQ 256
>gi|395827747|ref|XP_003787057.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Otolemur garnettii]
Length = 861
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 117/209 (55%), Gaps = 21/209 (10%)
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 315
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+LK PE+
Sbjct: 384 KAYPKHPLLGLVLTPTRELAVQVRQHIDAVAKFTGIKTAILVGGMSTQKQQRMLKRCPEI 443
Query: 316 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 375
V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML N+
Sbjct: 444 VIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML------ND 497
Query: 376 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 435
Q KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 498 SQYN-------------PKRQTLVFSATLTLIHQVPARILHK--KHTKKMDKTAKLDLLM 542
Query: 436 ERAGMRANVAIVDLTNVSVLANKLEESFI 464
++ GMR+ ++DLT L E+ I
Sbjct: 543 QKIGMRSKPKVIDLTRKEATVETLTETKI 571
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
T + P A+ + ++ + AW +L + +++++ LGF PTPIQ + A
Sbjct: 167 TTAKVPKQAKTWMPEVSDQKADVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIR 226
Query: 210 QGKDIIGAAETGSGKTLAFGLPIMQRLLEEREK 242
DI+GAAETGSGKTLAF +P++ +L+ +++
Sbjct: 227 DKLDILGAAETGSGKTLAFAIPVIHAVLQWQKR 259
>gi|114654532|ref|XP_001151974.1| PREDICTED: ATP-dependent RNA helicase DDX24 isoform 6 [Pan
troglodytes]
gi|410227214|gb|JAA10826.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
gi|410252476|gb|JAA14205.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
gi|410299418|gb|JAA28309.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
gi|410331293|gb|JAA34593.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
Length = 859
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 124/228 (54%), Gaps = 25/228 (10%)
Query: 240 REKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
+E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++ +
Sbjct: 363 KEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAIL 421
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GH
Sbjct: 422 VGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGH 481
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 416
F EL +++ML S KRQTLVFSAT+ L ++ H
Sbjct: 482 FAELSQLLEML-------------------SDSQYNPKRQTLVFSATLTLVHQAPARILH 522
Query: 417 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 523 K--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLVPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 250 PMIHAVLQ 257
>gi|343962287|dbj|BAK62731.1| ATP-dependent RNA helicase DDX24 [Pan troglodytes]
Length = 859
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 124/228 (54%), Gaps = 25/228 (10%)
Query: 240 REKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
+E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+ ++ +
Sbjct: 363 KEQTGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAIL 421
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GH
Sbjct: 422 VGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGH 481
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 416
F EL +++ML S KRQTLVFSAT+ L ++ H
Sbjct: 482 FAELSQLLEML-------------------SDSQYNPKRQTLVFSATLTLVHQAPARILH 522
Query: 417 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 523 K--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 568
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLVPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 250 PMIHAVLQ 257
>gi|355621610|ref|ZP_09046211.1| hypothetical protein HMPREF1020_00290 [Clostridium sp. 7_3_54FAA]
gi|354823417|gb|EHF07748.1| hypothetical protein HMPREF1020_00290 [Clostridium sp. 7_3_54FAA]
Length = 477
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 132/230 (57%), Gaps = 42/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L PLL+K++ G+ P+PIQ+ IP G+D++G A+TG+GKT AF LPI+Q
Sbjct: 3 FKDLQLSPLLLKALEEKGYVSPSPIQEKAIPHVL-AGRDVLGCAQTGTGKTAAFALPIIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L++ EK KY+ K +R+LI+TPTRELALQ+ ++ KE +VR
Sbjct: 62 NLMKPSEK-------------KYS-KRVIRSLILTPTRELALQIAENFKEYGSRTSVRCA 107
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S Q L+ +++V TPGRL +L+ G V+L + FVLDEADRM++
Sbjct: 108 VIFGGVSANPQIEELRRGIDILVATPGRLNDLVGQG---FVDLAHVEIFVLDEADRMLDM 164
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II +LP+ ++QTL+FSAT+
Sbjct: 165 GFIHDVRKIISLLPV------------------------RKQTLLFSATM 190
>gi|403298098|ref|XP_003939872.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Saimiri boliviensis
boliviensis]
Length = 860
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 127/229 (55%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y P+ L L++TPTRELALQV H+ VA+ ++
Sbjct: 363 DKEQTGNLKQELDDKSATCKAY-PERPLLGLVLTPTRELALQVKQHIDAVARFTGIKTAI 421
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 422 LVGGMSTQKQQRMLNRYPEIVIATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 481
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 482 HFAELSQLLEML------NDSQY-------------NPKRQTLVFSATLTLVHQAPARIL 522
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT A L E+ I
Sbjct: 523 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATAETLTETKI 569
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 192 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 251
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 252 PMIHAVLQ 259
>gi|315645365|ref|ZP_07898490.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
gi|315279407|gb|EFU42713.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
Length = 506
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 132/230 (57%), Gaps = 42/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L + P+++K++ + +KEPTPIQ IPA G+D++G A+TG+GKT AF +P++Q
Sbjct: 19 FQDLNISPVILKALAKENYKEPTPIQAQAIPAVL-AGRDLLGCAQTGTGKTAAFSVPMIQ 77
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L E+ K G +RAL+++PTRELALQ++D++K ++ +R
Sbjct: 78 LLNEQPPKPGMA--------------RRIRALVLSPTRELALQISDNVKAYSQFTKLRST 123
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG+S + QER L+ ++++ TPGRL +LM+ + ++L + VLDEADRM++
Sbjct: 124 AIVGGVSQKTQERALQQGADILIATPGRLLDLMN---QKRIDLQHVEILVLDEADRMLDM 180
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II +P K+QTL FSAT+
Sbjct: 181 GFIHDVKRIISKMP------------------------SKKQTLFFSATM 206
>gi|335292920|ref|XP_003356831.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Sus scrofa]
Length = 856
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 116/206 (56%), Gaps = 21/206 (10%)
Query: 259 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 318
PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+V+
Sbjct: 381 PKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRQPEIVIA 440
Query: 319 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQS 378
TPGRLWEL+ + HL L L V+DEADRM+E GHF EL +++ML N+ Q
Sbjct: 441 TPGRLWELVKEKQPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML------NDSQY 494
Query: 379 EQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERA 438
KRQTLVFSAT+ L ++ H K + ++ ++ L ++
Sbjct: 495 N-------------PKRQTLVFSATLTLVHQAPARILHK--KHAKKIDKTAKLDLLMQKI 539
Query: 439 GMRANVAIVDLTNVSVLANKLEESFI 464
GMR ++DLT L E+ I
Sbjct: 540 GMRGKPKVIDLTRNEATVETLTETKI 565
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 249 PMIHAVLQ 256
>gi|258645792|ref|ZP_05733261.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Dialister invisus
DSM 15470]
gi|260403163|gb|EEW96710.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Dialister invisus
DSM 15470]
Length = 510
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 132/233 (56%), Gaps = 48/233 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
+D + EL L P +MK+I +GF+EPTPIQK IPAA +GKD+IG A+TG+GKT AFG+P
Sbjct: 2 YDTFKELGLVPEIMKAIEDMGFEEPTPIQKVSIPAAM-EGKDLIGQAQTGTGKTAAFGIP 60
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
I++++ EKG +A ++++PTRELA+Q + + +A+ + +
Sbjct: 61 ILEKI---------DTTEKGPQA-----------IVLSPTRELAIQSAEEMNRLAQYLPI 100
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+PI GG E+Q R L+ +P ++V TPGRL + M G ++L + VLDE D M
Sbjct: 101 HALPIYGGQDIERQFRALRKKPNIIVATPGRLMDHMKRGT---IDLSHVQILVLDEGDEM 157
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++ G ++++I+ +P ++RQT+ FSAT+
Sbjct: 158 VDMGFIDDIRTILAGMP------------------------EERQTMFFSATM 186
>gi|226958385|ref|NP_001152974.1| ATP-dependent RNA helicase DDX24 isoform 1 [Mus musculus]
Length = 903
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 241 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 298
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 410 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 469
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 470 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 529
Query: 359 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 418
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 530 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 569
Query: 419 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 570 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 600
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 237 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 296
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 297 PMIHSVLQ 304
>gi|9931363|gb|AAG02170.1|AF214732_1 ATP-dependent RNA helicase [Mus musculus]
Length = 857
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 241 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 298
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 364 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 423
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 483
Query: 359 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 418
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 484 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 523
Query: 419 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 524 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 554
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 191 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 250
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 251 PMIHSVLQ 258
>gi|34328253|ref|NP_065240.2| ATP-dependent RNA helicase DDX24 isoform 2 [Mus musculus]
gi|341940454|sp|Q9ESV0.2|DDX24_MOUSE RecName: Full=ATP-dependent RNA helicase DDX24; AltName: Full=DEAD
box protein 24
gi|32967660|gb|AAH55048.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Mus musculus]
gi|33244019|gb|AAH55317.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Mus musculus]
gi|148686888|gb|EDL18835.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_b [Mus
musculus]
Length = 857
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 241 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 298
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 364 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 423
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 483
Query: 359 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 418
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 484 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 523
Query: 419 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 524 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 554
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 191 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 250
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 251 PMIHSVLQ 258
>gi|302795308|ref|XP_002979417.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
gi|300152665|gb|EFJ19306.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
Length = 749
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 162/306 (52%), Gaps = 56/306 (18%)
Query: 101 NEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEE 160
N ED D DG+E+ + Q+E+++ + +K++ ++ K++ + + +
Sbjct: 53 NAEDV-DQDGEEENDDEQREEDRGQDSTDEDEKEQLDHSQRKKSL-------DSKKEKPQ 104
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAET 220
S S ++ EL + L+++ LG+++PTPIQ ACIP A G+DI G+A T
Sbjct: 105 FFSSNHGASFNASSFIELNVSRPLLRACDALGYRQPTPIQAACIPLAL-AGRDICGSAVT 163
Query: 221 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQV 278
GSGKT AF LPI++RLL + P+ +R LIITPTRELA+Q+
Sbjct: 164 GSGKTAAFALPILERLL-------------------FRPRRIPAIRVLIITPTRELAVQL 204
Query: 279 TDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH 338
++++A+ ++R +VGG+S++ QE L+ P++VV TPGR+ + + + V L
Sbjct: 205 HSMIEKLAQFTDIRCSLVVGGLSSKVQEVALRTHPDIVVATPGRMIDHLRNTQS--VGLE 262
Query: 339 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTL 398
L+ VLDEADR++E G E+ ++ + P +RQT+
Sbjct: 263 ELAILVLDEADRLLELGFREEIHELVKLCP------------------------SRRQTM 298
Query: 399 VFSATI 404
+FSAT+
Sbjct: 299 LFSATM 304
>gi|148686887|gb|EDL18834.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_a [Mus
musculus]
Length = 943
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 241 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 298
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 450 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 509
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 510 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 569
Query: 359 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 418
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 570 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 609
Query: 419 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 610 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 640
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 277 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 336
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 337 PMIHSVLQ 344
>gi|255724828|ref|XP_002547343.1| hypothetical protein CTRG_01650 [Candida tropicalis MYA-3404]
gi|240135234|gb|EER34788.1| hypothetical protein CTRG_01650 [Candida tropicalis MYA-3404]
Length = 711
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 204/387 (52%), Gaps = 58/387 (14%)
Query: 100 ANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAE 159
A EED G DE+ + EQE +++ ++ ++K + + ++ + E
Sbjct: 40 AMEEDEFGGFEDEEDDKKDDEQEDEQGDEQEDEQGDEQK--------DEPSTADSDKNGE 91
Query: 160 EELVSEAEISTEFDAWNELRLHPLLMK-------------SIYRLGFKEPTPIQKACIPA 206
+VS A + NE+ L P+ K + +LGF++PTPIQK IP
Sbjct: 92 LGIVSFANLDLPLPDDNEINL-PIWQKGDLGSSISGYTLNGLSQLGFQKPTPIQKETIPI 150
Query: 207 AAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRAL 266
A QGKD+IG A TGSGKTLA+G+PI+++ ++ + +++ ++ + P G +
Sbjct: 151 AL-QGKDVIGKATTGSGKTLAYGIPILEKYIQ----SLNTIKQNNKDKKINHPTG----I 201
Query: 267 IITPTRELALQVTDHLKEVAKG--INVR-VVPIVGGMSTEKQERLLKARPELVVGTPGRL 323
I PTRELA QV +HL +AK ++ R +V I GG+S +KQ+RLLK P ++V TPGRL
Sbjct: 202 IFAPTRELAHQVVEHLNALAKYSPLSTRGIVSITGGLSIQKQQRLLKHGPGIIVATPGRL 261
Query: 324 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQT 383
EL+ G + L + VLDEADR++++GHF E + I+++ G N +++ T+
Sbjct: 262 LELIQGDLELCKRLASTDIIVLDEADRLLQDGHFEEFEKILELF----GKNRPRNKSTEW 317
Query: 384 CVTVSSLQRKKRQTLVFSATIALS----ADFRKKLKHGSLKLKQSVNGLNSIETLSERAG 439
K QTLVFSAT + D R+K K SL V ++ L+++
Sbjct: 318 ----------KWQTLVFSATFSRDLFGKLDKRQKGKTSSLMHNDEV-----VKLLNDKLK 362
Query: 440 MR-ANVAIVDLTNVSVLANKLEESFIE 465
+ A+VD +++ ++ E+ +E
Sbjct: 363 FKDKKPAMVDANPKEIVSGQITEALVE 389
>gi|74141078|dbj|BAE22104.1| unnamed protein product [Mus musculus]
Length = 622
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 241 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 298
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 364 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 423
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 483
Query: 359 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 418
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 484 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 523
Query: 419 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 524 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 554
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 191 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 250
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 251 PMIHSVLQ 258
>gi|357152627|ref|XP_003576182.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 1
[Brachypodium distachyon]
Length = 780
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 141/255 (55%), Gaps = 49/255 (19%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
S+ PD ++ SE S + +++ EL + L+++ LG+++PTPIQ ACIP A G
Sbjct: 155 SSTPDPSKFFSSSEGA-SFKANSFLELNISRPLLRACEALGYQKPTPIQAACIPLAL-TG 212
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIIT 269
+DI G+A TGSGKT AF LP+++RLL + PK +R LI+T
Sbjct: 213 RDICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILT 253
Query: 270 PTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 329
PTRELA QV ++++A+ ++R IVGG+ T+ QE L++ P++VV TPGR+ + +
Sbjct: 254 PTRELAAQVHSMIEKLAQFTDIRCCLIVGGLPTKVQEVALRSNPDIVVATPGRIIDHLRN 313
Query: 330 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS 389
V L L+ +LDEADR++E G E+ +I M P
Sbjct: 314 SLS--VGLEDLAILILDEADRLLELGFSVEINELIRMCP--------------------- 350
Query: 390 LQRKKRQTLVFSATI 404
K+RQT++FSAT+
Sbjct: 351 ---KRRQTMLFSATM 362
>gi|357152629|ref|XP_003576183.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 2
[Brachypodium distachyon]
Length = 770
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 141/255 (55%), Gaps = 49/255 (19%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
S+ PD ++ SE S + +++ EL + L+++ LG+++PTPIQ ACIP A G
Sbjct: 145 SSTPDPSKFFSSSEGA-SFKANSFLELNISRPLLRACEALGYQKPTPIQAACIPLAL-TG 202
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIIT 269
+DI G+A TGSGKT AF LP+++RLL + PK +R LI+T
Sbjct: 203 RDICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILT 243
Query: 270 PTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 329
PTRELA QV ++++A+ ++R IVGG+ T+ QE L++ P++VV TPGR+ + +
Sbjct: 244 PTRELAAQVHSMIEKLAQFTDIRCCLIVGGLPTKVQEVALRSNPDIVVATPGRIIDHLRN 303
Query: 330 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS 389
V L L+ +LDEADR++E G E+ +I M P
Sbjct: 304 SLS--VGLEDLAILILDEADRLLELGFSVEINELIRMCP--------------------- 340
Query: 390 LQRKKRQTLVFSATI 404
K+RQT++FSAT+
Sbjct: 341 ---KRRQTMLFSATM 352
>gi|330840963|ref|XP_003292476.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
gi|325077283|gb|EGC31006.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
Length = 780
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 128/237 (54%), Gaps = 44/237 (18%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
+ E + EL L L+K++ +LGF +PTPIQ IP A + GKDI+ +A TGSGKT A
Sbjct: 177 VEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKTIPLALN-GKDILASASTGSGKTAA 235
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F LPI++RLL ++E A +R L++ PTRELALQ L+ +A+
Sbjct: 236 FLLPILERLL-------------FRDSEYRA----IRVLVLLPTRELALQCQSVLENLAQ 278
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
N+ IVGG+S + QE L+ RP++V+ TPGRL + + H + L L +LDE
Sbjct: 279 FSNITSCLIVGGLSNKAQEVELRKRPDVVIATPGRLIDHLLNA--HGIGLEDLEILILDE 336
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADR+++ G E+ I+D P + RQT++FSAT+
Sbjct: 337 ADRLLDMGFKDEINKIVDSCPTS------------------------RQTMLFSATL 369
>gi|403347561|gb|EJY73206.1| ATP-dependent RNA helicase DDX24 [Oxytricha trifallax]
Length = 780
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 127/199 (63%), Gaps = 17/199 (8%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQ-KACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
W + + L +S+ F +PT +Q ++ + AH D++ AA+TG GKTL FG+PI+
Sbjct: 35 WMQFDMSEELAESLVANQFVQPTDVQAQSLVFLNAHV--DMVIAAKTGQGKTLTFGIPIL 92
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA---KGIN 290
L++ ++++++ E E++ ++ALI++PTRELA+Q+ DH++ V
Sbjct: 93 DLLIK------RLIKDQSGEPEEFTS---IKALIMSPTRELAIQIKDHIQAVVPVQYQNK 143
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE--LHTLSFFVLDEA 348
+++ P+VGGMS +KQERLL P +V+ TPGRLWEL++ ++ L + VLDEA
Sbjct: 144 IKLCPLVGGMSIQKQERLLSYNPTIVIATPGRLWELLNERMNPYLQSALPMIDVLVLDEA 203
Query: 349 DRMIENGHFRELQSIIDML 367
DRMIE+GHF+E++ I+D +
Sbjct: 204 DRMIEDGHFKEMKYILDYV 222
>gi|323356090|gb|EGA87895.1| Mak5p [Saccharomyces cerevisiae VL3]
Length = 526
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 40/293 (13%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 243
+++S+ L F PT IQK IP QG D++G A TGSGKTLA+G+PI+++L+ +
Sbjct: 3 ILQSLQNLNFLRPTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSQK 61
Query: 244 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGG 299
K P +LI TPTRELA QVTDHLK++ + + ++ + GG
Sbjct: 62 NK------------KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGG 105
Query: 300 MSTEKQERLLKA--RPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 357
+S +KQ+RLLK ++V+ TPGR EL+ + + +LDEADR++++GHF
Sbjct: 106 LSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHF 165
Query: 358 RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG 417
E + II L + N SE + K QTL+FSAT S D KL
Sbjct: 166 DEFEKIIKHLLVERRKNRENSEGSS----------KIWQTLIFSAT--FSIDLFDKLSSS 213
Query: 418 ----SLKLKQSVNGLNS-IETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
+ K + + LN+ I+ L + + I+D S ++++++ES IE
Sbjct: 214 RQVKDRRFKNNEDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIE 266
>gi|74147720|dbj|BAE38731.1| unnamed protein product [Mus musculus]
Length = 792
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 241 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 298
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 365 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 424
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 425 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 484
Query: 359 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 418
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 485 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 524
Query: 419 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 525 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 555
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 191 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 250
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 251 PMIHSVLQ 258
>gi|427783023|gb|JAA56963.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 467
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 124/231 (53%), Gaps = 50/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L+ ++ + LG +P+PIQ+ CIPA GKD IG A+TGSGKTLAF LPI+Q
Sbjct: 12 FADLKLNKWIIDQLETLGISKPSPIQENCIPAIL-SGKDCIGCAKTGSGKTLAFALPILQ 70
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L E+ P G + ALI+TPTRELA Q+ D K V K + ++
Sbjct: 71 KLFED-------------------PYG-IFALILTPTRELAFQICDQFKVVGKAVGLKEC 110
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGGM Q ++L P +VV TPGRL + + L + F VLDEADR++E
Sbjct: 111 VIVGGMDMVTQGQVLAESPHVVVATPGRLADHLESCNTF--TLKRIRFLVLDEADRLLE- 167
Query: 355 GHFRE-LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
GHF E L++I LP KRQTL+FSATI
Sbjct: 168 GHFNEQLKTIFAALP-------------------------KRQTLLFSATI 193
>gi|291413819|ref|XP_002723168.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Oryctolagus
cuniculus]
Length = 848
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 117/216 (54%), Gaps = 21/216 (9%)
Query: 249 EKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERL 308
E G A + P L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+R+
Sbjct: 364 EGGAAAWEAPPARPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRM 423
Query: 309 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 368
L PE+V+ TPGRLWEL+ HL L L VLDEADRM+E GHF EL +++ML
Sbjct: 424 LNRHPEIVIATPGRLWELIKERHSHLSNLRQLRCLVLDEADRMVEKGHFAELSQLLEML- 482
Query: 369 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGL 428
N+ Q +RQTLVFSAT+ L +L H K + ++
Sbjct: 483 -----NDSQYN-------------PQRQTLVFSATLTLVHQLPARLLHK--KHTKKMDKT 522
Query: 429 NSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
++ L ++ GMR ++DLT L E+ I
Sbjct: 523 AKLDLLVQKVGMRGKPKVIDLTRNEATVETLTETKI 558
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 186 DVSAWKDLFVPTPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 245
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 246 PMIHAVLQ 253
>gi|392571512|gb|EIW64684.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 772
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 157/318 (49%), Gaps = 60/318 (18%)
Query: 107 DGDGDE-DGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSE 165
D G+E DG +++E L + + ++ + + E+ S+ DD+EEE ++
Sbjct: 105 DASGEEFDGLSADEDEEDPLATSDEEAGAEAEEDEAMSDEEDEDAASSSGDDSEEETEAQ 164
Query: 166 --------------AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
AE T F + N L ++KSI LGF PTPIQ A IP A G
Sbjct: 165 KERKAAYFDSEQGPAEAHTSFLSMN---LSRPIIKSITTLGFTTPTPIQAATIPVAL-LG 220
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 271
KD++G A TGSGKT AF +P+++RL M ++G++A R LI+ PT
Sbjct: 221 KDVVGNAVTGSGKTAAFIIPMLERL---------MYRDRGKKA------AATRCLILAPT 265
Query: 272 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 331
RELA+Q + ++A ++R +VGG+S + QE L+ RP++V+ TPGRL + +
Sbjct: 266 RELAVQCYEVGSKLAAHTDIRFALVVGGLSVKAQETNLRTRPDVVIATPGRLIDHLRNSP 325
Query: 332 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 391
L L VLDEADRM+E+G EL II P +
Sbjct: 326 T--FTLDALDILVLDEADRMLEDGFSDELTEIITSCPTS--------------------- 362
Query: 392 RKKRQTLVFSATIALSAD 409
RQT++FSAT+ S D
Sbjct: 363 ---RQTMLFSATMTDSVD 377
>gi|255718883|ref|XP_002555722.1| KLTH0G15840p [Lachancea thermotolerans]
gi|238937106|emb|CAR25285.1| KLTH0G15840p [Lachancea thermotolerans CBS 6340]
Length = 797
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 220/513 (42%), Gaps = 102/513 (19%)
Query: 9 TYEHSKETKPNRRKRTRKSREAEKLN-----SLKWNSSFSAADNDPFAFLVGSNELDGGF 63
T+ + KP R+ ++ + E LN LKW S D F G E+DG
Sbjct: 28 THTKKRIVKPKRQTQSTRDEEKRNLNVVGANELKWKSVEIPDTMDDFGGFYGLEEIDGVD 87
Query: 64 LSL-----EEIDEASYNLQIPKPEKGKPGKKTNTKKRKRSSANEEDPGDG---------- 108
+ + + I N++ P+PE+ SS E +P DG
Sbjct: 88 VKVVNGKVQFITRNDSNIKGPEPEEP-------------SSQGEVEPSDGQEMEELVEFK 134
Query: 109 ---------------DGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSN 153
+G+++ N E + G++K+++ + ++ N
Sbjct: 135 NFDDFEEGELSAASSNGEDNENYSDNELGQEESENAGEQKQEQNHEESEANASGAIMEDN 194
Query: 154 GPDDAEEELVSEAEISTEFDA-------WNE-LRLHPLLMKSIYRLGFKEPTPIQKACIP 205
D E + AE+S + W E + L ++ + GF +PT IQ IP
Sbjct: 195 AADGELETNIFGAELSIPDNVEPDLLPQWTETMNLSMTTLQGLAAQGFTKPTDIQSMTIP 254
Query: 206 AAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA 265
A +GKDI+G A TGSGKTLA+G+PI++RL+ +R +
Sbjct: 255 PAL-EGKDIMGKASTGSGKTLAYGIPILERLVADRTTDKTV------------------G 295
Query: 266 LIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLK--ARPELVVGT 319
LI TPTRELA QVT HL+++A I ++ + GG+S +KQERLLK +VV T
Sbjct: 296 LIFTPTRELAHQVTQHLQKLACVIIKKSPYAIISLTGGLSIQKQERLLKYDGCARIVVAT 355
Query: 320 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE 379
PGR E++ K + VLDE DR++++GHF E I+ L G++
Sbjct: 356 PGRFLEMLERDPKLIDRFSQTDCLVLDEVDRLLQDGHFEEFDKILKHL--------GKAR 407
Query: 380 QTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLN-------SIE 432
+ V S QT+VFSAT S D KL S K V G S++
Sbjct: 408 NMKKKVK-SEFAGTGWQTMVFSAT--FSVDLFNKLSTTSWK---KVGGGKDDDEMELSLK 461
Query: 433 TLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
L + R+ I+D + +K++ES IE
Sbjct: 462 HLMTKIHFRSKPVIIDADPDHKIHSKIKESLIE 494
>gi|329926082|ref|ZP_08280693.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
gi|328939480|gb|EGG35833.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
Length = 506
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 133/230 (57%), Gaps = 42/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L + P+++K++ + +K PTPIQ IPA G+D++G A+TG+GKT AF +P++Q
Sbjct: 3 FEDLNISPVILKALAKENYKAPTPIQAQAIPAVL-AGRDLLGCAQTGTGKTAAFSVPMIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L ++ K G +RAL+++PTRELALQ++D++K ++ +R
Sbjct: 62 LLNQQPPKPGM--------------GRRIRALVLSPTRELALQISDNVKAYSQFTKLRST 107
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG+S + QER L+ ++++ TPGRL +LM+ +KH V+L + VLDEADRM++
Sbjct: 108 AIVGGVSQKTQERALQQGADILIATPGRLLDLMN--QKH-VDLQHVEILVLDEADRMLDM 164
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II +P K+QTL FSAT+
Sbjct: 165 GFIHDVKRIIAKMP------------------------SKKQTLFFSATM 190
>gi|297800452|ref|XP_002868110.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
gi|297313946|gb|EFH44369.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 133/239 (55%), Gaps = 48/239 (20%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
+S D++ EL L L+++ LG+K+PTPIQ ACIP A G+D+ +A TGSGKT A
Sbjct: 165 VSFHADSFMELNLSRPLLRACETLGYKKPTPIQAACIPLAL-TGRDLCASAITGSGKTAA 223
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKEV 285
F LP ++RLL + PK R LI+TPTRELA+Q+ ++++
Sbjct: 224 FALPTLERLL-------------------FRPKRVFATRVLILTPTRELAVQIHSMIQKL 264
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A+ +++ IVGG+S +QE +L++ P++VV TPGR+ + + V+L L+ +L
Sbjct: 265 AQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLIL 322
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADR+++ G E+ ++ + P K+RQT++FSAT+
Sbjct: 323 DEADRLLQTGFATEITELVRLCP------------------------KRRQTMLFSATM 357
>gi|270005640|gb|EFA02088.1| hypothetical protein TcasGA2_TC007723 [Tribolium castaneum]
Length = 447
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 124/232 (53%), Gaps = 49/232 (21%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++++L+L+P +++ +G + PTPIQ CIP G+D IGAA+TGSGKTLAF LPI+
Sbjct: 5 SFDKLQLNPWIIRQCATIGVRSPTPIQTNCIPPIL-AGRDCIGAAKTGSGKTLAFALPIL 63
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q+L E+ P G + ALI+TPTRELA Q+ D + K +N+R
Sbjct: 64 QKLCED-------------------PYG-IFALILTPTRELAFQIADQFAVIGKVMNLRH 103
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
IVGGM Q + L +P +VV TPGRL + + + L F VLDEADR++
Sbjct: 104 CVIVGGMDMVVQGKDLARKPHIVVATPGRLADHLESCNTF--NFNKLRFLVLDEADRLL- 160
Query: 354 NGHFRE-LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
GHF E +++I LP K+RQ L FSATI
Sbjct: 161 GGHFDEQIKTIFQALP------------------------KERQNLFFSATI 188
>gi|393218427|gb|EJD03915.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 782
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 128/236 (54%), Gaps = 42/236 (17%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ + L L+K++ LGF PTPIQ A IP A GKD++G A TGSGKT AF +P++
Sbjct: 186 SFTTMSLSRPLLKALTALGFSTPTPIQVATIPVALL-GKDVVGNAVTGSGKTAAFMIPVL 244
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+RL M E+G+ K +R +++ PTREL +Q D K+++ ++VR+
Sbjct: 245 ERL---------MYRERGKN------KAAVRCVVLVPTRELGVQCVDVAKKLSAFMDVRI 289
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
IVGG+S + QE L+ RP++V+ TPGRL + + L TL +LDEADRM+
Sbjct: 290 SLIVGGLSLKSQEAELRTRPDIVIATPGRLIDHLRNSPSF--GLETLDVLILDEADRMLS 347
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+G EL+ II Q C T RQT++FSAT+ D
Sbjct: 348 DGFADELKEII-----------------QACPT-------SRQTMLFSATMTDDVD 379
>gi|365156794|ref|ZP_09353090.1| hypothetical protein HMPREF1015_01991 [Bacillus smithii 7_3_47FAA]
gi|363626851|gb|EHL77816.1| hypothetical protein HMPREF1015_01991 [Bacillus smithii 7_3_47FAA]
Length = 473
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 131/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KSI +LGF+E TPIQ A IP + GKD+IG A+TG+GKT AFG+P+M+
Sbjct: 4 FVELGLSPALLKSIDQLGFEEATPIQAATIPKSL-DGKDLIGQAQTGTGKTAAFGIPLME 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + H++ +II PTRELA+QV++ L ++ VR++
Sbjct: 63 KIDTKNH--------------------HIQGMIIAPTRELAIQVSEELYKIGYHKRVRIL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG ++Q R LK +P ++VGTPGR+ + ++ L LHTL VLDEAD M+
Sbjct: 103 AVYGGQDIQRQIRALKKQPHVIVGTPGRILDHINRQTLKLDHLHTL---VLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++++I+ +P K+RQTL+FSAT+
Sbjct: 160 GFIQDIETILSHMP------------------------KERQTLLFSATM 185
>gi|198425972|ref|XP_002127372.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
[Ciona intestinalis]
Length = 790
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 144/237 (60%), Gaps = 17/237 (7%)
Query: 175 WNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
W E L P +++ I+R+G+K+PTPIQ+ IP +DIIG AETGSGKT AF +P++
Sbjct: 363 WKECGDLPPEIVEVIHRIGYKDPTPIQRQAIPIG-FLNRDIIGVAETGSGKTAAFLIPLL 421
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ K+ E+ E+A+K P ALI+ PTRELA Q+ + + K + +R
Sbjct: 422 AWITS----LPKI--ERLEDADK-GP----YALILAPTRELAQQIEEETIKFGKELGIRT 470
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V ++GG+S E Q L+ E+V+ TPGRL +++ E + L ++ VLDEADRMI+
Sbjct: 471 VAVIGGLSREDQGFKLRMGCEIVIATPGRLIDVL---ENRYIVLSQCTYVVLDEADRMID 527
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIALSAD 409
G ++Q I+D +P+TN + +S + + + + L + K RQT++F+AT+ ++ +
Sbjct: 528 MGFEPDVQKILDHMPVTNQKPDDESMEDKIIMKSNFLTKHKYRQTVMFTATMPVAVE 584
>gi|91084021|ref|XP_975350.1| PREDICTED: similar to pre-mRNA-splicing ATP-dependent RNA helicase
PRP28 [Tribolium castaneum]
gi|270008001|gb|EFA04449.1| hypothetical protein TcasGA2_TC014753 [Tribolium castaneum]
Length = 762
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 148/232 (63%), Gaps = 16/232 (6%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E + L++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKTLAF +P++
Sbjct: 337 SWKESGIQKELLEIIDKVGYKEPTPIQRQAIPIGM-QNRDIIGVAETGSGKTLAFLIPLL 395
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ + K+ E+ E+A++ P A+I+ PTRELA Q+ + + + + +R
Sbjct: 396 SWI----QSLPKI--ERTEDADQ-GPY----AIILAPTRELAQQIEEETVKFGQPLGIRT 444
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ V+DEADRMI+
Sbjct: 445 VVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVMDEADRMID 501
Query: 354 NGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN + ++E ++ + + ++K RQT++F+AT+
Sbjct: 502 LGFEADVQKILEYMPVTNLKPDSEEAEDSKIILANYNSKKKYRQTVMFTATM 553
>gi|193641157|ref|XP_001946607.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Acyrthosiphon pisum]
Length = 721
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 142/231 (61%), Gaps = 16/231 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E + +M+ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA+ +P
Sbjct: 294 WKESTIKSEIMEIIEKVGYKEPTPIQRQAIPIG-FQNRDIIGVAETGSGKTLAYLIP--- 349
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L+E + KM E+ + Y+ +I+ PTRELA Q+ + + + + +R V
Sbjct: 350 -LIEWIQSLPKMEREEDVDQGPYS-------IILAPTRELAQQIEEETLKFGQPLGIRTV 401
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 402 VVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMIDM 458
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 404
G ++Q I++ +P+TN + + + ++ + + +KK RQT++F+AT+
Sbjct: 459 GFEPDVQKILEYMPVTNLKPDNEDAEDESKLLANYYTKKKYRQTVMFTATM 509
>gi|109084685|ref|XP_001097132.1| PREDICTED: ATP-dependent RNA helicase DDX24 isoform 5 [Macaca
mulatta]
Length = 856
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 125/229 (54%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+
Sbjct: 360 DKEQIGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGXXXXX 418
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 419 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 478
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 479 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 519
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 520 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 566
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAI 247
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 248 PVIHAVLQ 255
>gi|30683736|ref|NP_193396.3| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
gi|75338927|sp|Q9ZRZ8.1|RH28_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|3776027|emb|CAA09214.1| RNA helicase [Arabidopsis thaliana]
gi|110736657|dbj|BAF00292.1| RNA helicase like protein [Arabidopsis thaliana]
gi|332658378|gb|AEE83778.1| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
Length = 789
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 131/239 (54%), Gaps = 48/239 (20%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
+S D + EL L L+++ LG+K+PTPIQ ACIP A G+D+ +A TGSGKT A
Sbjct: 162 VSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLAL-TGRDLCASAITGSGKTAA 220
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKEV 285
F LP ++RLL + PK R LI+TPTRELA+Q+ ++ +
Sbjct: 221 FALPTLERLL-------------------FRPKRVFATRVLILTPTRELAVQIHSMIQNL 261
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A+ +++ IVGG+S +QE +L++ P++VV TPGR+ + + V+L L+ +L
Sbjct: 262 AQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLIL 319
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADR+++ G E+ ++ + P K+RQT++FSAT+
Sbjct: 320 DEADRLLQTGFATEITELVRLCP------------------------KRRQTMLFSATM 354
>gi|354584019|ref|ZP_09002916.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
gi|353197281|gb|EHB62774.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
Length = 490
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 133/230 (57%), Gaps = 42/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L + P+++K++ + +K PTPIQ IPA G+D++G A+TG+GKT AF +P++Q
Sbjct: 3 FQDLNISPIILKALAKENYKTPTPIQAQAIPAVL-AGRDLLGCAQTGTGKTAAFSVPMIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L E+ K G +RAL+++PTRELALQ++D++K ++ +R
Sbjct: 62 LLNEQPPKPGM--------------GRRIRALVLSPTRELALQISDNVKAYSQFTKLRST 107
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG+S + QER L+ ++++ TPGRL +L++ +KH V+L + VLDEADRM++
Sbjct: 108 AIVGGVSQKTQERALQQGADILIATPGRLIDLIN--QKH-VDLQHVEILVLDEADRMLDM 164
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II +P K+QTL FSAT+
Sbjct: 165 GFIHDVKRIIAKMP------------------------SKKQTLFFSATM 190
>gi|313885567|ref|ZP_07819317.1| DEAD-box ATP-dependent RNA helicase CshA [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619297|gb|EFR30736.1| DEAD-box ATP-dependent RNA helicase CshA [Eremococcus coleocola
ACS-139-V-Col8]
Length = 526
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 133/235 (56%), Gaps = 49/235 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+++L L L++++ LGF+EPTPIQ+ IP QG+D++G A+TG+GKT AFGLP++Q
Sbjct: 3 FSDLNLKTELIETLDELGFEEPTPIQQQAIPFVL-QGRDLVGQAQTGTGKTAAFGLPMLQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
G + + A L+ALII PTRELA+QV D L ++KG+ +V
Sbjct: 62 ----------------GLDTDHRA----LQALIIAPTRELAIQVHDELYSLSKGLKTKVY 101
Query: 295 PIVGGMSTEKQ-ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG S KQ +R+ K +P+++VGTPGRL +LM + +++ L ++DEAD M+
Sbjct: 102 AVYGGYSIGKQIDRIQKLKPQVIVGTPGRLLDLM---RRQIIDTSYLKTLIMDEADEMLN 158
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 408
G ++++I++ P + RQTL+FSAT+ S
Sbjct: 159 MGFIEDIKAIVEQTPSS------------------------RQTLMFSATMPKSV 189
>gi|412987541|emb|CCO20376.1| predicted protein [Bathycoccus prasinos]
Length = 843
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 131/249 (52%), Gaps = 61/249 (24%)
Query: 166 AEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
A+ T F A +N+L L L ++ +LG+ PTPIQ A IP A G+D+ G A+TGSG
Sbjct: 201 AKDGTTFSAQCFNDLHLSRPLCRACEKLGYATPTPIQAAIIPIAL-TGRDVCGRAQTGSG 259
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRAL---IITPTRELALQVTD 280
KT AF LP+++R+L + PK + A+ I+ PTRELA+Q
Sbjct: 260 KTAAFALPLLERML-------------------HRPKNAVSAIHVVIMVPTRELAVQCAQ 300
Query: 281 HLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
++ + + NV+V IVGG+S E+Q L+ RPE+VV TPGRL + H+ H+
Sbjct: 301 MIQRLGEYTNVQVATIVGGLSMERQAAALRQRPEIVVATPGRLID-------HVRNTHSF 353
Query: 341 SF-----FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
F VLDEADR++E G E++ I+ +P ++R
Sbjct: 354 GFEDVAAVVLDEADRLLEMGFLEEIKEIVRNMP------------------------RQR 389
Query: 396 QTLVFSATI 404
QTL+FSAT+
Sbjct: 390 QTLLFSATL 398
>gi|290968757|ref|ZP_06560294.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
genomosp. type_1 str. 28L]
gi|335049114|ref|ZP_08542124.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
199-6]
gi|290781053|gb|EFD93644.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
genomosp. type_1 str. 28L]
gi|333764226|gb|EGL41626.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
199-6]
Length = 520
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 130/233 (55%), Gaps = 46/233 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
+ + L++ ++++++ +GF+EPTPIQ IP A QG D+IG A+TG+GKT AFG+P
Sbjct: 2 LEKFQNLKISEVILQALNAMGFEEPTPIQAESIPVAL-QGADMIGQAQTGTGKTAAFGIP 60
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
+++++L K P ++ ++++PTRELA+QV + L +A+ +
Sbjct: 61 VLEKIL------------------KNEPTQSIQTVVLSPTRELAMQVAEELNHLAQCTTI 102
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ +PI GG E+Q R L+ P+++V TPGRL + M G L ++HT+ VLDEAD M
Sbjct: 103 QALPIYGGQDMERQLRRLRKHPQIIVATPGRLMDHMKRGTIDLSDIHTI---VLDEADEM 159
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++ G ++ +I+ P T RQTL+FSAT+
Sbjct: 160 LDMGFIDDINTIMSATPDT------------------------RQTLLFSATM 188
>gi|410962873|ref|XP_003987993.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Felis catus]
Length = 856
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 22/229 (9%)
Query: 237 LEEREKAGKMLEEKGEEAE-KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
L+E + G E G+ A K PK L L++TPTRELA+QV H+ VAK ++
Sbjct: 355 LDEEQTGGLKQELGGKTATCKAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAI 414
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 415 LVGGMSTQKQQRMLNRQPEIVIATPGRLWELIKEKHPHLSNLKQLRCLVVDEADRMVEKG 474
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML S KRQTL+FSAT+ L ++
Sbjct: 475 HFAELSQLLEML-------------------SDSQYNPKRQTLIFSATLTLVHQAPARIL 515
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 516 HK--KHTKKIDKTAKLDLLVQKIGMRGKPKVIDLTRNEATVETLTETKI 562
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
T+ P A+ + + + AW +L + +++++ LGF PTPIQ + A
Sbjct: 167 TIPKVPKKAKTWVPETHDQKADVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIR 226
Query: 210 QGKDIIGAAETGSGKTLAFGLPIMQRLLEEREK---------AGKMLEEKGEEA 254
DI+GAAETGSGKTLAF +P++ +L+ + K G + E G EA
Sbjct: 227 DKLDILGAAETGSGKTLAFAIPMIHAVLQWQVKKKPTPTLGNPGALPSEAGTEA 280
>gi|284048361|ref|YP_003398700.1| DEAD/DEAH box helicase [Acidaminococcus fermentans DSM 20731]
gi|283952582|gb|ADB47385.1| DEAD/DEAH box helicase domain protein [Acidaminococcus fermentans
DSM 20731]
Length = 544
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 139/241 (57%), Gaps = 48/241 (19%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
+ AE E ++ +L L ++ ++ +GF+EP+PIQK IP A +G+D+IG A+TG+G
Sbjct: 10 TTAESKPEITSFEDLNLDRKILAALKEMGFEEPSPIQKGAIPMAL-EGEDLIGQAQTGTG 68
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
KT AFG+PI+Q++ E+++ H++AL+++PTREL +QV D +
Sbjct: 69 KTAAFGIPIIQKI-NEKDR-------------------HIQALVMSPTRELCIQVADEIS 108
Query: 284 EVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 343
++ K +RV+P+ GG E+Q R LK ++V+GTPGRL + + G ++L ++F
Sbjct: 109 KIGKTKRIRVLPVYGGQPIERQIRSLKRGIQVVIGTPGRLLDHIRRGT---IDLEYVNFL 165
Query: 344 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 403
VLDEAD M++ G ++++II +P +RQT++FSAT
Sbjct: 166 VLDEADEMLDMGFVDDMENIIKNVP------------------------PERQTMLFSAT 201
Query: 404 I 404
+
Sbjct: 202 M 202
>gi|344273652|ref|XP_003408633.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Loxodonta
africana]
Length = 858
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 118/218 (54%), Gaps = 22/218 (10%)
Query: 248 EEKGEEAE-KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQE 306
E GE A K P+ L L++TPTRELA+QV H+ VAK +R +VGGMST+KQE
Sbjct: 371 ESNGEIATCKEHPRHPLLGLVLTPTRELAVQVKQHIDAVAKFTGIRTAILVGGMSTQKQE 430
Query: 307 RLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 366
R+L +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 431 RMLNRQPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVVDEADRMVEKGHFDELSQLLEM 490
Query: 367 LPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVN 426
L S KRQTLVFSAT+ L ++ H K + ++
Sbjct: 491 L-------------------SDSQYNPKRQTLVFSATLTLVHQAPTRILHK--KHTKKMD 529
Query: 427 GLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
++ L ++ GMR ++DLT L E+ I
Sbjct: 530 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLIETKI 567
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 186 DVSAWKNLFVPEGVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 245
Query: 231 PIMQRLLEEREK 242
P++ +L+ ++K
Sbjct: 246 PMIHAVLQWQKK 257
>gi|297298507|ref|XP_002805221.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Macaca mulatta]
Length = 770
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 125/229 (54%), Gaps = 25/229 (10%)
Query: 239 EREKAGKM---LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVP 295
++E+ G + L++K + Y PK L L++TPTRELA+QV H+ VA+
Sbjct: 274 DKEQIGNLKQELDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGXXXXX 332
Query: 296 IVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
+VGGMST+KQ+R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E G
Sbjct: 333 LVGGMSTQKQQRMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKG 392
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 415
HF EL +++ML N+ Q KRQTLVFSAT+ L ++
Sbjct: 393 HFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQAPARIL 433
Query: 416 HGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
H K + ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 434 HK--KHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKI 480
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLE 238
DI+GAAETGSGKTLAF +P++ +L+
Sbjct: 144 DILGAAETGSGKTLAFAIPVIHAVLQ 169
>gi|346466927|gb|AEO33308.1| hypothetical protein [Amblyomma maculatum]
Length = 586
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 141/231 (61%), Gaps = 16/231 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+E L ++ I LG+K+PTPIQ+ IP Q +DIIG AETGSGKTLAF LP++
Sbjct: 160 WSESGLPSSILDIIKELGYKDPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLAFLLPLLV 218
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K+ E+ E+A++ P A+I+ PTRELA Q+ + + AK + +R V
Sbjct: 219 WITS----LPKI--ERQEDADQ-GPY----AIIMAPTRELAQQIDEETTKFAKMLEIRSV 267
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG+S E+Q L+ E+V+ TPGRL +++ E + L ++ VLDEADRMI+
Sbjct: 268 AVIGGLSREEQGFRLRLGCEIVIATPGRLIDVL---ENRYLVLSRCTYIVLDEADRMIDM 324
Query: 355 GHFRELQSIIDMLPMTNGS-NEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E+Q I+D +P+TN + ++E + + + + K RQT++F+AT+
Sbjct: 325 GFEGEVQKILDYMPVTNQKPDTDEAEDEEKLLANFASKHKYRQTVMFTATM 375
>gi|323485816|ref|ZP_08091151.1| ATP-dependent RNA helicase RhlE [Clostridium symbiosum WAL-14163]
gi|323400804|gb|EGA93167.1| ATP-dependent RNA helicase RhlE [Clostridium symbiosum WAL-14163]
Length = 458
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 132/230 (57%), Gaps = 42/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L PLL+K++ G+ P+PIQ+ IP G+D++G A+TG+GKT AF LPI+Q
Sbjct: 15 FKDLQLSPLLLKALEEKGYVSPSPIQEKAIPHVL-AGRDVLGCAQTGTGKTAAFALPIIQ 73
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L++ EK KY+ K +R+LI+TPTR+LALQ+ ++ KE +VR
Sbjct: 74 NLMKPSEK-------------KYS-KRVIRSLILTPTRKLALQIAENFKEYGSRTSVRCA 119
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S Q L+ +++V TPGRL +L+ G V+L + FVLDEADRM++
Sbjct: 120 VIFGGVSANPQIEELRRGIDILVATPGRLNDLVGQG---FVDLAYVEIFVLDEADRMLDM 176
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II +LP+ ++QTL+FSAT+
Sbjct: 177 GFIHDVKKIISLLPV------------------------RKQTLLFSATM 202
>gi|257091933|ref|YP_003165574.1| DEAD/DEAH box helicase domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044457|gb|ACV33645.1| DEAD/DEAH box helicase domain protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 474
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 135/241 (56%), Gaps = 43/241 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E+ LHP ++K++ G+ EPTP+Q+ IP A +G+D++ +++TGSGKT AF LP +
Sbjct: 3 FAEIGLHPAILKALTDSGYSEPTPVQQQAIPPAI-EGRDLMVSSQTGSGKTAAFMLPALH 61
Query: 235 RL-LEEREKAGKMLEEKGEEAEKYAPKGH---------LRALIITPTRELALQVTDHLKE 284
R L+ER A E+G P+GH R L++TPTRELALQVT ++
Sbjct: 62 RFALQERPAAVPRPSERGAAR----PRGHDRQRFQAAQPRMLVLTPTRELALQVTAATEK 117
Query: 285 VAKGIN-VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 343
+ ++ VR V I+GGM KQ LL PE++V TPGRL + MS G+ ++ L
Sbjct: 118 YGRQLHHVRAVAILGGMPYPKQMELLGRNPEILVATPGRLIDHMSSGK---IDFSQLQIL 174
Query: 344 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 403
VLDEADRM++ G +++ I+ P GS RQTL+FSAT
Sbjct: 175 VLDEADRMLDMGFIEDIERIVAATP---GS---------------------RQTLLFSAT 210
Query: 404 I 404
+
Sbjct: 211 L 211
>gi|261404961|ref|YP_003241202.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261281424|gb|ACX63395.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. Y412MC10]
Length = 506
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 132/230 (57%), Gaps = 42/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ L + P+++K++ + +K PTPIQ IPA G+D++G A+TG+GKT AF +P++Q
Sbjct: 3 FENLNISPVILKALAKENYKAPTPIQAQAIPAVL-AGRDLLGCAQTGTGKTAAFSVPMIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L ++ K G +RAL+++PTRELALQ++D++K ++ +R
Sbjct: 62 LLNQQPPKPGM--------------GRRIRALVLSPTRELALQISDNVKAYSQFTKLRST 107
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG+S + QER L+ ++++ TPGRL +LM+ +KH V+L + VLDEADRM++
Sbjct: 108 AIVGGVSQKTQERALQQGADILIATPGRLLDLMN--QKH-VDLQHVEILVLDEADRMLDM 164
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II +P K+QTL FSAT+
Sbjct: 165 GFIHDVKRIIAKMP------------------------SKKQTLFFSATM 190
>gi|310641357|ref|YP_003946115.1| DEAD/DEAH box helicase [Paenibacillus polymyxa SC2]
gi|386040399|ref|YP_005959353.1| DEAD-box ATP-dependent RNA helicase ydbR [Paenibacillus polymyxa
M1]
gi|309246307|gb|ADO55874.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
polymyxa SC2]
gi|343096437|emb|CCC84646.1| DEAD-box ATP-dependent RNA helicase ydbR [Paenibacillus polymyxa
M1]
Length = 525
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 142/254 (55%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E L P ++++I LGF+E TPIQ IP A QGKD+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQSKSIPIAL-QGKDMIGQAQTGTGKTAAFGIPMIN 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + EK +RALI+ PTRELA+QV + ++++++ +R +
Sbjct: 63 KISKNDEK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRTL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 103 PIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 160 GFMEDIQSILKQVP------------------------DERQTMLFSATMPPNIKRLAEQ 195
Query: 410 FRKKLKHGSLKLKQ 423
F K +H S+ KQ
Sbjct: 196 FLKDPEHVSVIPKQ 209
>gi|432096748|gb|ELK27327.1| ATP-dependent RNA helicase DDX24 [Myotis davidii]
Length = 790
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 21/209 (10%)
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 315
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+
Sbjct: 367 KSHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLHRQPEI 426
Query: 316 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 375
V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 427 VIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML-------- 478
Query: 376 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 435
S KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 479 -----------SDSQYNPKRQTLVFSATLTLVHQAPARVLHK--KHTKKIDKTAKLDILM 525
Query: 436 ERAGMRANVAIVDLTNVSVLANKLEESFI 464
++ GMR ++DLT L E+ I
Sbjct: 526 QKIGMRGKPKVIDLTRNEATVETLTETKI 554
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPRPVLRALSALGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 231 PIMQRLLEEREK 242
P++ +L+ + K
Sbjct: 249 PMIHSVLQWQVK 260
>gi|222423183|dbj|BAH19569.1| AT4G16630 [Arabidopsis thaliana]
Length = 686
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 131/239 (54%), Gaps = 48/239 (20%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
+S D + EL L L+++ LG+K+PTPIQ ACIP A G+D+ +A TGSGKT A
Sbjct: 162 VSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLAL-TGRDLCASAITGSGKTAA 220
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKEV 285
F LP ++RLL + PK R LI+TPTRELA+Q+ ++ +
Sbjct: 221 FALPTLERLL-------------------FRPKRVFATRVLILTPTRELAVQIHSMIQNL 261
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A+ +++ IVGG+S +QE +L++ P++VV TPGR+ + + V+L L+ +L
Sbjct: 262 AQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLIL 319
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADR+++ G E+ ++ + P K+RQT++FSAT+
Sbjct: 320 DEADRLLQTGFATEITELVRLCP------------------------KRRQTMLFSATM 354
>gi|403218070|emb|CCK72562.1| hypothetical protein KNAG_0K01980 [Kazachstania naganishii CBS
8797]
Length = 721
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 157/313 (50%), Gaps = 44/313 (14%)
Query: 163 VSEAEISTEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETG 221
V+ +E+ E W L ++ + +LG+ +PT IQ IP A +G DI+G A TG
Sbjct: 133 VNFSEVEVELPDWQALGDFSMTTLQGLSKLGYTKPTEIQSKTIPLAL-EGHDIMGKASTG 191
Query: 222 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 281
SGKTLA+G+PI++ L++ ++ A + ALI TPTRELA QVT H
Sbjct: 192 SGKTLAYGIPILENLIKGKDSARPV------------------ALIFTPTRELASQVTSH 233
Query: 282 LKEVAKGI-----NVRVVPIVGGMSTEKQERLLK--ARPELVVGTPGRLWELMSGGEKHL 334
L + + I ++ + GG+S +KQER+LK ++++ TPGR EL+ +
Sbjct: 234 LTNLGESIFTGRNKFAIMSLTGGLSIQKQERVLKYDGSGQIIIATPGRFLELLEKRSDLV 293
Query: 335 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 394
+ VLDEADR++++GHF E I+ +L EG +R
Sbjct: 294 ARFAQIETLVLDEADRLLQDGHFDEFTKILKLLSQARREKEG--------------KRSH 339
Query: 395 RQTLVFSATIALSADFRKKLKHGS-LKLKQSVNGLNSI-ETLSERAGMRANVAIVDLTNV 452
QTL+FSAT +L F K +G LK+S N L + + L + + I+D
Sbjct: 340 WQTLIFSATFSLDL-FNKLASNGQGHTLKESDNELEEVLKQLMTKIHFKERPTIIDANPF 398
Query: 453 SVLANKLEESFIE 465
+ +++E+ IE
Sbjct: 399 DKVNMQVKEALIE 411
>gi|447911698|ref|YP_007393110.1| Cold-shock DEAD-box protein A [Enterococcus faecium NRRL B-2354]
gi|445187407|gb|AGE29049.1| Cold-shock DEAD-box protein A [Enterococcus faecium NRRL B-2354]
Length = 503
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 135/259 (52%), Gaps = 53/259 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +R++ L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRQE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQSVNGL 428
F K H +K K+ L
Sbjct: 195 FMKNPHHVKIKAKEMTADL 213
>gi|228474931|ref|ZP_04059660.1| cold-shock DEAD box protein A [Staphylococcus hominis SK119]
gi|314935968|ref|ZP_07843318.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
hominis subsp. hominis C80]
gi|418618997|ref|ZP_13181840.1| DEAD/DEAH box helicase [Staphylococcus hominis VCU122]
gi|228271163|gb|EEK12543.1| cold-shock DEAD box protein A [Staphylococcus hominis SK119]
gi|313655974|gb|EFS19716.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
hominis subsp. hominis C80]
gi|374825858|gb|EHR89777.1| DEAD/DEAH box helicase [Staphylococcus hominis VCU122]
Length = 503
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 132/225 (58%), Gaps = 35/225 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + +K++ +GFKEPTPIQK IP +GKDI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVKTLEEMGFKEPTPIQKESIPYTL-EGKDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K ++ALI+ PTRELA+QV + L+E ++G N++VV
Sbjct: 62 --------------------EKVVGKSGVQALILAPTRELAMQVAEQLREFSRGQNIQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM ++Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 399
G +++ I+D +P +EQ QT + S+ K QTLV
Sbjct: 159 GFIDDMRFIMDKIP---------AEQRQTML-FSATMPKAIQTLV 193
>gi|329121361|ref|ZP_08249987.1| RNA helicase DeaD [Dialister micraerophilus DSM 19965]
gi|327469770|gb|EGF15236.1| RNA helicase DeaD [Dialister micraerophilus DSM 19965]
Length = 497
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 131/233 (56%), Gaps = 48/233 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
++ + EL L +MK++ +GF+EP+PIQK +P A QGKD+IG A+TG+GKT AFG+P
Sbjct: 8 YETFKELGLSEEIMKAVADMGFEEPSPIQKEAVPIAM-QGKDLIGQAQTGTGKTAAFGIP 66
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
I+QR+ + K P+ A++++PTRELA+Q + + +A+ +N+
Sbjct: 67 ILQRI----------------DTSKPGPQ----AIVLSPTRELAIQSAEEINHLAQYMNI 106
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ +PI GG E+Q R LK + ++V TPGRL + M ++ ++L + VLDE D M
Sbjct: 107 KTIPIYGGQDIERQFRALKKKTNIIVATPGRLMDHM---KRKTIDLSNVQIAVLDEGDEM 163
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++ G ++++I+ P K+RQTL FSAT+
Sbjct: 164 VDMGFIDDIRTIMAATP------------------------KERQTLFFSATM 192
>gi|342320500|gb|EGU12440.1| ATP-dependent RNA helicase MAK5 [Rhodotorula glutinis ATCC 204091]
Length = 871
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 185/372 (49%), Gaps = 60/372 (16%)
Query: 152 SNGPDDAEEELVSEA--EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACI----- 204
SNG A EE E ++ E AW+ + L L +++ L F +PT IQ+ +
Sbjct: 199 SNG--GAVEEAADEPPFDVEAELPAWSHIPLANPLYRALAELKFTKPTEIQEKALLVGED 256
Query: 205 -----------------PAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKML 247
A A + D++G A+TGSGKTLA+GLPI+ +L + +
Sbjct: 257 AKAQAEGEEEQEKSAFDTAPAGREHDVVGIAQTGSGKTLAYGLPILSHILSQPSPSSSPS 316
Query: 248 EEKGEEAEKYAPKGHLRALIITPTRELALQV-----------------TDHLKEVA---- 286
+ + E P L ALI+ PTRELALQV + ++VA
Sbjct: 317 DSDSDADEPSLPSTRLAALILCPTRELALQVRTSLSSLSVRSLPLRTPSPETEKVAPEDP 376
Query: 287 ----KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 342
+G V+VV + GGMS EKQ+R L+ ++VV TPGRLW+L+ + + E+ + F
Sbjct: 377 RKRKQGRLVQVVALTGGMSVEKQKRQLERGADIVVATPGRLWDLIGESDMLVQEIKNIKF 436
Query: 343 FVLDEADRMIENGHFRELQSIIDMLPMTNGS-NEGQSEQTQTCVT----VSSLQ-RKKRQ 396
V+DEADRMIENGHF EL+SI+ + + ++G + + V V++L R +
Sbjct: 437 LVIDEADRMIENGHFAELESIVRLTRREQATPDDGFVDDFDSAVASRTNVTTLPCRPDMR 496
Query: 397 TLVFSATIALSADFRKKLKHGSLK-LKQSVNG-LNSIETLSERAGMR-ANVAIVDLTNVS 453
T VFSAT++ K K G K + ++V G + S++ L E R + I+DL+
Sbjct: 497 TFVFSATMSKELQLNLKRKGGPKKFVPKAVEGEMTSLDDLLELLDFRDPDPEIIDLSPEH 556
Query: 454 VLANKLEESFIE 465
L L+E +E
Sbjct: 557 GLVETLKECKVE 568
>gi|227206264|dbj|BAH57187.1| AT4G16630 [Arabidopsis thaliana]
Length = 617
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 131/239 (54%), Gaps = 48/239 (20%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
+S D + EL L L+++ LG+K+PTPIQ ACIP A G+D+ +A TGSGKT A
Sbjct: 100 VSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLAL-TGRDLCASAITGSGKTAA 158
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKEV 285
F LP ++RLL + PK R LI+TPTRELA+Q+ ++ +
Sbjct: 159 FALPTLERLL-------------------FRPKRVFATRVLILTPTRELAVQIHSMIQNL 199
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A+ +++ IVGG+S +QE +L++ P++VV TPGR+ + + V+L L+ +L
Sbjct: 200 AQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLIL 257
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADR+++ G E+ ++ + P K+RQT++FSAT+
Sbjct: 258 DEADRLLQTGFATEITELVRLCP------------------------KRRQTMLFSATM 292
>gi|375308018|ref|ZP_09773305.1| dead/deah box helicase domain-containing protein [Paenibacillus sp.
Aloe-11]
gi|375080349|gb|EHS58570.1| dead/deah box helicase domain-containing protein [Paenibacillus sp.
Aloe-11]
Length = 526
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 141/254 (55%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E L P ++++I LGF+E TPIQ IP A QGKD+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQAKSIPIAL-QGKDMIGQAQTGTGKTAAFGIPLIS 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ EK +RALI+ PTRELA+QV + ++++++ +R +
Sbjct: 63 KIARNDEK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRTL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 103 PIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 160 GFMEDIQSILKQVP------------------------DERQTMLFSATMPPNIKRLAEQ 195
Query: 410 FRKKLKHGSLKLKQ 423
F K +H S+ KQ
Sbjct: 196 FLKDPEHVSVIPKQ 209
>gi|390456495|ref|ZP_10242023.1| DEAD-box ATP-dependent RNA helicase ydbR [Paenibacillus peoriae
KCTC 3763]
Length = 526
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 142/254 (55%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E L P ++++I LGF+E TPIQ IP A QGKD+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQAISIPIAL-QGKDMIGQAQTGTGKTAAFGIPLIS 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + EK +RALI+ PTRELA+QV + ++++++ +R +
Sbjct: 63 KISKNDEK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRTL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 103 PIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 160 GFMEDIQSILKQVP------------------------DERQTMLFSATMPPNIKRLAEQ 195
Query: 410 FRKKLKHGSLKLKQ 423
F K +H S+ KQ
Sbjct: 196 FLKDPEHVSVIPKQ 209
>gi|156391217|ref|XP_001635665.1| predicted protein [Nematostella vectensis]
gi|156222761|gb|EDO43602.1| predicted protein [Nematostella vectensis]
Length = 777
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 140/230 (60%), Gaps = 15/230 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E ++ +++ + +LG+K+PTPIQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 352 WKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFAIPLLV 410
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ G E+ +A++ P ALI+ PTRELA Q+ + + + + + +R V
Sbjct: 411 WIM------GLPKIERDNDADQ-GPY----ALILAPTRELAQQIEEEILKFGRPLGIRTV 459
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG+S E Q L+ E+V+ TPGRL +++ ++LV L+ S+ V+DEADRMI+
Sbjct: 460 SVIGGLSREDQGFQLRLGVEIVIATPGRLIDVLEN--RYLV-LNRCSYIVMDEADRMIDM 516
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E+Q I++ LP++N + + + + + K RQT++F+AT+
Sbjct: 517 GFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMFTATM 566
>gi|348553728|ref|XP_003462678.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Cavia porcellus]
Length = 841
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 21/192 (10%)
Query: 259 PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVG 318
PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L PE+V+
Sbjct: 368 PKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRHPEIVIA 427
Query: 319 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQS 378
TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML N+ Q
Sbjct: 428 TPGRLWELVKEKHSHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML------NDSQY 481
Query: 379 EQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERA 438
KRQTLVFSAT+ L +L H K + ++ ++ L ++
Sbjct: 482 N-------------PKRQTLVFSATLTLVHQVPARLLHK--KHVKKIDKTAKLDLLMQKI 526
Query: 439 GMRANVAIVDLT 450
GMR ++DLT
Sbjct: 527 GMRGKPKVIDLT 538
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLVPAIRDRLDILGAAETGSGKTLAFAI 248
Query: 231 PIMQRLLEEREK 242
P++ +L+ +++
Sbjct: 249 PMIHAVLQWQKR 260
>gi|426248528|ref|XP_004018015.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Ovis aries]
Length = 852
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 139/266 (52%), Gaps = 33/266 (12%)
Query: 206 AAAHQGKDIIGAAETGSG-KTLAFGLPIMQRLLEEREK-----AGKMLEEKGEEAEKYAP 259
A + QG+D G + G G +L PI + ++ EK GK+ ++G P
Sbjct: 321 ACSDQGRD--GDVDAGEGPSSLMREKPIPNQEGDQVEKHDGEQTGKV--KRGLGGSAVPP 376
Query: 260 KGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGT 319
+ L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+V+ T
Sbjct: 377 RRPLLGLVLTPTRELAVQVKQHVDAVAKFTGIKTAILVGGMSTQKQQRMLNRQPEIVIAT 436
Query: 320 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSE 379
PGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 437 PGRLWELVKEKHPHLSNLQQLRCLVIDEADRMVEKGHFAELSQLLEML------------ 484
Query: 380 QTQTCVTVSSLQRK-KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERA 438
S Q KRQTLVFSAT+ L ++ H K + ++ ++ L ++
Sbjct: 485 --------SDCQYNPKRQTLVFSATLTLVHQAPARILHK--KHAKKIDKTAKLDLLMQKI 534
Query: 439 GMRANVAIVDLTNVSVLANKLEESFI 464
GMR ++DLT L E+ I
Sbjct: 535 GMRGKPKVIDLTRKEATVETLTETKI 560
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 231 PIMQRLL 237
P++ +L
Sbjct: 249 PMIDAVL 255
>gi|198474199|ref|XP_001356589.2| GA10248 [Drosophila pseudoobscura pseudoobscura]
gi|198138291|gb|EAL33653.2| GA10248 [Drosophila pseudoobscura pseudoobscura]
Length = 828
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 146/238 (61%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +WNE P ++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 395 IPNPIRSWNESGFPPEIIDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 453
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 454 FLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETIKFGQ 502
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 503 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 559
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + + + + + + +KK RQT++F+AT+
Sbjct: 560 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDENKLMENFYTKKKYRQTVMFTATM 617
>gi|257899462|ref|ZP_05679115.1| helicase [Enterococcus faecium Com15]
gi|293573030|ref|ZP_06683972.1| cold-shock deAd box protein a [Enterococcus faecium E980]
gi|430842364|ref|ZP_19460279.1| DEAD/DEAH box helicase [Enterococcus faecium E1007]
gi|431081588|ref|ZP_19495678.1| DEAD/DEAH box helicase [Enterococcus faecium E1604]
gi|431118220|ref|ZP_19498174.1| DEAD/DEAH box helicase [Enterococcus faecium E1613]
gi|431592214|ref|ZP_19521450.1| DEAD/DEAH box helicase [Enterococcus faecium E1861]
gi|431738949|ref|ZP_19527889.1| DEAD/DEAH box helicase [Enterococcus faecium E1972]
gi|431740772|ref|ZP_19529683.1| DEAD/DEAH box helicase [Enterococcus faecium E2039]
gi|257837374|gb|EEV62448.1| helicase [Enterococcus faecium Com15]
gi|291606932|gb|EFF36312.1| cold-shock deAd box protein a [Enterococcus faecium E980]
gi|430493445|gb|ELA69748.1| DEAD/DEAH box helicase [Enterococcus faecium E1007]
gi|430565520|gb|ELB04666.1| DEAD/DEAH box helicase [Enterococcus faecium E1604]
gi|430568177|gb|ELB07234.1| DEAD/DEAH box helicase [Enterococcus faecium E1613]
gi|430591839|gb|ELB29866.1| DEAD/DEAH box helicase [Enterococcus faecium E1861]
gi|430596492|gb|ELB34316.1| DEAD/DEAH box helicase [Enterococcus faecium E1972]
gi|430602855|gb|ELB40405.1| DEAD/DEAH box helicase [Enterococcus faecium E2039]
Length = 503
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 135/259 (52%), Gaps = 53/259 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P ++RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------EQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQSVNGL 428
F K H +K K+ L
Sbjct: 195 FMKSPHHVKIKAKEMTADL 213
>gi|257870943|ref|ZP_05650596.1| helicase [Enterococcus gallinarum EG2]
gi|357051322|ref|ZP_09112516.1| hypothetical protein HMPREF9478_02499 [Enterococcus saccharolyticus
30_1]
gi|257805107|gb|EEV33929.1| helicase [Enterococcus gallinarum EG2]
gi|355380144|gb|EHG27289.1| hypothetical protein HMPREF9478_02499 [Enterococcus saccharolyticus
30_1]
Length = 502
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 135/255 (52%), Gaps = 55/255 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L L+ S+ R GF+E TPIQ+A IP A QG+D+IG A+TG+GKT AFGLP++
Sbjct: 3 FKDLELSNELLTSVERAGFEEATPIQEATIPLAL-QGRDVIGQAQTGTGKTAAFGLPML- 60
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
EK P H L+ L+I PTRELA+Q + L + K +RV
Sbjct: 61 --------------------EKIDPANHQLQGLVIAPTRELAIQTQEELYRLGKDKKIRV 100
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVETLVLDEADEMLN 157
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 408
G +++ II +P ++RQTL+FSAT+ ++
Sbjct: 158 MGFLEDIEKIISQVP------------------------EERQTLLFSATMPPAIKSIGV 193
Query: 409 DFRKKLKHGSLKLKQ 423
F K +H +K K+
Sbjct: 194 KFMKNPEHVQIKAKE 208
>gi|431208676|ref|ZP_19500889.1| DEAD/DEAH box helicase [Enterococcus faecium E1620]
gi|430570682|gb|ELB09622.1| DEAD/DEAH box helicase [Enterococcus faecium E1620]
Length = 503
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 134/259 (51%), Gaps = 53/259 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQSVNGL 428
F K H +K K+ L
Sbjct: 195 FMKNPHHVKIKAKEMTADL 213
>gi|149737471|ref|XP_001498017.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Equus caballus]
Length = 857
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 21/209 (10%)
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 315
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+
Sbjct: 380 KAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRQPEI 439
Query: 316 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 375
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 440 VVATPGRLWELVKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 491
Query: 376 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 435
S KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 492 -----------SDSQYNPKRQTLVFSATLTLVHQAPARILHK--KHTKKIDKTAKLDLLM 538
Query: 436 ERAGMRANVAIVDLTNVSVLANKLEESFI 464
++ G+R ++DLT L E+ I
Sbjct: 539 QKIGLRGKPKVIDLTRNEATVETLTETKI 567
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
T GP A+ + + + AW +L + +++++ LGF PTPIQ + A
Sbjct: 167 TTPKGPKKAKTWMPEMRDQKADVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIR 226
Query: 210 QGKDIIGAAETGSGKTLAFGLPIMQRLLE 238
DI+GAAETGSGKTLAF +P++ +L+
Sbjct: 227 DKLDILGAAETGSGKTLAFAIPMIHAVLQ 255
>gi|345803790|ref|XP_537542.3| PREDICTED: ATP-dependent RNA helicase DDX24 [Canis lupus
familiaris]
Length = 852
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 115/209 (55%), Gaps = 21/209 (10%)
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 315
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+
Sbjct: 374 KVHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRQPEI 433
Query: 316 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 375
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 434 VVATPGRLWELIKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 485
Query: 376 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 435
G S+ KRQTL+FSAT+ L ++ H K + ++ ++
Sbjct: 486 GDSQYN-----------PKRQTLIFSATLTLVHQAPARILHK--KHTKKIDKTAKLDLFV 532
Query: 436 ERAGMRANVAIVDLTNVSVLANKLEESFI 464
++ GMR ++DLT L E+ I
Sbjct: 533 QKIGMRGKPKVIDLTRNEATVETLTETKI 561
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 188 DVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 247
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 248 PMIHTVLQ 255
>gi|260558407|ref|ZP_05830603.1| helicase [Enterococcus faecium C68]
gi|261207113|ref|ZP_05921802.1| helicase [Enterococcus faecium TC 6]
gi|289567232|ref|ZP_06447617.1| ATP-dependent RNA helicase exp9 [Enterococcus faecium D344SRF]
gi|293556891|ref|ZP_06675452.1| ATP-dependent RNA helicase [Enterococcus faecium E1039]
gi|293567807|ref|ZP_06679148.1| cold-shock deAd box protein a [Enterococcus faecium E1071]
gi|294615128|ref|ZP_06695014.1| Putative ATP-dependent RNA helicase [Enterococcus faecium E1636]
gi|294617803|ref|ZP_06697416.1| ATP-dependent RNA helicase [Enterococcus faecium E1679]
gi|406579294|ref|ZP_11054526.1| DEAD/DEAH box helicase [Enterococcus sp. GMD4E]
gi|406581588|ref|ZP_11056725.1| DEAD/DEAH box helicase [Enterococcus sp. GMD3E]
gi|406584027|ref|ZP_11059065.1| DEAD/DEAH box helicase [Enterococcus sp. GMD2E]
gi|406589825|ref|ZP_11064245.1| DEAD/DEAH box helicase [Enterococcus sp. GMD1E]
gi|410938072|ref|ZP_11369930.1| DEAD/DEAH box helicase [Enterococcus sp. GMD5E]
gi|424789110|ref|ZP_18215819.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
V689]
gi|424953765|ref|ZP_18368708.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R494]
gi|424962400|ref|ZP_18376756.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1986]
gi|424963599|ref|ZP_18377803.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1190]
gi|424970725|ref|ZP_18384213.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1139]
gi|424978089|ref|ZP_18391038.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1123]
gi|425038208|ref|ZP_18442830.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 513]
gi|425058609|ref|ZP_18461987.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 504]
gi|425060636|ref|ZP_18463922.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 503]
gi|427397059|ref|ZP_18889685.1| hypothetical protein HMPREF9307_01861 [Enterococcus durans
FB129-CNAB-4]
gi|430820898|ref|ZP_19439518.1| DEAD/DEAH box helicase [Enterococcus faecium E0045]
gi|430823396|ref|ZP_19441967.1| DEAD/DEAH box helicase [Enterococcus faecium E0120]
gi|430826317|ref|ZP_19444503.1| DEAD/DEAH box helicase [Enterococcus faecium E0164]
gi|430828899|ref|ZP_19447010.1| DEAD/DEAH box helicase [Enterococcus faecium E0269]
gi|430834757|ref|ZP_19452759.1| DEAD/DEAH box helicase [Enterococcus faecium E0679]
gi|430836494|ref|ZP_19454473.1| DEAD/DEAH box helicase [Enterococcus faecium E0680]
gi|430839412|ref|ZP_19457353.1| DEAD/DEAH box helicase [Enterococcus faecium E0688]
gi|430843175|ref|ZP_19461076.1| DEAD/DEAH box helicase [Enterococcus faecium E1050]
gi|430850821|ref|ZP_19468578.1| DEAD/DEAH box helicase [Enterococcus faecium E1185]
gi|430853175|ref|ZP_19470905.1| DEAD/DEAH box helicase [Enterococcus faecium E1258]
gi|430858894|ref|ZP_19476513.1| DEAD/DEAH box helicase [Enterococcus faecium E1552]
gi|430861435|ref|ZP_19478942.1| DEAD/DEAH box helicase [Enterococcus faecium E1573]
gi|430866428|ref|ZP_19481705.1| DEAD/DEAH box helicase [Enterococcus faecium E1574]
gi|430892938|ref|ZP_19484559.1| DEAD/DEAH box helicase [Enterococcus faecium E1575]
gi|430952632|ref|ZP_19486438.1| DEAD/DEAH box helicase [Enterococcus faecium E1576]
gi|431000766|ref|ZP_19488247.1| DEAD/DEAH box helicase [Enterococcus faecium E1578]
gi|431234137|ref|ZP_19502906.1| DEAD/DEAH box helicase [Enterococcus faecium E1622]
gi|431256501|ref|ZP_19504856.1| DEAD/DEAH box helicase [Enterococcus faecium E1623]
gi|431303424|ref|ZP_19508271.1| DEAD/DEAH box helicase [Enterococcus faecium E1626]
gi|431380394|ref|ZP_19510775.1| DEAD/DEAH box helicase [Enterococcus faecium E1627]
gi|431441111|ref|ZP_19513326.1| DEAD/DEAH box helicase [Enterococcus faecium E1630]
gi|431506774|ref|ZP_19515600.1| DEAD/DEAH box helicase [Enterococcus faecium E1634]
gi|431725207|ref|ZP_19525416.1| DEAD/DEAH box helicase [Enterococcus faecium E1904]
gi|431744090|ref|ZP_19532962.1| DEAD/DEAH box helicase [Enterococcus faecium E2071]
gi|431747114|ref|ZP_19535916.1| DEAD/DEAH box helicase [Enterococcus faecium E2134]
gi|431760196|ref|ZP_19548798.1| DEAD/DEAH box helicase [Enterococcus faecium E3346]
gi|431765027|ref|ZP_19553551.1| DEAD/DEAH box helicase [Enterococcus faecium E4215]
gi|260075581|gb|EEW63887.1| helicase [Enterococcus faecium C68]
gi|260078741|gb|EEW66443.1| helicase [Enterococcus faecium TC 6]
gi|289160980|gb|EFD08895.1| ATP-dependent RNA helicase exp9 [Enterococcus faecium D344SRF]
gi|291589392|gb|EFF21199.1| cold-shock deAd box protein a [Enterococcus faecium E1071]
gi|291592070|gb|EFF23693.1| Putative ATP-dependent RNA helicase [Enterococcus faecium E1636]
gi|291595943|gb|EFF27223.1| ATP-dependent RNA helicase [Enterococcus faecium E1679]
gi|291600975|gb|EFF31266.1| ATP-dependent RNA helicase [Enterococcus faecium E1039]
gi|402922578|gb|EJX42943.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
V689]
gi|402938304|gb|EJX57320.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R494]
gi|402940682|gb|EJX59477.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1986]
gi|402948694|gb|EJX66809.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1190]
gi|402960765|gb|EJX77866.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1139]
gi|402963120|gb|EJX80012.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1123]
gi|403019904|gb|EJY32478.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 513]
gi|403038013|gb|EJY49253.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 504]
gi|403042418|gb|EJY53373.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 503]
gi|404455599|gb|EKA02443.1| DEAD/DEAH box helicase [Enterococcus sp. GMD4E]
gi|404459354|gb|EKA05720.1| DEAD/DEAH box helicase [Enterococcus sp. GMD3E]
gi|404464924|gb|EKA10437.1| DEAD/DEAH box helicase [Enterococcus sp. GMD2E]
gi|404470265|gb|EKA14916.1| DEAD/DEAH box helicase [Enterococcus sp. GMD1E]
gi|410733711|gb|EKQ75634.1| DEAD/DEAH box helicase [Enterococcus sp. GMD5E]
gi|425722385|gb|EKU85280.1| hypothetical protein HMPREF9307_01861 [Enterococcus durans
FB129-CNAB-4]
gi|430439035|gb|ELA49418.1| DEAD/DEAH box helicase [Enterococcus faecium E0045]
gi|430442109|gb|ELA52157.1| DEAD/DEAH box helicase [Enterococcus faecium E0120]
gi|430445197|gb|ELA54971.1| DEAD/DEAH box helicase [Enterococcus faecium E0164]
gi|430482561|gb|ELA59676.1| DEAD/DEAH box helicase [Enterococcus faecium E0269]
gi|430484826|gb|ELA61773.1| DEAD/DEAH box helicase [Enterococcus faecium E0679]
gi|430488294|gb|ELA64976.1| DEAD/DEAH box helicase [Enterococcus faecium E0680]
gi|430490870|gb|ELA67366.1| DEAD/DEAH box helicase [Enterococcus faecium E0688]
gi|430497924|gb|ELA73941.1| DEAD/DEAH box helicase [Enterococcus faecium E1050]
gi|430535180|gb|ELA75603.1| DEAD/DEAH box helicase [Enterococcus faecium E1185]
gi|430540997|gb|ELA81174.1| DEAD/DEAH box helicase [Enterococcus faecium E1258]
gi|430544740|gb|ELA84762.1| DEAD/DEAH box helicase [Enterococcus faecium E1552]
gi|430549900|gb|ELA89710.1| DEAD/DEAH box helicase [Enterococcus faecium E1573]
gi|430551656|gb|ELA91407.1| DEAD/DEAH box helicase [Enterococcus faecium E1574]
gi|430555404|gb|ELA94942.1| DEAD/DEAH box helicase [Enterococcus faecium E1575]
gi|430557231|gb|ELA96699.1| DEAD/DEAH box helicase [Enterococcus faecium E1576]
gi|430562425|gb|ELB01657.1| DEAD/DEAH box helicase [Enterococcus faecium E1578]
gi|430573163|gb|ELB11993.1| DEAD/DEAH box helicase [Enterococcus faecium E1622]
gi|430577603|gb|ELB16190.1| DEAD/DEAH box helicase [Enterococcus faecium E1623]
gi|430580065|gb|ELB18545.1| DEAD/DEAH box helicase [Enterococcus faecium E1626]
gi|430582262|gb|ELB20689.1| DEAD/DEAH box helicase [Enterococcus faecium E1627]
gi|430586467|gb|ELB24719.1| DEAD/DEAH box helicase [Enterococcus faecium E1630]
gi|430587161|gb|ELB25394.1| DEAD/DEAH box helicase [Enterococcus faecium E1634]
gi|430595854|gb|ELB33732.1| DEAD/DEAH box helicase [Enterococcus faecium E1904]
gi|430605718|gb|ELB43100.1| DEAD/DEAH box helicase [Enterococcus faecium E2071]
gi|430607222|gb|ELB44549.1| DEAD/DEAH box helicase [Enterococcus faecium E2134]
gi|430624005|gb|ELB60656.1| DEAD/DEAH box helicase [Enterococcus faecium E3346]
gi|430629510|gb|ELB65910.1| DEAD/DEAH box helicase [Enterococcus faecium E4215]
Length = 503
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 134/259 (51%), Gaps = 53/259 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQSVNGL 428
F K H +K K+ L
Sbjct: 195 FMKNPHHVKIKAKEMTADL 213
>gi|257885750|ref|ZP_05665403.1| helicase [Enterococcus faecium 1,231,501]
gi|257821606|gb|EEV48736.1| helicase [Enterococcus faecium 1,231,501]
Length = 503
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 133/254 (52%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQ 423
F K H +K K+
Sbjct: 195 FMKNPHHVKIKAKE 208
>gi|74178110|dbj|BAE29843.1| unnamed protein product [Mus musculus]
gi|74220253|dbj|BAE31305.1| unnamed protein product [Mus musculus]
gi|74225346|dbj|BAE31603.1| unnamed protein product [Mus musculus]
Length = 857
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 120/212 (56%), Gaps = 23/212 (10%)
Query: 241 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 298
E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 364 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 423
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+D ADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDGADRMVEKGHFA 483
Query: 359 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 418
EL +++ML N+ Q + RQTLVFSAT+ L ++ H
Sbjct: 484 ELSQLLEML------NDSQYNPS-------------RQTLVFSATLTLVHQAPARILHK- 523
Query: 419 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
K + ++ + ++ L ++ GMR ++DLT
Sbjct: 524 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLT 554
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 191 DVSAWRDLFVPEAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 250
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 251 PMIHSVLQ 258
>gi|308068476|ref|YP_003870081.1| RNA helicase exp9 (Exported protein 9) [Paenibacillus polymyxa
E681]
gi|305857755|gb|ADM69543.1| Probable RNA helicase exp9 (Exported protein 9) [Paenibacillus
polymyxa E681]
Length = 529
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 141/254 (55%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E L P ++++I LGF+E TPIQ IP A QG+D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQSQSIPIAL-QGRDMIGQAQTGTGKTAAFGIPLIN 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ EK +RALI+ PTRELA+QV + ++++++ +R +
Sbjct: 63 KISRSDEK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRTL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 103 PIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 160 GFMEDIQSILKQVP------------------------DERQTMLFSATMPANIKRLAEQ 195
Query: 410 FRKKLKHGSLKLKQ 423
F K +H S+ KQ
Sbjct: 196 FLKNPEHVSVIPKQ 209
>gi|195388290|ref|XP_002052813.1| GJ17767 [Drosophila virilis]
gi|194149270|gb|EDW64968.1| GJ17767 [Drosophila virilis]
Length = 835
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 146/238 (61%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +WNE P +++ I +G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 402 IPNPIRSWNESGFPPEIIEIIDTVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 460
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 461 FLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETIKFGQ 509
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 510 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 566
Query: 348 ADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 567 ADRMIDMGFEPDVQKILEYMPVTNLKPDSEEAEDEKKLMENFYTKKKYRQTVMFTATM 624
>gi|223590136|sp|A5DF03.2|PRP28_PICGU RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|190345810|gb|EDK37756.2| hypothetical protein PGUG_01854 [Meyerozyma guilliermondii ATCC
6260]
Length = 575
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 133/238 (55%), Gaps = 18/238 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W E + L+ +I +LG+KEPTPIQ+A IP A +D++G AETGSGKTLA
Sbjct: 145 IPNPLRSWKESGIPTTLLNTIDQLGYKEPTPIQRAAIPTALGH-RDVVGIAETGSGKTLA 203
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ L +K +E K E + + L++ PTRELALQ++ K+ A
Sbjct: 204 FLIPLLS-YLSAIDKDYMEVEHKQE-----SNLNKVLGLVLAPTRELALQISKEAKKFAS 257
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ VV I+GG E+ + ++ +VV TPGR L+ EK L++L +DE
Sbjct: 258 VLGYNVVTIIGGHQYEETVKSVQDGAHIVVATPGR---LIDSAEKGLIDLSQCYHLTMDE 314
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
ADRMI+ G + LQSI+ LP T+ S G + + + K R TL+F+ATI+
Sbjct: 315 ADRMIDMGFEKALQSILSFLPSTSSSGFG--------LDSTIFKVKSRITLMFTATIS 364
>gi|332016384|gb|EGI57297.1| Putative ATP-dependent RNA helicase DDX49 [Acromyrmex echinatior]
Length = 461
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 142/275 (51%), Gaps = 51/275 (18%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
+ +S E +++L+L+ L+ +G K+PTPIQ+ CIP G+D IG A+TGSGKT
Sbjct: 4 SNMSKEIKHFSDLKLNSWLLAQCESMGLKKPTPIQQNCIPRIL-MGEDCIGCAKTGSGKT 62
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
LAF LPI+Q+L E+ P G + AL++TPTRELA Q+ D +
Sbjct: 63 LAFVLPILQKLCED-------------------PYG-IFALVLTPTRELAFQIADQFTAI 102
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
K IN++ IVGGM Q L RP +VV TPGRL + + + L + F VL
Sbjct: 103 GKAINLKKCVIVGGMDMMVQGLELSKRPHIVVATPGRLADHLDSCDTF--SLQKIKFLVL 160
Query: 346 DEADRMIENGHFR-ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADR++ GHF +L++I LP K++Q L FSAT+
Sbjct: 161 DEADRLL-GGHFDGQLKTIFAALP------------------------KQKQVLFFSATM 195
Query: 405 ALSADFRKKLKHGSLKLKQSVN--GLNSIETLSER 437
+ D K++ + Q + G+ +++ L +R
Sbjct: 196 TDTLDKVKQIASAEVFTWQEEDDFGIATVKELDQR 230
>gi|425055862|ref|ZP_18459326.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 505]
gi|403033019|gb|EJY44552.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 505]
Length = 503
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 134/259 (51%), Gaps = 53/259 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQSVNGL 428
F K H +K K+ L
Sbjct: 195 FMKSPHHVKIKAKEMTADL 213
>gi|69248308|ref|ZP_00604710.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Enterococcus faecium DO]
gi|257878842|ref|ZP_05658495.1| helicase [Enterococcus faecium 1,230,933]
gi|257881478|ref|ZP_05661131.1| helicase [Enterococcus faecium 1,231,502]
gi|257890700|ref|ZP_05670353.1| helicase [Enterococcus faecium 1,231,410]
gi|293560261|ref|ZP_06676758.1| cold-shock deAd box protein a [Enterococcus faecium E1162]
gi|294621795|ref|ZP_06700954.1| ATP-dependent RNA helicase [Enterococcus faecium U0317]
gi|314938932|ref|ZP_07846197.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a04]
gi|314943517|ref|ZP_07850284.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133C]
gi|314948188|ref|ZP_07851582.1| DEAD/DEAH box helicase [Enterococcus faecium TX0082]
gi|314951548|ref|ZP_07854594.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133A]
gi|314991589|ref|ZP_07857065.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133B]
gi|314994922|ref|ZP_07860049.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a01]
gi|383327538|ref|YP_005353422.1| DEAD/DEAH box helicase [Enterococcus faecium Aus0004]
gi|389867363|ref|YP_006374786.1| DEAD/DEAH box helicase [Enterococcus faecium DO]
gi|415892439|ref|ZP_11549927.1| cold-shock deAd box protein a [Enterococcus faecium E4453]
gi|416131873|ref|ZP_11597781.1| cold-shock deAd box protein a [Enterococcus faecium E4452]
gi|424795449|ref|ZP_18221304.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
S447]
gi|424819380|ref|ZP_18244487.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R501]
gi|424856321|ref|ZP_18280560.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R499]
gi|424949231|ref|ZP_18364921.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R496]
gi|424956289|ref|ZP_18371077.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R446]
gi|424967919|ref|ZP_18381589.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1140]
gi|424976047|ref|ZP_18389165.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1137]
gi|424981969|ref|ZP_18394659.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV99]
gi|424984734|ref|ZP_18397253.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV69]
gi|424987723|ref|ZP_18400084.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV38]
gi|424990961|ref|ZP_18403147.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV26]
gi|424995504|ref|ZP_18407380.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV168]
gi|424997413|ref|ZP_18409175.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV165]
gi|425000503|ref|ZP_18412062.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV161]
gi|425003235|ref|ZP_18414612.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV102]
gi|425006604|ref|ZP_18417774.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV1]
gi|425011167|ref|ZP_18422079.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E422]
gi|425013771|ref|ZP_18424487.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E417]
gi|425017560|ref|ZP_18428061.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C621]
gi|425022464|ref|ZP_18432645.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C497]
gi|425030171|ref|ZP_18435374.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C1904]
gi|425033448|ref|ZP_18438416.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 515]
gi|425034930|ref|ZP_18439786.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 514]
gi|425040930|ref|ZP_18445364.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 511]
gi|425044373|ref|ZP_18448536.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 510]
gi|425047569|ref|ZP_18451517.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 509]
gi|425053412|ref|ZP_18456957.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 506]
gi|430831942|ref|ZP_19449990.1| DEAD/DEAH box helicase [Enterococcus faecium E0333]
gi|430847435|ref|ZP_19465272.1| DEAD/DEAH box helicase [Enterococcus faecium E1133]
gi|430855628|ref|ZP_19473336.1| DEAD/DEAH box helicase [Enterococcus faecium E1392]
gi|431544298|ref|ZP_19518594.1| DEAD/DEAH box helicase [Enterococcus faecium E1731]
gi|431749300|ref|ZP_19538042.1| DEAD/DEAH box helicase [Enterococcus faecium E2297]
gi|431755816|ref|ZP_19544461.1| DEAD/DEAH box helicase [Enterococcus faecium E2883]
gi|431767952|ref|ZP_19556395.1| DEAD/DEAH box helicase [Enterococcus faecium E1321]
gi|431769544|ref|ZP_19557952.1| DEAD/DEAH box helicase [Enterococcus faecium E1644]
gi|431773402|ref|ZP_19561727.1| DEAD/DEAH box helicase [Enterococcus faecium E2369]
gi|431776500|ref|ZP_19564761.1| DEAD/DEAH box helicase [Enterococcus faecium E2560]
gi|431779582|ref|ZP_19567775.1| DEAD/DEAH box helicase [Enterococcus faecium E4389]
gi|431782613|ref|ZP_19570746.1| DEAD/DEAH box helicase [Enterococcus faecium E6012]
gi|431784440|ref|ZP_19572479.1| DEAD/DEAH box helicase [Enterococcus faecium E6045]
gi|68194452|gb|EAN08953.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Enterococcus faecium DO]
gi|257813070|gb|EEV41828.1| helicase [Enterococcus faecium 1,230,933]
gi|257817136|gb|EEV44464.1| helicase [Enterococcus faecium 1,231,502]
gi|257827060|gb|EEV53686.1| helicase [Enterococcus faecium 1,231,410]
gi|291598627|gb|EFF29685.1| ATP-dependent RNA helicase [Enterococcus faecium U0317]
gi|291605711|gb|EFF35148.1| cold-shock deAd box protein a [Enterococcus faecium E1162]
gi|313590904|gb|EFR69749.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a01]
gi|313593873|gb|EFR72718.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133B]
gi|313596242|gb|EFR75087.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133A]
gi|313597889|gb|EFR76734.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133C]
gi|313641641|gb|EFS06221.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a04]
gi|313645321|gb|EFS09901.1| DEAD/DEAH box helicase [Enterococcus faecium TX0082]
gi|364093335|gb|EHM35615.1| cold-shock deAd box protein a [Enterococcus faecium E4453]
gi|364093511|gb|EHM35776.1| cold-shock deAd box protein a [Enterococcus faecium E4452]
gi|378937232|gb|AFC62304.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecium Aus0004]
gi|388532612|gb|AFK57804.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium DO]
gi|402924387|gb|EJX44599.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
S447]
gi|402926241|gb|EJX46293.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R501]
gi|402930201|gb|EJX49880.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R499]
gi|402934931|gb|EJX54225.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R496]
gi|402946393|gb|EJX64674.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R446]
gi|402952005|gb|EJX69866.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1137]
gi|402953338|gb|EJX71063.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1140]
gi|402962168|gb|EJX79137.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV99]
gi|402967955|gb|EJX84466.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV69]
gi|402973745|gb|EJX89845.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV38]
gi|402977156|gb|EJX92995.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV168]
gi|402978215|gb|EJX93973.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV26]
gi|402986313|gb|EJY01444.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV165]
gi|402988977|gb|EJY03941.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV161]
gi|402992431|gb|EJY07139.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV102]
gi|402996952|gb|EJY11308.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV1]
gi|402997720|gb|EJY12029.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E422]
gi|403000335|gb|EJY14462.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E417]
gi|403002697|gb|EJY16644.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C497]
gi|403004081|gb|EJY17911.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C621]
gi|403004113|gb|EJY17941.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C1904]
gi|403009946|gb|EJY23359.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 515]
gi|403018997|gb|EJY31633.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 514]
gi|403027273|gb|EJY39167.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 511]
gi|403029941|gb|EJY41662.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 510]
gi|403030418|gb|EJY42102.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 506]
gi|403033364|gb|EJY44870.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 509]
gi|430480583|gb|ELA57757.1| DEAD/DEAH box helicase [Enterococcus faecium E0333]
gi|430537055|gb|ELA77408.1| DEAD/DEAH box helicase [Enterococcus faecium E1133]
gi|430546683|gb|ELA86626.1| DEAD/DEAH box helicase [Enterococcus faecium E1392]
gi|430592410|gb|ELB30425.1| DEAD/DEAH box helicase [Enterococcus faecium E1731]
gi|430611728|gb|ELB48804.1| DEAD/DEAH box helicase [Enterococcus faecium E2297]
gi|430616431|gb|ELB53345.1| DEAD/DEAH box helicase [Enterococcus faecium E2883]
gi|430630040|gb|ELB66417.1| DEAD/DEAH box helicase [Enterococcus faecium E1321]
gi|430636649|gb|ELB72713.1| DEAD/DEAH box helicase [Enterococcus faecium E2369]
gi|430636858|gb|ELB72912.1| DEAD/DEAH box helicase [Enterococcus faecium E1644]
gi|430640819|gb|ELB76647.1| DEAD/DEAH box helicase [Enterococcus faecium E2560]
gi|430641683|gb|ELB77478.1| DEAD/DEAH box helicase [Enterococcus faecium E4389]
gi|430647250|gb|ELB82698.1| DEAD/DEAH box helicase [Enterococcus faecium E6012]
gi|430649535|gb|ELB84911.1| DEAD/DEAH box helicase [Enterococcus faecium E6045]
Length = 503
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 133/254 (52%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQ 423
F K H +K K+
Sbjct: 195 FMKNPHHVKIKAKE 208
>gi|85860692|ref|YP_462894.1| ATP-dependent RNA helicase [Syntrophus aciditrophicus SB]
gi|85723783|gb|ABC78726.1| ATP-dependent RNA helicase [Syntrophus aciditrophicus SB]
Length = 423
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 134/252 (53%), Gaps = 52/252 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ + LHP + I LG+K PTPIQ IPA QG+D++G A+TG+GKT AF LPI+
Sbjct: 2 SFTQFNLHPQINAGIEALGYKTPTPIQMQSIPAII-QGRDVMGLAQTGTGKTAAFALPIL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
QRL+ GKM+ RALI+ PTRELA Q+ + + E+++ ++
Sbjct: 61 QRLMN---GPGKMV----------------RALIVAPTRELAEQINESINEMSRSTKLKS 101
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V + GG+S Q L+ E++V PGRL +L++ G + +L + FVLDEADRM +
Sbjct: 102 VALYGGVSKNPQIEKLRQGAEIIVACPGRLLDLVAQG---VADLSGIEVFVLDEADRMFD 158
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR-- 411
G E++ I LP +KRQTL+FSAT + AD R
Sbjct: 159 MGFLPEIRKITKQLP------------------------EKRQTLLFSAT--MPADIRSL 192
Query: 412 -KKLKHGSLKLK 422
K + H L ++
Sbjct: 193 AKDILHDPLTIR 204
>gi|145353647|ref|XP_001421118.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581354|gb|ABO99411.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 755
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 128/248 (51%), Gaps = 45/248 (18%)
Query: 159 EEELVSEAEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIG 216
E +V A+ T FDA ++EL L L ++ LG+K+PTPIQ A IP A G+D+ G
Sbjct: 132 ERAVVKGAKGDTTFDAKAFDELHLSRPLTRACEALGYKKPTPIQAAVIPIA-MTGRDVCG 190
Query: 217 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELAL 276
A TGSGKT AF LP ++R+L + P L++ PTRELA+
Sbjct: 191 RAVTGSGKTAAFMLPQLERMLHRGPR----------------PAAATHVLVLVPTRELAV 234
Query: 277 QVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 336
QV + +A+ +R V +VGG+S Q L+ RPE+VV TPGR+ + + H
Sbjct: 235 QVHQMTESLAQFTTIRAVLVVGGLSANVQAAALRTRPEIVVATPGRVIDHVRN--THSFG 292
Query: 337 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 396
L L+ +LDEADR++E G E++ I+ P KKRQ
Sbjct: 293 LEDLATLILDEADRLLEMGFLEEIKEIVRQCP------------------------KKRQ 328
Query: 397 TLVFSATI 404
TL+FSAT+
Sbjct: 329 TLLFSATL 336
>gi|297850038|ref|XP_002892900.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
lyrata]
gi|297338742|gb|EFH69159.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 131/249 (52%), Gaps = 49/249 (19%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEK 250
LG ++PTP+Q C+P G+D++G A+TGSGKT AF LPI+ RL E+
Sbjct: 72 LGMRKPTPVQTHCVPKIL-AGRDVLGLAQTGSGKTAAFALPILHRLAED----------- 119
Query: 251 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLK 310
P G + AL++TPTRELA Q+ + K + +N+R IVGGM Q R L
Sbjct: 120 --------PYG-VFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTRSLV 170
Query: 311 ARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 370
+RP +V+ TPGR+ L+ F VLDEADR+++ G EL++I LP
Sbjct: 171 SRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLP-- 228
Query: 371 NGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK--LKQSVNGL 428
K RQTL+FSAT ++++ + L+H S K ++ GL
Sbjct: 229 ----------------------KSRQTLLFSAT--MTSNLQTLLEHSSNKAYFYEAYEGL 264
Query: 429 NSIETLSER 437
+++TL+++
Sbjct: 265 KTVDTLTQQ 273
>gi|301777516|ref|XP_002924172.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Ailuropoda
melanoleuca]
gi|281354104|gb|EFB29688.1| hypothetical protein PANDA_013454 [Ailuropoda melanoleuca]
Length = 853
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 120/223 (53%), Gaps = 23/223 (10%)
Query: 244 GKMLEEKGEEAE--KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMS 301
GK+ EE G + K PK L L++TPTRELA+QV H+ VAK ++ +VGGMS
Sbjct: 360 GKLKEELGGKIATCKAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMS 419
Query: 302 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 361
+KQ+R+L +PE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL
Sbjct: 420 AQKQQRMLNRQPEIVVATPGRLWELIKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELS 479
Query: 362 SIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKL 421
+++ML S KRQTL+FSAT+ L ++ H K
Sbjct: 480 QLLEML-------------------SDSQYNPKRQTLIFSATLTLVHQAPARILHK--KH 518
Query: 422 KQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
+ ++ ++ L ++ GMR ++DLT L E+ I
Sbjct: 519 VKKIDKTAKLDLLVQKIGMRGKPKVIDLTRNEATVESLTETKI 561
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 188 DVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 247
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 248 PMIHAVLQ 255
>gi|195032613|ref|XP_001988529.1| GH11216 [Drosophila grimshawi]
gi|193904529|gb|EDW03396.1| GH11216 [Drosophila grimshawi]
Length = 864
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 146/238 (61%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +WNE P +++ I +G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 431 IPNPIRSWNESGFPPEIIEIIDTVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 489
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 490 FLIPLLSWI----QSLPKI--ERLEDVDQ-GP----YAIIMAPTRELAQQIEEETIKFGQ 538
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 539 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 595
Query: 348 ADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 596 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDEKKLMENFYTKKKYRQTVMFTATM 653
>gi|424869804|ref|ZP_18293485.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R497]
gi|402935190|gb|EJX54460.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R497]
Length = 501
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 134/259 (51%), Gaps = 53/259 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQSVNGL 428
F K H +K K+ L
Sbjct: 195 FMKNPHHVKIKAKEMTADL 213
>gi|302036818|ref|YP_003797140.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
gi|190343232|gb|ACE75620.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
gi|300604882|emb|CBK41215.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
Length = 431
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 128/236 (54%), Gaps = 47/236 (19%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
+T F +++ L + P L++++ + GF EPT IQ IP A G+D++G A+TG+GKT AF
Sbjct: 3 TTAFTSFDSLGVSPTLLRNLTKAGFAEPTAIQAQAIPHAL-AGRDVLGCAQTGTGKTAAF 61
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG 288
+P+++RL PKG RALI+ PTRELA+Q+ + + +
Sbjct: 62 VIPMLERL-------------------SGTPKGQPRALILAPTRELAIQIQATIDTLGRD 102
Query: 289 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 348
+ + +VGG + Q R L+ RP+++V TPGRL + M G + L +S VLDEA
Sbjct: 103 LQLFATTVVGGADMQAQVRGLRQRPDIIVATPGRLLDHMWNGT---ISLLAMSILVLDEA 159
Query: 349 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DRM++ G +++ I+D +P ++RQTL+FSAT+
Sbjct: 160 DRMLDMGFAQQINQILDAMP------------------------EERQTLLFSATM 191
>gi|338535344|ref|YP_004668678.1| putative ATP-dependent RNA helicase RhlE [Myxococcus fulvus HW-1]
gi|337261440|gb|AEI67600.1| putative ATP-dependent RNA helicase RhlE [Myxococcus fulvus HW-1]
Length = 516
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 124/230 (53%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL+LH L++++ G+ PTPIQ+ IP A G+D++G A+TG+GKT AF LPI+Q
Sbjct: 3 FDELQLHDTLLRAVKAEGYTTPTPIQQKAIPHAL-TGRDVLGVAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL + G +R L++TPTRELA QV D + KG+ +R
Sbjct: 62 RLSAKAPAGGAR---------------PVRCLVLTPTRELAGQVGDSFQTYGKGLPLRHA 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ Q + L+ +++V TPGRL +LM E+ V L +L FVLDEADRM++
Sbjct: 107 VIFGGVGQNPQVQALRNGVDVLVATPGRLLDLM---EQGFVSLRSLEVFVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ +I LP KRQTL FSAT+
Sbjct: 164 GFIHDVRRVIKALP------------------------PKRQTLFFSATL 189
>gi|296215803|ref|XP_002754286.1| PREDICTED: ATP-dependent RNA helicase DDX24 isoform 1 [Callithrix
jacchus]
Length = 856
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 119/218 (54%), Gaps = 22/218 (10%)
Query: 247 LEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQE 306
L++K + Y PK L L++TPTRELALQV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 371 LDDKSATCKAY-PKRPLLGLVLTPTRELALQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 429
Query: 307 RLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 366
R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 430 RMLNRYPEIVIATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 489
Query: 367 LPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVN 426
L N+ Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 490 L------NDSQYN-------------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 528
Query: 427 GLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESFI 464
++ L + G+R ++DLT L E+ I
Sbjct: 529 KTAKLDLLMHKIGIRGKPKVIDLTRNEATVETLTETKI 566
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 249 PMIHAVLQ 256
>gi|146420455|ref|XP_001486183.1| hypothetical protein PGUG_01854 [Meyerozyma guilliermondii ATCC
6260]
Length = 575
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 133/238 (55%), Gaps = 18/238 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W E + L+ +I +LG+KEPTPIQ+A IP A +D++G AETGSGKTLA
Sbjct: 145 IPNPLRSWKESGIPTTLLNTIDQLGYKEPTPIQRAAIPTALGH-RDVVGIAETGSGKTLA 203
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ L +K +E K E + + L++ PTRELALQ++ K+ A
Sbjct: 204 FLIPLLS-YLSAIDKDYMEVEHKQE-----SNLNKVLGLVLAPTRELALQISKEAKKFAS 257
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ VV I+GG E+ + ++ +VV TPGR L+ EK L++L +DE
Sbjct: 258 VLGYNVVTIIGGHQYEETVKSVQDGAHIVVATPGR---LIDSAEKGLIDLSQCYHLTMDE 314
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
ADRMI+ G + LQSI+ LP T+ S G + + + K R TL+F+ATI+
Sbjct: 315 ADRMIDMGFEKALQSILSFLPSTSSSGFG--------LDSTIFKVKSRITLMFTATIS 364
>gi|195344854|ref|XP_002038991.1| GM17282 [Drosophila sechellia]
gi|194134121|gb|EDW55637.1| GM17282 [Drosophila sechellia]
Length = 822
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 146/238 (61%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +WNE ++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 389 IPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 447
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 448 FLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFGQ 496
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 497 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 553
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F+AT+
Sbjct: 554 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYSKKKYRQTVMFTATM 611
>gi|145357256|ref|XP_001422836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583080|gb|ABP01195.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 710
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 128/248 (51%), Gaps = 45/248 (18%)
Query: 159 EEELVSEAEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIG 216
E +V A+ T FDA ++EL L L ++ LG+K+PTPIQ A IP A G+D+ G
Sbjct: 132 ERAVVKGAKGDTTFDAKAFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAM-TGRDVCG 190
Query: 217 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELAL 276
A TGSGKT AF LP ++R+L + P L++ PTRELA+
Sbjct: 191 RAVTGSGKTAAFMLPQLERMLHRGPR----------------PAAATHVLVLVPTRELAV 234
Query: 277 QVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 336
QV + +A+ +R V +VGG+S Q L+ RPE+VV TPGR+ + + H
Sbjct: 235 QVHQMTESLAQFTTIRAVLVVGGLSANVQAAALRTRPEIVVATPGRVIDHVRN--THSFG 292
Query: 337 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 396
L L+ +LDEADR++E G E++ I+ P KKRQ
Sbjct: 293 LEDLATLILDEADRLLEMGFLEEIKEIVRQCP------------------------KKRQ 328
Query: 397 TLVFSATI 404
TL+FSAT+
Sbjct: 329 TLLFSATL 336
>gi|424762589|ref|ZP_18190093.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
TX1337RF]
gi|431757804|ref|ZP_19546433.1| DEAD/DEAH box helicase [Enterococcus faecium E3083]
gi|402424479|gb|EJV56656.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
TX1337RF]
gi|430618309|gb|ELB55156.1| DEAD/DEAH box helicase [Enterococcus faecium E3083]
Length = 503
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 135/259 (52%), Gaps = 53/259 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-VGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P ++RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------EQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQSVNGL 428
F K H +K K+ L
Sbjct: 195 FMKSPHHVKIKAKEMTADL 213
>gi|239637375|ref|ZP_04678357.1| cold-shock DEAD box protein A [Staphylococcus warneri L37603]
gi|239596975|gb|EEQ79490.1| cold-shock DEAD box protein A [Staphylococcus warneri L37603]
Length = 509
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 135/225 (60%), Gaps = 35/225 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLESMGFKEPTPIQKDSIPYAL-EGHDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ GE+ +++LI+ PTRELA+QV + LK +KG NV+VV
Sbjct: 63 KVV-------------GEQG--------VQSLILAPTRELAMQVAEQLKVFSKGQNVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 399
G +++ I+D +P +EQ QT + S+ K QTLV
Sbjct: 159 GFIDDMRFIMDKIP---------AEQRQTML-FSATMPKAIQTLV 193
>gi|440798652|gb|ELR19719.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 906
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 143/252 (56%), Gaps = 26/252 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E +L +L+ +I G+K+P PIQ IP QG+D+IG AETGSGKT AF LP++
Sbjct: 477 WGESKLPTVLLDAIESAGYKQPMPIQMQSIPIGL-QGRDLIGLAETGSGKTCAFVLPMLV 535
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K M E + ALI+ PTRELALQ+ + A + R V
Sbjct: 536 YI----SKLPPMTAENAADGPY--------ALIMAPTRELALQIEQEAAKFASAMGFRTV 583
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG S E+Q L+ E+++ TPGRL + + E+ V L+ ++ VLDEADRM++
Sbjct: 584 AVVGGQSIEEQGFSLRRGAEILIATPGRLVDCL---EQRYVVLNQCNYVVLDEADRMVDM 640
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-----RQTLVFSATIALSAD 409
G ++ +I+D +P +N +E ++T +++LQ +K R T++FSAT+ ++ +
Sbjct: 641 GFEVQVTTILDAMPSSNLKSE---DETTAEEQMAALQEEKPDHVYRTTVMFSATMPVAVE 697
Query: 410 --FRKKLKHGSL 419
RK L+H ++
Sbjct: 698 RLARKYLRHPAV 709
>gi|198427069|ref|XP_002129152.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
[Ciona intestinalis]
Length = 452
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 141/266 (53%), Gaps = 54/266 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L+ +++ + LGF +PTPIQ CIP QGKD G ++TGSGKT AF LP++Q
Sbjct: 7 FADLGLNEWIIQHLGNLGFNKPTPIQYNCIPPIL-QGKDCFGCSKTGSGKTAAFALPVLQ 65
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L E+ P G + L++TPTRELA Q+++ + K IN+R
Sbjct: 66 KLSED-------------------PYG-IFCLVLTPTRELAYQISEQFTLIGKPINIRTS 105
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE- 353
IVGGM +Q L+ +P +V+ TPGRL +L+ E + + F VLDEADR+++
Sbjct: 106 VIVGGMDIIQQAYELQKKPHIVIATPGRLADLLRSNE------NNVKFLVLDEADRLLDK 159
Query: 354 -NGHF-RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 411
+G F +L I LP K+RQTL+FSAT+ + +
Sbjct: 160 LDGDFTNDLNLIFSSLP------------------------KERQTLLFSATLTDTLNEV 195
Query: 412 KKLKHGSLKLKQSVNGLNSIETLSER 437
K+L S QS N +++++ L +R
Sbjct: 196 KELSTKSPFFWQSDNKVSTVDNLDQR 221
>gi|340751823|ref|ZP_08688633.1| ATP-dependent RNA helicase [Fusobacterium mortiferum ATCC 9817]
gi|229420786|gb|EEO35833.1| ATP-dependent RNA helicase [Fusobacterium mortiferum ATCC 9817]
Length = 545
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 114/191 (59%), Gaps = 24/191 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L +K++ + G+++PTPIQ IPA + KDIIG A+TG+GKT AF LPI+
Sbjct: 7 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPIL- 65
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + P ++A+++ PTRELALQV + + +A G +R+
Sbjct: 66 --------------------ENFEPSKVIQAIVLAPTRELALQVAEEMNSLAHGKKIRIT 105
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S E Q R LK +++VGTPGR+ +LM E+ L++L L +F+LDEAD M+
Sbjct: 106 PVYGGQSIEFQIRQLKKGTDIIVGTPGRVIDLM---ERKLIKLQDLKYFILDEADEMLNM 162
Query: 355 GHFRELQSIID 365
G +++ I++
Sbjct: 163 GFVEDIEKILE 173
>gi|392988049|ref|YP_006486642.1| DEAD/DEAH box helicase [Enterococcus hirae ATCC 9790]
gi|392335469|gb|AFM69751.1| DEAD-box ATP dependent DNA helicase [Enterococcus hirae ATCC 9790]
Length = 503
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 135/259 (52%), Gaps = 53/259 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-SGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDTNRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKRVRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVETLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++++II +P ++RQTL+FSAT+ +
Sbjct: 159 GFLEDIENIISKVP------------------------EERQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQSVNGL 428
F K H +K K+ L
Sbjct: 195 FMKSPTHVKIKAKEMTADL 213
>gi|227550862|ref|ZP_03980911.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium
TX1330]
gi|257887886|ref|ZP_05667539.1| helicase [Enterococcus faecium 1,141,733]
gi|257893315|ref|ZP_05672968.1| helicase [Enterococcus faecium 1,231,408]
gi|293379275|ref|ZP_06625421.1| DEAD/DEAH box helicase [Enterococcus faecium PC4.1]
gi|431036552|ref|ZP_19492322.1| DEAD/DEAH box helicase [Enterococcus faecium E1590]
gi|431752972|ref|ZP_19541651.1| DEAD/DEAH box helicase [Enterococcus faecium E2620]
gi|431763081|ref|ZP_19551634.1| DEAD/DEAH box helicase [Enterococcus faecium E3548]
gi|227179960|gb|EEI60932.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium
TX1330]
gi|257823940|gb|EEV50872.1| helicase [Enterococcus faecium 1,141,733]
gi|257829694|gb|EEV56301.1| helicase [Enterococcus faecium 1,231,408]
gi|292642071|gb|EFF60235.1| DEAD/DEAH box helicase [Enterococcus faecium PC4.1]
gi|430563092|gb|ELB02323.1| DEAD/DEAH box helicase [Enterococcus faecium E1590]
gi|430612933|gb|ELB49957.1| DEAD/DEAH box helicase [Enterococcus faecium E2620]
gi|430622775|gb|ELB59485.1| DEAD/DEAH box helicase [Enterococcus faecium E3548]
Length = 503
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 134/259 (51%), Gaps = 53/259 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-VGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQSVNGL 428
F K H +K K+ L
Sbjct: 195 FMKSPHHVKIKAKEMTADL 213
>gi|157121045|ref|XP_001653747.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882993|gb|EAT47218.1| AAEL001657-PA [Aedes aegypti]
Length = 814
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 143/238 (60%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I F +W+E ++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 381 IPNPFRSWSETGFPKEILDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGIAETGSGKTLA 439
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ ++ K ++ E P A+I+ PTRELA Q+ + ++ +
Sbjct: 440 FLIPLLT-WIQSLPKIDRL------ETADQGP----YAIILAPTRELAQQIEEETQKFGQ 488
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 489 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 545
Query: 348 ADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 546 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDASKLMENFNTKKKYRQTVMFTATM 603
>gi|417644460|ref|ZP_12294450.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus warneri
VCU121]
gi|330684829|gb|EGG96522.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU121]
Length = 509
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 135/225 (60%), Gaps = 35/225 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLESMGFKEPTPIQKDSIPYAL-EGHDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ GE+ +++LI+ PTRELA+QV + LK +KG NV+VV
Sbjct: 63 KVV-------------GEQG--------VQSLILAPTRELAMQVAEQLKVFSKGQNVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 399
G +++ I+D +P +EQ QT + S+ K QTLV
Sbjct: 159 GFIDDMRFIMDKIP---------AEQRQTML-FSATMPKAIQTLV 193
>gi|50284995|ref|XP_444926.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661507|sp|Q6FY67.1|MAK5_CANGA RecName: Full=ATP-dependent RNA helicase MAK5
gi|49524228|emb|CAG57819.1| unnamed protein product [Candida glabrata]
Length = 733
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 157/308 (50%), Gaps = 47/308 (15%)
Query: 169 STEFDAWNE-LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
S E W + + L + + LGF E TPIQK IPAA +GKDI+G A TGSGKTLA
Sbjct: 150 SGELPGWTDTVDLSMTTINGLSNLGFTEMTPIQKLSIPAAL-EGKDIMGKASTGSGKTLA 208
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
+G+PI++++++ ++ L G +I TPTRELA QVT HL+ V
Sbjct: 209 YGIPIIEKMIKSKDN----LRTNG--------------IIFTPTRELAQQVTKHLQNVCS 250
Query: 288 GI----NVRVVPIVGGMSTEKQERLLK--ARPELVVGTPGRLWELMSGGEKHLVELHTLS 341
+ ++ + GG+S +KQERLLK +VV TPGR EL+ E+ + +
Sbjct: 251 MLLKKNPYMILSLTGGLSIQKQERLLKYDGSARIVVATPGRFLELIEKNEELMKRFAKID 310
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 401
VLDEADR++++GHF E + I+ L S + + QTL++S
Sbjct: 311 VLVLDEADRLLQDGHFDEFEKILKHLGRIRKSLKNM---------------EYWQTLIYS 355
Query: 402 ATIALSADFRKKLKHGSLKLKQSVNGLNSIET----LSERAGMRANVAIVDLTNVSVLAN 457
AT S D KL + S K K + + +E+ L + ++ ++D ++
Sbjct: 356 AT--FSTDLFDKLANSSWKKKNNSKDESEMESVLKHLMTKINFKSKPMMIDANPEDKISA 413
Query: 458 KLEESFIE 465
+++ES IE
Sbjct: 414 QIKESLIE 421
>gi|24584994|ref|NP_609888.2| CG10333 [Drosophila melanogaster]
gi|22946759|gb|AAF53680.2| CG10333 [Drosophila melanogaster]
gi|60677727|gb|AAX33370.1| RH55640p [Drosophila melanogaster]
Length = 822
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 146/238 (61%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +WNE ++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 389 IPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 447
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 448 FLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFGQ 496
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 497 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 553
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F+AT+
Sbjct: 554 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATM 611
>gi|374323237|ref|YP_005076366.1| RNA helicase exp9 (Exported protein 9) [Paenibacillus terrae
HPL-003]
gi|357202246|gb|AET60143.1| RNA helicase exp9 (Exported protein 9) [Paenibacillus terrae
HPL-003]
Length = 529
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 141/254 (55%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E L P ++++I LGF+E TPIQ IP A QG+D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFNLEPKVLEAITELGFEEATPIQSQSIPLAL-QGRDMIGQAQTGTGKTAAFGIPLIS 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +K +RALI+ PTRELA+QV + ++++++ +R +
Sbjct: 63 KISRNDDK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRTL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 103 PIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 160 GFMEDIQSILKQVP------------------------DERQTMLFSATMPPNIKRLAEQ 195
Query: 410 FRKKLKHGSLKLKQ 423
F K +H S+ KQ
Sbjct: 196 FLKNPEHVSVIPKQ 209
>gi|445059172|ref|YP_007384576.1| DEAD-box ATP dependent DNA helicase [Staphylococcus warneri SG1]
gi|443425229|gb|AGC90132.1| DEAD-box ATP dependent DNA helicase [Staphylococcus warneri SG1]
Length = 509
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 135/225 (60%), Gaps = 35/225 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLESMGFKEPTPIQKDSIPYAL-EGHDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ GE+ +++LI+ PTRELA+QV + LK +KG NV+VV
Sbjct: 63 KVV-------------GEQG--------VQSLILAPTRELAMQVAEQLKVFSKGQNVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 399
G +++ I+D +P +EQ QT + S+ K QTLV
Sbjct: 159 GFIDDMRFIMDKIP---------AEQRQTML-FSATMPKAIQTLV 193
>gi|418322741|ref|ZP_12934053.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
pettenkoferi VCU012]
gi|365231063|gb|EHM72126.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
pettenkoferi VCU012]
Length = 496
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 133/230 (57%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + +++++ +GF+EPTPIQ+ IP A +G+DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISAKTVETLHNMGFEEPTPIQQESIPYAL-EGRDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK + ++ALI+ PTRELA+QV + L+E ++G VRVV
Sbjct: 62 --------------------EKVVGRDGVQALILAPTRELAMQVAEQLREFSEGQRVRVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM ++Q + LK RP++VVGTPGR+ + ++ +HTL VLDEAD M+
Sbjct: 102 TVFGGMPIDRQIKALKKRPQIVVGTPGRVIDHLNRRTLKTNGIHTL---VLDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +++RQT++FSAT+
Sbjct: 159 GFIDDMKFIMDKIP-----------------------KEQRQTMLFSATM 185
>gi|431792618|ref|YP_007219523.1| DNA/RNA helicase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782844|gb|AGA68127.1| DNA/RNA helicase, superfamily II [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 500
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 127/233 (54%), Gaps = 48/233 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
+ EL L L+KS+ +GF+E TPIQ+ IP A +GKD+IG A+TG+GKT AFG+P
Sbjct: 1 MSTFKELGLSEPLIKSVLNMGFEEATPIQEQTIPLAL-EGKDVIGQAQTGTGKTAAFGIP 59
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
++Q++ E E ++ +++TPTRELA+QV + L ++ + +
Sbjct: 60 LIQKIAETSE--------------------DIQGIVLTPTRELAVQVAEELNKIGQFKGI 99
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
R +PI GG ++Q R LK RP ++V TPGRL + M + + L ++ +LDEAD M
Sbjct: 100 RTLPIYGGQEIDRQIRALKKRPHIIVATPGRLMDHM---RRRTIRLQNINMVILDEADEM 156
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+ G ++++I+ +P + RQTL+FSAT+
Sbjct: 157 LNMGFVEDIETILQEIP------------------------EARQTLLFSATM 185
>gi|427429668|ref|ZP_18919655.1| ATP-dependent RNA helicase RhlE [Caenispirillum salinarum AK4]
gi|425879905|gb|EKV28606.1| ATP-dependent RNA helicase RhlE [Caenispirillum salinarum AK4]
Length = 469
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 125/230 (54%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L+ L+K++ G++ PTPIQ IP G+D++G A+TG+GKT AF LP++Q
Sbjct: 4 FTDLGLNESLLKALAEDGYETPTPIQAKAIPLLL-DGRDVLGIAQTGTGKTAAFALPMLQ 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL++ +AG PKG RALI+TPTRELA+Q+ D +K + + R
Sbjct: 63 RLMDSNRRAG--------------PKG-CRALILTPTRELAVQINDSIKSYGRHLRHRTA 107
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ Q R L +L++ TPGRL +LM+ G V + FVLDEADRM++
Sbjct: 108 CIFGGVGMNPQIRALSGGVDLLIATPGRLIDLMNQG---YVRFDKVEEFVLDEADRMLDM 164
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G R+++ ++D LP R TL+FSAT+
Sbjct: 165 GFVRDVRKVVDRLP------------------------GDRHTLLFSATM 190
>gi|226312984|ref|YP_002772878.1| ATP-dependent RNA helicase [Brevibacillus brevis NBRC 100599]
gi|226095932|dbj|BAH44374.1| probable ATP-dependent RNA helicase [Brevibacillus brevis NBRC
100599]
Length = 529
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 49/230 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+++ LH ++++I+ +GF+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVL-DGGDLIGQAQTGTGKTAAFGIPLV- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK P ++A+++TPTRELA+QV L ++K VR +
Sbjct: 62 --------------------EKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTL 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG S Q R L+ ++VVGTPGR+ + + L +HTL VLDEAD M++
Sbjct: 102 PIYGGQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDHVHTL---VLDEADEMLDM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++II+ +P +RQTL+FSAT+
Sbjct: 159 GFIEDIETIINHMP------------------------DERQTLLFSATM 184
>gi|347751920|ref|YP_004859485.1| DEAD/DEAH box helicase domain-containing protein [Bacillus
coagulans 36D1]
gi|347584438|gb|AEP00705.1| DEAD/DEAH box helicase domain protein [Bacillus coagulans 36D1]
Length = 475
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 130/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL L P ++K++ R+GF+E +PIQ A IP QGKDIIG A+TG+GKT AFG+P+++
Sbjct: 4 FSELNLSPAILKAVKRMGFEEASPIQAATIPLTM-QGKDIIGQAQTGTGKTAAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + R + +++ +II PTRELA+QV++ L + + V V+
Sbjct: 63 KI-DHRSR-------------------NIQGIIIAPTRELAIQVSEELYRIGQDSRVHVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK P+++VGTPGR+ + + G L +HTL VLDEAD M+
Sbjct: 103 AVYGGQDISRQIRALKNHPQIIVGTPGRILDHIHRGTLKLDHVHTL---VLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P K RQT++FSAT+
Sbjct: 160 GFIDDIEAILSTVP------------------------KDRQTMLFSATM 185
>gi|145498132|ref|XP_001435054.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402183|emb|CAK67657.1| unnamed protein product [Paramecium tetraurelia]
Length = 729
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 118/192 (61%), Gaps = 21/192 (10%)
Query: 175 WNELR-LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
WN+ +H +++++ GF PTP+Q + + K II A++TGSGKTLAFG+P++
Sbjct: 3 WNQFEAIHQEVIQNLENNGFATPTPVQVEVL-NNYQKHKHIIIASQTGSGKTLAFGIPLI 61
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+L+ +K P + ALI+TPTRELA+Q+ HLK + N+ +
Sbjct: 62 SEILKNMDKY---------------PAKQIIALILTPTRELAMQIYKHLKAIT---NLSI 103
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE-LHTLSFFVLDEADRMI 352
+VGGMS EKQ+R++ A P +++ TPGRLW+ + E ++ L+ + F ++DEADRM+
Sbjct: 104 GCLVGGMSKEKQKRIINAAPVILIATPGRLWDFIENEENDKIKNLNLIKFLIIDEADRMV 163
Query: 353 ENGHFRELQSII 364
E GHF +L +I+
Sbjct: 164 ELGHFPQLDNIM 175
>gi|326431316|gb|EGD76886.1| hypothetical protein PTSG_08233 [Salpingoeca sp. ATCC 50818]
Length = 777
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 165/305 (54%), Gaps = 44/305 (14%)
Query: 117 VQKEQE-KNLKNQKGKKKKK---------------KKKGKKIKTVEESVTVSNGPDDAEE 160
VQKEQE + L+ + KK+K+ K+ +I + ++T + G
Sbjct: 378 VQKEQEDRRLRKLRQKKQKQLFDERHWSEKPLADMTKRDWRIFREDYNITTTGG------ 431
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAET 220
I + W+E L P +++ I LGFKEPTPIQ+A +P +DI G AET
Sbjct: 432 ------RIPSPLRFWSESGLDPRILEIIDDLGFKEPTPIQRAALPIGL-TNRDICGVAET 484
Query: 221 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 280
GSGKTLAF LP++Q +L K+ E+ + YA +I+ P+REL Q+ +
Sbjct: 485 GSGKTLAFVLPLLQWILS----LPKLEREQDIDNGPYA-------IILAPSRELVQQIEE 533
Query: 281 HLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
++ + + VR V ++GG S E+Q L+ E+V+ TPGRL +++ ++LV L+
Sbjct: 534 QTRKFSDPLGVRTVAVIGGASREEQGFQLRQGCEVVIATPGRLIDVLEN--RYLV-LNQC 590
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGS-NEGQSEQTQTCVTVSSLQRKKRQTLV 399
++ V+DEADRM++ G +Q I++ +P+TN N ++E + + K RQT++
Sbjct: 591 TYVVMDEADRMLDMGFEPAVQQILEHVPVTNQKPNTDEAEDEAFLLQDIKNKNKYRQTVL 650
Query: 400 FSATI 404
F+AT+
Sbjct: 651 FTATM 655
>gi|398814336|ref|ZP_10573017.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. BC25]
gi|398036605|gb|EJL29814.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. BC25]
Length = 529
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 49/230 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+++ LH ++++I+ +GF+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVL-DGGDLIGQAQTGTGKTAAFGIPLV- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK P ++A+++TPTRELA+QV L ++K VR +
Sbjct: 62 --------------------EKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTL 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG S Q R L+ ++VVGTPGR+ + + L +HTL VLDEAD M++
Sbjct: 102 PIYGGQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDNVHTL---VLDEADEMLDM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++II+ +P +RQTL+FSAT+
Sbjct: 159 GFIEDIETIINHMP------------------------DERQTLLFSATM 184
>gi|405961989|gb|EKC27711.1| Putative ATP-dependent RNA helicase DDX49 [Crassostrea gigas]
gi|405977898|gb|EKC42325.1| Putative ATP-dependent RNA helicase DDX49 [Crassostrea gigas]
Length = 464
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 123/231 (53%), Gaps = 47/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L+ L + +G ++PTPIQ CIP +GKD IG A+TGSGKT AF LPI+Q
Sbjct: 18 FEKLGLNEWLWTQCHNMGLRQPTPIQVNCIPPIL-EGKDCIGCAKTGSGKTAAFALPILQ 76
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L E+ P G + AL++TPTRELA Q+ + + K INVRV
Sbjct: 77 KLSED-------------------PFG-IFALVLTPTRELAFQIAEQFNVLGKPINVRVT 116
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ +Q L+ +P +V+ TPGRL + + + L + F VLDEADR+IE+
Sbjct: 117 VITGGLDMMQQGIDLQVKPHIVISTPGRLADHLQSCDTF--SLRKIKFLVLDEADRLIED 174
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
+L++I +LP KKRQTL+FSAT+
Sbjct: 175 DFGEQLETIFKVLP------------------------KKRQTLLFSATMT 201
>gi|354489656|ref|XP_003506977.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Cricetulus griseus]
gi|344257276|gb|EGW13380.1| ATP-dependent RNA helicase DDX24 [Cricetulus griseus]
Length = 853
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 119/214 (55%), Gaps = 23/214 (10%)
Query: 239 EREKAGKMLEEKGEEAEKY--APKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
+ E+AGK+ + + Y P+ L L++TPTRELA+QV H+ VAK ++ +
Sbjct: 357 DEEQAGKLKQGLCDRIAIYRVHPRRPLLGLVLTPTRELAVQVRQHIDAVAKFTGIKTAIL 416
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
VGGMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GH
Sbjct: 417 VGGMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGH 476
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 416
F EL +++ML N+ Q RQTLVFSAT+ L ++ H
Sbjct: 477 FAELSQLLEML------NDSQYN-------------PNRQTLVFSATLTLVHQVPARILH 517
Query: 417 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
K + ++ ++ L ++ GMR ++DLT
Sbjct: 518 K--KHVKKMDKTTKLDLLMQKIGMRGKPKVIDLT 549
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
TVS P A+ + + + AW +L + +++++ LGF PTPIQ +P A
Sbjct: 172 TVSKVPKKAKTWMPEVQDQKADVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLPPAIR 231
Query: 210 QGKDIIGAAETGSGKTLAFGLPIMQRLLE 238
DI+GAAETGSGKTLAF +P++ +L+
Sbjct: 232 DKLDILGAAETGSGKTLAFAIPMIHAVLQ 260
>gi|15896262|ref|NP_349611.1| ATP-dependent RNA [Clostridium acetobutylicum ATCC 824]
gi|337738217|ref|YP_004637664.1| ATP-dependent RNA helicase [Clostridium acetobutylicum DSM 1731]
gi|384459728|ref|YP_005672148.1| ATP-dependent RNA helicase (superfamily II) [Clostridium
acetobutylicum EA 2018]
gi|15026068|gb|AAK80951.1|AE007798_3 ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis
ortholog [Clostridium acetobutylicum ATCC 824]
gi|325510417|gb|ADZ22053.1| ATP-dependent RNA helicase (superfamily II) [Clostridium
acetobutylicum EA 2018]
gi|336293434|gb|AEI34568.1| ATP-dependent RNA helicase [Clostridium acetobutylicum DSM 1731]
Length = 528
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 143/251 (56%), Gaps = 52/251 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+++L+L+ ++K+I +GF+EP+ IQ IP G D+IG A+TG+GKT+AFG PI+
Sbjct: 6 FSDLKLNSSVLKAIDDMGFEEPSKIQAEAIPVVI-DGYDMIGQAQTGTGKTVAFGAPIIS 64
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + EK G ++A+I+TPTRELA+Q+TD L ++K VRV+
Sbjct: 65 KIKDIDEKEG------------------VQAIILTPTRELAIQITDELTRLSKYARVRVL 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG S E+Q R +K +++V TPGR +M ++ V+L + F VLDEAD M++
Sbjct: 107 PIYGGQSIERQMRAIKRGVDVIVATPGR---IMDHIKRKTVKLDKVKFLVLDEADEMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G +++ II N S + RQT++FSAT+ L+++
Sbjct: 164 GFIDDIEGII-----KNISGD-------------------RQTMLFSATMPAPIKKLASN 199
Query: 410 FRKK-LKHGSL 419
+ KK +KH ++
Sbjct: 200 YMKKEVKHIAI 210
>gi|90578695|ref|ZP_01234505.1| putative ATP-dependent RNA helicase, DEAD boxfamily protein
[Photobacterium angustum S14]
gi|90439528|gb|EAS64709.1| putative ATP-dependent RNA helicase, DEAD boxfamily protein
[Photobacterium angustum S14]
Length = 427
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 127/235 (54%), Gaps = 37/235 (15%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ L LHP L+K++ LG+ PT +Q+ IP A +G D++ A+TG+GKT AF LP++
Sbjct: 2 SFQSLNLHPNLLKALTELGYSTPTDVQQQAIPLAL-KGDDVMAGAQTGTGKTAAFALPLL 60
Query: 234 QRLL---EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
QRL+ + E+ +E + + ++RALI+TPTRELA QV D + AK
Sbjct: 61 QRLMTLPSQAEQVSTAIENN------HKSRNNIRALILTPTRELAQQVYDSITTYAKYTE 114
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
++V GG S Q + L A E++V TPGRL + + G L E+ T FVLDEADR
Sbjct: 115 IKVAVAYGGTSMNVQVKALNAGAEILVATPGRLLDHVFNGSVSLSEVET---FVLDEADR 171
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
M++ G ++Q I+ +P +RQTL FSAT +
Sbjct: 172 MLDMGFIVDIQRIMKRMP------------------------AERQTLFFSATFS 202
>gi|375090043|ref|ZP_09736362.1| hypothetical protein HMPREF9708_00752 [Facklamia languida CCUG
37842]
gi|374565936|gb|EHR37191.1| hypothetical protein HMPREF9708_00752 [Facklamia languida CCUG
37842]
Length = 499
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 125/216 (57%), Gaps = 49/216 (22%)
Query: 190 RLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 249
++GF+EPTPIQ+ IP A QGKD+IG A+TG+GKT AFGLP++Q L +R ++
Sbjct: 18 QMGFEEPTPIQQQAIPLAL-QGKDLIGQAQTGTGKTAAFGLPLLQHL--DRNQSA----- 69
Query: 250 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ-ERL 308
++ L++TPTRELA+QV + L + KG+ RV + GG S KQ ER+
Sbjct: 70 -------------IQGLVVTPTRELAIQVQEELYRLGKGVRARVYVVYGGTSLSKQIERI 116
Query: 309 LKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 368
+ +P+++VGTPGRL +L+ ++ +++ + L VLDEAD M+ G ++++II P
Sbjct: 117 KRQQPQIIVGTPGRLLDLI---QRKVLKFNHLQTLVLDEADEMLNMGFIEDIKAIIQATP 173
Query: 369 MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
K RQTL+FSAT+
Sbjct: 174 ------------------------KNRQTLLFSATM 185
>gi|429220230|ref|YP_007181874.1| DNA/RNA helicase [Deinococcus peraridilitoris DSM 19664]
gi|429131093|gb|AFZ68108.1| DNA/RNA helicase, superfamily II [Deinococcus peraridilitoris DSM
19664]
Length = 477
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 128/238 (53%), Gaps = 48/238 (20%)
Query: 168 ISTEF-DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
++T F DA++ L LH L +++ LG+ +PTPIQ +P A QG+D++GAA+TGSGKT
Sbjct: 1 MTTTFADAFSALDLHASLQRAVGELGYAKPTPIQALALPPAL-QGRDVLGAAQTGSGKTA 59
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 286
AF LPI+QRL + P+G RAL++ PTRELA Q+ + +A
Sbjct: 60 AFLLPILQRL-------------------QGLPRGKTRALVLAPTRELAAQIEESALALA 100
Query: 287 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
K +VRV + GG+S + QE+ + +L++ TPGRL + + L L VLD
Sbjct: 101 KFTDVRVASVFGGVSMKPQEKAFRGGTDLIIATPGRLLDHF---QHPYARLEALEVLVLD 157
Query: 347 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
EADRM++ G +++ ++ LP +RQTL FSAT+
Sbjct: 158 EADRMLDMGFLPDIRRVLRHLP------------------------ARRQTLFFSATM 191
>gi|342218233|ref|ZP_08710855.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
135-E]
gi|341590668|gb|EGS33904.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
135-E]
Length = 515
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 131/233 (56%), Gaps = 46/233 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
+ + L + +++++ +GF+EPTPIQ IP A QG+D+IG A+TG+GKT AFG+P
Sbjct: 2 LEKFQNLNISTTILQALNTMGFEEPTPIQAEAIPVAL-QGQDMIGQAQTGTGKTAAFGIP 60
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
+++++L + + +++ ++++PTRELA+QV + L +A+ ++
Sbjct: 61 VLEKILASSKTS------------------NVQTIVLSPTRELAMQVAEELNHLAQYTSI 102
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ +PI GG E+Q R L+ P+++V TPGRL + M G HL E+ T+ VLDEAD M
Sbjct: 103 QALPIYGGQDMERQLRRLRKHPQIIVATPGRLIDHMKRGTIHLDEISTI---VLDEADEM 159
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++ G ++ +I+ P T RQTL+FSAT+
Sbjct: 160 LDMGFIDDIHTIMSATPET------------------------RQTLLFSATM 188
>gi|33150748|gb|AAP97252.1|AF134475_1 ATP-dependent RNA helicase [Homo sapiens]
Length = 486
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 115/210 (54%), Gaps = 21/210 (10%)
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 315
K PK L ++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+R+L RPE+
Sbjct: 8 KAYPKRPLLGRVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEI 67
Query: 316 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 375
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML N+
Sbjct: 68 VVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEML------ND 121
Query: 376 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 435
Q KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 122 SQYN-------------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMDKTAKLDLLM 166
Query: 436 ERAGMRANVAIVDLTNVSVLANKLEESFIE 465
++ GMR ++DLT L E+ I
Sbjct: 167 QKIGMRGKPKVIDLTRNEATVETLTETKIH 196
>gi|366996959|ref|XP_003678242.1| hypothetical protein NCAS_0I02320 [Naumovozyma castellii CBS 4309]
gi|342304113|emb|CCC71900.1| hypothetical protein NCAS_0I02320 [Naumovozyma castellii CBS 4309]
Length = 731
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 45/309 (14%)
Query: 169 STEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
S + W +L +M+ + LGF +PT IQ IP A + +DI+G A TGSGKTLA
Sbjct: 147 SVDLPDWTKLATFSTTIMQGLQSLGFTKPTEIQAKAIPFAL-KNEDIMGKASTGSGKTLA 205
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
+G+PI++ L++ G ++ K ALI TPTRELA QVT HL+ ++K
Sbjct: 206 YGIPILENLIKTF----------GNDSNKPI------ALIFTPTRELAQQVTKHLQNISK 249
Query: 288 GI----NVRVVPIVGGMSTEKQERLLKA--RPELVVGTPGRLWELMSGGEKHLVELHTLS 341
++ + GG+S +KQERLLK ++V+ TPGR EL+ + + +
Sbjct: 250 LFLKNSQYSILSLTGGLSIQKQERLLKYDNSGKIVIATPGRFLELLEKNNELVERFAQID 309
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 401
VLDEADR++++GHF E + I+ L GQ + L+ QT+++S
Sbjct: 310 TLVLDEADRLLQDGHFDEFEKILKYL--------GQKRKEM------KLKNTYWQTMIYS 355
Query: 402 ATIALSADFRKKLKHGSLKLKQSVNGLNS-----IETLSERAGMRANVAIVDLTNVSVLA 456
AT S D KL + S K + V +S + L + ++ ++D+ ++
Sbjct: 356 AT--FSIDLFDKLANSSWKSNKKVKQYDSEMETVLHHLMNKIHFKSKPILIDMNPNQKIS 413
Query: 457 NKLEESFIE 465
++++ES IE
Sbjct: 414 SQIKESLIE 422
>gi|351698834|gb|EHB01753.1| ATP-dependent RNA helicase DDX24 [Heterocephalus glaber]
Length = 989
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 23/212 (10%)
Query: 241 EKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 298
E G++ +E ++ Y PK L L++TPTRELA+QV H+ VAK ++ +VG
Sbjct: 364 ELTGELKQELDDKIATYKTHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVG 423
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHSHLSNLRQLRCLVVDEADRMVEKGHFA 483
Query: 359 ELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 418
EL +++ML S KRQTLVFSAT+ L +L H
Sbjct: 484 ELSQLLEML-------------------SDSQYNPKRQTLVFSATLTLVHQAPARLLHK- 523
Query: 419 LKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
K + ++ ++ L ++ GMR ++DLT
Sbjct: 524 -KHVKKMDKTAKLDLLMQKIGMRGKPKVIDLT 554
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLVPAIRDRLDILGAAETGSGKTLAFAI 249
Query: 231 PIMQRLLEEREK 242
P++ +L+ ++K
Sbjct: 250 PMIHAVLQWQKK 261
>gi|40018540|ref|NP_954550.1| ATP-dependent RNA helicase DDX24 [Rattus norvegicus]
gi|33638101|gb|AAQ24160.1| DEAD box polypeptide 24 [Rattus norvegicus]
gi|67677909|gb|AAH97262.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Rattus norvegicus]
gi|149025406|gb|EDL81773.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Rattus norvegicus]
Length = 851
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 119/214 (55%), Gaps = 23/214 (10%)
Query: 239 EREKAGKMLEEKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
+ E+AGK+ +E ++ Y P+ L L++TPTRELA+QV H+ VAK + +
Sbjct: 356 DEEQAGKLKQELCDQIAVYKVHPRRPLLGLVLTPTRELAVQVRQHIDAVAKFTGINTAIL 415
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
VGGMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E H
Sbjct: 416 VGGMSTQKQQRMLNRHPEIVIATPGRLWELIKEKHPHLSNLRQLRCLVIDEADRMVEKDH 475
Query: 357 FRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 416
F EL +++ML N+ Q RQTLVFSAT+ L ++ H
Sbjct: 476 FAELSQLLEML------NDSQYN-------------PNRQTLVFSATLTLVHQAPARILH 516
Query: 417 GSLKLKQSVNGLNSIETLSERAGMRANVAIVDLT 450
K + ++ ++ L ++ GMR ++DLT
Sbjct: 517 K--KHVKKMDKTAKLDLLMQKIGMRGKPKVIDLT 548
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 190 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 231 PIMQRLLE 238
P++ +L+
Sbjct: 250 PMIHSVLQ 257
>gi|336115431|ref|YP_004570198.1| DEAD/DEAH box helicase [Bacillus coagulans 2-6]
gi|335368861|gb|AEH54812.1| DEAD/DEAH box helicase domain protein [Bacillus coagulans 2-6]
Length = 475
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 130/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL L P ++K++ R+GF+E +PIQ A IP QGKDIIG A+TG+GKT AFG+P+++
Sbjct: 4 FSELNLSPAILKAVKRMGFEEASPIQAATIPLTM-QGKDIIGQAQTGTGKTAAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + R + +++ +II PTRELA+QV++ L + + V V+
Sbjct: 63 KI-DHRSR-------------------NIQGIIIAPTRELAIQVSEELYRIGQYSRVHVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK P+++VGTPGR+ + + G L +HTL VLDEAD M+
Sbjct: 103 AVYGGQDISRQIRALKNHPQIIVGTPGRILDHIHRGTLKLDHVHTL---VLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P K RQT++FSAT+
Sbjct: 160 GFIDDIEAILSTVP------------------------KDRQTMLFSATM 185
>gi|257896496|ref|ZP_05676149.1| helicase [Enterococcus faecium Com12]
gi|257833061|gb|EEV59482.1| helicase [Enterococcus faecium Com12]
Length = 503
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 134/259 (51%), Gaps = 53/259 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-VGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIIFQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQSVNGL 428
F K H +K K+ L
Sbjct: 195 FMKSPHHVKIKAKEMTADL 213
>gi|145257496|ref|XP_001401758.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Aspergillus
niger CBS 513.88]
gi|143359821|sp|A2QIL2.1|PRP28_ASPNC RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|134058672|emb|CAK38656.1| unnamed protein product [Aspergillus niger]
Length = 810
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 152/273 (55%), Gaps = 20/273 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W+E L LM+ I R+G+KEPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++
Sbjct: 373 SWDESNLPKRLMELINRVGYKEPTPIQRAAIPIAM-QNRDLIGVAVTGSGKTAAFLLPLL 431
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ E + +E E G A+++ PTRELA Q+ K+ + V
Sbjct: 432 CYIAEL---------PRIDEFEWRKADGPY-AIVLAPTRELAQQIEIEAKKFTGPLGFNV 481
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI+
Sbjct: 482 VSIVGGHSLEEQAYSLRDGAEIIIATPGRLVDCI---ERRILVLSQCCYVIMDEADRMID 538
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSATIALSAD-- 409
G + I+D LP++N + + + ++ ++ Q + RQT++++AT+ + +
Sbjct: 539 LGFEEPVNKILDALPVSNEKPDSEDAENPLAMSRHINHDQHRYRQTMMYTATMPTAVERI 598
Query: 410 FRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 442
RK L+ ++ S +++T+ +R M A
Sbjct: 599 ARKYLRRPAIVTIGSAG--EAVDTVEQRVEMIA 629
>gi|428164262|gb|EKX33294.1| hypothetical protein GUITHDRAFT_81602 [Guillardia theta CCMP2712]
Length = 679
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 145/291 (49%), Gaps = 53/291 (18%)
Query: 159 EEELVSEAEI-STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
E E +A + S E ++ EL L L+K++ LGF +PT IQ IP A QGKD+ +
Sbjct: 98 EREYFDDAPVQSAETSSFQELHLSRPLLKAVSSLGFIKPTVIQSMVIPVAL-QGKDVCAS 156
Query: 218 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELA 275
+ TGSGKT AF LPI++RLL Y P+ R L++TPTRELA
Sbjct: 157 SRTGSGKTAAFALPILERLL-------------------YRPRRVAATRVLVLTPTRELA 197
Query: 276 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 335
+Q ++++A ++R ++GG+ + QE L+ +P++VV TPGR+ + + +
Sbjct: 198 VQAHAMMEKLAAFTDIRCYIVIGGVKNQLQETELRKKPDVVVATPGRMIDHLRNAPG--I 255
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
L VLDEADR++E G E+Q ++ M P ++R
Sbjct: 256 GFEALEILVLDEADRLLEMGFTEEVQELVKMCP------------------------QQR 291
Query: 396 QTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRANVAI 446
QT++FSAT+ D KL SL+ V SI T E G VA+
Sbjct: 292 QTMLFSATMTHDVD---KLAAFSLRRPVRVTADGSIRT-DETQGTLNKVAV 338
>gi|294142025|ref|YP_003558003.1| DEAD/DEAH box helicase [Shewanella violacea DSS12]
gi|293328494|dbj|BAJ03225.1| ATP-dependent RNA helicase, DEAD box family [Shewanella violacea
DSS12]
Length = 427
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 127/230 (55%), Gaps = 35/230 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++ L L P L++ + LG+ +PTPIQ IPA G+DI+ A+TGSGKT AF LPI+
Sbjct: 13 FSSLSLRPELLQVLTELGYTQPTPIQTQAIPAIL-AGQDIMAGAQTGSGKTAAFALPILN 71
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L ++ +K EA+ A K +RAL++TPTRELALQV + AK V+
Sbjct: 72 KL------TAQICLQK-TEAQDSADKPAIRALVLTPTRELALQVHGSFVKYAKLTQVKSA 124
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG+S + Q ++L A +++V TPGRL + + G + L+ L F V DEADRM++
Sbjct: 125 LVYGGVSIDAQAQILAAGVDILVATPGRLLDHLRRGS---LNLNQLEFLVFDEADRMLDM 181
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E+ +I+ LP K RQTL+FSAT
Sbjct: 182 GFKDEIDAIVKQLP------------------------KTRQTLLFSATF 207
>gi|357013855|ref|ZP_09078854.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
elgii B69]
Length = 433
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 132/231 (57%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L P ++K++ + + +PTPIQ+ IP G+D+ G A+TG+GKT AF LPI+Q
Sbjct: 3 FEQLKLIPPILKALAKENYTQPTPIQEQAIPPVL-AGRDLFGCAQTGTGKTAAFLLPIIQ 61
Query: 235 RL-LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
L ++R +GK + +R+LI+TPTRELA+Q++D+ K + +N+R
Sbjct: 62 LLSAQQRRPSGKRV---------------IRSLILTPTRELAIQISDNFKAYGRFLNLRS 106
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
IVGG+S + QE+ L+ ++++ TPGRL +LM+ G +L + VLDEADRM++
Sbjct: 107 AVIVGGVSQKAQEQALEQGMDILIATPGRLIDLMNQG---FADLRHVQILVLDEADRMLD 163
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II LP KRQTL FSAT+
Sbjct: 164 MGFIHDMRRIIAKLP------------------------AKRQTLFFSATM 190
>gi|195579916|ref|XP_002079802.1| GD24145 [Drosophila simulans]
gi|194191811|gb|EDX05387.1| GD24145 [Drosophila simulans]
Length = 641
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 146/238 (61%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +WNE ++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 208 IPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 266
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 267 FLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFGQ 315
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 316 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 372
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F+AT+
Sbjct: 373 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATM 430
>gi|16768302|gb|AAL28370.1| GM01081p [Drosophila melanogaster]
Length = 641
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 146/238 (61%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +WNE ++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 208 IPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 266
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 267 FLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFGQ 315
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 316 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 372
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F+AT+
Sbjct: 373 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATM 430
>gi|390332079|ref|XP_781784.3| PREDICTED: probable ATP-dependent RNA helicase DDX49
[Strongylocentrotus purpuratus]
Length = 478
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 122/231 (52%), Gaps = 47/231 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L LH L++ +G K+PTPIQ CIP +G D IG A+TGSGKT AF LPI+
Sbjct: 13 SFSGLGLHDWLVRQCEAVGIKQPTPIQHNCIPPIL-KGSDCIGCAKTGSGKTAAFALPIL 71
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q+L E+ P G + L++TPTREL +Q+ + + + K I +RV
Sbjct: 72 QKLSED-------------------PYG-VFGLVVTPTRELGIQIAEQFRVLGKPIGLRV 111
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
++GG+ +Q R L +P +V+ TPGRL + + +LH + F VLDEADR++E
Sbjct: 112 TVVIGGIDMVEQGRELSKKPHIVIATPGRLADHIKSTST--FDLHAIKFLVLDEADRLLE 169
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+L+ I D LP KRQTL+FSATI
Sbjct: 170 GNFGPDLEVIFDFLP------------------------AKRQTLLFSATI 196
>gi|156549811|ref|XP_001606554.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Nasonia
vitripennis]
Length = 456
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 140/276 (50%), Gaps = 64/276 (23%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
TEF +L + ++ + +G K+PTPIQ+ CIPA GKD IG A+TGSGKTLAF
Sbjct: 2 TEF---TDLNISSWIIDQLKLIGVKKPTPIQQNCIPAIL-SGKDCIGCAKTGSGKTLAFA 57
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 289
LPI+Q+L E+ P G + AL++TPTRELA Q+ D + K I
Sbjct: 58 LPILQKLSED-------------------PYG-IFALVLTPTRELAFQIGDQFAAIGKTI 97
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS-----FFV 344
N++ IVGGM Q + L P +VV TPGRL + HL +T S F V
Sbjct: 98 NLKKCTIVGGMDMVVQGQELARHPHIVVATPGRLAD-------HLESCNTFSLARIKFLV 150
Query: 345 LDEADRMIENGHFRE-LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 403
LDEADR++ GHF E L I LP K RQ+L+FSAT
Sbjct: 151 LDEADRLL-GGHFDEQLSVIFKALP------------------------KNRQSLLFSAT 185
Query: 404 IALSADFRKKLKHGSLKLKQSVN--GLNSIETLSER 437
I + D K++ + +S + G+ +++ L +R
Sbjct: 186 ITDALDKVKQVSTKEWFIWESTDDSGVATVKELDQR 221
>gi|399055613|ref|ZP_10743308.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
gi|398046822|gb|EJL39406.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
Length = 529
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 49/230 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+++ LH ++++I+ +GF+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVL-AGGDLIGQAQTGTGKTAAFGIPLV- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK P ++A+++TPTRELA+QV L ++K VR +
Sbjct: 62 --------------------EKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTL 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG S Q R L+ ++VVGTPGR+ + + L +HTL VLDEAD M++
Sbjct: 102 PIYGGQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDHVHTL---VLDEADEMLDM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++II +P ++RQTL+FSAT+
Sbjct: 159 GFIEDIETIITHMP------------------------EERQTLLFSATM 184
>gi|223043911|ref|ZP_03613952.1| cold-shock deAd box protein a (atp-dependent rna helicasedead)
[Staphylococcus capitis SK14]
gi|314934151|ref|ZP_07841512.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
caprae C87]
gi|417906606|ref|ZP_12550387.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus capitis
VCU116]
gi|222442626|gb|EEE48730.1| cold-shock deAd box protein a (atp-dependent rna helicasedead)
[Staphylococcus capitis SK14]
gi|313653056|gb|EFS16817.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
caprae C87]
gi|341597608|gb|EGS40154.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus capitis
VCU116]
Length = 511
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 135/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDRTVQTLESMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG NV+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQNVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P S+Q RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------SDQ--------------RQTMLFSATM 185
>gi|153955940|ref|YP_001396705.1| RNA helicase [Clostridium kluyveri DSM 555]
gi|219856282|ref|YP_002473404.1| hypothetical protein CKR_2939 [Clostridium kluyveri NBRC 12016]
gi|146348798|gb|EDK35334.1| Predicted RNA helicase [Clostridium kluyveri DSM 555]
gi|219570006|dbj|BAH07990.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 524
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 50/232 (21%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++N+L LHP + ++I +GF+EP+ IQ IP +G DIIG A+TG+GKTLAFG P++
Sbjct: 5 SFNDLNLHPKVFEAIDNMGFEEPSQIQAESIPVIL-EGNDIIGQAQTGTGKTLAFGAPML 63
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKG-HLRALIITPTRELALQVTDHLKEVAKGINVR 292
++ PK H+ ALI+TPTRELA+QV D L +AK + +
Sbjct: 64 SKI---------------------TPKNKHISALILTPTRELAIQVNDELSRIAKFMKIL 102
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
++PI GG E+Q + LK +VVGTPGR+ + + + ++L + F +DEAD M+
Sbjct: 103 LLPIYGGQPIERQIKSLKRGINIVVGTPGRILDHL---HRKTLDLSNIEFLTIDEADEML 159
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+ G +++ II SN RQTL+FSAT+
Sbjct: 160 DMGFIEDIEEII------KASNPN------------------RQTLLFSATM 187
>gi|289550302|ref|YP_003471206.1| cold-shock DEAD-box protein A [Staphylococcus lugdunensis HKU09-01]
gi|315660238|ref|ZP_07913093.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
lugdunensis M23590]
gi|385783930|ref|YP_005760103.1| putative helicase [Staphylococcus lugdunensis N920143]
gi|418415253|ref|ZP_12988459.1| hypothetical protein HMPREF9308_01624 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418635602|ref|ZP_13197976.1| DEAD/DEAH box helicase [Staphylococcus lugdunensis VCU139]
gi|289179834|gb|ADC87079.1| Cold-shock DEAD-box protein A [Staphylococcus lugdunensis HKU09-01]
gi|315494665|gb|EFU83005.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
lugdunensis M23590]
gi|339894186|emb|CCB53451.1| putative helicase [Staphylococcus lugdunensis N920143]
gi|374841707|gb|EHS05164.1| DEAD/DEAH box helicase [Staphylococcus lugdunensis VCU139]
gi|410875260|gb|EKS23185.1| hypothetical protein HMPREF9308_01624 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 504
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 132/230 (57%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L + ++++ +GFKEPTPIQK IP A +G+DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKDLGISEKTVQTLENMGFKEPTPIQKDSIPYAL-EGRDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G NV+VV
Sbjct: 62 --------------------EKVVNKSGVQSLILAPTRELAMQVAEQLREFSRGQNVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM ++Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIDRQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|195115088|ref|XP_002002099.1| GI14145 [Drosophila mojavensis]
gi|193912674|gb|EDW11541.1| GI14145 [Drosophila mojavensis]
Length = 837
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 146/238 (61%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W+E P +++ I +G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 404 IPNPIRSWSESGFPPEIIEIIDSVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 462
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 463 FLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETIKFGQ 511
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 512 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 568
Query: 348 ADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 569 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDEKKLMENFYTKKKYRQTVMFTATM 626
>gi|433545971|ref|ZP_20502309.1| ATP-dependent RNA helicase [Brevibacillus agri BAB-2500]
gi|432182587|gb|ELK40150.1| ATP-dependent RNA helicase [Brevibacillus agri BAB-2500]
Length = 549
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 49/230 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+++ LH ++++I+ +GF+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P++
Sbjct: 24 FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVL-AGGDLIGQAQTGTGKTAAFGIPLV- 81
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK P ++A+++TPTRELA+QV L ++K VR +
Sbjct: 82 --------------------EKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTL 121
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG S Q R L+ ++VVGTPGR+ + + L +HTL VLDEAD M++
Sbjct: 122 PIYGGQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDHVHTL---VLDEADEMLDM 178
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++II +P ++RQTL+FSAT+
Sbjct: 179 GFIEDIETIITHMP------------------------EERQTLLFSATM 204
>gi|392597372|gb|EIW86694.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 750
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 148/312 (47%), Gaps = 67/312 (21%)
Query: 98 SSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDD 157
S ED G DED G Q ++ +L+ Q K +K+ E+S T + P
Sbjct: 128 SGERSEDFGSASSDEDDEG-QSDEVSDLETQAEKDRKRA-------FFEDSDTTT--PAH 177
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
A ++ + L L K++ LGF +PTPIQ A IP A GKDI+G
Sbjct: 178 A---------------SFLTMNLSRPLQKALTTLGFNKPTPIQVAAIPVALI-GKDIVGN 221
Query: 218 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQ 277
A TGSGKT AF +P+++RLL EKG+ A R LI+ PTREL +Q
Sbjct: 222 AVTGSGKTAAFVIPMLERLL---------YREKGKSA------AATRCLILVPTRELGVQ 266
Query: 278 VTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 337
+ +++A + R+ +VGG+S + QE L+ RP++V+ TPGRL + + L
Sbjct: 267 CYEVAQKLAAYTDARIALVVGGLSLKSQEAALRTRPDVVIATPGRLVDHIHNSPS--FNL 324
Query: 338 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQT 397
L VLDEADRM+ G EL II P K RQT
Sbjct: 325 DALDILVLDEADRMLSEGFADELSEIIKACP------------------------KSRQT 360
Query: 398 LVFSATIALSAD 409
++FSAT+ S D
Sbjct: 361 MLFSATMTDSVD 372
>gi|255711296|ref|XP_002551931.1| KLTH0B03278p [Lachancea thermotolerans]
gi|238933309|emb|CAR21493.1| KLTH0B03278p [Lachancea thermotolerans CBS 6340]
Length = 739
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 162/317 (51%), Gaps = 63/317 (19%)
Query: 97 RSSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPD 156
+S+ +E D D +GDE G + G + K+ +G++ + +VS+ D
Sbjct: 149 QSATHEGDATDSEGDESG----------VDEDSGVESDKQTEGQEALMTAGNGSVSDIED 198
Query: 157 DAEE---ELVSEAEISTE-----FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAA 208
D+EE E + E STE +N L L ++K + L + +P+PIQ A IP A
Sbjct: 199 DSEEAKAEFYALEEESTEAKKTVHTNFNSLSLSRPVLKGLGALNYVKPSPIQSATIPIAL 258
Query: 209 HQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALII 268
GKDII A TGSGKT A+ +PI++RLL K A R +++
Sbjct: 259 -LGKDIIAGAVTGSGKTAAYMIPIIERLL-----------------YKPAQIASTRVIVL 300
Query: 269 TPTRELALQVTDHLKEVAKGIN-VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELM 327
TPTRELA+QV+D ++AK +N + VGG++ +QE+ L++RP++V+ TPGRL + +
Sbjct: 301 TPTRELAIQVSDVGAKLAKFVNGISFGLAVGGLNLRQQEQTLRSRPDIVIATPGRLIDHI 360
Query: 328 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTV 387
V+ ++ V+DEADRM+E G EL I+ ++P
Sbjct: 361 RNSASFNVD--SVEILVIDEADRMLEEGFQDELNEIMSLIP------------------- 399
Query: 388 SSLQRKKRQTLVFSATI 404
KRQTL+FSAT+
Sbjct: 400 -----SKRQTLLFSATM 411
>gi|212638043|ref|YP_002314563.1| ATP-dependent RNA helicase [Anoxybacillus flavithermus WK1]
gi|212559523|gb|ACJ32578.1| ATP-dependent RNA helicase [Anoxybacillus flavithermus WK1]
Length = 471
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 130/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NE L P LMK++ ++GF+E TPIQ A IP + Q +D+IG A+TG+GKT AFG+P+++
Sbjct: 7 FNEFGLSPELMKAVSKMGFEEATPIQAATIPLSL-QNRDVIGQAQTGTGKTAAFGIPLIE 65
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + +A ++A+++ PTRELA+QV++ L ++ VRV+
Sbjct: 66 KI------------DMNNDA--------VQAIVVAPTRELAIQVSEELYKIGSTKRVRVL 105
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG E+Q R LK P ++VGTPGR+ + + L +HT+ VLDEAD M+
Sbjct: 106 PIYGGQDIERQIRALKKHPHIIVGTPGRILDHIQRRTLRLQHVHTV---VLDEADEMLNM 162
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P +RQTL+FSAT+
Sbjct: 163 GFVEDIEAILSHVP------------------------TERQTLLFSATM 188
>gi|350632267|gb|EHA20635.1| hypothetical protein ASPNIDRAFT_190556 [Aspergillus niger ATCC
1015]
Length = 795
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 152/273 (55%), Gaps = 20/273 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W+E L LM+ I R+G+KEPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++
Sbjct: 358 SWDESNLPKRLMELINRVGYKEPTPIQRAAIPIAM-QNRDLIGVAVTGSGKTAAFLLPLL 416
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ E + +E E G A+++ PTRELA Q+ K+ + V
Sbjct: 417 CYIAEL---------PRIDEFEWRKADGPY-AIVLAPTRELAQQIEIEAKKFTGPLGFNV 466
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI+
Sbjct: 467 VSIVGGHSLEEQAYSLRDGAEIIIATPGRLVDCI---ERRILVLSQCCYVIMDEADRMID 523
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSATIALSAD-- 409
G + I+D LP++N + + + ++ ++ Q + RQT++++AT+ + +
Sbjct: 524 LGFEEPVNKILDALPVSNEKPDSEDAENPLAMSRHINHDQHRYRQTMMYTATMPTAVERI 583
Query: 410 FRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 442
RK L+ ++ S +++T+ +R M A
Sbjct: 584 ARKYLRRPAIVTIGSAG--EAVDTVEQRVEMIA 614
>gi|358053682|ref|ZP_09147418.1| putative helicase [Staphylococcus simiae CCM 7213]
gi|357256869|gb|EHJ07190.1| putative helicase [Staphylococcus simiae CCM 7213]
Length = 507
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 130/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGVSDNTVQTLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G NV+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQNVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P ++RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIPA-----------------------QQRQTMLFSATM 185
>gi|328865714|gb|EGG14100.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 1076
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 125/238 (52%), Gaps = 55/238 (23%)
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLL 237
+ LH L K++ + GFK+PTPIQ+ IP +G+D++G A TGSGKT AF +P++Q+L
Sbjct: 273 MDLHKFLFKAVMKKGFKQPTPIQRLTIPLIL-EGQDVVGMARTGSGKTAAFVIPMIQKLA 331
Query: 238 EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIV 297
+ K G RA+I++PTRELALQ +KE++ G ++R IV
Sbjct: 332 QHSHKVG------------------ARAIILSPTRELALQTYRVVKELSSGSDLRSCVIV 373
Query: 298 GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE----LHTLSFFVLDEADRMIE 353
GG + Q L P++++ TPGRL HL E LHT+ + V DEADR+ E
Sbjct: 374 GGDNMADQFTELARNPDIIIATPGRLVH-------HLTEVNMGLHTVQYIVFDEADRLFE 426
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-ALSADF 410
G +LQ II L + RQTL+FSAT+ ++ A+F
Sbjct: 427 MGFADQLQEIITKLSPS------------------------RQTLLFSATLPSMLAEF 460
>gi|254578440|ref|XP_002495206.1| ZYRO0B05852p [Zygosaccharomyces rouxii]
gi|238938096|emb|CAR26273.1| ZYRO0B05852p [Zygosaccharomyces rouxii]
Length = 751
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 167/322 (51%), Gaps = 50/322 (15%)
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPL---LMKSIYRLGFKEPTPIQKACIPAAAHQG 211
P+ EL E S E W ++ PL ++ + + GF +PT IQK +P A +
Sbjct: 166 PNVFNSELNLEDFSSPELPEWQ--KIAPLSFTVLNGLSQQGFTKPTDIQKEVLPLAL-KN 222
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 271
+DI+G A TGSGKTLA+G+P+++ L+ E + + + LI TPT
Sbjct: 223 EDIMGKAATGSGKTLAYGIPLLESLVHEPDHSKSI------------------GLIFTPT 264
Query: 272 RELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQERLLKAR--PELVVGTPGRLWE 325
RELA QVT HLK++ + I ++P+ GG+S +KQER+LK +VV TPGR E
Sbjct: 265 RELAQQVTQHLKKLGQLIIQKSKFAILPLTGGLSIQKQERILKYENSARIVVATPGRFLE 324
Query: 326 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 385
L+ + ++ VLDEADR++++GHF E + I+ +L G+ +
Sbjct: 325 LIEKNIDLIPRFARINTLVLDEADRLLQDGHFDEFEKILKLL---GGARK---------- 371
Query: 386 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK-LKQSVNGLNSI-ETLSERAGMRAN 443
S + QT++FSAT +LS KL S K LK+ + + + + L ++ ++
Sbjct: 372 ---SFDKTGWQTMIFSATFSLS--LFSKLATASWKSLKKDEDEMEQVLKHLMQKIRFKSK 426
Query: 444 VAIVDLTNVSVLANKLEESFIE 465
IVD + + +++ ES IE
Sbjct: 427 PVIVDTNSEEKIKSQIRESLIE 448
>gi|195147728|ref|XP_002014827.1| GL19380 [Drosophila persimilis]
gi|194106780|gb|EDW28823.1| GL19380 [Drosophila persimilis]
Length = 437
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 144/238 (60%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +WNE P ++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 4 IPNPIRSWNESGFPPEIIDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 62
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 63 FLIPLLSWI----QSLPKI--ERLEDVDQ-GP----YAIIMAPTRELAQQIEEETIKFGQ 111
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ E + L+ ++ VLDE
Sbjct: 112 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVL---ENRYLVLNQCTYIVLDE 168
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + + + + + + +KK RQT++F+AT+
Sbjct: 169 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDENKLMENFYTKKKYRQTVMFTATM 226
>gi|410659385|ref|YP_006911756.1| Cold-shock DEAD-box protein A [Dehalobacter sp. DCA]
gi|410662371|ref|YP_006914742.1| Cold-shock DEAD-box protein A [Dehalobacter sp. CF]
gi|409021740|gb|AFV03771.1| Cold-shock DEAD-box protein A [Dehalobacter sp. DCA]
gi|409024727|gb|AFV06757.1| Cold-shock DEAD-box protein A [Dehalobacter sp. CF]
Length = 471
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 53/256 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E+ L +L ++I +GF+E TPIQ+ IP +GKDIIG A+TG+GKT AFG+P+++
Sbjct: 4 FFEIGLSSVLTQAISEMGFEETTPIQERTIPLVL-EGKDIIGQAQTGTGKTAAFGIPMIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
R+ +RE ++AL++TPTRELA+QV + L + + VR +
Sbjct: 63 RMKPDRES--------------------IKALVVTPTRELAIQVAEELNRIGQFKGVRSL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG ++Q R L+ RP+++VGTPGRL + M + + L + VLDEAD M+
Sbjct: 103 PIYGGQDIDRQIRSLRNRPQIIVGTPGRLMDHM---RRRTIRLQQVETVVLDEADEMLSM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++++I+ +P ++RQTL+FSAT+ L+
Sbjct: 160 GFVEDIENILKEVP------------------------EQRQTLLFSATMPKSILDLAQR 195
Query: 410 FRKKLKHGSLKLKQSV 425
F + ++ S+K K+ +
Sbjct: 196 FMQNPEYISMKTKEII 211
>gi|300703503|ref|YP_003745105.1| ATP-dependent RNA helicase, dead-box family [Ralstonia solanacearum
CFBP2957]
gi|299071166|emb|CBJ42480.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
CFBP2957]
Length = 495
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 134/258 (51%), Gaps = 48/258 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
S FD + LHP +++++ G+ PTPIQ A IP G+D++GAA+TG+GKT F
Sbjct: 14 SVTFDTFG---LHPDILRALTESGYTRPTPIQAAAIPVVV-GGRDVMGAAQTGTGKTAGF 69
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAK 287
LPI+Q LL E + +P H +RALI+TPTRELA QV D++ + AK
Sbjct: 70 SLPIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYAK 116
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+R + GG+ Q L+ E++V TPGRL + + ++ V L + VLDE
Sbjct: 117 YTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLDE 173
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 174 ADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSPE 209
Query: 408 ADFRKKLKHGSLKLKQSV 425
KKL L+ Q++
Sbjct: 210 I---KKLAASYLRHPQTI 224
>gi|207743814|ref|YP_002260206.1| atp-dependent rna helicase protein [Ralstonia solanacearum IPO1609]
gi|421897757|ref|ZP_16328124.1| atp-dependent rna helicase protein [Ralstonia solanacearum MolK2]
gi|206588963|emb|CAQ35925.1| atp-dependent rna helicase protein [Ralstonia solanacearum MolK2]
gi|206595214|emb|CAQ62141.1| atp-dependent rna helicase protein [Ralstonia solanacearum IPO1609]
Length = 495
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 134/258 (51%), Gaps = 48/258 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
S FD + LHP +++++ G+ PTPIQ A IP G+D++GAA+TG+GKT F
Sbjct: 14 SVTFDTFG---LHPDILRALTESGYTRPTPIQAAAIPVVV-GGRDVMGAAQTGTGKTAGF 69
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAK 287
LPI+Q LL E + +P H +RALI+TPTRELA QV D++ + AK
Sbjct: 70 SLPIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYAK 116
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+R + GG+ Q L+ E++V TPGRL + + ++ V L + VLDE
Sbjct: 117 YTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLDE 173
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 174 ADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSPE 209
Query: 408 ADFRKKLKHGSLKLKQSV 425
KKL L+ Q++
Sbjct: 210 I---KKLAASYLRHPQTI 224
>gi|346979571|gb|EGY23023.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Verticillium
dahliae VdLs.17]
Length = 683
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 130/231 (56%), Gaps = 17/231 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+E L L+ ++R+G+ EPTPIQ+A IP A Q +D+IG A TGSGKT +F LP++
Sbjct: 260 WDESGLPSRLLDIVHRVGYNEPTPIQRAAIPIAL-QARDLIGVAVTGSGKTASFLLPLLV 318
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + L GE + P G LI+ PTREL Q+ + A + RVV
Sbjct: 319 YISD--------LPPLGEMNKNDGPYG----LILAPTRELVQQIESEANKFATPLGFRVV 366
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 367 SIVGGHSLEEQAFALRNGAEIIVATPGRLVDCI---ERRLLVLGQCCYVIMDEADRMIDL 423
Query: 355 GHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G + I+D LP+TN + ++E Q + + RQT++++AT+
Sbjct: 424 GFEEPVNKILDALPVTNEKPDTDEAENAQLMKRYLGGKDRYRQTMMYTATM 474
>gi|302833349|ref|XP_002948238.1| hypothetical protein VOLCADRAFT_80160 [Volvox carteri f.
nagariensis]
gi|300266458|gb|EFJ50645.1| hypothetical protein VOLCADRAFT_80160 [Volvox carteri f.
nagariensis]
Length = 836
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 135/254 (53%), Gaps = 53/254 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ +L L L+K++ LG+K PTPIQ ACIP A G+DI G+A TGSGKT AF LP +
Sbjct: 175 SFADLNLSRPLLKAVEALGYKTPTPIQAACIPLAL-AGRDICGSAVTGSGKTAAFALPFL 233
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINV 291
+RLL + P+G L++TPTRELA+Q+ ++++A+ +V
Sbjct: 234 ERLL-------------------HRPRGLAATYVLVLTPTRELAVQIHSMIEKLAQFTDV 274
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
V IVGG+S Q L+ PE+VV TPGRL + + + V L L+ VLDEADR+
Sbjct: 275 TVALIVGGLSLSVQAATLRKLPEVVVATPGRLIDHLRNSQS--VGLEDLAVLVLDEADRL 332
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 411
+E G E+ ++ P KKRQT++FSAT +D
Sbjct: 333 LEMGFRDEVMEVVRCAP------------------------KKRQTMLFSATF---SDQV 365
Query: 412 KKLKHGSLKLKQSV 425
+ L SL LKQ V
Sbjct: 366 RDLV--SLSLKQPV 377
>gi|257064977|ref|YP_003144649.1| DNA/RNA helicase [Slackia heliotrinireducens DSM 20476]
gi|256792630|gb|ACV23300.1| DNA/RNA helicase, superfamily II [Slackia heliotrinireducens DSM
20476]
Length = 657
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 129/236 (54%), Gaps = 48/236 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++E L + ++Y LG++EPTPIQ+ IP +G+D+I AA+TG+GKT AF LP M
Sbjct: 9 FDESGLSATALAAVYDLGYEEPTPIQQQAIPVVL-EGRDLIAAAKTGTGKTAAFALPTMD 67
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALII-TPTRELALQVTDHLKEVAKGINVRV 293
+L YA KG ++I TPTRELA+Q+++ + +AK N RV
Sbjct: 68 KL-------------------PYAGKGEGPVMVIVTPTRELAMQISEVCETIAKRTNHRV 108
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V ++GG+S Q + L++ ++++ TPGRL +LM +H +L + VLDEADRM++
Sbjct: 109 VTLLGGVSYTPQIKKLRSGCDIIIATPGRLLDLM---RQHEADLDLVQVLVLDEADRMLD 165
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
G + ++ I+D P +RQTL+FSATI S D
Sbjct: 166 MGFWPQVSEIVDATP------------------------SERQTLLFSATIDRSQD 197
>gi|384249200|gb|EIE22682.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 662
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 133/247 (53%), Gaps = 46/247 (18%)
Query: 160 EELVSEAEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
E+ ++ T+F A +++L L L+K+ LG+ PTPIQ ACIP A G+DI G+
Sbjct: 102 EDFYAQTPDGTKFSASAFSDLHLSRPLLKACTALGYINPTPIQAACIPLAL-AGRDICGS 160
Query: 218 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQ 277
A TGSGKT AF LP+++RLL + A Y L++TPTRELA+Q
Sbjct: 161 AITGSGKTAAFALPLLERLLFRNRRI----------AATYG-------LVLTPTRELAVQ 203
Query: 278 VTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 337
V + +A+ ++R+ +VGG+S + Q L+ PE+VV TPGRL + + + V L
Sbjct: 204 VHSMITNLAQFTDIRIALVVGGLSLQVQSATLRTSPEVVVATPGRLIDHLRNTQS--VGL 261
Query: 338 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQT 397
L VLDEADR+++ G E++ ++ + P +KRQT
Sbjct: 262 EDLQALVLDEADRLLQMGFSEEIKEVLRLTP------------------------RKRQT 297
Query: 398 LVFSATI 404
L+FSAT+
Sbjct: 298 LLFSATM 304
>gi|389751392|gb|EIM92465.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 812
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 130/248 (52%), Gaps = 42/248 (16%)
Query: 162 LVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETG 221
S+A S ++ + L ++K++ LGF PTPIQ A IP GKD++G A TG
Sbjct: 203 FASDAPSSDTHSSFLTMNLSRPVLKALTTLGFNTPTPIQAATIPVGL-LGKDVVGNAVTG 261
Query: 222 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 281
SGKT AF +P+++RLL +KG++A R LI+ PTRELA+Q +
Sbjct: 262 SGKTAAFIIPMIERLL---------YRDKGKKA------AATRCLILVPTRELAVQCYEV 306
Query: 282 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 341
K++ +++ IVGG+S + QE L+ARP++V+ TPGRL + + L L
Sbjct: 307 GKKLGTHTDIQFCLIVGGLSLKSQEVALRARPDVVIATPGRLIDHLRNSPS--FTLDALD 364
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 401
VLDEADRM+ +G EL II Q+C T RQT++FS
Sbjct: 365 ILVLDEADRMLSDGFADELTEII-----------------QSCPT-------SRQTMLFS 400
Query: 402 ATIALSAD 409
AT+ S D
Sbjct: 401 ATMTDSVD 408
>gi|261418549|ref|YP_003252231.1| DEAD/DEAH box helicase [Geobacillus sp. Y412MC61]
gi|297528577|ref|YP_003669852.1| DEAD/DEAH box helicase [Geobacillus sp. C56-T3]
gi|319765363|ref|YP_004130864.1| DEAD/DEAH box helicase [Geobacillus sp. Y412MC52]
gi|448236523|ref|YP_007400581.1| DEAD-box ATP-dependent RNA helicase [Geobacillus sp. GHH01]
gi|261375006|gb|ACX77749.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. Y412MC61]
gi|297251829|gb|ADI25275.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. C56-T3]
gi|317110229|gb|ADU92721.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. Y412MC52]
gi|445205365|gb|AGE20830.1| DEAD-box ATP-dependent RNA helicase [Geobacillus sp. GHH01]
Length = 467
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L +MK+I R+GF+E TPIQ IP + Q KD+IG A+TG+GKT AFG+PI++
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSL-QNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ G ++AL++ PTRELA+QV++ L ++ VRV+
Sbjct: 63 KV--------------------DVKNGAIQALVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG E+Q R LK P ++VGTPGR+ + ++ G L +HT+ VLDEAD M+
Sbjct: 103 PIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTV---VLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P +RQTL+FSAT+
Sbjct: 160 GFIEDIEAILSHVP------------------------AERQTLLFSATM 185
>gi|386332888|ref|YP_006029057.1| atp-dependent rna helicase protein [Ralstonia solanacearum Po82]
gi|334195335|gb|AEG68520.1| atp-dependent rna helicase protein [Ralstonia solanacearum Po82]
Length = 495
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 134/258 (51%), Gaps = 48/258 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
S FD + LHP +++++ G+ PTPIQ A IP G+D++GAA+TG+GKT F
Sbjct: 14 SVTFDTFG---LHPDILRALTESGYTRPTPIQAAAIPVVV-GGRDVMGAAQTGTGKTAGF 69
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAK 287
LPI+Q LL E + +P H +RALI+TPTRELA QV D++ + AK
Sbjct: 70 SLPIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYAK 116
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+R + GG+ Q L+ E++V TPGRL + + ++ V L + VLDE
Sbjct: 117 YTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLDE 173
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 174 ADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSPE 209
Query: 408 ADFRKKLKHGSLKLKQSV 425
KKL L+ Q++
Sbjct: 210 I---KKLAASYLRHPQTI 224
>gi|241957775|ref|XP_002421607.1| ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
[Candida dubliniensis CD36]
gi|223644951|emb|CAX40951.1| ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
[Candida dubliniensis CD36]
Length = 592
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 135/253 (53%), Gaps = 48/253 (18%)
Query: 155 PDDAEEELVSEAEISTE--FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
P+D EE+ + E ST ++ L+L ++K I L F +PTPIQ A IP A GK
Sbjct: 94 PEDTPEEIANFYEQSTHQSHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIAL-LGK 152
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 272
DI+ A+TGSGKT A+ +PI++RLL Y P + +I+TPTR
Sbjct: 153 DIVAGAQTGSGKTGAYMIPIIERLL-------------------YKPSTSTKVIILTPTR 193
Query: 273 ELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 331
ELALQV + K+++ + N+ + VGG++ +QE LK RP++V+ TPGRL + +
Sbjct: 194 ELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSP 253
Query: 332 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 391
V+ + V+DEADRM+E G EL I+ ++P
Sbjct: 254 SFSVQ--DIQVLVIDEADRMLEEGFQEELTEILSLIP----------------------- 288
Query: 392 RKKRQTLVFSATI 404
+ KRQTL+FSAT+
Sbjct: 289 KHKRQTLLFSATM 301
>gi|322796322|gb|EFZ18887.1| hypothetical protein SINV_00745 [Solenopsis invicta]
Length = 420
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 124/239 (51%), Gaps = 49/239 (20%)
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL 236
L+L+ L+ +G K+PTPIQ+ CIP G+D IG A+TGSGKTLAF LPI+Q+L
Sbjct: 10 HLKLNSWLLAQCKSMGLKKPTPIQENCIPRIL-MGEDCIGCAKTGSGKTLAFALPILQKL 68
Query: 237 LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
E+ P G + AL++TPTRELA Q+ D + K IN++ I
Sbjct: 69 CED-------------------PYG-IFALVLTPTRELAFQIADQFAAIGKVINLKKCVI 108
Query: 297 VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 356
VGGM Q L RP +VV TPGRL + + L + F VLDEADR++ GH
Sbjct: 109 VGGMDMMIQGLELSKRPHIVVATPGRLADHLDSCNTF--SLQKIKFLVLDEADRLL-GGH 165
Query: 357 F-RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
F ++L+ I +LP K++Q L FSAT+ + D KK+
Sbjct: 166 FDKQLKKIFAVLP------------------------KQKQILFFSATMTDTLDKVKKM 200
>gi|444318547|ref|XP_004179931.1| hypothetical protein TBLA_0C06160 [Tetrapisispora blattae CBS 6284]
gi|387512972|emb|CCH60412.1| hypothetical protein TBLA_0C06160 [Tetrapisispora blattae CBS 6284]
Length = 757
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 127/233 (54%), Gaps = 45/233 (19%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPI 232
+ +N L L ++K + LG+ +P+PIQ A IP A GKDII A TGSGKT AF +PI
Sbjct: 236 NTFNTLSLSRPVLKGLAALGYSKPSPIQSAAIPIALL-GKDIIAGAVTGSGKTAAFMIPI 294
Query: 233 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-V 291
++RLL K A R +++TPTRELA+QV+D K+V K +N V
Sbjct: 295 IERLL-----------------YKPAKVTSTRVIVLTPTRELAIQVSDVGKKVGKFVNGV 337
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
VGG++ +QE+ LK+RP++VV TPGR + + V+ ++ V+DEADRM
Sbjct: 338 TFGLAVGGLNLRQQEQQLKSRPDIVVATPGRFIDHIRNSASFNVD--SVEILVIDEADRM 395
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+E+G EL I+ +LP KRQTL+FSAT+
Sbjct: 396 LEDGFQDELNEIMSLLP------------------------SKRQTLLFSATM 424
>gi|365982507|ref|XP_003668087.1| hypothetical protein NDAI_0A06900 [Naumovozyma dairenensis CBS 421]
gi|343766853|emb|CCD22844.1| hypothetical protein NDAI_0A06900 [Naumovozyma dairenensis CBS 421]
Length = 659
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 161/307 (52%), Gaps = 44/307 (14%)
Query: 175 WNELRLHPL-LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
W L L +++ + LGF +PT IQ IP A + DI+G A TGSGKTLA+G+PI+
Sbjct: 71 WTNLAKFSLTILQGLQSLGFTKPTAIQAKAIPYAL-ENADIMGKASTGSGKTLAYGIPIL 129
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA----KGI 289
+ L++ +K + ++ K ALI TPTRELA QVT HL+ ++ K
Sbjct: 130 ENLIKTAKK---------DSSQTDGIKNKPIALIFTPTRELAQQVTKHLQNISQLFLKNS 180
Query: 290 NVRVVPIVGGMSTEKQERLLKARP--ELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
++ + GG+S +KQERLLK ++V+ TPGR EL+ + + VLDE
Sbjct: 181 PYAILSLTGGLSIQKQERLLKYDNSGKIVIATPGRFLELLEKNNDLIERFCQIDTLVLDE 240
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR----QTLVFSAT 403
ADR++++GHF E + I+ L GQ + L+ KK QT+++SAT
Sbjct: 241 ADRLLQDGHFDEFEKILKYL--------GQKRK--------ELKLKKANQYWQTMIYSAT 284
Query: 404 IALSADFRKKLKHGSL----KLKQSVNGLNSI-ETLSERAGMRANVAIVDLTNVSVLANK 458
S D KL + S K+KQ N + ++ L + ++ I+D+ ++++
Sbjct: 285 --FSIDLFDKLANSSWKSNKKIKQYENEMETVLHHLMNKIHFQSKPIIIDMNPDQKISSQ 342
Query: 459 LEESFIE 465
++ES IE
Sbjct: 343 IKESLIE 349
>gi|449551073|gb|EMD42037.1| hypothetical protein CERSUDRAFT_129370 [Ceriporiopsis subvermispora
B]
Length = 794
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 130/248 (52%), Gaps = 42/248 (16%)
Query: 162 LVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETG 221
S+ S E ++ + L ++KS+ LGF PTPIQ A IP A GKD++G A TG
Sbjct: 197 FASDVAPSEEHSSFLSMNLSRPIIKSLTTLGFNTPTPIQAATIPVALL-GKDVVGNAVTG 255
Query: 222 SGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDH 281
SGKT AF +P+++RL M ++G++A R L++ PTRELA+Q +
Sbjct: 256 SGKTAAFIIPMLERL---------MYRDRGKKA------AATRCLVLVPTRELAVQCFEV 300
Query: 282 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 341
++A ++R +VGG+S + QE L+ RP++V+ TPGRL + + +E L
Sbjct: 301 GTKLAAHTDIRSCLVVGGLSLKAQEASLRTRPDVVIATPGRLIDHLRNSPTFTLE--ALD 358
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 401
VLDEADRM+E+G EL II P + RQT++FS
Sbjct: 359 ILVLDEADRMLEDGFSDELTEIIKSCPTS------------------------RQTMLFS 394
Query: 402 ATIALSAD 409
AT+ + D
Sbjct: 395 ATMTDTVD 402
>gi|33150792|gb|AAP97274.1|AF145022_1 ATP-dependent RNA helicase [Homo sapiens]
Length = 454
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 115/210 (54%), Gaps = 21/210 (10%)
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 315
K PK L ++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+R+L RPE+
Sbjct: 8 KAYPKRPLLGRVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEI 67
Query: 316 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 375
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML N+
Sbjct: 68 VVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEML------ND 121
Query: 376 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 435
Q KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 122 SQYN-------------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMDKTAKLDLLM 166
Query: 436 ERAGMRANVAIVDLTNVSVLANKLEESFIE 465
++ GMR ++DLT L E+ I
Sbjct: 167 QKIGMRGKPKVIDLTRNEATVETLTETKIH 196
>gi|443922203|gb|ELU41680.1| ATP-dependent RNA helicase drs1 [Rhizoctonia solani AG-1 IA]
Length = 1126
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 145/286 (50%), Gaps = 57/286 (19%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
++A++ T F + N R PLL +++ GF PTPIQ A IP A GKD++G A TGSG
Sbjct: 180 TDAQVHTSFTSMNLSR--PLL-RALTSAGFNSPTPIQAATIPVAL-LGKDVVGGAVTGSG 235
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 283
KT AF +PI++RLL A H R L++ PTRELA+Q +
Sbjct: 236 KTAAFIIPILERLLYRSRDA------------------HTRVLVLVPTRELAVQCHAVAE 277
Query: 284 EVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 343
++ +VR IVGG+S + QE L+ RP+LVV TPGRL + + L L
Sbjct: 278 KLGTFTDVRCALIVGGLSLKAQEATLRTRPDLVVATPGRLIDHLRNSRS--FALDALDVL 335
Query: 344 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 403
VLDEADRM+ +G EL+ I+ Q+C T RQT++FSAT
Sbjct: 336 VLDEADRMLSDGFADELKEIV-----------------QSCPT-------GRQTMLFSAT 371
Query: 404 IALSAD--FRKKLKHGSLKL-----KQSVNGLNSIETLSERAGMRA 442
+ + R L+H ++L KQ+ GL E + RAG A
Sbjct: 372 MTDDVETLIRLSLRH-PVRLFVDPSKQTARGLVQ-EFVRVRAGKEA 415
>gi|302915827|ref|XP_003051724.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732663|gb|EEU46011.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 714
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 129/231 (55%), Gaps = 17/231 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L P L+ + ++G+KEPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++
Sbjct: 280 WRESNLPPRLLSVVDQVGYKEPTPIQRAAIPIAL-QARDLIGVAVTGSGKTAAFLLPLLV 338
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + LE+ + YA LI+ PTREL Q+ K+ A+ + R V
Sbjct: 339 YISDL-----PPLEDHNKNDGPYA-------LILAPTRELVQQIETEAKKFAEPLGFRCV 386
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 387 SIVGGHSLEEQAYALRNGAEIIVATPGRLVDCI---ERRLLVLGQCCYVIMDEADRMIDL 443
Query: 355 GHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G + I+D LP++N + +E Q + RQT++++AT+
Sbjct: 444 GFEESVNKILDALPVSNEKPDTDDAENAQLMKRYLGGNDRYRQTMMYTATM 494
>gi|421891297|ref|ZP_16322106.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
K60-1]
gi|378963340|emb|CCF98854.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
K60-1]
Length = 495
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 134/258 (51%), Gaps = 48/258 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
S FD + LHP +++++ G+ PTPIQ A IP G+D++GAA+TG+GKT F
Sbjct: 14 SVTFDTFG---LHPDILRALTESGYTRPTPIQAAAIPVVV-GGRDVMGAAQTGTGKTAGF 69
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAK 287
LPI+Q LL E + +P H +RALI+TPTRELA QV D++ + AK
Sbjct: 70 SLPIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYAK 116
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+R + GG+ Q L+ E++V TPGRL + + ++ V L + VLDE
Sbjct: 117 YTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLDE 173
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 174 ADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSPE 209
Query: 408 ADFRKKLKHGSLKLKQSV 425
KKL L+ Q++
Sbjct: 210 I---KKLAASYLRHPQTI 224
>gi|340375196|ref|XP_003386122.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Amphimedon
queenslandica]
Length = 804
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 137/232 (59%), Gaps = 17/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+E L + I LG+KEPT IQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 375 WSEGGLPEKITDVIRGLGYKEPTAIQRQAIPIGL-QNRDIIGIAETGSGKTAAFVIPLLV 433
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K++ E + YA +I+ PTRELA Q+ + + AK ++VR V
Sbjct: 434 WVTS----LPKIVREADVDQGPYA-------IILAPTRELAQQIEEETMKFAKPLDVRTV 482
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 483 SLVGGLSREEQGFQLRLGCEIVIATPGRLIDVLEN--RYLV-LSQCTYIVLDEADRMIDM 539
Query: 355 GHFRELQSIIDMLPMTN--GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E+Q I+ LP++N ++ + T+ V ++S + RQT++F+AT+
Sbjct: 540 GFEPEVQKILAHLPVSNMKPDSDDAEDPTKMLVGINSSHHRYRQTVMFTATM 591
>gi|373859820|ref|ZP_09602543.1| DEAD/DEAH box helicase domain protein [Bacillus sp. 1NLA3E]
gi|372450463|gb|EHP23951.1| DEAD/DEAH box helicase domain protein [Bacillus sp. 1NLA3E]
Length = 487
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 130/232 (56%), Gaps = 48/232 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L P +MKSI ++GF+E TPIQ IP + + KD+IG A+TG+GKT AFG+P+++
Sbjct: 4 FQDLGLSPAMMKSIKKMGFEEATPIQAETIPLSL-ENKDLIGQAQTGTGKTAAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ ++ + +++ +++ PTRELA+QV++ L ++ G VRV+
Sbjct: 63 KVDKDAD--------------------YIQGIVVAPTRELAIQVSEELYKIGYGKRVRVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK P ++VGTPGRL + ++ L +HT +LDEAD M+
Sbjct: 103 PIYGGQDINRQIRALKKNPHIIVGTPGRLIDHINRKNLRLDRVHTA---ILDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 406
G ++++I+ +P +RQTL+FSAT+ +
Sbjct: 160 GFIEDIEAILSQIP------------------------AERQTLLFSATMPM 187
>gi|83746502|ref|ZP_00943553.1| ATP-dependent RNA helicase [Ralstonia solanacearum UW551]
gi|83726833|gb|EAP73960.1| ATP-dependent RNA helicase [Ralstonia solanacearum UW551]
Length = 566
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 134/258 (51%), Gaps = 48/258 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
S FD + LHP +++++ G+ PTPIQ A IP G+D++GAA+TG+GKT F
Sbjct: 85 SVTFDTFG---LHPDILRALTESGYTRPTPIQAAAIPVVV-GGRDVMGAAQTGTGKTAGF 140
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAK 287
LPI+Q LL E + +P H +RALI+TPTRELA QV D++ + AK
Sbjct: 141 SLPIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYAK 187
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+R + GG+ Q L+ E++V TPGRL + + ++ V L + VLDE
Sbjct: 188 YTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLDE 244
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 245 ADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSPE 280
Query: 408 ADFRKKLKHGSLKLKQSV 425
KKL L+ Q++
Sbjct: 281 I---KKLAASYLRHPQTI 295
>gi|327295054|ref|XP_003232222.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
gi|326465394|gb|EGD90847.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
Length = 813
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 143/307 (46%), Gaps = 72/307 (23%)
Query: 105 PGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVS 164
P D DEDG+G + E + ++ Q + EE VT EL S
Sbjct: 252 PDDLASDEDGSGSESEDDDEIRKQN-----------EFFAPEEQVT----------ELKS 290
Query: 165 EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGK 224
+ F L L +++ + +GF PTPIQ+ IP A GKD++G A TGSGK
Sbjct: 291 TSRAPASF---QNLSLSRPILRGLASVGFSTPTPIQRKTIPVALL-GKDVVGGAVTGSGK 346
Query: 225 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHL 282
T AF +PI++RLL Y P+ R I+ PTRELA+Q +
Sbjct: 347 TGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNVA 387
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 342
++A ++ +VGG S +QE +LK RP++++ TPGR + M V+ TL
Sbjct: 388 TKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEI 445
Query: 343 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 402
VLDEADRM+E+G EL I+ +P K RQT++FSA
Sbjct: 446 LVLDEADRMLEDGFAEELNEILTTIP------------------------KSRQTMLFSA 481
Query: 403 TIALSAD 409
T+ S D
Sbjct: 482 TMTSSVD 488
>gi|15219185|ref|NP_173078.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
gi|75336890|sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36
gi|4966350|gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila
melanogaster and is a member of PF|00270 DEAD/DEAH box
helicase family [Arabidopsis thaliana]
gi|332191310|gb|AEE29431.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
Length = 491
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 130/249 (52%), Gaps = 49/249 (19%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEK 250
LG ++PTP+Q C+P G+D++G A+TGSGKT AF LPI+ RL E+
Sbjct: 76 LGMRKPTPVQTHCVPKIL-AGRDVLGLAQTGSGKTAAFALPILHRLAED----------- 123
Query: 251 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLK 310
P G + AL++TPTRELA Q+ + K + +N+R IVGGM Q L
Sbjct: 124 --------PYG-VFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLV 174
Query: 311 ARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 370
+RP +V+ TPGR+ L+ F VLDEADR+++ G EL++I LP
Sbjct: 175 SRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLP-- 232
Query: 371 NGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK--LKQSVNGL 428
K RQTL+FSAT ++++ + L+H S K ++ GL
Sbjct: 233 ----------------------KSRQTLLFSAT--MTSNLQALLEHSSNKAYFYEAYEGL 268
Query: 429 NSIETLSER 437
+++TL+++
Sbjct: 269 KTVDTLTQQ 277
>gi|205372271|ref|ZP_03225085.1| hypothetical protein Bcoam_02010 [Bacillus coahuilensis m4-4]
Length = 499
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 130/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL L P ++KSI R+GF+E TPIQ IP + +GKDIIG A+TG+GKT AFG+P+++
Sbjct: 4 FSELNLSPSMLKSINRMGFEEATPIQAGTIPLSL-EGKDIIGQAQTGTGKTAAFGIPLVE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + +++ LII PTRELA+QV++ L +V VRV+
Sbjct: 63 KIDTK--------------------NTNVQGLIIAPTRELAIQVSEELYKVGYDKRVRVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R +K P ++VGTPGRL + ++ L ++HTL VLDEAD M+
Sbjct: 103 AVYGGQDINRQIRAMKKGPHIIVGTPGRLLDHINRRTLKLDQVHTL---VLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++SI+ +P EG RQTL+FSAT+
Sbjct: 160 GFIDDIESILKNVP------EG------------------RQTLLFSATM 185
>gi|225443496|ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 709
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 134/241 (55%), Gaps = 27/241 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
++I +W E +L P L+K++ R G+K P+PIQ A IP Q +D+IG AETGSGKT
Sbjct: 282 SKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQ-RDVIGIAETGSGKT 340
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 341 AAFVLPMLTYI--------SRLPPISEENEAEGPY----AVVMAPTRELAQQIEDETVKF 388
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 389 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVL 445
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSAT 403
DEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSAT
Sbjct: 446 DEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSAT 496
Query: 404 I 404
+
Sbjct: 497 M 497
>gi|170029482|ref|XP_001842621.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Culex
quinquefasciatus]
gi|167863205|gb|EDS26588.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Culex
quinquefasciatus]
Length = 815
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 145/240 (60%), Gaps = 16/240 (6%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
+I +W E +++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKT
Sbjct: 380 GKIPNPIRSWKESGFPKEVLEIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGIAETGSGKT 438
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
LAF +P++ + G E+ E A++ P A+I+ PTRELA Q+ + ++
Sbjct: 439 LAFLIPLLNWI------QGLPKIERQETADQ-GPY----AIILAPTRELAQQIEEETQKF 487
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ V+
Sbjct: 488 GQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVM 544
Query: 346 DEADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 545 DEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDATKLMENFNTKKKYRQTVMFTATM 604
>gi|194880138|ref|XP_001974373.1| GG21122 [Drosophila erecta]
gi|190657560|gb|EDV54773.1| GG21122 [Drosophila erecta]
Length = 816
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 146/238 (61%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W+E ++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 383 IPNPIRSWSESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 441
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 442 FLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFGQ 490
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 491 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 547
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F+AT+
Sbjct: 548 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATM 605
>gi|357601923|gb|EHJ63191.1| hypothetical protein KGM_14588 [Danaus plexippus]
Length = 829
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 143/238 (60%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W E H +M+ I ++G+K PTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 396 IPNPIRSWKEANFHEDIMEIISKVGYKSPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 454
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ ++ K +M E+A++ P A+I+ PTRELA Q+ + +
Sbjct: 455 FLIPLLT-WIQSLPKNERM-----EDADQ-GPY----AIILAPTRELAQQIEEETNKFGI 503
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ + V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 504 PLGITSVVVVGGLSREEQGFKLRLGCEIVIATPGRLIDVLEN--RYLV-LNRCTYVVLDE 560
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N + + + + + + +KK RQT++F+AT+
Sbjct: 561 ADRMIDMGFEPDVQKILEYMPVSNIKPDTDAAEDASVLLANYNSKKKFRQTVMFTATM 618
>gi|449667317|ref|XP_002168355.2| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Hydra
magnipapillata]
Length = 429
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L LH L K +G +PT IQ +CIP G+D IG+A+TGSGKT AF LPI+Q
Sbjct: 5 FTDLGLHEWLNKQCLEMGISKPTEIQVSCIPEIL-SGRDCIGSAKTGSGKTAAFALPIIQ 63
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L E+ P G + ALI+TPTRELA+Q+ D K + K I +
Sbjct: 64 KLSED-------------------PYG-IFALILTPTRELAIQIADQFKALGKSIGLNDA 103
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I+GG+ KQ L +P +V+ TPGRL ++ G K L+ + F VLDEADR++E
Sbjct: 104 VIIGGLDMVKQGMELSNQPHVVIATPGRLASHITSGTKF--SLNKIKFLVLDEADRLLEK 161
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
+L+ I D + KKRQTL+FSATI + + K++
Sbjct: 162 SFENDLEVIFDNIA------------------------KKRQTLLFSATITDAINHLKEV 197
Query: 415 KH 416
H
Sbjct: 198 AH 199
>gi|443729582|gb|ELU15447.1| hypothetical protein CAPTEDRAFT_224580 [Capitella teleta]
Length = 648
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 138/231 (59%), Gaps = 16/231 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E ++ L+ I ++G+ EPTPIQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 221 WRESKICTELLDIIEKIGYTEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFLIPLLT 279
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ G E+ E+A+ Y P ALI+ PTRELA Q+ + + ++ V
Sbjct: 280 WI------QGLPKIERMEDAD-YGP----YALILAPTRELAQQIEEETIRFGGPLGMKTV 328
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG+S E+Q L+ E+V+ TPGRL +++ K+LV LH ++ VLDEAD+MI
Sbjct: 329 AVIGGLSREEQGFKLRQGCEVVIATPGRLIDVLEN--KYLV-LHRCTYVVLDEADKMINM 385
Query: 355 GHFRELQSIIDMLPMTNGSNEG-QSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E+Q+I+ LP+TN + ++E + ++ + K RQT++F+AT+
Sbjct: 386 GFEPEVQNILKFLPVTNEKPDSEEAEDAEFLLSNFMSKNKFRQTVMFTATM 436
>gi|162447374|ref|YP_001620506.1| ATP-dependent RNA helicase, DEAD box containing [Acholeplasma
laidlawii PG-8A]
gi|161985481|gb|ABX81130.1| ATP-dependent RNA helicase, superfamily II [Acholeplasma laidlawii
PG-8A]
Length = 448
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 135/230 (58%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL + + K++ G++ PT IQ+ IP G+D++G+A+TG+GKT AF +PI+Q
Sbjct: 3 FSELNIIERIQKALTLSGYEAPTAIQEQAIPILL-SGQDLLGSAQTGTGKTAAFAIPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ E +E AP+ ++ALI+TPTRELALQ+ +++K AK +N+
Sbjct: 62 KIYETKEHK--------------APR-KVQALILTPTRELALQIHENVKIYAKYLNIIST 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S ++QE LK ++V+ TPGRL +LM+ + ++ L + + VLDEAD+M++
Sbjct: 107 TIYGGVSQKRQEEALKRGVDVVIATPGRLLDLMN---QKIISLQDVRYLVLDEADQMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ SI+D P KKRQT++FSAT+
Sbjct: 164 GFIKDVTSIVDKTP------------------------KKRQTMLFSATM 189
>gi|196001667|ref|XP_002110701.1| hypothetical protein TRIADDRAFT_50105 [Trichoplax adhaerens]
gi|190586652|gb|EDV26705.1| hypothetical protein TRIADDRAFT_50105 [Trichoplax adhaerens]
Length = 722
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 135/238 (56%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I AW+E L L+ I L + EPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 288 IPNPLRAWSESELSKELLDIISDLKYNEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 346
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K++ E + YA +I+ PTRELA Q+ + K
Sbjct: 347 FLIPLLVWIT----SLPKIVREADIDQGPYA-------IIMAPTRELAQQIEEEAARFGK 395
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG++ E+Q LL+ E+V+ TPGRL +++ +LV L+ ++ VLDE
Sbjct: 396 PVGIRTVAVIGGLNREEQGFLLRQGCEIVIATPGRLLDVLDNS--YLV-LNQCTYVVLDE 452
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS-SLQRKKRQTLVFSATI 404
ADRMI+ G ++QSI++ LP++N + Q + + + + RQT++F+AT+
Sbjct: 453 ADRMIDMGFEPDVQSILEYLPVSNQKPDTDDAQDPNKIRLKLGDKNRYRQTVMFTATM 510
>gi|374290252|ref|YP_005037305.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Blattabacterium
sp. (Cryptocercus punctulatus) str. Cpu]
gi|358377044|gb|AEU09232.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Blattabacterium
sp. (Cryptocercus punctulatus) str. Cpu]
Length = 550
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 124/224 (55%), Gaps = 50/224 (22%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL-LEEREK 242
++K+I +GFK PTPIQK IP KDII A+TG+GKT AFGLPI+Q++ LE R
Sbjct: 14 IIKAIENIGFKYPTPIQKKVIPFLLESEKDIIALAQTGTGKTAAFGLPIIQKINLEIR-- 71
Query: 243 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMS 301
YA +ALI+ PTREL LQ+T L +K I ++++P+ GG+S
Sbjct: 72 --------------YA-----QALILCPTRELCLQITRDLLSFSKYILLIKIIPLYGGVS 112
Query: 302 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 361
+ Q +LLK ++VGTPGR+ +L+ + + L + + +LDEAD M+ G EL
Sbjct: 113 IDNQIQLLKKSNHIIVGTPGRIIDLIRRNKLY---LSNIKYLILDEADEMLNMGFKEELD 169
Query: 362 SIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
SII LP KKRQ+L+FSAT++
Sbjct: 170 SIILKLP------------------------KKRQSLLFSATMS 189
>gi|195484183|ref|XP_002090584.1| GE13195 [Drosophila yakuba]
gi|194176685|gb|EDW90296.1| GE13195 [Drosophila yakuba]
Length = 821
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 146/238 (61%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W+E ++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 388 IPNPIRSWSESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 446
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 447 FLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFGQ 495
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 496 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 552
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN + + + +T + + +KK RQT++F+AT+
Sbjct: 553 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATM 610
>gi|358056510|dbj|GAA97479.1| hypothetical protein E5Q_04157 [Mixia osmundae IAM 14324]
Length = 476
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 120/231 (51%), Gaps = 46/231 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L L P L +++ + ++PT +Q ACIP QG+D IG+A+TGSGKT+AF PI+
Sbjct: 2 SFDSLGLEPFLCRALDSMSIRKPTEVQAACIPPIL-QGRDCIGSAQTGSGKTIAFATPIL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q L E+ P G + AL++TPTRELA Q+ D + IN++
Sbjct: 61 QALAED-------------------PYG-IFALVLTPTRELAFQIADQFVALGTPINLQS 100
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+VGG+ Q L++RP +V+ TPGRL +LM + L F VLDEADRM+
Sbjct: 101 TVVVGGLDMMAQATALRSRPHVVIATPGRLVDLMRSNQNEF-SFARLRFLVLDEADRMLN 159
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
EL I+ LP K+RQTL+F+AT+
Sbjct: 160 PTFADELGYILAALP------------------------KERQTLLFTATV 186
>gi|170040294|ref|XP_001847939.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167863866|gb|EDS27249.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 818
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 145/240 (60%), Gaps = 16/240 (6%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
+I +W E +++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKT
Sbjct: 383 GKIPNPIRSWKESGFPKEVLEIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGIAETGSGKT 441
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
LAF +P++ + G E+ E A++ P A+I+ PTRELA Q+ + ++
Sbjct: 442 LAFLIPLLNWI------QGLPKIERQETADQ-GPY----AIILAPTRELAQQIEEETQKF 490
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ V+
Sbjct: 491 GQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVM 547
Query: 346 DEADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 548 DEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDATKLMENFNTKKKYRQTVMFTATM 607
>gi|70725957|ref|YP_252871.1| hypothetical protein SH0956 [Staphylococcus haemolyticus JCSC1435]
gi|123660708|sp|Q4L7W0.1|Y956_STAHJ RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SH0956
gi|68446681|dbj|BAE04265.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 503
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 131/225 (58%), Gaps = 35/225 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP +GKDI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVETLEAMGFKEPTPIQKDSIPYTL-EGKDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK + ++ALI+ PTRELA+QV + L+E ++G NV+VV
Sbjct: 62 --------------------EKVVGQSGVQALILAPTRELAMQVAEQLREFSRGQNVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM ++Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 399
G +++ I+D +P +EQ QT + S+ K QTLV
Sbjct: 159 GFIDDMRFIMDKIP---------AEQRQTML-FSATMPKAIQTLV 193
>gi|302695203|ref|XP_003037280.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
gi|300110977|gb|EFJ02378.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
Length = 771
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 133/261 (50%), Gaps = 53/261 (20%)
Query: 160 EE-----------LVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAA 208
EE SE+ E ++ + L ++K++ LGF +PTPIQ A IP A
Sbjct: 155 EETQAEKDRKAAYFDSESGAPAEHSSFLTMNLSRPILKALTTLGFTKPTPIQAATIPVAL 214
Query: 209 HQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALII 268
GKD++G A TGSGKT AF +P+++RLL EKG++A R L++
Sbjct: 215 -LGKDVVGNAVTGSGKTAAFTIPMLERLL---------YREKGKKA------AATRCLVL 258
Query: 269 TPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 328
PTRELA+Q + K++A ++ V IVGG+S + QE L+ARP++V+ TPGRL + +
Sbjct: 259 VPTRELAVQCYEVGKKLAAHTDIEVALIVGGLSLKSQEATLRARPDIVIATPGRLIDHIH 318
Query: 329 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS 388
L L VLDEADRM+ +G EL II P
Sbjct: 319 NSPSF--TLDNLDVLVLDEADRMLSDGFADELTEIIKACP-------------------- 356
Query: 389 SLQRKKRQTLVFSATIALSAD 409
K RQT++FSAT+ S D
Sbjct: 357 ----KSRQTMLFSATMTDSVD 373
>gi|432850192|ref|XP_004066748.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX24-like [Oryzias latipes]
Length = 820
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 118/202 (58%), Gaps = 23/202 (11%)
Query: 263 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 322
L +++TPTRELA+QV H+ V K +++ +VGGM+ +KQ+R+LK PE+++ TPGR
Sbjct: 351 LLGMVLTPTRELAVQVKHHIDAVTKFTDIKTAILVGGMAQQKQKRMLKRCPEIIIATPGR 410
Query: 323 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 382
LW+L+ HL+ L L V+DEADRM+E GHF EL+S+++ML T+ +
Sbjct: 411 LWDLIKEKHPHLLNLRHLRCLVIDEADRMVERGHFAELESLLEMLNTTHFN--------- 461
Query: 383 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 442
KRQT VFSAT+ L+ +L L+ K+++ + ++ L E+ G+++
Sbjct: 462 ----------PKRQTFVFSATLTLTHSLPSRL----LQKKKNLEKRSKLDILIEKVGIKS 507
Query: 443 NVAIVDLTNVSVLANKLEESFI 464
++DLT L E+ I
Sbjct: 508 KPKVIDLTRKEATVETLTETQI 529
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 9/106 (8%)
Query: 133 KKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLG 192
+++ + G KT + G DD ++ VS AW +L + ++K++ LG
Sbjct: 161 RERSRHGGAAKTKNWTSAALCGSDDDKQSDVS---------AWKDLFVPSSVLKALSSLG 211
Query: 193 FKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLE 238
F+ PTPIQ +P A D++GAAETGSGKTLAFG+P++ +LE
Sbjct: 212 FESPTPIQALALPPAIRDHMDVLGAAETGSGKTLAFGIPMIHAILE 257
>gi|325568403|ref|ZP_08144770.1| cold-shock DEAD box protein A [Enterococcus casseliflavus ATCC
12755]
gi|420263005|ref|ZP_14765645.1| cold-shock DEAD box protein A [Enterococcus sp. C1]
gi|325158172|gb|EGC70325.1| cold-shock DEAD box protein A [Enterococcus casseliflavus ATCC
12755]
gi|394769969|gb|EJF49787.1| cold-shock DEAD box protein A [Enterococcus sp. C1]
Length = 508
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 133/260 (51%), Gaps = 55/260 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L L+ S+ R GF+E TPIQ+A IP A GKD+IG A+TG+GKT AFGLP++
Sbjct: 3 FKDLELSNELLTSVERAGFEEATPIQEATIPLAL-AGKDVIGQAQTGTGKTAAFGLPML- 60
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
EK P H L+ L+I PTRELA+Q + L + K +RV
Sbjct: 61 --------------------EKIDPANHQLQGLVIAPTRELAIQTQEELYRLGKDKKIRV 100
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVETLVLDEADEMLN 157
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 408
G +++ II +P RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVPDV------------------------RQTLLFSATMPPAIKNIGV 193
Query: 409 DFRKKLKHGSLKLKQSVNGL 428
F K+ +H +K K+ L
Sbjct: 194 KFMKEPEHVQIKAKEMTADL 213
>gi|108761880|ref|YP_632259.1| ATP-dependent RNA helicase RhlE [Myxococcus xanthus DK 1622]
gi|108465760|gb|ABF90945.1| putative ATP-dependent RNA helicase RhlE [Myxococcus xanthus DK
1622]
Length = 501
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 123/230 (53%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+++L+LH L++++ G+ PTPIQ+ IP A G+D++G A+TG+GKT AF LPI+Q
Sbjct: 3 FDDLQLHDTLLRAVKAEGYTTPTPIQQKAIPHAL-AGRDVLGVAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL + G +R L++TPTRELA QV D KG+ +R
Sbjct: 62 RLSAKAPAGGAR---------------PVRCLVLTPTRELAGQVGDSFGTYGKGLPLRHA 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ Q + L+ +++V TPGRL +LM E+ V L +L FVLDEADRM++
Sbjct: 107 VIFGGVGQNPQVQTLRNGVDVLVATPGRLLDLM---EQGFVSLRSLEVFVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ +I LP KRQTL FSAT+
Sbjct: 164 GFIHDVRRVIKALP------------------------PKRQTLFFSATL 189
>gi|168025828|ref|XP_001765435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683285|gb|EDQ69696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 535
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 130/230 (56%), Gaps = 23/230 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L P L+K++ ++G+ +P+PIQ A IP Q +D+IG AETGSGKT AF LP++
Sbjct: 116 WAEGALSPELLKAVQKVGYTKPSPIQMAAIPIGLQQ-RDVIGIAETGSGKTAAFVLPMLT 174
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + L EE E P A+++ PTRELA Q+ D + A +++RVV
Sbjct: 175 YISK--------LPPMTEEIEAEGPY----AVVMAPTRELAQQIEDETVKFAHFLDIRVV 222
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG S E+Q L+ E+V+ TPGRL + + E+ L+ ++ VLDEADRMI+
Sbjct: 223 SIVGGQSIEEQGFKLRQGCEVVIATPGRLLDCL---ERRYAVLNQCNYVVLDEADRMIDM 279
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++ ++D +P +N E + + T + R T +FSAT+
Sbjct: 280 GFEPQVMGVLDAMPSSNLKPENEDAELDT-------HKIYRTTYMFSATM 322
>gi|403415272|emb|CCM01972.1| predicted protein [Fibroporia radiculosa]
Length = 782
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 126/239 (52%), Gaps = 42/239 (17%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E ++ + L ++KSI LGF +PTPIQ A IP A GKDI+G A TGSGKT AF +
Sbjct: 191 EHTSFLSMNLSRPIIKSITALGFNKPTPIQAATIPVAL-LGKDIVGNAVTGSGKTAAFII 249
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
P+++RLL ++G++A R L++ PTREL +Q + ++A +
Sbjct: 250 PMLERLL---------YRDRGKKA------AATRCLVLVPTRELGVQCFEVGTKLAAHTD 294
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+R +VGG+S + QE L+ RP++V+ TPGRL + + L L VLDEADR
Sbjct: 295 IRFSLVVGGLSVKTQEATLRTRPDVVIATPGRLIDHLRNSPAFT--LDALDILVLDEADR 352
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
M+ +G EL II PM+ RQT++FSAT+ S D
Sbjct: 353 MLSDGFADELTEIIKSCPMS------------------------RQTMLFSATMTDSVD 387
>gi|384550878|ref|YP_005740130.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus JKD6159]
gi|302333727|gb|ADL23920.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus JKD6159]
Length = 506
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|258422918|ref|ZP_05685818.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus A9635]
gi|417891554|ref|ZP_12535616.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21200]
gi|418283345|ref|ZP_12896092.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21202]
gi|418307556|ref|ZP_12919253.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21194]
gi|418560738|ref|ZP_13125247.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21252]
gi|418889888|ref|ZP_13444016.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1524]
gi|418994781|ref|ZP_13542414.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG290]
gi|257846942|gb|EEV70956.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus A9635]
gi|341851971|gb|EGS92873.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21200]
gi|365167681|gb|EHM59059.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21202]
gi|365245536|gb|EHM86169.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21194]
gi|371971160|gb|EHO88567.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21252]
gi|377741714|gb|EHT65700.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG290]
gi|377751205|gb|EHT75138.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1524]
Length = 506
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIPAA-----------------------QRQTMLFSATM 185
>gi|358467620|ref|ZP_09177312.1| hypothetical protein HMPREF9093_01792 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357067539|gb|EHI77649.1| hypothetical protein HMPREF9093_01792 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 529
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 120/197 (60%), Gaps = 26/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK E E H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------EKFETTEH-----HIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 109
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +FVLDEAD M+
Sbjct: 110 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFVLDEADEMLNM 166
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 167 GFVEDIEKI---LTFTN 180
>gi|372270527|ref|ZP_09506575.1| ATP-dependent DEAD/DEAH box helicase [Marinobacterium stanieri S30]
Length = 460
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 128/234 (54%), Gaps = 45/234 (19%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+F+ + EL LH L+K+I +LGF +PTP+Q +P A G D+I AETGSGKTLAF
Sbjct: 5 DFNVFAELMLHERLLKAIDKLGFTQPTPVQLETLPEAL-AGHDLIVGAETGSGKTLAFVA 63
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
P++Q L+ +P R LI+TPTRELA QV +K++A
Sbjct: 64 PMLQHFLD-----------------TPSPNTGTRGLILTPTRELAEQVCQSVKDLAAFTR 106
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
V V+ + GG ++Q ++ PE++V TPGRL E + E+ ++L L + VLDEADR
Sbjct: 107 VNVMTVCGGTGFKEQAAEMRKNPEVLVATPGRLAEHL---ERQTLDLDDLEYLVLDEADR 163
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
M++ G E+ +I+D+ C R +RQ++VFSAT+
Sbjct: 164 MLDMGFRDEVMAIVDI-----------------C-------RPQRQSMVFSATL 193
>gi|310659566|ref|YP_003937287.1| ATP-dependent RNA helicase; cold shock [[Clostridium] sticklandii]
gi|308826344|emb|CBH22382.1| ATP-dependent RNA helicase; cold shock [[Clostridium] sticklandii]
Length = 515
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 142/268 (52%), Gaps = 58/268 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NEL L L+K++ +GF PTPIQ+ IP A QG D+IG A+TG+GKT AFG+P++
Sbjct: 4 FNELGLQEELLKAVLDMGFDSPTPIQEQIIPLAM-QGIDLIGQAQTGTGKTAAFGIPLLS 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ EKG +A ++ALI+ PTRELALQV+ + +AK NV +
Sbjct: 63 KI------------EKGNKA--------VQALILAPTRELALQVSQEINRLAKYKNVEAI 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG KQ R LK P++VV TPGR + M ++ + L + +LDEAD M+
Sbjct: 103 AIYGGEDIGKQIRGLKKNPQIVVATPGRFMDHM---RRNTINLANIQTVILDEADEMLSM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G ++++I+ +P +RQTL+FSAT+ ++S
Sbjct: 160 GFIEDIETILQEVP------------------------SERQTLLFSATMPKRIQSVSQK 195
Query: 410 FRKKLKHGSLKLKQSVNGLNSIETLSER 437
F K + ++K N +++T+ +R
Sbjct: 196 FMKSPQTVAVK-----NKTMTVDTIEQR 218
>gi|262066543|ref|ZP_06026155.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium
periodonticum ATCC 33693]
gi|291379777|gb|EFE87295.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium
periodonticum ATCC 33693]
Length = 528
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKILKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFEHSDHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +FVLDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFVLDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFVEDIEKI---LTFTN 179
>gi|242022378|ref|XP_002431617.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative
[Pediculus humanus corporis]
gi|212516925|gb|EEB18879.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative
[Pediculus humanus corporis]
Length = 788
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 142/231 (61%), Gaps = 16/231 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E ++ ++ I R+G+ E TPIQ+ IP Q +DIIG AETGSGKTLAF +P++
Sbjct: 362 WKEAKIPQEILDIIERVGYTEATPIQRQAIPIGL-QNRDIIGVAETGSGKTLAFLIPLIM 420
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ K +M E+A++ P A+I+ PTRELA Q+ + + + +R V
Sbjct: 421 -WIQSLPKIQRM-----EDADQ-GPY----AIILAPTRELAQQIEEETNKFGNPLGIRTV 469
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 470 VVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMIDM 526
Query: 355 GHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN + ++E + + + ++K RQT++F+AT+
Sbjct: 527 GFEPDVQKILEYMPVTNLKPDTEEAEDDKFLLANYNSKKKYRQTVMFTATM 577
>gi|283771250|ref|ZP_06344139.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus H19]
gi|283459455|gb|EFC06548.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus H19]
Length = 506
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|402221947|gb|EJU02015.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 809
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 126/245 (51%), Gaps = 42/245 (17%)
Query: 165 EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGK 224
+A ST + + L L+K++ LGF++PTPIQ A IP A GKD++G A TGSGK
Sbjct: 211 DAATSTSDVTFQSMNLSRPLLKALANLGFEKPTPIQAAAIPVALL-GKDVVGGAVTGSGK 269
Query: 225 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 284
T AF +PI++RLL ++G+ A R +I+ PTRELA+Q
Sbjct: 270 TAAFVIPILERLL---------FRDRGKAA------ATTRVVILCPTRELAVQCHAVATR 314
Query: 285 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
+ +VR +VGG+S + QE L+ RP++V+ TPGRL + + L L +
Sbjct: 315 IGSFTDVRFSLVVGGLSLKGQEAELRTRPDVVIATPGRLIDHLRNSPSF--SLDMLDVLI 372
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+DEADRM+E G EL II P K+RQT++FSAT+
Sbjct: 373 MDEADRMLEEGFAAELGEIISACP------------------------KQRQTMLFSATM 408
Query: 405 ALSAD 409
S D
Sbjct: 409 TDSVD 413
>gi|260823718|ref|XP_002606227.1| hypothetical protein BRAFLDRAFT_287109 [Branchiostoma floridae]
gi|229291567|gb|EEN62237.1| hypothetical protein BRAFLDRAFT_287109 [Branchiostoma floridae]
Length = 564
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 136/238 (57%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I W E L + I LG+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 199 IPNPLRTWKEASLTDEIDSIIKDLGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 257
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + E K++ + + YA +I+ PTRELA Q+ + + +
Sbjct: 258 FLIPLLIWI----ESLPKIVRNEDADQGPYA-------IILAPTRELAQQIEEETLKFGR 306
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ V+DE
Sbjct: 307 RLGIRTVAVIGGLSREDQGFKLRMGCEIVIATPGRLIDVLEN--RYLV-LSQCTYVVMDE 363
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGS-NEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ LP+TN + ++E + S + K RQT++F+AT+
Sbjct: 364 ADRMIDMGFEPDVQKILEYLPVTNQKPDTEEAEDVEKLKANFSTKNKYRQTVMFTATM 421
>gi|328956797|ref|YP_004374183.1| ATP-dependent RNA helicase RhlE [Carnobacterium sp. 17-4]
gi|328673121|gb|AEB29167.1| ATP-dependent RNA helicase RhlE [Carnobacterium sp. 17-4]
Length = 423
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 127/230 (55%), Gaps = 44/230 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NEL L+ L+ ++ G+ + TPIQ+ IP + KD++G A+TG+GKT AF LPI+Q
Sbjct: 3 FNELELNQHLLHALKEAGYTKATPIQEDAIPHLMN-NKDLLGCAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++EE K KG ++ALI+ PTRELA+Q+ D + AK + + +
Sbjct: 62 NIMEE----------------KTIGKGAIKALILAPTRELAIQIGDSFQTYAKYLPLNIQ 105
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S Q LK +++V TPGRL +L+ G V+L+ + FFVLDEAD M++
Sbjct: 106 VIFGGVSQNPQTATLKRGTDILVATPGRLLDLIRQG---FVKLNQVDFFVLDEADMMLDM 162
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G R+++ II LP KKRQ++ FSAT+
Sbjct: 163 GMLRDVRHIIRELP------------------------KKRQSMFFSATM 188
>gi|373455480|ref|ZP_09547312.1| hypothetical protein HMPREF9453_01481 [Dialister succinatiphilus
YIT 11850]
gi|371934839|gb|EHO62616.1| hypothetical protein HMPREF9453_01481 [Dialister succinatiphilus
YIT 11850]
Length = 504
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 130/233 (55%), Gaps = 48/233 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
+D + EL + P ++K++ +GF+EP+PIQKA IP A GKD+IG A+TG+GKT AFG+P
Sbjct: 2 YDTFKELGIAPEILKAVEDMGFEEPSPIQKAAIPIAL-TGKDLIGQAQTGTGKTAAFGIP 60
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
I++R+ + K P+ A++++PTRELA+Q + + +A+ + +
Sbjct: 61 ILERI----------------DTSKPGPQ----AVVLSPTRELAIQSAEEINHLAQYLPI 100
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+PI GG E+Q + L+ P ++V TPGRL + M G ++L + VLDE D M
Sbjct: 101 HALPIYGGQDIERQFKALRKHPNIIVATPGRLMDHMKRGT---IDLSHVQVLVLDEGDEM 157
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++ G ++++I+ +P ++RQT+ FSAT+
Sbjct: 158 VDMGFIDDIRTILAGIP------------------------EERQTMFFSATM 186
>gi|257867061|ref|ZP_05646714.1| helicase [Enterococcus casseliflavus EC30]
gi|257873396|ref|ZP_05653049.1| helicase [Enterococcus casseliflavus EC10]
gi|257877139|ref|ZP_05656792.1| helicase [Enterococcus casseliflavus EC20]
gi|257801117|gb|EEV30047.1| helicase [Enterococcus casseliflavus EC30]
gi|257807560|gb|EEV36382.1| helicase [Enterococcus casseliflavus EC10]
gi|257811305|gb|EEV40125.1| helicase [Enterococcus casseliflavus EC20]
Length = 507
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 133/260 (51%), Gaps = 55/260 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L L+ S+ R GF+E TPIQ+A IP A GKD+IG A+TG+GKT AFGLP++
Sbjct: 3 FKDLELSNELLTSVERAGFEEATPIQEATIPLAL-AGKDVIGQAQTGTGKTAAFGLPML- 60
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
EK P H L+ L+I PTRELA+Q + L + K +RV
Sbjct: 61 --------------------EKIDPTNHQLQGLVIAPTRELAIQTQEELYRLGKDKKIRV 100
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVETLVLDEADEMLN 157
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 408
G +++ II +P RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVPDV------------------------RQTLLFSATMPPAIKNIGV 193
Query: 409 DFRKKLKHGSLKLKQSVNGL 428
F K+ +H +K K+ L
Sbjct: 194 KFMKEPEHVQIKAKEMTADL 213
>gi|379796406|ref|YP_005326407.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356873399|emb|CCE59738.1| Probable DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus
subsp. aureus MSHR1132]
Length = 506
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIPAA-----------------------QRQTMLFSATM 185
>gi|392970003|ref|ZP_10335412.1| probable DEAD-box ATP-dependent RNA helicase [Staphylococcus
equorum subsp. equorum Mu2]
gi|403046049|ref|ZP_10901524.1| ATP-dependent RNA helicase [Staphylococcus sp. OJ82]
gi|392511931|emb|CCI58617.1| probable DEAD-box ATP-dependent RNA helicase [Staphylococcus
equorum subsp. equorum Mu2]
gi|402764211|gb|EJX18298.1| ATP-dependent RNA helicase [Staphylococcus sp. OJ82]
Length = 507
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 131/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L + +++ +GF + TPIQK IP A +GKD++G A+TG+GKT AFG+P++
Sbjct: 4 FKELGLSDKMAETLASMGFDDATPIQKESIPLAL-EGKDVLGQAQTGTGKTGAFGIPLV- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK A K +++LI+ PTRELA+QV + ++E AKG NV+VV
Sbjct: 62 --------------------EKVADKEGVQSLILAPTRELAMQVAESIREFAKGQNVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM ++Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIDRQIKSLKKGPQIVVGTPGRVIDHLNRRTLKTNDVHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P + +RQT++FSAT+
Sbjct: 159 GFIDDMKFIMDKIPAS-----------------------QRQTMLFSATM 185
>gi|415909527|ref|ZP_11553150.1| ATP-dependent RNA helicase [Herbaspirillum frisingense GSF30]
gi|407762572|gb|EKF71396.1| ATP-dependent RNA helicase [Herbaspirillum frisingense GSF30]
Length = 493
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 129/243 (53%), Gaps = 47/243 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + L P ++K++ G+ PTPIQ IP QG+D++GAA+TG+GKT F LPI+Q
Sbjct: 18 FEDFGLSPDILKALAEQGYVHPTPIQAQAIPVVL-QGRDVMGAAQTGTGKTAGFSLPIIQ 76
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
RLL+ + +P H +RALI+TPTRELA QV D++ + +R
Sbjct: 77 RLLQHASHSA-------------SPARHPVRALILTPTRELADQVADNVAAYCRFTPLRS 123
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG+ Q +L+A E+V+ TPGRL + + ++ V L V+DEADRM++
Sbjct: 124 TVVFGGVDMSPQTAILRAGVEIVIATPGRLLDHV---QQKTVNLSQTQILVMDEADRMLD 180
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 408
G +LQ II++LP K+RQ L+FSAT + L+A
Sbjct: 181 MGFLPDLQRIINLLP------------------------KQRQNLLFSATFSPEIKKLAA 216
Query: 409 DFR 411
F+
Sbjct: 217 SFQ 219
>gi|332374708|gb|AEE62495.1| unknown [Dendroctonus ponderosae]
Length = 470
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 121/223 (54%), Gaps = 23/223 (10%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
++ E +++L+L ++K + +G K PTPIQ CIP +GK IGAA+TGSGKTLA
Sbjct: 1 MAEELSNFSQLKLQNWIVKQCHSIGVKRPTPIQANCIPKIL-EGKTCIGAAKTGSGKTLA 59
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F LPI+Q+L E+ P G + AL++TP RELA Q+ D + K
Sbjct: 60 FALPIVQKLYED-------------------PYG-IYALVLTPIRELAFQIADQFAILGK 99
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+N+R +VGGM +Q R L P +VV TPGRL + + G + L + F V+DE
Sbjct: 100 PMNMRTCVVVGGMDMVEQGRQLSKVPHVVVATPGRLVDHLEGCDTF--TLSRIKFLVIDE 157
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 390
ADR++ +++ I +LP T S + T T T+ L
Sbjct: 158 ADRLLGGLFDDQIKRIFSVLPKTRQSIYFSATMTDTLQTLKKL 200
>gi|366986679|ref|XP_003673106.1| hypothetical protein NCAS_0A01550 [Naumovozyma castellii CBS 4309]
gi|342298969|emb|CCC66713.1| hypothetical protein NCAS_0A01550 [Naumovozyma castellii CBS 4309]
Length = 748
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 126/234 (53%), Gaps = 45/234 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
+ +N L L ++K + LG+ +P+PIQ A IP A GKDII A TGSGKT AF +P
Sbjct: 225 YANFNSLSLSRPVLKGLATLGYTKPSPIQSATIPVAL-SGKDIIAGAVTGSGKTAAFMIP 283
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN- 290
+++RLL K A R +++TPTRELA+Q++D K++ K IN
Sbjct: 284 VIERLL-----------------FKSAKIAATRVIVLTPTRELAIQISDVGKKIGKFING 326
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+ VGG++ +QE+ LKARP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 327 ITFGLAVGGLNLRQQEQELKARPDIVIATPGRFIDHIRNSASFNVD--SVEILVIDEADR 384
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
M+E G EL I+ +LP KRQTL+FSAT+
Sbjct: 385 MLEEGFQEELNEIMQLLP------------------------NKRQTLLFSATM 414
>gi|363753372|ref|XP_003646902.1| hypothetical protein Ecym_5326 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890538|gb|AET40085.1| hypothetical protein Ecym_5326 [Eremothecium cymbalariae
DBVPG#7215]
Length = 757
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 152/306 (49%), Gaps = 49/306 (16%)
Query: 171 EFDAW-NELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
E AW N+++L ++++ +LGF PT IQ IP A +G DI+G A TGSGKTLA+G
Sbjct: 187 ELPAWSNKMKLSFFTLQALAKLGFTSPTEIQVQSIPKAL-EGLDIMGKASTGSGKTLAYG 245
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV---- 285
+PI++RL AL+ TPTRELA QVT HL+ V
Sbjct: 246 IPILERLFASTNDKP-------------------IALVFTPTRELAHQVTTHLQNVLGNL 286
Query: 286 AKGINVRVVPIVGGMSTEKQERLL--KARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 343
K + ++ + GG+S +KQERLL + +VV TPGR EL+ E + +
Sbjct: 287 VKKMPYAILSLTGGLSIQKQERLLDYEGSSRIVVATPGRFLELLEKNEDLIKRFAEIGVL 346
Query: 344 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 403
VLDEADR++++GHF E + I L N Q +L+ +K QT++ SAT
Sbjct: 347 VLDEADRLLQDGHFDEFEKIFKHL------NREQ----------KTLKSEKWQTMILSAT 390
Query: 404 IALSADFRKKLKHGSLKLKQSVNGLNSIET----LSERAGMRANVAIVDLTNVSVLANKL 459
S D KL K ++ N +E L + ++ I+D S + ++
Sbjct: 391 --FSIDLFSKLSTTHWKNLKNNKENNEMEAVLKHLMTKISFKSKPVIIDTNPESKITAQV 448
Query: 460 EESFIE 465
+ES IE
Sbjct: 449 KESLIE 454
>gi|282917430|ref|ZP_06325183.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus D139]
gi|282318632|gb|EFB48989.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus D139]
Length = 506
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAERLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|407919354|gb|EKG12604.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 791
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 122/238 (51%), Gaps = 48/238 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ + L ++K + +GF EPTPIQ IP A GKD++G A TGSGKT AF +PI+
Sbjct: 276 SFQHMSLSRPILKGLAAVGFSEPTPIQAKTIPVAL-LGKDVVGGAVTGSGKTAAFVIPIL 334
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKEVAKGINV 291
+RLL Y PK R I+ PTRELA+Q + K++A ++
Sbjct: 335 ERLL-------------------YRPKKVPTTRVAILMPTRELAVQCFNVSKKLAAFTDI 375
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
IVGG S +QE +LK RP++V+ TPGR + M V+ TL VLDEADRM
Sbjct: 376 TFAQIVGGFSLREQENILKQRPDVVIATPGRFIDHMRNSASFAVD--TLEILVLDEADRM 433
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+E+G EL I+ +P K RQT++FSAT+ + D
Sbjct: 434 LEDGFADELNEILTTIP------------------------KSRQTMLFSATMTDTVD 467
>gi|50286247|ref|XP_445552.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661437|sp|Q6FW42.1|DRS1_CANGA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49524857|emb|CAG58463.1| unnamed protein product [Candida glabrata]
Length = 725
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 126/231 (54%), Gaps = 45/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+N+L L +MK + LG+ +P+PIQ A IP A GKDII A TGSGKT AF +PI++
Sbjct: 208 FNDLALSRPVMKGLSNLGYVKPSPIQSATIPIALL-GKDIIAGAVTGSGKTAAFMIPIIE 266
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-NVRV 293
RLL K A R +++TPTRELA+QV D K++ + + N+
Sbjct: 267 RLL-----------------YKPAKVASTRVIVLTPTRELAIQVADVGKKIGQFVSNLTF 309
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
VGG++ +QE++LK RP++V+ TPGR + + V+ ++ V+DEADRM+E
Sbjct: 310 GLAVGGLNLRQQEQMLKTRPDIVIATPGRFIDHIRNSASFNVD--SVEVLVIDEADRMLE 367
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+G EL I+ +LP KRQTL+FSAT+
Sbjct: 368 DGFQDELNEIMSLLP------------------------SKRQTLLFSATM 394
>gi|15667450|dbj|BAB68226.1| putative autoaggregation-mediating protein [Enterococcus faecium]
Length = 210
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 130/254 (51%), Gaps = 55/254 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+KS+ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPML- 60
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
EK P H L+ L+I PTRELA+Q + L + + VRV
Sbjct: 61 --------------------EKIDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRV 100
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLN 157
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 408
G +++ II +P +RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGV 193
Query: 409 DFRKKLKHGSLKLK 422
F K H +K K
Sbjct: 194 KFMKNPHHVKIKRK 207
>gi|449692609|ref|XP_004213103.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like, partial
[Hydra magnipapillata]
Length = 208
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L LH L K +G +PT IQ +CIP G+D IG+A+TGSGKT AF LPI+Q
Sbjct: 5 FTDLGLHEWLNKQCLEMGISKPTEIQVSCIPEIL-SGRDCIGSAKTGSGKTAAFALPIIQ 63
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L E+ P G + ALI+TPTRELA+Q+ D K + K I +
Sbjct: 64 KLSED-------------------PYG-IFALILTPTRELAIQIADQFKALGKSIGLNDA 103
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I+GG+ KQ L +P +V+ TPGRL ++ G K L+ + F VLDEADR++E
Sbjct: 104 VIIGGLDMVKQGMELSNQPHVVIATPGRLASHITSGTKF--SLNKIKFLVLDEADRLLEK 161
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
+L+ I D + KKRQTL+FSATI + + K++
Sbjct: 162 SFENDLEVIFDNIA------------------------KKRQTLLFSATITDAINHLKEV 197
Query: 415 KH 416
H
Sbjct: 198 AH 199
>gi|403217172|emb|CCK71667.1| hypothetical protein KNAG_0H02520 [Kazachstania naganishii CBS
8797]
Length = 754
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 127/233 (54%), Gaps = 45/233 (19%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPI 232
+ +N L L ++K + LG+ +P+PIQ A IP A QGKD+I A TGSGKT AF +PI
Sbjct: 239 ETFNSLSLSRPVLKGLAHLGYTKPSPIQSATIPVAL-QGKDVIAGAVTGSGKTAAFMIPI 297
Query: 233 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 292
++RLL + K R +++TPTRELA+Q++D K++ + ++
Sbjct: 298 IERLLFKPSKV-----------------AMTRVIVLTPTRELAIQISDVAKKIGQFVSGL 340
Query: 293 VVPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ VGG++ +QE+ LKARP++V+ TPGR + + V+ ++ VLDEADRM
Sbjct: 341 TFGLAVGGLNLRQQEQALKARPDIVIATPGRFIDHIRNSASFNVD--SVEILVLDEADRM 398
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+E G EL+ I+ MLP KRQ L+FSAT+
Sbjct: 399 LEEGFQDELKEIMTMLP------------------------SKRQNLLFSATM 427
>gi|444379626|ref|ZP_21178803.1| ATP-dependent RNA helicase [Enterovibrio sp. AK16]
gi|443676355|gb|ELT83059.1| ATP-dependent RNA helicase [Enterovibrio sp. AK16]
Length = 410
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 46/224 (20%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEE 239
LHP L +++ LG+ EPT IQ+ IP +GKD++GAA+TG+GKT AF LP++ +LLE
Sbjct: 9 LHPTLQQTLSELGYSEPTDIQQQAIPKVL-EGKDVMGAAQTGTGKTAAFTLPLIHQLLER 67
Query: 240 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGG 299
KG R LI+TPTRELA QV D + E + +++ V + GG
Sbjct: 68 ------------------GVKGSARVLIVTPTRELAQQVYDKVAEYGQHTSLKCVALYGG 109
Query: 300 MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 359
+ Q+ L +PE++VGTPGRL + + G ++L++L VLDEADRM++ G +
Sbjct: 110 ANINPQKNQLAKKPEIIVGTPGRLLDHLHIGT---LQLNSLDTLVLDEADRMLDMGFISD 166
Query: 360 LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 403
++ ++ +P K+RQTL FSAT
Sbjct: 167 IKRLMKKMP------------------------KERQTLFFSAT 186
>gi|322706999|gb|EFY98578.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Metarhizium
anisopliae ARSEF 23]
Length = 714
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 130/232 (56%), Gaps = 17/232 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E L L+ + R+G+KEPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++
Sbjct: 273 SWEESGLPQRLLDIVDRVGYKEPTPIQRAAIPIAL-QARDLIGVAVTGSGKTAAFLLPLL 331
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ + L E + P ALI+ PTREL Q+ K+ A+ + R
Sbjct: 332 VYISD--------LPPLTEVNKNDGPY----ALILAPTRELVQQIETEAKKFAEPLGFRC 379
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 380 VSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCI---ERRLLVLSQCCYIIMDEADRMID 436
Query: 354 NGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G + I+D LP++N + +E Q + + K RQT++++AT+
Sbjct: 437 LGFEESVNKILDALPVSNEKPDTDDAENAQLMKSYLGSRDKYRQTMMYTATM 488
>gi|452819711|gb|EME26765.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 414
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 46/232 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ EL L ++++ L +PTP Q ACIP + GKDIIG++ETG+GKT++F LPI+
Sbjct: 14 SFEELGLGQWIVETCKALNIMKPTPCQVACIPQTLN-GKDIIGSSETGTGKTMSFVLPIV 72
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+L P G + A+++TPTRELA Q+ D K + +++RV
Sbjct: 73 DKL-------------------SVDPCG-VFAIVLTPTRELAFQIYDQFKAIGNPMSIRV 112
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK-HLVELHTLSFFVLDEADRMI 352
+VGG+ + +Q L+ RP +VV TPGRL +L + + LH++ F VLDEADR++
Sbjct: 113 AVVVGGLESIRQATELENRPHVVVATPGRLADLFTIEDSVERFHLHSIRFLVLDEADRLL 172
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
E+G L +I+D+LP+ RQTLV+SAT+
Sbjct: 173 EDGFASSLSTILDVLPV------------------------NRQTLVYSATM 200
>gi|89074254|ref|ZP_01160744.1| putative ATP-dependent RNA helicase, DEAD box family protein
[Photobacterium sp. SKA34]
gi|89049958|gb|EAR55492.1| putative ATP-dependent RNA helicase, DEAD box family protein
[Photobacterium sp. SKA34]
Length = 427
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 126/235 (53%), Gaps = 37/235 (15%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ L LHP L+K++ LG+ PT +Q+ IP A +G D++ A+TG+GKT AF LP++
Sbjct: 2 SFQSLNLHPNLLKALTDLGYSTPTDVQQQAIPLAL-KGDDVMAGAQTGTGKTAAFTLPLL 60
Query: 234 QRLL---EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
QRL+ + E+ +E + K +RALI+TPTRELA QV D + AK
Sbjct: 61 QRLMTLPSQAEQVSTAVENNQKSRNK------IRALILTPTRELAQQVFDSITTYAKYTE 114
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
++V GG S Q + L A E++V TPGRL + + G L E+ T FVLDEADR
Sbjct: 115 IKVAVAYGGTSMNVQVKALNAGAEILVATPGRLLDHVFNGSVSLSEVET---FVLDEADR 171
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
M++ G ++Q I+ +P +RQTL FSAT +
Sbjct: 172 MLDMGFIVDIQRIMKRMP------------------------AERQTLFFSATFS 202
>gi|19113831|ref|NP_592919.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1175401|sp|Q09719.1|DBP10_SCHPO RecName: Full=ATP-dependent RNA helicase dbp10
gi|914885|emb|CAA90465.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe]
Length = 848
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 128/239 (53%), Gaps = 47/239 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + L+ L+++I++ GFK PTPIQ+ IP +G+D++G A TGSGKT AF +P+++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLL-EGRDVVGMARTGSGKTAAFVIPMIE 129
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L + + RALI++P RELALQ +K+ +KG ++R V
Sbjct: 130 HL------------------KSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSV 171
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG+S E+Q LL +P++VV TPGR L + +EL ++ + V DEADR+ E
Sbjct: 172 AIVGGVSLEEQFSLLSGKPDIVVATPGRFLHLKV---EMKLELSSIEYVVFDEADRLFEM 228
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS-ADFRK 412
G +L I+ LP + RQTL+FSAT+ + DF K
Sbjct: 229 GFAAQLTEILHALPTS------------------------RQTLLFSATLPRTLVDFAK 263
>gi|409046062|gb|EKM55542.1| hypothetical protein PHACADRAFT_173680 [Phanerochaete carnosa
HHB-10118-sp]
Length = 668
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 128/238 (53%), Gaps = 16/238 (6%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
+I +W E + LL+ I R+G+KEP+PIQ+ IP Q +DIIG AETGSGKT
Sbjct: 235 QIPHPLRSWTESDIPQLLLDVIERIGYKEPSPIQRQAIPIGL-QNRDIIGIAETGSGKTA 293
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 286
AF +P++ + L +E P +LI+ PTRELA Q+ K+ A
Sbjct: 294 AFVIPMLSFI--------SKLPLFTDENRHLGPY----SLILAPTRELAQQIESETKKFA 341
Query: 287 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
+ V IVGG + E+Q+ L+A E+++ TPGRL +++ E+H++ L + V+D
Sbjct: 342 GSLGFTCVSIVGGRAVEEQQFNLRAGAEIIIATPGRLKDVI---ERHVIVLSQCRYIVMD 398
Query: 347 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
EADRM+ G +L I+D LP E Q EQ + + R T +FSAT+
Sbjct: 399 EADRMVNLGFEADLTFILDKLPSDTMEGEDQGEQMDIDGETMIKKGRTRVTTLFSATM 456
>gi|300690871|ref|YP_003751866.1| DEAD/DEAH box helicase [Ralstonia solanacearum PSI07]
gi|299077931|emb|CBJ50571.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
PSI07]
gi|344167288|emb|CCA79493.1| ATP-dependent RNA helicase, deaD-box family [blood disease
bacterium R229]
Length = 495
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 133/258 (51%), Gaps = 48/258 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
S FD + LHP +++++ G+ PTPIQ A IP G+D++GAA+TG+GKT F
Sbjct: 14 SVTFDTFG---LHPDILRALAESGYTRPTPIQAAAIPVVV-AGRDVMGAAQTGTGKTAGF 69
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAK 287
LPI+Q LL E + +P H +RALI+TPTRELA QV D++ + K
Sbjct: 70 SLPIIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYGK 116
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+R + GG+ Q L+ E++V TPGRL + + ++ V L + VLDE
Sbjct: 117 YTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLDE 173
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 174 ADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSPE 209
Query: 408 ADFRKKLKHGSLKLKQSV 425
KKL L+ Q++
Sbjct: 210 I---KKLAASYLRHPQTI 224
>gi|300312872|ref|YP_003776964.1| ATP-dependent RNA helicase [Herbaspirillum seropedicae SmR1]
gi|300075657|gb|ADJ65056.1| ATP-dependent RNA helicase protein [Herbaspirillum seropedicae
SmR1]
Length = 487
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 129/243 (53%), Gaps = 47/243 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + L P ++K++ G+ PTPIQ IP QG+D++GAA+TG+GKT F LPI+Q
Sbjct: 18 FEDFGLSPDILKALAEQGYVHPTPIQAQAIPVVL-QGRDVMGAAQTGTGKTAGFSLPIIQ 76
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
RLL+ + +P H +RALI+TPTRELA QV D++ + +R
Sbjct: 77 RLLQHASHSA-------------SPARHPVRALILTPTRELADQVADNVAAYCRFTPLRS 123
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG+ Q +L+A E+V+ TPGRL + + ++ V L V+DEADRM++
Sbjct: 124 TVVFGGVDMAPQTAILRAGVEIVIATPGRLLDHV---QQKTVNLSQTQILVMDEADRMLD 180
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 408
G +LQ II++LP K+RQ L+FSAT + L+A
Sbjct: 181 MGFLPDLQRIINLLP------------------------KQRQNLLFSATFSPEIKKLAA 216
Query: 409 DFR 411
F+
Sbjct: 217 SFQ 219
>gi|322701026|gb|EFY92777.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Metarhizium
acridum CQMa 102]
Length = 712
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 130/232 (56%), Gaps = 17/232 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E L L+ + R+G+KEPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++
Sbjct: 272 SWEESGLPQRLLDIVDRVGYKEPTPIQRAAIPIAL-QARDLIGVAVTGSGKTAAFLLPLL 330
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ + L E + P ALI+ PTREL Q+ K+ A+ + R
Sbjct: 331 VYISD--------LPPLTEVNKNDGPY----ALILAPTRELVQQIETEAKKFAEPLGFRC 378
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 379 VSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCI---ERRLLVLSQCCYIIMDEADRMID 435
Query: 354 NGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G + I+D LP++N + +E Q + + K RQT++++AT+
Sbjct: 436 LGFEESVNKILDALPVSNEKPDTDDAENAQLMKSYLGSRDKYRQTMMYTATM 487
>gi|239825779|ref|YP_002948403.1| DEAD/DEAH box helicase [Geobacillus sp. WCH70]
gi|239806072|gb|ACS23137.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. WCH70]
Length = 466
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 130/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL L LMK+I R+GF+E TPIQ IP + Q KD+IG A+TG+GKT AFG+P+++
Sbjct: 4 FHELGLSNELMKAIRRMGFEETTPIQAETIPLSL-QNKDVIGQAQTGTGKTAAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + E ++ L++ PTRELA+QV++ L ++ VRV+
Sbjct: 63 KVDVKNEA--------------------IQGLVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG E+Q R LK RP ++VGTPGR+ + ++ L +HT+ VLDEAD M+
Sbjct: 103 PIYGGQDIERQIRALKKRPHIIVGTPGRIIDHINRKTLRLDNVHTV---VLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P +KRQTL+FSAT+
Sbjct: 160 GFIDDIEAILSNVP------------------------EKRQTLLFSATM 185
>gi|266619246|ref|ZP_06112181.1| ATP-dependent RNA helicase RhlE [Clostridium hathewayi DSM 13479]
gi|288869241|gb|EFD01540.1| ATP-dependent RNA helicase RhlE [Clostridium hathewayi DSM 13479]
Length = 432
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 151/289 (52%), Gaps = 67/289 (23%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L L+K++ G+ P+PIQ+ IP GKD++G A+TG+GKT AF LPI+Q
Sbjct: 3 FKDLQLSAPLLKALEEKGYTTPSPIQEKAIPHVL-AGKDVLGCAQTGTGKTAAFALPIIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L+ +K K++ K +R+LI+TPTRELALQ+ ++ KE VR
Sbjct: 62 NLMRPSDK-------------KHS-KRVIRSLILTPTRELALQIAENFKEYGSHTPVRCA 107
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S Q + L+ +++V TPGRL +L+ GE + L + FVLDEADRM++
Sbjct: 108 VIFGGVSAVPQIKELQRGIDILVATPGRLNDLIHQGE---ISLSHVEMFVLDEADRMLDM 164
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
G +++ II +LP+ K+QTL+FSAT+
Sbjct: 165 GFIHDVKKIISLLPV------------------------KKQTLLFSATMP--------- 191
Query: 415 KHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEESF 463
I+ L+E+ + N A+V++T VS + + +E+S
Sbjct: 192 --------------PEIQALTEK--LLHNPAVVEVTPVSSIVDLIEDSL 224
>gi|340923930|gb|EGS18833.1| hypothetical protein CTHT_0054430 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 709
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 148/288 (51%), Gaps = 27/288 (9%)
Query: 118 QKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNE 177
Q +++KNL +KK ++ K + + +E+ +S I W E
Sbjct: 231 QLKEQKNLGKHWSEKKLEEMKERDWRIFKENFGIS----------TKGGSIPNPMRNWEE 280
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLL 237
L L+ +YR+G+ EPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++ +
Sbjct: 281 SGLPRRLLDIVYRVGYDEPTPIQRAAIPIAL-QARDLIGVAVTGSGKTAAFLLPLLVYIS 339
Query: 238 EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIV 297
E L E + P ALI+ PTREL Q+ ++ A + VV IV
Sbjct: 340 E--------LPPLTEYNKNDGPY----ALILAPTRELVQQIESEARKFADPLGFTVVSIV 387
Query: 298 GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 357
GG S E+Q L+ E++V TPGRL + + E+ L+ + ++DEADRMI+ G
Sbjct: 388 GGHSLEEQAFALRNGAEIIVATPGRLVDCI---ERRLLVFSQCCYVIMDEADRMIDQGFE 444
Query: 358 RELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
L I+D LP++N + + +E Q + + RQT++++AT+
Sbjct: 445 EPLTKILDALPVSNEKPDTEDAENPQLMSRYLGGRDRYRQTMMYTATM 492
>gi|356522085|ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Glycine
max]
Length = 701
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 135/241 (56%), Gaps = 27/241 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
++I +WNE +L L+K++ + G+K P+PIQ A IP Q +D+IG AETGSGKT
Sbjct: 274 SKIPRPMRSWNESKLTSELLKAVEKAGYKTPSPIQMAAIPLGLQQ-RDVIGIAETGSGKT 332
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF LP++ + L E+ E P A+++ PTRELA Q+ D +
Sbjct: 333 AAFVLPMLSYITR--------LPPISEDNEAEGPY----AVVMAPTRELAQQIEDETVKF 380
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 381 AQYLGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCL---ERRYAVLNQCNYVVL 437
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSAT 403
DEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSAT
Sbjct: 438 DEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSAT 488
Query: 404 I 404
+
Sbjct: 489 M 489
>gi|399926673|ref|ZP_10784031.1| DEAD/DEAH box helicase [Myroides injenensis M09-0166]
Length = 414
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 133/233 (57%), Gaps = 43/233 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L+ ++++I LG+KEPTPIQ+ IP + KD+IG A+TG+GKT AF +PI+
Sbjct: 3 FEDLHLNKNILRAIEELGYKEPTPIQQKVIPLVLEE-KDLIGCAQTGTGKTAAFAMPIIH 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L K G +K ++A + LIITPTRELALQ+ D+ + AK NV +
Sbjct: 62 YL----HKIGNT--KKAKKA---------KVLIITPTRELALQIHDNFTQYAKYTNVTSI 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGMS + Q L ++++GTPGRL +L +KHL +L +L + VLDEAD M++
Sbjct: 107 TLYGGMSIKPQIEQLNKGADVIIGTPGRLLDLYK--QKHL-DLDSLHYLVLDEADLMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
G +++ +I + P SN RQTL+FSAT+ L+
Sbjct: 164 GFIDDVKKLIQLTP----SN--------------------RQTLLFSATMPLA 192
>gi|255561546|ref|XP_002521783.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223538996|gb|EEF40593.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 714
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 135/241 (56%), Gaps = 27/241 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
++I +W E +L P L+K++ R G+++P+PIQ A IP Q +D+IG AETGSGKT
Sbjct: 287 SKIPRPMRSWPESKLTPELLKAVERAGYEKPSPIQMAAIPLGLQQ-RDVIGIAETGSGKT 345
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF LP++ + L E+ E P A+++ PTRELA Q+ D +
Sbjct: 346 AAFVLPMLTYI--------SRLPPMSEDNEAEGPY----AVVMAPTRELAQQIEDETVKF 393
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 394 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLLDCL---ERRYAVLNQCNYVVL 450
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSAT 403
DEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSAT
Sbjct: 451 DEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSAT 501
Query: 404 I 404
+
Sbjct: 502 M 502
>gi|423721477|ref|ZP_17695659.1| DEAD/DEAH box helicase family protein [Geobacillus
thermoglucosidans TNO-09.020]
gi|383365528|gb|EID42823.1| DEAD/DEAH box helicase family protein [Geobacillus
thermoglucosidans TNO-09.020]
Length = 465
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 130/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L LMK+I R+GF+E TPIQ IP + Q KD+IG A+TG+GKT AFG+P+++
Sbjct: 4 FYELGLSNELMKAIRRMGFEETTPIQAETIPLSL-QNKDVIGQAQTGTGKTAAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + EA ++ L++ PTRELA+QV++ L ++ VRV+
Sbjct: 63 KV------------DVTNEA--------IQGLVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK RP ++VGTPGR+ + ++ HL +HT+ VLDEAD M+
Sbjct: 103 PIYGGQDIGRQIRALKKRPHIIVGTPGRIIDHINRKTLHLENVHTV---VLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P +KRQTL+FSAT+
Sbjct: 160 GFIDDIEAILSNVP------------------------EKRQTLLFSATM 185
>gi|19705271|ref|NP_602766.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19713234|gb|AAL94065.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 528
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKILKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFVEDIEKI---LTFTN 179
>gi|421145364|ref|ZP_15605243.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395488237|gb|EJG09113.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 528
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFIEDIEKI---LTFTN 179
>gi|297735665|emb|CBI18352.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 134/241 (55%), Gaps = 27/241 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
++I +W E +L P L+K++ R G+K P+PIQ A IP Q +D+IG AETGSGKT
Sbjct: 203 SKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQ-RDVIGIAETGSGKT 261
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 262 AAFVLPMLTYI--------SRLPPISEENEAEGPY----AVVMAPTRELAQQIEDETVKF 309
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 310 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVL 366
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSAT 403
DEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSAT
Sbjct: 367 DEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSAT 417
Query: 404 I 404
+
Sbjct: 418 M 418
>gi|312112527|ref|YP_003990843.1| DEAD/DEAH box helicase [Geobacillus sp. Y4.1MC1]
gi|336236996|ref|YP_004589612.1| DEAD/DEAH box helicase [Geobacillus thermoglucosidasius C56-YS93]
gi|311217628|gb|ADP76232.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. Y4.1MC1]
gi|335363851|gb|AEH49531.1| DEAD/DEAH box helicase domain protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 465
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 130/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L LMK+I R+GF+E TPIQ IP + Q KD+IG A+TG+GKT AFG+P+++
Sbjct: 4 FYELGLSNELMKAIRRMGFEETTPIQAETIPLSL-QNKDVIGQAQTGTGKTAAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + EA ++ L++ PTRELA+QV++ L ++ VRV+
Sbjct: 63 KV------------DVTNEA--------IQGLVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK RP ++VGTPGR+ + ++ HL +HT+ VLDEAD M+
Sbjct: 103 PIYGGQDIGRQIRALKKRPHIIVGTPGRIIDHINRKTLHLENVHTV---VLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P +KRQTL+FSAT+
Sbjct: 160 GFIDDIEAILSNVP------------------------EKRQTLLFSATM 185
>gi|418315814|ref|ZP_12927266.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21340]
gi|365242402|gb|EHM83109.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21340]
Length = 506
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|387603359|ref|YP_005734880.1| cold-shock deAd box protein a (atp-dependent rna helicasedead)
[Staphylococcus aureus subsp. aureus ST398]
gi|404479359|ref|YP_006710789.1| helicase [Staphylococcus aureus 08BA02176]
gi|418310467|ref|ZP_12922007.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21331]
gi|283471297|emb|CAQ50508.1| cold-shock deAd box protein a (atp-dependent rna helicasedead)
[Staphylococcus aureus subsp. aureus ST398]
gi|365236654|gb|EHM77538.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21331]
gi|404440848|gb|AFR74041.1| putative helicase [Staphylococcus aureus 08BA02176]
Length = 506
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|50419843|ref|XP_458454.1| DEHA2C17534p [Debaryomyces hansenii CBS767]
gi|74659385|sp|Q6BTL5.1|DRS1_DEBHA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49654120|emb|CAG86536.1| DEHA2C17534p [Debaryomyces hansenii CBS767]
Length = 771
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 135/251 (53%), Gaps = 51/251 (20%)
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIG 216
D EE ++ ++ T F + L+L ++K + +LG+ +P+PIQ ACIP A GKDI+
Sbjct: 245 DEEEATTAKKQLHTTFQS---LQLSRPVLKGLSQLGYTKPSPIQSACIPIAL-LGKDIVA 300
Query: 217 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTREL 274
A TGSGKT A+ +PI++RLL Y P R +++ PTREL
Sbjct: 301 GAVTGSGKTAAYMIPIIERLL-------------------YKPAKISSTRVIVLAPTREL 341
Query: 275 ALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 333
A+QV D K++ + + N+ VGG++ +QE+ LK RP++V+ TPGRL + +
Sbjct: 342 AIQVCDVGKKIGQFVNNLNFGLAVGGLNLRQQEQQLKTRPDIVIATPGRLIDHIRNSPSF 401
Query: 334 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 393
++ +L V+DEADRM++ G EL I+ ++P R
Sbjct: 402 SID--SLEVLVIDEADRMLDEGFQAELTEILSLIP-----------------------RH 436
Query: 394 KRQTLVFSATI 404
KRQTL++SAT+
Sbjct: 437 KRQTLLYSATM 447
>gi|356565647|ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
[Glycine max]
gi|356565649|ref|XP_003551051.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 2
[Glycine max]
Length = 706
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 135/241 (56%), Gaps = 27/241 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
++I +WNE +L L+K++ + G+K P+PIQ A IP Q +D+IG AETGSGKT
Sbjct: 279 SKIPRPMRSWNESKLTNELLKAVEKAGYKTPSPIQMAAIPLGLQQ-RDVIGIAETGSGKT 337
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF LP++ + L E+ E P A+++ PTRELA Q+ D +
Sbjct: 338 AAFVLPMLSYITR--------LPPISEDNEAEGPY----AVVMAPTRELAQQIEDETVKF 385
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 386 AQYLGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCL---ERRYAVLNQCNYVVL 442
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSAT 403
DEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSAT
Sbjct: 443 DEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSAT 493
Query: 404 I 404
+
Sbjct: 494 M 494
>gi|417898362|ref|ZP_12542283.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21259]
gi|341848722|gb|EGS89882.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21259]
Length = 506
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 133/246 (54%), Gaps = 53/246 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQQ 195
Query: 410 FRKKLK 415
F K K
Sbjct: 196 FMKSPK 201
>gi|297589855|ref|ZP_06948495.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus MN8]
gi|297576983|gb|EFH95697.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus MN8]
Length = 517
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 15 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 72
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 73 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 112
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 113 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 169
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 170 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 196
>gi|253733085|ref|ZP_04867250.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
TCH130]
gi|253728993|gb|EES97722.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
TCH130]
Length = 517
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 15 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 72
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 73 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 112
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 113 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 169
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 170 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 196
>gi|296328514|ref|ZP_06871033.1| DEAD/DEAH box family ATP-dependent RNA helicase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296154323|gb|EFG95122.1| DEAD/DEAH box family ATP-dependent RNA helicase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 528
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFVEDIEKI---LTFTN 179
>gi|221141602|ref|ZP_03566095.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|384862733|ref|YP_005745453.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|302751962|gb|ADL66139.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus str. JKD6008]
Length = 506
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 133/246 (54%), Gaps = 53/246 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTILFSATMPKAIQALVQQ 195
Query: 410 FRKKLK 415
F K K
Sbjct: 196 FMKSPK 201
>gi|386729768|ref|YP_006196151.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
71193]
gi|418979357|ref|ZP_13527153.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
DR10]
gi|379992788|gb|EIA14238.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
DR10]
gi|384231061|gb|AFH70308.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
71193]
Length = 517
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 15 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 72
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 73 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 112
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 113 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 169
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 170 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 196
>gi|253731082|ref|ZP_04865247.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|297210100|ref|ZP_06926493.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|300910462|ref|ZP_07127914.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus TCH70]
gi|304379262|ref|ZP_07362001.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|384867000|ref|YP_005747196.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus TCH60]
gi|422743011|ref|ZP_16797007.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422745973|ref|ZP_16799908.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|424771982|ref|ZP_18199098.1| putative DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
aureus subsp. aureus CM05]
gi|253725209|gb|EES93938.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|296885300|gb|EFH24240.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|300888304|gb|EFK83495.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus TCH70]
gi|304342121|gb|EFM08021.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312437505|gb|ADQ76576.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus TCH60]
gi|320140748|gb|EFW32600.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143723|gb|EFW35500.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|402347512|gb|EJU82540.1| putative DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
aureus subsp. aureus CM05]
gi|408424041|emb|CCJ11452.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408426030|emb|CCJ13417.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408428018|emb|CCJ15381.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408430007|emb|CCJ27172.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408431993|emb|CCJ19308.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408433988|emb|CCJ21273.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408435980|emb|CCJ23240.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
gi|408437963|emb|CCJ25206.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus ST228]
Length = 517
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 15 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 72
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 73 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 112
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 113 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 169
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 170 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 196
>gi|402574642|ref|YP_006623985.1| DNA/RNA helicase [Desulfosporosinus meridiei DSM 13257]
gi|402255839|gb|AFQ46114.1| DNA/RNA helicase, superfamily II [Desulfosporosinus meridiei DSM
13257]
Length = 500
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 129/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L L+M+SI +GF+E TPIQ+ IP+A +GKD+IG A+TG+GKT A+G+P+++
Sbjct: 4 FTDLNLSELVMRSIINMGFEETTPIQEQTIPSAM-EGKDLIGQAQTGTGKTAAYGIPLVE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
R++ + E +++ +++ PTRELA+QV + L ++ + + +
Sbjct: 63 RIMGQSE--------------------NIQGIVLAPTRELAVQVAEELNKIGQFKRIHAL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG + Q R LK RP ++V TPGRL + M + + LH + VLDEAD M+
Sbjct: 103 PIYGGQGIDWQIRALKKRPHIIVATPGRLMDHM---RRKTIRLHDIKIVVLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P ++RQTL+FSAT+
Sbjct: 160 GFLEDIETILKEVP------------------------EERQTLLFSATM 185
>gi|34763211|ref|ZP_00144175.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|256846171|ref|ZP_05551629.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_36A2]
gi|27887121|gb|EAA24228.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|256719730|gb|EEU33285.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_36A2]
Length = 528
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFVEDIEKI---LTFTN 179
>gi|15925071|ref|NP_372605.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927656|ref|NP_375189.1| hypothetical protein SA1885 [Staphylococcus aureus subsp. aureus
N315]
gi|21283733|ref|NP_646821.1| hypothetical protein MW2004 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486874|ref|YP_044095.1| helicase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57650754|ref|YP_186888.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus COL]
gi|87161548|ref|YP_494683.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195982|ref|YP_500795.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268533|ref|YP_001247476.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus JH9]
gi|150394597|ref|YP_001317272.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus JH1]
gi|151222197|ref|YP_001333019.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156980397|ref|YP_001442656.1| hypothetical protein SAHV_2066 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161510293|ref|YP_001575952.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253316240|ref|ZP_04839453.1| putative helicase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006870|ref|ZP_05145471.2| putative helicase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257793840|ref|ZP_05642819.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9781]
gi|258407008|ref|ZP_05680158.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9763]
gi|258422029|ref|ZP_05684946.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9719]
gi|258433601|ref|ZP_05688674.1| ATP-dependent RNA helicase [Staphylococcus aureus A9299]
gi|258440496|ref|ZP_05690666.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258445704|ref|ZP_05693882.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus A6300]
gi|258450158|ref|ZP_05698253.1| ATP-dependent RNA helicase [Staphylococcus aureus A6224]
gi|258453208|ref|ZP_05701199.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus A5948]
gi|258453387|ref|ZP_05701369.1| ATP-dependent RNA helicase [Staphylococcus aureus A5937]
gi|262049250|ref|ZP_06022125.1| hypothetical protein SAD30_0461 [Staphylococcus aureus D30]
gi|262052494|ref|ZP_06024692.1| hypothetical protein SA930_0070 [Staphylococcus aureus 930918-3]
gi|269203717|ref|YP_003282986.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus subsp.
aureus ED98]
gi|282895275|ref|ZP_06303488.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A8117]
gi|282911647|ref|ZP_06319446.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282923070|ref|ZP_06330755.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9765]
gi|282929553|ref|ZP_06336950.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A10102]
gi|284025116|ref|ZP_06379514.1| putative helicase [Staphylococcus aureus subsp. aureus 132]
gi|294850566|ref|ZP_06791293.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9754]
gi|295407012|ref|ZP_06816814.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A8819]
gi|296275711|ref|ZP_06858218.1| putative helicase [Staphylococcus aureus subsp. aureus MR1]
gi|297246745|ref|ZP_06930562.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A8796]
gi|379015208|ref|YP_005291444.1| helicase [Staphylococcus aureus subsp. aureus VC40]
gi|379021757|ref|YP_005298419.1| cold-shock DEAD-box protein A [Staphylococcus aureus subsp. aureus
M013]
gi|384865266|ref|YP_005750625.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|384870631|ref|YP_005753345.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
T0131]
gi|385782321|ref|YP_005758492.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus
11819-97]
gi|386831664|ref|YP_006238318.1| putative helicase [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|387143797|ref|YP_005732191.1| putative helicase [Staphylococcus aureus subsp. aureus TW20]
gi|387151207|ref|YP_005742771.1| Cold-shock DEAD-box protein A [Staphylococcus aureus 04-02981]
gi|387781060|ref|YP_005755858.1| putative helicase [Staphylococcus aureus subsp. aureus LGA251]
gi|415688401|ref|ZP_11452116.1| putative helicase [Staphylococcus aureus subsp. aureus CGS01]
gi|415694064|ref|ZP_11455644.1| putative helicase [Staphylococcus aureus subsp. aureus CGS03]
gi|416841693|ref|ZP_11904548.1| ATP-dependent RNA helicase [Staphylococcus aureus O11]
gi|416847139|ref|ZP_11906948.1| ATP-dependent RNA helicase [Staphylococcus aureus O46]
gi|417650388|ref|ZP_12300160.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21189]
gi|417651619|ref|ZP_12301379.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21172]
gi|417655380|ref|ZP_12305093.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21193]
gi|417799422|ref|ZP_12446562.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21310]
gi|417803227|ref|ZP_12450272.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21318]
gi|417892680|ref|ZP_12536727.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21201]
gi|417897497|ref|ZP_12541428.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21235]
gi|417900259|ref|ZP_12544149.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21266]
gi|417905571|ref|ZP_12549379.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21269]
gi|418277254|ref|ZP_12891868.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21178]
gi|418286656|ref|ZP_12899297.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21209]
gi|418313951|ref|ZP_12925433.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21334]
gi|418319265|ref|ZP_12930649.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21232]
gi|418320043|ref|ZP_12931407.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus VCU006]
gi|418425251|ref|ZP_12998345.1| hypothetical protein MQA_01557 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418428143|ref|ZP_13001132.1| hypothetical protein MQC_01722 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418431028|ref|ZP_13003930.1| hypothetical protein MQE_02589 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418434933|ref|ZP_13006785.1| hypothetical protein MQG_02595 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418437701|ref|ZP_13009479.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS5]
gi|418440630|ref|ZP_13012317.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS6]
gi|418443605|ref|ZP_13015192.1| hypothetical protein MQM_02704 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418446602|ref|ZP_13018064.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS8]
gi|418449687|ref|ZP_13021059.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS9]
gi|418452527|ref|ZP_13023850.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS10]
gi|418455483|ref|ZP_13026734.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418458359|ref|ZP_13029550.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS11b]
gi|418562003|ref|ZP_13126472.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21262]
gi|418567928|ref|ZP_13132287.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21272]
gi|418571317|ref|ZP_13135553.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21283]
gi|418572707|ref|ZP_13136913.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21333]
gi|418580004|ref|ZP_13144094.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1114]
gi|418599110|ref|ZP_13162606.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21343]
gi|418638750|ref|ZP_13201033.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-3]
gi|418641112|ref|ZP_13203326.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-24]
gi|418645440|ref|ZP_13207562.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-55]
gi|418646512|ref|ZP_13208614.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-88]
gi|418649117|ref|ZP_13211147.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-91]
gi|418652298|ref|ZP_13214266.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-99]
gi|418655867|ref|ZP_13217699.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-105]
gi|418658669|ref|ZP_13220382.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-111]
gi|418661301|ref|ZP_13222893.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-122]
gi|418871169|ref|ZP_13425556.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-125]
gi|418875945|ref|ZP_13430194.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC93]
gi|418878939|ref|ZP_13433170.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1165]
gi|418881777|ref|ZP_13435989.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1213]
gi|418884407|ref|ZP_13438597.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1769]
gi|418887111|ref|ZP_13441254.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1150]
gi|418895677|ref|ZP_13449768.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1057]
gi|418904421|ref|ZP_13458458.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1770]
gi|418907013|ref|ZP_13461034.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC345D]
gi|418912631|ref|ZP_13466608.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG547]
gi|418920910|ref|ZP_13474838.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC348]
gi|418926494|ref|ZP_13480390.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG2018]
gi|418929425|ref|ZP_13483309.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1612]
gi|418932399|ref|ZP_13486227.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1750]
gi|418935062|ref|ZP_13488879.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC128]
gi|418947874|ref|ZP_13500213.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-157]
gi|418950869|ref|ZP_13503007.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-160]
gi|418955800|ref|ZP_13507736.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-189]
gi|418989148|ref|ZP_13536816.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1835]
gi|418991998|ref|ZP_13539656.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1096]
gi|419774795|ref|ZP_14300752.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus CO-23]
gi|419783577|ref|ZP_14309361.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-M]
gi|421150952|ref|ZP_15610603.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|424786070|ref|ZP_18212863.1| Cold-shock DEAD-box protein A [Staphylococcus aureus CN79]
gi|440707003|ref|ZP_20887718.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21282]
gi|440735442|ref|ZP_20915048.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus DSM 20231]
gi|443637665|ref|ZP_21121736.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21236]
gi|443640144|ref|ZP_21124139.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21196]
gi|448742179|ref|ZP_21724131.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus
KT/314250]
gi|448743158|ref|ZP_21725070.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus KT/Y21]
gi|81648913|sp|Q6G7M9.1|Y1985_STAAS RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SAS1985
gi|81694077|sp|Q5HEB9.1|Y2072_STAAC RecName: Full=Probable DEAD-box ATP-dependent RNA helicase
SACOL2072
gi|81704263|sp|Q7A0D2.1|Y2004_STAAW RecName: Full=Probable DEAD-box ATP-dependent RNA helicase MW2004
gi|81705333|sp|Q7A4G0.1|Y1885_STAAN RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SA1885
gi|81781186|sp|Q99SH6.1|Y2081_STAAM RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SAV2081
gi|122538977|sp|Q2FWH5.1|Y2316_STAA8 RecName: Full=Probable DEAD-box ATP-dependent RNA helicase
SAOUHSC_02316
gi|123484971|sp|Q2FF45.1|Y2037_STAA3 RecName: Full=Probable DEAD-box ATP-dependent RNA helicase
SAUSA300_2037
gi|13701876|dbj|BAB43168.1| SA1885 [Staphylococcus aureus subsp. aureus N315]
gi|14247854|dbj|BAB58243.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
Mu50]
gi|21205175|dbj|BAB95869.1| MW2004 [Staphylococcus aureus subsp. aureus MW2]
gi|49245317|emb|CAG43792.1| putative helicase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57284940|gb|AAW37034.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus COL]
gi|87127522|gb|ABD22036.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203540|gb|ABD31350.1| ATP-dependent RNA helicase, DEAD box family, putative
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147741602|gb|ABQ49900.1| DEAD/DEAH box helicase domain protein [Staphylococcus aureus subsp.
aureus JH9]
gi|149947049|gb|ABR52985.1| DEAD/DEAH box helicase domain protein [Staphylococcus aureus subsp.
aureus JH1]
gi|150374997|dbj|BAF68257.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156722532|dbj|BAF78949.1| hypothetical protein SAHV_2066 [Staphylococcus aureus subsp. aureus
Mu3]
gi|160369102|gb|ABX30073.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257787812|gb|EEV26152.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9781]
gi|257841341|gb|EEV65785.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9763]
gi|257841929|gb|EEV66361.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9719]
gi|257849332|gb|EEV73311.1| ATP-dependent RNA helicase [Staphylococcus aureus A9299]
gi|257852565|gb|EEV76483.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257855543|gb|EEV78480.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus A6300]
gi|257856632|gb|EEV79538.1| ATP-dependent RNA helicase [Staphylococcus aureus A6224]
gi|257859154|gb|EEV82011.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus A5948]
gi|257864368|gb|EEV87114.1| ATP-dependent RNA helicase [Staphylococcus aureus A5937]
gi|259159615|gb|EEW44661.1| hypothetical protein SA930_0070 [Staphylococcus aureus 930918-3]
gi|259162615|gb|EEW47182.1| hypothetical protein SAD30_0461 [Staphylococcus aureus D30]
gi|262076007|gb|ACY11980.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus subsp.
aureus ED98]
gi|269941681|emb|CBI50088.1| putative helicase [Staphylococcus aureus subsp. aureus TW20]
gi|282324412|gb|EFB54725.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282589032|gb|EFB94136.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A10102]
gi|282593261|gb|EFB98258.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9765]
gi|282762348|gb|EFC02495.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A8117]
gi|285817746|gb|ADC38233.1| Cold-shock DEAD-box protein A [Staphylococcus aureus 04-02981]
gi|294822586|gb|EFG39028.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A9754]
gi|294968037|gb|EFG44064.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A8819]
gi|297176405|gb|EFH35677.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus A8796]
gi|312830433|emb|CBX35275.1| DEAD/DEAH box helicase family protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315128752|gb|EFT84752.1| putative helicase [Staphylococcus aureus subsp. aureus CGS03]
gi|315196987|gb|EFU27329.1| putative helicase [Staphylococcus aureus subsp. aureus CGS01]
gi|323439203|gb|EGA96930.1| ATP-dependent RNA helicase [Staphylococcus aureus O11]
gi|323442419|gb|EGB00048.1| ATP-dependent RNA helicase [Staphylococcus aureus O46]
gi|329314766|gb|AEB89179.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
T0131]
gi|329724041|gb|EGG60565.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21189]
gi|329726361|gb|EGG62829.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21172]
gi|329729332|gb|EGG65740.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21193]
gi|334272865|gb|EGL91220.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21318]
gi|334273753|gb|EGL92092.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21310]
gi|341839595|gb|EGS81175.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21235]
gi|341843034|gb|EGS84266.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21269]
gi|341848939|gb|EGS90094.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21266]
gi|341857246|gb|EGS98062.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21201]
gi|344178162|emb|CCC88648.1| putative helicase [Staphylococcus aureus subsp. aureus LGA251]
gi|359831066|gb|AEV79044.1| Cold-shock DEAD-box protein A [Staphylococcus aureus subsp. aureus
M013]
gi|364523310|gb|AEW66060.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 11819-97]
gi|365165869|gb|EHM57617.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21209]
gi|365173732|gb|EHM64218.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21178]
gi|365228359|gb|EHM69543.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus VCU006]
gi|365234565|gb|EHM75495.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21334]
gi|365241002|gb|EHM81759.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21232]
gi|371974841|gb|EHO92156.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21262]
gi|371980485|gb|EHO97691.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21283]
gi|371981117|gb|EHO98304.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21272]
gi|371984051|gb|EHP01178.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21333]
gi|374363905|gb|AEZ38010.1| helicase [Staphylococcus aureus subsp. aureus VC40]
gi|374398160|gb|EHQ69350.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21343]
gi|375019875|gb|EHS13425.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-24]
gi|375020751|gb|EHS14267.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-3]
gi|375022082|gb|EHS15574.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-99]
gi|375022959|gb|EHS16425.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-55]
gi|375030376|gb|EHS23693.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-91]
gi|375032669|gb|EHS25895.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-88]
gi|375035253|gb|EHS28383.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-105]
gi|375037800|gb|EHS30808.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-111]
gi|375039092|gb|EHS32036.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-122]
gi|375369103|gb|EHS72994.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-125]
gi|375370525|gb|EHS74330.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-189]
gi|375374056|gb|EHS77700.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-157]
gi|375375282|gb|EHS78872.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-160]
gi|377692852|gb|EHT17231.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1165]
gi|377692975|gb|EHT17352.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1057]
gi|377693343|gb|EHT17715.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1114]
gi|377711481|gb|EHT35712.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1750]
gi|377713240|gb|EHT37449.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1769]
gi|377715676|gb|EHT39863.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1835]
gi|377721138|gb|EHT45279.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG547]
gi|377721406|gb|EHT45538.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1096]
gi|377723840|gb|EHT47961.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1150]
gi|377729773|gb|EHT53856.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1213]
gi|377736617|gb|EHT60632.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1612]
gi|377739857|gb|EHT63857.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1770]
gi|377741345|gb|EHT65334.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG2018]
gi|377761469|gb|EHT85340.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC345D]
gi|377762455|gb|EHT86318.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC348]
gi|377768371|gb|EHT92154.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC93]
gi|377769295|gb|EHT93069.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC128]
gi|383364874|gb|EID42179.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-M]
gi|383971463|gb|EID87538.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus CO-23]
gi|385197056|emb|CCG16701.1| putative helicase [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|387716292|gb|EIK04351.1| hypothetical protein MQC_01722 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387716987|gb|EIK05022.1| hypothetical protein MQE_02589 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387717047|gb|EIK05073.1| hypothetical protein MQA_01557 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387723829|gb|EIK11540.1| hypothetical protein MQG_02595 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387725446|gb|EIK13060.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS5]
gi|387728589|gb|EIK16073.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS6]
gi|387733388|gb|EIK20572.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS8]
gi|387734873|gb|EIK22022.1| hypothetical protein MQM_02704 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387735068|gb|EIK22207.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS9]
gi|387742473|gb|EIK29288.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS10]
gi|387743010|gb|EIK29809.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387744154|gb|EIK30925.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus VRS11b]
gi|394329036|gb|EJE55163.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|421955596|gb|EKU07932.1| Cold-shock DEAD-box protein A [Staphylococcus aureus CN79]
gi|436430653|gb|ELP28012.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
aureus subsp. aureus DSM 20231]
gi|436506489|gb|ELP42284.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21282]
gi|443405200|gb|ELS63809.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21236]
gi|443405702|gb|ELS64297.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21196]
gi|445547050|gb|ELY15324.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus
KT/314250]
gi|445563511|gb|ELY19670.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus KT/Y21]
Length = 506
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 133/246 (54%), Gaps = 53/246 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQQ 195
Query: 410 FRKKLK 415
F K K
Sbjct: 196 FMKSPK 201
>gi|27468597|ref|NP_765234.1| ATP-dependent RNA helicase [Staphylococcus epidermidis ATCC 12228]
gi|418607526|ref|ZP_13170756.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU057]
gi|81843521|sp|Q8CRP6.1|Y1679_STAES RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SE_1679
gi|27316144|gb|AAO05278.1|AE016749_224 ATP-dependent RNA helicase [Staphylococcus epidermidis ATCC 12228]
gi|374404380|gb|EHQ75354.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU057]
Length = 509
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 135/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q ++LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKVLKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|49484306|ref|YP_041530.1| helicase [Staphylococcus aureus subsp. aureus MRSA252]
gi|282904748|ref|ZP_06312622.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus C160]
gi|282906426|ref|ZP_06314277.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282920258|ref|ZP_06327982.1| ATP-dependent RNA helicase DeaD [Staphylococcus aureus subsp.
aureus C427]
gi|283958860|ref|ZP_06376305.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus A017934/97]
gi|295428668|ref|ZP_06821294.1| ATP-dependent RNA helicase DeaD [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|415684901|ref|ZP_11449930.1| putative helicase [Staphylococcus aureus subsp. aureus CGS00]
gi|417887143|ref|ZP_12531279.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21195]
gi|418565159|ref|ZP_13129574.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21264]
gi|418582899|ref|ZP_13146972.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1605]
gi|418600951|ref|ZP_13164400.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21345]
gi|418892594|ref|ZP_13446705.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1176]
gi|418898667|ref|ZP_13452734.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC341D]
gi|418901468|ref|ZP_13455519.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1214]
gi|418909906|ref|ZP_13463896.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG149]
gi|418918125|ref|ZP_13472079.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1267]
gi|418923794|ref|ZP_13477706.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1233]
gi|418983027|ref|ZP_13530731.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1242]
gi|418986647|ref|ZP_13534328.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1500]
gi|81650664|sp|Q6GEZ3.1|Y2168_STAAR RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SAR2168
gi|49242435|emb|CAG41149.1| putative helicase [Staphylococcus aureus subsp. aureus MRSA252]
gi|282316118|gb|EFB46499.1| ATP-dependent RNA helicase DeaD [Staphylococcus aureus subsp.
aureus C427]
gi|282330376|gb|EFB59894.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282594781|gb|EFB99758.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus C160]
gi|283789578|gb|EFC28401.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus A017934/97]
gi|295127338|gb|EFG56978.1| ATP-dependent RNA helicase DeaD [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|315193240|gb|EFU23638.1| putative helicase [Staphylococcus aureus subsp. aureus CGS00]
gi|341858415|gb|EGS99208.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21195]
gi|371974783|gb|EHO92099.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21264]
gi|374400368|gb|EHQ71483.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21345]
gi|377700704|gb|EHT25038.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1214]
gi|377702654|gb|EHT26974.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1242]
gi|377702762|gb|EHT27081.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1500]
gi|377709133|gb|EHT33404.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1605]
gi|377729734|gb|EHT53820.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1176]
gi|377732973|gb|EHT57022.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1233]
gi|377748968|gb|EHT72922.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG1267]
gi|377749869|gb|EHT73808.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIG149]
gi|377758226|gb|EHT82112.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC341D]
Length = 506
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 133/246 (54%), Gaps = 53/246 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQQ 195
Query: 410 FRKKLK 415
F K K
Sbjct: 196 FMKSPK 201
>gi|223982748|ref|ZP_03632977.1| hypothetical protein HOLDEFILI_00251 [Holdemania filiformis DSM
12042]
gi|223965288|gb|EEF69571.1| hypothetical protein HOLDEFILI_00251 [Holdemania filiformis DSM
12042]
Length = 424
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 133/230 (57%), Gaps = 44/230 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NEL +HP ++K+ R+G+ PT IQ+ IP +G+D++G A+TG+GKT AF LPI+
Sbjct: 3 FNELPIHPSILKNCQRMGYTTPTKIQQKAIPPVL-EGRDLLGLAQTGTGKTAAFALPILD 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L+++ +KG+ A ++AL++TPTRELA+Q+ D+ + +G+ ++ V
Sbjct: 62 QLMKQ--------PQKGKRA--------IKALVLTPTRELAIQIVDNFQLYGQGLPLKTV 105
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ Q LK ++++ TPGRL +L+ + L++L + FVLDEADRM++
Sbjct: 106 VIFGGVKQGAQVDQLKKGADILIATPGRLLDLVG---QRLLDLSQVEIFVLDEADRMLDM 162
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ VS+L K+QTL+FSAT+
Sbjct: 163 GFIHDVKR------------------------VSALLVNKKQTLLFSATM 188
>gi|187479233|ref|YP_787258.1| ATP-dependent RNA helicase [Bordetella avium 197N]
gi|115423820|emb|CAJ50371.1| putative ATP-dependent RNA helicase [Bordetella avium 197N]
Length = 477
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 129/243 (53%), Gaps = 42/243 (17%)
Query: 164 SEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSG 223
S A S E + + LHPLL+KSI G+ PTPIQ IP A +G+D++GAA+TG+G
Sbjct: 6 SSAAPSAEALTFADFGLHPLLLKSIAETGYTSPTPIQAQAIPVVA-EGRDVMGAAQTGTG 64
Query: 224 KTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHL 282
KT AF LPI+ RL+ + +P H +RALI+TPTRELA QV +++
Sbjct: 65 KTAAFTLPILHRLMPLANSSA-------------SPARHPVRALILTPTRELADQVYENV 111
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 342
K + +R + GG+ Q+ L+ E++V TPGRL + + E+ V L +
Sbjct: 112 KRYSLHTPLRSAVVFGGVDIGPQKEALRQGCEVLVATPGRLLDHV---EQKNVNLSQVGI 168
Query: 343 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 402
VLDEADRM++ G +L+ II +LP +RQ L+FSA
Sbjct: 169 LVLDEADRMLDMGFLPDLERIIRLLP------------------------PQRQGLLFSA 204
Query: 403 TIA 405
T +
Sbjct: 205 TFS 207
>gi|237742838|ref|ZP_04573319.1| ATP-dependent RNA helicase [Fusobacterium sp. 4_1_13]
gi|229430486|gb|EEO40698.1| ATP-dependent RNA helicase [Fusobacterium sp. 4_1_13]
Length = 528
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFVEDIEKI---LTFTN 179
>gi|442314863|ref|YP_007356166.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-2]
gi|441483786|gb|AGC40472.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-2]
Length = 376
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 130/233 (55%), Gaps = 45/233 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
F + +L L ++K+I G+ PT IQ+ IP +G+D+IG A+TG+GKT AF +P
Sbjct: 5 FMNFTQLSLSSPILKAISDAGYTTPTAIQEKAIPTIL-EGRDLIGCAQTGTGKTAAFSIP 63
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
++Q +L E K GK +RALI+TPTRELA+Q+ +++++ +K +N+
Sbjct: 64 LLQ-ILSETPKKGK----------------SVRALILTPTRELAIQIQENIEQYSKFLNI 106
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ + I GG+ KQER L ++++ TPGRL +LM G L+ L + VLDEADRM
Sbjct: 107 KHLSIFGGVPQGKQERALNQGVDILIATPGRLLDLMQQG---LLSLSQIEILVLDEADRM 163
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++ G +++ I+ +P KKRQTL FSAT+
Sbjct: 164 LDMGFVNDVKKILTKVP------------------------KKRQTLFFSATM 192
>gi|409051554|gb|EKM61030.1| hypothetical protein PHACADRAFT_24252 [Phanerochaete carnosa
HHB-10118-sp]
Length = 793
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 199/449 (44%), Gaps = 101/449 (22%)
Query: 1 MAVGSPTLTYEHSKETKPNRRKRTRKSREAEKLNSLKWNSSFSAADNDPFAFLVGSNELD 60
MA +T + ET P+ +T+ E +LN L + S DP+ NE
Sbjct: 1 MAADDFVMTIDSDDETGPSELSKTKDIAEEAQLN-LDFVFDLSG---DPY------NE-- 48
Query: 61 GGFLSLEEIDEASYNLQIPKPEKGKPGKKTN----------TKKRKRSSANEEDP---GD 107
FLS E++ I K K +P + T KRKR S +E D G
Sbjct: 49 --FLS-----ESNIQDYIKKGTKSEPISVDDIIERRRQHRFTGKRKRDSDDEGDESEEGP 101
Query: 108 GDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTV-EESVTVSNGPDDAEEELVSEA 166
D D +G G E + +++++++ + T EE + G D+ EE S+
Sbjct: 102 ADNDSEGEGEDDEGSEGEMMGLEGEEEEEEEKDPLATSDEEDMKGKGGSDEENEEPASDK 161
Query: 167 EISTE--------------------------FDAWNELRLHPLLMKSIYRLGFKEPTPIQ 200
E S E ++ + L ++K+I L F +PTPIQ
Sbjct: 162 ESSDEDSEKETQAEKDRKTAFFASDAGPVEQHSSFMSMNLSRPVLKAIASLNFTKPTPIQ 221
Query: 201 KACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK 260
A IP A GKDI+G A TGSGKT AF +P+++RL M E+G++A
Sbjct: 222 AATIPVALL-GKDIVGNAVTGSGKTAAFMIPMIERL---------MYRERGKKA------ 265
Query: 261 GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTP 320
R +++ PTREL +Q + ++A ++R +VGG+S + QE L+ RP++++ TP
Sbjct: 266 AATRCMVLVPTRELGVQCYEVGTKLAAHTDIRFCLVVGGLSLKSQEVALRTRPDIIIATP 325
Query: 321 GRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQ 380
GRL + + L TL VLDEADRM+ G EL II P++
Sbjct: 326 GRLIDHIRN--TPTFTLDTLDILVLDEADRMLSEGFQDELAEIIKSCPVS---------- 373
Query: 381 TQTCVTVSSLQRKKRQTLVFSATIALSAD 409
RQT++FSAT+ S D
Sbjct: 374 --------------RQTMLFSATMTDSVD 388
>gi|309776780|ref|ZP_07671754.1| ATP-dependent RNA helicase RhlE [Erysipelotrichaceae bacterium
3_1_53]
gi|308915528|gb|EFP61294.1| ATP-dependent RNA helicase RhlE [Erysipelotrichaceae bacterium
3_1_53]
Length = 438
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 128/230 (55%), Gaps = 47/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ L + ++K+I G+ PTPIQ+ IP A QG+DI+G A+TG+GKT AF +P +Q
Sbjct: 3 FQTLNITEPILKAINEQGYLTPTPIQEQAIPYAL-QGRDILGCAQTGTGKTAAFSIPTIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
LL EK ++R+LI+TPTRELA+Q+ +++ AK +R
Sbjct: 62 -LLNRHEKR------------------YIRSLIVTPTRELAIQIQENICAYAKHTGIRSA 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + QER+LKA +++V TPGRL +L+ G +V++ + F+LDEADRM++
Sbjct: 103 VIFGGVPQKPQERILKAGVDILVATPGRLNDLIQQG---IVDIGRIEIFILDEADRMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ +I LP KK+QTL FSAT+
Sbjct: 160 GFLPDVKRLIAKLP------------------------KKKQTLFFSATM 185
>gi|73662111|ref|YP_300892.1| ATP-dependent RNA helicase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123643052|sp|Q49Z29.1|Y802_STAS1 RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SSP0802
gi|72494626|dbj|BAE17947.1| putative ATP-dependent RNA helicase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 506
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 131/225 (58%), Gaps = 35/225 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + + +++ +GF E TPIQK IP A +GKD++G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKMAETLQSMGFNEATPIQKESIPLAL-EGKDVLGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK A + +++LI+ PTRELA+QV + LK AKG N++VV
Sbjct: 62 --------------------EKVADQEGVQSLILAPTRELAMQVAESLKAFAKGQNIQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM ++Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIDRQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 399
G +++ I+D +P +EQ QT + S+ K QTLV
Sbjct: 159 GFIDDMKFIMDKIP---------AEQRQTML-FSATMPKAIQTLV 193
>gi|321458546|gb|EFX69612.1| hypothetical protein DAPPUDRAFT_300875 [Daphnia pulex]
Length = 621
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 115/189 (60%), Gaps = 21/189 (11%)
Query: 263 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 322
LRALIITPTRELA+Q+ HLK VAK ++ + ++GGM+ KQER+L P++V+GTPGR
Sbjct: 195 LRALIITPTRELAVQIEKHLKAVAKYTDISICLVIGGMAAPKQERILSKGPDIVIGTPGR 254
Query: 323 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 382
LWE++ GG HL ++ + + LDE DR++E GHF E++++++ + N E
Sbjct: 255 LWEMIEGGNSHLSQIKDIRYLALDETDRLLEKGHFAEVRTLLEHI---NKDEE------- 304
Query: 383 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 442
+++ RQ VFSAT+ L+ D +L G+LK K+ + ++ L G+R
Sbjct: 305 --------KKRWRQNFVFSATLTLAHDLPNRL--GNLKSKKKKEAMK-LDKLLSLVGVRP 353
Query: 443 NVAIVDLTN 451
+VDLT
Sbjct: 354 KAKVVDLTT 362
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 58/83 (69%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
EI+ + W + L ++++++ LGF+ PT IQ AC+P A KDI+GAAETGSGKTL
Sbjct: 33 EITPDMIIWKAMYLPDPIVRAVWELGFQTPTAIQLACLPTAMKGRKDIVGAAETGSGKTL 92
Query: 227 AFGLPIMQRLLEEREKAGKMLEE 249
AFG+PI+ +L+++E K L++
Sbjct: 93 AFGIPILNGILKDKEFELKKLKQ 115
>gi|290987818|ref|XP_002676619.1| predicted protein [Naegleria gruberi]
gi|284090222|gb|EFC43875.1| predicted protein [Naegleria gruberi]
Length = 493
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 154/302 (50%), Gaps = 44/302 (14%)
Query: 109 DGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPD-----DAEEELV 163
D D N + +KN + KK +K K + E+SV D + + +V
Sbjct: 18 DDTTDKNSIISSSHSTVKNNQKKKIRKDKIEDERNWTEKSVNEMTDRDWRIFREDFDIVV 77
Query: 164 SEAEISTEFDAWNELRLHPL-LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
+ +W+E L PL ++ +I L FKEPT +QK CIP A + G D++G AETGS
Sbjct: 78 KGGRVPPPLRSWDETTLLPLEIINAITDLKFKEPTAVQKQCIPIAMN-GIDLVGLAETGS 136
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 282
GKT ++ +P+ ++ + L +E K P G LI+ PTRELA Q+
Sbjct: 137 GKTASYIIPMCCQIAK--------LPRMNDEIAKDGPYG----LILVPTRELAEQIEREA 184
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 342
+ A+ RV I+GG+S EKQ RL++ E++V TPGRL + ++ +V L+ F
Sbjct: 185 TKYARQFEFRVQAIIGGVSIEKQSRLIRGGCEILVATPGRLIDCLNNS---IVVLNQCHF 241
Query: 343 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 402
VLDEAD+MIE +++ +I++ +P + +Q RQT++FSA
Sbjct: 242 IVLDEADKMIEMNFEKDVNTILENMP-------------------THIQ---RQTMLFSA 279
Query: 403 TI 404
T+
Sbjct: 280 TM 281
>gi|257426220|ref|ZP_05602635.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428878|ref|ZP_05605272.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257431487|ref|ZP_05607860.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257434197|ref|ZP_05610547.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus E1410]
gi|257437110|ref|ZP_05613150.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus M876]
gi|282914927|ref|ZP_06322707.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus M899]
gi|282925469|ref|ZP_06333123.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus C101]
gi|293508999|ref|ZP_06667786.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510911|ref|ZP_06669610.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus M809]
gi|293547513|ref|ZP_06672188.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus M1015]
gi|257270925|gb|EEV03098.1| DEAD-box ATP dependent DNA helicase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257274220|gb|EEV05737.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257277728|gb|EEV08398.1| DEAD-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257280836|gb|EEV10981.1| DEAD/DEAH box helicase domain-containing protein [Staphylococcus
aureus subsp. aureus E1410]
gi|257283503|gb|EEV13630.1| ATP-dependent RNA helicase DEAD box family protein [Staphylococcus
aureus subsp. aureus M876]
gi|282312870|gb|EFB43271.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus C101]
gi|282321130|gb|EFB51461.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus M899]
gi|290919633|gb|EFD96706.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
aureus subsp. aureus M1015]
gi|291094703|gb|EFE24975.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466196|gb|EFF08723.1| dead-box ATP-dependent RNA helicase [Staphylococcus aureus subsp.
aureus M809]
Length = 506
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 130/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++L K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 63 KVL---------------------GKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATM 185
>gi|254302223|ref|ZP_04969581.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|422340165|ref|ZP_16421119.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|148322415|gb|EDK87665.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|355370105|gb|EHG17493.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 529
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFVEDIEKI---LTFTN 179
>gi|321466431|gb|EFX77426.1| hypothetical protein DAPPUDRAFT_213372 [Daphnia pulex]
Length = 478
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 117/232 (50%), Gaps = 47/232 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+N L++ L+K I LG +PTP+Q CIPA G+D IG TGSGKT AF LPI+
Sbjct: 10 TFNSLKIDEWLIKQIKNLGVDKPTPVQINCIPAIL-DGRDCIGCDRTGSGKTFAFALPIV 68
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q L ++ P G + AL++TPTRELA Q+ D + + K IN+R+
Sbjct: 69 QTLSKD-------------------PYG-IYALVLTPTRELAYQIADQFQIIGKPINLRM 108
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
IVGGM Q L P +V+ TPGRL + + + T+ + V+DEADR++E
Sbjct: 109 SVIVGGMGMMDQGIELSNHPHIVIATPGRLADHLESCKTF--SFKTIKYLVMDEADRLLE 166
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
+LQ I LP +KRQTL+FSATI
Sbjct: 167 GNFDEQLQIIFQALP------------------------EKRQTLLFSATIT 194
>gi|66812836|ref|XP_640597.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
gi|74897154|sp|Q54TJ4.1|DDX27_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx27; AltName:
Full=DEAD box protein 27
gi|60468614|gb|EAL66617.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
Length = 783
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 128/237 (54%), Gaps = 44/237 (18%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
+ E + EL L L+K++ +LGF +PTPIQ IP A + GKDI+ +A TGSGKT A
Sbjct: 185 VEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALN-GKDILASASTGSGKTAA 243
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F LP+++RLL ++E A +R LI+ PTRELALQ ++ +A+
Sbjct: 244 FLLPVLERLL-------------FRDSEYRA----IRVLILLPTRELALQCQSVMENLAQ 286
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
N+ IVGG+S + QE L+ P++V+ TPGRL + + H + L L +LDE
Sbjct: 287 FSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNA--HGIGLDDLEILILDE 344
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADR+++ G E+ I++ P TN RQT++FSAT+
Sbjct: 345 ADRLLDMGFKDEINKIVESCP-TN-----------------------RQTMLFSATL 377
>gi|452845761|gb|EME47694.1| hypothetical protein DOTSEDRAFT_77927 [Dothistroma septosporum
NZE10]
Length = 1056
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 151/301 (50%), Gaps = 66/301 (21%)
Query: 146 EESVTVSNGPDDAEEELVSEAEIST--------EFDAWNELRLHPLLMKSIYRLGFKEPT 197
EE V+ S DDA E + A + A++ + L ++K + +GF +PT
Sbjct: 496 EEPVSASEAGDDAAEREKANAFFADGESKKTGPTATAFHSMNLSRPILKGLASVGFDKPT 555
Query: 198 PIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKY 257
PIQ +P A +GKD++G A TGSGKT AF +PI++RLL Y
Sbjct: 556 PIQMKAVPVAL-EGKDLVGGAVTGSGKTAAFLIPILERLL-------------------Y 595
Query: 258 APK--GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 315
PK R I+ PTRELALQ + K+++ ++ V VGG+S ++Q++ LK RP++
Sbjct: 596 RPKRTSMTRVAILMPTRELALQCFNVAKKLSAFTDISVAMAVGGLSIKEQDKELKMRPDI 655
Query: 316 VVGTPGRLWELMSGGEKHL--VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 373
V+ TPGR +L E++ +++ T+ VLDEADRM+E G EL I+ +P
Sbjct: 656 VIATPGRFIDL----ERNYRSLDVGTIEILVLDEADRMLEEGFADELNEILSKIP----- 706
Query: 374 NEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD------FRKKLKHGSLKLKQSVNG 427
K RQT++FSAT+ D ++ ++ KQ+V+G
Sbjct: 707 -------------------KSRQTMLFSATMTTKVDDLVRSGLQRPVRLMVDAQKQTVSG 747
Query: 428 L 428
L
Sbjct: 748 L 748
>gi|358331630|dbj|GAA50408.1| probable ATP-dependent RNA helicase DDX23, partial [Clonorchis
sinensis]
Length = 903
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 142/238 (59%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W E+ P L + I ++G+ +PTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 113 IPNPLRSWAEMDASPELKEVIKKVGYADPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 171
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ E+ P A+I+ PTRELA Q+ + + +
Sbjct: 172 FLIPLLNWI----QSLPKL--ERMEDTEQ-GPY----AIIMAPTRELAQQIEEETVKFGR 220
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ ++ V ++GG+S E+Q L+ E+V+GTPGRL +++ E + L+ ++ VLDE
Sbjct: 221 ALGIKTVSLIGGLSREEQALKLRMGAEIVIGTPGRLNDVL---ENRYIVLNQCTYVVLDE 277
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
AD+MI+ G E+ +I+ LP+TN + + +E ++ + + K RQT++F+AT+
Sbjct: 278 ADKMIDMGFEPEVNNILSYLPVTNEKPDTEDAEDDSKLLSNFATKHKYRQTVMFTATM 335
>gi|302499800|ref|XP_003011895.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
gi|291175449|gb|EFE31255.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
Length = 814
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 142/307 (46%), Gaps = 72/307 (23%)
Query: 105 PGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVS 164
P D DEDG+G + E + ++ Q + EE VT S A
Sbjct: 253 PDDLASDEDGSGSESEDDDEIRKQN-----------EFFAPEEQVTESKSTSGAPA---- 297
Query: 165 EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGK 224
++ L L +++ + +GF PTPIQ+ IP A GKD++G A TGSGK
Sbjct: 298 ---------SFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALL-GKDVVGGAVTGSGK 347
Query: 225 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHL 282
T AF +PI++RLL Y P+ R I+ PTRELA+Q +
Sbjct: 348 TGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNVA 388
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 342
++A ++ +VGG S +QE +LK RP++++ TPGR + M V+ TL
Sbjct: 389 TKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEI 446
Query: 343 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 402
VLDEADRM+E+G EL I+ +P K RQT++FSA
Sbjct: 447 LVLDEADRMLEDGFAEELNEILTTIP------------------------KSRQTMLFSA 482
Query: 403 TIALSAD 409
T+ S D
Sbjct: 483 TMTNSVD 489
>gi|340753231|ref|ZP_08690020.1| ATP-dependent RNA helicase [Fusobacterium sp. 2_1_31]
gi|422315292|ref|ZP_16396730.1| hypothetical protein FPOG_02366 [Fusobacterium periodonticum D10]
gi|229422830|gb|EEO37877.1| ATP-dependent RNA helicase [Fusobacterium sp. 2_1_31]
gi|404592614|gb|EKA94414.1| hypothetical protein FPOG_02366 [Fusobacterium periodonticum D10]
Length = 529
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 120/197 (60%), Gaps = 26/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K + + G++ PTPIQK IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQKLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E E ++ H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------ENFETSDH-----HIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 109
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +FVLDEAD M+
Sbjct: 110 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFVLDEADEMLNM 166
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 167 GFIEDIEKI---LTFTN 180
>gi|242371572|ref|ZP_04817146.1| ATP-dependent RNA helicase [Staphylococcus epidermidis M23864:W1]
gi|242350724|gb|EES42325.1| ATP-dependent RNA helicase [Staphylococcus epidermidis M23864:W1]
Length = 525
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 133/230 (57%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 20 FKELGISDKTVQTLESMGFKEPTPIQKDSIPYAL-KGDDILGQAQTGTGKTGAFGIPLIE 78
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G+E +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 79 KVV-------------GQEG--------VQSLILAPTRELAMQVAEQLREFSKGQRVQVV 117
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM ++Q + LK P++VVGTPGR+ + ++ + ++ H + +LDEAD M+
Sbjct: 118 TVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLN---RRTLKTHDIHTLILDEADEMMNM 174
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +RQT++FSAT+
Sbjct: 175 GFIDDMRFIMDKIPA-----------------------DQRQTMLFSATM 201
>gi|261408394|ref|YP_003244635.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|329929405|ref|ZP_08283153.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus sp. HGF5]
gi|261284857|gb|ACX66828.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. Y412MC10]
gi|328936492|gb|EGG32937.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus sp. HGF5]
Length = 533
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 140/250 (56%), Gaps = 53/250 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + L P ++++I LGF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP++
Sbjct: 4 FADFGLEPRVLQAITELGFEEATPIQSQSIPIAL-TGKDMIGQAQTGTGKTAAFGLPLIH 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +E E+ + ALI+TPTRELA+QV + + ++++ +R +
Sbjct: 63 KIAKEEER--------------------IVALIMTPTRELAIQVAEEIGKLSRFKGIRSL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG +Q R LK +P++++GTPGRL + ++ + + L + VLDEAD M++
Sbjct: 103 AIYGGQDIGRQIRALKRKPQIIIGTPGRLLDHIN---RKTIRLDDVQTVVLDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++QSI+ ++P ++RQTL+FSAT+ L++
Sbjct: 160 GFMEDIQSILKLVP------------------------EERQTLLFSATMPANIQKLASQ 195
Query: 410 FRKKLKHGSL 419
F K+ +H S+
Sbjct: 196 FLKEPEHVSV 205
>gi|300120104|emb|CBK19658.2| unnamed protein product [Blastocystis hominis]
Length = 620
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 141/241 (58%), Gaps = 27/241 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+E +HP ++++I LGFKEPTPIQ+ IP +G D+IG A+TGSGKT AF +P++Q
Sbjct: 181 WSEAAVHPAILRAIETLGFKEPTPIQRQAIPIEL-KGMDMIGIAKTGSGKTCAFVVPMLQ 239
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----- 289
+++ +E + + E +G L A+++ PTRELA Q+ D +++A+
Sbjct: 240 YVIQ------APIETRLQSKE----QGPL-AVVMAPTRELAKQIRDDAEKLAQFCVDERL 288
Query: 290 ------NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 343
+R+ +VGG S +Q L ++++GTPGRL + + E+H V L+ ++
Sbjct: 289 AQSRSPRIRIACMVGGESIVEQSSFLSNGCDILIGTPGRLLDCL---ERHFVVLNQTNYI 345
Query: 344 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 403
VLDEADRMI+ G + +++D + T S E + + + V+SL R T++FSAT
Sbjct: 346 VLDEADRMIDEGFEESVNAVMDAMGSTLKSEE-EEDIEKAAEGVASLTNMYRTTIMFSAT 404
Query: 404 I 404
+
Sbjct: 405 M 405
>gi|425738293|ref|ZP_18856558.1| hypothetical protein C273_07847 [Staphylococcus massiliensis S46]
gi|425479966|gb|EKU47136.1| hypothetical protein C273_07847 [Staphylococcus massiliensis S46]
Length = 495
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 124/214 (57%), Gaps = 48/214 (22%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEK 250
+GFKEPTPIQ IP A +G DI+G A+TG+GKT AFG+P+++++++
Sbjct: 20 MGFKEPTPIQNDSIPYAL-EGVDILGQAQTGTGKTGAFGIPLIEKVVD------------ 66
Query: 251 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLK 310
K ++ALI+ PTRELA+QV + ++E +KG NV+V + GGM ++Q + LK
Sbjct: 67 ---------KEGIQALILAPTRELAMQVAEQIREFSKGQNVQVATVFGGMPIDRQIKTLK 117
Query: 311 ARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 370
RP++VVGTPGR+ + + ++HTL +LDEAD M+ G +++ I+ LP
Sbjct: 118 RRPKIVVGTPGRVIDHLDRRTLKTNDIHTL---ILDEADEMMNMGFIDDMRYIMSKLP-- 172
Query: 371 NGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+++RQT++FSAT+
Sbjct: 173 ---------------------KEQRQTMLFSATM 185
>gi|421526210|ref|ZP_15972819.1| ATP-dependent RNA helicase [Fusobacterium nucleatum ChDC F128]
gi|402257969|gb|EJU08442.1| ATP-dependent RNA helicase [Fusobacterium nucleatum ChDC F128]
Length = 529
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 116/190 (61%), Gaps = 24/190 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSII 364
G +++ I+
Sbjct: 166 GFVEDIEKIL 175
>gi|336406430|ref|ZP_08587085.1| hypothetical protein HMPREF0127_04398 [Bacteroides sp. 1_1_30]
gi|345509853|ref|ZP_08789440.1| hypothetical protein BSAG_03518 [Bacteroides sp. D1]
gi|335934634|gb|EGM96619.1| hypothetical protein HMPREF0127_04398 [Bacteroides sp. 1_1_30]
gi|345454658|gb|EEO51805.2| hypothetical protein BSAG_03518 [Bacteroides sp. D1]
Length = 382
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 137/242 (56%), Gaps = 45/242 (18%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
+S A+I+ F + EL + ++K+I G+ PTPIQ+ IP A + +DI+G A+TG+
Sbjct: 1 MSTAKIT--FMTFKELNITEPILKAIGEKGYTVPTPIQEKAIPPALAK-RDILGCAQTGT 57
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 282
GKT +F +PI+Q L ++E A +G ++ALI+TPTRELALQ+++ +
Sbjct: 58 GKTASFAIPIIQHLQLDKEAA----RRQG-----------IKALILTPTRELALQISECI 102
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 342
+ +K +R I GG++ Q LL+ +++V TPGRL +LMS G H L T+ +
Sbjct: 103 DDYSKHTRIRHGVIFGGVNQRPQVDLLRKGIDILVATPGRLLDLMSQGHIH---LDTIQY 159
Query: 343 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 402
FVLDEADRM++ G +++ I+ LP K++QTL FSA
Sbjct: 160 FVLDEADRMLDMGFIHDIKRILPKLP------------------------KEKQTLFFSA 195
Query: 403 TI 404
T+
Sbjct: 196 TM 197
>gi|320355280|ref|YP_004196619.1| DEAD/DEAH box helicase [Desulfobulbus propionicus DSM 2032]
gi|320123782|gb|ADW19328.1| DEAD/DEAH box helicase domain protein [Desulfobulbus propionicus
DSM 2032]
Length = 552
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 139/249 (55%), Gaps = 53/249 (21%)
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEE 239
LHP L++++ LGF +PTPIQ+A IP +G+D+IG A+TG+GKT AFGLP++QR+
Sbjct: 11 LHPDLVQTVTELGFTDPTPIQQAAIPLLL-EGRDLIGQAQTGTGKTAAFGLPLLQRITPR 69
Query: 240 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGG 299
++ ++AL++ PTRELA+QV + ++ + + V+ + GG
Sbjct: 70 QQG--------------------VQALVLAPTRELAIQVAEAIQRYGQQRGITVLAVYGG 109
Query: 300 MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 359
+ ++Q R L+ E++VGTPGRL +LM+ G ++L T+ VLDEAD M+ G +
Sbjct: 110 QAYQQQIRSLRQGVEVIVGTPGRLLDLMNQGT---LDLTTVRTVVLDEADEMLSMGFVED 166
Query: 360 LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSADFRKKL 414
++ I+D +P +RQT++FSATI+ LSA + +
Sbjct: 167 IELILDRIP------------------------AERQTMLFSATISKRVLGLSARYLRDP 202
Query: 415 KHGSLKLKQ 423
+ S+ KQ
Sbjct: 203 ETVSITPKQ 211
>gi|82751683|ref|YP_417424.1| ATP-dependent RNA helicase [Staphylococcus aureus RF122]
gi|123548216|sp|Q2YUH3.1|Y1965_STAAB RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SAB1965c
gi|82657214|emb|CAI81654.1| ATP-dependent RNA helicase [Staphylococcus aureus RF122]
Length = 506
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 133/246 (54%), Gaps = 53/246 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+VV
Sbjct: 62 --------------------EKVVWKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQQ 195
Query: 410 FRKKLK 415
F K K
Sbjct: 196 FMKSPK 201
>gi|407452329|ref|YP_006724054.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-1]
gi|403313313|gb|AFR36154.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-1]
Length = 371
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 129/230 (56%), Gaps = 45/230 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L ++K+I G+ PT IQ+ IP +G+D+IG A+TG+GKT AF +P++Q
Sbjct: 3 FTQLSLSSPILKAISDAGYTTPTAIQEKAIPTIL-EGRDLIGCAQTGTGKTAAFSIPLLQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L E K GK +RALI+TPTRELA+Q+ +++++ +K +N++ +
Sbjct: 62 -ILSETPKKGK----------------SIRALILTPTRELAIQIQENIEQYSKFLNIKHL 104
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ KQER L ++++ TPGRL +LM G L+ L + VLDEADRM++
Sbjct: 105 SIFGGVPQGKQERALNQGVDILIATPGRLLDLMQQG---LLSLSQIEILVLDEADRMLDM 161
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+ +P KKRQTL FSAT+
Sbjct: 162 GFVNDVKKILTKVP------------------------KKRQTLFFSATM 187
>gi|258563228|ref|XP_002582359.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
gi|237907866|gb|EEP82267.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
Length = 836
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 127/254 (50%), Gaps = 48/254 (18%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
A EE ++ E S+ + L +++ + +GF PTPIQ+ IP GKD++G
Sbjct: 297 APEENTTDPEGSSSSSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPVGL-LGKDLVGG 355
Query: 218 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELA 275
A TGSGKT AF +PI++RLL Y P+ R +I+ PTRELA
Sbjct: 356 AVTGSGKTAAFIIPILERLL-------------------YRPRKVPTSRVVILMPTRELA 396
Query: 276 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 335
+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M V
Sbjct: 397 VQCYNVATKLATYTDITFCQLVGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFTV 456
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
+ TL VLDEADRM+E+G EL I+ +P K R
Sbjct: 457 D--TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSR 490
Query: 396 QTLVFSATIALSAD 409
QT++FSAT+ S D
Sbjct: 491 QTMLFSATMTDSVD 504
>gi|395763810|ref|ZP_10444479.1| ATP-dependent RNA helicase [Janthinobacterium lividum PAMC 25724]
Length = 515
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 130/242 (53%), Gaps = 47/242 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + L P + +++ G+ PTPIQ+ IP QG+D++GAA+TG+GKT F LPI+Q
Sbjct: 39 FADFGLAPEIQRALTDQGYTHPTPIQEQAIPVVL-QGRDVMGAAQTGTGKTAGFSLPIIQ 97
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
L+ + +P H +RALI+TPTRELA+QV +++K AK +R
Sbjct: 98 LLM-------------AHASSSMSPARHPVRALILTPTRELAVQVAENVKAYAKHTPLRS 144
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GGM + Q LL+ E+V+ TPGRL + + E+ + L + V+DEADRM++
Sbjct: 145 TVVFGGMDMKPQTVLLRGGVEIVIATPGRLLDHI---EQKNISLSQVQMLVMDEADRMLD 201
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 408
G +LQ II++LP K+RQ L+FSAT + L+A
Sbjct: 202 MGFLPDLQRIINLLP------------------------KQRQNLMFSATFSPEIKKLAA 237
Query: 409 DF 410
F
Sbjct: 238 TF 239
>gi|241663607|ref|YP_002981967.1| DEAD/DEAH box helicase [Ralstonia pickettii 12D]
gi|240865634|gb|ACS63295.1| DEAD/DEAH box helicase domain protein [Ralstonia pickettii 12D]
Length = 493
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 135/258 (52%), Gaps = 48/258 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
S FD++ LHP +++++ G+ +PTPIQ A IP G+D++GAA+TG+GKT F
Sbjct: 12 SVTFDSFG---LHPDVLRALTESGYTKPTPIQAAAIPVVT-AGRDVMGAAQTGTGKTAGF 67
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAK 287
LPI+ LL + + +P H +RALI+TPTRELA QV D++ + AK
Sbjct: 68 SLPIIHNLLPDANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYAK 114
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+R + GG+ Q L+ E++V TPGRL + + ++ V L + VLDE
Sbjct: 115 YTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLDE 171
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 172 ADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSPE 207
Query: 408 ADFRKKLKHGSLKLKQSV 425
KKL L+ Q++
Sbjct: 208 I---KKLAASYLRHPQTI 222
>gi|409195488|ref|ZP_11224151.1| DEAD/DEAH box helicase-like protein [Marinilabilia salmonicolor JCM
21150]
Length = 427
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 37/231 (16%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L +++S+ G+ +PTPIQ+ IP GKD++G A+TG+GKT AF +PI+Q
Sbjct: 3 FKDLELIEPILRSLKEKGYTQPTPIQEQSIPILLG-GKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ L + + K L+ALI+TPTRELA+Q+ + L + K +R +
Sbjct: 62 NI---------YLNSSADNQSRRRRKPRLKALIVTPTRELAIQIGESLTDYGKYTGIRNI 112
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ Q + L+ +++V TPGRL +L+S G + L + +FVLDEADRM++
Sbjct: 113 VIFGGVKQGAQTQSLQRGTDILVATPGRLLDLISQG---FISLREIEYFVLDEADRMLDM 169
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +++ II++LP KRQ+L FSAT+A
Sbjct: 170 GFIHDVRKIINLLP------------------------AKRQSLFFSATMA 196
>gi|350272013|ref|YP_004883321.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
gi|348596855|dbj|BAL00816.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
Length = 435
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 126/230 (54%), Gaps = 47/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K++ R G+ PTPIQ+ IP Q +D+IG A+TG+GKT AF LPI+Q
Sbjct: 3 FKELNLTAPILKAVDRQGYTTPTPIQQKAIPILL-QKRDLIGCAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L ER K ++ALI+TPTRELA+Q+ ++ + + +R
Sbjct: 62 NLASERRKG-------------------IKALILTPTRELAIQIQENFEHYGTHLPLRCT 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S Q L+ ++++ TPGRL +L++ G V++ + FVLDEADRM++
Sbjct: 103 VIFGGVSQVPQVERLRRGVDILIATPGRLCDLINQG---YVDISQIEVFVLDEADRMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G R+++ +++ LP KKRQTL+FSAT+
Sbjct: 160 GFIRDVKKVLNALP------------------------KKRQTLLFSATM 185
>gi|365984639|ref|XP_003669152.1| hypothetical protein NDAI_0C02490 [Naumovozyma dairenensis CBS 421]
gi|343767920|emb|CCD23909.1| hypothetical protein NDAI_0C02490 [Naumovozyma dairenensis CBS 421]
Length = 771
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 125/232 (53%), Gaps = 45/232 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++N L L ++K + LG+ +P+PIQ A IP A GKDII A TGSGKT AF +PI+
Sbjct: 250 SFNTLSLSRPVLKGLANLGYNKPSPIQSATIPIALL-GKDIIAGAVTGSGKTAAFMIPII 308
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+RLL K A R +++TPTRELA+Q+ D K++ K +N
Sbjct: 309 ERLL-----------------FKPAKVSSTRVIVLTPTRELAIQIADVAKKIGKFVNGLT 351
Query: 294 VPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+ VGG++ +QE++LK RP++V+ TPGR + + V+ ++ V+DEADRM+
Sbjct: 352 FGLAVGGLNLRQQEQILKQRPDIVIATPGRFIDHVRNSASFNVD--SVEILVMDEADRML 409
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
E G EL I+ +LP KRQT++FSAT+
Sbjct: 410 EEGFQEELNEIMQLLPT------------------------KRQTMLFSATM 437
>gi|56418761|ref|YP_146079.1| ATP-dependent RNA helicase [Geobacillus kaustophilus HTA426]
gi|81675946|sp|Q5L3G9.1|CSHA_GEOKA RecName: Full=DEAD-box ATP-dependent RNA helicase CshA
gi|56378603|dbj|BAD74511.1| ATP-dependent RNA helicase [Geobacillus kaustophilus HTA426]
Length = 467
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 127/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L +MK+I R+GF+E TPIQ IP + Q KD+IG A+TG+GKT AFG+PI++
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSL-QNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ ++AL++ PTRELA+QV++ L ++ VRV+
Sbjct: 63 KV--------------------NVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG E+Q R LK P ++VGTPGR+ + ++ G L +HT+ VLDEAD M+
Sbjct: 103 PIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTV---VLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P +RQTL+FSAT+
Sbjct: 160 GFIEDIEAILSHVP------------------------AERQTLLFSATM 185
>gi|241766543|ref|ZP_04764404.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
gi|241363218|gb|EER58791.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
Length = 415
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 130/233 (55%), Gaps = 46/233 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++ L L P L+++ +GF PTP+Q A IPA +G D++G+A+TGSGKT AF LP++Q
Sbjct: 3 FSALGLSPALVQAATAMGFSAPTPVQSAAIPAVL-RGADVLGSAQTGSGKTAAFALPLLQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI--NVR 292
RL + + A + H+RALI+ PTRELA QV + ++ + +G+ V+
Sbjct: 62 RLQADAQNAPR----------------HVRALILVPTRELAAQVGEVIRSLGRGLPQPVK 105
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
V + GG+S Q L+ ++VV TPGRL +L+ E + + L ++ VLDEADR++
Sbjct: 106 VAVVFGGVSINPQMMGLRGGADVVVATPGRLLDLV---EHNALRLGSVEHLVLDEADRLL 162
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
+ G ELQ I+ +LP+ +RQ L+FSAT A
Sbjct: 163 DLGFAEELQRILQLLPV------------------------RRQNLLFSATFA 191
>gi|449275677|gb|EMC84446.1| putative ATP-dependent RNA helicase DDX23 [Columba livia]
Length = 795
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 382 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 440
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 441 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 489
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 490 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 546
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN ++E + + + S + K RQT++F+AT+
Sbjct: 547 ADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 605
>gi|332375408|gb|AEE62845.1| unknown [Dendroctonus ponderosae]
Length = 469
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 135/264 (51%), Gaps = 60/264 (22%)
Query: 141 KIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQ 200
++K EE+ PD EE V+ W++L L +L K+ +L +K P+ IQ
Sbjct: 20 EVKNTEET---EQTPDPIEEAPVT----------WSDLGLVDVLCKACEQLKWKTPSKIQ 66
Query: 201 KACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK 260
+ IP A QGKDIIG AETGSGKT AF LPI+Q LLE P+
Sbjct: 67 RESIPVAL-QGKDIIGLAETGSGKTAAFALPILQALLEN-------------------PQ 106
Query: 261 GHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTP 320
H ALI+TPTRELA Q+++ + + GI V+ + IVGG+ Q +L +P +++ TP
Sbjct: 107 RHF-ALILTPTRELAFQISEQFEALGSGIGVKSIVIVGGLDMTSQALMLAKKPHIIIATP 165
Query: 321 GRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQ 380
GRL + +S + L L F V+DEADR++ E+ I+ ++P
Sbjct: 166 GRLVDHLSNTKGF--NLRALKFLVMDEADRILNMDFEAEVDKILKVIP------------ 211
Query: 381 TQTCVTVSSLQRKKRQTLVFSATI 404
++R+T +FSAT+
Sbjct: 212 ------------RERRTFLFSATM 223
>gi|420186291|ref|ZP_14692362.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM040]
gi|394252508|gb|EJD97540.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM040]
Length = 509
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|358366223|dbj|GAA82844.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 1430
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 150/273 (54%), Gaps = 20/273 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E L LM+ I R+G+KEPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++
Sbjct: 993 SWEESNLPKRLMELISRVGYKEPTPIQRAAIPIAM-QNRDLIGVAVTGSGKTAAFLLPLL 1051
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ E + +E E G A+++ PTRELA Q+ K+ + V
Sbjct: 1052 CYIAEL---------PRIDEFEWRKADGPY-AIVLAPTRELAQQIEIEAKKFTGPLGFNV 1101
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI+
Sbjct: 1102 VSIVGGHSLEEQAYSLRDGAEIIIATPGRLVDCI---ERRMLVLSQCCYVIMDEADRMID 1158
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSATIALSAD-- 409
G + I+D LP++N + + + ++ ++ + RQT++++AT+ + +
Sbjct: 1159 LGFEEPVNKILDALPVSNEKPDSEDAENPLAMSRHINQDHHRYRQTMMYTATMPTAVERI 1218
Query: 410 FRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 442
RK L+ ++ S +++T+ +R M A
Sbjct: 1219 ARKYLRRPAIVTIGSAG--EAVDTVEQRVEMIA 1249
>gi|193214029|ref|YP_001995228.1| DEAD/DEAH box helicase [Chloroherpeton thalassium ATCC 35110]
gi|193087506|gb|ACF12781.1| DEAD/DEAH box helicase domain protein [Chloroherpeton thalassium
ATCC 35110]
Length = 431
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 128/231 (55%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + L+P +++++ LG++ PT IQ A IP A GKDI+ A+TG+GKT AF LPI+
Sbjct: 6 FESISLNPSILRALKELGYETPTAIQAAAIPEAI-LGKDILATAQTGTGKTAAFALPILH 64
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL E R + AP RALI+TPTRELALQ+ ++++ A+ + +R
Sbjct: 65 RLGENRSY------------DIRAP----RALILTPTRELALQIDNNIRLYARYLRLRTG 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I+GG+ Q ++L+ P+++V TPGRL +L G + L + FVLDEADRM++
Sbjct: 109 VIMGGVPAHPQIKMLRRNPDILVATPGRLIDLFDQG---FIGLDQIQTFVLDEADRMLDM 165
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +++ I SLQ + QTL+FSAT++
Sbjct: 166 GFIDDIRRI------------------------ESLQPRDHQTLLFSATLS 192
>gi|163750030|ref|ZP_02157274.1| ATP-dependent RNA helicase, DEAD box family protein [Shewanella
benthica KT99]
gi|161330304|gb|EDQ01285.1| ATP-dependent RNA helicase, DEAD box family protein [Shewanella
benthica KT99]
Length = 436
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 132/249 (53%), Gaps = 40/249 (16%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
+SE S ++ L L P L++ + LG+ +PTPIQ IPA G+DI+ A+TGS
Sbjct: 1 MSEHADSAANHGFSSLSLRPELLQVLTALGYSQPTPIQTQAIPAIL-AGQDIMAGAQTGS 59
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-------LRALIITPTRELA 275
GKT AF LPI+ +L E + L+EK ++ E AP +RAL++TPTRELA
Sbjct: 60 GKTAAFSLPILHKLTEPLLR----LDEKNQQ-ESEAPSCSQVPAIRAIRALVLTPTRELA 114
Query: 276 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 335
LQV + AK ++ + GG+S + Q ++L A +++V TPGRL + + G L
Sbjct: 115 LQVHGSFVKYAKLTQLKSALVYGGVSIDAQAQILAAGVDILVATPGRLLDHLRRGSMSLS 174
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
EL F V DEADRM++ G E+ +I+ LP K R
Sbjct: 175 ELE---FLVFDEADRMLDMGFKDEIDAIVKQLP------------------------KTR 207
Query: 396 QTLVFSATI 404
QTL+FSAT
Sbjct: 208 QTLLFSATF 216
>gi|327264401|ref|XP_003217002.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Anolis
carolinensis]
Length = 820
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P+TN ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAE-DPDKMMANFESGKHKYRQTVMFTATM 609
>gi|313205949|ref|YP_004045126.1| dead/deah box helicase domain-containing protein [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383485266|ref|YP_005394178.1| dead/deah box helicase domain protein [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|386322068|ref|YP_006018230.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-GD]
gi|416111966|ref|ZP_11592990.1| DEAD/DEAH box helicase domain protein [Riemerella anatipestifer
RA-YM]
gi|312445265|gb|ADQ81620.1| DEAD/DEAH box helicase domain protein [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|315022262|gb|EFT35290.1| DEAD/DEAH box helicase domain protein [Riemerella anatipestifer
RA-YM]
gi|325336611|gb|ADZ12885.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-GD]
gi|380459951|gb|AFD55635.1| dead/deah box helicase domain protein [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
Length = 371
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 129/230 (56%), Gaps = 45/230 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L ++K+I G+ PT IQ+ IP +G+D+IG A+TG+GKT AF +P++Q
Sbjct: 3 FTQLSLSSPILKAISDAGYTTPTAIQEKAIPTIL-EGRDLIGCAQTGTGKTAAFSIPLLQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L E K GK +RALI+TPTRELA+Q+ +++++ +K +N++ +
Sbjct: 62 -ILSETPKKGK----------------SVRALILTPTRELAIQIQENIEQYSKFLNIKHL 104
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ KQER L ++++ TPGRL +LM G L+ L + VLDEADRM++
Sbjct: 105 SIFGGVPQGKQERALNQGVDILIATPGRLLDLMQQG---LLSLSQIEILVLDEADRMLDM 161
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+ +P KKRQTL FSAT+
Sbjct: 162 GFVNDVKKILTKVP------------------------KKRQTLFFSATM 187
>gi|336419231|ref|ZP_08599497.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium sp.
11_3_2]
gi|336163922|gb|EGN66836.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium sp.
11_3_2]
Length = 528
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHMQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFIEDIEKI---LTFTN 179
>gi|449484526|ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
21-like [Cucumis sativus]
Length = 715
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 132/239 (55%), Gaps = 23/239 (9%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
++I +W E +L L+K++ R G+K P+PIQ A IP Q +D+IG AETGSGKT
Sbjct: 288 SKIPRPMRSWTESKLTTELLKAVERAGYKSPSPIQMAAIPLGLQQ-RDVIGIAETGSGKT 346
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 347 AAFVLPMLAYITR--------LPPINEENEAEGPY----AVVMAPTRELAQQIEDETVKF 394
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 395 SHYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCL---ERRYAVLNQCNYVVL 451
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADRMI+ G ++ ++D +P +N E + E+ ++ R T +FSAT+
Sbjct: 452 DEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDE-------KKXYRTTYMFSATM 503
>gi|189208750|ref|XP_001940708.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976801|gb|EDU43427.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 805
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 119/238 (50%), Gaps = 48/238 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ + L +++ + +GF EPTPIQ +P A QGKD++G AETGSGKT AF +PI+
Sbjct: 276 SFQAMSLSRPILRGLASVGFTEPTPIQNKAVPIAM-QGKDVVGGAETGSGKTAAFLIPIL 334
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINV 291
+RLL Y PK R I PTRELA+Q + ++A ++
Sbjct: 335 ERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDI 375
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ GG ST QE +LK RP++V+ TPGR + M VE L VLDEADRM
Sbjct: 376 TFALMAGGFSTRDQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--HLEILVLDEADRM 433
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+E G +L I+ +P K RQT++FSAT+ S D
Sbjct: 434 LEEGFESQLNEILTTIP------------------------KSRQTMLFSATMTSSVD 467
>gi|142982528|sp|A2QAX7.1|DRS1_ASPNC RecName: Full=ATP-dependent RNA helicase drs1
gi|134055839|emb|CAK37361.1| unnamed protein product [Aspergillus niger]
Length = 824
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 129/253 (50%), Gaps = 48/253 (18%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
EEE SE+ ++ ++ E L +++ + + F PTPIQ+ IP A GKDI+G+A
Sbjct: 295 EEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALL-GKDIVGSA 353
Query: 219 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELAL 276
TGSGKT AF +PI++RLL + P+ R I+ PTRELA+
Sbjct: 354 VTGSGKTAAFVVPILERLL-------------------FRPRKVPTSRVAILMPTRELAV 394
Query: 277 QVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 336
Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M V+
Sbjct: 395 QCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD 454
Query: 337 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 396
TL VLDEADRM+E+G EL I+ +P K RQ
Sbjct: 455 --TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSRQ 488
Query: 397 TLVFSATIALSAD 409
T++FSAT+ + D
Sbjct: 489 TMLFSATMTDTVD 501
>gi|330915742|ref|XP_003297149.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
gi|311330325|gb|EFQ94748.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
Length = 805
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 119/238 (50%), Gaps = 48/238 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ + L +++ + +GF EPTPIQ +P A QGKD++G AETGSGKT AF +PI+
Sbjct: 276 SFQAMSLSRPILRGLASVGFTEPTPIQNKAVPIAM-QGKDVVGGAETGSGKTAAFLIPIL 334
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINV 291
+RLL Y PK R I PTRELA+Q + ++A ++
Sbjct: 335 ERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDI 375
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ GG ST QE +LK RP++V+ TPGR + M VE L VLDEADRM
Sbjct: 376 TFALMAGGFSTRDQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--HLEILVLDEADRM 433
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+E G +L I+ +P K RQT++FSAT+ S D
Sbjct: 434 LEEGFESQLNEILTTIP------------------------KSRQTMLFSATMTSSVD 467
>gi|308484167|ref|XP_003104284.1| hypothetical protein CRE_25008 [Caenorhabditis remanei]
gi|308258253|gb|EFP02206.1| hypothetical protein CRE_25008 [Caenorhabditis remanei]
Length = 572
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 131/254 (51%), Gaps = 51/254 (20%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
+N P + +SE ++T+ ++EL + +++ + + TP+Q ACIP G
Sbjct: 24 TNAPQPVQ---ISEENMTTK--KFSELGVSSWIIQQLQTMHISTATPVQAACIPKIL-SG 77
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 271
DI+G A TG+GKTLAF +PI+Q+L + P G + ALI+TPT
Sbjct: 78 SDILGCARTGTGKTLAFAIPILQKLSID-------------------PYG-IYALILTPT 117
Query: 272 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 331
RELA Q+ D V K I ++ IVGG S Q R L RP +VV TPGRL +L++
Sbjct: 118 RELAFQIADQFSAVGKPITLKCSVIVGGRSLIHQARELSDRPHIVVATPGRLADLINSDA 177
Query: 332 KHLVELH-TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL 390
+ + ++ + FFVLDEADRM+E + +L+ I + +P
Sbjct: 178 EIIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFEAIPA--------------------- 216
Query: 391 QRKKRQTLVFSATI 404
KRQTL+ SATI
Sbjct: 217 ---KRQTLLLSATI 227
>gi|159489242|ref|XP_001702606.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280628|gb|EDP06385.1| predicted protein [Chlamydomonas reinhardtii]
Length = 602
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 131/247 (53%), Gaps = 50/247 (20%)
Query: 162 LVSEAEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAE 219
SE T+F + + +L + L+K++ LG+K PTPIQ ACIP A G+DI G+A
Sbjct: 136 FYSETPEGTKFSSASFADLNISRPLLKAVEALGYKSPTPIQAACIPLAL-AGRDICGSAV 194
Query: 220 TGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQ 277
TGSGKT AF LP ++RLL + P+G L++TPTRELA+Q
Sbjct: 195 TGSGKTAAFALPFLERLL-------------------HRPRGLAATYVLVLTPTRELAVQ 235
Query: 278 VTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVEL 337
+ ++++A+ ++ V IVGG+S + Q L+ PE+VV TPGRL + + + V L
Sbjct: 236 IHSMIEKLAQFTDINVALIVGGLSLQVQAITLRQSPEVVVATPGRLIDHLRNSQS--VGL 293
Query: 338 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQT 397
L+ VLDEADR++E G E+ ++ P +KRQT
Sbjct: 294 EDLAVLVLDEADRLLEMGFREEVAEVVRAAP------------------------RKRQT 329
Query: 398 LVFSATI 404
++FSAT
Sbjct: 330 MLFSATF 336
>gi|367052807|ref|XP_003656782.1| hypothetical protein THITE_2121904 [Thielavia terrestris NRRL 8126]
gi|347004047|gb|AEO70446.1| hypothetical protein THITE_2121904 [Thielavia terrestris NRRL 8126]
Length = 718
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 147/288 (51%), Gaps = 27/288 (9%)
Query: 118 QKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNE 177
Q + KNL +KK + K + + +E+ ++ I +W E
Sbjct: 236 QAAERKNLGKHWSEKKLEDMKERDWRIFKENFGIA----------TKGGAIPNPMRSWQE 285
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLL 237
L L++ ++ +G+ EPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++ +
Sbjct: 286 SNLPRRLLEIVHSVGYDEPTPIQRAAIPIAL-QARDLIGVAVTGSGKTAAFLLPLLVYIS 344
Query: 238 EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIV 297
E L E+ + P ALI+ PTREL Q+ ++ A + VV IV
Sbjct: 345 E--------LPPLTEDNKNDGPY----ALILAPTRELVQQIETEARKFADPLGFTVVSIV 392
Query: 298 GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 357
GG S E+Q L+ E++V TPGRL + + E+ L+ + ++DEADRMI+ G
Sbjct: 393 GGHSLEEQAFALRNGAEIIVATPGRLVDCL---ERRLLVFSQCCYIIMDEADRMIDQGFE 449
Query: 358 RELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
L I+D LP+TN + + +E Q + + RQT++++AT+
Sbjct: 450 EPLTKILDALPVTNEKPDTEDAENPQLMSRYLGGKDRYRQTMMYTATM 497
>gi|289766283|ref|ZP_06525661.1| ATP-dependent RNA helicase [Fusobacterium sp. D11]
gi|289717838|gb|EFD81850.1| ATP-dependent RNA helicase [Fusobacterium sp. D11]
Length = 528
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFIEDIEKI---LTFTN 179
>gi|255079330|ref|XP_002503245.1| predicted protein [Micromonas sp. RCC299]
gi|226518511|gb|ACO64503.1| predicted protein [Micromonas sp. RCC299]
Length = 605
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 123/240 (51%), Gaps = 45/240 (18%)
Query: 167 EISTEFDAWN--ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGK 224
E T F A N EL L L+K+ LG+ PTPIQ A +P A G+DI G A TGSGK
Sbjct: 142 EKDTTFSAANFTELNLSRPLVKACGALGYASPTPIQAAVVPLAL-TGRDICGRAVTGSGK 200
Query: 225 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKE 284
T AF LP ++R+L K P L++ PTRELA+QV +
Sbjct: 201 TAAFMLPCLERMLHRGPK----------------PVAATHVLVLVPTRELAVQVHQMTER 244
Query: 285 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
+A+ +VR +VGG+S Q L++RPE+VV TPGRL + + H V L L+ V
Sbjct: 245 LAQFTSVRAALVVGGLSANVQATSLRSRPEVVVATPGRLIDHVRN--THSVGLEDLATLV 302
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
LDEADR++E G E++ I+ P K+RQT++FSAT+
Sbjct: 303 LDEADRLLEMGFLEEIREIVRHCP------------------------KRRQTMLFSATL 338
>gi|409083507|gb|EKM83864.1| hypothetical protein AGABI1DRAFT_117335, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 701
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 123/226 (54%), Gaps = 42/226 (18%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 243
LMK++ LGF +PTPIQ + IP A GKD++G A TGSGKT AF +P+++RLL
Sbjct: 205 LMKAVTNLGFNKPTPIQASTIPVAL-LGKDVVGNAVTGSGKTAAFMIPMIERLL------ 257
Query: 244 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTE 303
EKG++A +R L++ PTRELA+Q + +++ ++R+ +VGG+S +
Sbjct: 258 ---FREKGKKA------AAIRCLVLVPTRELAVQCYEVGTKLSIHTDIRLCLVVGGLSLK 308
Query: 304 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 363
QE L++RP++V+ TPGRL + + L L V+DEADR++ G EL I
Sbjct: 309 SQEADLRSRPDIVIATPGRLIDHIRNSAS--FSLDALDILVIDEADRILSEGFSDELTEI 366
Query: 364 IDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
I P + RQT++FSAT+ S D
Sbjct: 367 IKSCP------------------------RSRQTMLFSATMTDSVD 388
>gi|402814785|ref|ZP_10864378.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus alvei DSM
29]
gi|402507156|gb|EJW17678.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus alvei DSM
29]
Length = 526
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 139/254 (54%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E L P ++++I LGF+E TPIQ+ IP A G+D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFGLEPKVLQAITELGFEESTPIQEKAIPVAM-TGRDLIGQAQTGTGKTAAFGIPLIS 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ E+ ++ALI+TPTRELA+QV D + ++ + VR +
Sbjct: 63 KIDPTEER--------------------VKALIMTPTRELAIQVADEIGKLTRFKGVRSL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK P++++GTPGRL + ++ + + L ++ VLDEAD M++
Sbjct: 103 PIYGGQDIGRQIRALKKHPQIIIGTPGRLLDHIN---RKTIRLDDVATVVLDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++ SI+ ++P ++RQT++FSAT+ L+
Sbjct: 160 GFMEDITSILSLVP------------------------EQRQTMLFSATMPPNIQKLANQ 195
Query: 410 FRKKLKHGSLKLKQ 423
F ++ +H S+ K
Sbjct: 196 FLREPEHVSVMPKH 209
>gi|57867605|ref|YP_189253.1| DEAD-box ATP dependent DNA helicase [Staphylococcus epidermidis
RP62A]
gi|293366046|ref|ZP_06612734.1| ATP-dependent RNA helicase DeaD [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417646901|ref|ZP_12296753.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU144]
gi|417660218|ref|ZP_12309807.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU045]
gi|417908989|ref|ZP_12552739.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU037]
gi|417912456|ref|ZP_12556148.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU105]
gi|418613191|ref|ZP_13176207.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU117]
gi|418617909|ref|ZP_13180795.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU120]
gi|418622358|ref|ZP_13185110.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU123]
gi|418627678|ref|ZP_13190250.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU126]
gi|418629929|ref|ZP_13192422.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU127]
gi|420164449|ref|ZP_14671178.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM095]
gi|420166528|ref|ZP_14673212.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM088]
gi|420169264|ref|ZP_14675867.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM087]
gi|420171687|ref|ZP_14678222.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM070]
gi|420173608|ref|ZP_14680099.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM067]
gi|420186914|ref|ZP_14692938.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM039]
gi|420195899|ref|ZP_14701683.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM021]
gi|420207903|ref|ZP_14713388.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM008]
gi|420210262|ref|ZP_14715691.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM003]
gi|420212518|ref|ZP_14717867.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM001]
gi|420215194|ref|ZP_14720465.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH05005]
gi|420216699|ref|ZP_14721897.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH05001]
gi|420223686|ref|ZP_14728581.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH08001]
gi|420226143|ref|ZP_14730965.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH06004]
gi|420230941|ref|ZP_14735618.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH04003]
gi|420235977|ref|ZP_14740508.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH051475]
gi|81673916|sp|Q5HME0.1|Y1688_STAEQ RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SERP1688
gi|57638263|gb|AAW55051.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
epidermidis RP62A]
gi|291319769|gb|EFE60127.1| ATP-dependent RNA helicase DeaD [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329726161|gb|EGG62633.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU144]
gi|329734135|gb|EGG70453.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU045]
gi|341650668|gb|EGS74484.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU105]
gi|341654629|gb|EGS78368.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU037]
gi|374816627|gb|EHR80828.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU117]
gi|374817170|gb|EHR81356.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU120]
gi|374826952|gb|EHR90827.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU123]
gi|374829124|gb|EHR92938.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU126]
gi|374832448|gb|EHR96158.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU127]
gi|394231554|gb|EJD77180.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM095]
gi|394231727|gb|EJD77351.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM087]
gi|394233535|gb|EJD79136.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM088]
gi|394236802|gb|EJD82305.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM070]
gi|394239645|gb|EJD85080.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM067]
gi|394256880|gb|EJE01804.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM039]
gi|394262500|gb|EJE07262.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM021]
gi|394274923|gb|EJE19318.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM008]
gi|394276496|gb|EJE20834.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM003]
gi|394279639|gb|EJE23942.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM001]
gi|394282474|gb|EJE26667.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH05005]
gi|394287184|gb|EJE31151.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH08001]
gi|394291378|gb|EJE35190.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH05001]
gi|394292629|gb|EJE36369.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH06004]
gi|394295824|gb|EJE39460.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH04003]
gi|394301613|gb|EJE45068.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH051475]
Length = 509
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|328771766|gb|EGF81805.1| hypothetical protein BATDEDRAFT_16042 [Batrachochytrium
dendrobatidis JAM81]
Length = 584
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 135/243 (55%), Gaps = 17/243 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I W+E L ++ +I R+G+KEPTPIQ+ IP Q +DIIG AETGSGKT +
Sbjct: 156 IPNPLRTWDECELSETILGAISRIGYKEPTPIQRQAIPMGL-QNRDIIGIAETGSGKTAS 214
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ K + E E + +G ALI+ PTRELA Q+ + A+
Sbjct: 215 FVIPML-----------KFITEMPPLTEINSSQGPY-ALILAPTRELAQQIESETSKFAR 262
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ V IVGG + E Q L+ +V+ TPGRL + + E+ ++ L ++ V+DE
Sbjct: 263 EMGFICVSIVGGHAVEGQAFNLRNGAHIVIATPGRLRDCL---EQRILVLSQCTYVVMDE 319
Query: 348 ADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 406
ADRM++ G +L+ I+D +P++N + +SE Q ++ RQT++FSAT+ +
Sbjct: 320 ADRMVDMGFEPDLKFILDAMPVSNIKPDSDESENVQLLRELTGKVTPFRQTVMFSATMPV 379
Query: 407 SAD 409
+ +
Sbjct: 380 AVE 382
>gi|420198021|ref|ZP_14703739.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM020]
gi|420228554|ref|ZP_14733304.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH05003]
gi|394264952|gb|EJE09618.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM020]
gi|394294660|gb|EJE38328.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH05003]
Length = 509
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|449455778|ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Cucumis
sativus]
Length = 715
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 133/241 (55%), Gaps = 27/241 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
++I +W E +L L+K++ R G+K P+PIQ A IP Q +D+IG AETGSGKT
Sbjct: 288 SKIPRPMRSWTESKLTTELLKAVERAGYKSPSPIQMAAIPLGLQQ-RDVIGIAETGSGKT 346
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 347 AAFVLPMLAYITR--------LPPINEENEAEGPY----AVVMAPTRELAQQIEDETVKF 394
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 395 SHYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCL---ERRYAVLNQCNYVVL 451
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSAT 403
DEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSAT
Sbjct: 452 DEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSAT 502
Query: 404 I 404
+
Sbjct: 503 M 503
>gi|380690627|gb|AFD93382.1| DEAD box ATP-dependent RNA helicase, partial [Cydia pomonella]
Length = 459
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 140/240 (58%), Gaps = 16/240 (6%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
+I +W E H +M I ++G+K PTPIQ+ IP Q +DIIG AETGSGKT
Sbjct: 107 GKIPNPIRSWKEAGFHSDIMDIINKVGYKSPTPIQRQAIPIGL-QNRDIIGVAETGSGKT 165
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
LAF +P++ ++ K +M E+A++ P A+I+ PTRELA Q+ + +
Sbjct: 166 LAFLIPLLT-WIQSLPKNERM-----EDADQ-GPY----AIILAPTRELAQQIEEETNKF 214
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
+ + V +VGG+S E+Q L+ E+V+ TPGRL +++ E + L+ ++ VL
Sbjct: 215 GVPLGITSVVVVGGLSREEQGFKLRLGCEIVIATPGRLIDVL---ENRYLVLNRCTYVVL 271
Query: 346 DEADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADRMI+ G ++Q I++ +P++N + +E + + ++K RQT++F+AT+
Sbjct: 272 DEADRMIDMGFEPDVQKILEYMPVSNIKPDTDAAEDASVLLANYNSKKKYRQTVMFTATM 331
>gi|317025749|ref|XP_001389716.2| ATP-dependent RNA helicase drs1 [Aspergillus niger CBS 513.88]
Length = 827
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 129/253 (50%), Gaps = 48/253 (18%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
EEE SE+ ++ ++ E L +++ + + F PTPIQ+ IP A GKDI+G+A
Sbjct: 295 EEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALL-GKDIVGSA 353
Query: 219 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELAL 276
TGSGKT AF +PI++RLL + P+ R I+ PTRELA+
Sbjct: 354 VTGSGKTAAFVVPILERLL-------------------FRPRKVPTSRVAILMPTRELAV 394
Query: 277 QVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 336
Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M V+
Sbjct: 395 QCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD 454
Query: 337 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 396
TL VLDEADRM+E+G EL I+ +P K RQ
Sbjct: 455 --TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSRQ 488
Query: 397 TLVFSATIALSAD 409
T++FSAT+ + D
Sbjct: 489 TMLFSATMTDTVD 501
>gi|284037338|ref|YP_003387268.1| DEAD/DEAH box helicase [Spirosoma linguale DSM 74]
gi|283816631|gb|ADB38469.1| DEAD/DEAH box helicase domain protein [Spirosoma linguale DSM 74]
Length = 485
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 125/230 (54%), Gaps = 41/230 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL L ++K++ G+ PTPIQ+ IP + +D++G A+TG+GKT AF +PI+Q
Sbjct: 3 FSELSLIDPILKALTEEGYTNPTPIQEKAIPILLSR-RDLLGCAQTGTGKTAAFAIPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L EER K+ P+ ++ LI+TPTRELA+Q+ + + +N+R
Sbjct: 62 LLSEERSKSTG------------GPR-RIKTLILTPTRELAIQIAESFTAYGRHLNIRNT 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S Q LKA ++++ TPGRL +LM+ G + L + FFVLDEADRM++
Sbjct: 109 VIFGGVSQHSQVNTLKAGVDVLIATPGRLLDLMNQG---FISLRDVQFFVLDEADRMLDM 165
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ +I LP RQ+L FSAT+
Sbjct: 166 GFIHDVKKVITKLPT------------------------HRQSLFFSATM 191
>gi|301122021|ref|XP_002908737.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262099499|gb|EEY57551.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 518
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 133/282 (47%), Gaps = 52/282 (18%)
Query: 133 KKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTE-----FDAWNELRLHPLLMKS 187
K+++ K+ E + VS+ D + E + ++ E ++ L + P L+K
Sbjct: 7 KRRRAPAPKLLNEESTPAVSSDSDSSIETIAKSDKVQVENASNILISFLNLGVDPWLVKR 66
Query: 188 IYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKML 247
LG + PTP+Q CIP G+D+IG A+TGSGKT AF LPI+ L
Sbjct: 67 CELLGIRHPTPVQAHCIPPIL-AGRDVIGCAQTGSGKTAAFALPILHTL----------- 114
Query: 248 EEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQER 307
+ Y P AL++TPTRELA Q+ D + VR IVGG+ KQ
Sbjct: 115 -----SKDPYGP----YALVLTPTRELAFQIADQFNAFGSSMAVRCAVIVGGVDMLKQSL 165
Query: 308 LLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 367
L+ RP ++V TPGR + + + + L + + VLDEADR+++ ++L I D L
Sbjct: 166 TLQQRPHIIVATPGRFRDHLLRADPPNISL--VKYVVLDEADRLLDVSFAKDLSFIFDKL 223
Query: 368 PMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
P KRQTL+FSAT+ + D
Sbjct: 224 P------------------------TKRQTLLFSATMTANLD 241
>gi|251812202|ref|ZP_04826675.1| ATP-dependent RNA helicase [Staphylococcus epidermidis BCM-HMP0060]
gi|251804299|gb|EES56956.1| ATP-dependent RNA helicase [Staphylococcus epidermidis BCM-HMP0060]
Length = 528
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 23 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 81
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 82 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 120
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 121 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 177
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 178 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 204
>gi|237743040|ref|ZP_04573521.1| ATP-dependent RNA helicase [Fusobacterium sp. 7_1]
gi|229433600|gb|EEO43812.1| ATP-dependent RNA helicase [Fusobacterium sp. 7_1]
Length = 528
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFIEDIEKI---LTFTN 179
>gi|350638693|gb|EHA27049.1| hypothetical protein ASPNIDRAFT_130294 [Aspergillus niger ATCC
1015]
Length = 793
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 129/253 (50%), Gaps = 48/253 (18%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
EEE SE+ ++ ++ E L +++ + + F PTPIQ+ IP A GKDI+G+A
Sbjct: 268 EEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALL-GKDIVGSA 326
Query: 219 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELAL 276
TGSGKT AF +PI++RLL + P+ R I+ PTRELA+
Sbjct: 327 VTGSGKTAAFVVPILERLL-------------------FRPRKVPTSRVAILMPTRELAV 367
Query: 277 QVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 336
Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M V+
Sbjct: 368 QCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD 427
Query: 337 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 396
TL VLDEADRM+E+G EL I+ +P K RQ
Sbjct: 428 --TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSRQ 461
Query: 397 TLVFSATIALSAD 409
T++FSAT+ + D
Sbjct: 462 TMLFSATMTDTVD 474
>gi|418609346|ref|ZP_13172499.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU065]
gi|374407748|gb|EHQ78596.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU065]
Length = 509
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|358347102|ref|XP_003637601.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355503536|gb|AES84739.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 781
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 133/239 (55%), Gaps = 23/239 (9%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
++I +W E +L L+K++ + G+K P+PIQ A IP Q +D+IG AETGSGKT
Sbjct: 279 SKIPRPMRSWVESKLSQELLKAVEKAGYKTPSPIQMAAIPLGLQQ-RDVIGVAETGSGKT 337
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 338 AAFVLPMLSYITR--------LPPISEENEAEGPY----AVVMAPTRELAQQIEDETVKF 385
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 386 AQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCL---ERRYAVLNQCNYVVL 442
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADRMI+ G ++ ++D +P +N E + E+ +R R T +FSAT+
Sbjct: 443 DEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDE-------KRIYRTTYMFSATM 494
>gi|282876512|ref|ZP_06285378.1| putative ATP-dependent RNA helicase DeaD [Staphylococcus
epidermidis SK135]
gi|417656935|ref|ZP_12306613.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU028]
gi|417913851|ref|ZP_12557512.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU109]
gi|418413340|ref|ZP_12986582.1| hypothetical protein HMPREF9281_02186 [Staphylococcus epidermidis
BVS058A4]
gi|418604120|ref|ZP_13167487.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU041]
gi|418624602|ref|ZP_13187275.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU125]
gi|418663726|ref|ZP_13225235.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU081]
gi|419768504|ref|ZP_14294626.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-250]
gi|419771588|ref|ZP_14297639.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-K]
gi|420182053|ref|ZP_14688195.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM049]
gi|420202795|ref|ZP_14708383.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM018]
gi|420220941|ref|ZP_14725896.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH04008]
gi|420233548|ref|ZP_14738156.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH051668]
gi|421608789|ref|ZP_16050002.1| DEAD-box ATP dependent DNA helicase [Staphylococcus epidermidis
AU12-03]
gi|281294764|gb|EFA87292.1| putative ATP-dependent RNA helicase DeaD [Staphylococcus
epidermidis SK135]
gi|329735713|gb|EGG71996.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU028]
gi|341654309|gb|EGS78056.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU109]
gi|374405916|gb|EHQ76827.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU041]
gi|374411264|gb|EHQ81981.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU081]
gi|374827164|gb|EHR91030.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU125]
gi|383359868|gb|EID37278.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-250]
gi|383361086|gb|EID38468.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus IS-K]
gi|394250517|gb|EJD95699.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM049]
gi|394268974|gb|EJE13519.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM018]
gi|394285391|gb|EJE29470.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH04008]
gi|394299830|gb|EJE43358.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIH051668]
gi|406655530|gb|EKC81956.1| DEAD-box ATP dependent DNA helicase [Staphylococcus epidermidis
AU12-03]
gi|410879227|gb|EKS27078.1| hypothetical protein HMPREF9281_02186 [Staphylococcus epidermidis
BVS058A4]
Length = 509
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|354580517|ref|ZP_08999422.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
gi|353202948|gb|EHB68397.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
Length = 529
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 138/250 (55%), Gaps = 53/250 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + L P ++++I LGF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP++
Sbjct: 4 FADFGLEPRVLQAITELGFEEATPIQSQSIPIAL-TGKDMIGQAQTGTGKTAAFGLPLIH 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +E E+ + AL++TPTRELA+QV + + ++++ +R +
Sbjct: 63 KIAKEEER--------------------IVALVMTPTRELAIQVAEEIGKLSRFKGIRSL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG +Q R LK +P++++GTPGRL + ++ + + L + VLDEAD M++
Sbjct: 103 AIYGGQDIGRQIRALKKKPQIIIGTPGRLLDHIN---RKTIRLDDVQTVVLDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++QSI+ ++P + RQTL+FSAT+ L++
Sbjct: 160 GFMDDIQSILKLVP------------------------ENRQTLLFSATMPPNIQKLASQ 195
Query: 410 FRKKLKHGSL 419
F K +H S+
Sbjct: 196 FLKDPEHVSV 205
>gi|336274640|ref|XP_003352074.1| hypothetical protein SMAC_00622 [Sordaria macrospora k-hell]
gi|380096359|emb|CCC06407.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 730
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 145/288 (50%), Gaps = 27/288 (9%)
Query: 118 QKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNE 177
+ EQ KNL +KK + K + + +E+ ++ I +W+E
Sbjct: 250 ETEQRKNLGKHWSEKKLEDMKERDWRIFKENFGIA----------TKGGAIPNPMRSWDE 299
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLL 237
L L+ + +G+ EPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++ +
Sbjct: 300 STLPRRLLDIVKNVGYDEPTPIQRAAIPIAL-QARDLIGVAVTGSGKTAAFLLPLLVYIS 358
Query: 238 EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIV 297
E L E + P ALI+ PTREL Q+ K+ A + VV IV
Sbjct: 359 E--------LPPLTEYNKNDGPY----ALILAPTRELVQQIESEAKKFATPLGFTVVSIV 406
Query: 298 GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 357
GG S E+Q L+ E++V TPGRL + + E+ L+ + ++DEADRMI+ G
Sbjct: 407 GGHSLEEQAYALRNGAEIIVATPGRLVDCL---ERRLLVFSQCCYTIMDEADRMIDQGFE 463
Query: 358 RELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
L I+D +P+TN + +E Q + + RQT++++AT+
Sbjct: 464 EPLTKILDAMPVTNEKPDTDDAENPQLMSRYVDGKDRYRQTMMYTATM 511
>gi|149245944|ref|XP_001527442.1| hypothetical protein LELG_02271 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013518|sp|A5DY34.1|DRS1_LODEL RecName: Full=ATP-dependent RNA helicase DRS1
gi|146449836|gb|EDK44092.1| hypothetical protein LELG_02271 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 686
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 130/231 (56%), Gaps = 45/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL+L ++KS+ +LGF PTP+Q + IP A GKDI+ +A+TGSGKT A+ +PI++
Sbjct: 198 FQELQLSRPILKSLQQLGFTVPTPVQASTIPIALL-GKDIVASAQTGSGKTAAYLIPIIE 256
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-NVRV 293
RLL + +A+I+TPTRELA+QV D +++ + + N+
Sbjct: 257 RLLYVKNSTST------------------KAIILTPTRELAIQVHDVGRKLGQFVSNLNF 298
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
VGG+S ++QE+ LK RP++V+ TPGRL + + VE + ++DEADRM+E
Sbjct: 299 GMAVGGLSLKQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSVE--DVQVLIIDEADRMLE 356
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G EL I+ ++P ++KRQTL+FSAT+
Sbjct: 357 EGFQEELTEILSLIP-----------------------KQKRQTLLFSATM 384
>gi|416128218|ref|ZP_11597223.1| DEAD/DEAH box helicase family protein [Staphylococcus epidermidis
FRI909]
gi|319399568|gb|EFV87823.1| DEAD/DEAH box helicase family protein [Staphylococcus epidermidis
FRI909]
Length = 509
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|433447995|ref|ZP_20411254.1| DEAD-box ATP-dependent RNA helicase CshA [Anoxybacillus
flavithermus TNO-09.006]
gi|431999627|gb|ELK20547.1| DEAD-box ATP-dependent RNA helicase CshA [Anoxybacillus
flavithermus TNO-09.006]
Length = 471
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 129/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E L P LMK++ ++GF+E TPIQ A IP + Q +D+IG A+TG+GKT AFG+P+++
Sbjct: 7 FKEFGLSPELMKAVSKMGFEEATPIQAATIPLSL-QNRDVIGQAQTGTGKTAAFGIPLIE 65
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + +A ++A+++ PTRELA+QV++ L ++ VRV+
Sbjct: 66 KI------------DMNNDA--------VQAIVVAPTRELAIQVSEELYKIGSTKRVRVL 105
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG E+Q R LK P ++VGTPGR+ + + L +HT+ VLDEAD M+
Sbjct: 106 PIYGGQDIERQIRALKKHPHIIVGTPGRVLDHIQRRTLRLQNVHTV---VLDEADEMLNM 162
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P +RQTL+FSAT+
Sbjct: 163 GFVEDIEAILSHVP------------------------TERQTLLFSATM 188
>gi|418326967|ref|ZP_12938142.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU071]
gi|365224073|gb|EHM65343.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU071]
Length = 509
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|423137936|ref|ZP_17125579.1| hypothetical protein HMPREF9942_01717 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371958886|gb|EHO76587.1| hypothetical protein HMPREF9942_01717 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 528
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFIEDIEKI---LTFTN 179
>gi|445499097|ref|ZP_21465952.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
gi|444789092|gb|ELX10640.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
Length = 550
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 42/232 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + L P +++++ G+ PTPIQ IP QG+D++GAA+TG+GKT F LPI+Q
Sbjct: 67 FADFGLSPHILRALTDQGYVHPTPIQAQAIPVLL-QGRDVMGAAQTGTGKTAGFALPIIQ 125
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
LL + +P H +RALI+TPTRELA+QV +++K A+ +R
Sbjct: 126 MLL-------------AHASTSTSPARHPVRALILTPTRELAVQVAENVKAYAQHTPLRS 172
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GGM + Q +LKA E+V+ TPGRL + + E+ + L + V+DEADRM++
Sbjct: 173 TVVFGGMDMKGQTVILKAGVEIVIATPGRLLDHV---EQKNISLGQVQMLVMDEADRMLD 229
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +LQ II++LP KRQ L+FSAT +
Sbjct: 230 MGFLPDLQRIINLLP------------------------AKRQNLMFSATFS 257
>gi|418633569|ref|ZP_13195977.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU129]
gi|420190985|ref|ZP_14696922.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM037]
gi|420204908|ref|ZP_14710446.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM015]
gi|374838907|gb|EHS02440.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU129]
gi|394258083|gb|EJE02975.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM037]
gi|394271629|gb|EJE16118.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM015]
Length = 509
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLETMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|420178510|ref|ZP_14684840.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM057]
gi|420181304|ref|ZP_14687507.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM053]
gi|420200772|ref|ZP_14706412.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM031]
gi|394246233|gb|EJD91494.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM057]
gi|394246652|gb|EJD91906.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM053]
gi|394267516|gb|EJE12103.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM031]
Length = 509
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|260495553|ref|ZP_05815678.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_33]
gi|260196895|gb|EEW94417.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_33]
Length = 528
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFVEDIEKI---LTFTN 179
>gi|253573302|ref|ZP_04850645.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251846830|gb|EES74835.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 518
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 141/257 (54%), Gaps = 53/257 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
+ + + L P ++++I LGF+E TPIQ IP A G+D+IG A+TG+GKT AFGLP
Sbjct: 1 MNTFADFGLEPKVLQAITELGFEEATPIQAKSIPIAL-SGRDLIGQAQTGTGKTAAFGLP 59
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
++ ++ +E ++ + AL++TPTRELA+QV + + ++++
Sbjct: 60 LINKIPKEEDR--------------------IVALVMTPTRELAIQVAEEIGKLSRFKGT 99
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
R +PI GG +Q R LK +P++++GTPGRL + ++ + ++L + VLDEAD M
Sbjct: 100 RSLPIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLDDVKTVVLDEADEM 156
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----L 406
++ G ++QSI+ ++P + RQT++FSAT+ L
Sbjct: 157 LDMGFMDDIQSILKLVP------------------------EDRQTMLFSATMPANIQKL 192
Query: 407 SADFRKKLKHGSLKLKQ 423
+ F K +H S+ KQ
Sbjct: 193 AQQFLKNPEHVSVIPKQ 209
>gi|164428960|ref|XP_001728501.1| hypothetical protein NCU11175 [Neurospora crassa OR74A]
gi|157072353|gb|EDO65410.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 857
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 124/241 (51%), Gaps = 48/241 (19%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E ++ E+ L +++ + +GF +PTPIQ IP + GKD++G A TGSGKT AF +
Sbjct: 291 EMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISL-MGKDVVGGAVTGSGKTAAFVV 349
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKG 288
PI++RLL Y PK R +I+TPTRELA+Q ++A
Sbjct: 350 PILERLL-------------------YRPKKVPTTRVVILTPTRELAIQCHAVAVKLASH 390
Query: 289 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 348
+++ VGG+S + QE L+ RP++V+ TPGR + M V+ T+ VLDEA
Sbjct: 391 TDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD--TIEILVLDEA 448
Query: 349 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 408
DRM+E+G EL I+ LP K RQT++FSAT+ S
Sbjct: 449 DRMLEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSSV 484
Query: 409 D 409
D
Sbjct: 485 D 485
>gi|358370127|dbj|GAA86739.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 832
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 129/253 (50%), Gaps = 48/253 (18%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
EEE SE+ ++ ++ E L +++ + + F PTPIQ+ IP A GKDI+G+A
Sbjct: 300 EEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALL-GKDIVGSA 358
Query: 219 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELAL 276
TGSGKT AF +PI++RLL + P+ R I+ PTRELA+
Sbjct: 359 VTGSGKTAAFVVPILERLL-------------------FRPRKVPTSRVAILMPTRELAV 399
Query: 277 QVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 336
Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M V+
Sbjct: 400 QCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD 459
Query: 337 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 396
TL VLDEADRM+E+G EL I+ +P K RQ
Sbjct: 460 --TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSRQ 493
Query: 397 TLVFSATIALSAD 409
T++FSAT+ + D
Sbjct: 494 TMLFSATMTDTVD 506
>gi|170083961|ref|XP_001873204.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650756|gb|EDR14996.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 355
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 124/226 (54%), Gaps = 42/226 (18%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 243
L+KSI LGF +PTPIQ A IP A GKD++G A TGSGKT AF +P+++RLL
Sbjct: 7 LLKSIASLGFNKPTPIQAAAIPVAL-LGKDVVGNAMTGSGKTAAFIIPMVERLLYR---- 61
Query: 244 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTE 303
EKG++A R L++ PTRELA+Q D +++ ++++ +VGG+S +
Sbjct: 62 -----EKGKKAAAT------RCLVLVPTRELAVQCFDVGVKLSTHTDIQLCLLVGGLSLK 110
Query: 304 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 363
QE L+ARP++V+ TPGRL + + L + VLDEADRM+ +G EL I
Sbjct: 111 SQEVALRARPDIVIATPGRLIDHIRNSPAF--TLDAIDILVLDEADRMLSDGFADELAEI 168
Query: 364 IDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
I P++ RQT++FSAT+ S D
Sbjct: 169 IKSCPVS------------------------RQTMLFSATMTDSVD 190
>gi|300120949|emb|CBK21191.2| unnamed protein product [Blastocystis hominis]
Length = 634
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 116/191 (60%), Gaps = 12/191 (6%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
++EA++ W E LH L++ + ++ +PT IQ+ I AA +GKD++GAA TGS
Sbjct: 129 IAEAKLLYGSTEWTEFHLHDSLVQKLTQIQCAKPTVIQEKAI-EAAFRGKDVLGAAPTGS 187
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 282
GKTLAF +P++ LL+ EE E+AE ++R +II+PTREL+LQ+ +
Sbjct: 188 GKTLAFCVPVIDWLLKHAS------EEPAEKAE-----WNVRCIIISPTRELSLQINRVI 236
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 342
+ + N+R ++GG++ KQER+L PE+++GTPGR+W M + L L F
Sbjct: 237 TRLTENTNIRTAGLIGGLAIPKQERMLSHNPEIIIGTPGRIWYFMENYKLGPSNLKNLRF 296
Query: 343 FVLDEADRMIE 353
V DEAD++++
Sbjct: 297 IVWDEADKLVQ 307
>gi|294783794|ref|ZP_06749118.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium sp.
1_1_41FAA]
gi|294480672|gb|EFG28449.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium sp.
1_1_41FAA]
Length = 529
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 120/197 (60%), Gaps = 26/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E E ++ H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------ENFETSDH-----HIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 109
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +FVLDEAD M+
Sbjct: 110 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFVLDEADEMLNM 166
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 167 GFIEDIEKI---LTFTN 180
>gi|379725028|ref|YP_005317159.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus 3016]
gi|386727777|ref|YP_006194103.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
gi|378573700|gb|AFC34010.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus 3016]
gi|384094902|gb|AFH66338.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
Length = 422
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 130/232 (56%), Gaps = 46/232 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L P ++K++ + + +PTPIQ+ IP G+D+ G A+TG+GKT AF LPI+Q
Sbjct: 3 FQQLQLIPPIIKALAKENYTQPTPIQEQAIPPVL-AGRDLFGCAQTGTGKTAAFLLPIIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGINVR 292
L ++ + P G +R+LI+TPTRELA+Q++D+ K N+R
Sbjct: 62 LLSTQQGR----------------PNGKRVIRSLILTPTRELAIQISDNAKAYGCFTNLR 105
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
IVGG+S QE+LL+ ++++ TPGRL +LM+ G V+L + VLDEADRM+
Sbjct: 106 YGVIVGGVSQRPQEQLLEQGMDILIATPGRLIDLMNQG---FVDLSHVQILVLDEADRML 162
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+ G +++ II LP+ KRQTL FSAT+
Sbjct: 163 DMGFIHDMKRIIAKLPV------------------------KRQTLFFSATM 190
>gi|344230065|gb|EGV61950.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 448
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 124/231 (53%), Gaps = 44/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL + L +S+ + +PT IQ ACIP +GKD IG A+TGSGKT+AFGLP++
Sbjct: 4 FHELGVADWLCESLNSMKIHKPTSIQAACIPEVL-KGKDCIGGAKTGSGKTIAFGLPMLH 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ E+ P G + L++TPTRELALQ+ + V +N+RV
Sbjct: 63 KWSED-------------------PFG-VYGLVLTPTRELALQIAEQFSAVGSSMNIRVK 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMIE 353
IVGG +Q ++ +P ++ TPGRL + +++ GE + L + F VLDEADR++
Sbjct: 103 VIVGGEDMIEQALAIQKKPHFIIATPGRLADHILNSGEDTINGLRRIKFLVLDEADRLLS 162
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
N ++L I ++LP KKRQTL+F+AT+
Sbjct: 163 NSFGKDLDRIFNVLP----------------------DSKKRQTLLFTATV 191
>gi|224135589|ref|XP_002322111.1| predicted protein [Populus trichocarpa]
gi|222869107|gb|EEF06238.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 134/241 (55%), Gaps = 27/241 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
++I +W E +L L+K++ R+ +K+P+PIQ A IP Q +D+IG AETGSGKT
Sbjct: 283 SKIPRPMRSWAESKLSSELLKAVERVVYKKPSPIQMAAIPLGLQQ-RDVIGIAETGSGKT 341
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 342 CAFVLPMLTYI--------SRLPPMSEENEAEGPY----AVVMAPTRELAQQIEDETVKF 389
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 390 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVL 446
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSAT 403
DEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSAT
Sbjct: 447 DEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSAT 497
Query: 404 I 404
+
Sbjct: 498 M 498
>gi|389873083|ref|YP_006380502.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
gi|388538332|gb|AFK63520.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
Length = 476
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 131/242 (54%), Gaps = 44/242 (18%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
F+++ E+ LHP L+K++ G+ +PTPIQ+ +P G+DI+GAA+TG+GKT AF LP
Sbjct: 15 FESFTEVGLHPDLLKAVMASGYTKPTPIQEQAMPLIM-DGRDIMGAAQTGTGKTAAFTLP 73
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGIN 290
++ RL+ + +P H +RALI+ PTRELA QV + +K +
Sbjct: 74 LLHRLMPMANSS-------------MSPARHPVRALILAPTRELADQVAESVKRYSHSSP 120
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+RV + GG+ Q L+ EL++ TPGRL + + E+ V L +S VLDEADR
Sbjct: 121 LRVAVVFGGVDMNAQRDQLRKGCELLIATPGRLLDHI---EQKNVSLSQVSVLVLDEADR 177
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
M++ G +L+ I+ +LP K RQ+L+FSAT S D
Sbjct: 178 MLDMGFLPDLERIVRLLP------------------------KPRQSLLFSAT--FSNDI 211
Query: 411 RK 412
RK
Sbjct: 212 RK 213
>gi|212540616|ref|XP_002150463.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210067762|gb|EEA21854.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 808
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 150/268 (55%), Gaps = 20/268 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E L L+ I ++G+ +PTPIQ+A IP A Q +D+IG A TGSGKT +F LP++
Sbjct: 369 SWEESGLPRRLLDLIKQVGYADPTPIQRAAIPIAL-QSRDLIGVAVTGSGKTASFLLPLL 427
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ E + +E E G A+I+ PTRELA Q+ K+ +K +N V
Sbjct: 428 VYIAEL---------PRLDEFEWRKNDGPY-AIILAPTRELAQQIEIEAKKFSKPLNFNV 477
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI+
Sbjct: 478 VSIVGGHSLEEQAYSLRDGAEIIIATPGRLVDCL---ERRMLVLSQCCYVIMDEADRMID 534
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSATI--ALSAD 409
G + I+D LP+TN + + + ++ V R+ RQT++++AT+ A+
Sbjct: 535 LGFEEPVNKILDALPVTNEKPDTEEAEDAQAMSQHVGGRDRRYRQTMMYTATMPSAVERI 594
Query: 410 FRKKLKHGSLKLKQSVNGLNSIETLSER 437
RK L+ ++ +V +++T+ +R
Sbjct: 595 ARKYLRRPAIVTIGNVG--QAVDTVEQR 620
>gi|359475106|ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 712
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 133/241 (55%), Gaps = 27/241 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
++I +W E +L L+K++ R G+K P+PIQ A IP Q +D+IG AETGSGKT
Sbjct: 285 SKIPRPMRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQ-RDVIGIAETGSGKT 343
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 344 AAFVLPMLTYI--------SRLPPMSEENEAEGPY----AVVMAPTRELAQQIEDETVKF 391
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 392 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVL 448
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSAT 403
DEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSAT
Sbjct: 449 DEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSAT 499
Query: 404 I 404
+
Sbjct: 500 M 500
>gi|302654026|ref|XP_003018826.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
gi|291182505|gb|EFE38181.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
Length = 814
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 142/307 (46%), Gaps = 72/307 (23%)
Query: 105 PGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVS 164
P D DEDG+G + E + ++ Q + EE +T S A
Sbjct: 253 PDDLASDEDGSGSESEDDDEIRKQN-----------EFFAPEEGMTESKSTSGAPA---- 297
Query: 165 EAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGK 224
++ L L +++ + +GF PTPIQ+ IP A GKD++G A TGSGK
Sbjct: 298 ---------SFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALL-GKDVVGGAVTGSGK 347
Query: 225 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHL 282
T AF +PI++RLL Y P+ R I+ PTRELA+Q +
Sbjct: 348 TGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNVA 388
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 342
++A ++ +VGG S +QE +LK RP++++ TPGR + M V+ TL
Sbjct: 389 TKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEI 446
Query: 343 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 402
VLDEADRM+E+G EL I+ +P K RQT++FSA
Sbjct: 447 LVLDEADRMLEDGFAEELNEILTTIP------------------------KSRQTMLFSA 482
Query: 403 TIALSAD 409
T+ S D
Sbjct: 483 TMTNSVD 489
>gi|336399893|ref|ZP_08580692.1| hypothetical protein HMPREF0404_02020 [Fusobacterium sp. 21_1A]
gi|336163533|gb|EGN66456.1| hypothetical protein HMPREF0404_02020 [Fusobacterium sp. 21_1A]
Length = 528
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 27/197 (13%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLDHIQAIVLTPTRELALQVAEEMNSLSISKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSIIDMLPMTN 371
G +++ I L TN
Sbjct: 166 GFVEDIEKI---LTFTN 179
>gi|396488909|ref|XP_003842973.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
gi|312219551|emb|CBX99494.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
Length = 811
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 120/238 (50%), Gaps = 48/238 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ + L +++ + +GF EPTPIQ IP A QGKD++G AETGSGKT AF +PI+
Sbjct: 281 SFQAMSLSRPILRGLAAVGFSEPTPIQNKAIPIAM-QGKDVVGGAETGSGKTAAFLIPIL 339
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINV 291
+RLL Y PK R I PTRELA+Q + ++A ++
Sbjct: 340 ERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDI 380
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ GG ST+ QE +LK RP++V+ TPGR + M VE L VLDEADRM
Sbjct: 381 TFALMAGGFSTKDQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--HLEILVLDEADRM 438
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+E G +L I+ +P K RQT++FSAT+ + D
Sbjct: 439 LEEGFESQLNEILTTIP------------------------KSRQTMLFSATMTSTVD 472
>gi|357008100|ref|ZP_09073099.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
elgii B69]
Length = 529
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 151/282 (53%), Gaps = 55/282 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++E L P ++++I +GF+E TPIQ+ IP A +G+D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSEFGLEPKVLRAITEMGFEESTPIQEKAIPIAM-EGRDLIGQAQTGTGKTAAFGIPLIN 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + E+ + ALI+ PTRELA+QV + ++++ + +R +
Sbjct: 63 KIDIKEER--------------------IVALIMCPTRELAIQVAEEIEKLGRFKGIRSL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG KQ R L+ +P++++GTPGRL + ++ + ++L + +LDEAD M++
Sbjct: 103 PIYGGQDIVKQIRALRKKPQIIIGTPGRLLDHIN---RKTIKLDDVQTVILDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++QSI+ ++P +RQT++FSAT+ L+
Sbjct: 160 GFMEDIQSILKLVP------------------------DERQTMLFSATMPINIQKLAQQ 195
Query: 410 FRKKLKHGSLKLKQSVNGL--NSIETLSERAGMRANVAIVDL 449
F +H S+ KQ L S L ER A ++D+
Sbjct: 196 FLSNPEHVSVIPKQVSAPLIDQSYIELHERQKFEALCRLIDM 237
>gi|404497424|ref|YP_006721530.1| ATP-dependent RNA helicase RhlE [Geobacter metallireducens GS-15]
gi|418066827|ref|ZP_12704184.1| DEAD/DEAH box helicase domain protein [Geobacter metallireducens
RCH3]
gi|78195025|gb|ABB32792.1| ATP-dependent RNA helicase RhlE [Geobacter metallireducens GS-15]
gi|373559816|gb|EHP86098.1| DEAD/DEAH box helicase domain protein [Geobacter metallireducens
RCH3]
Length = 451
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 120/232 (51%), Gaps = 47/232 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E LHP +M + G+ PTPIQ IP +G+D++G A+TG+GKT AF LPI+
Sbjct: 3 FKEFNLHPQVMAGVTAAGYTTPTPIQAQAIPTVM-EGRDVMGLAQTGTGKTAAFALPILH 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL + GE +G +RAL+I PTRELA Q+ D + + +R V
Sbjct: 62 RLAQ------------GE-------RGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSV 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG++ Q + LKA E+VV PGRL + M+ G ++L L VLDEAD+M +
Sbjct: 103 TVYGGVNVNPQIQKLKAGAEIVVACPGRLLDHMAQGT---IDLSHLEVLVLDEADQMFDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 406
G +L+ I+ LP KRQTL+FSAT+ +
Sbjct: 160 GFLPDLRRILKQLP------------------------PKRQTLLFSATMPI 187
>gi|420174249|ref|ZP_14680702.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM061]
gi|420193514|ref|ZP_14699365.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM023]
gi|394245183|gb|EJD90500.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM061]
gi|394259781|gb|EJE04612.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis NIHLM023]
Length = 509
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|418327507|ref|ZP_12938660.1| DEAD/DEAH box helicase [Staphylococcus epidermidis 14.1.R1.SE]
gi|418614642|ref|ZP_13177605.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU118]
gi|418632462|ref|ZP_13194893.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU128]
gi|365232865|gb|EHM73840.1| DEAD/DEAH box helicase [Staphylococcus epidermidis 14.1.R1.SE]
gi|374819532|gb|EHR83654.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU118]
gi|374832369|gb|EHR96084.1| DEAD/DEAH box helicase [Staphylococcus epidermidis VCU128]
Length = 509
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 63 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 185
>gi|344171941|emb|CCA84567.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia syzygii R24]
Length = 481
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 132/255 (51%), Gaps = 48/255 (18%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
FD + LHP +++++ G+ PTPIQ A IP G+D++GAA+TG+GKT F LP
Sbjct: 3 FDTFG---LHPDILRALAESGYTRPTPIQAAAIPVVV-AGRDVMGAAQTGTGKTAGFSLP 58
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGIN 290
I+Q LL E + +P H +RALI+TPTRELA QV D++ + K
Sbjct: 59 IIQNLLPEANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYGKYTA 105
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+R + GG+ Q L+ E++V TPGRL + + ++ V L + VLDEADR
Sbjct: 106 LRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLDEADR 162
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADF 410
M++ G +LQ II++LP RQTL+FSAT +
Sbjct: 163 MLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSPEI-- 196
Query: 411 RKKLKHGSLKLKQSV 425
KKL L+ Q++
Sbjct: 197 -KKLAASYLRHPQTI 210
>gi|142982611|sp|P0C2N8.1|DRS1_NEUCR RecName: Full=ATP-dependent RNA helicase drs-1
Length = 829
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 124/241 (51%), Gaps = 48/241 (19%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E ++ E+ L +++ + +GF +PTPIQ IP + GKD++G A TGSGKT AF +
Sbjct: 291 EMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISL-MGKDVVGGAVTGSGKTAAFVV 349
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKG 288
PI++RLL Y PK R +I+TPTRELA+Q ++A
Sbjct: 350 PILERLL-------------------YRPKKVPTTRVVILTPTRELAIQCHAVAVKLASH 390
Query: 289 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 348
+++ VGG+S + QE L+ RP++V+ TPGR + M V+ T+ VLDEA
Sbjct: 391 TDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD--TIEILVLDEA 448
Query: 349 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 408
DRM+E+G EL I+ LP K RQT++FSAT+ S
Sbjct: 449 DRMLEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSSV 484
Query: 409 D 409
D
Sbjct: 485 D 485
>gi|426201453|gb|EKV51376.1| hypothetical protein AGABI2DRAFT_114110 [Agaricus bisporus var.
bisporus H97]
Length = 754
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 123/226 (54%), Gaps = 42/226 (18%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 243
LMK++ LGF +PTPIQ + IP A GKD++G A TGSGKT AF +P+++RLL
Sbjct: 205 LMKAVTNLGFNKPTPIQASTIPVAL-LGKDVVGNAVTGSGKTAAFMIPMIERLL------ 257
Query: 244 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTE 303
EKG++A +R L++ PTRELA+Q + +++ ++R+ +VGG+S +
Sbjct: 258 ---FREKGKKA------AAIRCLVLVPTRELAVQCYEVGTKLSIHTDIRLCLVVGGLSLK 308
Query: 304 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 363
QE L++RP++V+ TPGRL + + L L V+DEADR++ G EL I
Sbjct: 309 SQEADLRSRPDIVIATPGRLIDHIRNSAS--FSLDALDILVIDEADRILSEGFSDELTEI 366
Query: 364 IDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
I P + RQT++FSAT+ S D
Sbjct: 367 IKSCP------------------------RSRQTMLFSATMTDSVD 388
>gi|417795517|ref|ZP_12442737.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21305]
gi|334270877|gb|EGL89273.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus 21305]
Length = 506
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 132/246 (53%), Gaps = 53/246 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E + G V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSCGQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQQ 195
Query: 410 FRKKLK 415
F K K
Sbjct: 196 FMKSPK 201
>gi|256088376|ref|XP_002580315.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353230183|emb|CCD76354.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 793
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 141/238 (59%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W E+ + L I ++G+ EPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 358 IPNPLRSWAEMNVADELKDVIKKVGYPEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 416
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + ++ K+ E+ E+ E+ P A+I+ PTRELA Q+ + + +
Sbjct: 417 FLIPLLNWI----QRLPKL--ERLEDTEQ-GP----YAIIMAPTRELAQQIEEETVKFGR 465
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ ++ V ++GG+S E Q L+ E+V+GTPGRL +++ E + L+ ++ VLDE
Sbjct: 466 PLGIKTVSLIGGLSREDQALKLRMGAEIVIGTPGRLNDVL---ENRYMVLNQCTYIVLDE 522
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
AD+MI+ G E+ +I+ LP+TN + + +E ++ + + K RQT++F+AT+
Sbjct: 523 ADKMIDMGFEPEVNNILTYLPVTNEKPDNEDAEDDSKLLSNFATKHKYRQTVMFTATM 580
>gi|212555986|gb|ACJ28440.1| Helicase, DEAD box [Shewanella piezotolerans WP3]
Length = 440
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 135/252 (53%), Gaps = 44/252 (17%)
Query: 155 PDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDI 214
PD A + ++ E + + ++ +L L P L+ ++ L ++ PT IQ++ IPA G D+
Sbjct: 4 PDPATQATITTVEKAPQLKSFADLGLIPELLATLDALAYQSPTAIQQSTIPAVIA-GSDV 62
Query: 215 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 274
+G A TGSGKT AF LPI+Q L + A++ ++ +LI+ PTREL
Sbjct: 63 LGGAITGSGKTAAFALPIIQLL--------------AKSAKQTRQSNYVSSLILVPTREL 108
Query: 275 ALQVTDHLKEVAKGI--NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 332
A QV D A+ I N++V+ + GG+ST Q + L+ +++V TPGRL +LMS
Sbjct: 109 AQQVADSFMRYAQNIKPNLKVLAVYGGVSTNSQMQSLRGGADILVATPGRLLDLMSS--- 165
Query: 333 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 392
+ V+L +S VLDEADRM+ G EL ++++ LP
Sbjct: 166 NAVKLDKVSSLVLDEADRMLSLGFTDELAALLEKLP------------------------ 201
Query: 393 KKRQTLVFSATI 404
K+QTL+FSAT
Sbjct: 202 AKKQTLLFSATF 213
>gi|50311527|ref|XP_455788.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660268|sp|Q6CJV1.1|DRS1_KLULA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49644924|emb|CAG98496.1| KLLA0F15752p [Kluyveromyces lactis]
Length = 748
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 124/234 (52%), Gaps = 51/234 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+N L L ++K + LG+ P+PIQ A IP A GKDII A TGSGKT AF +PI++
Sbjct: 235 FNSLSLSRPVLKGLGSLGYTSPSPIQSAAIPIALL-GKDIIAGAVTGSGKTAAFMIPIIE 293
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHL---RALIITPTRELALQVTDHLKEVAKGINV 291
RLL Y P H+ R +++TPTRELA+QV D K + K +N
Sbjct: 294 RLL-------------------YKP-AHIASTRVVVLTPTRELAIQVADVGKNIGKFVNG 333
Query: 292 RVVPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+ VGG++ +QE+ LK RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 334 LTFGLAVGGLNLRQQEQALKTRPDIVIATPGRFIDHLRNSASFSVD--SVEILVIDEADR 391
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
M+E G ELQ I+ ++P KRQTL+FSAT+
Sbjct: 392 MLEEGFQEELQEIMSLIP------------------------SKRQTLLFSATM 421
>gi|405972018|gb|EKC36815.1| Putative ATP-dependent RNA helicase DDX23 [Crassostrea gigas]
Length = 778
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 135/227 (59%), Gaps = 20/227 (8%)
Query: 183 LLMKSIYRL----GFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLE 238
LL K I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT AF P+++ +
Sbjct: 354 LLQKEILEVIEIAGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFLFPLLKWITS 412
Query: 239 EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVG 298
K+ ++ YA +I+ PTRELA Q+ + + AK +++R V I+G
Sbjct: 413 ----LPKLERFDDQDQGPYA-------IILAPTRELAQQIEEETIKFAKHLDIRTVAIIG 461
Query: 299 GMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 358
G+S E+Q L+ E+V+ TPGRL +++ ++LV L ++ V+DEADRMI+ G
Sbjct: 462 GISREEQGFKLRQGCEIVIATPGRLIDVLEN--RYLV-LAQCTYVVMDEADRMIDMGFEP 518
Query: 359 ELQSIIDMLPMTNGS-NEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++Q I++ LP++N + +E Q + S ++K RQT++F+AT+
Sbjct: 519 DVQKILEYLPVSNQKPDNDDAEDDQKMLQNFSSKKKYRQTVMFTATM 565
>gi|255941704|ref|XP_002561621.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586244|emb|CAP93992.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 815
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 122/235 (51%), Gaps = 44/235 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E L +++ + +GF +PTPIQ+ IP A GKDI+G+A TGSGKT AF +PI++
Sbjct: 306 FQEFNLSRPILRGLAAVGFTDPTPIQRKAIPVAL-LGKDIVGSAVTGSGKTAAFIVPILE 364
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RLL K P R +I+ PTRELA+Q + ++A +V
Sbjct: 365 RLLFRPRKV---------------PTS--RVVILMPTRELAVQCYNVSVKLATFTDVTFC 407
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG S +QE +LK RP++++ TPGR + M V+ TL VLDEADRM+E+
Sbjct: 408 QLVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSPSFTVD--TLEILVLDEADRMLED 465
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
G EL I+ +P K RQT++FSAT+ S D
Sbjct: 466 GFADELNEILTTIP------------------------KSRQTMLFSATMTDSID 496
>gi|403382424|ref|ZP_10924481.1| ATP-dependent RNA helicase [Paenibacillus sp. JC66]
Length = 442
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 119/215 (55%), Gaps = 49/215 (22%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEK 250
+G +PT IQ+ CIP H G D+IG A+TG+GKTLAF LPI+QRL +
Sbjct: 1 MGIVQPTEIQERCIPPLLH-GHDVIGRAQTGTGKTLAFVLPILQRLRPD----------- 48
Query: 251 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV-AKGINVRVVPIVGGMSTEKQERLL 309
+G ++ALI+ PTRELALQ+T +K+V A + RV+ + GG EKQ R L
Sbjct: 49 ---------QGEVQALIVAPTRELALQITAEIKKVTADSEDCRVLAVYGGQDVEKQMRQL 99
Query: 310 KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 369
K + +LVVGTPGRL + + G + L LS VLDEAD+M+ G E+++I+D P
Sbjct: 100 KNQVQLVVGTPGRLLDHLRRGT---LNLGRLSMLVLDEADQMLHIGFLNEVEAILDATPS 156
Query: 370 TNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+ RQT++FSAT+
Sbjct: 157 S------------------------RQTMLFSATM 167
>gi|340759001|ref|ZP_08695578.1| ATP-dependent RNA helicase [Fusobacterium varium ATCC 27725]
gi|251835856|gb|EES64394.1| ATP-dependent RNA helicase [Fusobacterium varium ATCC 27725]
Length = 527
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 110/181 (60%), Gaps = 24/181 (13%)
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 244
+K++ + G+++PTPIQ IPA KDIIG A+TG+GKT AF LPI++R
Sbjct: 17 IKALSKKGYEKPTPIQALTIPALLDGEKDIIGQAQTGTGKTAAFSLPILER--------- 67
Query: 245 KMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEK 304
+ P ++A+++ PTRELA+QV + + +A G +R+ P+ GG S E
Sbjct: 68 ------------FEPGKVVQAIVLAPTRELAIQVAEEMNSLANGKKIRITPVYGGQSIEF 115
Query: 305 QERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 364
Q R LK +++VGTPGR+ +LM ++ L++L L +F+LDEAD M+ G +++ I+
Sbjct: 116 QIRQLKKGTDIIVGTPGRVMDLM---DRKLIKLDNLKYFILDEADEMLNMGFLEDVEKIL 172
Query: 365 D 365
+
Sbjct: 173 E 173
>gi|242241488|ref|ZP_04795933.1| ATP-dependent RNA helicase [Staphylococcus epidermidis W23144]
gi|242235031|gb|EES37342.1| ATP-dependent RNA helicase [Staphylococcus epidermidis W23144]
Length = 528
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++++ +GFKEPTPIQK IP A +G DI+G A+TG+GKT AFG+P+++
Sbjct: 23 FKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL-EGDDILGQAQTGTGKTGAFGIPLIE 81
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+++ G++ +++LI+ PTRELA+QV + L+E +KG V+VV
Sbjct: 82 KVV-------------GQQG--------VQSLILAPTRELAMQVAEQLREFSKGQKVQVV 120
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 121 TVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTL---ILDEADEMMNM 177
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 178 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATM 204
>gi|258516257|ref|YP_003192479.1| DEAD/DEAH box helicase [Desulfotomaculum acetoxidans DSM 771]
gi|257779962|gb|ACV63856.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 539
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 130/231 (56%), Gaps = 49/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L+ +++++ +GF+EPTPIQ+ IP + +GKDIIG A+TG+GKT AF +P+++
Sbjct: 14 FGELTLNSRIVQALVNMGFEEPTPIQQKTIPISL-EGKDIIGQAQTGTGKTAAFAIPVLE 72
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ R ++ALIITPTRELA+QV + + + K +R +
Sbjct: 73 KIDSRRNG--------------------VQALIITPTRELAIQVAEEISNIGKYCRIRAL 112
Query: 295 PIVGGMSTEKQERLLK-ARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
PI GG S ++Q + LK R ++V+GTPGRL + + G L ++ T+ VLDEAD M++
Sbjct: 113 PIYGGQSIDRQIKALKQQRVQIVIGTPGRLLDHLRRGTLRLEQVATV---VLDEADEMLD 169
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I++ P T RQT +FSATI
Sbjct: 170 MGFIEDIEAILNQTPTT------------------------RQTFLFSATI 196
>gi|336372365|gb|EGO00704.1| hypothetical protein SERLA73DRAFT_105076 [Serpula lacrymans var.
lacrymans S7.3]
Length = 681
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 42/226 (18%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 243
++K++ +G +PTPIQ A +P A GKD++G A TGSGKT AF +PI++RLL
Sbjct: 197 IIKALTTMGLHKPTPIQAAAVPVAL-LGKDVVGGAVTGSGKTAAFTIPIIERLL------ 249
Query: 244 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTE 303
+KG+ A R L++ PTRELA+Q + +A +VR +VGG+S +
Sbjct: 250 ---YRDKGKNA------AATRCLVVVPTRELAVQCFEVGTRMAGHTDVRFCLVVGGLSLK 300
Query: 304 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 363
QE L++RP++++ TPGRL + + L L VLDEADRM+E+G EL I
Sbjct: 301 SQEAALRSRPDVLIATPGRLIDHLHNSPS--FTLDALDILVLDEADRMLEDGFADELTEI 358
Query: 364 IDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+ P++ RQT++FSAT+ S D
Sbjct: 359 VKACPVS------------------------RQTMLFSATMTDSVD 380
>gi|353237187|emb|CCA69166.1| related to DRS1-RNA helicase of the DEAD box family [Piriformospora
indica DSM 11827]
Length = 767
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 121/226 (53%), Gaps = 42/226 (18%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 243
+MKS+ L F PTPIQ A IP A GKDI+G A TGSGKT AF +PI++RLL
Sbjct: 187 IMKSLTSLSFHTPTPIQAATIPVALL-GKDIVGNAVTGSGKTAAFMIPILERLL------ 239
Query: 244 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTE 303
+KG+ A R L++ PTRELA+Q + ++A ++++ +VGG+S +
Sbjct: 240 ---YRQKGKNA------AATRCLVLVPTRELAVQCFEVGTKLAAHTDIQMSLVVGGLSLK 290
Query: 304 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 363
QE L+++P+LV+ TPGRL + + L L VLDEADRM+ +G EL+ I
Sbjct: 291 AQEATLRSKPDLVIATPGRLIDHLRNSP--TFNLDALDVLVLDEADRMLSDGFADELEEI 348
Query: 364 IDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+ P + RQT++FSAT+ S D
Sbjct: 349 VKSCP------------------------RSRQTMLFSATMTDSVD 370
>gi|312898631|ref|ZP_07758021.1| DEAD/DEAH box helicase [Megasphaera micronuciformis F0359]
gi|310620550|gb|EFQ04120.1| DEAD/DEAH box helicase [Megasphaera micronuciformis F0359]
Length = 522
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 132/233 (56%), Gaps = 46/233 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
+ + L++ +++ ++ +GF+EPTPIQ+ IP A +G D+IG A+TG+GKT A+G+P
Sbjct: 6 LEKFKNLQISDVIINALNDMGFEEPTPIQEGSIPVAL-EGHDMIGQAQTGTGKTAAYGIP 64
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
+++++L AG APK L+++I++PTRELA+QV + + +A+ V
Sbjct: 65 VLEKIL----AAG-------------APK-ELQSVILSPTRELAIQVAEEINHLAQYTPV 106
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ +PI GG E+Q R L+ P+++V TPGRL + M G V+L ++S VLDEAD M
Sbjct: 107 QALPIYGGQDMERQLRRLRKSPQIIVATPGRLIDHMKRGT---VKLSSISTIVLDEADEM 163
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+ G ++ I+ P T RQTL+FSAT+
Sbjct: 164 LNMGFIDDINLIMSATPET------------------------RQTLLFSATM 192
>gi|150863785|ref|XP_001382380.2| pre-mRNA splicing factor RNA helicase of DEAD box family
[Scheffersomyces stipitis CBS 6054]
gi|158514818|sp|A3LNL1.2|PRP28_PICST RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|149385041|gb|ABN64351.2| pre-mRNA splicing factor RNA helicase of DEAD box family
[Scheffersomyces stipitis CBS 6054]
Length = 482
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 138/244 (56%), Gaps = 25/244 (10%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIY-RLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGK 224
+I WNE + L+ I +L + EPTPIQ+A IP A +Q +D++G AETGSGK
Sbjct: 49 GDIDNPLRTWNEASIPSKLLSIIVDKLEYLEPTPIQRAAIPLALNQ-RDVVGIAETGSGK 107
Query: 225 TLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKY-APKGHLRALIITPTRELALQVTDHLK 283
TLAF +P++ +L + LE + ++ + Y P G LI+ PTRELA Q+T +
Sbjct: 108 TLAFLIPLLSYILNTDKN---YLEYEHQQEQNYNKPLG----LILAPTRELAQQITKEAQ 160
Query: 284 EVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 343
+ + + VV I+GG E+ ++ +VV TPGRL + + E++++ L +
Sbjct: 161 KFGDRLGLNVVSIIGGHQYEETVHSIRTGVHVVVATPGRLVDSL---ERNIIGLDKCYYL 217
Query: 344 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSL--QRKKRQTLVFS 401
++DEADRMI+ G + LQSI+ +P T+ N T+ S+ KKR TL+F+
Sbjct: 218 IMDEADRMIDMGFEKALQSILSYVPSTDRLNS----------TIDSMIFHIKKRITLMFT 267
Query: 402 ATIA 405
ATI+
Sbjct: 268 ATIS 271
>gi|346322626|gb|EGX92225.1| DEAD/DEAH box helicase, putative [Cordyceps militaris CM01]
Length = 744
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 17/231 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L P L+ I +G++EPTPIQ+A IP A +D+IG A TGSGKT AF LP++
Sbjct: 295 WKESGLPPRLLAIIEHVGYEEPTPIQRAAIPIALL-ARDLIGVAVTGSGKTAAFLLPLLV 353
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + L GE + P ALI+ PTREL Q+ K+ + + R V
Sbjct: 354 YISD--------LPPLGETNKNDGPY----ALILAPTRELVQQIEKEAKKFGEPLGFRCV 401
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 402 SIVGGHSLEEQAYALRNGAEIIVATPGRLVDCI---ERRLLVLSQCCYVIMDEADRMIDM 458
Query: 355 GHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G + +I+D LP++N + ++E + + + RQT++F+AT+
Sbjct: 459 GFEEPVNTILDALPVSNEKPDTDEAEDGRLMQRYVGEKDRYRQTMMFTATM 509
>gi|341882300|gb|EGT38235.1| hypothetical protein CAEBREN_08382 [Caenorhabditis brenneri]
Length = 554
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 126/243 (51%), Gaps = 48/243 (19%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
+SE ++T+ + +L + + + + + K TP+Q ACIP G DI+G A TG+
Sbjct: 72 ISEENMTTK--KFQQLGVASWITQQLQTMHIKTATPVQAACIPKIL-DGSDILGCARTGT 128
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 282
GKTLAF +PI+Q+L P G + ALI+TPTRELA Q+ D
Sbjct: 129 GKTLAFAIPILQKL-------------------SVDPYG-IFALILTPTRELAFQIADQF 168
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH-TLS 341
V K I ++ IVGG S +Q R L RP +VV TPGRL +L+ + + ++ +
Sbjct: 169 VAVGKPITLKCSVIVGGRSLIQQARELSERPHIVVATPGRLADLIESDQDVIAKVFKKIQ 228
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 401
FFVLDEADRM+E + +L+ I + +P +KRQTL+ S
Sbjct: 229 FFVLDEADRMLEGQYNDQLKPIFESIP------------------------QKRQTLLLS 264
Query: 402 ATI 404
ATI
Sbjct: 265 ATI 267
>gi|296211536|ref|XP_002752462.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Callithrix
jacchus]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|301783663|ref|XP_002927245.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Ailuropoda melanoleuca]
gi|281343724|gb|EFB19308.1| hypothetical protein PANDA_017010 [Ailuropoda melanoleuca]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|344267898|ref|XP_003405802.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Loxodonta
africana]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|312077794|ref|XP_003141459.1| RNA helicase [Loa loa]
Length = 674
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 135/232 (58%), Gaps = 16/232 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+E L + I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 302 WDEAGLPSEVFDVIMKIGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFLIPLLV 360
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + + G + + P A+I+ PTRELA Q+ + + + + +R V
Sbjct: 361 WITS-------IPKFHGNDEQDTGPY----AIIMAPTRELAQQIEEETVKFGQLLGIRTV 409
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG S E+Q L+ E+V+ TPGRL +++ E + L ++ +LDEADRM++
Sbjct: 410 SVIGGASREEQGLKLRLGVEVVIATPGRLLDVL---ENRYLSLDQCTYVILDEADRMLDM 466
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIA 405
G E+Q +++ +P+TN + + + + + + +KK RQT++F+AT++
Sbjct: 467 GFEPEVQKVLEYIPVTNLKPDTEDAEKEESIMENFFSKKKYRQTVMFTATMS 518
>gi|393905846|gb|EJD74089.1| DEAD box ATP-dependent RNA helicase [Loa loa]
Length = 757
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 135/232 (58%), Gaps = 16/232 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+E L + I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 329 WDEAGLPSEVFDVIMKIGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFLIPLLV 387
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + + G + + P A+I+ PTRELA Q+ + + + + +R V
Sbjct: 388 WIT-------SIPKFHGNDEQDTGP----YAIIMAPTRELAQQIEEETVKFGQLLGIRTV 436
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG S E+Q L+ E+V+ TPGRL +++ E + L ++ +LDEADRM++
Sbjct: 437 SVIGGASREEQGLKLRLGVEVVIATPGRLLDVL---ENRYLSLDQCTYVILDEADRMLDM 493
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIA 405
G E+Q +++ +P+TN + + + + + + +KK RQT++F+AT++
Sbjct: 494 GFEPEVQKVLEYIPVTNLKPDTEDAEKEESIMENFFSKKKYRQTVMFTATMS 545
>gi|409407327|ref|ZP_11255778.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
gi|386433078|gb|EIJ45904.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
Length = 487
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 129/243 (53%), Gaps = 47/243 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + L P ++K++ G+ PTPIQ IP QG+D++GAA+TG+GKT F LPI+Q
Sbjct: 18 FEDFGLSPDILKALSEQGYVHPTPIQAQAIPVVL-QGRDVMGAAQTGTGKTAGFSLPIIQ 76
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
RLL + +P H +RALI+TPTRELA QV +++K ++ +R
Sbjct: 77 RLL-------------AHASHSASPARHPVRALILTPTRELADQVAENVKAYSRFTPLRS 123
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG+ Q L+A E+V+ TPGRL + + ++ V L V+DEADRM++
Sbjct: 124 TVVFGGVDMAPQTATLRAGVEIVIATPGRLLDHV---QQKTVNLSQTQILVMDEADRMLD 180
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 408
G +LQ II++LP K+RQ L+FSAT + L+A
Sbjct: 181 MGFLPDLQRIINLLP------------------------KQRQNLLFSATFSPEIKKLAA 216
Query: 409 DFR 411
F+
Sbjct: 217 SFQ 219
>gi|444515387|gb|ELV10886.1| putative ATP-dependent RNA helicase DDX23 [Tupaia chinensis]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|429740488|ref|ZP_19274173.1| DEAD/DEAH box helicase [Porphyromonas catoniae F0037]
gi|429160924|gb|EKY03368.1| DEAD/DEAH box helicase [Porphyromonas catoniae F0037]
Length = 612
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 124/222 (55%), Gaps = 38/222 (17%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 243
+ +++ LG+++P P+Q+A IP + +D+I A+TG+GKT AFGLP++Q +
Sbjct: 12 ICQAVAELGYEQPMPVQEAVIPHLLGEPQDLIALAQTGTGKTAAFGLPLLQNV------- 64
Query: 244 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMST 302
+ L+E GH RAL++ PTREL LQ++D L E +K + +VR++P+ GG S
Sbjct: 65 ARSLDESKTRTNA---SGHARALVLCPTRELCLQISDDLTEYSKYLPSVRILPVYGGSSI 121
Query: 303 EKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 362
E Q R L+ E++V TPGRL +LM G L E+ T+ VLDEAD M+ G LQ+
Sbjct: 122 EAQIRTLRRGVEVIVATPGRLIDLMERGVASLDEVQTV---VLDEADEMLNMGFTESLQT 178
Query: 363 IIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
I+ +P K+R L+FSAT+
Sbjct: 179 ILAQVP------------------------KERHLLLFSATM 196
>gi|403296528|ref|XP_003939155.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Saimiri
boliviensis boliviensis]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|395841632|ref|XP_003793638.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Otolemur
garnettii]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|375007039|ref|YP_004980670.1| DEAD-box ATP-dependent RNA helicase cshA [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359285886|gb|AEV17570.1| DEAD-box ATP-dependent RNA helicase cshA [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 467
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L +MK+I R+GF+E TPIQ IP + Q KD+IG A+TG+GKT AFG+PI++
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSL-QNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ ++AL++ PTRELA+QV++ L ++ VRV+
Sbjct: 63 KV--------------------NVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG ++Q R LK P ++VGTPGR+ + ++ G L +HT+ VLDEAD M+
Sbjct: 103 PIYGGQDIDRQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTV---VLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P +RQTL+FSAT+
Sbjct: 160 GFIEDIEAILSHVP------------------------AERQTLLFSATM 185
>gi|194758757|ref|XP_001961625.1| GF15062 [Drosophila ananassae]
gi|190615322|gb|EDV30846.1| GF15062 [Drosophila ananassae]
Length = 819
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 145/238 (60%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W+E ++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKTLA
Sbjct: 386 IPNPIRSWSESGFPREIIDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + K+ E+ E+ ++ P A+I+ PTRELA Q+ + + +
Sbjct: 445 FLIPLLSWI----QSLPKI--ERLEDVDQ-GPY----AIIMAPTRELAQQIEEETTKFGQ 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 494 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N + + + + + + +KK RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEYMPVSNLKPDTEEAEDENKLMENFYTKKKYRQTVMFTATM 608
>gi|149714248|ref|XP_001504169.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 1
[Equus caballus]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|168046775|ref|XP_001775848.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672855|gb|EDQ59387.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 143/302 (47%), Gaps = 46/302 (15%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
SN A L +A+ + E + L L L+++ LG K PT +Q+ C+P G
Sbjct: 23 SNKKTAAPALLDEDAKAAKEITTFEGLGLTDWLVRACKELGMKRPTLVQQGCVPQIL-AG 81
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 271
KD+ G A+TGSGKT AF LPI+Q+L E P G + AL++TPT
Sbjct: 82 KDVFGLAQTGSGKTAAFALPILQKLAEN-------------------PYG-VFALVLTPT 121
Query: 272 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 331
RELA Q++D K + +N+R +VGGM Q + L RP +V+ TPGRL +
Sbjct: 122 RELAFQISDQFKALGSEVNLRSTVVVGGMDMTTQAKALMQRPHIVIATPGRLRDHFMNDP 181
Query: 332 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 391
+ VLDEADR+++ G EL+S+ + +P SN
Sbjct: 182 GIPDVFAKAKYLVLDEADRLMDVGFESELRSVFETMP----SN----------------- 220
Query: 392 RKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMR-ANVAIVDLT 450
RQTL+FSAT+ + L Q G ++E L ++ + ANV V L
Sbjct: 221 ---RQTLLFSATMTSNLKALHDLSLDKAFFYQQYEGFKTVEALQQQYILTPANVKDVYLM 277
Query: 451 NV 452
++
Sbjct: 278 HI 279
>gi|291389065|ref|XP_002711079.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Oryctolagus
cuniculus]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|403746506|ref|ZP_10955039.1| DEAD/DEAH box helicase domain-containing protein [Alicyclobacillus
hesperidum URH17-3-68]
gi|403120837|gb|EJY55191.1| DEAD/DEAH box helicase domain-containing protein [Alicyclobacillus
hesperidum URH17-3-68]
Length = 524
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 131/247 (53%), Gaps = 54/247 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E LH ++++I+ +GF+ P+PIQ ACIP +G D+IG A+TG+GKT AFG+P++
Sbjct: 2 FEEFGLHRRVLQAIHDMGFEAPSPIQAACIPIVM-EGVDVIGQAQTGTGKTAAFGIPLV- 59
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E P H++A+++TPTRELA+QV ++++AK VR V
Sbjct: 60 --------------------EMMTPDPHVQAIVLTPTRELAIQVAGEIRKIAKYKRVRSV 99
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG S Q R LK +V+GTPGR+ + + G ++L + VLDEAD M++
Sbjct: 100 PIYGGQSIGHQIRALKQGVHIVIGTPGRVLDHIRRGT---LQLGQVRMVVLDEADEMLDM 156
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++++I+ P ++RQTL+FSAT LS
Sbjct: 157 GFIDDIEAILRETP------------------------EERQTLLFSATFPSEVKRLSGR 192
Query: 410 FRKKLKH 416
+ + +H
Sbjct: 193 YMRDPRH 199
>gi|260941344|ref|XP_002614838.1| hypothetical protein CLUG_04853 [Clavispora lusitaniae ATCC 42720]
gi|238851261|gb|EEQ40725.1| hypothetical protein CLUG_04853 [Clavispora lusitaniae ATCC 42720]
Length = 748
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 131/255 (51%), Gaps = 46/255 (18%)
Query: 153 NGPDDAEE--ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQ 210
N D AE E +AE ++ L L ++K + LG+ +P+PIQ A IP A
Sbjct: 214 NDEDSAEAIAEFYEKAESDQAHKSFQSLDLARPVLKGLASLGYTKPSPIQSASIPIAL-L 272
Query: 211 GKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITP 270
GKDI+ A TGSGKT A+ +PI++RLL + K R +I+TP
Sbjct: 273 GKDIVAGAVTGSGKTAAYMIPIIERLLYKSSKVAST-----------------RVVILTP 315
Query: 271 TRELALQVTDHLKEVAKGINVRVVPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSG 329
TRELA+QV D K++ + +N + VGG++ +QE+ LK RP++VV TPGRL + +
Sbjct: 316 TRELAIQVCDVGKKIGRYVNNLTFGLAVGGLNLRQQEQQLKTRPDIVVATPGRLIDHIRN 375
Query: 330 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS 389
L L V+DEADRM+E G EL I+ ++P
Sbjct: 376 SASF--SLDALEILVMDEADRMLEEGFQVELTEILTLIP--------------------- 412
Query: 390 LQRKKRQTLVFSATI 404
+ KRQT++FSAT+
Sbjct: 413 --KHKRQTMLFSATM 425
>gi|88801632|ref|ZP_01117160.1| putative ATP-dependent RNA helicase [Polaribacter irgensii 23-P]
gi|88782290|gb|EAR13467.1| putative ATP-dependent RNA helicase [Polaribacter irgensii 23-P]
Length = 432
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 137/251 (54%), Gaps = 47/251 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L P L+K++ G+ +P+PIQ+ IP +GKDI+ +A+TG+GKT F LP++Q
Sbjct: 3 FKDLGLSPALVKAVEEKGYTKPSPIQEKAIPHIL-EGKDILASAQTGTGKTAGFTLPVLQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L+E + KY P LRAL++TPTRELA QV D+++E +K ++++
Sbjct: 62 YLVETKH-------------PKYRP---LRALVLTPTRELAAQVHDNVREYSKYVDIKST 105
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG++ + Q L++ +++V TPGRL +L ++ + + +LDEADRM++
Sbjct: 106 VVFGGVNAKPQIATLRSGVDILVATPGRLLDLH---DQKALSFKRVEVLILDEADRMLDM 162
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
G R++ II +P KRQ L+FSAT S D KKL
Sbjct: 163 GFVRDINKIISFMPA------------------------KRQNLMFSAT--FSNDI-KKL 195
Query: 415 KHGSLKLKQSV 425
G L+ SV
Sbjct: 196 ASGILRDPVSV 206
>gi|156121051|ref|NP_001095672.1| probable ATP-dependent RNA helicase DDX23 [Bos taurus]
gi|151554096|gb|AAI47903.1| DDX23 protein [Bos taurus]
gi|296487810|tpg|DAA29923.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Bos taurus]
gi|440905541|gb|ELR55911.1| Putative ATP-dependent RNA helicase DDX23 [Bos grunniens mutus]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|355683257|gb|AER97065.1| DEAD box polypeptide 23 [Mustela putorius furo]
Length = 818
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 443
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 444 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 492
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 493 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 549
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 550 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 608
>gi|256088378|ref|XP_002580316.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353230182|emb|CCD76353.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 730
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 141/238 (59%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W E+ + L I ++G+ EPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 295 IPNPLRSWAEMNVADELKDVIKKVGYPEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 353
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + ++ K+ E+ E+ E+ P A+I+ PTRELA Q+ + + +
Sbjct: 354 FLIPLLNWI----QRLPKL--ERLEDTEQ-GPY----AIIMAPTRELAQQIEEETVKFGR 402
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ ++ V ++GG+S E Q L+ E+V+GTPGRL +++ E + L+ ++ VLDE
Sbjct: 403 PLGIKTVSLIGGLSREDQALKLRMGAEIVIGTPGRLNDVL---ENRYMVLNQCTYIVLDE 459
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
AD+MI+ G E+ +I+ LP+TN + + +E ++ + + K RQT++F+AT+
Sbjct: 460 ADKMIDMGFEPEVNNILTYLPVTNEKPDNEDAEDDSKLLSNFATKHKYRQTVMFTATM 517
>gi|332206915|ref|XP_003252542.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX23 [Nomascus leucogenys]
Length = 778
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|404368270|ref|ZP_10973627.1| hypothetical protein FUAG_02434 [Fusobacterium ulcerans ATCC 49185]
gi|313690084|gb|EFS26919.1| hypothetical protein FUAG_02434 [Fusobacterium ulcerans ATCC 49185]
Length = 527
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 110/181 (60%), Gaps = 24/181 (13%)
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 244
+K++ + G+++PTPIQ IPA KDIIG A+TG+GKT AF LPI++R
Sbjct: 17 IKALSKKGYEKPTPIQALTIPALLDGEKDIIGQAQTGTGKTAAFSLPILER--------- 67
Query: 245 KMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEK 304
+ P ++A+++ PTRELA+QV + + +A G +R+ P+ GG S E
Sbjct: 68 ------------FEPGKVVQAIVLAPTRELAIQVAEEMNSLANGKKIRITPVYGGQSIEF 115
Query: 305 QERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 364
Q R LK +++VGTPGR+ +LM ++ L++L L +F+LDEAD M+ G +++ I+
Sbjct: 116 QIRQLKKGTDIIVGTPGRVMDLM---DRKLIKLDNLKYFILDEADEMLNMGFLEDVEKIL 172
Query: 365 D 365
+
Sbjct: 173 E 173
>gi|386780941|ref|NP_001247801.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|380785261|gb|AFE64506.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|383409609|gb|AFH28018.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|384941744|gb|AFI34477.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|41054055|ref|NP_956176.1| probable ATP-dependent RNA helicase DDX23 [Danio rerio]
gi|38014376|gb|AAH60524.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Danio rerio]
Length = 807
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 133/232 (57%), Gaps = 17/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L P +++ I + G+K+PTPIQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 380 WKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFLIPLLV 438
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K ++ E P A+I+ PTRELA Q+ + + K + +R V
Sbjct: 439 -WITTLPKIDRI------EDSDQGPY----AIILAPTRELAQQIEEETIKFGKPLGIRTV 487
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 488 AVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDEADRMIDM 544
Query: 355 GHFRELQSIIDMLPMTNG--SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN + + + S + K RQT++F+AT+
Sbjct: 545 GFEPDVQKILEYIPVTNQKPDTDDAEDPEKMMQNFESGKHKYRQTVMFTATM 596
>gi|328869268|gb|EGG17646.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 860
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 126/241 (52%), Gaps = 48/241 (19%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
E+ + + EL L L K++ +LG+ +PTPIQ IP + GKDI+ +A TGSGKT
Sbjct: 228 EVVMDLPTFEELHLSRPLQKAVAKLGYTQPTPIQAKAIPLILN-GKDILASATTGSGKTA 286
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKE 284
AF LPI++RLL Y H R LI+ PTRELALQ +
Sbjct: 287 AFILPILERLL-------------------YRDATHRVSRVLIVLPTRELALQCHSVFES 327
Query: 285 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
+A+ NV+ +VGG+S + QE L+ RP++++ TPGRL + + H V L + V
Sbjct: 328 LAQFTNVQSCLVVGGLSNKVQEHELRKRPDVIIATPGRLIDHLLNA--HDVGLEDIEILV 385
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
LDEADR+++ G EL +++ P +G RQTL+FSAT+
Sbjct: 386 LDEADRLLDMGFKDELNRVVESCP--DG----------------------RQTLLFSATL 421
Query: 405 A 405
+
Sbjct: 422 S 422
>gi|73996608|ref|XP_851051.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2
[Canis lupus familiaris]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|410964263|ref|XP_003988675.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Felis catus]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|336469774|gb|EGO57936.1| hypothetical protein NEUTE1DRAFT_81992 [Neurospora tetrasperma FGSC
2508]
Length = 830
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 124/241 (51%), Gaps = 48/241 (19%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E ++ E+ L +++ + +GF +PTPIQ IP + GKD++G A TGSGKT AF +
Sbjct: 292 EMASFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISL-MGKDVVGGAVTGSGKTAAFVV 350
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKG 288
PI++RLL Y PK R +I+TPTRELA+Q ++A
Sbjct: 351 PILERLL-------------------YRPKKVPTTRVVILTPTRELAIQCHAVAVKLASH 391
Query: 289 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 348
+++ VGG+S + QE L+ RP++V+ TPGR + M V+ T+ VLDEA
Sbjct: 392 TDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD--TIEILVLDEA 449
Query: 349 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 408
DRM+E+G EL I+ LP K RQT++FSAT+ S
Sbjct: 450 DRMLEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSSV 485
Query: 409 D 409
D
Sbjct: 486 D 486
>gi|169853351|ref|XP_001833356.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coprinopsis
cinerea okayama7#130]
gi|116505566|gb|EAU88461.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coprinopsis
cinerea okayama7#130]
Length = 748
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 143/262 (54%), Gaps = 19/262 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E + +++ I R+G+KEP+PIQ+ IP Q +D+IG AETGSGKT AF +P++
Sbjct: 322 SWEESDIPQVILDCIERIGYKEPSPIQRQAIPIGL-QNRDVIGIAETGSGKTAAFVIPML 380
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+L L ++ P ALI+ PTRELA Q+ K+ A + +
Sbjct: 381 AFIL--------TLPIFTDDNRHLGPY----ALILAPTRELAQQIESETKKFATPLGYKC 428
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG + E+Q+ L+ E+++ TPGRL +++ E+H++ L + V+DEADRM+
Sbjct: 429 VSIVGGRAVEEQQFNLREGAEIIIATPGRLKDVL---ERHVLVLSQCRYIVMDEADRMVN 485
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSADFR 411
G +L I+D LP E Q E+ + + R T +FSAT+ A+ R
Sbjct: 486 LGFEADLTFILDQLPTDTMEGEEQGEKMDVDGETMVKKGRTRVTTLFSATMPPAVERLAR 545
Query: 412 KKLKH-GSLKLKQSVNGLNSIE 432
K LK ++ + ++ ++++E
Sbjct: 546 KYLKKPATITIGEAGRAVDTVE 567
>gi|41327771|ref|NP_004809.2| probable ATP-dependent RNA helicase DDX23 [Homo sapiens]
gi|397510970|ref|XP_003825856.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Pan paniscus]
gi|160385708|sp|Q9BUQ8.3|DDX23_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=100 kDa U5 snRNP-specific protein; AltName:
Full=DEAD box protein 23; AltName: Full=PRP28 homolog;
AltName: Full=U5-100kD
gi|12803125|gb|AAH02366.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapiens]
gi|119578415|gb|EAW58011.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|119578419|gb|EAW58015.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|123981044|gb|ABM82351.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|123995847|gb|ABM85525.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|189065458|dbj|BAG35297.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|392531372|ref|ZP_10278509.1| ATP-dependent RNA helicase; cold shock [Carnobacterium
maltaromaticum ATCC 35586]
gi|414082690|ref|YP_006991393.1| DEAD/DEAH box helicase [Carnobacterium maltaromaticum LMA28]
gi|412996269|emb|CCO10078.1| DEAD/DEAH box helicase family protein [Carnobacterium
maltaromaticum LMA28]
Length = 541
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 127/231 (54%), Gaps = 50/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL L P L++S+ RLGF+E TPIQ+ IP A +GKD+IG A+TG+GKT AFGLP++Q
Sbjct: 3 FSELGLDPELLQSVERLGFEEATPIQEQTIPLAL-EGKDVIGQAQTGTGKTAAFGLPMLQ 61
Query: 235 RL-LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
++ L+ R G L+I PTRELA+Q + L +++ VRV
Sbjct: 62 KIDLKNRAVQG---------------------LVIAPTRELAIQTQEELFRLSRDKKVRV 100
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG +Q R LK +P +VVGTPGRL + ++ + ++L + VLDEAD M+
Sbjct: 101 QVVYGGADISRQIRSLKDQPHIVVGTPGRLLDHIN---RRTLKLDQVETLVLDEADEMLN 157
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II +P K RQTL+FSAT+
Sbjct: 158 MGFLEDIEKIIKEVP------------------------KTRQTLLFSATM 184
>gi|350290558|gb|EGZ71772.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 865
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 124/241 (51%), Gaps = 48/241 (19%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E ++ E+ L +++ + +GF +PTPIQ IP + GKD++G A TGSGKT AF +
Sbjct: 292 EMASFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISL-MGKDVVGGAVTGSGKTAAFVV 350
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKG 288
PI++RLL Y PK R +I+TPTRELA+Q ++A
Sbjct: 351 PILERLL-------------------YRPKKVPTTRVVILTPTRELAIQCHAVAVKLASH 391
Query: 289 INVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 348
+++ VGG+S + QE L+ RP++V+ TPGR + M V+ T+ VLDEA
Sbjct: 392 TDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD--TIEILVLDEA 449
Query: 349 DRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSA 408
DRM+E+G EL I+ LP K RQT++FSAT+ S
Sbjct: 450 DRMLEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSSV 485
Query: 409 D 409
D
Sbjct: 486 D 486
>gi|337752121|ref|YP_004646283.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus KNP414]
gi|336303310|gb|AEI46413.1| DEAD/DEAH box helicase domain protein [Paenibacillus mucilaginosus
KNP414]
Length = 422
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 129/232 (55%), Gaps = 46/232 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L P ++K++ + + +PTPIQ+ IP G+D+ G A+TG+GKT AF LPI+Q
Sbjct: 3 FQQLELIPPIIKALAKENYTQPTPIQEQAIPPVL-AGRDLFGCAQTGTGKTAAFLLPIIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGINVR 292
L ++ + P G +R+LI+TPTRELA+Q++D+ K N+R
Sbjct: 62 LLSTQQGR----------------PNGKRVIRSLILTPTRELAIQISDNAKAYGCFTNLR 105
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
IVGG+S QE+LL+ ++++ TPGRL +LM+ G V+L + VLDEADRM+
Sbjct: 106 YGVIVGGVSQRPQEQLLEQGMDILIATPGRLIDLMNQG---FVDLSHVQILVLDEADRML 162
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+ G +++ II LP+ KRQTL FSAT+
Sbjct: 163 DMGFIHDMKRIIAKLPV------------------------KRQTLFFSATM 190
>gi|158259303|dbj|BAF85610.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|357495749|ref|XP_003618163.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493178|gb|AES74381.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 666
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 133/239 (55%), Gaps = 23/239 (9%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
++I +W E +L ++K++ + G+K P+PIQ A IP Q +D+IG AETGSGKT
Sbjct: 241 SKIPRPIRSWVESKLSQEILKAVEKAGYKTPSPIQMASIPLGLQQ-RDVIGVAETGSGKT 299
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 300 AAFVLPMLSYITR--------LPPISEENEAEGPY----AVVMAPTRELAQQIEDETVKF 347
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 348 AQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCL---ERRYAVLNQCNYVVL 404
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADRMI+ G ++ ++D +P +N E + E+ +R R T +FSAT+
Sbjct: 405 DEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDE-------KRIYRTTYMFSATM 456
>gi|354497364|ref|XP_003510790.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Cricetulus griseus]
gi|344254301|gb|EGW10405.1| putative ATP-dependent RNA helicase DDX23 [Cricetulus griseus]
Length = 819
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 443
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 444 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 492
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 493 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 549
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 550 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 608
>gi|114644988|ref|XP_509035.2| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2 [Pan
troglodytes]
gi|410219876|gb|JAA07157.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410251880|gb|JAA13907.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410291824|gb|JAA24512.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410334543|gb|JAA36218.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|323490564|ref|ZP_08095770.1| ATP-dependent RNA helicase exp9 [Planococcus donghaensis MPA1U2]
gi|323395830|gb|EGA88670.1| ATP-dependent RNA helicase exp9 [Planococcus donghaensis MPA1U2]
Length = 506
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 129/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL + +KS+ R+GF+E TPIQ+ I +GKDIIG A+TG+GKT AFG+P+++
Sbjct: 4 FSELNISETTLKSVKRMGFEEATPIQEGTI-RLGMEGKDIIGQAQTGTGKTTAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ G+++ LII PTRELA+QV++ L + + NVR++
Sbjct: 63 KI--------------------DTKDGNVQGLIIAPTRELAIQVSEELYRLGQDKNVRIL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP+++VGTPGRL + ++ + ++L ++ +LDEAD M+
Sbjct: 103 SVYGGQEISRQIRALKNRPQIIVGTPGRLLDHIN---RRTLKLDNVNTLILDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q+I+ +P T RQTL+FSAT+
Sbjct: 160 GFIEDIQTIMASVPDT------------------------RQTLLFSATM 185
>gi|315043240|ref|XP_003170996.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
gi|311344785|gb|EFR03988.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
Length = 814
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 130/255 (50%), Gaps = 49/255 (19%)
Query: 158 AEEELVSEAEISTEFDA-WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIG 216
A EE V+E + ++ A + L L +++ + +GF PTPIQK IP A GKD++G
Sbjct: 283 APEEQVAEPKSASGAPASFQNLSLSRPILRGLASVGFSAPTPIQKKTIPVALL-GKDVVG 341
Query: 217 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTREL 274
A TGSGKT AF +PI++RLL Y P+ R I+ PTREL
Sbjct: 342 GAVTGSGKTGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTREL 382
Query: 275 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 334
A+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M
Sbjct: 383 AVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFT 442
Query: 335 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 394
V+ TL VLDEADRM+E+G EL I+ +P K
Sbjct: 443 VD--TLEILVLDEADRMLEDGFAEELNEILTTIP------------------------KS 476
Query: 395 RQTLVFSATIALSAD 409
RQT++FSAT+ S D
Sbjct: 477 RQTMLFSATMTNSVD 491
>gi|431901383|gb|ELK08409.1| Putative ATP-dependent RNA helicase DDX23 [Pteropus alecto]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|261337192|ref|NP_001100263.2| probable ATP-dependent RNA helicase DDX23 [Rattus norvegicus]
gi|149032134|gb|EDL87046.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 819
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 443
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 444 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 492
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 493 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 549
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 550 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 608
>gi|417404803|gb|JAA49138.1| Putative rna helicase [Desmodus rotundus]
Length = 818
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 384 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 442
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 443 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 491
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 492 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 548
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 549 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 607
>gi|395334307|gb|EJF66683.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 773
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 127/244 (52%), Gaps = 45/244 (18%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
+E T F + N L ++KS+ LGF PTPIQ A IP A GKD++G A TGSGKT
Sbjct: 183 SEAHTSFLSMN---LSRPIIKSLTTLGFTTPTPIQAATIPVAL-LGKDVVGNAVTGSGKT 238
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF +P+++RL M ++G++A R L++ PTREL +Q + ++
Sbjct: 239 AAFIIPMLERL---------MYRDRGKKA------AATRCLVLVPTRELGVQCFEVGTKL 283
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A ++R +VGG+S + QE L+ RP++V+ TPGRL + + L L VL
Sbjct: 284 AAHTDIRFALVVGGLSIKAQEANLRTRPDVVIATPGRLIDHIRNSP--TFTLDALDILVL 341
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
DEADRM+E+G EL II P + RQT++FSAT+
Sbjct: 342 DEADRMLEDGFADELTEIIKSCPTS------------------------RQTMLFSATMT 377
Query: 406 LSAD 409
S D
Sbjct: 378 DSVD 381
>gi|456753028|gb|JAA74080.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Sus scrofa]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|367006707|ref|XP_003688084.1| hypothetical protein TPHA_0M00750 [Tetrapisispora phaffii CBS 4417]
gi|357526391|emb|CCE65650.1| hypothetical protein TPHA_0M00750 [Tetrapisispora phaffii CBS 4417]
Length = 762
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 151/285 (52%), Gaps = 44/285 (15%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEK 250
L F +PT IQ IP A +G+DI+G A TGSGKTLA+G+PI++ LL +
Sbjct: 205 LAFTKPTEIQMKAIPHAL-KGEDIMGKASTGSGKTLAYGIPILENLL------------R 251
Query: 251 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI----NVRVVPIVGGMSTEKQE 306
+ + P ALI TPTRELA QVT HL++++K I ++ + GG+S +KQ+
Sbjct: 252 TAKVDANKP----IALIFTPTRELAQQVTQHLQKISKLIIEKNPYSILSLTGGLSIQKQQ 307
Query: 307 RLLKARPE--LVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 364
RLLK + +VV TPGR EL+ + + VLDEADR++++GHF E ++I+
Sbjct: 308 RLLKYKGSGRVVVATPGRFLELLEKDNTLIDRFAKIDTLVLDEADRLLQDGHFDEFENIL 367
Query: 365 DMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSL---KL 421
L N EG + K QT++FSAT S D KL + KL
Sbjct: 368 KHLNNANKKMEGTA---------------KWQTMIFSAT--FSIDLFDKLASSNWKNKKL 410
Query: 422 KQSVNGLNSI-ETLSERAGMRANVAIVDLTNVSVLANKLEESFIE 465
++ + +N + + L + ++ I+D ++ +++E+ IE
Sbjct: 411 DENESEMNVVLKHLMNKIQFKSKPVIIDTNPEQKVSEQVKEALIE 455
>gi|421871323|ref|ZP_16302945.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
gi|372459950|emb|CCF12494.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
Length = 506
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 126/230 (54%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NEL L P +++SI +GF+E TPIQ IP A G+D+IG A+TG+GKT+AFG+P+++
Sbjct: 4 FNELGLSPSVLRSISNMGFEEATPIQALTIPVAL-TGRDLIGQAQTGTGKTVAFGIPMIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ H++ +++ PTRELA+QV++ L ++ + ++ +
Sbjct: 63 KI--------------------DTSSNHIQGIVLAPTRELAVQVSEELIKLGQYTGIKTL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK P ++V TPGRL + ++ + + L + VLDEAD M+
Sbjct: 103 PIYGGQDIMRQIRALKKNPHVIVATPGRLIDHIN---RRTIRLQNIQTLVLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E++SI++ +P +RQTL+FSAT+
Sbjct: 160 GFIEEIESILEQIP------------------------DERQTLLFSATM 185
>gi|341902886|gb|EGT58821.1| hypothetical protein CAEBREN_15104 [Caenorhabditis brenneri]
Length = 554
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 126/243 (51%), Gaps = 48/243 (19%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
+SE ++T+ + +L + + + + + K TP+Q ACIP G DI+G A TG+
Sbjct: 74 ISEENMTTK--KFQQLGVASWITQQLQTMHIKTATPVQAACIPKIL-DGSDILGCARTGT 130
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 282
GKTLAF +PI+Q+L P G + ALI+TPTRELA Q+ D
Sbjct: 131 GKTLAFAIPILQKL-------------------SVDPYG-IFALILTPTRELAFQIADQF 170
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH-TLS 341
V K I ++ IVGG S +Q R L RP +VV TPGRL +L+ + + ++ +
Sbjct: 171 VAVGKPITLKCSVIVGGRSLIQQARELSERPHIVVATPGRLADLIESDQDVIAKVFKKIQ 230
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 401
FFVLDEADRM+E + +L+ I + +P +KRQTL+ S
Sbjct: 231 FFVLDEADRMLEGQYNDQLKPIFESIP------------------------QKRQTLLLS 266
Query: 402 ATI 404
ATI
Sbjct: 267 ATI 269
>gi|196250549|ref|ZP_03149239.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. G11MC16]
gi|196209898|gb|EDY04667.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. G11MC16]
Length = 467
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 127/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L +MK+I R+GF+E TPIQ IP + Q KD+IG A+TG+GKT AFG+PI++
Sbjct: 4 FQELGLSKEVMKAIERMGFEETTPIQAKTIPLSL-QNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ G ++AL++ PTRELA+QV++ L ++ VRV+
Sbjct: 63 KV--------------------DVKNGAIQALVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG E+Q R LK P ++VGTPGR+ + ++ G L + T+ VLDEAD M+
Sbjct: 103 PIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVRTV---VLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P +RQTL+FSAT+
Sbjct: 160 GFIEDIEAILRHVP------------------------TERQTLLFSATM 185
>gi|296808427|ref|XP_002844552.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
gi|238844035|gb|EEQ33697.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
Length = 807
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 121/238 (50%), Gaps = 48/238 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ L L +++ + +GF PTPIQ+ IP A GKD++G A TGSGKT AF +PI+
Sbjct: 294 SFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALL-GKDVVGGAVTGSGKTAAFIVPIL 352
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINV 291
+RLL Y P+ R I+ PTRELA+Q + ++A ++
Sbjct: 353 ERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNVATKLATFTDI 393
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+VGG S +QE +LK RP++++ TPGR + M V+ TL +LDEADRM
Sbjct: 394 TFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILILDEADRM 451
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+E+G EL I+ +P K RQT++FSAT+ S D
Sbjct: 452 LEDGFAEELNEILTTIP------------------------KSRQTMLFSATMTSSVD 485
>gi|169598332|ref|XP_001792589.1| hypothetical protein SNOG_01967 [Phaeosphaeria nodorum SN15]
gi|118595361|sp|Q0V1Z7.1|DRS1_PHANO RecName: Full=ATP-dependent RNA helicase DRS1
gi|111069059|gb|EAT90179.1| hypothetical protein SNOG_01967 [Phaeosphaeria nodorum SN15]
Length = 808
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 120/238 (50%), Gaps = 48/238 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ + L + K + +GF EPTPIQ IP A QGKD++G AETGSGKT AF +PI+
Sbjct: 286 SFHAMSLSRPIQKGLAAIGFTEPTPIQAKAIPIAM-QGKDVVGGAETGSGKTAAFLIPIL 344
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINV 291
+RLL Y PK R I PTRELA+Q + ++A ++
Sbjct: 345 ERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDI 385
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ GG S+ +QE +LK RP++V+ TPGR + M VE L VLDEADRM
Sbjct: 386 TFALLAGGFSSREQEVMLKTRPDVVIATPGRFIDHMHNTAAFQVE--HLEILVLDEADRM 443
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+E G +L I+ +P K RQT++FSAT+ + D
Sbjct: 444 LEEGFETQLNEILTTIP------------------------KSRQTMLFSATMTSTVD 477
>gi|238484285|ref|XP_002373381.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|317140428|ref|XP_001818181.2| ATP-dependent RNA helicase drs1 [Aspergillus oryzae RIB40]
gi|91206589|sp|Q2UQI6.2|DRS1_ASPOR RecName: Full=ATP-dependent RNA helicase drs1
gi|220701431|gb|EED57769.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|391871961|gb|EIT81110.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 131/257 (50%), Gaps = 53/257 (20%)
Query: 158 AEEELVSE---AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDI 214
A EE SE AE+S + ++ E L +++ + + F PTPIQ+ IP A GKDI
Sbjct: 286 APEEQTSEQSAAELSKK--SFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALL-GKDI 342
Query: 215 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTR 272
+G+A TGSGKT AF +PI++RLL + P+ R I+ PTR
Sbjct: 343 VGSAVTGSGKTAAFVVPILERLL-------------------FRPRKVPTSRVAILMPTR 383
Query: 273 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 332
ELA+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M
Sbjct: 384 ELAVQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSAS 443
Query: 333 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 392
V+ TL VLDEADRM+E+G EL I+ +P
Sbjct: 444 FTVD--TLEILVLDEADRMLEDGFADELNEILTTIP------------------------ 477
Query: 393 KKRQTLVFSATIALSAD 409
K RQT++FSAT+ S D
Sbjct: 478 KSRQTMLFSATMTDSVD 494
>gi|336465424|gb|EGO53664.1| hypothetical protein NEUTE1DRAFT_133987 [Neurospora tetrasperma
FGSC 2508]
gi|350295288|gb|EGZ76265.1| Pre-mRNA-splicing ATP-dependent RNA helicase prp-28 [Neurospora
tetrasperma FGSC 2509]
Length = 728
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 143/286 (50%), Gaps = 27/286 (9%)
Query: 120 EQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELR 179
EQ KNL +KK + K + + +E+ ++ I +W E
Sbjct: 250 EQRKNLGKHWSEKKLEDMKERDWRIFKENFGIA----------TKGGAIPNPMRSWEEST 299
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEE 239
L L+ + +G+ EPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++ + E
Sbjct: 300 LPRRLLDIVKNVGYDEPTPIQRAAIPIAL-QARDLIGVAVTGSGKTAAFLLPLLVYISE- 357
Query: 240 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGG 299
L E + P ALI+ PTREL Q+ K+ A + VV IVGG
Sbjct: 358 -------LPPLTEYNKNDGPY----ALILAPTRELVQQIESEAKKFATPLGFTVVSIVGG 406
Query: 300 MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 359
S E+Q L+ E++V TPGRL + + E+ L+ + ++DEADRMI+ G
Sbjct: 407 HSLEEQAFALRNGAEIIVATPGRLVDCL---ERRLLVFSQCCYTIMDEADRMIDQGFEEP 463
Query: 360 LQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
L I+D +P+TN + +E Q + + RQT++++AT+
Sbjct: 464 LTKILDAMPVTNEKPDTDDAENPQLMSRYVDGKDRYRQTMMYTATM 509
>gi|2655202|gb|AAB87902.1| U5 snRNP 100 kD protein [Homo sapiens]
Length = 820
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|389818136|ref|ZP_10208577.1| ATP-dependent RNA helicase exp9 [Planococcus antarcticus DSM 14505]
gi|388464068|gb|EIM06404.1| ATP-dependent RNA helicase exp9 [Planococcus antarcticus DSM 14505]
Length = 507
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 129/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL + +KS+ R+GF+E TPIQ+ I +GKDIIG A+TG+GKT AFG+P+++
Sbjct: 4 FSELNISETTLKSVKRMGFEEATPIQEGTI-RLGMEGKDIIGQAQTGTGKTTAFGIPLIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ G+++ LII PTRELA+QV++ L + + NVR++
Sbjct: 63 KI--------------------DTKDGNVQGLIIAPTRELAIQVSEELYRLGQDKNVRIL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP+++VGTPGRL + ++ + ++L ++ +LDEAD M+
Sbjct: 103 SVYGGQEISRQIRALKNRPQIIVGTPGRLLDHIN---RRTLKLDNVNTLILDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q+I+ +P T RQTL+FSAT+
Sbjct: 160 GFIEDIQTIMASVPDT------------------------RQTLLFSATM 185
>gi|307167913|gb|EFN61290.1| Probable ATP-dependent RNA helicase DDX49 [Camponotus floridanus]
Length = 457
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 127/245 (51%), Gaps = 49/245 (20%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E +++L+L+ L+ +G K PT IQ+ CIP G+D IG A+TGSGKTLAF L
Sbjct: 3 EIKDFSDLKLNSWLLAQCDTMGLKNPTLIQQNCIPRIL-AGEDCIGCAKTGSGKTLAFAL 61
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
PI+Q+L E+ P G + AL++TPTRELA Q+ D + K IN
Sbjct: 62 PILQKLCED-------------------PYG-IFALVLTPTRELAFQIADQFAAIGKAIN 101
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
++ +VGGM Q L RP +VV TPGRL + + + L + F VLDEADR
Sbjct: 102 LKKCVVVGGMDMMVQGLELSKRPHIVVATPGRLADHLDSCDTF--SLQKIKFLVLDEADR 159
Query: 351 MIENGHF-RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
++ GHF ++L+ I +P K++Q L+FSAT+ + D
Sbjct: 160 LL-GGHFDKQLKKIFAAVP------------------------KQKQVLLFSATMTDALD 194
Query: 410 FRKKL 414
K++
Sbjct: 195 KVKQI 199
>gi|313900312|ref|ZP_07833806.1| ATP-dependent RNA helicase RhlE [Clostridium sp. HGF2]
gi|312954861|gb|EFR36535.1| ATP-dependent RNA helicase RhlE [Clostridium sp. HGF2]
Length = 437
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 129/230 (56%), Gaps = 47/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ L + ++K++ G+ +PTPIQ+ IP A QG+DI+G A+TG+GKT AF +P +Q
Sbjct: 3 FQTLHITEPILKAVKEQGYVDPTPIQEQAIPYAL-QGRDILGCAQTGTGKTAAFSIPTIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
LL++ K +R+LI+TPTRELA+Q+ +++ A+ +R
Sbjct: 62 -LLKKHYKQS------------------IRSLIVTPTRELAIQIQENITAYAQYTTIRSA 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + QER+LKA +++V TPGRL +L+ G ++++ + F+LDEADRM++
Sbjct: 103 VIFGGVPQKPQERILKAGVDILVATPGRLNDLIQQG---IIDISHIEIFILDEADRMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II LP K++QTL FSAT+
Sbjct: 160 GFLPDVKRIIAKLP------------------------KRKQTLFFSATM 185
>gi|193785886|dbj|BAG54673.1| unnamed protein product [Homo sapiens]
Length = 800
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 366 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 424
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 425 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 473
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 474 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 530
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 531 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 589
>gi|85113073|ref|XP_964459.1| hypothetical protein NCU02803 [Neurospora crassa OR74A]
gi|74654326|sp|Q7SEL0.1|PRP28_NEUCR RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp-28
gi|28926242|gb|EAA35223.1| hypothetical protein NCU02803 [Neurospora crassa OR74A]
Length = 728
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 143/286 (50%), Gaps = 27/286 (9%)
Query: 120 EQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELR 179
EQ KNL +KK + K + + +E+ ++ I +W E
Sbjct: 250 EQRKNLGKHWSEKKLEDMKERDWRIFKENFGIA----------TKGGAIPNPMRSWEEST 299
Query: 180 LHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEE 239
L L+ + +G+ EPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++ + E
Sbjct: 300 LPRRLLDIVKNVGYDEPTPIQRAAIPIAL-QARDLIGVAVTGSGKTAAFLLPLLVYISEL 358
Query: 240 REKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGG 299
L E + YA LI+ PTREL Q+ K+ A + VV IVGG
Sbjct: 359 -----PPLTEYNKNDGPYA-------LILAPTRELVQQIESEAKKFATPLGFTVVSIVGG 406
Query: 300 MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 359
S E+Q L+ E++V TPGRL + + E+ L+ + ++DEADRMI+ G
Sbjct: 407 HSLEEQAFALRNGAEIIVATPGRLVDCL---ERRLLVFSQCCYTIMDEADRMIDQGFEEP 463
Query: 360 LQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
L I+D +P+TN + +E Q + + RQT++++AT+
Sbjct: 464 LTKILDAMPVTNEKPDTDDAENPQLMSRYVDGKDRYRQTMMYTATM 509
>gi|452986589|gb|EME86345.1| hypothetical protein MYCFIDRAFT_202484 [Pseudocercospora fijiensis
CIRAD86]
Length = 756
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 128/254 (50%), Gaps = 51/254 (20%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
A EE S +T F + N L ++K + +GF +PTPIQ IP A +GKD++G
Sbjct: 222 AAEETKSAKATATAFHSMN---LSRQILKGLAAVGFDKPTPIQAKTIPVAL-EGKDLVGG 277
Query: 218 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELA 275
A TGSGKT AF +PI++RLL Y P+ R I+ PTRELA
Sbjct: 278 AVTGSGKTAAFLIPILERLL-------------------YRPRNAATTRVAILMPTRELA 318
Query: 276 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 335
LQ + K++A ++ +GG+++ +QE+ LK RP++V+ TPGR +L V
Sbjct: 319 LQCFNVAKKLAAHTDITFGQAIGGLNSREQEKQLKLRPDIVIATPGRFIDLERNSASFAV 378
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
+T+ VLDEADRM+E G EL I+ +P K R
Sbjct: 379 --NTIEILVLDEADRMLEEGFADELNEILTKIP------------------------KSR 412
Query: 396 QTLVFSATIALSAD 409
QT++FSAT+ D
Sbjct: 413 QTMLFSATMTSKVD 426
>gi|427721123|ref|YP_007069117.1| DEAD/DEAH box helicase [Calothrix sp. PCC 7507]
gi|427353559|gb|AFY36283.1| DEAD/DEAH box helicase domain protein [Calothrix sp. PCC 7507]
Length = 438
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 128/232 (55%), Gaps = 40/232 (17%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L L +++++ LG+ +PTPIQK IP G D++ A+TG+GKT +F LP++
Sbjct: 2 SFSNLGLSNEIIRAVTELGYTKPTPIQKQAIPVIL-SGGDLLAGAQTGTGKTASFTLPLL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
RL + K+ + Y P +RALI+TPTRELA QV ++E K +N+
Sbjct: 61 HRLSNDSVKS---------TSNPYPP---IRALILTPTRELAAQVESSVREYGKYLNLNT 108
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ + GG+S Q+RLLK R +++V TPGRL + + G V L + VLDEADRM++
Sbjct: 109 MAMFGGVSINPQKRLLKGRVDILVATPGRLLDHVQQGT---VNLSHVEVLVLDEADRMLD 165
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G R+++ I+ +LP K+RQ L+F AT +
Sbjct: 166 MGFIRDIRRILSLLP------------------------KQRQNLLFFATFS 193
>gi|402885838|ref|XP_003906352.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Papio anubis]
Length = 818
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 384 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 442
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 443 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 491
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 492 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 548
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 549 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 607
>gi|126344320|ref|XP_001381629.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Monodelphis
domestica]
Length = 818
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 384 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 442
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 443 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 491
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 492 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 548
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 549 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 607
>gi|373495826|ref|ZP_09586379.1| hypothetical protein HMPREF0402_00252 [Fusobacterium sp. 12_1B]
gi|371966955|gb|EHO84433.1| hypothetical protein HMPREF0402_00252 [Fusobacterium sp. 12_1B]
Length = 527
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 110/181 (60%), Gaps = 24/181 (13%)
Query: 185 MKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAG 244
+K++ + G+++PTPIQ IPA KDIIG A+TG+GKT AF LPI++R
Sbjct: 17 IKALSKKGYEKPTPIQALTIPALLDGEKDIIGQAQTGTGKTAAFSLPILER--------- 67
Query: 245 KMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEK 304
+ P ++A+++ PTRELA+QV + + +A G +R+ P+ GG S E
Sbjct: 68 ------------FEPGKVVQAIVLAPTRELAIQVAEEMNSLANGKKIRITPVYGGQSIEF 115
Query: 305 QERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 364
Q R LK +++VGTPGR+ +LM ++ L++L L +F+LDEAD M+ G +++ I+
Sbjct: 116 QIRQLKKGTDIIVGTPGRVMDLM---DRKLIKLDNLKYFILDEADEMLNMGFLEDVEKIL 172
Query: 365 D 365
+
Sbjct: 173 E 173
>gi|426224567|ref|XP_004006440.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Ovis aries]
Length = 820
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 141/234 (60%), Gaps = 19/234 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 392 SWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFLIPLL 450
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ K ++ EE+++ P A+I+ PTRELA Q+ + + K + +R
Sbjct: 451 V-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGKPLGIRT 499
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 500 VAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDEADRMID 556
Query: 354 NGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 557 MGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|124430514|ref|NP_001074450.1| probable ATP-dependent RNA helicase DDX23 [Mus musculus]
gi|148672229|gb|EDL04176.1| mCG18410, isoform CRA_a [Mus musculus]
Length = 819
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 443
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 444 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 492
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 493 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 549
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 550 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 608
>gi|404406153|ref|ZP_10997737.1| DNA/RNA helicase [Alistipes sp. JC136]
Length = 541
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 139/264 (52%), Gaps = 45/264 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L L+++I G+ +PTPIQ+ IP +G+D+ G A+TG+GKT AF LPI+Q
Sbjct: 3 FQDLGLSEPLLRAIGEKGYTDPTPIQQQAIPPVL-EGRDLQGCAQTGTGKTAAFTLPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L E G+ +RAL+ITPTRELA+Q+ + ++ A+ +++R
Sbjct: 62 LLAAEPAARGRR---------------EIRALVITPTRELAIQIDECCRDYARYLSIRHC 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG++ Q L+ +L+V TPGRL +L+ G + L + FFVLDEADRM++
Sbjct: 107 VIFGGVNQRPQVDALQRGVDLLVATPGRLLDLIGQG---YISLDKIRFFVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS-ADFRKK 413
G +++ I+ +LP +RQTL FSAT+ A K
Sbjct: 164 GFIHDIRRILPLLPA------------------------QRQTLFFSATMPPDIAQLAAK 199
Query: 414 LKHGSLKLKQSVNGLNSIETLSER 437
+ H + L + +ET+S+R
Sbjct: 200 ILHDPV-LVTVTPPASVVETISQR 222
>gi|237833961|ref|XP_002366278.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211963942|gb|EEA99137.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|221486500|gb|EEE24761.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
gi|221508269|gb|EEE33856.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 734
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 130/238 (54%), Gaps = 10/238 (4%)
Query: 178 LRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLL 237
+++HPLL++++ R+ + +PTPIQK IP G+D++ A+TGSGKT AF PI+ R+L
Sbjct: 235 MQIHPLLLQNVSRVNYTKPTPIQKNSIPTIL-SGRDLMACAQTGSGKTAAFLYPIIARML 293
Query: 238 EEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIV 297
++ G + P + L+++PTRELA+Q+ + ++ G VR V +
Sbjct: 294 QDGPPPLPQAAAGGGSGYR-KPPAYPICLVLSPTRELAMQIYEEARKFQFGTGVRTVAVY 352
Query: 298 GGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 357
GG ++Q L ++ V TPGRL +L+ E+ V L + FFVLDEADRM++ G
Sbjct: 353 GGSDVKRQLIDLDGGCDICVATPGRLVDLL---ERRKVRLGLVQFFVLDEADRMLDMGFL 409
Query: 358 RELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSADF 410
+++ I++ + + + +R RQT++FSAT L+ DF
Sbjct: 410 PQIKLIVESFDLPPSPTPQTAGYPSLGGDSGAGRRVGRQTVMFSATFPREIQMLAKDF 467
>gi|116626579|ref|YP_828735.1| DEAD/DEAH box helicase [Candidatus Solibacter usitatus Ellin6076]
gi|116229741|gb|ABJ88450.1| DEAD/DEAH box helicase domain protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 422
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 124/231 (53%), Gaps = 48/231 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACI-PAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++EL L L ++ + F EPTPIQ I PA A GKDI+ A+TG+GKTLAF LP +
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALA--GKDIVATAQTGTGKTLAFLLPTI 61
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q L E + G +RALI+TPTRELALQ+ + L ++A+G +R
Sbjct: 62 QLLSTEPRQPG------------------VRALILTPTRELALQINEALLQIARGTGIRA 103
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
VGG++ Q R ++ +VV TPGRL++ MS G L+ L T+ +LDE+DRM++
Sbjct: 104 AVAVGGLNERSQLRDIRGGANIVVATPGRLYDFMSRG---LINLTTVRMLILDESDRMLD 160
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++ II +P +RQTL+FSAT+
Sbjct: 161 MGFLPTIKRIIAAMP------------------------AERQTLLFSATL 187
>gi|395528498|ref|XP_003766366.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Sarcophilus
harrisii]
Length = 818
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 384 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 442
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 443 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 491
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 492 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 548
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 549 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 607
>gi|315648503|ref|ZP_07901602.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
gi|315276197|gb|EFU39543.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
Length = 536
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 139/250 (55%), Gaps = 53/250 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + L P ++++I LGF+E TPIQ IP A G+D+IG A+TG+GKT AFGLP++
Sbjct: 4 FADFGLEPRVLQAITELGFEEATPIQSQSIPIAL-TGRDMIGQAQTGTGKTAAFGLPLIH 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +E E+ + +LI+TPTRELA+QV + + ++++ +R +
Sbjct: 63 KIAKEEER--------------------IVSLIMTPTRELAIQVAEEIGKLSRFKGIRSL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG +Q R LK +P++++GTPGRL + ++ + + L + VLDEAD M++
Sbjct: 103 AIYGGQDIGRQIRALKKKPQIIIGTPGRLLDHIN---RKTIRLDDVQTVVLDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++QSI+ ++P ++RQTL+FSAT+ L++
Sbjct: 160 GFMEDIQSILKLVP------------------------EERQTLLFSATMPANIQKLASQ 195
Query: 410 FRKKLKHGSL 419
F K +H S+
Sbjct: 196 FLKDPEHVSV 205
>gi|212712156|ref|ZP_03320284.1| hypothetical protein PROVALCAL_03238 [Providencia alcalifaciens DSM
30120]
gi|422018909|ref|ZP_16365460.1| ATP-dependent RNA helicase with P-loop hydrolase domain
[Providencia alcalifaciens Dmel2]
gi|212685203|gb|EEB44731.1| hypothetical protein PROVALCAL_03238 [Providencia alcalifaciens DSM
30120]
gi|414104095|gb|EKT65667.1| ATP-dependent RNA helicase with P-loop hydrolase domain
[Providencia alcalifaciens Dmel2]
Length = 477
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 133/236 (56%), Gaps = 51/236 (21%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++++L L+ ++++I LG++ PTPIQ+ IPA GKD++ +A+TG+GKT F LPI+
Sbjct: 31 SFSDLALNEEILRAINELGYESPTPIQQQAIPAVL-AGKDLLASAQTGTGKTAGFTLPIL 89
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGH----LRALIITPTRELALQVTDHLKEVAKGI 289
Q+L++ P+G+ +RALI+TPTRELA QV +++KE ++ +
Sbjct: 90 QKLVDN-------------------PRGNNRRPIRALILTPTRELAAQVAENVKEYSRHL 130
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
+R + GG+S Q L+ ++++ TPGRL +L ++ V+L + FVLDEAD
Sbjct: 131 KIRSFVVFGGVSINPQMMKLRGGVDVLIATPGRLLDL---EHQNAVDLSQVEVFVLDEAD 187
Query: 350 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
RM++ G +++ +I LP KKRQ L+FSAT +
Sbjct: 188 RMLDMGFIHDIRRVITKLP------------------------KKRQNLLFSATFS 219
>gi|119186507|ref|XP_001243860.1| hypothetical protein CIMG_03301 [Coccidioides immitis RS]
gi|118595360|sp|Q1E2B2.1|DRS1_COCIM RecName: Full=ATP-dependent RNA helicase DRS1
gi|392870577|gb|EAS32387.2| ATP-dependent RNA helicase DRS1 [Coccidioides immitis RS]
Length = 840
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 128/254 (50%), Gaps = 48/254 (18%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
A EE +++E ++ + L +++ + +GF PTPIQ+ IP GKD++G
Sbjct: 304 APEENPTKSEETSSNSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPVGL-LGKDLVGG 362
Query: 218 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELA 275
A TGSGKT AF +PI++RLL Y P+ R I+ PTRELA
Sbjct: 363 AVTGSGKTAAFIIPILERLL-------------------YRPRKVPTSRVAILMPTRELA 403
Query: 276 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 335
+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M V
Sbjct: 404 VQCYNVATKLATYTDITFCQLVGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFTV 463
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
+ TL VLDEADRM+E+G EL I++ +P K R
Sbjct: 464 D--TLEILVLDEADRMLEDGFADELNEILNTIP------------------------KSR 497
Query: 396 QTLVFSATIALSAD 409
QT++FSAT+ S D
Sbjct: 498 QTMLFSATMTDSVD 511
>gi|163789736|ref|ZP_02184173.1| hypothetical protein CAT7_05876 [Carnobacterium sp. AT7]
gi|159874958|gb|EDP69025.1| hypothetical protein CAT7_05876 [Carnobacterium sp. AT7]
Length = 423
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 44/230 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NEL L+ L+ ++ G+ + TPIQ+ IP + KD++G A+TG+GKT AF LPI+Q
Sbjct: 3 FNELELNQHLLHALKEAGYTKATPIQEDAIPHLLN-NKDLLGCAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++EE K KG ++ALI+ PTRELA+Q+ + + AK + + +
Sbjct: 62 NIMEE----------------KTVGKGAIKALILAPTRELAIQIGESFQTYAKYLPLNIQ 105
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S Q LK ++++ TPGRL +L+ G V+L+ + FFVLDEAD M++
Sbjct: 106 VIFGGVSQNPQTATLKRGTDILIATPGRLLDLIRQG---FVKLNQVEFFVLDEADMMLDM 162
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G R+++ II LP KKRQ++ FSAT+
Sbjct: 163 GMLRDVRHIIRELP------------------------KKRQSMFFSATM 188
>gi|339007892|ref|ZP_08640466.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
gi|338775095|gb|EGP34624.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
Length = 506
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 126/230 (54%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NEL L P +++SI +GF+E TPIQ IP A G+D+IG A+TG+GKT+AFG+P+++
Sbjct: 4 FNELGLSPSVLRSISNMGFEEATPIQALTIPVAL-TGRDLIGQAQTGTGKTVAFGIPMIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ H++ +++ PTRELA+QV++ L ++ + ++ +
Sbjct: 63 KI--------------------DTSSNHIQGIVLAPTRELAVQVSEELIKLGQYTGIKTL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK P ++V TPGRL + ++ + + L + VLDEAD M+
Sbjct: 103 PIYGGQDIMRQIRALKKNPHVIVATPGRLIDHIN---RRTIRLQNIQTLVLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E++SI++ +P +RQTL+FSAT+
Sbjct: 160 GFIEEIESILEQIP------------------------DERQTLLFSATM 185
>gi|451852848|gb|EMD66142.1| hypothetical protein COCSADRAFT_179496 [Cochliobolus sativus
ND90Pr]
Length = 814
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 120/236 (50%), Gaps = 44/236 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ + L +++ + +GF EPTPIQ +P A QGKD++G AETGSGKT AF +PI+
Sbjct: 289 SFQAMSLSRPILRGLASVGFTEPTPIQSKAVPIAM-QGKDVVGGAETGSGKTAAFLIPIL 347
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+RLL ++K R I PTRELA+Q + ++A ++
Sbjct: 348 ERLLYRQKKIPTT-----------------RVAIFMPTRELAVQCFNVATKLASFTDITF 390
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG S+ +QE +LK RP++V+ TPGR + M VE L VLDEADRM+E
Sbjct: 391 ALMAGGFSSREQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--NLEILVLDEADRMLE 448
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
G +L I+ +P K RQT++FSAT+ S D
Sbjct: 449 EGFESQLNEILTTIP------------------------KSRQTMLFSATMTSSVD 480
>gi|407475055|ref|YP_006789455.1| DEAD/DEAH box helicase [Clostridium acidurici 9a]
gi|407051563|gb|AFS79608.1| DEAD-box ATP-dependent RNA helicase CshA [Clostridium acidurici 9a]
Length = 526
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 129/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L+ ++K+I LGF+EP+ IQK IP +G D+IG A+TG+GKTLAFG P++
Sbjct: 6 FKDLGLNEDILKAINELGFEEPSKIQKEAIPVVL-EGFDVIGQAQTGTGKTLAFGAPVIN 64
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ ++ GK + +++ITPTRELA+QV D + + K VR +
Sbjct: 65 KI---KKSTGK-----------------ISSIVITPTRELAIQVNDEISRIGKYTRVRTL 104
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG ++Q R +K +++VGTPGR+ +L+ + +V+L ++F VLDEAD M++
Sbjct: 105 PVYGGKPIDRQIRAIKQGVDVLVGTPGRVLDLI---RRRVVDLSRVNFLVLDEADEMLDM 161
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II P + RQT++FSAT+
Sbjct: 162 GFIDDIEEIIRNCP------------------------EDRQTMLFSATM 187
>gi|373124645|ref|ZP_09538486.1| hypothetical protein HMPREF0982_03415 [Erysipelotrichaceae
bacterium 21_3]
gi|422328761|ref|ZP_16409787.1| hypothetical protein HMPREF0981_03107 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371659039|gb|EHO24308.1| hypothetical protein HMPREF0981_03107 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371659613|gb|EHO24878.1| hypothetical protein HMPREF0982_03415 [Erysipelotrichaceae
bacterium 21_3]
Length = 437
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 127/230 (55%), Gaps = 47/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ L + ++K++ G+ +PTPIQ+ IP A QG+DI+G A+TG+GKT AF +P +Q
Sbjct: 3 FQTLHITEPILKAVKEQGYVDPTPIQEQAIPYAL-QGRDILGCAQTGTGKTAAFSIPTIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L K K +R+LI+TPTRELA+Q+ +++ A+ +R
Sbjct: 62 LL-------------------KKHYKQSIRSLIVTPTRELAIQIQENITAYAQYTTIRSA 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + QER+LKA +++V TPGRL +L+ G ++++ + F+LDEADRM++
Sbjct: 103 VIFGGVPQKPQERILKAGVDILVATPGRLNDLIQQG---IIDISHIEIFILDEADRMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II LP K++QTL FSAT+
Sbjct: 160 GFLPDVKRIIAKLP------------------------KRKQTLFFSATM 185
>gi|297744770|emb|CBI38032.3| unnamed protein product [Vitis vinifera]
Length = 797
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 133/241 (55%), Gaps = 27/241 (11%)
Query: 166 AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKT 225
++I +W E +L L+K++ R G+K P+PIQ A IP Q +D+IG AETGSGKT
Sbjct: 299 SKIPRPMRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQ-RDVIGIAETGSGKT 357
Query: 226 LAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
AF LP++ + L EE E P A+++ PTRELA Q+ D +
Sbjct: 358 AAFVLPMLTYI--------SRLPPMSEENEAEGPY----AVVMAPTRELAQQIEDETVKF 405
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 406 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVL 462
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK--RQTLVFSAT 403
DEADRMI+ G ++ ++D +P +N E + E+ L KK R T +FSAT
Sbjct: 463 DEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSAT 513
Query: 404 I 404
+
Sbjct: 514 M 514
>gi|261415437|ref|YP_003249120.1| DEAD/DEAH box helicase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371893|gb|ACX74638.1| DEAD/DEAH box helicase domain protein [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 486
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 130/230 (56%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L L +++ +G++ PTPIQ+ IP+ +GKD++G A+TG+GKT AF LPI+Q
Sbjct: 3 FEELPLANPLQRAVRAVGYETPTPIQERSIPSLL-EGKDLLGIAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RLL+ +GK +PK RALI+ PTRELA+QV D +E A+ +
Sbjct: 62 RLLD----SGKF----------RSPKT-CRALILLPTRELAIQVEDCFREYAQFTAISTA 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG++ Q++ L +++V TPGRL +L+ G+K + L L FFVLDEADRM++
Sbjct: 107 CIFGGVNDNPQKQKLIRGVDVLVATPGRLLDLI--GQK-AISLKKLEFFVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ ++ MLP + RQ L FSAT+
Sbjct: 164 GFIHDIRKVVAMLP------------------------QDRQNLFFSATM 189
>gi|351697633|gb|EHB00552.1| Putative ATP-dependent RNA helicase DDX23 [Heterocephalus glaber]
Length = 819
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 443
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 444 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 492
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 493 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 549
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 550 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 608
>gi|320589197|gb|EFX01659.1| dead deah box DNA helicase [Grosmannia clavigera kw1407]
Length = 734
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 17/231 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L P L+ + +G+ EPTPIQ+A IP A QG+D+IG A TGSGKT AF LP++
Sbjct: 305 WRESPLPPRLLDVVEAVGYTEPTPIQRAAIPIAL-QGRDLIGVAVTGSGKTAAFLLPLLV 363
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ E L E ++ P ALI+ PTRELA Q+ ++ A VV
Sbjct: 364 YIKE--------LPPLDEISKNDGPY----ALILAPTRELAQQIESEARKFATPFGYTVV 411
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG S E+Q L+ E+VV TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 412 SIVGGHSLEEQAYALRNGAEIVVATPGRLVDCI---ERRLLVLSQCCYVIMDEADRMIDL 468
Query: 355 GHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G L I+D +P N + ++E + + + R+T++++AT+
Sbjct: 469 GFEDPLNKILDAMPTANEKPDTDEAEDARAMTQYLGGKIRYRETMMYTATM 519
>gi|226468232|emb|CAX69793.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Schistosoma japonicum]
Length = 606
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 141/238 (59%), Gaps = 16/238 (6%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W E+ + L I ++G+ EPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 171 IPNPLRSWAEMNVADELKDVIKKVGYPEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 229
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + ++ K+ E+ E+ E+ P A+I+ PTRELA Q+ + + +
Sbjct: 230 FLIPLLNWI----QRLPKL--ERLEDTEQ-GPY----AIIMAPTRELAQQIEEETVKFGR 278
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ ++ V ++GG+S E Q L+ E+V+GTPGRL +++ E + L+ ++ VLDE
Sbjct: 279 PLGIKTVSLIGGLSREDQALKLRMGAEIVIGTPGRLNDVL---ENRYMVLNQCTYIVLDE 335
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
AD+MI+ G E+ +I+ LP+TN + + +E ++ + + K RQT++F+AT+
Sbjct: 336 ADKMIDMGFEPEVNNILTYLPVTNEKPDNEDAEDDSKLLSNFATKHKYRQTVMFTATM 393
>gi|197246501|gb|AAI69082.1| Ddx23 protein [Rattus norvegicus]
Length = 798
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 364 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 422
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 423 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 471
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 472 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 528
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 529 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 587
>gi|421861510|ref|ZP_16293512.1| DNA and RNA helicase [Paenibacillus popilliae ATCC 14706]
gi|410828936|dbj|GAC43949.1| DNA and RNA helicase [Paenibacillus popilliae ATCC 14706]
Length = 517
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 139/254 (54%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+++I LGF+E TPIQ+ IP A G+D+IG A+TG+GKT AFG+P++
Sbjct: 7 FVELGLEPKLLQAITELGFEEATPIQEIAIPVAM-MGRDLIGQAQTGTGKTAAFGIPLIS 65
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ E+ + AL++TPTRELA+QV + + ++ + VR +
Sbjct: 66 KIDPSEER--------------------VVALVMTPTRELAIQVAEEIGKLTRFKGVRSL 105
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK P++++GTPGRL + ++ + + L+ + VLDEAD M++
Sbjct: 106 PIYGGQDIGRQIRALKKHPQIIIGTPGRLLDHIN---RKTIRLNDVQTVVLDEADEMLDM 162
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++ SI+ ++P ++RQT++FSAT+ L+
Sbjct: 163 GFMEDITSILSLVP------------------------EERQTMLFSATMPPNIQKLANQ 198
Query: 410 FRKKLKHGSLKLKQ 423
F + +H S+ KQ
Sbjct: 199 FLRDPEHVSVIPKQ 212
>gi|303317730|ref|XP_003068867.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108548|gb|EER26722.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 840
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 128/254 (50%), Gaps = 48/254 (18%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
A EE +++E ++ + L +++ + +GF PTPIQ+ IP GKD++G
Sbjct: 304 APEENPTKSEETSSNSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPIGLL-GKDLVGG 362
Query: 218 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELA 275
A TGSGKT AF +PI++RLL Y P+ R I+ PTRELA
Sbjct: 363 AVTGSGKTAAFIIPILERLL-------------------YRPRKVPTSRVAILMPTRELA 403
Query: 276 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 335
+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M V
Sbjct: 404 VQCYNVATKLATYTDITFCQLVGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFTV 463
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
+ TL VLDEADRM+E+G EL I++ +P K R
Sbjct: 464 D--TLEILVLDEADRMLEDGFADELNEILNTIP------------------------KSR 497
Query: 396 QTLVFSATIALSAD 409
QT++FSAT+ S D
Sbjct: 498 QTMLFSATMTDSVD 511
>gi|346317243|ref|ZP_08858729.1| hypothetical protein HMPREF9022_04386 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345900333|gb|EGX70155.1| hypothetical protein HMPREF9022_04386 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 437
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 129/230 (56%), Gaps = 47/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ L + ++K++ G+ +PTPIQ+ IP A QG+DI+G A+TG+GKT AF +P +Q
Sbjct: 3 FQTLHITEPILKAVKEQGYVDPTPIQEQAIPYAL-QGRDILGCAQTGTGKTAAFSIPTIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
LL++ K +R+LI+TPTRELA+Q+ +++ A+ +R
Sbjct: 62 -LLKKHYKQS------------------IRSLIVTPTRELAIQIQENITAYAQYTTIRSA 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + QER+LKA +++V TPGRL +L+ G ++++ + F+LDEADRM++
Sbjct: 103 VIFGGVPQKPQERILKAGVDILVATPGRLNDLIQQG---IIDISHIEIFILDEADRMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II LP K++QTL FSAT+
Sbjct: 160 GFLPDVKRIIAKLP------------------------KRKQTLFFSATM 185
>gi|427400760|ref|ZP_18891998.1| hypothetical protein HMPREF9710_01594 [Massilia timonae CCUG 45783]
gi|425720273|gb|EKU83196.1| hypothetical protein HMPREF9710_01594 [Massilia timonae CCUG 45783]
Length = 523
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 125/232 (53%), Gaps = 42/232 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + L P + +++ G+ PTPIQ IP QG+D++GAA+TG+GKT +F LPI+Q
Sbjct: 42 FADFGLAPEIQRALSDQGYVHPTPIQAQAIPVVL-QGRDVMGAAQTGTGKTASFSLPILQ 100
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
L+ + +P H +RAL++ PTRELA+QV D++K A+ +R
Sbjct: 101 LLMPHANAS-------------MSPARHPVRALVLVPTRELAVQVADNVKAYARHTPLRA 147
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GGM + Q +L+ E+V+ TPGRL + + E+ V L + V+DEADRM++
Sbjct: 148 TVVFGGMDMKPQTEILRRGVEIVIATPGRLLDHI---EQKNVSLGQVQMLVMDEADRMLD 204
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +LQ II++LP K+RQ L+FSAT +
Sbjct: 205 MGFLPDLQRIINLLP------------------------KQRQNLMFSATFS 232
>gi|335356475|ref|ZP_08548345.1| ATP-dependent RNA helicase [Lactobacillus animalis KCTC 3501]
Length = 503
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 126/231 (54%), Gaps = 50/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL L L+K++ R GF+E TPIQ+A IP GKD+IG A+TG+GKT AFGLPI+
Sbjct: 3 FDELGLSEDLLKAVKRSGFEEATPIQEATIPLVL-AGKDVIGQAQTGTGKTAAFGLPIL- 60
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
E PK H ++A+II+PTRELA+Q + L + K RV
Sbjct: 61 --------------------EHVDPKEHAIQAIIISPTRELAIQTQEELYRLGKDKRARV 100
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG +Q +LLK P+++VGTPGRL + ++ + V+L + VLDEAD M++
Sbjct: 101 QVVYGGADIRRQIKLLKNPPQILVGTPGRLLDHIN---RKTVDLSKVKMLVLDEADEMLD 157
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II +P GQ RQTL+FSAT+
Sbjct: 158 MGFLDDIEKIISNVP-------GQ-----------------RQTLLFSATM 184
>gi|320038882|gb|EFW20817.1| ATP-dependent RNA helicase DRS1 [Coccidioides posadasii str.
Silveira]
Length = 840
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 128/254 (50%), Gaps = 48/254 (18%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
A EE +++E ++ + L +++ + +GF PTPIQ+ IP GKD++G
Sbjct: 304 APEENPTKSEETSSNSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPIGLL-GKDLVGG 362
Query: 218 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELA 275
A TGSGKT AF +PI++RLL Y P+ R I+ PTRELA
Sbjct: 363 AVTGSGKTAAFIIPILERLL-------------------YRPRKVPTSRVAILMPTRELA 403
Query: 276 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 335
+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M V
Sbjct: 404 VQCYNVATKLATYTDITFCQLVGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFTV 463
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
+ TL VLDEADRM+E+G EL I++ +P K R
Sbjct: 464 D--TLEILVLDEADRMLEDGFADELNEILNTIP------------------------KSR 497
Query: 396 QTLVFSATIALSAD 409
QT++FSAT+ S D
Sbjct: 498 QTMLFSATMTDSVD 511
>gi|261749520|ref|YP_003257206.1| ATP-dependent RNA helicase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497613|gb|ACX84063.1| ATP-dependent RNA helicase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 542
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 124/224 (55%), Gaps = 50/224 (22%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL-LEEREK 242
+++++ LG K PTPIQK IP GKD+I A+TG+GKT AFGLPI+Q++ LE R
Sbjct: 14 IIQALEDLGIKTPTPIQKKVIPYLLKSGKDLIALAQTGTGKTAAFGLPIIQKINLEFR-- 71
Query: 243 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-VRVVPIVGGMS 301
P+ ALI+ PTREL +Q+T L ++ I+ ++++P+ GG+S
Sbjct: 72 ---------------FPQ----ALILCPTRELCIQITRDLSRFSRYISLIKIIPLYGGVS 112
Query: 302 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 361
E Q L+ R ++VGTPGR+ +L+ + HL + + + VLDEAD M+ G EL
Sbjct: 113 IENQILSLQKRTHIIVGTPGRIIDLIERKKLHLSD---IKYLVLDEADEMLNMGFKEELD 169
Query: 362 SIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
SII LP KKRQ+L+FSAT++
Sbjct: 170 SIIIKLP------------------------KKRQSLLFSATMS 189
>gi|380448994|gb|AFD54569.1| vasa [Lepeophtheirus salmonis]
Length = 539
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 135/249 (54%), Gaps = 36/249 (14%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDII 215
D + ++ ++ + + ++EL L LL+++I G+K+PTPIQK IP + +DI+
Sbjct: 100 DSVQVDVKGTGDLPPKINCFSELNLRELLVRNIGLSGYKKPTPIQKTGIPLILAK-RDIM 158
Query: 216 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 275
++TGSGKT AF LPI+Q +L++ E + ++K LI+ PTRELA
Sbjct: 159 ACSQTGSGKTAAFLLPIIQFILQKGEFSSASSQQKPS------------CLIVAPTRELA 206
Query: 276 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 335
+Q+ D ++ +KG ++ V + GG S Q + ++++ TPGRL +L+S G V
Sbjct: 207 IQIKDEARKFSKGSMIKSVVLYGGTSVGYQCSQIVRGVDILIATPGRLLDLVSKGA---V 263
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
L + FFVLDEADRM++ G E++ I+ SE C T R
Sbjct: 264 SLDAVQFFVLDEADRMLDMGFLPEVKRIV-------------SEGNMCCKT-------SR 303
Query: 396 QTLVFSATI 404
QTL+FSAT
Sbjct: 304 QTLMFSATF 312
>gi|195118551|ref|XP_002003800.1| GI21075 [Drosophila mojavensis]
gi|193914375|gb|EDW13242.1| GI21075 [Drosophila mojavensis]
Length = 515
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 141/285 (49%), Gaps = 53/285 (18%)
Query: 152 SNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
++ PD++EE +EA + W +L L+ L K+ L +K P+ IQK IP A QG
Sbjct: 41 TSDPDESEE---TEAPKCEQLQTWKDLGLNETLCKACEELKWKAPSKIQKEAIPVAL-QG 96
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 271
KDIIG AETGSGKT AF LPI+ LLE P+ + AL++TPT
Sbjct: 97 KDIIGLAETGSGKTGAFALPILHALLEN-------------------PQRYF-ALVLTPT 136
Query: 272 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 331
RELA Q+ + + + GI ++ +VGGM Q L +P +++ TPGRL + + +
Sbjct: 137 RELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENLK 196
Query: 332 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 391
L + + V+DEADR++ EL I+ +LP
Sbjct: 197 G--FNLKAIKYLVMDEADRILNMDFEVELDKILKVLP----------------------- 231
Query: 392 RKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSE 436
++R+T +FSAT+ KKL+ SLK V N +T+ +
Sbjct: 232 -RERRTFLFSATMTKKV---KKLQRASLKDPVKVEVSNKYQTVDQ 272
>gi|110680325|ref|YP_683332.1| ATP-dependent RNA helicase [Roseobacter denitrificans OCh 114]
gi|109456441|gb|ABG32646.1| putative ATP-dependent RNA helicase, putative [Roseobacter
denitrificans OCh 114]
Length = 433
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 131/235 (55%), Gaps = 46/235 (19%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
++F+ N L P L+ + R+G K+PTPIQK IP A + G+D++G A+TG+GKT AFG
Sbjct: 2 SDFEMMN---LPPELVARLGRMGLKDPTPIQKQAIPHAMN-GRDVMGLAQTGTGKTAAFG 57
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 289
+P++ +MLE G A K +R L++ PTRELA Q++ +L+ A+
Sbjct: 58 VPLV----------AQMLELDGRPAPK-----SVRGLVLAPTRELATQISVNLRSFAENT 102
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
V+V +VGG S Q + L+ +L+V TPGRL +LM ++ V L F VLDEAD
Sbjct: 103 KVKVAMVVGGQSINNQIKRLERGVDLLVATPGRLLDLM---DRRAVRLDEAVFLVLDEAD 159
Query: 350 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+M++ G +L+ I ++P K+RQT++FSAT+
Sbjct: 160 QMLDMGFIHDLRKIASVIP------------------------KERQTMLFSATM 190
>gi|390339167|ref|XP_789805.2| PREDICTED: probable ATP-dependent RNA helicase DDX23
[Strongylocentrotus purpuratus]
Length = 785
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 137/231 (59%), Gaps = 16/231 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+E L + I +G+K+P+PIQ+ IP Q +D+IG AETGSGKT AF +P++
Sbjct: 358 WDEYGLPKHITDIIAEVGYKDPSPIQRQAIPIGL-QNRDVIGVAETGSGKTAAFLIPLLV 416
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K+ ++ ++ YA +I+ PTRELA Q+ + + K + +R V
Sbjct: 417 WI----STLPKIERDEDKDQGPYA-------IILAPTRELAQQIEEETIKFGKPLGIRTV 465
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I+GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 466 TIIGGISREDQGFKLRLGCEIVIATPGRLIDVLEN--RYLV-LCQCTYVVLDEADRMIDM 522
Query: 355 GHFRELQSIIDMLPMTNGSNEG-QSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ LP+TN + ++E + + + ++K RQT++F+AT+
Sbjct: 523 GFEPDVQKILEYLPVTNQKPDSEEAEDSAKLLANFASKKKYRQTVMFTATM 573
>gi|83950175|ref|ZP_00958908.1| putative ATP-dependent RNA helicase protein [Roseovarius
nubinhibens ISM]
gi|83838074|gb|EAP77370.1| putative ATP-dependent RNA helicase protein [Roseovarius
nubinhibens ISM]
Length = 431
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 125/233 (53%), Gaps = 44/233 (18%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
FD ++ L L P L +++ R GF EPTPIQ IP A +G DI+G A+TG+GKTLAFGLP
Sbjct: 2 FD-FDMLGLAPALNEALTRAGFSEPTPIQNQAIPLAL-EGHDILGLAQTGTGKTLAFGLP 59
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
++ LL E G+ A K A +ALI+ PTREL Q+ D L+ + G +
Sbjct: 60 LINHLLAE----------PGKPAPKTA-----KALILAPTRELVNQIADSLRNLTDGTRL 104
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
RV +VGG S +Q L +++V TPGRL +LM ++ V+L ++ VLDEAD+M
Sbjct: 105 RVATVVGGQSINRQITFLARGTDILVATPGRLIDLM---DRRAVDLGSVRHLVLDEADQM 161
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++ G L+ I L RQT++FSAT+
Sbjct: 162 LDLGFIHALRKIAPRL------------------------GTPRQTMLFSATM 190
>gi|348580205|ref|XP_003475869.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Cavia
porcellus]
Length = 819
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 443
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 444 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 492
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 493 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 549
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 550 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 608
>gi|325295336|ref|YP_004281850.1| DEAD/DEAH box helicase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065784|gb|ADY73791.1| DEAD/DEAH box helicase domain protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 425
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 133/235 (56%), Gaps = 52/235 (22%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
EF +N+L L + KS+ +GF+ PTPIQK IP A +G DI+G A+TG+GKT AFG+
Sbjct: 12 EF-TFNQLDLK--VQKSLEEMGFESPTPIQKEAIPLAL-EGYDIVGQAQTGTGKTAAFGI 67
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
PI++ + RE+ ++A+++TPTRELA+QV L + K
Sbjct: 68 PIIENI-NSRERG-------------------VKAIVLTPTRELAIQVAHELSLIGKNKG 107
Query: 291 VRVVPIVGGMSTEKQERLLK-ARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
V PI GG+S E+Q +LK R ++VVGTPGR+ +L+S G L++L + F VLDEAD
Sbjct: 108 VSAYPIYGGVSIERQANILKRGRNQIVVGTPGRVKDLISRG---LLKLDRVRFAVLDEAD 164
Query: 350 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+M++ G +++ I+ P +++QTL+FSAT+
Sbjct: 165 QMLDMGFIEDIEEILSKTP------------------------REKQTLLFSATM 195
>gi|303283946|ref|XP_003061264.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457615|gb|EEH54914.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 809
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 123/232 (53%), Gaps = 43/232 (18%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPI 232
+++N+L L L+++ LG+ PTPIQ A +P A G+DI G A TGSGKT AF LP+
Sbjct: 178 ESFNDLNLSRQLIRACTALGYDVPTPIQAAVVPLAL-TGRDICGRAVTGSGKTAAFMLPL 236
Query: 233 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 292
++R+L +A A H+ L++ PTRELA+QV +A+ ++R
Sbjct: 237 LERMLHRGARA--------------AAATHV--LVLVPTRELAVQVHQMTMRLAQFTSIR 280
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+VGG+S Q L+ RPE+VV TPGRL + + H V L L+ VLDEADR++
Sbjct: 281 AALVVGGLSANTQAAELRTRPEIVVATPGRLIDHVRN--THSVGLEDLAALVLDEADRLL 338
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
E G E++ I+ P +RQT++FSAT+
Sbjct: 339 EMGFLEEIREIVRHCPT------------------------RRQTMLFSATL 366
>gi|309781736|ref|ZP_07676469.1| ATP-dependent RNA helicase [Ralstonia sp. 5_7_47FAA]
gi|308919377|gb|EFP65041.1| ATP-dependent RNA helicase [Ralstonia sp. 5_7_47FAA]
Length = 498
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 48/258 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
S FD++ LHP +++++ G+ +PTPIQ A IP G D++GAA+TG+GKT F
Sbjct: 17 SVTFDSFG---LHPDVLRALTESGYTKPTPIQAAAIPVVT-AGHDVMGAAQTGTGKTAGF 72
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAK 287
LPI+ LL + + +P H +RALI+TPTRELA QV D++ + AK
Sbjct: 73 SLPIIHNLLPDANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYAK 119
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+R + GG+ Q L+ E++V TPGRL + + ++ V L + VLDE
Sbjct: 120 YTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLDE 176
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 177 ADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSPE 212
Query: 408 ADFRKKLKHGSLKLKQSV 425
K+L L+ Q++
Sbjct: 213 I---KRLAASYLRHPQTI 227
>gi|138893877|ref|YP_001124330.1| DEAD/DEAH box helicase [Geobacillus thermodenitrificans NG80-2]
gi|134265390|gb|ABO65585.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Geobacillus
thermodenitrificans NG80-2]
Length = 467
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 127/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L +MK+I R+GF+E TPIQ IP + Q KD+IG A+TG+GKT AFG+PI++
Sbjct: 4 FQELGLSKEVMKAIERMGFEETTPIQAKTIPLSL-QNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ G ++AL++ PTRELA+QV++ L ++ VRV+
Sbjct: 63 KV--------------------DVKNGVIQALVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG E+Q R LK P ++VGTPGR+ + ++ G L + T+ VLDEAD M+
Sbjct: 103 PIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVRTV---VLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P +RQTL+FSAT+
Sbjct: 160 GFIEDIEAILRHVP------------------------TERQTLLFSATM 185
>gi|251796145|ref|YP_003010876.1| DEAD/DEAH box helicase [Paenibacillus sp. JDR-2]
gi|247543771|gb|ACT00790.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. JDR-2]
Length = 535
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 137/254 (53%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E L P ++++I LGF+E TPIQ IP A G D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFGLEPKVLQAITELGFEESTPIQDKSIPIAM-AGSDMIGQAQTGTGKTAAFGIPLIN 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ E+ + ALI+TPTRELA+QV D + ++ K +R +
Sbjct: 63 KISINEER--------------------IVALIMTPTRELAIQVADEIGKLTKYKGLRSL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK +P++++GTPGRL + ++ + ++L + VLDEAD M++
Sbjct: 103 PIYGGQEIGRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVQTVVLDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++QSI+ +P ++RQTL+FSAT+ L+
Sbjct: 160 GFMEDIQSILKQVP------------------------EERQTLLFSATMPPNIQKLAQQ 195
Query: 410 FRKKLKHGSLKLKQ 423
F K +H ++ KQ
Sbjct: 196 FLKNPEHVAVISKQ 209
>gi|114046738|ref|YP_737288.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-7]
gi|113888180|gb|ABI42231.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-7]
Length = 409
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 42/231 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L LH L+ ++ LG+ +PTPIQ IPA + +D++ A+TG+GKT AF LPI+
Sbjct: 2 SFSALSLHSQLVNTLAELGYLQPTPIQVEAIPAILAK-QDVMAGAQTGTGKTAAFALPIL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q+LL + E + APK +RAL++ PTRELA+QV + AKG ++RV
Sbjct: 61 QQLLLDNE-------------SQDAPK-DIRALVLVPTRELAVQVQQSFVKYAKGTDIRV 106
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
GG+S E Q+ KA ++++ TPGRL + + G ++ L LS V DEADRM++
Sbjct: 107 GIAYGGVSIEAQQAEFKAGVDVLIATPGRLLDHLRQG---VLNLKYLSVLVFDEADRMLD 163
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E+++++ +P +RQTL+FSAT+
Sbjct: 164 MGFMDEIKAVLKQVP------------------------AQRQTLLFSATL 190
>gi|452002395|gb|EMD94853.1| hypothetical protein COCHEDRAFT_1128751 [Cochliobolus
heterostrophus C5]
Length = 815
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 120/236 (50%), Gaps = 44/236 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ + L +++ + +GF EPTPIQ +P A QGKD++G AETGSGKT AF +PI+
Sbjct: 290 SFQAMSLSRPILRGLASVGFTEPTPIQSKAVPIAM-QGKDVVGGAETGSGKTAAFLIPIL 348
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+RLL ++K R I PTRELA+Q + ++A ++
Sbjct: 349 ERLLYRQKKIPTT-----------------RVAIFMPTRELAVQCFNVATKLASFTDITF 391
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG S+ +QE +LK RP++V+ TPGR + M VE L VLDEADRM+E
Sbjct: 392 ALMAGGFSSREQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--NLEILVLDEADRMLE 449
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
G +L I+ +P K RQT++FSAT+ S D
Sbjct: 450 EGFESQLNEILTTIP------------------------KSRQTMLFSATMTSSVD 481
>gi|449665189|ref|XP_004206086.1| PREDICTED: ATP-dependent RNA helicase DDX24-like, partial [Hydra
magnipapillata]
Length = 403
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 115/199 (57%), Gaps = 30/199 (15%)
Query: 263 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 322
L ALI+TPTRELA+Q+ +HL +AK ++ +VGG++ KQERLL PE+V+GTPGR
Sbjct: 23 LFALILTPTRELAIQIQNHLNCIAKYTDLSCFAVVGGLAQPKQERLLSKFPEIVIGTPGR 82
Query: 323 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 382
L++L+ G+ HL + ++ F V+DE DRM+E GHF+EL+ ++
Sbjct: 83 LYKLIKDGDPHLNKFESIKFLVIDECDRMLEFGHFKELEELM------------------ 124
Query: 383 TCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 442
C+ SS R RQT VFSAT+ L +KH K+ N + ++ L ++ G+
Sbjct: 125 -CIINSSQNR--RQTFVFSATLTLP------VKH---KIYSKKNEVTQMQQLVDKIGLNH 172
Query: 443 NVAIVDLTNVSVLANKLEE 461
++DLT V A+ L +
Sbjct: 173 KAKVIDLTTKQVTASLLRQ 191
>gi|300856701|ref|YP_003781685.1| RNA helicase [Clostridium ljungdahlii DSM 13528]
gi|300436816|gb|ADK16583.1| predicted RNA helicase [Clostridium ljungdahlii DSM 13528]
Length = 525
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 127/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+++L L P ++++I +GF+EP+ IQ IP G D+IG A+TG+GKTLAFG P++
Sbjct: 6 FSDLNLDPKVLQAIDDMGFEEPSQIQAESIPVIL-DGNDVIGQAQTGTGKTLAFGAPMLS 64
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + + H+ ALI+TPTRELA+QV D L +AK V ++
Sbjct: 65 KITTKSK--------------------HISALIVTPTRELAIQVNDELSRIAKFKKVALL 104
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG ++Q R LK ++VVGTPGR+ + + ++ ++L + F +LDEAD M++
Sbjct: 105 PIYGGQPIDRQIRSLKRGMDVVVGTPGRILDHI---KRKTLDLSNIEFLILDEADEMLDM 161
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++II TN RQTL+FSAT+
Sbjct: 162 GFIEDIENII---KATNSD---------------------RQTLLFSATM 187
>gi|402591380|gb|EJW85309.1| hypothetical protein WUBG_03780, partial [Wuchereria bancrofti]
Length = 676
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 134/232 (57%), Gaps = 16/232 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L + I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 308 WEEAGLPSEVFDVIMKIGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFLIPLLV 366
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + + G + + P A+I+ PTRELA Q+ + + + + +R V
Sbjct: 367 WITS-------IPKFHGNDEQDTGPY----AIIMAPTRELAQQIEEETVKFGQLLGIRTV 415
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG S E+Q L+ E+V+ TPGRL +++ E + L ++ +LDEADRM++
Sbjct: 416 SVIGGASREEQGLKLRLGVEVVIATPGRLLDVL---ENRYLSLDQCTYVILDEADRMLDM 472
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIA 405
G E+Q +++ +P+TN + + + + + + +KK RQT++F+AT++
Sbjct: 473 GFEPEVQKVLEYIPVTNLKPDTEDAEKEESIMENFFSKKKYRQTVMFTATMS 524
>gi|353240957|emb|CCA72800.1| probable U5 snRNP 100 kD protein [Piriformospora indica DSM 11827]
Length = 724
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 31/254 (12%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W+E + P ++ I R+G+++PTPIQ+ IP Q +D+IG AETGSGKT A
Sbjct: 298 IPYPLRSWDESSIPPQILDVIARIGYEQPTPIQRQAIPIGL-QNRDLIGIAETGSGKTAA 356
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + + L +E P ALI+ PTRELA Q+ K++A
Sbjct: 357 FVIPMLTYIGQ--------LPPLTDENRHLGPY----ALILAPTRELAQQIEAETKKLAS 404
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ + V IVGG + E+Q L+ E+++ TPGRL +++ ++H+V L ++ V+DE
Sbjct: 405 PLGYKCVSIVGGRAVEEQAYNLREGAEIIIATPGRLKDVI---DRHVVVLSQCTYVVMDE 461
Query: 348 ADRMIENGHFRELQSIIDMLP--MTNGSN----EGQSEQTQTCVTVSSL---------QR 392
ADRM+ G +L I+D LP + G N +G + ++ V++L +R
Sbjct: 462 ADRMVHLGFEADLTFILDALPTDLLKGENAMEVDGMTANSKARTRVTTLFSATMPPAVER 521
Query: 393 KKRQTLVFSATIAL 406
RQ L +ATIA+
Sbjct: 522 LARQYLKKAATIAI 535
>gi|161784285|sp|Q5BCU6.2|PRP28_EMENI RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|259486970|tpe|CBF85264.1| TPA: Pre-mRNA-splicing ATP-dependent RNA helicase prp28 (EC
3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BCU6]
[Aspergillus nidulans FGSC A4]
Length = 782
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 152/277 (54%), Gaps = 29/277 (10%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W+E L L++ + R+G+KEPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++
Sbjct: 347 SWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIA-MQSRDLIGVAVTGSGKTAAFLLPLL 405
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ E + +E E G A+++ PTRELA Q+ K+ + + V
Sbjct: 406 CYIAEL---------PRIDEFEWRKNDGPY-AIVLAPTRELAQQIEIEAKKFTEPLGFNV 455
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI+
Sbjct: 456 VSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCI---ERRMLVLSQCCYVIMDEADRMID 512
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR------KKRQTLVFSATIALS 407
G + I+D LP+TN + T+ S++ R + RQT++++AT+ +
Sbjct: 513 LGFEEPVNKILDALPVTN-----EKPDTEEAEDSSAMSRHLGSKDRYRQTMMYTATMPTA 567
Query: 408 AD--FRKKLKHGSLKLKQSVNGLNSIETLSERAGMRA 442
+ RK L+ ++ S +++T+ +R M A
Sbjct: 568 VERIARKYLRRPAIVTIGSAG--EAVDTVEQRVEMIA 602
>gi|392542118|ref|ZP_10289255.1| ATP-dependent RNA helicase [Pseudoalteromonas piscicida JCM 20779]
Length = 411
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 129/230 (56%), Gaps = 44/230 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL+LHP L+ +I LGF+ PTPIQ+ IP G D+I +A+TG+GKT AF LPI+
Sbjct: 3 FSELQLHPELLSAITELGFESPTPIQEKSIPLLL-SGFDLIASAQTGTGKTAAFMLPILH 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L M +GE++ +RALI+TPTRELA QV +H +++ ++ VV
Sbjct: 62 SML--------MGGTQGEKS--------VRALILTPTRELAQQVAEHTEKLVVNTSLNVV 105
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG + QE+ L+A ++VV TPGRL + + G + L + V DEADRM++
Sbjct: 106 CLYGGANIGPQEKRLRAGVDVVVATPGRLLDHLIKGT---LTLKNIQHLVFDEADRMLDM 162
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E++ I+ +P+ KRQTL+FSAT+
Sbjct: 163 GFMGEIKRIMRTMPL------------------------KRQTLLFSATV 188
>gi|227538144|ref|ZP_03968193.1| ATP-dependent RNA helicase [Sphingobacterium spiritivorum ATCC
33300]
gi|227241987|gb|EEI92002.1| ATP-dependent RNA helicase [Sphingobacterium spiritivorum ATCC
33300]
Length = 435
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 132/242 (54%), Gaps = 45/242 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L ++K++ G++ PTPIQ+ IP Q KD++ A+TG+GKT AF +PI+Q
Sbjct: 20 FKDLKLIAPILKALEASGYQNPTPIQEQAIPII-FQRKDLLACAQTGTGKTAAFAIPILQ 78
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L +EK + +R L++TPTRELA+Q+ ++ +K + +R +
Sbjct: 79 MLTYSKEKTAQ---------------KRIRTLVLTPTRELAIQIKENFDAYSKELPIRNL 123
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + Q L+ ++++ TPGRL +L + G ++L L +FVLDEADRM++
Sbjct: 124 VIYGGVGQQPQRDALRKGIDILIATPGRLLDLYNQG---FIDLKQLEYFVLDEADRMLDM 180
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
G +++ +I ++P KKRQTL+FSAT + A+ +K
Sbjct: 181 GFIHDVKKVISIIP------------------------KKRQTLLFSAT--MPAEIQKLA 214
Query: 415 KH 416
H
Sbjct: 215 SH 216
>gi|82539888|ref|XP_724299.1| U5 snRNP 100 kD protein [Plasmodium yoelii yoelii 17XNL]
gi|23478899|gb|EAA15864.1| U5 snRNP 100 kD protein [Plasmodium yoelii yoelii]
Length = 967
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 128/235 (54%), Gaps = 16/235 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L L+K+I + +++PTPIQ IP A + +D+IG AETGSGKT AF LP++
Sbjct: 545 WEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIAL-EMRDLIGIAETGSGKTAAFVLPMLS 603
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K L E + P ALII P+RELA+Q+ D + A + R V
Sbjct: 604 YV--------KQLPPLTYETSQDGP----YALIIAPSRELAIQIYDETNKFASYCSCRTV 651
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG + E Q L+ E+V+GTPGRL + + EK L+ ++ ++DEADRM++
Sbjct: 652 AVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCL---EKAYTVLNQCNYVIIDEADRMMDM 708
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
G + I+D +P +N +E + Q + + R R T +FSAT+ S +
Sbjct: 709 GFEDAVHFILDNIPTSNLKSEDDALALQEEMMAKAGHRLYRLTQMFSATMPPSVE 763
>gi|222149464|ref|YP_002550421.1| ATP-dependent RNA helicase [Agrobacterium vitis S4]
gi|221736447|gb|ACM37410.1| ATP-dependent RNA helicase [Agrobacterium vitis S4]
Length = 484
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 129/234 (55%), Gaps = 43/234 (18%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
E ++NEL L P ++ ++ +LGF+ PTPIQ IP G+D+IG A+TG+GKT AFGL
Sbjct: 16 ELTSFNELGLSPTVVATLTQLGFETPTPIQAQGIPVVM-AGRDLIGLAQTGTGKTAAFGL 74
Query: 231 PIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN 290
PI++ L+++ E+ R LI+ PTREL Q+ D+L+ +
Sbjct: 75 PIIELLMKD---------------ERRPDNRTTRTLILAPTRELVNQIGDNLRSFIRKTP 119
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+++ +VGG S KQ+ L+ +++V TPGRL +L+S ++ + L ++ VLDEAD+
Sbjct: 120 IKINQVVGGASINKQQLQLERGTDILVATPGRLLDLIS---RNAISLRAVTHLVLDEADQ 176
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
M++ G +L+ I M+P KRQTL+FSAT+
Sbjct: 177 MLDLGFIHDLRKIAKMVP------------------------AKRQTLLFSATM 206
>gi|117919611|ref|YP_868803.1| DEAD/DEAH box helicase [Shewanella sp. ANA-3]
gi|117611943|gb|ABK47397.1| DEAD/DEAH box helicase domain protein [Shewanella sp. ANA-3]
Length = 409
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 42/231 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L LH L+ ++ LG+++PTPIQ IPA + +D++ A+TG+GKT AF LPI+
Sbjct: 2 SFSALSLHSQLVNTLAELGYQQPTPIQIEAIPAILAK-QDVMAGAQTGTGKTAAFALPIL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q+LL + E + APK +RAL++ PTRELA+QV + AKG ++RV
Sbjct: 61 QQLLIDNE-------------SQDAPK-DVRALVLVPTRELAVQVQQSFVKYAKGTDIRV 106
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
GG+S E Q+ KA ++++ TPGRL + + G + L LS V DEADRM++
Sbjct: 107 GIAYGGVSIEAQQAEFKAGIDVLIATPGRLLDHLRQGA---LNLKRLSVLVFDEADRMLD 163
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E+++++ +P +RQTL+FSAT+
Sbjct: 164 MGFMDEIKAVLKQVP------------------------AQRQTLLFSATL 190
>gi|425769163|gb|EKV07664.1| DEAD/DEAH box helicase, putative [Penicillium digitatum Pd1]
gi|425770721|gb|EKV09185.1| DEAD/DEAH box helicase, putative [Penicillium digitatum PHI26]
Length = 772
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 152/270 (56%), Gaps = 24/270 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E L L++ + R+G+K+PT IQ+A IP A Q +D+IG A TGSGKT AF LP++
Sbjct: 340 SWEESHLPKRLLELVDRVGYKDPTAIQRAAIPIAM-QSRDLIGVAVTGSGKTAAFLLPLL 398
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ A L+E E + P A+++ PTRELA Q+ K+ + + V
Sbjct: 399 VYI-----SALPRLDEN-EWRKNDGPY----AIVLAPTRELAQQIEIEAKKFTQPLGFNV 448
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI+
Sbjct: 449 VSIVGGHSLEEQAFSLRDGAEIIIATPGRLVDCI---ERRMLVLSQCCYVIMDEADRMID 505
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSADFR 411
G + I+D LP+TN + + T ++ Q K RQT++++AT+ A+ R
Sbjct: 506 LGFEEPVNKILDALPVTNEKPDTDEAENSTAMS----QHKYRQTMMYTATMPAAVERIAR 561
Query: 412 KKLKHGSLKLKQSVNGLN-SIETLSERAGM 440
K L+ ++ ++ G+ +++T+ +R M
Sbjct: 562 KYLRRPAII---TIGGVGEAVDTVEQRVEM 588
>gi|295397627|ref|ZP_06807702.1| ATP-dependent RNA helicase DeaD [Aerococcus viridans ATCC 11563]
gi|294974090|gb|EFG49842.1| ATP-dependent RNA helicase DeaD [Aerococcus viridans ATCC 11563]
Length = 509
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 125/230 (54%), Gaps = 49/230 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NE+ L L+++I +GF+E TPIQ IP A +GKD+ G A+TG+GKT AFGLP+++
Sbjct: 3 FNEMNLSKPLLRAIEEMGFEEATPIQAQTIPMAL-EGKDVFGQAQTGTGKTAAFGLPLLE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ E G ++ALII PTRELA+Q + L + K +
Sbjct: 62 KVHE---------------------TGGVQALIIEPTRELAVQTGEELYRLGKFKGIHTT 100
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG S Q +LLK P +V+GTPGR+ +L+ G +++L+ + VLDEAD M++
Sbjct: 101 TVYGGASIGHQIKLLKKNPPVVIGTPGRILDLIKRG---VLKLNNVETLVLDEADEMLKM 157
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++SII LP +RQTL+FSAT+
Sbjct: 158 GFVEDIESIIRELPT------------------------ERQTLLFSATV 183
>gi|326473339|gb|EGD97348.1| ATP-dependent RNA helicase DRS1 [Trichophyton tonsurans CBS 112818]
Length = 700
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 131/255 (51%), Gaps = 49/255 (19%)
Query: 158 AEEELVSEAEISTEFDA-WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIG 216
A E+ V+E++ ++ A + L L +++ + +GF PTPIQ+ IP A GKD++G
Sbjct: 280 APEDQVTESKSTSGAPASFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVAL-LGKDVVG 338
Query: 217 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTREL 274
A TGSGKT AF +PI++RLL Y P+ R I+ PTREL
Sbjct: 339 GAVTGSGKTGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTREL 379
Query: 275 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 334
A+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M
Sbjct: 380 AVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFT 439
Query: 335 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 394
V+ TL VLDEADRM+E+G EL I+ +P K
Sbjct: 440 VD--TLEILVLDEADRMLEDGFAEELNEILTTIP------------------------KS 473
Query: 395 RQTLVFSATIALSAD 409
RQT++FSAT+ S D
Sbjct: 474 RQTMLFSATMTNSVD 488
>gi|312375100|gb|EFR22532.1| hypothetical protein AND_15065 [Anopheles darlingi]
Length = 821
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 142/231 (61%), Gaps = 16/231 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E +++ I ++G+K+PTPIQ+ IP Q +DIIG AETGSGKTLAF +P++
Sbjct: 395 WIESGFPKEILEIIDKVGYKDPTPIQRQAIPIGL-QNRDIIGIAETGSGKTLAFLIPLLT 453
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + K+ E ++ A +G A+I+ PTRELA Q+ + ++ + +R V
Sbjct: 454 WI----QSLPKI------ERQETADQGPY-AIILAPTRELAQQIEEETQKFGTPLGIRTV 502
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ V+DEADRMI+
Sbjct: 503 VVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVMDEADRMIDM 559
Query: 355 GHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 560 GFEPDVQKILEYMPVTNLKPDTEEAEDASKLMENFNTKKKYRQTVMFTATM 610
>gi|255544594|ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 502
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 45/263 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++ L L +++ LG K PTP+Q CIP +GKD++G A+TGSGKT F LPI+
Sbjct: 65 FSNLGLAEWAVRTCKELGMKRPTPVQAHCIPKIL-EGKDVLGLAQTGSGKTATFALPILH 123
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL E+ P G + AL+ITPTRELA Q+ + + + +N+R
Sbjct: 124 RLAED-------------------PYG-IFALVITPTRELAYQLAEQFRALGSCLNLRCA 163
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGGM Q + L ARP +V+ TPGR+ L+ F VLDEADR+++
Sbjct: 164 VVVGGMDKLTQAKTLMARPHVVIATPGRVKVLLEDNPDIPSVFSKTKFLVLDEADRVLDV 223
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
G EL+ + LP K RQTL+FSAT+ + + ++
Sbjct: 224 GFEDELRVVFQCLP------------------------KNRQTLLFSATMTSNLESLLEV 259
Query: 415 KHGSLKLKQSVNGLNSIETLSER 437
++ G +++TL ++
Sbjct: 260 SANKAYFYEAYEGFKTVDTLKQQ 282
>gi|242801276|ref|XP_002483729.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218717074|gb|EED16495.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 803
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 149/268 (55%), Gaps = 20/268 (7%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E L L+ + ++G+ +PTPIQ+A IP A Q +D+IG A TGSGKT +F LP+
Sbjct: 364 SWEESGLPRRLLDLVKQVGYTDPTPIQRAAIPIAL-QSRDLIGVAVTGSGKTASFLLPLF 422
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ E + +E E G A+I+ PTRELA Q+ K+ +K +N V
Sbjct: 423 VYISEL---------PRLDEFEWRKNDGPY-AIILAPTRELAQQIEIEAKKFSKPLNFNV 472
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI+
Sbjct: 473 VSIVGGHSLEEQAYSLRDGAEIIIATPGRLVDCL---ERRMLVLSQCCYVIMDEADRMID 529
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSATI--ALSAD 409
G + I+D LP+TN + + + ++ V R+ RQT++++AT+ A+
Sbjct: 530 LGFEEPVNKILDALPVTNEKPDTEEAEDAQAMSQHVGGRDRRYRQTMMYTATMPSAVERI 589
Query: 410 FRKKLKHGSLKLKQSVNGLNSIETLSER 437
RK L+ ++ +V +++T+ +R
Sbjct: 590 ARKYLRRPAIVTIGNVG--QAVDTVEQR 615
>gi|410900007|ref|XP_003963488.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Takifugu
rubripes]
Length = 802
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 133/232 (57%), Gaps = 17/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 374 WKEYSLPDHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFLIPLLV 432
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K ++ E P A+I+ PTRELA Q+ + + K + +R V
Sbjct: 433 -WITTLPKIDRI------EDSDQGPY----AVILAPTRELAQQIEEETIKFGKPLGIRTV 481
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 482 AVIGGISREDQGFRLRMGCEIVIATPGRLIDVLDN--RYLV-LSRCTYVVLDEADRMIDM 538
Query: 355 GHFRELQSIIDMLPMTNG--SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN E + + + S + K RQT++F+AT+
Sbjct: 539 GFEPDVQKILEFIPVTNQKPDTEEAEDPDKMMMNFESGKNKYRQTVMFTATM 590
>gi|384548306|ref|YP_005737559.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
ED133]
gi|298695355|gb|ADI98577.1| ATP-dependent RNA helicase [Staphylococcus aureus subsp. aureus
ED133]
Length = 487
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 120/214 (56%), Gaps = 48/214 (22%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEK 250
+GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 1 MGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI----------------- 42
Query: 251 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLK 310
EK K +++LI+ PTRELA+QV + L+E ++G V+VV + GGM E+Q + LK
Sbjct: 43 ----EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALK 98
Query: 311 ARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 370
P++VVGTPGR+ + ++ +HTL +LDEAD M+ G +++ I+D +P
Sbjct: 99 KGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNMGFIDDMRFIMDKIPAV 155
Query: 371 NGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+RQT++FSAT+
Sbjct: 156 -----------------------QRQTMLFSATM 166
>gi|259047319|ref|ZP_05737720.1| cold-shock DEAD box protein A [Granulicatella adiacens ATCC 49175]
gi|259036015|gb|EEW37270.1| cold-shock DEAD box protein A [Granulicatella adiacens ATCC 49175]
Length = 520
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 132/251 (52%), Gaps = 53/251 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NEL L L++SI ++GF+E TPIQ IP A QG D+IG A+TG+GKT AFGLP++Q
Sbjct: 14 FNELGLDSALLESIEKMGFEEATPIQAQTIPKAL-QGLDVIGQAQTGTGKTAAFGLPMLQ 72
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + K G ++ L+I PTRELA+Q + L + + +RV
Sbjct: 73 KI--DPSKKG------------------VQGLVIAPTRELAIQTQEELFRLGRDKKIRVQ 112
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK P++VVGTPGRL + +S + ++L + VLDEAD M+
Sbjct: 113 AVYGGADINRQIRQLKENPQIVVGTPGRLLDHIS---RRTLKLGAVETLVLDEADEMLNM 169
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++SII +P + RQTL+FSAT+ +
Sbjct: 170 GFLEDIESIIKQVP------------------------ENRQTLLFSATMPDDIKRIGVQ 205
Query: 410 FRKKLKHGSLK 420
F K +H +K
Sbjct: 206 FMKDPEHVRIK 216
>gi|352684524|ref|YP_004896509.1| DEAD/DEAH box helicase [Acidaminococcus intestini RyC-MR95]
gi|350279179|gb|AEQ22369.1| DEAD/DEAH helicase [Acidaminococcus intestini RyC-MR95]
Length = 537
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 134/244 (54%), Gaps = 52/244 (21%)
Query: 161 ELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAET 220
E ++E I+T + +L L ++ ++ +GF+EP+PIQK IP A +G DIIG A+T
Sbjct: 4 EPMTEPTITT----FEDLNLDKKILSALKDMGFEEPSPIQKGAIPLAL-EGDDIIGQAQT 58
Query: 221 GSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTD 280
G+GKT AFG+PI+Q + E+ H++AL+++PTREL +QV +
Sbjct: 59 GTGKTAAFGIPIIQSIDEKNR--------------------HVQALVMSPTRELCIQVAE 98
Query: 281 HLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTL 340
+ ++ + V V+P+ GG E+Q R LK ++V+GTPGRL + + G L +H
Sbjct: 99 EISKIGRLKRVHVLPVYGGQPIERQIRSLKHGVQVVIGTPGRLLDHLRRGTISLDHIH-- 156
Query: 341 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVF 400
F VLDEAD M++ G ++++II +P +RQT++F
Sbjct: 157 -FLVLDEADEMLDMGFIEDIETIIKEVP------------------------PERQTMLF 191
Query: 401 SATI 404
SAT+
Sbjct: 192 SATM 195
>gi|24374899|ref|NP_718942.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
gi|24349603|gb|AAN56386.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
Length = 409
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 130/231 (56%), Gaps = 42/231 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L L+ L+ ++ LG+++PTPIQ IPA + +D++ A+TG+GKT AF LPI+
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTK-QDVMAGAQTGTGKTAAFALPIL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q L M + + + A K +RAL++ PTRELALQV + AKG ++RV
Sbjct: 61 QLL---------MADNQSDHAAK-----AIRALVLVPTRELALQVQQSFVKYAKGTDIRV 106
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
GG+S E Q+ + A ++++ TPGRL + + G +L +L+TL F DEADRM++
Sbjct: 107 GIAYGGVSIEAQQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVF---DEADRMLD 163
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E+Q+++ +P +RQTL+FSAT+
Sbjct: 164 MGFMDEIQAVLKQVP------------------------AQRQTLLFSATL 190
>gi|187929488|ref|YP_001899975.1| DEAD/DEAH box helicase [Ralstonia pickettii 12J]
gi|404396603|ref|ZP_10988397.1| hypothetical protein HMPREF0989_03294 [Ralstonia sp. 5_2_56FAA]
gi|187726378|gb|ACD27543.1| DEAD/DEAH box helicase domain protein [Ralstonia pickettii 12J]
gi|348613693|gb|EGY63272.1| hypothetical protein HMPREF0989_03294 [Ralstonia sp. 5_2_56FAA]
Length = 493
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 48/258 (18%)
Query: 169 STEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
S FD++ LHP +++++ G+ +PTPIQ A IP G D++GAA+TG+GKT F
Sbjct: 12 SVTFDSFG---LHPDVLRALTESGYTKPTPIQAAAIPVVT-AGHDVMGAAQTGTGKTAGF 67
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAK 287
LPI+ LL + + +P H +RALI+TPTRELA QV D++ + AK
Sbjct: 68 SLPIIHNLLPDANTSA-------------SPARHPVRALILTPTRELADQVYDNVAKYAK 114
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+R + GG+ Q L+ E++V TPGRL + + ++ V L + VLDE
Sbjct: 115 YTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHV---QQRSVNLSQVRMLVLDE 171
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADRM++ G +LQ II++LP RQTL+FSAT +
Sbjct: 172 ADRMLDMGFLPDLQRIINLLP------------------------AHRQTLLFSATFSPE 207
Query: 408 ADFRKKLKHGSLKLKQSV 425
K+L L+ Q++
Sbjct: 208 I---KRLAASYLRHPQTI 222
>gi|432866547|ref|XP_004070857.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Oryzias
latipes]
Length = 802
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 136/233 (58%), Gaps = 19/233 (8%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 375 WKEYALPAHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFLIPLLV 433
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K ++ E P A+I+ PTRELA Q+ + + K + +R V
Sbjct: 434 -WITTLPKIDRI------EDSDQGPY----AVILAPTRELAQQIEEETIKFGKPLGIRTV 482
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 483 AVIGGISREDQGFKLRMGCEIVIATPGRLIDVLEN--RYLV-LGRCTYVVLDEADRMIDM 539
Query: 355 GHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN ++E + + T + S + K RQT++F+AT+
Sbjct: 540 GFEPDVQKILEYIPVTNQKPDTDEAEDPEKMT-MNFESGKHKYRQTVMFTATM 591
>gi|374336577|ref|YP_005093264.1| DEAD/DEAH box helicase [Oceanimonas sp. GK1]
gi|372986264|gb|AEY02514.1| DEAD/DEAH box helicase [Oceanimonas sp. GK1]
Length = 458
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 148/269 (55%), Gaps = 50/269 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ L L+ L+++I+ G+ +PTPIQ+ IP +G D++ A+TG+GKT FGLP++
Sbjct: 2 SFASLGLNDNLVQAIHECGYTQPTPIQQQAIPLVL-KGGDLLAGAQTGTGKTAGFGLPML 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
QRL E + + A AP +RAL++TPTRELA QV ++L+ AK ++R
Sbjct: 61 QRLSETKAR---------PLANGRAP---VRALVLTPTRELAAQVEENLRAYAKHTDLRT 108
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ + GG+S Q + L + ++VV TPGRL + +S + ++L + VLDEADRM++
Sbjct: 109 LVMFGGVSINPQMKALGRKVDIVVATPGRLLDHVS---QRSIDLSRVEMLVLDEADRMLD 165
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 408
G R+++ I+ +LP K+RQ L+FSAT + L+
Sbjct: 166 MGFIRDIRRILALLP------------------------KQRQNLLFSATFSDEIKTLAE 201
Query: 409 DFRKKLKHGSLKLKQSVNGLNSIETLSER 437
D + +H + + + + ET+S+R
Sbjct: 202 DLLHQPEHIEVARRNA-----TAETISQR 225
>gi|354605411|ref|ZP_09023399.1| hypothetical protein HMPREF9450_02314 [Alistipes indistinctus YIT
12060]
gi|353346953|gb|EHB91231.1| hypothetical protein HMPREF9450_02314 [Alistipes indistinctus YIT
12060]
Length = 400
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 128/246 (52%), Gaps = 49/246 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NEL + +++++ G+ EPTPIQ+ IP +GKDI G A+TG+GKT AF +PI+Q
Sbjct: 3 FNELNIAEPILRAVCEKGYNEPTPIQEQAIPVVL-RGKDIFGIAQTGTGKTAAFAIPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPK---------GH-------LRALIITPTRELALQV 278
LL++ E+ E A P H +RALI+TPTRELALQ+
Sbjct: 62 HLLKKNEQ-----NIAAEPASTNEPGRARRNRRGRSHGKKEYRAIRALILTPTRELALQI 116
Query: 279 TDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH 338
D + K +R I GG+ Q L+ ++++ TPGRL +L+ E V L
Sbjct: 117 NDCFTDYGKYTGLRHTAIFGGVKQHPQTEKLRQGVDILIATPGRLLDLIGQDE---VRLE 173
Query: 339 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTL 398
+L+ FVLDEADRM++ G +++ ++ MLP +RQTL
Sbjct: 174 SLTHFVLDEADRMLDMGFIADIRRLLPMLP------------------------AERQTL 209
Query: 399 VFSATI 404
FSAT+
Sbjct: 210 FFSATM 215
>gi|300772766|ref|ZP_07082636.1| ATP-dependent RNA helicase RhlE [Sphingobacterium spiritivorum ATCC
33861]
gi|300761069|gb|EFK57895.1| ATP-dependent RNA helicase RhlE [Sphingobacterium spiritivorum ATCC
33861]
Length = 435
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 127/230 (55%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L ++K++ G++ PTPIQ+ IP Q KD++ A+TG+GKT AF +PI+Q
Sbjct: 20 FKDLKLIAPILKALDASGYQNPTPIQEQAIPII-FQRKDLLACAQTGTGKTAAFAIPILQ 78
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L +EK + +R L++TPTRELA+Q+ ++ +K + +R +
Sbjct: 79 MLTYSKEKTAQ---------------KRIRTLVLTPTRELAIQIKENFDAYSKELPIRNL 123
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + Q L+ ++++ TPGRL +L + G ++L L +FVLDEADRM++
Sbjct: 124 VIYGGVGQQPQRDALRKGIDILIATPGRLLDLYNQG---FIDLKQLEYFVLDEADRMLDM 180
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ +I ++P KKRQTL+FSAT+
Sbjct: 181 GFIHDVKKVISIIP------------------------KKRQTLLFSATM 206
>gi|268529640|ref|XP_002629946.1| Hypothetical protein CBG03667 [Caenorhabditis briggsae]
Length = 565
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 126/249 (50%), Gaps = 49/249 (19%)
Query: 156 DDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDII 215
+D + +SE ++T ++EL + + + + + K TP+Q ACIP G DI+
Sbjct: 78 NDPQPFQISEDNMTTR--KFSELGVSSWITQQLQTMHIKTATPVQAACIPRIL-DGSDIL 134
Query: 216 GAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELA 275
G A TG+GKTLAF +PI+Q+L P G + ALI+TPTRELA
Sbjct: 135 GCARTGTGKTLAFAIPILQKL-------------------SIDPYG-IYALILTPTRELA 174
Query: 276 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 335
Q+ D V K I ++ IVGG S Q R L RP +VV TPGRL +L+ + +
Sbjct: 175 FQIADQFTAVGKPITLKCSVIVGGRSLIHQARELSERPHIVVATPGRLTDLIESDPEVIA 234
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
+ + FFVLDEADRM+E + +L+ I +P +KR
Sbjct: 235 K--KIQFFVLDEADRMLEGQYNDQLKPIFQSIP------------------------EKR 268
Query: 396 QTLVFSATI 404
QTL+ SATI
Sbjct: 269 QTLLLSATI 277
>gi|399219035|emb|CCF75922.1| unnamed protein product [Babesia microti strain RI]
Length = 635
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 138/242 (57%), Gaps = 16/242 (6%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W+E +L L++++ G+ +PTPIQ IP A +D+IG AETGSGKT AF LP++
Sbjct: 225 SWDESKLPKELLEAVKVAGYNKPTPIQMQAIPIALEM-RDLIGIAETGSGKTAAFVLPML 283
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ K+ +L+++ + Y+ L++ P+RELA+Q+ D ++ A R
Sbjct: 284 AYV-----KSLPLLDDETGQDGPYS-------LVLAPSRELAIQIYDETRKFAAYCECRA 331
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ IVGG S E Q L+ E+++GTPGR+ + + ++ + L+ ++ +LDEADRM++
Sbjct: 332 IVIVGGRSVESQAFELRRGTEIIIGTPGRIKDCL---DRAYIVLNQCNYVILDEADRMVD 388
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 413
G + I+D +P TN E + + + + R+ R T +FSAT+++ +K
Sbjct: 389 MGFEEVVNDILDKIPSTNLKAEDEDTAYEQELMSKAGHRRYRITQMFSATMSIDRLMKKY 448
Query: 414 LK 415
L+
Sbjct: 449 LR 450
>gi|299470469|emb|CBN78461.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1012
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 144/249 (57%), Gaps = 19/249 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L +M++I LG+++P+PIQ+ IP + +DIIG AETGSGKT AFG+P++
Sbjct: 578 WEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMER-RDIIGIAETGSGKTAAFGIPMIA 636
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L +AG ++ A +G L ALI+ PTRELA+Q+ + K+ K + V
Sbjct: 637 YILSL--EAGMR--------DRVADQGPL-ALIMAPTRELAIQIEEECKKFCKFAGLNTV 685
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG E Q L+ E+++GTPGRL + + EKH + L+ ++ VLDEADRMI+
Sbjct: 686 CVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCV---EKHYLVLNQCNYVVLDEADRMIDM 742
Query: 355 GHFRELQSIIDMLPMTNGSNEGQ--SEQTQTCVTVSSLQRKKRQTLVFSATI--ALSADF 410
G ++ ++++ + T +++ + +Q + S R T +FSAT+ A+
Sbjct: 743 GFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMA 802
Query: 411 RKKLKHGSL 419
+K L+H ++
Sbjct: 803 KKYLRHPAI 811
>gi|430749671|ref|YP_007212579.1| DNA/RNA helicase [Thermobacillus composti KWC4]
gi|430733636|gb|AGA57581.1| DNA/RNA helicase, superfamily II [Thermobacillus composti KWC4]
Length = 517
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 136/250 (54%), Gaps = 53/250 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E L P +++++ +GF+E TPIQ IP A G D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFGLEPKVLQAVTEMGFEESTPIQAKAIPIAM-SGADLIGQAQTGTGKTAAFGIPLIS 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ E E+ + AL++TPTRELA+QV D L ++A+ +R +
Sbjct: 63 KIPPEEER--------------------IVALVMTPTRELAIQVADELGKLARYKGIRTL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK +P++++GTPGRL + ++ + + L + VLDEAD M++
Sbjct: 103 PIYGGQDIGRQIRALKKKPQIIIGTPGRLLDHIN---RKTIRLDDVQTVVLDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++ +I+ ++P ++RQT++FSAT+ L+
Sbjct: 160 GFMEDITTILSLVP------------------------EERQTMLFSATMPPNIQKLAQQ 195
Query: 410 FRKKLKHGSL 419
F + +H S+
Sbjct: 196 FLRNPEHVSV 205
>gi|300088260|ref|YP_003758782.1| DEAD/DEAH box helicase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527993|gb|ADJ26461.1| DEAD/DEAH box helicase domain protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 429
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 126/241 (52%), Gaps = 48/241 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ LHP + + G+ EPTPIQ IP A QG+D+IG A+TG+GKT AF LP++Q
Sbjct: 3 FENFDLHPAVRDGVKSAGYTEPTPIQAQAIPPAL-QGRDLIGLAQTGTGKTTAFVLPMLQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RLL P+G LR LI++PTRELA Q+ D +K +++ +R +
Sbjct: 62 RLLR-------------------GPRGKLRGLIVSPTRELAEQIYDSVKTLSQHTGLRAM 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ E Q+ L+A ++V+ PGRL + + G ++ + V+DEADRM +
Sbjct: 103 AIYGGVGMEPQKAKLRAGTDIVIACPGRLLDHVWQGT---IDFDDVEMLVIDEADRMFDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
G +++ I+ L R +RQTL+FSAT + AD RK +
Sbjct: 160 GFLPDIRKIL-----------------------RCLVRPERQTLLFSAT--MPADVRKLV 194
Query: 415 K 415
+
Sbjct: 195 Q 195
>gi|358392056|gb|EHK41460.1| hypothetical protein TRIATDRAFT_162817, partial [Trichoderma
atroviride IMI 206040]
Length = 760
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 118/228 (51%), Gaps = 48/228 (21%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 243
+M+ I +GF +PTPIQ IP A GKD++G A TGSGKT AF LPI++RLL
Sbjct: 256 IMRGITAVGFTKPTPIQAKTIPIAL-MGKDVVGGAVTGSGKTAAFVLPILERLL------ 308
Query: 244 GKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMS 301
Y PK R +I+TPTRELA+Q ++A +++ VGG+S
Sbjct: 309 -------------YRPKKIPTTRVVILTPTRELAIQCHAVATKLAAHTDIKFTLAVGGLS 355
Query: 302 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 361
+ QE L+ RP++++ TPGR + M V+ T+ VLDEADRM+E+G EL
Sbjct: 356 LKAQETELRLRPDVIIATPGRFIDHMRNSASFSVD--TVEILVLDEADRMLEDGFADELN 413
Query: 362 SIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
I+ LP K RQT++FSAT+ + D
Sbjct: 414 EILTTLP------------------------KSRQTMLFSATMTSTVD 437
>gi|302414960|ref|XP_003005312.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Verticillium
albo-atrum VaMs.102]
gi|261356381|gb|EEY18809.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Verticillium
albo-atrum VaMs.102]
Length = 510
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 130/231 (56%), Gaps = 17/231 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+E L L+ ++R+G+ +PTPIQ+A IP A Q +D+IG A TGSGKT +F LP++
Sbjct: 219 WDESGLPGRLLDIVHRVGYNDPTPIQRAAIPIAL-QARDLIGVAVTGSGKTASFLLPLLV 277
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + L GE + P G LI+ PTREL Q+ + A + RVV
Sbjct: 278 YISD--------LPPLGEMNKNDGPYG----LILAPTRELVQQIESEANKFATPLGFRVV 325
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 326 SIVGGHSLEEQAFALRNGAEIIVATPGRLVDCI---ERRLLVLGQCCYVIMDEADRMIDL 382
Query: 355 GHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G + I+D LP++N + ++E Q + + RQT++++AT+
Sbjct: 383 GFEEPVNKILDALPVSNEKPDTDEAENAQLMKRYLGGKDRYRQTMMYTATM 433
>gi|83766036|dbj|BAE56179.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 856
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 130/255 (50%), Gaps = 49/255 (19%)
Query: 158 AEEELVSE---AEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDI 214
A EE SE AE+S + ++ E L +++ + + F PTPIQ+ IP A GKDI
Sbjct: 322 APEEQTSEQSAAELSKK--SFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALL-GKDI 378
Query: 215 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 274
+G+A TGSGKT AF +PI++RLL K P R I+ PTREL
Sbjct: 379 VGSAVTGSGKTAAFVVPILERLLFRPRKV---------------PTS--RVAILMPTREL 421
Query: 275 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 334
A+Q + ++A ++ +VGG S +QE +LK RP++++ TPGR + M
Sbjct: 422 AVQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFT 481
Query: 335 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 394
V+ TL VLDEADRM+E+G EL I+ +P K
Sbjct: 482 VD--TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KS 515
Query: 395 RQTLVFSATIALSAD 409
RQT++FSAT+ S D
Sbjct: 516 RQTMLFSATMTDSVD 530
>gi|410458653|ref|ZP_11312411.1| DEAD/DEAH box helicase [Bacillus azotoformans LMG 9581]
gi|409931248|gb|EKN68234.1| DEAD/DEAH box helicase [Bacillus azotoformans LMG 9581]
Length = 501
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 124/230 (53%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL + +MKSI +GF+E TPIQ IP + QGKD+IG A+TG+GKT AFG+P+++
Sbjct: 4 FHELGISEKIMKSIQAMGFEEATPIQSETIPVSL-QGKDVIGQAQTGTGKTAAFGIPMIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ ++ +++ PTRELA+QV + L + + V+ +
Sbjct: 63 KI--------------------DIKNTFIQGIVVAPTRELAIQVAEELNRIGQFKGVKAL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK RP+++VGTPGRL + M+ + + L + VLDEAD M+
Sbjct: 103 PIYGGQDINRQIRALKNRPQIIVGTPGRLMDHMN---RKTIRLQNIQVVVLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P + RQTL+FSAT+
Sbjct: 160 GFIEDIEAILKEVP------------------------EVRQTLLFSATM 185
>gi|311280327|ref|YP_003942558.1| DEAD/DEAH box helicase [Enterobacter cloacae SCF1]
gi|308749522|gb|ADO49274.1| DEAD/DEAH box helicase domain protein [Enterobacter cloacae SCF1]
Length = 446
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 134/232 (57%), Gaps = 42/232 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L L+P +++++ G++EPTPIQK IPA +G+D++ +A+TG+GKT F LP++
Sbjct: 2 SFDTLGLNPEILRAVAEQGYREPTPIQKQAIPAVL-EGRDLMASAQTGTGKTAGFTLPLL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
QRL++ A KG +RALI+TPTRELA QV ++++E +K +N+R
Sbjct: 61 QRLVQNEPHA------KGRRP--------IRALILTPTRELAAQVGENVREYSKYLNIRS 106
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ + GG+S Q L+ +++V TPGRL +L ++ ++L ++ VLDEADRM++
Sbjct: 107 LVVFGGVSINPQMMKLRGGVDILVATPGRLLDLE---HQNALKLDSVEVLVLDEADRMLD 163
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +++ ++ LP KRQ L+FSAT +
Sbjct: 164 MGFIHDIRRVLAKLP------------------------AKRQNLLFSATFS 191
>gi|418575592|ref|ZP_13139742.1| putative ATP-dependent RNA helicase [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379325994|gb|EHY93122.1| putative ATP-dependent RNA helicase [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 487
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 123/209 (58%), Gaps = 35/209 (16%)
Query: 191 LGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEK 250
+GF E TPIQK IP A +GKD++G A+TG+GKT AFG+P++
Sbjct: 1 MGFNEATPIQKESIPLAL-EGKDVLGQAQTGTGKTGAFGIPLI----------------- 42
Query: 251 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLK 310
EK A + +++LI+ PTRELA+QV + LK AKG N++VV + GGM ++Q + LK
Sbjct: 43 ----EKVADQEGVQSLILAPTRELAMQVAESLKAFAKGQNIQVVTVFGGMPIDRQIKALK 98
Query: 311 ARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 370
P++VVGTPGR+ + ++ ++HTL +LDEAD M+ G +++ I+D +P
Sbjct: 99 KGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNMGFIDDMKFIMDKIP-- 153
Query: 371 NGSNEGQSEQTQTCVTVSSLQRKKRQTLV 399
+EQ QT + S+ K QTLV
Sbjct: 154 -------AEQRQTML-FSATMPKAIQTLV 174
>gi|423216420|ref|ZP_17202944.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
gi|392690791|gb|EIY84045.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
Length = 374
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 130/230 (56%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++K+I G+ PTPIQ+ IP A + +DI+G A+TG+GKT +F +PI+Q
Sbjct: 3 FKELNITEPILKAIGEKGYTVPTPIQEKAIPPALAK-RDILGCAQTGTGKTASFAIPIIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L ++E A +G ++ALI+TPTRELALQ+++ + + +K +R
Sbjct: 62 HLQLDKEAA----RRQG-----------IKALILTPTRELALQISECIDDYSKHTRIRHG 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG++ Q LL+ +++V TPGRL +LMS G H L T+ +FVLDEADRM++
Sbjct: 107 VIFGGVNQRPQVDLLRKGIDILVATPGRLLDLMSQGHIH---LDTIQYFVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+ LP K++QTL FSAT+
Sbjct: 164 GFIHDIKRILPKLP------------------------KEKQTLFFSATM 189
>gi|381204134|ref|ZP_09911205.1| ATP-dependent RNA helicase [SAR324 cluster bacterium JCVI-SC
AAA005]
Length = 556
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 129/235 (54%), Gaps = 43/235 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E+ L +++++ GF EPTPIQ+ IP D+IG A+TG+GKT AFG+P+++
Sbjct: 3 FQEMGLSDAVLRALVESGFSEPTPIQEQVIPLQIRHN-DVIGQAQTGTGKTAAFGIPLIE 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL +++ K + ALI+TPTRELA QVTD L+ + ++ +V
Sbjct: 62 RL---------------SPRQRHDSKHTMDALILTPTRELASQVTDELRRIGLYKSLSIV 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S E+Q R L+ ++VGTPGR+ + +S G ++L + FVLDEAD M++
Sbjct: 107 TIYGGVSIEQQIRTLRRGTNIIVGTPGRVLDHLSRGT---IDLSGVRHFVLDEADEMVDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
G ++Q+I+ LP +KRQ L+FSAT++ D
Sbjct: 164 GFIEDIQTIMQSLP------------------------EKRQILLFSATMSPEID 194
>gi|295085349|emb|CBK66872.1| Superfamily II DNA and RNA helicases [Bacteroides xylanisolvens
XB1A]
Length = 374
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 130/230 (56%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++K+I G+ PTPIQ+ IP A + +DI+G A+TG+GKT +F +PI+Q
Sbjct: 3 FKELNITEPILKAIGEKGYTVPTPIQEKAIPPALAK-RDILGCAQTGTGKTASFAIPIIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L ++E A +G ++ALI+TPTRELALQ+++ + + +K +R
Sbjct: 62 HLQLDKEAA----RRQG-----------IKALILTPTRELALQISECIDDYSKHTRIRHG 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG++ Q LL+ +++V TPGRL +LMS G H L T+ +FVLDEADRM++
Sbjct: 107 VIFGGVNQRPQVDLLRKGIDILVATPGRLLDLMSQGHIH---LDTIQYFVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+ LP K++QTL FSAT+
Sbjct: 164 GFIHDIKRILPKLP------------------------KEKQTLFFSATM 189
>gi|367014751|ref|XP_003681875.1| hypothetical protein TDEL_0E04210 [Torulaspora delbrueckii]
gi|359749536|emb|CCE92664.1| hypothetical protein TDEL_0E04210 [Torulaspora delbrueckii]
Length = 740
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 124/231 (53%), Gaps = 45/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+N L L ++K + LG+ P+PIQ A IP A GKDII A TGSGKT AF +PI++
Sbjct: 221 FNSLSLSRPVLKGLGDLGYTRPSPIQSATIPIAL-LGKDIIAGAVTGSGKTAAFMIPIIE 279
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RLL K A R +++TPTRELA+QV+D K++ K ++
Sbjct: 280 RLL-----------------YKPAKIASTRVIVLTPTRELAIQVSDVAKKLGKYVSGLTF 322
Query: 295 PI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ VGG++ +QE+ LKARP++VV TPGR + + V+ ++ V+DEADRM+E
Sbjct: 323 GLAVGGLNLRQQEQSLKARPDIVVATPGRFIDHIRNSASFNVD--SVEVLVIDEADRMLE 380
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G EL I+ +LP KRQTL+FSAT+
Sbjct: 381 EGFQEELNEILSLLP------------------------SKRQTLLFSATM 407
>gi|262409233|ref|ZP_06085777.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645798|ref|ZP_06723482.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CC 2a]
gi|294809471|ref|ZP_06768175.1| ATP-dependent RNA helicase RhlE [Bacteroides xylanisolvens SD CC
1b]
gi|262352980|gb|EEZ02076.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638877|gb|EFF57211.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CC 2a]
gi|294443343|gb|EFG12106.1| ATP-dependent RNA helicase RhlE [Bacteroides xylanisolvens SD CC
1b]
Length = 374
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 130/230 (56%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++K+I G+ PTPIQ+ IP A + +DI+G A+TG+GKT +F +PI+Q
Sbjct: 3 FKELNITEPILKAIGEKGYTVPTPIQEKAIPPALAK-RDILGCAQTGTGKTASFAIPIIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L ++E A +G ++ALI+TPTRELALQ+++ + + +K +R
Sbjct: 62 HLQLDKEAA----RRQG-----------IKALILTPTRELALQISECIDDYSKHTRIRHG 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG++ Q LL+ +++V TPGRL +LMS G H L T+ +FVLDEADRM++
Sbjct: 107 VIFGGVNQRPQVDLLRKGIDILVATPGRLLDLMSQGHIH---LDTIQYFVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+ LP K++QTL FSAT+
Sbjct: 164 GFIHDIKRILPKLP------------------------KEKQTLFFSATM 189
>gi|311104225|ref|YP_003977078.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
gi|310758914|gb|ADP14363.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
Length = 493
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 124/232 (53%), Gaps = 42/232 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + LHPLL++SI G+ PTPIQ IP +G+D++GAA+TG+GKT AF LPI+
Sbjct: 19 FTDFGLHPLLLQSIAETGYTTPTPIQAQAIPVVV-EGRDVMGAAQTGTGKTAAFTLPILH 77
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
RL+ + +P H +RALI+TPTRELA QV + +K +K +R
Sbjct: 78 RLMPLANTSA-------------SPARHPVRALILTPTRELADQVYESVKRYSKQTPLRS 124
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG+ Q+ L+ E++V TPGRL + + E+ V L + VLDEADRM++
Sbjct: 125 AVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHV---EQKNVNLSQVGILVLDEADRMLD 181
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +L+ II +LP +RQ L+FSAT +
Sbjct: 182 MGFLPDLERIIRLLP------------------------AQRQGLLFSATFS 209
>gi|227825056|ref|ZP_03989888.1| DEAD/DEAH helicase [Acidaminococcus sp. D21]
gi|226905555|gb|EEH91473.1| DEAD/DEAH helicase [Acidaminococcus sp. D21]
Length = 532
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 133/242 (54%), Gaps = 52/242 (21%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
++E I+T + +L L ++ ++ +GF+EP+PIQK IP A +G DIIG A+TG+
Sbjct: 1 MTEPTITT----FEDLNLDKKILSALKDMGFEEPSPIQKGAIPLAL-EGDDIIGQAQTGT 55
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 282
GKT AFG+PI+Q + E+ H++AL+++PTREL +QV + +
Sbjct: 56 GKTAAFGIPIIQSIDEKNR--------------------HVQALVMSPTRELCIQVAEEI 95
Query: 283 KEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSF 342
++ + V V+P+ GG E+Q R LK ++V+GTPGRL + + G L +H F
Sbjct: 96 SKIGRLKRVHVLPVYGGQPIERQIRSLKHGVQVVIGTPGRLLDHLRRGTISLDHIH---F 152
Query: 343 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSA 402
VLDEAD M++ G ++++II +P +RQT++FSA
Sbjct: 153 LVLDEADEMLDMGFIEDIETIIKEVP------------------------PERQTMLFSA 188
Query: 403 TI 404
T+
Sbjct: 189 TM 190
>gi|418595150|ref|ZP_13158775.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21342]
gi|374402283|gb|EHQ73315.1| DEAD/DEAH box helicase [Staphylococcus aureus subsp. aureus 21342]
Length = 506
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 132/246 (53%), Gaps = 53/246 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++G V+V
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVG 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQQ 195
Query: 410 FRKKLK 415
F K K
Sbjct: 196 FMKSPK 201
>gi|398343323|ref|ZP_10528026.1| DEAD/DEAH box helicase [Leptospira inadai serovar Lyme str. 10]
Length = 554
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 47/232 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L KSI + GF E TPIQ+ IP +GKDI G A+TG+GKT+AF +PI+
Sbjct: 3 FEELNLEPSLQKSIEKAGFVELTPIQEKAIPHGI-EGKDITGLAQTGTGKTVAFLVPIIH 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L + K + LI+ PTREL +Q+++ +++ K + RVV
Sbjct: 62 NILTKGIKG-------------------VSTLILAPTRELVIQISEEAEKLLKYTDYRVV 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI+GG + Q R L+A ++V TPGRL +L GG +L + FFVLDEADRM++
Sbjct: 103 PIIGGTDYKSQNRDLQALNGIIVATPGRLIDLARGGT---ADLDKVEFFVLDEADRMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 406
G +++ ++ C R ++QTL+FSAT+++
Sbjct: 160 GFINDIRWLL-----------------HKC-------RNRKQTLLFSATLSV 187
>gi|440288419|ref|YP_007341184.1| DNA/RNA helicase, superfamily II [Enterobacteriaceae bacterium
strain FGI 57]
gi|440047941|gb|AGB78999.1| DNA/RNA helicase, superfamily II [Enterobacteriaceae bacterium
strain FGI 57]
Length = 463
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 141/251 (56%), Gaps = 47/251 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L L P ++++I LG++EPTPIQ+ IPA QG+D++ +A+TG+GKT F LP++
Sbjct: 2 SFDSLGLSPEILRAIVELGYREPTPIQQQAIPAVL-QGRDLMASAQTGTGKTAGFTLPLL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q L+ + A KG +RALI+TPTRELA Q+ ++++E ++ +N+R
Sbjct: 61 QHLITTQPHA------KGRRP--------VRALILTPTRELAAQIGENVREYSQYLNIRS 106
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ + GG+S Q L+ +++V TPGRL +L ++ V+L + VLDEADRM++
Sbjct: 107 LVVFGGVSINPQMMKLRGGVDVLVATPGRLLDL---EHQNAVKLDGIEILVLDEADRMLD 163
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR-- 411
G +++ ++ LP KRQ L+FSAT S D +
Sbjct: 164 MGFIHDIRRVLAKLP------------------------AKRQNLLFSAT--FSDDIKAL 197
Query: 412 -KKLKHGSLKL 421
+KL H L++
Sbjct: 198 AEKLLHNPLEI 208
>gi|381182260|ref|ZP_09891076.1| ATP-dependent RNA helicase DeaD [Listeriaceae bacterium TTU M1-001]
gi|380317854|gb|EIA21157.1| ATP-dependent RNA helicase DeaD [Listeriaceae bacterium TTU M1-001]
Length = 502
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 131/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++E L ++KS+ R+GF+E TPIQ+ IP GKD+IG A+TG+GKT AFGLP++Q
Sbjct: 4 FSEFGLDEKIVKSVERMGFEEATPIQEKTIPIGL-AGKDLIGQAQTGTGKTAAFGLPMIQ 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ ++ G ++ALII PTRELA+QV++ L +++ +VRV+
Sbjct: 63 KIDQK--------------------NGDVQALIIAPTRELAIQVSEELYKLSYDKHVRVL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK +P++VVGTPGR+ + ++ + ++L + VLDEAD M+
Sbjct: 103 AVYGGSDISRQIRSLKKKPQIVVGTPGRILDHIN---RRTLKLDNVQTLVLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++SI+ +P +RQTL+FSAT+
Sbjct: 160 GFIDDIESILKEVP------------------------SERQTLLFSATM 185
>gi|373108568|ref|ZP_09522850.1| hypothetical protein HMPREF9712_00443 [Myroides odoratimimus CCUG
10230]
gi|423129762|ref|ZP_17117437.1| hypothetical protein HMPREF9714_00837 [Myroides odoratimimus CCUG
12901]
gi|371646685|gb|EHO12196.1| hypothetical protein HMPREF9712_00443 [Myroides odoratimimus CCUG
10230]
gi|371647785|gb|EHO13280.1| hypothetical protein HMPREF9714_00837 [Myroides odoratimimus CCUG
12901]
Length = 415
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 133/232 (57%), Gaps = 43/232 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L+ ++++I LG+KEPTPIQ+ IP + KD+IG A+TG+GKT AF +PI+
Sbjct: 3 FEDLQLNKNILRAIDELGYKEPTPIQQKAIPFILAE-KDLIGCAQTGTGKTAAFAMPIIH 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L K G +K ++A + LI+TPTRELA+Q+ D+ ++ AK NV +
Sbjct: 62 YL----HKLGNT--KKAKKA---------KVLIVTPTRELAVQIGDNFEKYAKYTNVTYI 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGMS + Q L ++++GTPGRL +L +KHL +L L F VLDEAD M++
Sbjct: 107 TLYGGMSIKPQIEQLNKGADVIIGTPGRLLDLYK--QKHL-DLDHLHFLVLDEADLMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 406
G +++ +I + P SN RQTL+FSAT+ L
Sbjct: 164 GFIDDVKKLIQLTP----SN--------------------RQTLLFSATMPL 191
>gi|84684138|ref|ZP_01012040.1| hypothetical protein 1099457000262_RB2654_16856 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667891|gb|EAQ14359.1| hypothetical protein RB2654_16856 [Rhodobacterales bacterium
HTCC2654]
Length = 439
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 115/189 (60%), Gaps = 19/189 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+N+L L P L+ ++ G++ P+PIQ IP A G D++G A+TG+GKT AFGLP++Q
Sbjct: 4 FNDLGLDPKLLAAVKAAGYQTPSPIQVQAIPHAL-AGTDVLGLAQTGTGKTAAFGLPLVQ 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+LL +K PKG +RAL++ PTREL Q+ D+L KG +++V
Sbjct: 63 QLLGGHDK--------------REPKG-VRALVLAPTRELVNQIADNLIAYVKGTHIKVN 107
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG S KQ ++L +++V TPGRL +LM ++ V L T +F VLDEAD+M++
Sbjct: 108 TVVGGKSINKQVQILAKGTDILVATPGRLIDLM---DRKAVRLDTATFLVLDEADQMLDM 164
Query: 355 GHFRELQSI 363
G L+ I
Sbjct: 165 GFIHALRRI 173
>gi|423133418|ref|ZP_17121065.1| hypothetical protein HMPREF9715_00840 [Myroides odoratimimus CIP
101113]
gi|423329024|ref|ZP_17306831.1| hypothetical protein HMPREF9711_02405 [Myroides odoratimimus CCUG
3837]
gi|371648682|gb|EHO14169.1| hypothetical protein HMPREF9715_00840 [Myroides odoratimimus CIP
101113]
gi|404603424|gb|EKB03078.1| hypothetical protein HMPREF9711_02405 [Myroides odoratimimus CCUG
3837]
Length = 415
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 133/232 (57%), Gaps = 43/232 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L+ ++++I LG+KEPTPIQ+ IP + KD+IG A+TG+GKT AF +PI+
Sbjct: 3 FEDLQLNKNILRAIDELGYKEPTPIQQKAIPFILAE-KDLIGCAQTGTGKTAAFAMPIIH 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L K G +K ++A + LI+TPTRELA+Q+ D+ ++ AK NV +
Sbjct: 62 YL----HKLGNT--KKAKKA---------KVLIVTPTRELAVQIGDNFEKYAKYTNVTYI 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGMS + Q L ++++GTPGRL +L +KHL +L L F VLDEAD M++
Sbjct: 107 TLYGGMSIKPQIEQLNKGADVIIGTPGRLLDLYK--QKHL-DLDHLHFLVLDEADLMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIAL 406
G +++ +I + P SN RQTL+FSAT+ L
Sbjct: 164 GFIDDVKKLIQLTP----SN--------------------RQTLLFSATMPL 191
>gi|323143379|ref|ZP_08078066.1| cold-shock DEAD-box protein A [Succinatimonas hippei YIT 12066]
gi|322416845|gb|EFY07492.1| cold-shock DEAD-box protein A [Succinatimonas hippei YIT 12066]
Length = 683
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 137/241 (56%), Gaps = 37/241 (15%)
Query: 141 KIKTVE--ESVTVSNGPDDA----------EEELVSEAEISTEFDAWNELRLHPLLMKSI 188
+IK VE +SV VS G D++ E++ E E E +++ L+L PL++++I
Sbjct: 9 EIKEVESSDSVAVSVGADESLLLKENEEQNNEQVDVEEEKEPELISFDSLQLSPLVLQAI 68
Query: 189 YRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLE 248
LGF+ PTPIQ+ IP G D+IG A+TG+GKT AF LPI+ +L E +
Sbjct: 69 KDLGFESPTPIQERAIPVMM-SGDDMIGQAQTGTGKTAAFALPILSKLEPENK------- 120
Query: 249 EKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQER 307
++ AL++ PTRELALQV + + A+ I + VVPI GG S + Q R
Sbjct: 121 -------------NIFALVLEPTRELALQVAESFQAFARHIEDFHVVPIYGGASYDNQIR 167
Query: 308 LLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 367
++ ++VV TPGRL +L+ G+ ++L ++S+ V+DEAD M+ G ++ I++
Sbjct: 168 SIRHGAQVVVATPGRLIDLIERGK---IDLSSVSYMVIDEADEMLRMGFIDDVDWILNHT 224
Query: 368 P 368
P
Sbjct: 225 P 225
>gi|398835789|ref|ZP_10593146.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
gi|398215227|gb|EJN01792.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
Length = 487
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 123/232 (53%), Gaps = 42/232 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + L P +++++ G+ PTPIQ IP QG+D++GAA+TG+GKT F LPI+Q
Sbjct: 18 FEDFGLSPDILRALTEQGYVHPTPIQAQAIPVVL-QGRDVMGAAQTGTGKTAGFSLPIIQ 76
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
LL + +P H +RALI+TPTRELA QV D++K ++ +R
Sbjct: 77 LLL-------------AHASTSASPARHPVRALILTPTRELADQVADNVKAYSRFTPLRS 123
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG+ Q L+A E+V+ TPGRL + + ++ V L V+DEADRM++
Sbjct: 124 TVVFGGVDMAPQTATLRAGVEIVIATPGRLLDHV---QQKTVNLSQTQILVMDEADRMLD 180
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +LQ II++LP KKRQ L+FSAT +
Sbjct: 181 MGFLPDLQRIINLLP------------------------KKRQNLMFSATFS 208
>gi|209517599|ref|ZP_03266438.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
gi|209502012|gb|EEA02029.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
Length = 510
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 42/244 (17%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
+S+ ++ + +++ L P ++K+I G+ PTPIQ IP G+D++GAA+TG+
Sbjct: 23 MSDTAVTPSTETFDQFGLAPDILKAIKESGYTSPTPIQAKAIPVVL-AGRDVMGAAQTGT 81
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDH 281
GKT +F LPI+QRLL + + +P H +RALI+TPTRELA QV +
Sbjct: 82 GKTASFSLPIIQRLLPQASTSA-------------SPARHPVRALILTPTRELADQVAAN 128
Query: 282 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 341
++ AK +R + GG+ Q L+ E+++ TPGRL + + ++ L +
Sbjct: 129 VQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHV---QQKTANLGQVQ 185
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 401
VLDEADRM++ G +LQ I+++LP K+RQTL+FS
Sbjct: 186 MLVLDEADRMLDMGFLPDLQRILNLLP------------------------KERQTLLFS 221
Query: 402 ATIA 405
AT +
Sbjct: 222 ATFS 225
>gi|354547460|emb|CCE44195.1| hypothetical protein CPAR2_504190 [Candida parapsilosis]
Length = 604
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 130/239 (54%), Gaps = 49/239 (20%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
E ST F EL+L ++KSI L F PTPIQ + IP A GKDI+ A+TGSGKT
Sbjct: 122 ETSTTF---QELQLSRPILKSIQSLSFTSPTPIQSSTIPIALL-GKDIVAGAQTGSGKTA 177
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 286
A+ +P+++RL+ + +A+I+TPTRELA+QV D K++
Sbjct: 178 AYLIPLIERLI-------------------FKNATSTKAIILTPTRELAIQVYDVGKKLG 218
Query: 287 KGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
+ + N+ VGG++ +QE+ LK+RP++V+ TPGRL + + VE + V+
Sbjct: 219 QFVKNLSFGLAVGGLNLRQQEQQLKSRPDIVIATPGRLIDHIRNSPSFSVE--DVQVLVI 276
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADRM+E G EL I+ ++P ++KRQTL+FSAT+
Sbjct: 277 DEADRMLEEGFQEELTEILSLIP-----------------------KQKRQTLLFSATM 312
>gi|300121162|emb|CBK21543.2| unnamed protein product [Blastocystis hominis]
Length = 627
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 44/231 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++N+LRL L++++ +GF PTPIQ CIP A GKDI AA+TGSGKT A+ LPI+
Sbjct: 171 SFNQLRLSRPLLRAVNEMGFTTPTPIQARCIPLAL-AGKDICAAAKTGSGKTAAYLLPIL 229
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+RLL K + +R LI+ PTRELA QV ++ K ++
Sbjct: 230 ERLLY-----------------KNNAQNLIRVLIVAPTRELAQQVHTIATKLTKYTSITC 272
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+VGG+ + Q L+ RP++VV TPGR+ + + V+L + +LDEADR++E
Sbjct: 273 CLVVGGLPLQAQAVDLQRRPDIVVCTPGRMIDHVHNSMS--VDLDDVEVVILDEADRLLE 330
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G EL ++ + P+ KRQTL+FSAT+
Sbjct: 331 LGFTEELHELLRLCPV------------------------KRQTLLFSATM 357
>gi|357040015|ref|ZP_09101805.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum gibsoniae
DSM 7213]
gi|355356995|gb|EHG04774.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum gibsoniae
DSM 7213]
Length = 482
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 130/242 (53%), Gaps = 53/242 (21%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+N+ L ++K++ +GF+E TPIQ+ IP QG+D+IG A TG+GKT AFG+P+M
Sbjct: 3 VFNDFGLTEPVIKALNNMGFEEATPIQERAIPVGL-QGRDLIGQAHTGTGKTAAFGIPLM 61
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ L RE +++ +++TPTRELA+QV + L ++ + +R
Sbjct: 62 EILQVRRE--------------------YIQGVVLTPTRELAVQVAEELNKLGQYKGIRT 101
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+PI GG +Q R LK RP ++VGTPGRL + M + + L+ +S VLDEAD M+
Sbjct: 102 LPIYGGQDINRQIRALKKRPHIIVGTPGRLMDHM---RRKTIRLNQVSMVVLDEADEMLN 158
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSA 408
G ++++I+ +P +RQT++FSAT+ AL+
Sbjct: 159 MGFIEDIENILKDIP------------------------AERQTMLFSATMPAPIRALAG 194
Query: 409 DF 410
F
Sbjct: 195 RF 196
>gi|304315659|ref|YP_003850804.1| DEAD/DEAH box helicase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302777161|gb|ADL67720.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 514
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 130/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L+ ++K+I +GF+EP+ IQ IP QG D+IG AETG+GKTLA+G PI+
Sbjct: 3 FKELNLNEKILKAIDDMGFEEPSKIQSEVIPVLL-QGSDVIGQAETGTGKTLAYGAPIIN 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + +G + L++TPTRELA+QV D L + K VR++
Sbjct: 62 NI--------------------GSNEGKVFCLVLTPTRELAIQVNDELARIGKYSKVRLL 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG+ ++Q + +K ++++GTPGR+ +L+ ++ ++ L+ + + VLDEAD M++
Sbjct: 102 PVYGGVQIDRQIKAIKRGVDIIIGTPGRVLDLI---KRDILRLNDVKYLVLDEADEMLDM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II N +N K+RQT++FSAT+
Sbjct: 159 GFIDDIKEII------NHTN------------------KERQTMMFSATM 184
>gi|152974078|ref|YP_001373595.1| DEAD/DEAH box helicase [Bacillus cytotoxicus NVH 391-98]
gi|152022830|gb|ABS20600.1| DEAD/DEAH box helicase domain protein [Bacillus cytotoxicus NVH
391-98]
Length = 511
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 127/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L L++S+ ++GF+E TPIQ IP A QGKDIIG A+TG+GKT AFGLP+++
Sbjct: 16 FRELGLSDSLLQSVEKMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLE 74
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +E ++ ++I PTRELA+QV + L ++ + VR++
Sbjct: 75 KVDTNKE--------------------MVQGIVIAPTRELAIQVGEELYKIGQHKRVRIL 114
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK RP ++VGTPGR+ + ++ + + L + VLDEAD M+
Sbjct: 115 PIYGGQDINRQIRALKKRPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNM 171
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P T+ QTL+FSAT+
Sbjct: 172 GFIEDIEAILTDVPETH------------------------QTLLFSATM 197
>gi|395215483|ref|ZP_10400949.1| DEAD/DEAH box helicase [Pontibacter sp. BAB1700]
gi|394455827|gb|EJF10233.1| DEAD/DEAH box helicase [Pontibacter sp. BAB1700]
Length = 476
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 122/230 (53%), Gaps = 44/230 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL L ++K++ G+ +PTPIQ+ IP G D++G A+TG+GKT AF +P++Q
Sbjct: 3 FSELNLIDPILKALQAEGYTQPTPIQEQAIPHLL-AGTDVLGCAQTGTGKTAAFAIPVLQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L ++ +A + + LI+TPTRELA+Q+ + K VR
Sbjct: 62 MLHNQKNRASNTI----------------KTLILTPTRELAIQINESFAAYGKNTGVRHT 105
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S Q + LK ++++ TPGRL +L+ G + L + FFVLDEADRM++
Sbjct: 106 VIFGGVSQHAQVQTLKRGVDVLIATPGRLLDLIGQG---FISLKHVEFFVLDEADRMLDM 162
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II MLP K+RQ+L FSAT+
Sbjct: 163 GFIHDVKRIIPMLP------------------------KQRQSLFFSATM 188
>gi|255534886|ref|YP_003095257.1| ATP-dependent RNA helicase RhlE [Flavobacteriaceae bacterium
3519-10]
gi|255341082|gb|ACU07195.1| ATP-dependent RNA helicase RhlE [Flavobacteriaceae bacterium
3519-10]
Length = 417
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 121/230 (52%), Gaps = 45/230 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L + K++ G+ +PTPIQ IP+ QG+D++G A+TG+GKT AF +PI+Q
Sbjct: 3 FTDLQLIDPIAKALQEEGYTQPTPIQAKAIPSIL-QGRDLLGTAQTGTGKTAAFAIPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L EK ++ALI+TPTRELA+Q+ + + + +R +
Sbjct: 62 NL-----------------TEKNIRNNQIKALILTPTRELAIQIEESFNAYGRHLRLRNL 104
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG+ QE LK +++V TPGRL + +S G ++ L L FVLDEADRM++
Sbjct: 105 VVFGGVKQSGQEAALKKGVDILVATPGRLLDFISQG---IISLKNLEIFVLDEADRMLDM 161
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II +LP KRQTL FSAT
Sbjct: 162 GFVHDVKRIIKLLP------------------------PKRQTLFFSATF 187
>gi|209543288|ref|YP_002275517.1| DEAD/DEAH box helicase [Gluconacetobacter diazotrophicus PAl 5]
gi|209530965|gb|ACI50902.1| DEAD/DEAH box helicase domain protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 596
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 145/281 (51%), Gaps = 59/281 (20%)
Query: 181 HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEER 240
HP L +++ G++EPTP+QKA + AA G+D++ +A+TGSGKT+AFGL + LL
Sbjct: 7 HPALRRALDARGYEEPTPVQKAVLDVAA-DGRDLLVSAQTGSGKTVAFGLAMADTLLGG- 64
Query: 241 EKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGM 300
AE++ P G A+II PTRELA+QV L + R+V +GGM
Sbjct: 65 -------------AERFGPAGAPLAVIIAPTRELAMQVQRELSWLYAPAGARIVSCIGGM 111
Query: 301 STEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 360
++ R L+ +VVGTPGRL + S G L EL + VLDEAD M++ G EL
Sbjct: 112 DARREARALEIGAHIVVGTPGRLCDHQSRGRLVLSELRVV---VLDEADEMLDLGFRDEL 168
Query: 361 QSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS-ADFRKKLKHGSL 419
Q ++D +P T R+TL+FSATIA A ++ + +L
Sbjct: 169 QQLLDAMPDT------------------------RRTLLFSATIAKDIATLARRYQRDAL 204
Query: 420 KLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLE 460
+ I+TLS G R + D+T +V+A+ E
Sbjct: 205 R----------IDTLS---GARQH---ADITYRAVMADPRE 229
>gi|254578822|ref|XP_002495397.1| ZYRO0B10318p [Zygosaccharomyces rouxii]
gi|238938287|emb|CAR26464.1| ZYRO0B10318p [Zygosaccharomyces rouxii]
Length = 750
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 125/234 (53%), Gaps = 45/234 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
F+ +N L L ++K++ LG+ P+PIQ A IP A GKDII A TGSGKT AF +P
Sbjct: 236 FNNFNSLSLSRPVLKALGDLGYATPSPIQGATIPIALL-GKDIIAGAVTGSGKTAAFMIP 294
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
I++RL+ K A R +++ PTRELA+QV D K++ K +N
Sbjct: 295 IIERLI-----------------YKPAKVASTRVIVLAPTRELAIQVADVGKKLGKYVNG 337
Query: 292 RVVPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
I VGG++ +QE++LK RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 338 LTFGIAVGGLNLRQQEQILKTRPDIVIATPGRFIDHIRNSSSFNVD--SVEVLVIDEADR 395
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
M+E G E+ I+ +LP KRQT++FSAT+
Sbjct: 396 MLEEGFQDEINEIMHLLP------------------------SKRQTMLFSATM 425
>gi|433653854|ref|YP_007297562.1| DNA/RNA helicase, superfamily II [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292043|gb|AGB17865.1| DNA/RNA helicase, superfamily II [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 514
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 131/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L+ ++K+I +GF+EP+ IQ IP +G D+IG AETG+GKTLA+G PI+
Sbjct: 3 FKELNLNEKILKAIDDMGFEEPSKIQSEVIPVLL-EGSDVIGQAETGTGKTLAYGAPIIN 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
G + G + LI+TPTRELA+Q+ D L + K VR++
Sbjct: 62 SF--------------G------SNDGKVFCLILTPTRELAIQINDELARIGKYSKVRLL 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG+ ++Q + +K ++VVGTPGR+ +L+ ++++++L ++ + V+DEAD M++
Sbjct: 102 PVYGGVQIDRQIKAIKRGVDIVVGTPGRVLDLI---KRNVLDLKSVKYLVIDEADEMLDM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II N +NE +RQT++FSAT+
Sbjct: 159 GFIDDIKEII------NHTNE------------------ERQTMMFSATM 184
>gi|418915213|ref|ZP_13469180.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC340D]
gi|377754656|gb|EHT78563.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus aureus
subsp. aureus CIGC340D]
Length = 506
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 132/246 (53%), Gaps = 53/246 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++S+ +GFKEPTPIQK IP A QG DI+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK K +++LI+ PTRELA+QV + L+E ++ V+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSREQGVQVV 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G +++ I+D +P +RQT++FSAT+ AL
Sbjct: 159 GFIDDMRFIMDKIPAV-----------------------QRQTMLFSATMPKAIQALVQQ 195
Query: 410 FRKKLK 415
F K K
Sbjct: 196 FMKSPK 201
>gi|212692656|ref|ZP_03300784.1| hypothetical protein BACDOR_02153 [Bacteroides dorei DSM 17855]
gi|237709374|ref|ZP_04539855.1| ATP-dependent RNA helicase [Bacteroides sp. 9_1_42FAA]
gi|265754557|ref|ZP_06089609.1| ATP-dependent RNA helicase [Bacteroides sp. 3_1_33FAA]
gi|345514379|ref|ZP_08793890.1| ATP-dependent RNA helicase [Bacteroides dorei 5_1_36/D4]
gi|423230441|ref|ZP_17216845.1| hypothetical protein HMPREF1063_02665 [Bacteroides dorei
CL02T00C15]
gi|423240913|ref|ZP_17222027.1| hypothetical protein HMPREF1065_02650 [Bacteroides dorei
CL03T12C01]
gi|423244150|ref|ZP_17225225.1| hypothetical protein HMPREF1064_01431 [Bacteroides dorei
CL02T12C06]
gi|212664734|gb|EEB25306.1| DEAD/DEAH box helicase [Bacteroides dorei DSM 17855]
gi|229436798|gb|EEO46875.1| ATP-dependent RNA helicase [Bacteroides dorei 5_1_36/D4]
gi|229456430|gb|EEO62151.1| ATP-dependent RNA helicase [Bacteroides sp. 9_1_42FAA]
gi|263234671|gb|EEZ20239.1| ATP-dependent RNA helicase [Bacteroides sp. 3_1_33FAA]
gi|392630976|gb|EIY24955.1| hypothetical protein HMPREF1063_02665 [Bacteroides dorei
CL02T00C15]
gi|392642704|gb|EIY36467.1| hypothetical protein HMPREF1064_01431 [Bacteroides dorei
CL02T12C06]
gi|392642975|gb|EIY36733.1| hypothetical protein HMPREF1065_02650 [Bacteroides dorei
CL03T12C01]
Length = 624
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 128/232 (55%), Gaps = 48/232 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + P ++K+I +G++ P P+Q+ IP G D++ A+TG+GKT AFGLP++Q
Sbjct: 4 FEELGVSPEILKAIKEMGYENPMPVQEEVIPYLLGNGNDVVALAQTGTGKTAAFGLPLIQ 63
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-VRV 293
++ E +K P+ ALI+ PTREL LQ+ L + +K I+ ++V
Sbjct: 64 KI----------------EVKKRVPQ----ALILCPTRELCLQIAGDLNDYSKYIDGLKV 103
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+P+ GG S E Q R+LKA ++V TPGRL +LM E+ + +L T++ V+DEAD M+
Sbjct: 104 LPVYGGSSIESQIRMLKAGVHIIVATPGRLIDLM---ERKVAKLETIADVVMDEADEMLN 160
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G + +I++ +P + R TL+FSAT++
Sbjct: 161 MGFTDSINAILEKVP------------------------EDRNTLMFSATMS 188
>gi|265754229|ref|ZP_06089418.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 3_1_33FAA]
gi|423241599|ref|ZP_17222711.1| hypothetical protein HMPREF1065_03334 [Bacteroides dorei
CL03T12C01]
gi|263234938|gb|EEZ20493.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 3_1_33FAA]
gi|392641052|gb|EIY34840.1| hypothetical protein HMPREF1065_03334 [Bacteroides dorei
CL03T12C01]
Length = 434
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 125/230 (54%), Gaps = 46/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K++ + G+ PTPIQ+ IP +GKD++G A+TG+GKT AF +P++Q
Sbjct: 3 FKELDLIEPILKALQQTGYTTPTPIQEQAIPVLL-KGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL + K G ++ALI+TPTRELA+Q+ ++ + AK V+
Sbjct: 62 RLYQSDHKKG------------------IKALILTPTRELAIQIGENFDQYAKYTGVKHA 103
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + Q LK ++++ TPGRL +L S G + L L +FVLDEADRM++
Sbjct: 104 VIFGGVPQKAQVDALKRGVQVLIATPGRLLDLQSQG---CISLKGLEYFVLDEADRMLDM 160
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ ++ ++P +RQTL FSAT+
Sbjct: 161 GFIHDIKKVLKLIPA------------------------RRQTLFFSATM 186
>gi|295696219|ref|YP_003589457.1| DEAD/DEAH box helicase [Kyrpidia tusciae DSM 2912]
gi|295411821|gb|ADG06313.1| DEAD/DEAH box helicase domain protein [Kyrpidia tusciae DSM 2912]
Length = 526
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 154/287 (53%), Gaps = 56/287 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ + +L + ++I +GF+EP+PIQ ACIP QGKD+IG A+TG+GKT AFG+PI++
Sbjct: 4 FTDFQLSRRVQQAIDDMGFEEPSPIQAACIPLVL-QGKDVIGQAQTGTGKTAAFGVPIIE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ R H++ALI+TPTRELA+QV L+++AK VR +
Sbjct: 63 MMGTGR---------------------HVQALILTPTRELAIQVAGELRKIAKYARVRTL 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG S Q R L+ +V+GTPGR+ + + G L ++ T+ VLDEAD M++
Sbjct: 102 PIYGGQSIGHQIRALQQGVGVVIGTPGRVLDHLRRGTLKLDKVRTV---VLDEADEMLDM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++++I+ P ++RQTL+FSAT L+
Sbjct: 159 GFIEDIEAILKETP------------------------QERQTLLFSATFPHEVKQLAVR 194
Query: 410 FRKKLKHGSL-KLKQSVNGLNSIET-LSERAGMRANVAIVDLTNVSV 454
+ K +H ++ + + +V ++ I + ER + + I+D +VS+
Sbjct: 195 YMKNPEHVTVNRGEMTVPLIDQIYYKVLERNKLESLCRIIDSEDVSL 241
>gi|213408188|ref|XP_002174865.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
gi|212002912|gb|EEB08572.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
Length = 730
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 125/238 (52%), Gaps = 48/238 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ +++L +++ + L F++PTPIQ IP A GKDI+GAA TGSGKT AF +PI+
Sbjct: 232 SFQDMKLSRPILRGLSSLNFEDPTPIQSKTIPVAL-LGKDIVGAAVTGSGKTAAFVVPIL 290
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINV 291
+RL+ Y PK R LII PTRELA+Q + K +A ++
Sbjct: 291 ERLV-------------------YRPKKIPTSRVLIICPTRELAMQCHNVAKRIAAFTDI 331
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ VGG+S + QE+ L+ RP++++ TPGR + + + V+ + V+DEADRM
Sbjct: 332 TLCLCVGGLSLKVQEQELRKRPDIIIATPGRFIDHVRNSQGFSVD--NIEIMVIDEADRM 389
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+E+G EL I+ + P K RQT++FSAT+ D
Sbjct: 390 LEDGFADELNEIVKLCP------------------------KSRQTMLFSATMTEKVD 423
>gi|221056985|ref|XP_002259630.1| snrnp protein [Plasmodium knowlesi strain H]
gi|193809702|emb|CAQ40404.1| snrnp protein, putative [Plasmodium knowlesi strain H]
Length = 1001
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 16/230 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L L+K+I + +++PTPIQ IP A +D+IG AETGSGKT AF LP++
Sbjct: 578 WEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEM-RDLIGIAETGSGKTAAFVLPMLS 636
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K L E + P ALII P+RELA+Q+ D + A + R V
Sbjct: 637 YV--------KQLPPLTYETSQDGP----YALIIAPSRELAIQIFDETNKFASYCSCRTV 684
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG + E+Q L+ E+++GTPGR+ + + EK L+ ++ +LDEADRM++
Sbjct: 685 AVVGGRNAEEQAFELRKGVEIIIGTPGRIQDCL---EKAYTVLNQCNYVILDEADRMMDM 741
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G + I+D +P +N +E ++ Q + + R R T +FSAT+
Sbjct: 742 GFEDSVHFILDKIPTSNLKSEDEALALQEEMMAKAGHRLYRLTQMFSATM 791
>gi|167622911|ref|YP_001673205.1| DEAD/DEAH box helicase [Shewanella halifaxensis HAW-EB4]
gi|167352933|gb|ABZ75546.1| DEAD/DEAH box helicase domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 432
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 127/235 (54%), Gaps = 51/235 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ P ++++I G+++ TPIQ+ IPA +G+D++ +A+TG+GKT AF LPI+Q
Sbjct: 3 FESFSFAPEILRAISECGYEKMTPIQQQAIPAV-RRGQDVLASAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++L+ G+ + RALI+TPTRELA Q+ D++ + AK ++++VV
Sbjct: 62 KMLDNPSTTGR---------------SNARALILTPTRELAAQIADNINDYAKYLDMKVV 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV----ELHTLSFFVLDEADR 350
++GG+ + Q LK ++++ TPGRL E H+V L + F VLDEADR
Sbjct: 107 TVLGGVKMDSQATKLKRGADIIIATPGRLLE-------HIVACNLSLSNVDFLVLDEADR 159
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
M++ G ++Q I+ + KKRQ L+FSAT +
Sbjct: 160 MLDMGFSADIQKILQAV------------------------NKKRQNLLFSATFS 190
>gi|399114783|emb|CCG17579.1| ATP-dependent rna helicase [Taylorella equigenitalis 14/56]
Length = 581
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 126/238 (52%), Gaps = 36/238 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L + L+KS+ R+ F+ PT +Q IP A +GKD+I +A+TGSGKT AF LP +Q
Sbjct: 6 FADLGIEQTLLKSLERIDFRNPTEVQVKSIPLAL-KGKDLIVSAQTGSGKTAAFMLPSIQ 64
Query: 235 RLLEEREK-------AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
+LL E E A K +++ +E PK ++ L++TPTRELA+QV+D KE
Sbjct: 65 QLLHELETRPAPEQIASKSSKQRKRRSEANPPKYGVQILVLTPTRELAMQVSDATKEFIY 124
Query: 288 GI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
G V + +VGGM+ Q L E+VV TPGRL + + G V L L +LD
Sbjct: 125 GFKGVHIATLVGGMAYGPQINSLSREVEIVVATPGRLLDHIKAGR---VNLRNLKILILD 181
Query: 347 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
EADRM++ G ++ +++ P RQTL+FSAT
Sbjct: 182 EADRMLDMGFIHDINNVVAETP------------------------DDRQTLLFSATF 215
>gi|397662367|ref|YP_006503067.1| ATP-dependent rna helicase [Taylorella equigenitalis ATCC 35865]
gi|394350546|gb|AFN36460.1| ATP-dependent rna helicase [Taylorella equigenitalis ATCC 35865]
Length = 581
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 126/238 (52%), Gaps = 36/238 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L + L+KS+ R+ F+ PT +Q IP A +GKD+I +A+TGSGKT AF LP +Q
Sbjct: 6 FADLGIEQTLLKSLERIDFRNPTEVQVKSIPLAL-KGKDLIVSAQTGSGKTAAFMLPSIQ 64
Query: 235 RLLEEREK-------AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
+LL E E A K +++ +E PK ++ L++TPTRELA+QV+D KE
Sbjct: 65 QLLHELETRPAPEQIASKSSKQRKRRSEANPPKYGVQILVLTPTRELAMQVSDATKEFIY 124
Query: 288 GI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
G V + +VGGM+ Q L E+VV TPGRL + + G V L L +LD
Sbjct: 125 GFKGVHIATLVGGMAYGPQINSLSREVEIVVATPGRLLDHIKAGR---VNLRNLKILILD 181
Query: 347 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
EADRM++ G ++ +++ P RQTL+FSAT
Sbjct: 182 EADRMLDMGFIHDINNVVAETP------------------------DDRQTLLFSATF 215
>gi|423229947|ref|ZP_17216352.1| hypothetical protein HMPREF1063_02172 [Bacteroides dorei
CL02T00C15]
gi|423247037|ref|ZP_17228088.1| hypothetical protein HMPREF1064_04294 [Bacteroides dorei
CL02T12C06]
gi|392632157|gb|EIY26120.1| hypothetical protein HMPREF1063_02172 [Bacteroides dorei
CL02T00C15]
gi|392633650|gb|EIY27591.1| hypothetical protein HMPREF1064_04294 [Bacteroides dorei
CL02T12C06]
Length = 434
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 125/230 (54%), Gaps = 46/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K++ + G+ PTPIQ+ IP +GKD++G A+TG+GKT AF +P++Q
Sbjct: 3 FKELDLIEPILKALQQTGYTTPTPIQEQAIPVLL-KGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL + K G ++ALI+TPTRELA+Q+ ++ + AK V+
Sbjct: 62 RLYQSDHKKG------------------IKALILTPTRELAIQIGENFDQYAKYTGVKHA 103
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + Q LK ++++ TPGRL +L S G + L L +FVLDEADRM++
Sbjct: 104 VIFGGVPQKAQVDALKRGVQVLIATPGRLLDLQSQG---CISLKGLEYFVLDEADRMLDM 160
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ ++ ++P +RQTL FSAT+
Sbjct: 161 GFIHDIKKVLKLIPA------------------------RRQTLFFSATM 186
>gi|170582680|ref|XP_001896237.1| CG10333-PA [Brugia malayi]
gi|158596582|gb|EDP34904.1| CG10333-PA, putative [Brugia malayi]
Length = 719
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 134/232 (57%), Gaps = 16/232 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L + I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 314 WEEAGLPAEVFDVIMKIGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFLIPLLV 372
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + + G + + P A+I+ PTRELA Q+ + + + + +R V
Sbjct: 373 WITS-------IPKFHGNDDQDTGPY----AIIMAPTRELAQQIEEETVKFGQLLGIRTV 421
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG S E+Q L+ E+V+ TPGRL +++ E + L ++ +LDEADRM++
Sbjct: 422 SVIGGASREEQGLKLRLGVEVVIATPGRLLDVL---ENRYLSLDQCTYVILDEADRMLDM 478
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIA 405
G E+Q +++ +P+TN + + + + + + +KK RQT++F+AT++
Sbjct: 479 GFEPEVQKVLEYIPVTNLKPDTEEAEKEESIMENFYSKKKYRQTVMFTATMS 530
>gi|452990332|emb|CCQ98554.1| putative ATP-dependent RNA helicase [Clostridium ultunense Esp]
Length = 535
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 130/237 (54%), Gaps = 49/237 (20%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
++ ++ E ++ ++K+I +GF+EP+PIQ ACIP +G D+IG A+TG+GKT A
Sbjct: 8 VTNSMSSFQEFKIDQAILKAIQEMGFEEPSPIQSACIPKIL-EGFDVIGQAQTGTGKTAA 66
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
FG+PI+ EK ++AL++TPTRELA+Q++ L++++K
Sbjct: 67 FGIPIV---------------------EKVTSSPEVQALVLTPTRELAIQISGELRKISK 105
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
++ +PI GG S Q R LK ++V+GTPGR+ + ++ + ++L + VLDE
Sbjct: 106 FKRIKTLPIYGGQSIGHQIRALKQGVQVVIGTPGRIIDHLN---RKTLKLDHVRIVVLDE 162
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
AD M++ G +++SI+ +P RQTL+FSAT+
Sbjct: 163 ADEMLDMGFIDDIESILRSVP------------------------ADRQTLLFSATM 195
>gi|393220338|gb|EJD05824.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 740
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 140/257 (54%), Gaps = 24/257 (9%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
+I +W E + P +++ + ++G+KEP+ IQ+ IP Q +D+IG AETGSGKT
Sbjct: 309 QIPHPLRSWTESEIPPTILEVVEKVGYKEPSAIQRQAIPIGL-QNRDLIGIAETGSGKTA 367
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 286
AF +P++ + L E+ P ALI+ PTRELA Q+ ++ A
Sbjct: 368 AFVIPMLTYI--------SNLPPFTEDNRHLGPY----ALILAPTRELAQQIESETRKFA 415
Query: 287 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
+ + V IVGG S E+Q+ L+ E+++ TPGRL +++ E+H++ L S+ V+D
Sbjct: 416 SPLGFKCVSIVGGRSVEEQQFNLREGAEIIIATPGRLKDVI---ERHVIVLSQCSYIVMD 472
Query: 347 EADRMIENGHFRELQSIIDMLP--MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
EADRM+ G +L I+D LP M G +EG + V + + R T +FSAT+
Sbjct: 473 EADRMVNLGFEVDLTFILDKLPSEMLKGEDEGMMDVDGEMVR----RGRTRVTTLFSATM 528
Query: 405 --ALSADFRKKLKHGSL 419
A+ RK LK ++
Sbjct: 529 PPAVERLTRKYLKKPAI 545
>gi|336311025|ref|ZP_08565993.1| ATP-dependent RNA helicase [Shewanella sp. HN-41]
gi|335865440|gb|EGM70463.1| ATP-dependent RNA helicase [Shewanella sp. HN-41]
Length = 409
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 129/231 (55%), Gaps = 42/231 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++N L LH L+ ++ LG+++PTPIQ IP + +D++ A+TG+GKT AF LPI+
Sbjct: 2 SFNSLSLHSQLVNTLAELGYQQPTPIQVEAIPVILAK-QDLMAGAQTGTGKTAAFALPIL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
L+ A + EE AP+ H+RAL++ PTRELA+QV AKG ++R+
Sbjct: 61 HGLM-----AAPLTEE--------APR-HIRALVLVPTRELAVQVQQSFVNYAKGTDIRI 106
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
GG+S + Q + KA ++++ TPGRL + + G +L +L+ L F DEADRM++
Sbjct: 107 GIAYGGVSIDAQVEVFKAGIDVLIATPGRLLDHLRQGALNLKQLNVLVF---DEADRMLD 163
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E+++++ +P KRQTL+FSAT+
Sbjct: 164 MGFMDEIKAVLKQVP------------------------AKRQTLLFSATL 190
>gi|337745879|ref|YP_004640041.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus KNP414]
gi|379719836|ref|YP_005311967.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus 3016]
gi|386722433|ref|YP_006188759.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
gi|336297068|gb|AEI40171.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus KNP414]
gi|378568508|gb|AFC28818.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus 3016]
gi|384089558|gb|AFH60994.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
Length = 537
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 152/282 (53%), Gaps = 55/282 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++E L P ++++I +GF+E TPIQ+ IP A +G+D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSEFGLEPKVLRAITEMGFEESTPIQEKAIPVAL-EGRDLIGQAQTGTGKTAAFGIPLVN 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + EK + ALI+ PTRELA+QV + ++++ + +R +
Sbjct: 63 KIDVKEEK--------------------IVALIMCPTRELAIQVAEEIEKLGRFKGIRSL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG KQ R L+ +P++++GTPGRL + ++ + ++L + +LDEAD M++
Sbjct: 103 PIYGGQDIVKQIRGLRKKPQIIIGTPGRLLDHIN---RKTIKLDDVQTVILDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++SI+ ++P ++R T++FSAT+ L+
Sbjct: 160 GFMDDIKSILSLVP------------------------EERNTMLFSATMPVNIQKLAQQ 195
Query: 410 FRKKLKHGSLKLKQSVNGL--NSIETLSERAGMRANVAIVDL 449
F K +H S+ KQ L + L ER A ++D+
Sbjct: 196 FLKDPEHVSVIPKQVSAPLIDQAYIELHERQKFEALCRLIDM 237
>gi|212690559|ref|ZP_03298687.1| hypothetical protein BACDOR_00044 [Bacteroides dorei DSM 17855]
gi|212666908|gb|EEB27480.1| DEAD/DEAH box helicase [Bacteroides dorei DSM 17855]
Length = 434
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 125/230 (54%), Gaps = 46/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K++ + G+ PTPIQ+ IP +GKD++G A+TG+GKT AF +P++Q
Sbjct: 3 FKELDLIEPILKALQQTGYTTPTPIQEQAIPVLL-KGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL + K G ++ALI+TPTRELA+Q+ ++ + AK V+
Sbjct: 62 RLYQSDHKKG------------------IKALILTPTRELAIQIGENFDQYAKYTGVKHA 103
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + Q LK ++++ TPGRL +L S G + L L +FVLDEADRM++
Sbjct: 104 VIFGGVPQKAQVDALKRGVQVLIATPGRLLDLQSQG---CISLKGLEYFVLDEADRMLDM 160
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ ++ ++P +RQTL FSAT+
Sbjct: 161 GFIHDIKKVLKLIPA------------------------RRQTLFFSATM 186
>gi|171913474|ref|ZP_02928944.1| DEAD/DEAH box helicase-like protein [Verrucomicrobium spinosum DSM
4136]
Length = 452
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 126/231 (54%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ L LH ++K+I G+ EPTPIQ A IP G D+IG A+TG+GKT AF LP++
Sbjct: 3 FRALGLHENILKAIQEAGYSEPTPIQAAAIPQVV-AGHDMIGIAQTGTGKTAAFTLPMLH 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L + L +G P ++ALI+ PTREL Q+ D+++ AK + ++V
Sbjct: 62 LLAQ--------LHGQG-------PLRGIKALILAPTRELVAQIHDNVRAYAKHLPLKVA 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ Q L+A +LV+ TPGRL +LM G++H ++L F VLDEADRM++
Sbjct: 107 MIFGGVGERPQIEALRAGTDLVIATPGRLIDLM--GQRH-GNFNSLEFLVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G ++ I+ LP KKRQTL+FSAT++
Sbjct: 164 GFLPSIKRIVKALP------------------------KKRQTLLFSATLS 190
>gi|384567061|ref|ZP_10014165.1| DNA/RNA helicase, superfamily II [Saccharomonospora glauca K62]
gi|384522915|gb|EIF00111.1| DNA/RNA helicase, superfamily II [Saccharomonospora glauca K62]
Length = 577
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 134/256 (52%), Gaps = 47/256 (18%)
Query: 149 VTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAA 208
V ++ DA E + A++ T A+ +L L P L+K++ LG++EPTPIQ+A IP
Sbjct: 2 VAITAESHDAPEGAIDTADLGTAV-AFGDLGLRPELLKALSDLGYEEPTPIQRAAIPPLL 60
Query: 209 HQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALII 268
+G D++G A TG+GKT AF LP++ R+ + ++G E AL++
Sbjct: 61 -EGADVVGQAATGTGKTAAFSLPVLHRIADL---------DRGTEPS---------ALVL 101
Query: 269 TPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMS 328
PTRELA QV + + + VRVVP+ GG +Q R L++ ++VV TPGR + +S
Sbjct: 102 VPTRELAAQVCEAMYRYGHHLGVRVVPVYGGQPMGRQLRSLESGVDVVVATPGRALDHLS 161
Query: 329 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVS 388
G ++L L VLDEAD M++ G ++ +I+D P
Sbjct: 162 RGS---LDLSKLRMVVLDEADEMLDMGFAEDIDAILDRTP-------------------- 198
Query: 389 SLQRKKRQTLVFSATI 404
RQT++FSAT+
Sbjct: 199 ----DDRQTMLFSATM 210
>gi|422322840|ref|ZP_16403880.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
gi|317402151|gb|EFV82742.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
Length = 481
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 125/232 (53%), Gaps = 42/232 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+++ LHPLL++SI G+ PTPIQ IP +G+D++GAA+TG+GKT AF LPI+
Sbjct: 20 FSDFGLHPLLLQSIAETGYTTPTPIQAQAIPVVV-EGRDVMGAAQTGTGKTAAFTLPILH 78
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKEVAKGINVRV 293
RL+ + +P H +RALI+TPTRELA QV + +K +K +R
Sbjct: 79 RLMPLANTSA-------------SPARHPVRALILTPTRELADQVYESVKRYSKQTPLRS 125
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG+ Q+ L+ E++V TPGRL + + E+ V L + VLDEADRM++
Sbjct: 126 AVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHV---EQKNVNLSQVGILVLDEADRMLD 182
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +L+ II +LP +RQ L+FSAT +
Sbjct: 183 MGFLPDLERIIRLLP------------------------AQRQGLLFSATFS 210
>gi|336386445|gb|EGO27591.1| hypothetical protein SERLADRAFT_360268 [Serpula lacrymans var.
lacrymans S7.9]
Length = 520
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 137/264 (51%), Gaps = 51/264 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++++L + L+ ++ R+ + PT IQ ACIP G+D IG A+TGSGKT+AF LPI+
Sbjct: 79 SFDDLNISSPLLAALSRMSIRTPTEIQVACIPPLL-SGRDCIGNAKTGSGKTIAFALPIL 137
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q+L E+ P G + AL++TPTRELA Q++D + G+++R
Sbjct: 138 QKLSED-------------------PYG-IFALVLTPTRELAFQISDQFAVLGAGLSIRT 177
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELM--SGGEKHLVELHTLSFFVLDEADRM 351
IVGGM Q L RP +VV TPGR+ + + S GE L + F VLDEADR+
Sbjct: 178 AVIVGGMDMMTQALELDNRPHVVVATPGRIVDHLRSSSGEW---SLSRIKFLVLDEADRL 234
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 411
+ EL + D+LP K+RQT +F+AT+ S D
Sbjct: 235 LTPTFSPELSYLFDVLP------------------------KERQTCLFTATLTPSIDKL 270
Query: 412 KKLKHGSLKLKQSVNGLNS-IETL 434
++ K K ++ +N+ IET+
Sbjct: 271 AEVPPRPGKQKPFIHRMNANIETV 294
>gi|429463016|ref|YP_007184479.1| DEAD/DEAH box helicase family protein [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811795|ref|YP_007448250.1| ATP-dependent RNA helicase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|429338530|gb|AFZ82953.1| DEAD/DEAH box helicase family protein [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776953|gb|AGF47952.1| ATP-dependent RNA helicase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 467
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 46/232 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ L L+ ++ +I GF+ PTP+Q+A IP A + +D++ +A+TGSGKT AF LPI+
Sbjct: 2 SFENLGLNANILNAIKATGFESPTPVQQATIPKAILK-QDLVVSAQTGSGKTAAFMLPIL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-VR 292
Q L +EK A ++ L++TPTRELA+Q+T ++ +R
Sbjct: 61 QHL-----------------SEKKAQNTSIQVLVLTPTRELAMQITKAASVYGSNLHWLR 103
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
V IVGGM + Q + L R +++V TPGRL + M G L +HTL VLDEADRM+
Sbjct: 104 VATIVGGMPYKAQIKALSKRIDILVATPGRLIDQMQSGRVDLKNVHTL---VLDEADRML 160
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+ G ++Q+I+ LP K++QT++FSATI
Sbjct: 161 DMGFIDDIQTIVAELP------------------------KEKQTMLFSATI 188
>gi|329906289|ref|ZP_08274385.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
gi|327547309|gb|EGF32148.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
Length = 504
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 131/250 (52%), Gaps = 45/250 (18%)
Query: 157 DAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIG 216
D + + V ++E + F+ + L +++++ G+ PTPIQ A IP QG+D++G
Sbjct: 3 DIQTDAVPDSEPALRFEDFG---LSAEILRALADQGYDHPTPIQAAAIPVVL-QGRDVMG 58
Query: 217 AAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELA 275
AA+TG+GKT F LPI+Q LL + +P H +RALI+TPTRELA
Sbjct: 59 AAQTGTGKTAGFSLPIIQLLL-------------ANASNSASPARHPVRALILTPTRELA 105
Query: 276 LQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLV 335
QV +++K + +R + GGM Q L+A E+V+ TPGRL + + ++ +
Sbjct: 106 DQVAENVKAYCRHTPLRSTVVFGGMDMAPQTAALRAGVEIVIATPGRLLDHV---QQKTL 162
Query: 336 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKR 395
L V+DEADRM++ G +LQ II++LP KKR
Sbjct: 163 NLSQTQILVMDEADRMLDMGFLPDLQRIINLLP------------------------KKR 198
Query: 396 QTLVFSATIA 405
Q L+FSAT +
Sbjct: 199 QNLMFSATFS 208
>gi|295675961|ref|YP_003604485.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1002]
gi|295435804|gb|ADG14974.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1002]
Length = 484
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 42/244 (17%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
+S+ ++ + +++ L P ++K+I G+ PTPIQ IP G+D++GAA+TG+
Sbjct: 1 MSDTAVTPSTETFDQFGLAPDILKAIKESGYTSPTPIQAKAIPVVL-AGRDVMGAAQTGT 59
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDH 281
GKT +F LPI+QRLL + + +P H +RALI+TPTRELA QV +
Sbjct: 60 GKTASFSLPIIQRLLPQANTSA-------------SPARHPVRALILTPTRELADQVAAN 106
Query: 282 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 341
++ AK +R + GG+ Q L+ E+++ TPGRL + + ++ L +
Sbjct: 107 VQAYAKHTALRSAVVFGGVDMNPQSDQLRRGVEILIATPGRLLDHV---QQKTANLGQVQ 163
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 401
VLDEADRM++ G +LQ I+++LP K+RQTL+FS
Sbjct: 164 MLVLDEADRMLDMGFLPDLQRILNLLP------------------------KERQTLLFS 199
Query: 402 ATIA 405
AT +
Sbjct: 200 ATFS 203
>gi|339444851|ref|YP_004710855.1| hypothetical protein EGYY_12990 [Eggerthella sp. YY7918]
gi|338904603|dbj|BAK44454.1| hypothetical protein EGYY_12990 [Eggerthella sp. YY7918]
Length = 418
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 126/230 (54%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L + ++ RLGF EPTP+Q+ IP G+D++ AA+TG+GKT AF LP+++
Sbjct: 5 FEDLGLSEATLSTVARLGFTEPTPVQQQAIPLVL-AGRDVVAAAKTGTGKTAAFALPLIE 63
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL G+EA++ G R L++TPTRELA Q+ ++ +G VRV+
Sbjct: 64 RL-------------AGDEAKRR--PGSPRVLVVTPTRELAQQIDAACSDMTRGSRVRVL 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGGM + Q L ++++ TPGRL++LM G+ L + TL VLDEADRM++
Sbjct: 109 SVVGGMPYKGQIARLNKGIDILIATPGRLFDLMQRGDVKLDRVETL---VLDEADRMLDM 165
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G + ++ I+ P + RQTL+FSATI
Sbjct: 166 GFWPTMKKIVAATPAS------------------------RQTLLFSATI 191
>gi|113969505|ref|YP_733298.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-4]
gi|113884189|gb|ABI38241.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-4]
Length = 409
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 130/231 (56%), Gaps = 42/231 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L LH L+ ++ LG+++PTPIQ IPA + +D++ A+TG+GKT AF LP++
Sbjct: 2 SFSALSLHSQLVNTLAELGYQQPTPIQIEAIPAILAK-QDVMAGAQTGTGKTAAFALPVL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q+LL L+ + ++A K +RAL++ PTRELA+QV + AKG ++R+
Sbjct: 61 QQLL---------LDNQSQDAPK-----DIRALVLVPTRELAVQVQQSFGKYAKGTDIRI 106
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
GG+S E Q+ KA ++++ TPGRL + + G + L LS V DEADRM++
Sbjct: 107 GIAYGGVSIEAQQAEFKAGIDVLIATPGRLLDHLRQGA---LNLKHLSVLVFDEADRMLD 163
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G E+++++ +P +RQTL+FSAT+
Sbjct: 164 MGFMDEIKAVLKQVP------------------------AQRQTLLFSATL 190
>gi|319778596|ref|YP_004129509.1| ATP-dependent RNA helicase [Taylorella equigenitalis MCE9]
gi|317108620|gb|ADU91366.1| ATP-dependent RNA helicase [Taylorella equigenitalis MCE9]
Length = 581
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 126/238 (52%), Gaps = 36/238 (15%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L + L+KS+ R+ F+ PT +Q IP A +GKD+I +A+TGSGKT AF LP +Q
Sbjct: 6 FADLGIEQTLLKSLERIDFRNPTEVQVKSIPLAL-KGKDLIVSAQTGSGKTAAFMLPSIQ 64
Query: 235 RLLEEREK-------AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
+LL E E A K +++ +E PK ++ L++TPTRELA+QV+D KE
Sbjct: 65 QLLHELETRPAPEQIASKSSKQRKRRSEANPPKYGVQILVLTPTRELAMQVSDATKEFIY 124
Query: 288 GI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
G V + +VGGM+ Q L E+VV TPGRL + + G V L L +LD
Sbjct: 125 GFKGVHIATLVGGMAYGPQINSLSREVEIVVATPGRLLDHIKAGR---VNLRNLKILILD 181
Query: 347 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
EADRM++ G ++ +++ P RQTL+FSAT
Sbjct: 182 EADRMLDMGFIHDINNVVAETP------------------------DDRQTLLFSATF 215
>gi|119578414|gb|EAW58010.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_a [Homo
sapiens]
Length = 634
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 142/240 (59%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 200 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 258
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 259 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 307
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDE
Sbjct: 308 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDE 364
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 365 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 423
>gi|348026760|ref|YP_004766565.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
elsdenii DSM 20460]
gi|341822814|emb|CCC73738.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
elsdenii DSM 20460]
Length = 526
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 127/233 (54%), Gaps = 46/233 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
+ + L + ++++++ +GF+EPTPIQ IP A G D+IG A+TG+GKT A+G+P
Sbjct: 2 LEQFQNLNISEVIIRALNEMGFEEPTPIQAESIPVAM-SGSDMIGQAQTGTGKTAAYGIP 60
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
+++++L K P ++ ++++PTRELA+QV + L +A+ N+
Sbjct: 61 VLEKIL------------------KAEPSKDIQTVVLSPTRELAMQVAEELNHLAQFTNI 102
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ +PI GG E+Q R L+ P+++V TPGRL + M G ++L ++ VLDEAD M
Sbjct: 103 QALPIYGGQDMERQLRRLRKCPQIIVATPGRLIDHMKRGT---IDLSHITTIVLDEADEM 159
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++ G ++ I+ P T RQTL+FSAT+
Sbjct: 160 LDMGFIDDINIIMAATPNT------------------------RQTLLFSATM 188
>gi|339998715|ref|YP_004729598.1| ATP-dependent RNA helicase rhlE [Salmonella bongori NCTC 12419]
gi|339512076|emb|CCC29797.1| putative ATP-dependent RNA helicase rhlE [Salmonella bongori NCTC
12419]
Length = 451
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 142/251 (56%), Gaps = 47/251 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L LHP ++++I G++EPTPIQ+ IPA +G+D++ +A+TG+GKT F LP++
Sbjct: 2 SFDSLGLHPDILRAIAGQGYREPTPIQQQAIPAVL-EGRDLMASAQTGTGKTAGFSLPLL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q L+ ++ A KG +RALI+TPTRELA Q+ +++++ ++ +N+R
Sbjct: 61 QHLITQQPHA------KGRRP--------VRALILTPTRELAAQIGENIRDYSQYLNIRS 106
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ + GG+S Q L+ +++V TPGRL +L ++ V+L + VLDEADRM++
Sbjct: 107 LVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRMLD 163
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR-- 411
G +++ ++ LP KRQ L+FSAT S D +
Sbjct: 164 MGFIHDIRRVLAKLP------------------------PKRQNLLFSAT--FSDDIKAL 197
Query: 412 -KKLKHGSLKL 421
+KL H L++
Sbjct: 198 AEKLLHNPLEI 208
>gi|399116968|emb|CCG19780.1| ATP-dependent rna helicase [Taylorella asinigenitalis 14/45]
Length = 562
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 129/240 (53%), Gaps = 39/240 (16%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L + +L+KS+ R+ F+ PT +Q IP A +GKD+I +A+TGSGKT AF LP +Q
Sbjct: 6 FADLGIEQILLKSLERIDFRNPTEVQVKSIPLAL-EGKDLIVSAQTGSGKTAAFMLPSIQ 64
Query: 235 RLLEERE---------KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
RLL E E KA +KG+ PK ++ L++TPTRELA+QV D KE
Sbjct: 65 RLLHELETRPQTEEISKAKSSRRKKGKPTAN-PPKYGVQILVLTPTRELAMQVADATKEF 123
Query: 286 AKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
G V + +VGGM+ Q L E++V TPGRL + + G V+LH L +
Sbjct: 124 IYGFKGVHIATLVGGMAYGPQINSLSREVEIIVATPGRLLDHIKAGR---VKLHNLKVLI 180
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
LDEADRM++ G ++++++ P ++QTL+FSAT
Sbjct: 181 LDEADRMLDMGFIHDIKNVVAETP------------------------DEKQTLLFSATF 216
>gi|115454875|ref|NP_001051038.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|75320262|sp|Q53RK8.1|RH21_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 21
gi|62733557|gb|AAX95674.1| DEAD/DEAH box helicase, putative [Oryza sativa Japonica Group]
gi|108710689|gb|ABF98484.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|108710690|gb|ABF98485.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|108710691|gb|ABF98486.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113549509|dbj|BAF12952.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|125545447|gb|EAY91586.1| hypothetical protein OsI_13221 [Oryza sativa Indica Group]
gi|125587655|gb|EAZ28319.1| hypothetical protein OsJ_12293 [Oryza sativa Japonica Group]
gi|215697317|dbj|BAG91311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 736
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 128/230 (55%), Gaps = 23/230 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W+E +L L++++ + G+KEP+PIQ A IP Q +D+IG AETGSGKT AF LP++
Sbjct: 317 WSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQ-RDVIGIAETGSGKTAAFVLPMLS 375
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ L EE E P A+++ PTRELA Q+ + + A + ++VV
Sbjct: 376 YITR--------LPPISEENEAEGPY----AVVMAPTRELAQQIEEETVKFATYLGIKVV 423
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VLDEADRMI+
Sbjct: 424 SIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCL---ERRYAVLNQCNYVVLDEADRMIDM 480
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++ ++D +P +N E + E+ R T +FSAT+
Sbjct: 481 GFEPQVVGVLDAMPSSNLKPENEDEELDAKTIY-------RTTYMFSATM 523
>gi|348590699|ref|YP_004875161.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
gi|347974603|gb|AEP37138.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
Length = 562
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 129/240 (53%), Gaps = 39/240 (16%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L + +L+KS+ R+ F+ PT +Q IP A +GKD+I +A+TGSGKT AF LP +Q
Sbjct: 6 FADLGIEQILLKSLERIDFRNPTEVQVKSIPLAL-EGKDLIVSAQTGSGKTAAFMLPSIQ 64
Query: 235 RLLEERE---------KAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEV 285
RLL E E KA ++G+ PK ++ L++TPTRELA+QV D KE
Sbjct: 65 RLLHELETRPQTEEISKAKSSRRKRGKSTAN-PPKYGVQILVLTPTRELAMQVADATKEF 123
Query: 286 AKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
G V + +VGGM+ Q L E++V TPGRL + + G V+LH L +
Sbjct: 124 IYGFKGVHIATLVGGMAYGPQINSLSREVEIIVATPGRLLDHIKAGR---VKLHNLKVLI 180
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
LDEADRM++ G ++++++ P ++QTL+FSAT
Sbjct: 181 LDEADRMLDMGFIHDIKNVVAETP------------------------DEKQTLLFSATF 216
>gi|422932838|ref|ZP_16965763.1| ATP-dependent RNA helicase DeaD [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|339892024|gb|EGQ80925.1| ATP-dependent RNA helicase DeaD [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 296
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 116/190 (61%), Gaps = 24/190 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K + + G++ PTPIQ+ IPA KDIIG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
E + +++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ETFEHLDYIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG S + Q +L+K ++VVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 355 GHFRELQSII 364
G +++ I+
Sbjct: 166 GFVEDIEKIL 175
>gi|328870452|gb|EGG18826.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 507
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 164/323 (50%), Gaps = 62/323 (19%)
Query: 117 VQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVSEAEISTEFDAWN 176
V K++E N N K K +++ I + EE +G D E + E +T FD
Sbjct: 38 VIKKEESN--NNKKKVLEREALDDVISSDEED----DGIDKVENSKLDE---NTTFD--- 85
Query: 177 ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL 236
+L +HP ++++ R+GFK+PT IQ+ IP A G+DIIG A+TGSGKT AF +PI+Q+L
Sbjct: 86 QLGMHPQIIEACVRMGFKKPTEIQRESIPHAI-AGRDIIGLAQTGSGKTAAFAIPILQQL 144
Query: 237 LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPI 296
L+ + L ALI++PTRELA Q++ + + I V+ +
Sbjct: 145 LQSPQP--------------------LFALILSPTRELAFQISQQFEALGAVIGVKCGVL 184
Query: 297 VGGMSTEKQERLLKARPELVVGTPGR-LWELMSGGEKHLVELHTLSFFVLDEADRMIENG 355
VGGM +Q +L +P ++VGTPGR ++ L + H L L F V+DEADR++
Sbjct: 185 VGGMDVMQQAMVLARKPHIIVGTPGRVMYHLENTKGFH---LKALKFLVMDEADRLLSMD 241
Query: 356 HFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-ALSADFRKKL 414
E+ I+ ++P K R T +FSAT+ + A +K
Sbjct: 242 FEEEINKILKVIP------------------------KNRNTYLFSATMTSKVAKLQKAS 277
Query: 415 KHGSLKLKQSVNGLNSIETLSER 437
+K++ + ++++TL ++
Sbjct: 278 LVNPIKVQVASTKYSTVDTLVQQ 300
>gi|345515892|ref|ZP_08795389.1| ATP-dependent RNA helicase DeaD [Bacteroides dorei 5_1_36/D4]
gi|229436523|gb|EEO46600.1| ATP-dependent RNA helicase DeaD [Bacteroides dorei 5_1_36/D4]
Length = 434
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 125/230 (54%), Gaps = 46/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K++ + G+ PTPIQ+ IP +GKD++G A+TG+GKT AF +P++Q
Sbjct: 3 FKELDLIEPILKALQQTGYTTPTPIQEQAIPVLL-KGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL + K G ++ALI+TPTRELA+Q+ ++ + AK V+
Sbjct: 62 RLYQSDHKKG------------------IKALILTPTRELAIQIGENFDQYAKYAGVKHA 103
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + Q LK ++++ TPGRL +L S G + L L +FVLDEADRM++
Sbjct: 104 VIFGGVPQKAQVDALKRGVQVLIATPGRLLDLQSQG---CISLKGLEYFVLDEADRMLDM 160
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ ++ ++P +RQTL FSAT+
Sbjct: 161 GFIHDIKKVLKLIPA------------------------RRQTLFFSATM 186
>gi|410078383|ref|XP_003956773.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
gi|372463357|emb|CCF57638.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
Length = 739
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 123/231 (53%), Gaps = 45/231 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+N L L ++K + LGF +P+PIQ A IP A GKDI+ A TGSGKT AF +PI++
Sbjct: 216 FNTLNLSRPVLKGLSSLGFTKPSPIQSATIPIAL-LGKDIVAGAVTGSGKTAAFMIPIIE 274
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RLL K A R +I+TPTRELA+Q++D K++ +N
Sbjct: 275 RLL-----------------YKPAKVASTRVVILTPTRELAIQISDVAKKIGHFVNGLTF 317
Query: 295 PI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ VGG++ +QE++LK+RP++V+ TPGR + + V+ + VLDEADRM+E
Sbjct: 318 GLAVGGLNLRQQEQILKSRPDIVIATPGRFIDHVRNSASFSVD--RVEILVLDEADRMLE 375
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G EL I+ +LP +RQ L+FSAT+
Sbjct: 376 EGFQDELSEIMTLLPT------------------------RRQNLLFSATM 402
>gi|335998488|ref|ZP_08564399.1| ATP-dependent RNA helicase [Lactobacillus ruminis SPM0211]
gi|335348343|gb|EGM49849.1| ATP-dependent RNA helicase [Lactobacillus ruminis SPM0211]
Length = 506
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 128/233 (54%), Gaps = 48/233 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
F +NEL L L+K+I R GF+E TPIQ+A IP G D+IG A+TG+GKT AFGLP
Sbjct: 9 FLKFNELGLEEDLLKAIKRSGFEEATPIQEATIPLVL-AGIDVIGQAQTGTGKTAAFGLP 67
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
I+Q + + E H++A++++PTRELA+Q + L + K
Sbjct: 68 ILQHVDVKEE--------------------HIQAIVVSPTRELAIQTQEELYRLGKDKRA 107
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+V + GG +Q +LLK P+++VGTPGRL + ++ + V+L + VLDEAD M
Sbjct: 108 KVQVVYGGADIRRQIKLLKHVPQILVGTPGRLLDHIN---RKTVDLSHVKTLVLDEADEM 164
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++ G ++++II +P ++RQTL+FSAT+
Sbjct: 165 LDMGFLEDIEAIIKNVP------------------------EERQTLLFSATM 193
>gi|332023103|gb|EGI63364.1| Putative ATP-dependent RNA helicase DDX23 [Acromyrmex echinatior]
Length = 789
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 143/232 (61%), Gaps = 16/232 (6%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E ++ I ++G+K+ TPIQ+ IP Q +DIIG AETGSGKTLAF +P++
Sbjct: 362 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGL-QNRDIIGVAETGSGKTLAFLIPLL 420
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 421 LWITS----LPKI--ERLEEADQ-GP----YSIILAPTRELAQQIEEETNKFGQPLGIRT 469
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 470 VVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMID 526
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 527 MGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 578
>gi|149641853|ref|XP_001511203.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Ornithorhynchus
anatinus]
Length = 812
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 113/207 (54%), Gaps = 30/207 (14%)
Query: 263 LRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGR 322
L L++TPTRELA+QV H+ VA+ ++ +VGGM+ +KQ+R+L RPE+V+ TPGR
Sbjct: 355 LLGLVLTPTRELAVQVKHHIDAVARFTGIKTALLVGGMAAQKQQRVLNRRPEIVIATPGR 414
Query: 323 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQ 382
LWEL+ HL L L V+DEADRM+E GHF EL +++ML N+ Q
Sbjct: 415 LWELIKEKHPHLSNLRRLRCLVIDEADRMVERGHFAELSQLLEML------NDSQYN--- 465
Query: 383 TCVTVSSLQRKKRQTLVFSATIALSAD-----FRKKLKHGSLKLKQSVNGLNSIETLSER 437
+RQT VFSAT+ L + F+KK KH ++ ++ L ++
Sbjct: 466 ----------PRRQTFVFSATLTLVHEVPARVFQKK-KHA-----HKLDTKTKLDQLVQK 509
Query: 438 AGMRANVAIVDLTNVSVLANKLEESFI 464
GMR ++DLT L E+ I
Sbjct: 510 IGMRGKPKVIDLTRKEATVEALTETRI 536
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 162 LVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETG 221
L A+ T+ AW +L + +++++ LGF+ PTPIQ + A DI+GAAETG
Sbjct: 190 LSGSADGETDMSAWKDLFVPKPVLRALSSLGFEAPTPIQALTLTPAIRDNLDILGAAETG 249
Query: 222 SGKTLAFGLPIMQRLLEER 240
SGKTLAF +P++ +L R
Sbjct: 250 SGKTLAFAIPMIHSVLRWR 268
>gi|449547452|gb|EMD38420.1| hypothetical protein CERSUDRAFT_105018 [Ceriporiopsis subvermispora
B]
Length = 758
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 129/238 (54%), Gaps = 16/238 (6%)
Query: 167 EISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTL 226
+I +W E + +++ I ++G+KEP+PIQ+ IP Q +DIIG AETGSGKT
Sbjct: 325 QIPHPLRSWKESIIPSEILEVIDKIGYKEPSPIQRQAIPIGL-QNRDIIGIAETGSGKTA 383
Query: 227 AFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 286
AF +P++ + + L +E P ALI+ PTRELA Q+ K+ A
Sbjct: 384 AFVIPMLSFISK--------LPPFTDEIRHLGPY----ALIMAPTRELAQQIESETKKFA 431
Query: 287 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
+ V IVGG S E+Q+ L++ E+++ TPGRL +++ E+H++ L + V+D
Sbjct: 432 GPLGFTCVSIVGGRSVEEQQFNLRSGAEIIIATPGRLKDVI---ERHVIVLSQCRYVVMD 488
Query: 347 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
EADRM+ G +L I+D LP E Q EQ + + R T +FSAT+
Sbjct: 489 EADRMVNLGFEVDLTFILDKLPSDTMEGEDQGEQMDVDGETMIKKGRNRVTTLFSATM 546
>gi|19114126|ref|NP_593214.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351656|sp|Q09903.1|DRS1_SCHPO RecName: Full=ATP-dependent RNA helicase drs1
gi|1065890|emb|CAA91889.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe]
Length = 754
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 123/244 (50%), Gaps = 48/244 (19%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
++T ++ + L ++K + LGF+ PT IQ IP A GKDI+GAA TGSGKT A
Sbjct: 254 MTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLAL-LGKDIVGAAVTGSGKTAA 312
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEV 285
F +PI++RLL Y PK R LI+ PTRELA+Q ++
Sbjct: 313 FIVPILERLL-------------------YRPKKVPTTRVLILCPTRELAMQCHSVATKI 353
Query: 286 AKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVL 345
A ++ V +GG+S + QE+ L+ RP++V+ TPGR + M + VE + V+
Sbjct: 354 ASFTDIMVCLCIGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVE--NIEIMVM 411
Query: 346 DEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
DEADRM+E+G EL II P K RQT++FSAT+
Sbjct: 412 DEADRMLEDGFADELNEIIQACP------------------------KSRQTMLFSATMT 447
Query: 406 LSAD 409
D
Sbjct: 448 DKVD 451
>gi|298482320|ref|ZP_07000507.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
gi|298271607|gb|EFI13181.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
Length = 374
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 130/230 (56%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + ++K+I G+ PTPIQ+ IP A + +DI+G A+TG+GKT +F +PI+Q
Sbjct: 3 FKELNITEPILKAIEEKGYTVPTPIQEKAIPPALAK-RDILGCAQTGTGKTASFAIPIIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L ++E A +G ++ALI+TPTRELALQ+++ + + +K +R
Sbjct: 62 HLQLDKEAA----RRQG-----------IKALILTPTRELALQISECIDDYSKHTRIRHG 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG++ Q LL+ +++V TPGRL +LM+ G H L T+ +FVLDEADRM++
Sbjct: 107 VIFGGVNQRPQVDLLRKGIDILVATPGRLLDLMTQGHIH---LDTIQYFVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+ LP K++QTL FSAT+
Sbjct: 164 GFIHDIKRILPKLP------------------------KEKQTLFFSATM 189
>gi|323340095|ref|ZP_08080360.1| ATP-dependent RNA helicase DeaD [Lactobacillus ruminis ATCC 25644]
gi|323092472|gb|EFZ35079.1| ATP-dependent RNA helicase DeaD [Lactobacillus ruminis ATCC 25644]
Length = 506
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 128/233 (54%), Gaps = 48/233 (20%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
F +NEL L L+K+I R GF+E TPIQ+A IP G D+IG A+TG+GKT AFGLP
Sbjct: 9 FLKFNELGLEEDLLKAIKRSGFEEATPIQEATIPLVL-AGIDVIGQAQTGTGKTAAFGLP 67
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
I+Q + + E H++A++++PTRELA+Q + L + K
Sbjct: 68 ILQHVDVKEE--------------------HIQAIVVSPTRELAIQTQEELYRLGKDKRA 107
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+V + GG +Q +LLK P+++VGTPGRL + ++ + V+L + VLDEAD M
Sbjct: 108 KVQVVYGGADIRRQIKLLKHVPQILVGTPGRLLDHIN---RKTVDLSHVKTLVLDEADEM 164
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++ G ++++II +P ++RQTL+FSAT+
Sbjct: 165 LDMGFLEDIEAIIKNVP------------------------EERQTLLFSATM 193
>gi|218132094|ref|ZP_03460898.1| hypothetical protein BACEGG_03721 [Bacteroides eggerthii DSM 20697]
gi|217985744|gb|EEC52085.1| DEAD/DEAH box helicase [Bacteroides eggerthii DSM 20697]
Length = 392
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 129/235 (54%), Gaps = 45/235 (19%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
T F + +L + ++K+I G+ PTPIQ IPA GKDI+G A+TG+GKT AF
Sbjct: 18 TTFMTFKDLNITESILKAIEEKGYVNPTPIQAKAIPALL-VGKDILGCAQTGTGKTAAFA 76
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 289
+PI+Q+L +A K L ++ALI+TPTRELALQ+++ + + AK
Sbjct: 77 IPIIQQL-----QADKSLNNS------------IKALILTPTRELALQISECIDDYAKYT 119
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
VR I GG++ Q +L +++V TPGRL +LM+ G V L+ + FVLDEAD
Sbjct: 120 QVRHGVIFGGVNQRTQVNMLHKGVDILVATPGRLLDLMNQG---YVRLNNIQHFVLDEAD 176
Query: 350 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
RM++ G +++ ++ LP K++QTL+FSAT+
Sbjct: 177 RMLDMGFIHDIKRLLPKLP------------------------KEKQTLLFSATM 207
>gi|367019066|ref|XP_003658818.1| hypothetical protein MYCTH_2295090 [Myceliophthora thermophila ATCC
42464]
gi|347006085|gb|AEO53573.1| hypothetical protein MYCTH_2295090 [Myceliophthora thermophila ATCC
42464]
Length = 707
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 17/238 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W E L L+ ++ +G+ EPTPIQ+A IP A Q +D+IG A TGSGKT A
Sbjct: 266 IPNPMRSWEESNLPRRLLDIVHSVGYDEPTPIQRAAIPIAL-QARDLIGVAVTGSGKTAA 324
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F LP++ + E L E + YA LI+ PTREL Q+ ++ A
Sbjct: 325 FLLPLLVYISEL-----PPLTEYNKNDGPYA-------LILAPTRELVQQIESEARKFAD 372
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ VV IVGG S E+Q L+ E++V TPGRL + + E+ L+ + ++DE
Sbjct: 373 PLGFTVVSIVGGHSLEEQAFSLRNGAEIIVATPGRLVDCL---ERRLLVFSQCCYIIMDE 429
Query: 348 ADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G L I+D LP+ N + ++E +Q + + RQT++++AT+
Sbjct: 430 ADRMIDQGFEEPLTKILDALPVANEKPDTEEAENSQLMSRYLGGKDRYRQTMMYTATM 487
>gi|46124943|ref|XP_387025.1| hypothetical protein FG06849.1 [Gibberella zeae PH-1]
gi|91207408|sp|Q4I7F9.1|PRP28_GIBZE RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
Length = 721
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 130/238 (54%), Gaps = 17/238 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W E L L+ + +G+K+P+PIQ+A IP A Q +D+IG A TGSGKT A
Sbjct: 283 IPNPMRSWQESNLPQRLLNIVDDVGYKDPSPIQRAAIPIAL-QARDLIGVAVTGSGKTAA 341
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F LP++ + + L+E + YA LI+ PTREL Q+ ++ A
Sbjct: 342 FLLPLLVYISDL-----PPLDEINKHDGPYA-------LIMAPTRELVQQIETEARKFAG 389
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ RVV IVGG E+Q L+ E+VV TPGRL + + E+ L+ L + ++DE
Sbjct: 390 PLGFRVVSIVGGHQIEEQAYNLRDGAEIVVATPGRLLDCI---ERRLLVLSQCCYVIMDE 446
Query: 348 ADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G + I+D LP+TN + ++E Q + + RQT++++AT+
Sbjct: 447 ADRMIDLGFEESVNKILDALPVTNEKPDTDEAENAQIMQRYLGGRDRYRQTMMYTATM 504
>gi|339503881|ref|YP_004691301.1| ATP-dependent RNA helicase RhlE [Roseobacter litoralis Och 149]
gi|338757874|gb|AEI94338.1| putative ATP-dependent RNA helicase RhlE [Roseobacter litoralis Och
149]
Length = 433
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 130/235 (55%), Gaps = 46/235 (19%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
++F+ N L P L+ + R+G +PTPIQK IP A + G+D++G A+TG+GKT AFG
Sbjct: 2 SDFEMMN---LPPELVARLGRMGLNDPTPIQKQAIPHAMN-GRDVMGLAQTGTGKTAAFG 57
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 289
+P++ +MLE G A K +R L++ PTRELA Q++ +L+ A+
Sbjct: 58 VPLV----------AQMLELDGRPAPK-----SVRGLVLAPTRELATQISVNLRSFAENT 102
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
V+V +VGG S Q + L+ +L+V TPGRL +LM ++ V L F VLDEAD
Sbjct: 103 KVKVAMVVGGQSINNQIKRLERGVDLLVATPGRLLDLM---DRRAVRLDETVFLVLDEAD 159
Query: 350 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+M++ G +L+ I ++P K+RQT++FSAT+
Sbjct: 160 QMLDMGFIHDLRKIASVIP------------------------KERQTMLFSATM 190
>gi|237707985|ref|ZP_04538466.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 9_1_42FAA]
gi|229457971|gb|EEO63692.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 9_1_42FAA]
Length = 434
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 125/230 (54%), Gaps = 46/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K++ + G+ PTPIQ+ IP +GKD++G A+TG+GKT AF +P++Q
Sbjct: 3 FKELDLIEPILKALQQTGYTTPTPIQEQAIPVLL-KGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL + K G ++ALI+TPTRELA+Q+ ++ + AK V+
Sbjct: 62 RLYQSDYKKG------------------IKALILTPTRELAIQIGENFDQYAKYTGVKHA 103
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + Q LK ++++ TPGRL +L S G + L L +FVLDEADRM++
Sbjct: 104 VIFGGVPQKAQVDALKRGVQVLIATPGRLLDLQSQG---CISLKGLEYFVLDEADRMLDM 160
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ ++ ++P +RQTL FSAT+
Sbjct: 161 GFIHDIKKVLKLIPA------------------------RRQTLFFSATM 186
>gi|408399032|gb|EKJ78157.1| hypothetical protein FPSE_01618 [Fusarium pseudograminearum CS3096]
Length = 793
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 122/238 (51%), Gaps = 48/238 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ + L +M+ + +GF +PTPIQ IP A GKD++G AETGSGKT AF LPI+
Sbjct: 258 SFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIAL-MGKDVVGGAETGSGKTGAFILPIL 316
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINV 291
+RLL Y PK R +++ PTRELA+Q ++A ++
Sbjct: 317 ERLL-------------------YRPKKIPTTRVVVLLPTRELAIQCHAVATKLAAFTDI 357
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ VGG+S + QE LK RP++++ TPGR + M V+ T+ VLDEADRM
Sbjct: 358 KFTLAVGGLSLKAQELELKLRPDVIIATPGRFIDHMRNSASFSVD--TVEILVLDEADRM 415
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+E+G EL I+ LP K RQT++FSAT+ S D
Sbjct: 416 LEDGFAEELNEILTTLP------------------------KSRQTMLFSATMTSSVD 449
>gi|296114606|ref|ZP_06833259.1| DEAD/DEAH box helicase domain protein [Gluconacetobacter hansenii
ATCC 23769]
gi|295978962|gb|EFG85687.1| DEAD/DEAH box helicase domain protein [Gluconacetobacter hansenii
ATCC 23769]
Length = 593
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 129/242 (53%), Gaps = 43/242 (17%)
Query: 181 HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEER 240
HP L +++ G++ PTP+Q A + AA G+D++ +A+TGSGKT+AFGL + LL
Sbjct: 7 HPALQRALDEQGYENPTPVQTAVLDVAA-DGRDLLVSAQTGSGKTVAFGLAMADTLLGGD 65
Query: 241 EKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGM 300
E+ G P G A+II PTRELA+QVT L + R+V +GGM
Sbjct: 66 ERLG--------------PAGAPLAVIIAPTRELAMQVTRELTWLYAAAGARIVSCIGGM 111
Query: 301 STEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 360
++ R L+ +VVGTPGRL + +S G + +L + VLDEAD M++ G EL
Sbjct: 112 DARREARALQIGAHIVVGTPGRLCDHLSRGRLVMTDLRVV---VLDEADEMLDLGFRDEL 168
Query: 361 QSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS-ADFRKKLKHGSL 419
+ ++D +P K R+TL+FSATIA A K+ +H +L
Sbjct: 169 EQLLDAMP------------------------KTRRTLLFSATIAREIASLAKRYQHDAL 204
Query: 420 KL 421
++
Sbjct: 205 RI 206
>gi|260584701|ref|ZP_05852447.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Granulicatella
elegans ATCC 700633]
gi|260157724|gb|EEW92794.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Granulicatella
elegans ATCC 700633]
Length = 509
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 131/252 (51%), Gaps = 55/252 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NEL L L++SI ++GF+E TPIQ IP A GKD+IG A+TG+GKT +FGLP++Q
Sbjct: 3 FNELGLDSALLESIEKMGFEEATPIQSQTIPLAL-AGKDVIGQAQTGTGKTASFGLPMLQ 61
Query: 235 RL-LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
++ L R+ G L+I PTRELA+Q + L + K + V
Sbjct: 62 KINLRNRKVQG---------------------LVIAPTRELAIQTQEELYRLGKDKKIHV 100
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG +Q R LK +P +VVGTPGRL + +S + + L + VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRQLKDQPHIVVGTPGRLLDHIS---RKTLRLDNIETLVLDEADEMLN 157
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSA 408
G +++SII ++P + RQTL+FSAT+ +
Sbjct: 158 MGFLEDIESIIKLVP------------------------ENRQTLLFSATMPDDIKRIGV 193
Query: 409 DFRKKLKHGSLK 420
F K+ +H +K
Sbjct: 194 QFMKEPEHVRIK 205
>gi|319902651|ref|YP_004162379.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
gi|319417682|gb|ADV44793.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
Length = 422
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 147/293 (50%), Gaps = 73/293 (24%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ L+L ++K++ G+ PTPIQ+ IP QGKD++G A+TG+GKT AF +PI+Q
Sbjct: 3 FENLKLIEPILKALQEEGYSTPTPIQEKSIPILL-QGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L + + G ++ALI+TPTRELA+Q+ + + K ++
Sbjct: 62 KLYKTDNRKG------------------IKALILTPTRELAIQIGESFEAYGKYTGLKHT 103
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + Q LK ++++ TPGRL +L++ G + L TL FFVLDEADRM++
Sbjct: 104 VIFGGVGQKPQTDDLKRGTQILIATPGRLQDLVNQG---FINLKTLDFFVLDEADRMLDM 160
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
G +++ I+ MLP +RQTL FSAT+
Sbjct: 161 GFIHDIRRILKMLPT------------------------QRQTLFFSATMP--------- 187
Query: 415 KHGSLKLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLEES--FIE 465
+ IETL+ M +N A V++T VS + + +S F+E
Sbjct: 188 --------------SEIETLAN--SMLSNPAKVEVTPVSSTVDTISQSVYFVE 224
>gi|146292298|ref|YP_001182722.1| DEAD/DEAH box helicase [Shewanella putrefaciens CN-32]
gi|386312973|ref|YP_006009138.1| DEAD/DEAH box helicase [Shewanella putrefaciens 200]
gi|145563988|gb|ABP74923.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens
CN-32]
gi|319425598|gb|ADV53672.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens 200]
Length = 433
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ P ++++I G+++ TPIQ+ IPA +G+D++ +A+TG+GKT AF LPI+Q
Sbjct: 3 FESFSFSPEILRAISDCGYQQMTPIQQQAIPAI-RRGQDVLASAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
KM+E+ E K + R LI+TPTRELA QV D++ K +N V+
Sbjct: 62 ----------KMVEKPSETL-----KSNARVLILTPTRELAAQVADNVTAYCKYLNFSVL 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ E Q + LK +++V TPGRL E ++ V L + F VLDEADRM++
Sbjct: 107 TIYGGVKIETQAQKLKRGADVIVATPGRLLEHLTACN---VSLSNVDFLVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G ++Q I+ + KKRQ L+FSAT +
Sbjct: 164 GFSADIQKILQAV------------------------NKKRQNLLFSATFS 190
>gi|410081467|ref|XP_003958313.1| hypothetical protein KAFR_0G01440 [Kazachstania africana CBS 2517]
gi|372464901|emb|CCF59178.1| hypothetical protein KAFR_0G01440 [Kazachstania africana CBS 2517]
Length = 719
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 157/310 (50%), Gaps = 50/310 (16%)
Query: 170 TEFDAWNEL-RLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAF 228
E W +L + ++ + +LGF +PT IQ IP DI+G A TGSGKTLA+
Sbjct: 131 VELPEWTKLAKFSMTTLQGLAKLGFTKPTEIQAKTIPLGL-GNHDIMGKASTGSGKTLAY 189
Query: 229 GLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRA--LIITPTRELALQVTDHLKEVA 286
G+P+++ ++ + K + RA LI TPTRELA QVT HL +V+
Sbjct: 190 GIPMLENFVKS-----------------FKSKDNNRAIGLIFTPTRELAQQVTQHLTKVS 232
Query: 287 KGI-----NVRVVPIVGGMSTEKQERLLKARP--ELVVGTPGRLWELMSGGEKHLVELHT 339
+ I ++ + GG+S +KQERLLK + ++V+ TPGR EL+ + +
Sbjct: 233 ELILKEKNKYAILSLTGGLSIQKQERLLKYQGSGKIVIATPGRFLELLEKNNELIERFGK 292
Query: 340 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLV 399
+ VLDEADR++++GHF E + I+ +L G+ +S ++ QT++
Sbjct: 293 IDTLVLDEADRLLQDGHFDEFEKILKLL----GNYRKKSSKSHW------------QTMI 336
Query: 400 FSATIALSADFRKKLKHGSLKLKQSVNGLNSIET----LSERAGMRANVAIVDLTNVSVL 455
FSAT S D KL K +G N +ET L + ++ IVD +
Sbjct: 337 FSAT--FSTDLFNKLASNHNHNKNKNDGENEMETVLKHLMTKIHFKSKPVIVDTNPDEKV 394
Query: 456 ANKLEESFIE 465
+++++ES IE
Sbjct: 395 SSQIKESLIE 404
>gi|330831232|ref|YP_004394184.1| DEAD box family ATP-dependent RNA helicase [Aeromonas veronii B565]
gi|423208115|ref|ZP_17194669.1| hypothetical protein HMPREF1169_00187 [Aeromonas veronii AER397]
gi|328806368|gb|AEB51567.1| ATP-dependent RNA helicase, DEAD box family [Aeromonas veronii
B565]
gi|404619162|gb|EKB16078.1| hypothetical protein HMPREF1169_00187 [Aeromonas veronii AER397]
Length = 406
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 143/259 (55%), Gaps = 54/259 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL LHP L+ S+ + + PT IQ+ IPAA G+D++ A+TGSGKTLAFGLP++Q
Sbjct: 3 FSELALHPDLLASLP-VTLQTPTRIQQLAIPAALA-GQDLLALAQTGSGKTLAFGLPLLQ 60
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL ++ L++ PTRELA+QVT LKE A+ + +R+V
Sbjct: 61 RL--------------------DPASSQVQGLVLVPTRELAIQVTAALKEGAEALGLRIV 100
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG++ E+Q+ L P+L+V TPGRL +L++ + ++ L L VLDEADR++E
Sbjct: 101 TLCGGVAQERQQAELALGPQLLVATPGRLRDLLT---QQVLGLDGLQLLVLDEADRLLEM 157
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKL 414
G ++++++ +P RQTL+FSAT L A+ + L
Sbjct: 158 GFAPDIKALLGFIP------------------------ADRQTLLFSAT--LPAEL-ETL 190
Query: 415 KHGSLK--LKQSVNGLNSI 431
+G L+ + N LNS+
Sbjct: 191 ANGLLREPTRIEANPLNSV 209
>gi|348502929|ref|XP_003439019.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Oreochromis
niloticus]
Length = 806
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 133/232 (57%), Gaps = 17/232 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L +++ I + G+K+PTPIQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 379 WKEYPLPAHILEVIDKCGYKDPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFLIPLLV 437
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K ++ E P A+I+ PTRELA Q+ + + K + +R V
Sbjct: 438 -WITTLPKIDRI------EDSDQGPY----AVILAPTRELAQQIEEETIKFGKPLGIRTV 486
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG+S E Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEADRMI+
Sbjct: 487 AVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LSRCTYVVLDEADRMIDM 543
Query: 355 GHFRELQSIIDMLPMTNG--SNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN E + + + S + K RQT++F+AT+
Sbjct: 544 GFEPDVQKILEYIPVTNQKPDTEEAEDPEKMTMNFESGKHKYRQTVMFTATM 595
>gi|405360716|ref|ZP_11025657.1| ATP-dependent RNA helicase RhlE [Chondromyces apiculatus DSM 436]
gi|397090405|gb|EJJ21269.1| ATP-dependent RNA helicase RhlE [Myxococcus sp. (contaminant ex DSM
436)]
Length = 503
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 123/232 (53%), Gaps = 47/232 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL+L L++++ G+ PTPIQ+ IP A GKD++G A+TG+GKT AF LPI+Q
Sbjct: 3 FDELQLQETLLRAVKAEGYTTPTPIQQKAIPHAL-AGKDVLGVAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKEVAKGINVR 292
RL + K P G +R L++TPTRELA QV + K + +R
Sbjct: 62 RL-----------------SAKAPPGGARPVRCLVLTPTRELAGQVGESFATYGKNLPLR 104
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
I GG+ Q + L+ +++V TPGRL +LM E+ V L +L FVLDEADRM+
Sbjct: 105 HTVIFGGVGQNPQVQALQRGVDVLVATPGRLLDLM---EQGCVSLRSLEVFVLDEADRML 161
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+ G +++ +I LP KRQTL FSAT+
Sbjct: 162 DMGFIHDVRRVIKALP------------------------SKRQTLFFSATL 189
>gi|255942831|ref|XP_002562184.1| Pc18g03460 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586917|emb|CAP94570.1| Pc18g03460 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 790
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 155/270 (57%), Gaps = 24/270 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E L L++ + R+G+K+PT IQ+A IP A Q +D+IG A TGSGKT AF LP++
Sbjct: 358 SWEESSLPKRLLELVERVGYKDPTAIQRAAIPIA-MQSRDLIGVAVTGSGKTAAFLLPLL 416
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ A L+E E + P A+++ PTRELA Q+ K+ + + V
Sbjct: 417 VYI-----SALPRLDEN-EWRKNEGPY----AIVLAPTRELAQQIEIEAKKFTQPLGFNV 466
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI+
Sbjct: 467 VSIVGGHSLEEQAFSLRNGAEIIIATPGRLVDCI---ERRMLVLSQCCYVIMDEADRMID 523
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD--FR 411
G + I+D LP+TN + +E+ + + +S Q + RQT++++AT+ + + R
Sbjct: 524 LGFEEPVNKILDALPVTN--EKPDTEEAENSMAMS--QHQYRQTMMYTATMPAAVERIAR 579
Query: 412 KKLKHGSLKLKQSVNGLN-SIETLSERAGM 440
K L+ ++ ++ G+ +++T+ +R M
Sbjct: 580 KYLRRPAII---TIGGVGEAVDTVEQRVEM 606
>gi|121707307|ref|XP_001271794.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143359800|sp|A1CHL3.1|PRP28_ASPCL RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|119399942|gb|EAW10368.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 798
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 141/248 (56%), Gaps = 20/248 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E L L++ + R+G+KEPTPIQ+A IP A Q +D+IG A TGSGKT +F LP++
Sbjct: 367 SWEESGLPKRLLELVDRVGYKEPTPIQRAAIPIAL-QSRDLIGVAVTGSGKTASFLLPLL 425
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ E + +E E G A+++ PTRELA Q+ K+ + + V
Sbjct: 426 VYIAEL---------PRIDEFEWRKNDGPY-AIVLAPTRELAQQIEIEAKKFTQPLGFNV 475
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI+
Sbjct: 476 VSIVGGHSLEEQAYSLRNGAEIIIATPGRLVDCI---ERRILVLSQCCYIIMDEADRMID 532
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSADFR 411
G + I+D LP+TN + S++ + + S + RQT++++AT+ A+ R
Sbjct: 533 LGFEEPVNKILDALPVTN--EKPDSDEAENSAAMRS--HRYRQTMMYTATMPSAVERIAR 588
Query: 412 KKLKHGSL 419
K L+ ++
Sbjct: 589 KYLRRPAI 596
>gi|120599766|ref|YP_964340.1| DEAD/DEAH box helicase [Shewanella sp. W3-18-1]
gi|120559859|gb|ABM25786.1| DEAD/DEAH box helicase domain protein [Shewanella sp. W3-18-1]
Length = 433
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ P ++++I G+++ TPIQ+ IPA +G+D++ +A+TG+GKT AF LPI+Q
Sbjct: 3 FESFSFSPEILRAISDCGYQQMTPIQQQAIPAI-RRGQDVLASAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
KM+E+ E K + R LI+TPTRELA QV D++ K +N V+
Sbjct: 62 ----------KMVEKPSETL-----KSNTRVLILTPTRELAAQVADNVTAYCKYLNFSVL 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ E Q + LK +++V TPGRL E ++ V L + F VLDEADRM++
Sbjct: 107 TIYGGVKIETQAQKLKRGADVIVATPGRLLEHLTACN---VSLSNVDFLVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G ++Q I+ + KKRQ L+FSAT +
Sbjct: 164 GFSADIQKILQAV------------------------NKKRQNLLFSATFS 190
>gi|387792078|ref|YP_006257143.1| DNA/RNA helicase [Solitalea canadensis DSM 3403]
gi|379654911|gb|AFD07967.1| DNA/RNA helicase, superfamily II [Solitalea canadensis DSM 3403]
Length = 440
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 127/230 (55%), Gaps = 42/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NEL L ++K++ G+ +PTPIQ+ IP A +G+D++G A+TG+GKT AF +PI+Q
Sbjct: 3 FNELNLIDPILKALQSEGYTQPTPIQEQSIPVAL-KGQDLLGCAQTGTGKTAAFTIPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L + P +RALI+TPTRELA+Q+ + + K + ++ +
Sbjct: 62 -----------LLHPIVRHEQGTTP---IRALILTPTRELAIQIGESIAAYGKNLKLKHL 107
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG++ Q L +++V TPGRL +LM+ + + LH + FFVLDEADRM++
Sbjct: 108 VIFGGVNQLNQTVALSKGVDILVATPGRLLDLMN---QKFIHLHKVQFFVLDEADRMLDM 164
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ +I LP +KRQTL FSAT+
Sbjct: 165 GFVNDVKRVIAKLP------------------------EKRQTLFFSATM 190
>gi|294658755|ref|XP_461087.2| DEHA2F16720p [Debaryomyces hansenii CBS767]
gi|218512019|sp|Q6BL34.2|DBP10_DEBHA RecName: Full=ATP-dependent RNA helicase DBP10
gi|202953360|emb|CAG89469.2| DEHA2F16720p [Debaryomyces hansenii CBS767]
Length = 932
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 67/321 (20%)
Query: 107 DGDGDEDGNGVQKE--QEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVS 164
+ D + D VQ E +++ K KK+K +KGK +T S+ +S+ D+AE E
Sbjct: 23 ESDLNSDNEEVQDEIVSDEDDTKHKPNKKQKLEKGKSKQTFP-SLELSD--DEAENE--- 76
Query: 165 EAEISTEFDAWN------------ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGK 212
++++ F A N L+ +I + GFK+PTPIQ+ IP + +
Sbjct: 77 SKDMASYFVANNPQAKKAKNGSFPSFGFSKFLLTNISKKGFKQPTPIQRKTIPLIM-ENR 135
Query: 213 DIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTR 272
D++G A TGSGKT AF LP++++L + ++P+ +RA+I++P+R
Sbjct: 136 DVVGMARTGSGKTAAFTLPLVEKL------------------KSHSPRVGVRAIILSPSR 177
Query: 273 ELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEK 332
ELA Q +KE +KG ++R + ++GG S E+Q + P+++V TPGR L E
Sbjct: 178 ELASQTFKQVKEFSKGTDLRSIVLIGGDSLEEQFSSMMTNPDVIVATPGRFLHLKVEME- 236
Query: 333 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQR 392
+EL T+ + V DEADR+ E G +L +I LP +
Sbjct: 237 --LELKTVEYIVFDEADRLFEMGFAEQLNELIAALPSS---------------------- 272
Query: 393 KKRQTLVFSATIALS-ADFRK 412
RQ+L+FSAT+ S DF K
Sbjct: 273 --RQSLLFSATLPRSLIDFAK 291
>gi|121699888|ref|XP_001268209.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|134034061|sp|A1CTZ6.1|DBP10_ASPCL RecName: Full=ATP-dependent RNA helicase dbp10
gi|119396351|gb|EAW06783.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 935
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 148/313 (47%), Gaps = 59/313 (18%)
Query: 105 PGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDDAEEELVS 164
P + + D G + + N++ K K++ KKI + + DD +E ++
Sbjct: 8 PALSENEFDITGALFQNDSESDNERSSAKSKRQPKKKIPSQDLDFLGDVNDDDGDEAFIA 67
Query: 165 EAEISTEFDAWN-------------ELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQG 211
+ + S A N + L L+K+I R GF PTPIQ+ IP
Sbjct: 68 QQQTSANRKASNLKGRTVKKGGGFQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDD- 126
Query: 212 KDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPT 271
+D++G A TGSGKT AF +P++++L K G R LI++P+
Sbjct: 127 QDVVGMARTGSGKTAAFVIPMIEKLRSHSTKVGA------------------RGLILSPS 168
Query: 272 RELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGE 331
RELALQ +KE+ KG +++ V +VGG S E+Q ++ P++V+ TPGR L E
Sbjct: 169 RELALQTLKVVKELGKGTDLKCVLLVGGDSLEEQFTMMAGNPDIVIATPGRFLHLKV--E 226
Query: 332 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQ 391
+L +L+++ + V DEADR+ E G +L I+ LP
Sbjct: 227 MNL-DLYSIRYVVFDEADRLFEMGFAAQLTEILHGLP----------------------- 262
Query: 392 RKKRQTLVFSATI 404
RQTL+FSAT+
Sbjct: 263 -PNRQTLLFSATL 274
>gi|169773397|ref|XP_001821167.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Aspergillus
oryzae RIB40]
gi|91207407|sp|Q2UH00.1|PRP28_ASPOR RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|83769028|dbj|BAE59165.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391866029|gb|EIT75307.1| U5 snRNP-like RNA helicase subunit [Aspergillus oryzae 3.042]
Length = 803
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 144/251 (57%), Gaps = 21/251 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W+E L LM+ + ++G+KEPTPIQ+A IP A Q +D+IG A TGSGKT +F LP++
Sbjct: 368 SWDESGLPKRLMELVNKVGYKEPTPIQRAAIPIAM-QSRDLIGVAVTGSGKTASFLLPLL 426
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ E + +E E G A+++ PTRELA Q+ K+ + + V
Sbjct: 427 VYIAEL---------PRIDEFEWRKNDGPY-AIVLAPTRELAQQIEIEAKKFTEPLGFNV 476
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI+
Sbjct: 477 VSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCI---ERRMLVLSQCCYVIMDEADRMID 533
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS---LQRKKRQTLVFSATIALSAD- 409
G + I+D LP++N + SE+ + + +S + + RQT++++AT+ + +
Sbjct: 534 LGFEEPVNKILDALPVSN--EKPDSEEAENSMAMSQHIGTKDRYRQTMMYTATMPTAVER 591
Query: 410 -FRKKLKHGSL 419
RK L+ ++
Sbjct: 592 IARKYLRRPAI 602
>gi|380021885|ref|XP_003694787.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Apis florea]
Length = 788
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 143/232 (61%), Gaps = 16/232 (6%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E ++ I ++G+K+ TPIQ+ IP Q +DIIG AETGSGKTLAF +P++
Sbjct: 361 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGL-QNRDIIGVAETGSGKTLAFLIPLL 419
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 420 LWITS----LPKI--ERLEEADQ-GP----YSIILAPTRELAQQIEEETNKFGQPLGIRT 468
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 469 VVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMID 525
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 526 MGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 577
>gi|157960747|ref|YP_001500781.1| DEAD/DEAH box helicase [Shewanella pealeana ATCC 700345]
gi|157845747|gb|ABV86246.1| DEAD/DEAH box helicase domain protein [Shewanella pealeana ATCC
700345]
Length = 432
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 125/231 (54%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ P ++++I G+++ TPIQ+ IPA +G+D++ +A+TG+GKT AF LPI+Q
Sbjct: 3 FESFSFAPEILRAISECGYEKMTPIQQQAIPAV-RRGQDVLASAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++L+ G+ + RALI+TPTRELA Q+ D++ + AK ++++VV
Sbjct: 62 KMLDNPSTTGR---------------SNARALILTPTRELAAQIADNINDYAKYLDLKVV 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG+ + Q LK ++++ TPGRL E + + L + F VLDEADRM++
Sbjct: 107 TVYGGVKMDSQATKLKRGADIIIATPGRLLEHIIACN---LSLSNVDFLVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G ++Q I+ + KKRQ L+FSAT +
Sbjct: 164 GFSADIQKILQAV------------------------NKKRQNLLFSATFS 190
>gi|403238270|ref|ZP_10916856.1| DEAD/DEAH box helicase domain-containing protein [Bacillus sp.
10403023]
Length = 496
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 128/231 (55%), Gaps = 48/231 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
A+NEL + LMKSI ++GF+E TPIQ IP A +G D+IG A+TG+GKT AFG+P++
Sbjct: 3 AFNELGISQDLMKSISKMGFEEATPIQSQTIPLAL-EGHDVIGQAQTGTGKTAAFGIPLI 61
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ + + E +++ ++I PTRELA+QV++ L ++ VR+
Sbjct: 62 ENVDVKDE--------------------NIQGIVIAPTRELAIQVSEELHKIGHFNRVRI 101
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+PI GG +Q R LK P ++VGTPGR+ + ++ + ++L + VLDEAD M+
Sbjct: 102 LPIYGGQDISRQIRSLKKHPHIIVGTPGRVIDHIN---RKTLKLQNVKTVVLDEADEMLN 158
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P +RQTL+FSAT+
Sbjct: 159 MGFIEDIEAILKGVP------------------------DERQTLLFSATM 185
>gi|442755009|gb|JAA69664.1| Putative atp-dependent rna helicase [Ixodes ricinus]
Length = 291
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 109/185 (58%), Gaps = 24/185 (12%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L+L ++ + LG K+P+P+Q+ CIP+ +GKD IG A+TGSGKTLAF LPI+Q
Sbjct: 16 FEDLQLKKWIIDQLNSLGIKKPSPVQQNCIPSIL-KGKDCIGCAKTGSGKTLAFALPILQ 74
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L E+ P G + AL++TPTRELA Q+++ K + K + ++
Sbjct: 75 KLFED-------------------PYG-IFALVLTPTRELAFQISEQFKVIGKAVGLKDC 114
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGGM Q RLL P +VV TPGRL + + L + F VLDEADR++E
Sbjct: 115 VIVGGMDMVTQGRLLAESPHVVVSTPGRLADHLESCNT--FTLGRIKFLVLDEADRLLE- 171
Query: 355 GHFRE 359
GHF E
Sbjct: 172 GHFNE 176
>gi|167041390|gb|ABZ06143.1| putative DEAD/DEAH box helicase [uncultured marine microorganism
HF4000_005K23]
Length = 427
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 125/231 (54%), Gaps = 50/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL L+ L SI R+ FK PTPIQ IP A GKDI+G A+TG+GKTL +G+ +
Sbjct: 4 FSELNLNESLKHSIARMYFKIPTPIQAQAIPPAL-LGKDILGTAQTGTGKTLCYGIACIN 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKG-INVRV 293
+LL +R ALII PTRELA+QV D L + + +N++
Sbjct: 63 KLLNDRGS---------------------NALIICPTRELAVQVGDVLNGLIENTMNIKS 101
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
++GG S +KQ R L+ RP L++GTPGRL + + ++ ++LH F VLDE DRM++
Sbjct: 102 AVLIGGESMQKQLRQLQKRPRLIIGTPGRLNDHL---KRKSLKLHQSYFLVLDETDRMLD 158
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+ +P KK QTL+FSAT+
Sbjct: 159 MGFIPQVEQILKFVP------------------------KKHQTLLFSATL 185
>gi|160880140|ref|YP_001559108.1| DEAD/DEAH box helicase [Clostridium phytofermentans ISDg]
gi|160428806|gb|ABX42369.1| DEAD/DEAH box helicase domain protein [Clostridium phytofermentans
ISDg]
Length = 514
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 125/230 (54%), Gaps = 47/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NE+ L L+++I GF EP+PIQK IP +G+DI+G A+TG+GKT AF LPI+Q
Sbjct: 3 FNEMNLIKPLLQAIKEEGFIEPSPIQKKTIPLVL-EGRDILGCAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L KGE + +RALIITPTRELA+Q+ + + K +++
Sbjct: 62 SL------------SKGEGS-------GVRALIITPTRELAIQIYESFECFGKYTSLKQS 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ Q LKA ++++ TPGRL +L+ G + L + FVLDEAD+M++
Sbjct: 103 VIYGGVGQSLQVNSLKAGIDILIATPGRLNDLIGQG---YITLDAIEMFVLDEADQMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ +I +LP K RQTL+FSAT+
Sbjct: 160 GFLNDIKKVIKLLP------------------------KTRQTLLFSATM 185
>gi|206579391|ref|YP_002239559.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae 342]
gi|290510541|ref|ZP_06549911.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. 1_1_55]
gi|206568449|gb|ACI10225.1| putative ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae
342]
gi|289777257|gb|EFD85255.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. 1_1_55]
Length = 451
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 133/232 (57%), Gaps = 42/232 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L L+P +++++ G+ EPTPIQ+ IPA QG+D++ +A+TG+GKT F LP++
Sbjct: 2 SFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVM-QGRDLMASAQTGTGKTAGFTLPLL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
QRL+++ A KG +RALI+TPTRELA QV +++++ +K +N+R
Sbjct: 61 QRLIDKEPHA------KGRRP--------VRALILTPTRELAAQVGENVRDYSKYLNIRS 106
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ + GG+S Q L+ +++V TPGRL +L ++ V L ++ VLDEADRM++
Sbjct: 107 LVVFGGVSINPQMMKLRGGVDILVATPGRLLDLE---HQNAVSLDSVEILVLDEADRMLD 163
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +++ ++ LP +RQ L+FSAT +
Sbjct: 164 MGFIHDIRRVLAKLP------------------------ARRQNLLFSATFS 191
>gi|347524843|ref|YP_004831591.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 27782]
gi|345283802|gb|AEN77655.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 27782]
Length = 497
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 127/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NEL L L+K+I R GF+E TPIQ+A IP G D+IG A+TG+GKT AFGLPI+Q
Sbjct: 3 FNELGLEEDLLKAIKRSGFEEATPIQEATIPLVL-AGIDVIGQAQTGTGKTAAFGLPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + E H++A++I+PTRELA+Q + L + K +V
Sbjct: 62 HVDVKEE--------------------HIQAIVISPTRELAIQTQEELYRLGKDKRAKVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q +LLK P+++VGTPGRL + ++ + V+L + VLDEAD M++
Sbjct: 102 VVYGGADIRRQIKLLKHVPQILVGTPGRLLDHIN---RKTVDLSHVKTLVLDEADEMLDM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++II +P ++RQTL+FSAT+
Sbjct: 159 GFLEDIEAIIKNVP------------------------EERQTLLFSATM 184
>gi|70996226|ref|XP_752868.1| ATP-dependent RNA helicase (Drs1) [Aspergillus fumigatus Af293]
gi|74672247|sp|Q4WRV2.1|DRS1_ASPFU RecName: Full=ATP-dependent RNA helicase drs1
gi|66850503|gb|EAL90830.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
Af293]
gi|159131623|gb|EDP56736.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
A1163]
Length = 830
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 123/242 (50%), Gaps = 44/242 (18%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
+ST ++ + L +++ + + F PTPIQ+ IP A GKDI+G+A TGSGKT A
Sbjct: 305 VSTFNRSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVAL-LGKDIVGSAVTGSGKTAA 363
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +PI++RLL K P R I+ PTRELA+Q + ++A
Sbjct: 364 FVVPILERLLFRPRKV---------------PTS--RVAILMPTRELAVQCYNVATKLAT 406
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
++ +VGG S +QE +LK RP++++ TPGR + M V+ TL VLDE
Sbjct: 407 HTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVD--TLEILVLDE 464
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS 407
ADRM+E+G EL I+ +P K RQT++FSAT+ S
Sbjct: 465 ADRMLEDGFADELNEILTTIP------------------------KSRQTMLFSATMTDS 500
Query: 408 AD 409
D
Sbjct: 501 VD 502
>gi|393240212|gb|EJD47739.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 778
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 123/237 (51%), Gaps = 42/237 (17%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPI 232
D++ + L ++K++ L F PTPIQ + IP A GKDI+G A TGSGKT AF +P+
Sbjct: 173 DSFLSMNLSRPILKALTALNFHTPTPIQASTIPVAL-LGKDIVGNAVTGSGKTAAFVIPM 231
Query: 233 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 292
++RLL +K + A R +I+ PTRELA+Q D ++A +VR
Sbjct: 232 LERLL---------YRDKSKNA------AATRCVILVPTRELAVQCFDVATKLAAHTDVR 276
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
IVGG+S + QE L+ RP++V+ TPGRL + + + L + VLDEADRM+
Sbjct: 277 FCLIVGGLSVKAQEASLRLRPDVVIATPGRLIDHLRNAPQ--FGLDAVDILVLDEADRML 334
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+G EL I+ P + RQT++FSAT+ S D
Sbjct: 335 SDGFADELAEIVQACP------------------------RGRQTMLFSATMTDSVD 367
>gi|46124501|ref|XP_386804.1| hypothetical protein FG06628.1 [Gibberella zeae PH-1]
gi|91206590|sp|Q4I830.1|DRS1_GIBZE RecName: Full=ATP-dependent RNA helicase DRS1
Length = 796
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 122/238 (51%), Gaps = 48/238 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ + L +M+ + +GF +PTPIQ IP A GKD++G AETGSGKT AF LPI+
Sbjct: 257 SFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIAL-MGKDVVGGAETGSGKTGAFILPIL 315
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINV 291
+RLL Y PK R +++ PTRELA+Q ++A ++
Sbjct: 316 ERLL-------------------YRPKKIPTTRVVVLLPTRELAIQCHAVATKLAAFTDI 356
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ VGG+S + QE LK RP++++ TPGR + M V+ T+ VLDEADRM
Sbjct: 357 KFTLAVGGLSLKAQELELKLRPDVIIATPGRFIDHMRNSASFSVD--TVEILVLDEADRM 414
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+E+G EL I+ LP K RQT++FSAT+ S D
Sbjct: 415 LEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSSVD 448
>gi|190702284|gb|ACE75181.1| ATP-dependent RNA helicase [Glyptapanteles flavicoxis]
Length = 796
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 143/232 (61%), Gaps = 16/232 (6%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E ++ I ++G+K+ TPIQ+ IP Q +DIIG AETGSGKTLAF +P++
Sbjct: 369 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGL-QNRDIIGVAETGSGKTLAFLIPLL 427
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 428 LWITS----LPKI--ERLEEADQ-GPY----SIILAPTRELAQQIEEETNKFGQPLGIRT 476
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 477 VVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMID 533
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 534 MGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 585
>gi|403224137|dbj|BAM42267.1| DEAD-box family helicase [Theileria orientalis strain Shintoku]
Length = 776
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 16/230 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L L++SI + G+ +PTPIQ IP A +D+IG A TGSGKT AF LP++
Sbjct: 331 WAESPLPWELLESIKKAGYTKPTPIQMQAIPIALEM-RDLIGIAVTGSGKTAAFVLPMLT 389
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ KML +E P AL++ P+RELALQ+ D + + R V
Sbjct: 390 YV--------KMLPPLDDETSMDGP----YALVMAPSRELALQIYDETNKFSTYCTCRSV 437
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG S E Q L+ E+++GTPGR+ + + ++ L ++ VLDEADRMI+
Sbjct: 438 AVVGGRSAEAQAFELRKGCEIIIGTPGRIKDCL---DRAYTVLSQCNYVVLDEADRMIDM 494
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G + I+D +P TN ++ +S+ + ++ + R+ R T +FSAT+
Sbjct: 495 GFEDVVNEILDCIPTTNLKDDDESKALEQELSTKAGHRRYRITQMFSATM 544
>gi|388854481|emb|CCF51868.1| related to DRS1-RNA helicase of the DEAD box family [Ustilago
hordei]
Length = 935
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 149/310 (48%), Gaps = 53/310 (17%)
Query: 98 SSANEEDPGDGDGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIKTVEESVTVSNGPDD 157
SS N + +G+ E N + QE N ++ +++K KK E T +
Sbjct: 259 SSENGQSESEGEDQEQANA-EDVQESNSSQDDSDEETEQEKAKKAAFFAEEPTTT----- 312
Query: 158 AEEELVSEAEISTEFDA---WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDI 214
+S+++ S DA + +L L++++ L F +PTPIQ IP A GKDI
Sbjct: 313 -----ISKSKSSATTDADSSFTSFQLSRPLLRALTTLSFHKPTPIQSRTIPIAL-AGKDI 366
Query: 215 IGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTREL 274
+ A TGSGKT AF +P ++RL R K+ L+ K R LI+ PTREL
Sbjct: 367 VAGAVTGSGKTAAFMIPTIERLTW-RAKSRTPLQAKS------------RVLILAPTREL 413
Query: 275 ALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHL 334
A+Q K +AK ++R VGG+S + QE LK RPE+V+ TPGRL + +
Sbjct: 414 AIQCYSVGKNIAKFTDIRFCLCVGGLSVKSQEAELKLRPEVVIATPGRLIDHVRNSASFT 473
Query: 335 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK 394
L + V+DEADRM+++G EL I+ P +
Sbjct: 474 --LDDIEILVMDEADRMLQDGFADELNEIVKSCP-----------------------KGA 508
Query: 395 RQTLVFSATI 404
RQT++FSAT+
Sbjct: 509 RQTMLFSATM 518
>gi|427710423|ref|YP_007052800.1| DEAD/DEAH box helicase [Nostoc sp. PCC 7107]
gi|427362928|gb|AFY45650.1| DEAD/DEAH box helicase domain protein [Nostoc sp. PCC 7107]
Length = 476
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 132/232 (56%), Gaps = 39/232 (16%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L L +++++ LG+ +PTPIQ IPA G+D++ A+TG+GKT +F LP++
Sbjct: 42 SFSHLGLSNEIIRAVTELGYTKPTPIQMQAIPAVL-SGRDLLAGAQTGTGKTASFTLPLL 100
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q+L E+ K E + +RALI+TPTRELA QV +++E +K + +
Sbjct: 101 QKLSSEKSL-------KSTSYECFP----IRALILTPTRELAAQVELNVREYSKYLKLNT 149
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ + GG+S Q++LL+ R +++V TPGRL + + ++ V L + F VLDEADRM++
Sbjct: 150 MAMFGGVSINPQKKLLRGRVDILVATPGRLLDHV---QQRTVNLSNVEFLVLDEADRMLD 206
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G R+++ I+ +LP K+RQ L+F AT +
Sbjct: 207 MGFIRDIRRILSLLP------------------------KQRQNLLFFATFS 234
>gi|449663558|ref|XP_002166443.2| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Hydra
magnipapillata]
Length = 632
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 129/231 (55%), Gaps = 16/231 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W + L ++ I LG+ +PTPIQ+ IP +DIIG AETGSGKT AF +P++
Sbjct: 206 WRDSSLPNDILDVILSLGYTDPTPIQRQAIPIGL-MNRDIIGIAETGSGKTAAFVIPLLV 264
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ E + + + G A+I+ PTRELA Q+ + + AK + +R V
Sbjct: 265 WITGLPESDRQSVSDNGP-----------FAIILAPTRELAQQIEEETIKFAKKLGIRTV 313
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG+S E Q L+ E+V+ TPGRL +++ E + L S+ V+DEADRMI+
Sbjct: 314 AVIGGLSREDQGFQLRLGCEIVIATPGRLIDVL---ENRYLVLSQCSYVVMDEADRMIDM 370
Query: 355 GHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ LP+TN + ++E S + K RQT++F+AT+
Sbjct: 371 GFEPDVQKILEHLPVTNIKPDTEEAEDVNVIAKNYSSKDKYRQTVMFTATM 421
>gi|408388319|gb|EKJ68005.1| hypothetical protein FPSE_11816 [Fusarium pseudograminearum CS3096]
Length = 721
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 130/238 (54%), Gaps = 17/238 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W E L L+ + +G+K+P+PIQ+A IP A Q +D+IG A TGSGKT A
Sbjct: 283 IPNPMRSWQESNLPQRLLNIVDDVGYKDPSPIQRAAIPIAL-QARDLIGVAVTGSGKTAA 341
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F LP++ + + L+E + YA LI+ PTREL Q+ ++ A
Sbjct: 342 FLLPLLVYISDL-----PPLDEINKHDGPYA-------LIMAPTRELVQQIETEARKFAG 389
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ RVV IVGG E+Q L+ E+VV TPGRL + + E+ L+ L + ++DE
Sbjct: 390 PLGFRVVSIVGGHQIEEQAYNLRDGAEIVVATPGRLLDCI---ERRLLVLSQCCYVIMDE 446
Query: 348 ADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G + I+D LP+TN + ++E Q + + RQT++++AT+
Sbjct: 447 ADRMIDLGFEESVNKILDALPVTNEKPDTDEAENAQIMQRYLGGRDRYRQTMMYTATM 504
>gi|86134655|ref|ZP_01053237.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
gi|85821518|gb|EAQ42665.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
Length = 438
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 129/247 (52%), Gaps = 47/247 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ L L +K++ G+ +P+PIQ+ IP +GKD++ +A+TG+GKT F LP++
Sbjct: 2 SFKSLGLSDAFVKAVEEKGYTKPSPIQEKAIPHIL-EGKDVLASAQTGTGKTAGFTLPVL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q L E + KY P +RAL++TPTRELA QV D+++E +K +N++
Sbjct: 61 QYLSETKH-------------PKYRP---IRALVLTPTRELAAQVHDNVREYSKYVNIKS 104
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG+ Q LK +++V TPGRL +L ++ V + F+LDEADRM++
Sbjct: 105 AVVFGGVKAASQIATLKRGVDILVATPGRLLDLH---DQKAVSFKRIDVFILDEADRMLD 161
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKK 413
G R++ II +P KRQ L+FSAT + KK
Sbjct: 162 MGFVRDINKIISYMPA------------------------KRQNLMFSATFSKEI---KK 194
Query: 414 LKHGSLK 420
L G LK
Sbjct: 195 LASGILK 201
>gi|365759503|gb|EHN01286.1| Drs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 737
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 125/234 (53%), Gaps = 45/234 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
+D +N L L ++K + LG+ P+PIQ A IP A GKDII A TGSGKT AF +P
Sbjct: 215 YDNFNSLSLSRPVLKGLANLGYVMPSPIQSATIPIAL-LGKDIIAGAVTGSGKTAAFMIP 273
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-N 290
I++RLL K A R +++ PTRELALQV D K++A+ + +
Sbjct: 274 IIERLL-----------------YKPAKIASTRVIVLLPTRELALQVADVGKQIARFVPS 316
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+ VGG++ +QE++LK+RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 317 ITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADR 374
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
M+E G EL I+ +LP + RQ L+FSAT+
Sbjct: 375 MLEEGFQDELNEIMGLLPSS------------------------RQNLLFSATM 404
>gi|355683260|gb|AER97066.1| DEAD box polypeptide 24 [Mustela putorius furo]
Length = 702
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 110/210 (52%), Gaps = 21/210 (10%)
Query: 256 KYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPEL 315
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMS +KQ+R+L +PE+
Sbjct: 241 KAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSAQKQQRMLNRQPEI 300
Query: 316 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNE 375
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 301 VVATPGRLWELIKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 352
Query: 376 GQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLS 435
S KRQTL+FSAT+ L ++ H K ++ L
Sbjct: 353 -----------SDSQYNPKRQTLIFSATLTLVHQAPARILHKKHIKKIDKTA--KLDLLV 399
Query: 436 ERAGMRANVAIVDLTNVSVLANKLEESFIE 465
++ GMR ++DLT L E+ I
Sbjct: 400 QKIGMRGKPKVIDLTRNEATVETLTETKIH 429
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 171 EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGL 230
+ AW +L + +++++ LGF PTPIQ + A DI+GAAETGSGKTLAF +
Sbjct: 54 DVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 113
Query: 231 PIMQRLLEEREK 242
P++ +L+ + K
Sbjct: 114 PMIHAVLQWQMK 125
>gi|288936404|ref|YP_003440463.1| DEAD/DEAH box helicase [Klebsiella variicola At-22]
gi|288891113|gb|ADC59431.1| DEAD/DEAH box helicase domain protein [Klebsiella variicola At-22]
Length = 451
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 133/232 (57%), Gaps = 42/232 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L L+P +++++ G+ EPTPIQ+ IPA QG+D++ +A+TG+GKT F LP++
Sbjct: 2 SFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVM-QGRDLMASAQTGTGKTAGFTLPLL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
QRL+++ A KG +RALI+TPTRELA QV +++++ +K +N+R
Sbjct: 61 QRLIDKEPHA------KGRRP--------VRALILTPTRELAAQVGENVRDYSKYLNIRS 106
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ + GG+S Q L+ +++V TPGRL +L ++ V L ++ VLDEADRM++
Sbjct: 107 LVVFGGVSINPQMMKLRGGVDILVATPGRLLDLE---HQNAVSLDSVEILVLDEADRMLD 163
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +++ ++ LP +RQ L+FSAT +
Sbjct: 164 MGFIHDIRRVLAKLP------------------------ARRQNLLFSATFS 191
>gi|294932199|ref|XP_002780153.1| ATP-dependent RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239890075|gb|EER11948.1| ATP-dependent RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 702
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 130/241 (53%), Gaps = 52/241 (21%)
Query: 191 LGFKEPTPIQKACIPAAAHQ-GKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEE 249
LGF PT IQ+ IP A GKDI+ AAETGSGKTLA+G+P++ +L E + + ++
Sbjct: 149 LGFTIPTQIQRQSIPPALLPIGKDILAAAETGSGKTLAYGIPLLTNIL-YMESSSSLKDD 207
Query: 250 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-NVRVVPIVGGMSTEKQERL 308
+ + + + L A+++ PTRELA+QV HL +V I ++ + PIVGGMS +KQ RL
Sbjct: 208 NDDNSNR---RRRLDAIVVVPTRELAMQVYTHLIKVGHYIPHLLIAPIVGGMSIQKQHRL 264
Query: 309 LKARPELVVGTPGRLWELMSGG-----------------------EKHLVELHTLSFFVL 345
+ P ++V TPGRL L+ +K + +L T+ VL
Sbjct: 265 MHKVPNIIVATPGRLAALLGCATIKVSGDVLDRADTEIQASDELRKKLIPQLRTI---VL 321
Query: 346 DEADRMI-ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
DEADR++ + GHF++L ++D++ T N K Q LVFSAT+
Sbjct: 322 DEADRLVADEGHFKDLTRVLDIIYTTTQVN-------------------KIQHLVFSATL 362
Query: 405 A 405
A
Sbjct: 363 A 363
>gi|356555223|ref|XP_003545934.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine
max]
Length = 591
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 137/285 (48%), Gaps = 47/285 (16%)
Query: 156 DDAEEELVSEAEISTEFDA--WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKD 213
+D +E + A+ T+ DA + +L L +K+ LG + P +Q+ CIP +G+
Sbjct: 50 EDHPDETATVADTDTDADAETFGDLGLAEWAVKTCRELGMRRPRGVQRRCIPRVL-EGRH 108
Query: 214 IIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRE 273
++G ETGSGKT AF LPI+ RL E P G + AL++TPTRE
Sbjct: 109 VLGVDETGSGKTAAFALPILHRLAEH-------------------PFG-VFALVVTPTRE 148
Query: 274 LALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKH 333
LA Q+ + + + +++R+ +VGGM +Q + L ARP LV+ TPGR+ L+
Sbjct: 149 LAFQLAEQFRALGSAVHLRITVVVGGMDMLRQAKELAARPHLVIATPGRIHALLRNNPDI 208
Query: 334 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRK 393
F VLDEADR+++ G EL+ I LP +
Sbjct: 209 PPVFSRTKFLVLDEADRVLDVGFQEELRFIFQCLP------------------------E 244
Query: 394 KRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERA 438
RQ L FSAT + + + + ++ G ++ETL ++A
Sbjct: 245 NRQNLFFSATTTSNLQKLRGRYQDKMYVYEAYEGFKTVETLKQQA 289
>gi|333895980|ref|YP_004469854.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111245|gb|AEF16182.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 513
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 130/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L+ ++K+I +GF+EP+ IQ IP +G D+IG AETG+GKTLA+G PI+
Sbjct: 3 FKELHLNEKILKAIDDMGFEEPSKIQSEVIPVLL-EGLDVIGQAETGTGKTLAYGAPIIN 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ G + L++TPTRELA+QV D L + K VR++
Sbjct: 62 NF--------------------SSNDGKVFCLVLTPTRELAIQVNDELARIGKYSKVRLL 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG+ ++Q + +K ++VVGTPGR+ +L+ ++++++L ++ + V+DEAD M++
Sbjct: 102 PVYGGVQIDRQIKAIKRGVDIVVGTPGRVLDLI---KRNVLDLKSVRYLVIDEADEMMDM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II N +N K+RQT++FSAT+
Sbjct: 159 GFIDDIKEII------NHTN------------------KERQTMMFSATM 184
>gi|282599579|ref|ZP_05971084.2| ATP-dependent RNA helicase RhlE [Providencia rustigianii DSM 4541]
gi|282568585|gb|EFB74120.1| ATP-dependent RNA helicase RhlE [Providencia rustigianii DSM 4541]
Length = 457
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 129/232 (55%), Gaps = 42/232 (18%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++++L L+ ++++I LG+ PTPIQ+ IPA G D++ +A+TG+GKT F LPI+
Sbjct: 10 SFSDLALNEEILRAINELGYDSPTPIQQQAIPAVL-AGNDLLASAQTGTGKTAGFTLPIL 68
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q+L++ + +RALI+TPTRELA QV +++KE ++ +N+R
Sbjct: 69 QKLVDAPRSGNN--------------RRPIRALILTPTRELAAQVAENVKEYSRHLNIRS 114
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG+S Q L++ ++++ TPGRL +L ++ V+L + VLDEADRM++
Sbjct: 115 FVVFGGVSINPQMMKLRSGVDVLIATPGRLLDLE---HQNAVDLSQVEILVLDEADRMLD 171
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +++ +I LP KKRQ L+FSAT +
Sbjct: 172 MGFIHDIRRVITKLP------------------------KKRQNLLFSATFS 199
>gi|428172478|gb|EKX41387.1| hypothetical protein GUITHDRAFT_96054 [Guillardia theta CCMP2712]
Length = 654
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 139/250 (55%), Gaps = 27/250 (10%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L P ++++I +K P+PIQ CIP +D++G A+TGSGKT AF LP++
Sbjct: 224 WEESGLPPEILEAIKEKKYKIPSPIQMQCIPLGL-LNRDVVGIAQTGSGKTAAFVLPML- 281
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ ++ + AP+G L ALI+ PTRELA Q+ D K +N+R
Sbjct: 282 ----------VYISKQPPITQDTAPEGPL-ALILAPTRELANQIYDEAITFCKFMNIRCF 330
Query: 295 PIVGG---MSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
P+VGG S E+Q ++ E++V TPGRL + + E+ LV L+ ++ VLDEADRM
Sbjct: 331 PLVGGGGVKSIEEQGFTVRQGVEILVATPGRLIDCL---ERRLVVLNQCNYVVLDEADRM 387
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI--ALSAD 409
I+ G ++Q+I+D +P +N E + + + + + RQT +FSAT+ A+
Sbjct: 388 IDMGFEPQVQAILDAMPSSNLKPEDDAAEE------GNQEFRYRQTFMFSATMPPAIERI 441
Query: 410 FRKKLKHGSL 419
RK L+ +
Sbjct: 442 TRKYLRRPAF 451
>gi|343493741|ref|ZP_08732041.1| ATP-dependent RNA helicase RhlE [Vibrio nigripulchritudo ATCC
27043]
gi|342825883|gb|EGU60344.1| ATP-dependent RNA helicase RhlE [Vibrio nigripulchritudo ATCC
27043]
Length = 485
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 128/238 (53%), Gaps = 46/238 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L L P L+++I LG++ P+PIQ IP QG+D++ AA+TG+GKT F LP++
Sbjct: 2 SFSSLGLSPELLRAIEELGYETPSPIQAQAIPPVI-QGRDVMAAAQTGTGKTAGFTLPLL 60
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
QRL AG K A H+RAL++TPTRELA QV + + K +NV
Sbjct: 61 QRL------AGG----------KSAKSNHVRALVLTPTRELAAQVNGSVVKYGKYLNVNS 104
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GG+ Q L+ +++V TPGRL +L +++ V+ L VLDEADRM++
Sbjct: 105 NVVFGGVKINPQMMKLRKGSDVLVATPGRLLDLY---QQNAVKFSQLEVLVLDEADRMLD 161
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSADFR 411
G R+++ I+ +LP +KRQ L+FSAT S D R
Sbjct: 162 MGFIRDIKKILALLP------------------------EKRQNLLFSAT--FSDDIR 193
>gi|302853426|ref|XP_002958228.1| hypothetical protein VOLCADRAFT_77867 [Volvox carteri f.
nagariensis]
gi|300256416|gb|EFJ40682.1| hypothetical protein VOLCADRAFT_77867 [Volvox carteri f.
nagariensis]
Length = 574
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 127/232 (54%), Gaps = 27/232 (11%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L LL+K+I R+G+K+P+PIQ A IP Q +D+IG AETGSGKT AF LP++
Sbjct: 157 WEESGLPSLLIKAIDRVGYKKPSPIQMAAIPLGLQQ-RDVIGIAETGSGKTAAFVLPMLS 215
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ + EE E P A+++ PTRELA Q+ + ++A N R+
Sbjct: 216 YIMRQPPMT--------EENEADGPY----AVVLAPTRELAQQIEEETHKLAYYTNYRIA 263
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG S E+Q L+ E+V+ TPGRL + + ++H L+ ++ VLDEADRMI+
Sbjct: 264 SVVGGQSIEEQGAKLRKGCEIVIATPGRLLDCI---DRHYAVLNQCNYVVLDEADRMIDL 320
Query: 355 GHFRELQSIIDMLP--MTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++ ++D +P +G V R R T +FSAT+
Sbjct: 321 GFEPQVIGVLDAMPSSFLKPDEDG---------AVLEANRTYRTTYMFSATM 363
>gi|81429227|ref|YP_396228.1| ATP-dependent RNA helicase [Lactobacillus sakei subsp. sakei 23K]
gi|78610870|emb|CAI55922.1| Putative ATP-dependent RNA helicase [Lactobacillus sakei subsp.
sakei 23K]
Length = 530
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 124/230 (53%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL L +MK+I R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLPI+Q
Sbjct: 3 FSELGLSEPIMKAISRAGFEEATPIQGETIPLAL-AGKDVIGQAQTGTGKTAAFGLPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L + ++ALII+PTRELA+Q + L + + +V
Sbjct: 62 NLDLDNP--------------------DIQALIISPTRELAIQTQEELYRLGRDRKAKVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK P+++VGTPGRL + ++ + V+L + VLDEAD M++
Sbjct: 102 VVYGGADIRRQIRSLKDHPQILVGTPGRLLDHIN---RRTVKLDHVKTLVLDEADEMLDM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++SII +P +KRQTL+FSAT+
Sbjct: 159 GFVDDIESIIKQVP------------------------EKRQTLLFSATL 184
>gi|156095474|ref|XP_001613772.1| pre-mRNA splicing factor RNA helicase PRP28 [Plasmodium vivax
Sal-1]
gi|148802646|gb|EDL44045.1| pre-mRNA splicing factor RNA helicase PRP28, putative [Plasmodium
vivax]
Length = 1006
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 125/230 (54%), Gaps = 16/230 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L L+K+I + +++PTPIQ IP A +D+IG AETGSGKT AF LP++
Sbjct: 583 WEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEM-RDLIGIAETGSGKTAAFVLPMLA 641
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K L E + P ALII P+RELA+Q+ D + A + R V
Sbjct: 642 YV--------KQLPPLTYETSQDGP----YALIIAPSRELAIQIFDETNKFASYCSCRTV 689
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG + E Q L+ E+++GTPGR+ + + EK L+ ++ +LDEADRM++
Sbjct: 690 AVVGGRNAEAQAFELRKGVEIIIGTPGRIHDCL---EKAYTVLNQCNYVILDEADRMMDM 746
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G + I+D +P TN +E + Q + + R R T +FSAT+
Sbjct: 747 GFEDSVHFILDKIPTTNLKSEDDALALQEEMMAKAGHRLYRLTQMFSATM 796
>gi|197100123|ref|NP_001125347.1| probable ATP-dependent RNA helicase DDX23 [Pongo abelii]
gi|67460452|sp|Q5RC67.1|DDX23_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=DEAD box protein 23
gi|55727779|emb|CAH90640.1| hypothetical protein [Pongo abelii]
Length = 820
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 141/240 (58%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ ++LV ++ VLDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN--RYLVP-SRCTYVVLDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|401840824|gb|EJT43489.1| DRS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 758
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 125/234 (53%), Gaps = 45/234 (19%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
+D +N L L ++K + LG+ P+PIQ A IP A GKDII A TGSGKT AF +P
Sbjct: 236 YDNFNSLSLSRPVLKGLANLGYVTPSPIQSATIPIAL-LGKDIIAGAVTGSGKTAAFMIP 294
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-N 290
I++RLL K A R +++ PTRELALQV D K++A+ + +
Sbjct: 295 IIERLL-----------------YKPAKIASTRVIVLLPTRELALQVADVGKQIARFVPS 337
Query: 291 VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 350
+ VGG++ +QE++LK+RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 338 ITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADR 395
Query: 351 MIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
M+E G EL I+ +LP + RQ L+FSAT+
Sbjct: 396 MLEEGFQDELNEIMGLLPSS------------------------RQNLLFSATM 425
>gi|336373626|gb|EGO01964.1| hypothetical protein SERLA73DRAFT_49383 [Serpula lacrymans var.
lacrymans S7.3]
Length = 474
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 124/238 (52%), Gaps = 50/238 (21%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++++L + L+ ++ R+ + PT IQ ACIP G+D IG A+TGSGKT+AF LPI+
Sbjct: 42 SFDDLNISSPLLAALSRMSIRTPTEIQVACIPPLL-SGRDCIGNAKTGSGKTIAFALPIL 100
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
Q+L E+ P G + AL++TPTRELA Q++D + G+++R
Sbjct: 101 QKLSED-------------------PYG-IFALVLTPTRELAFQISDQFAVLGAGLSIRT 140
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELM--SGGEKHLVELHTLSFFVLDEADRM 351
IVGGM Q L RP +VV TPGR+ + + S GE L + F VLDEADR+
Sbjct: 141 AVIVGGMDMMTQALELDNRPHVVVATPGRIVDHLRSSSGEW---SLSRIKFLVLDEADRL 197
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+ EL + D+LP K+RQT +F+AT+ S D
Sbjct: 198 LTPTFSPELSYLFDVLP------------------------KERQTCLFTATLTPSID 231
>gi|259488879|tpe|CBF88686.1| TPA: ATP-dependent RNA helicase (Drs1), putative (AFU_orthologue;
AFUA_1G14990) [Aspergillus nidulans FGSC A4]
Length = 814
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 127/251 (50%), Gaps = 44/251 (17%)
Query: 159 EEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAA 218
EE+ +A ++ ++ E L +++ + + F PTPIQ+ IP A GKDI+G+A
Sbjct: 284 EEKTDEDAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVAL-LGKDIVGSA 342
Query: 219 ETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQV 278
TGSGKT AF +PI++RLL K P R I+ PTRELA+Q
Sbjct: 343 VTGSGKTAAFVVPILERLLFRPRKV---------------PTS--RVAILMPTRELAVQC 385
Query: 279 TDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELH 338
+ ++A ++ +VGG S +QE +LK RP++++ TPGR + M V+
Sbjct: 386 YNVATKLATYTDITFCQLVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSASFTVD-- 443
Query: 339 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTL 398
TL VLDEADRM+E+G EL I+ +P K RQT+
Sbjct: 444 TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSRQTM 479
Query: 399 VFSATIALSAD 409
+FSAT+ S D
Sbjct: 480 LFSATMTDSVD 490
>gi|156846782|ref|XP_001646277.1| hypothetical protein Kpol_1032p11 [Vanderwaltozyma polyspora DSM
70294]
gi|160380605|sp|A7TGW7.1|DBP10_VANPO RecName: Full=ATP-dependent RNA helicase DBP10
gi|156116952|gb|EDO18419.1| hypothetical protein Kpol_1032p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 977
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 123/234 (52%), Gaps = 53/234 (22%)
Query: 183 LLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREK 242
L++ ++++ GF++PTPIQ+ IP Q +DI+G A TGSGKT AF LP++++L K
Sbjct: 131 LILSNVHKKGFRQPTPIQRKTIPLIL-QKRDIVGMARTGSGKTAAFVLPMIEKLKSHSSK 189
Query: 243 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMST 302
G RA+I++P+RELALQ KE +KG ++R V + GG S
Sbjct: 190 IGA------------------RAVILSPSRELALQTHRVFKEFSKGTHLRSVLLTGGDSL 231
Query: 303 EKQERLLKARPELVVGTPGRLWEL---MSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 359
E Q ++ + P+++V TPGR L MS ++L T+ + V DEADR+ E G +
Sbjct: 232 EDQFSMMMSNPDVIVATPGRFLHLKVEMS------LDLKTVEYVVFDEADRLFEMGFQEQ 285
Query: 360 LQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS-ADFRK 412
L ++ LPM RQTL+FSAT+ S DF K
Sbjct: 286 LNELLAALPMN------------------------RQTLLFSATLPSSLVDFAK 315
>gi|329956784|ref|ZP_08297353.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
gi|328523823|gb|EGF50910.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
Length = 372
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 128/230 (55%), Gaps = 45/230 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L + ++K+I G+ PTPIQ IPAA GKDI+G A+TG+GKT AF +PI+Q
Sbjct: 3 FKDLNITEPILKAIEEKGYTSPTPIQVKAIPAAL-TGKDILGCAQTGTGKTAAFAIPIIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L + G+E +K ++ALI+TPTRELALQ+++ + + AK VR
Sbjct: 62 HL------------QAGKERDK-----SIKALILTPTRELALQISECIDDYAKYTQVRHG 104
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG++ Q +L +++V TPGRL +LM+ G + L ++ FVLDEADRM++
Sbjct: 105 VIFGGVNQRAQVNMLHKGVDILVATPGRLLDLMNQG---YIRLDSVRHFVLDEADRMLDM 161
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ ++ LP K++QTL FSAT+
Sbjct: 162 GFIHDIKRLLPKLP------------------------KEKQTLFFSATM 187
>gi|300779365|ref|ZP_07089223.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC 35910]
gi|300504875|gb|EFK36015.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC 35910]
Length = 434
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 123/230 (53%), Gaps = 45/230 (19%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L + K+I G+ PTPIQ+ IP G+D +G A+TG+GKT AF +PI+Q
Sbjct: 3 FTDLNLIEPIAKAIQEQGYTTPTPIQERSIPDIL-DGRDFLGCAQTGTGKTAAFSIPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L + + P H++ALI+TPTRELA+Q+ +++ K + ++ +
Sbjct: 62 NLSKNK-----------------IPNKHIKALILTPTRELAIQIEENINAYGKYLPLKQL 104
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ QE LK +++V TPGRL + ++ G ++ L L FVLDEADRM++
Sbjct: 105 VIFGGVKQGNQEAALKKGVDILVATPGRLLDFIAQG---IISLKNLEIFVLDEADRMLDM 161
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ +I +LP ++RQTL FSAT+
Sbjct: 162 GFVHDVKRVIKLLP------------------------QRRQTLFFSATM 187
>gi|378725910|gb|EHY52369.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28 [Exophiala
dermatitidis NIH/UT8656]
Length = 835
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 141/257 (54%), Gaps = 20/257 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W E L L++ + ++G+K+P+PIQ+A IP A Q +D+IG A TGSGKT A
Sbjct: 385 IPNPMRSWQESGLPRRLLQIVEQVGYKDPSPIQRAAIPIAL-QNRDLIGVAVTGSGKTAA 443
Query: 228 FGLPIMQRLLE-EREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVA 286
F LP++ + E R +M G A+I+ PTRELA Q+ K+ A
Sbjct: 444 FLLPLLVYISELPRLDEDEMRRNNGP-----------YAIILAPTRELAQQIEIEAKKFA 492
Query: 287 KGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 346
+ VV IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++D
Sbjct: 493 TPLGFTVVSIVGGHSIEEQAYNLRNGAEIIIATPGRLVDCI---ERRIIVLEQCCYVIMD 549
Query: 347 EADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVT--VSSLQRKKRQTLVFSATI 404
EADRMI+ G + I+D LP++N + ++ + ++ + + RQT++++AT+
Sbjct: 550 EADRMIDMGFEEPVNKILDALPVSNEKPDSEAAEDSRAMSSHIGGRDIRYRQTMMYTATM 609
Query: 405 --ALSADFRKKLKHGSL 419
A+ RK L+ ++
Sbjct: 610 PPAVERIARKYLRRPAI 626
>gi|356528665|ref|XP_003532920.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine
max]
Length = 587
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 45/289 (15%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
T SNG + + + A ++ + +A+ +L L +K+ LG + P P+Q+ CIP
Sbjct: 39 TTSNGERREDHSVETAATVAADAEAFGDLGLAEWAVKTCRELGMRRPRPVQRRCIPRVL- 97
Query: 210 QGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIIT 269
+G+ ++G ETGSGKT AF LPI+ RL E P G + AL++T
Sbjct: 98 EGRHVLGIDETGSGKTAAFALPILHRLAEH-------------------PFG-VFALVVT 137
Query: 270 PTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 329
PTRELA Q+ + + + +++R+ +VGGM +Q + L ARP LV+ TPGR+ L+
Sbjct: 138 PTRELAFQLAEQFRALGSAVHLRITVVVGGMDMLRQTKELAARPHLVIATPGRIHALLRN 197
Query: 330 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS 389
F VLDEADR+++ G EL+ I LP
Sbjct: 198 NPDIPPVFSRTKFLVLDEADRVLDVGFQEELRFIFQCLP--------------------- 236
Query: 390 LQRKKRQTLVFSATIALSADFRKKLKHGSLKLKQSVNGLNSIETLSERA 438
+ RQ L FSAT + ++ + + ++ G ++ETL ++A
Sbjct: 237 ---ENRQNLFFSATTTSNLQKLRERYQDKMYVYEAYEGFKTVETLKQQA 282
>gi|237748776|ref|ZP_04579256.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
gi|229380138|gb|EEO30229.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
Length = 465
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 132/241 (54%), Gaps = 42/241 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ L LHPL+ K++ + + +PTP+Q+ IPA +GKD++ +++TGSGKT AF LP +
Sbjct: 3 FEALGLHPLIQKALADIHYDKPTPVQEKAIPAGI-EGKDLLVSSQTGSGKTAAFMLPALH 61
Query: 235 RL----LEEREKAGKMLEEKGEEAE------KYAPKGHLRALIITPTRELALQVTDHLKE 284
R E+ +K K +K + A +Y P H + L++TPTRELA+Q+ ++
Sbjct: 62 RFASVPFEKSDK--KTFNQKRQAARAKGEKVRYEP-AHPKMLVLTPTRELAMQIVQSSED 118
Query: 285 VAKGI-NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFF 343
+ + + R V I+GGM KQ +LL PE++V TPGRL + M G+ + L
Sbjct: 119 YSAYLKHFRTVAILGGMPYPKQMQLLAKNPEILVATPGRLIDHMHSGK---IRFDQLEIL 175
Query: 344 VLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSAT 403
VLDEADRM++ G ++++II P T RQT++FSAT
Sbjct: 176 VLDEADRMLDMGFIDDIETIIAATPET------------------------RQTMLFSAT 211
Query: 404 I 404
+
Sbjct: 212 L 212
>gi|162146723|ref|YP_001601182.1| cold-shock DEAD box protein A [Gluconacetobacter diazotrophicus PAl
5]
gi|161785298|emb|CAP54844.1| putative cold-shock DEAD box protein A [Gluconacetobacter
diazotrophicus PAl 5]
Length = 596
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 145/281 (51%), Gaps = 59/281 (20%)
Query: 181 HPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEER 240
HP + +++ G++EPTP+QKA + AA G+D++ +A+TGSGKT+AFGL + LL
Sbjct: 7 HPAIRRALDARGYEEPTPVQKAVLDVAA-DGRDLLVSAQTGSGKTVAFGLAMADTLLGG- 64
Query: 241 EKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGM 300
AE++ P G A+II PTRELA+QV L + R+V +GGM
Sbjct: 65 -------------AERFGPAGAPLAVIIAPTRELAMQVQRELSWLYAPAGARIVSCIGGM 111
Query: 301 STEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 360
++ R L+ +VVGTPGRL + S G L EL + VLDEAD M++ G EL
Sbjct: 112 DARREARALEIGAHIVVGTPGRLCDHQSRGRLVLSELRVV---VLDEADEMLDLGFRDEL 168
Query: 361 QSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALS-ADFRKKLKHGSL 419
Q ++D +P T R+TL+FSATIA A ++ + +L
Sbjct: 169 QQLLDAMPDT------------------------RRTLLFSATIAKDIATLARRYQRDAL 204
Query: 420 KLKQSVNGLNSIETLSERAGMRANVAIVDLTNVSVLANKLE 460
+ I+TLS G R + D+T +V+A+ E
Sbjct: 205 R----------IDTLS---GARQH---ADITYRAVMADPRE 229
>gi|281209095|gb|EFA83270.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1070
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 129/266 (48%), Gaps = 55/266 (20%)
Query: 150 TVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAH 209
+VS G ++ ++E + + + + LH L K+I R GFK PTPIQ+ IP
Sbjct: 234 SVSFGGEEDDDESGKKKKKKISGGGFQSMELHKTLFKAIVRKGFKVPTPIQRKTIPLIL- 292
Query: 210 QGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIIT 269
G D++ A TGSGKT AF +P++Q+L E K G RA+I++
Sbjct: 293 AGSDVVAMARTGSGKTAAFVVPMIQKLGEHSIKVGA------------------RAIILS 334
Query: 270 PTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSG 329
PTRELA+Q +K+ G N+R +VGG S E Q L P+++V TPGRL
Sbjct: 335 PTRELAIQTYKVVKDFTYGSNLRSCLVVGGDSMEDQFAELARNPDIIVATPGRLVH---- 390
Query: 330 GEKHLVE----LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCV 385
HL E L T+ + V DEADR+ E G ++L I+ L
Sbjct: 391 ---HLQEVGMGLSTVQYIVFDEADRLFEMGFQQQLNDIVSKLS----------------- 430
Query: 386 TVSSLQRKKRQTLVFSATI-ALSADF 410
RQTL+FSAT+ ++ DF
Sbjct: 431 -------DNRQTLLFSATLPSMLVDF 449
>gi|442320812|ref|YP_007360833.1| putative ATP-dependent RNA helicase RhlE [Myxococcus stipitatus DSM
14675]
gi|441488454|gb|AGC45149.1| putative ATP-dependent RNA helicase RhlE [Myxococcus stipitatus DSM
14675]
Length = 497
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 120/230 (52%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL+LH L++++ G+ PTPIQ IP A GKD++G A+TG+GKT AF LPI+Q
Sbjct: 3 FDELQLHDTLLRAVKAEGYTTPTPIQAKAIPHAL-AGKDVLGVAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL + G +R L++TPTRELA QV + K + +R
Sbjct: 62 RLSAKAPAGGAR---------------PVRCLVLTPTRELAGQVGESFMTYGKNLPLRHA 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ Q + L+ +++V TPGRL +LM G V L +L FVLDEADRM++
Sbjct: 107 VIFGGVGQGAQVQSLQRGVDVLVATPGRLLDLMDQG---YVSLRSLEVFVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ +I LP KRQTL FSAT+
Sbjct: 164 GFIHDVRKVIKALP------------------------SKRQTLFFSATM 189
>gi|423553834|ref|ZP_17530161.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus ISP3191]
gi|401182654|gb|EJQ89786.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus ISP3191]
Length = 528
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 124/230 (53%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L L++S+ +GF+E TPIQ IP A QGKDIIG A+TG+GKT AFGLP++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +E ++ ++I PTRELA+QV + L ++ K VR++
Sbjct: 63 KVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRIL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK P ++VGTPGR+ + ++ + + L + VLDEAD M+
Sbjct: 103 PIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P T+ QTL+FSAT+
Sbjct: 160 GFIEDIEAILTDVPETH------------------------QTLLFSATM 185
>gi|307201507|gb|EFN81270.1| Probable ATP-dependent RNA helicase DDX23 [Harpegnathos saltator]
Length = 679
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 143/232 (61%), Gaps = 16/232 (6%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E ++ I ++G+K+ TPIQ+ IP Q +DIIG AETGSGKTLAF +P++
Sbjct: 252 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGL-QNRDIIGVAETGSGKTLAFLIPLL 310
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 311 LWITS----LPKI--ERLEEADQ-GP----YSIILAPTRELAQQIEEETNKFGQPLGIRT 359
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 360 VVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMID 416
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 417 MGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 468
>gi|417974638|ref|ZP_12615445.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 25644]
gi|346328982|gb|EGX97294.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 25644]
Length = 497
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+NEL L L+K+I R GF+E TPIQ+A IP G D+IG A+TG+GKT AFGLPI+Q
Sbjct: 3 FNELGLEEDLLKAIKRSGFEEATPIQEATIPLVL-AGIDVIGQAQTGTGKTAAFGLPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + E H++A++++PTRELA+Q + L + K +V
Sbjct: 62 HVDVKEE--------------------HIQAIVVSPTRELAIQTQEELYRLGKDKRAKVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q +LLK P+++VGTPGRL + ++ + V+L + VLDEAD M++
Sbjct: 102 VVYGGADIRRQIKLLKHVPQILVGTPGRLLDHIN---RKTVDLSHVKTLVLDEADEMLDM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++II +P ++RQTL+FSAT+
Sbjct: 159 GFLEDIEAIIKNVP------------------------EERQTLLFSATM 184
>gi|367007110|ref|XP_003688285.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
gi|357526593|emb|CCE65851.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
Length = 755
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 123/233 (52%), Gaps = 49/233 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+N L L ++K + LG+ +P+PIQ A IP GKDII A TGSGKT AF +PI++
Sbjct: 222 FNTLSLSRPVLKGLSDLGYTKPSPIQSATIPIGLL-GKDIIAGAVTGSGKTAAFMIPIIE 280
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKEVAKGINVR 292
RLL Y P R +++TPTRELA+QV+D K + K +N
Sbjct: 281 RLL-------------------YKPANIASTRVIVLTPTRELAIQVSDVGKRIGKYVNGL 321
Query: 293 VVPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ VGG++ +QE+ LK RP++V+ TPGR + + V+ ++ V+DEADRM
Sbjct: 322 TFGLAVGGLNLRQQEQELKTRPDVVIATPGRFIDHIRNSASFNVD--SVEVLVIDEADRM 379
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+E+G EL I+ +LP KRQTL+FSAT+
Sbjct: 380 LEDGFQEELNEIMSLLPT------------------------KRQTLLFSATM 408
>gi|269798436|ref|YP_003312336.1| DEAD/DEAH box helicase [Veillonella parvula DSM 2008]
gi|416998583|ref|ZP_11939344.1| DEAD-box ATP-dependent RNA helicase CshA [Veillonella parvula
ACS-068-V-Sch12]
gi|269095065|gb|ACZ25056.1| DEAD/DEAH box helicase domain protein [Veillonella parvula DSM
2008]
gi|333977481|gb|EGL78339.1| DEAD-box ATP-dependent RNA helicase CshA [Veillonella parvula
ACS-068-V-Sch12]
Length = 515
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 124/230 (53%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L + +++++ +GF+EPTPIQ+ IP A GKD+IG A+TG+GKT AFGLP+++
Sbjct: 5 FEQLMISEPVLRALNDMGFEEPTPIQQEAIPVAM-SGKDMIGQAQTGTGKTAAFGLPVLE 63
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
R+ G E H++ +I++PTRELA+QV + L ++A+ N+ +
Sbjct: 64 RV-------------DGNER-------HVQVVILSPTRELAIQVAEELNKMAQYTNITAL 103
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK P+++V TPGRL + M G H + + VLDEAD M+
Sbjct: 104 PIYGGQDINRQFRALKKNPQIIVATPGRLMDHMDRGSIHFDHVKVV---VLDEADEMLNM 160
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++ I+ +P + QTL+FSAT+
Sbjct: 161 GFVDDINKILGAIP------------------------EDHQTLLFSATM 186
>gi|288818118|ref|YP_003432466.1| ATP-dependent RNA helicase [Hydrogenobacter thermophilus TK-6]
gi|384128882|ref|YP_005511495.1| DEAD/DEAH box helicase [Hydrogenobacter thermophilus TK-6]
gi|288787518|dbj|BAI69265.1| ATP-dependent RNA helicase [Hydrogenobacter thermophilus TK-6]
gi|308751719|gb|ADO45202.1| DEAD/DEAH box helicase domain protein [Hydrogenobacter thermophilus
TK-6]
Length = 365
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 124/231 (53%), Gaps = 50/231 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+N +L +L K+I LG++EPTPIQK IP A +G DI+G A TG+GKT AFG+PI+
Sbjct: 3 FNFQQLSEILQKAIRDLGYEEPTPIQKEAIPLAL-KGYDIMGQAATGTGKTAAFGIPIV- 60
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
EK + L+AL++TPTRELALQV + L ++K ++V
Sbjct: 61 --------------------EKISKDDGLKALVLTPTRELALQVKEQLYALSKYKALKVF 100
Query: 295 PIVGGMSTEKQERLL-KARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
GG + LL K P +V+GTPGR+ +L+S G ++ L +SF VLDEAD M++
Sbjct: 101 VFYGGTPVRRDLELLSKVVPNIVIGTPGRIKDLLSRG---VLNLGGVSFLVLDEADLMLD 157
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++SII P K RQT +FSATI
Sbjct: 158 MGFVEDIESIIAYTP------------------------KDRQTFLFSATI 184
>gi|354548342|emb|CCE45078.1| hypothetical protein CPAR2_700820 [Candida parapsilosis]
Length = 559
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 55/266 (20%)
Query: 147 ESVTVSNGPDDAEEELVSEAEISTE---------FDAWNELRLHPLLMKSIYRLGFKEPT 197
+S ++N P + +E +S E++ E A++++ L P + + + F +PT
Sbjct: 111 QSSKLTNTPQSSIDEFLSTNEVTIEDSQHLNYRPILAFDQISLDPTIASKLTK--FAKPT 168
Query: 198 PIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKY 257
PIQ P GKD+IG AETGSGKT AFG+P + ++ E E G
Sbjct: 169 PIQSISWPFLL-DGKDVIGVAETGSGKTFAFGVPAINNIITSGE------ENPG------ 215
Query: 258 APKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVV 317
L L I+PTRELALQ+ D+L+E+ K ++ V I GG+S + Q ++ ++V
Sbjct: 216 -----LSVLCISPTRELALQIYDNLQELTKNTSISCVAIYGGVSKDDQINKIRQGANVIV 270
Query: 318 GTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQ 377
TPGRL +L++ G V+L ++++ VLDEADRM+E G +++ II TN N
Sbjct: 271 ATPGRLVDLINDGA---VDLSSINYLVLDEADRMLEKGFEEDIKHIIG---STNAHN--- 321
Query: 378 SEQTQTCVTVSSLQRKKRQTLVFSAT 403
RQTL+F+AT
Sbjct: 322 -----------------RQTLMFTAT 330
>gi|327403899|ref|YP_004344737.1| DEAD/DEAH box helicase domain-containing protein [Fluviicola
taffensis DSM 16823]
gi|327319407|gb|AEA43899.1| DEAD/DEAH box helicase domain protein [Fluviicola taffensis DSM
16823]
Length = 375
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 123/231 (53%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
++EL L P L+ ++ L + PTPIQ+ IP+ QGKD+ G A+TG+GKT AF LPI+Q
Sbjct: 3 FDELNLLPHLLDALKELEYTTPTPIQEQSIPSLL-QGKDLFGCAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L + + GK +R L++ PTRELA Q+ D K K +R +
Sbjct: 62 HLDPDGQVKGKR---------------PIRCLVLAPTRELANQINDSFKSYGKHSKLRSM 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG++ KQ L A +++V TPGRL +LM+ G ++L ++ FVLDEADRM++
Sbjct: 107 VIFGGVNQNKQVNQLNAGIDILVATPGRLLDLMNQGH---IQLSKITHFVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +++ I+ LP K +Q + FSATI+
Sbjct: 164 GFIHDIKKILPRLP------------------------KNKQNIFFSATIS 190
>gi|291225666|ref|XP_002732826.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23-like
[Saccoglossus kowalevskii]
Length = 768
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E L ++ I +G+KEPTPIQ+ IP Q +D+IG AETGSGKT AF +P++
Sbjct: 340 SWTEAGLPDYIIDVIDSMGYKEPTPIQRQAIPIGL-QNRDVIGVAETGSGKTAAFLIPLL 398
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ K+ ++ + YA +I+ PTRELA Q+ K + +R
Sbjct: 399 VWI----SSLPKIARQEDVDQGPYA-------VILAPTRELAQQIEAETINFGKPLGIRT 447
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V I+GG+S E Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 448 VSIIGGISREDQGFKLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYVVLDEADRMID 504
Query: 354 NGHFRELQSIIDMLPMTNGS-NEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ LP++N + +E + + + K RQT++F+AT+
Sbjct: 505 MGFEPDVQHILEYLPVSNQKPDTDDAEDHDKLLANFASKHKYRQTVMFTATM 556
>gi|409099575|ref|ZP_11219599.1| DEAD/DEAH box helicase [Pedobacter agri PB92]
Length = 433
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 129/230 (56%), Gaps = 42/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L ++K++ + G+ +PTPIQ+ IP +GKD++G A+TG+GKT AF +P++Q
Sbjct: 3 FKELNLIEPILKALEKEGYTQPTPIQEQSIPTIL-KGKDLLGCAQTGTGKTAAFAIPMLQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
L E K + K + +++AL++TPTRELA+Q+ + K +N+R +
Sbjct: 62 LLHE------KHINTKATK--------NIKALVLTPTRELAIQIEESFKAYGSNLNLRHL 107
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG++ Q L+ +++V TPGRL +LM+ G + L+T+ FVLDEADRM++
Sbjct: 108 VIFGGVNQHSQVEALRKGVDILVATPGRLLDLMNQG---FITLNTIELFVLDEADRMLDM 164
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ ++ LP KRQTL FSAT+
Sbjct: 165 GFIHDVKRVVAKLP------------------------AKRQTLFFSATM 190
>gi|374604838|ref|ZP_09677788.1| DEAD/DEAH box helicase [Paenibacillus dendritiformis C454]
gi|374389546|gb|EHQ60918.1| DEAD/DEAH box helicase [Paenibacillus dendritiformis C454]
Length = 517
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 137/254 (53%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ E L P L+++I LGF+E TPIQ+ IP A G+D+IG A+TG+GKT AFG+P++
Sbjct: 4 FVEFGLEPKLLQAITELGFEEATPIQEKAIPVAM-TGRDLIGQAQTGTGKTAAFGIPLIS 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ E+ + AL++TPTRELA+QV + + ++ + VR +
Sbjct: 63 KIDPSEER--------------------VVALVMTPTRELAIQVAEEIGKLTRFKGVRSL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK P++++GTPGRL + ++ + + L + VLDEAD M++
Sbjct: 103 PIYGGQDIGRQIRALKKHPQIIIGTPGRLLDHIN---RKTIRLDHVQTVVLDEADEMLDM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G ++ SI+ ++P ++RQT++FSAT+ L+
Sbjct: 160 GFMEDITSILSLVP------------------------EERQTMLFSATMPPNIQKLANQ 195
Query: 410 FRKKLKHGSLKLKQ 423
F + +H S+ KQ
Sbjct: 196 FLRDPEHVSVMPKQ 209
>gi|400596455|gb|EJP64229.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 895
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 153/324 (47%), Gaps = 75/324 (23%)
Query: 86 PGKKTNTKKRKRSSANEEDPGDG--DGDEDGNGVQKEQEKNLKNQKGKKKKKKKKGKKIK 143
PG TN K+ ++A+ + DG +G + GN E LK +K KG+ +K
Sbjct: 23 PGDDTNGKQNGAATADTDFDFDGLMNGHDQGNEDDDEAFIALKQAASFRKTSNLKGRTVK 82
Query: 144 TVEESVTVSNGPDDAEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
+ + + ++ L+K+I R GF PTPIQ+
Sbjct: 83 ---------------------------KGGGFQAMGINATLLKAIARKGFSVPTPIQRKT 115
Query: 204 IPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL 263
IP + KD++G A TGSGKT AF +P+++RL K G
Sbjct: 116 IPLVLDR-KDVVGMARTGSGKTAAFVIPMIERLRAHSAKFGS------------------ 156
Query: 264 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 323
RALI++P+RELA+Q +KE++KG +++ V +VGG S E+Q + A P++V+ TPGR
Sbjct: 157 RALIMSPSRELAIQTLKVVKELSKGTDLKAVLLVGGDSLEEQFGFMAANPDIVIATPGRF 216
Query: 324 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQT 383
L + +++ ++ + V DEADR+ E G +L I+ LP++
Sbjct: 217 LHLKV---EMKLDISSIKYVVFDEADRLFEMGFAAQLTEILHALPLS------------- 260
Query: 384 CVTVSSLQRKKRQTLVFSATIALS 407
RQTL+FSAT+ S
Sbjct: 261 -----------RQTLLFSATLPTS 273
>gi|212533429|ref|XP_002146871.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces marneffei
ATCC 18224]
gi|210072235|gb|EEA26324.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces marneffei
ATCC 18224]
Length = 826
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 118/226 (52%), Gaps = 44/226 (19%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKA 243
+++ + +GF +PTPIQ+ IP A GKD++G A TGSGKT AF +PI++RLL + K
Sbjct: 315 ILRGLAAVGFTKPTPIQRKAIPVALL-GKDVVGGAVTGSGKTGAFIIPILERLLYRQRKV 373
Query: 244 GKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTE 303
P R I+ PTRELA+Q + ++A ++ ++GG S
Sbjct: 374 ---------------PTS--RVAILMPTRELAVQCFNVATKLATYTDITFCQLIGGFSLR 416
Query: 304 KQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 363
+QE +LK RP++++ TPGR + M V+ TL VLDEADRM+E+G EL I
Sbjct: 417 EQENILKKRPDIIIATPGRFIDHMRNSSSFTVD--TLEILVLDEADRMLEDGFADELNEI 474
Query: 364 IDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+ +P K RQT++FSAT+ S D
Sbjct: 475 LTTIP------------------------KSRQTMLFSATMTDSVD 496
>gi|374384807|ref|ZP_09642324.1| hypothetical protein HMPREF9449_00710 [Odoribacter laneus YIT
12061]
gi|373227611|gb|EHP49924.1| hypothetical protein HMPREF9449_00710 [Odoribacter laneus YIT
12061]
Length = 397
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 133/254 (52%), Gaps = 45/254 (17%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL + L+K+I G+ PTPIQ IP A GKDI+G A+TG+GKT AF +PI+Q
Sbjct: 3 FKELNIADSLLKAISEKGYHCPTPIQIQGIPVAL-SGKDILGIAQTGTGKTAAFAIPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAP----------KGHLRALIITPTRELALQVTDHLKE 284
L + A + + +E + ++ K ++ALI+TPTRELALQ+ D +
Sbjct: 62 HL--SQNNASFSVSQDTQEKKSFSRQENNPGKKYRKREIQALILTPTRELALQIGDSFTD 119
Query: 285 VAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFV 344
K +R I GG+ Q L+ +++V TPGRL +LM+ G V+L +L FV
Sbjct: 120 YGKYTGLRHCVIFGGIKQLVQTTALRRGVDILVATPGRLLDLMNQG---FVDLSSLKHFV 176
Query: 345 LDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
LDEADRM++ G +++ I+ LP + QTL+FSAT+
Sbjct: 177 LDEADRMLDMGFINDIKRILLKLP------------------------AQHQTLLFSATM 212
Query: 405 -----ALSADFRKK 413
ALSA KK
Sbjct: 213 PQSIAALSASILKK 226
>gi|68473179|ref|XP_719395.1| hypothetical protein CaO19.7635 [Candida albicans SC5314]
gi|74656492|sp|Q5ACK7.1|DRS1_CANAL RecName: Full=ATP-dependent RNA helicase DRS1
gi|46441210|gb|EAL00509.1| hypothetical protein CaO19.7635 [Candida albicans SC5314]
gi|238880416|gb|EEQ44054.1| hypothetical protein CAWG_02313 [Candida albicans WO-1]
Length = 613
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 125/232 (53%), Gaps = 46/232 (19%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ L+L ++K I L F +PTPIQ A IP A GKDI+ A+TGSGKT A+ +PI+
Sbjct: 131 SFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIAL-LGKDIVAGAQTGSGKTGAYMIPII 189
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI-NVR 292
+RLL Y P + +I+TPTRELALQV + K+++ + N+
Sbjct: 190 ERLL-------------------YKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLN 230
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
+ VGG++ +QE LK RP++V+ TPGRL + + V+ + V+DEADRM+
Sbjct: 231 IGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQ--DIQVLVIDEADRML 288
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
E G EL I+ ++P + KRQTL+FSAT+
Sbjct: 289 EEGFQDELTEILSLIP-----------------------KHKRQTLLFSATM 317
>gi|156844737|ref|XP_001645430.1| hypothetical protein Kpol_534p53 [Vanderwaltozyma polyspora DSM
70294]
gi|160380651|sp|A7TJM9.1|DRS1_VANPO RecName: Full=ATP-dependent RNA helicase DRS1
gi|156116092|gb|EDO17572.1| hypothetical protein Kpol_534p53 [Vanderwaltozyma polyspora DSM
70294]
Length = 752
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 46/248 (18%)
Query: 158 AEEELVSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGA 217
A E SEA ST +N L L ++K + LG+ +P+PIQ A IP GKDII
Sbjct: 217 APESESSEA-TSTVHSTFNSLTLSRPVLKGLSDLGYTKPSPIQSATIPIGL-SGKDIIAG 274
Query: 218 AETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQ 277
A TGSGKT AF +PI++RLL K A R +++TPTRELA+Q
Sbjct: 275 AVTGSGKTAAFMIPIIERLL-----------------YKPAKVASTRVIVLTPTRELAIQ 317
Query: 278 VTDHLKEVAKGINVRVVPI-VGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVE 336
+ D K++ K ++ + VGG++ +QE+ LK RP++V+ TPGR + + V+
Sbjct: 318 IADVGKKIGKYVSGLTFGLAVGGLNLRQQEQELKTRPDIVIATPGRFIDHVRNSSSFNVD 377
Query: 337 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQ 396
++ V+DEADRM+E G EL I+ +LP KRQ
Sbjct: 378 --SVEVLVMDEADRMLEEGFQEELNEILTLLP------------------------SKRQ 411
Query: 397 TLVFSATI 404
TL+FSAT+
Sbjct: 412 TLLFSATM 419
>gi|384919775|ref|ZP_10019812.1| DEAD/DEAH box helicase-like protein [Citreicella sp. 357]
gi|384466377|gb|EIE50885.1| DEAD/DEAH box helicase-like protein [Citreicella sp. 357]
Length = 436
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 126/233 (54%), Gaps = 44/233 (18%)
Query: 172 FDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLP 231
FD ++ L L P L + + + GFKEPTPIQ IP A +G D++G A+TG+GKTLAFGLP
Sbjct: 2 FD-FDMLGLAPSLTEVLQKNGFKEPTPIQNQAIPLAL-EGHDVLGLAQTGTGKTLAFGLP 59
Query: 232 IMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINV 291
++ LL+E G+ A K A +AL++ PTREL Q+ D L+++ G +
Sbjct: 60 LIDGLLKE----------PGKPAPKCA-----KALVLAPTRELVNQIADSLRQLTDGSKL 104
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
RV +VGG S +Q L +++V TPGRL +LM G V+L T+ VLDEAD+M
Sbjct: 105 RVATVVGGQSINRQISFLSRGTDILVATPGRLIDLMDRGA---VDLSTVRQLVLDEADQM 161
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
++ G L+ I L RQT++FSAT+
Sbjct: 162 LDLGFIHALRRIAPKL------------------------GTPRQTMLFSATM 190
>gi|365122316|ref|ZP_09339220.1| hypothetical protein HMPREF1033_02566 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642816|gb|EHL82156.1| hypothetical protein HMPREF1033_02566 [Tannerella sp.
6_1_58FAA_CT1]
Length = 421
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 127/230 (55%), Gaps = 43/230 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ L+L +++++ G+ PTPIQ IP GKD++G A+TG+GKT AF +PI+Q
Sbjct: 3 FENLKLTEPVLRALQDEGYITPTPIQAKAIPCVL-DGKDLLGCAQTGTGKTAAFSIPIIQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
LL E G+ +RALI+TPTRELA Q+ D++ ++ ++
Sbjct: 62 NLLAEAGGNGRR---------------SVRALILTPTRELAAQIGDNINAYSRHTRLKHT 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+S + Q L+ +++V TPGRL +L+S + +++L T+ FFVLDEADRM++
Sbjct: 107 VIFGGVSQKSQVEALRKGVDILVATPGRLLDLVS---QKIIDLQTIRFFVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+ +LP +KRQ+L FSAT+
Sbjct: 164 GFIHDIKKILLLLP------------------------RKRQSLFFSATM 189
>gi|226295334|gb|EEH50754.1| ATP-dependent RNA helicase drs1 [Paracoccidioides brasiliensis
Pb18]
Length = 755
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 48/238 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ L +++ + +GF PTPIQ+ IP A GKD++G A TGSGKT AF +PI+
Sbjct: 300 SFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALL-GKDVVGGAVTGSGKTGAFIIPIL 358
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINV 291
+RLL Y P+ R I+ PTRELA+Q + ++A ++
Sbjct: 359 ERLL-------------------YRPRKVPTSRVAILMPTRELAVQCCNVATKLATYTDI 399
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+VGG S +QE +LK RP++++ TPGR + M V+ TL VLDEADRM
Sbjct: 400 TFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILVLDEADRM 457
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+E+G EL I+ +P K RQT++FSAT+ + D
Sbjct: 458 LEDGFADELNEILTTIP------------------------KSRQTMLFSATMTNTID 491
>gi|350424960|ref|XP_003493968.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Bombus
impatiens]
Length = 784
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 143/232 (61%), Gaps = 16/232 (6%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E ++ I ++G+K+ TPIQ+ IP Q +DIIG AETGSGKTLAF +P++
Sbjct: 357 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGL-QNRDIIGVAETGSGKTLAFLIPLL 415
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 416 LWITS----LPKI--ERLEEADQ-GPY----SIILAPTRELAQQIEEETNKFGQPLGIRT 464
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 465 VVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMID 521
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 522 MGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 573
>gi|442771472|gb|AGC72158.1| ATP-dependent RNA helicase RhlE [uncultured bacterium A1Q1_fos_560]
Length = 449
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 130/232 (56%), Gaps = 35/232 (15%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ EL L L + + GF PTPIQ A IP A +G+D++ A+TGSGKTLAF +P++
Sbjct: 3 SFAELSLTSFLADRLRQAGFTAPTPIQGAAIPLAL-EGRDLLAQAKTGSGKTLAFLIPLI 61
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+R ++E K G A + RAL++ PTRELALQ+ L++ A +V
Sbjct: 62 ERAVKENWKPA------GHGAAQAGSSRSPRALVLAPTRELALQIEMELRKYAPP-SVTS 114
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ + GG+ E+ R L+ P +V+GTPGRL ++ G +HL +L + + V+DEAD+M++
Sbjct: 115 LAVYGGVPIERHYRALRQPPLIVIGTPGRLLDV--AGTRHL-DLRGIEYVVMDEADQMLD 171
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G R++Q I+ +LP +RQT++FSAT +
Sbjct: 172 RGFLRDIQRILQLLP------------------------AQRQTMLFSATFS 199
>gi|374583452|ref|ZP_09656546.1| DNA/RNA helicase, superfamily II [Desulfosporosinus youngiae DSM
17734]
gi|374419534|gb|EHQ91969.1| DNA/RNA helicase, superfamily II [Desulfosporosinus youngiae DSM
17734]
Length = 495
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 137/251 (54%), Gaps = 53/251 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L L +M+SI +GF+E TP+Q+ IP A +G+D+IG A+TG+GKT A+G+P+++
Sbjct: 4 FTDLNLSESVMRSIINMGFEETTPVQEQTIPIAM-EGRDLIGQAQTGTGKTAAYGIPLVE 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
RL+ + E H++ +++ PTRELA+QV + L ++ + + +
Sbjct: 63 RLVGQAE--------------------HIQGIVLAPTRELAVQVAEELNKIGQFKRIHAL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG + Q R LK RP ++V TPGRL + M + + L+ + VLDEAD M+
Sbjct: 103 PIYGGQGIDWQIRALKKRPHIIVATPGRLMDHM---RRKTIRLNDIKIVVLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI-----ALSAD 409
G ++++I+ +P ++RQTL+FSAT+ A++
Sbjct: 160 GFLDDIETILKEVP------------------------EERQTLLFSATMPRQIQAIAQR 195
Query: 410 FRKKLKHGSLK 420
F K+ + S+K
Sbjct: 196 FMKEPQLISIK 206
>gi|238878470|gb|EEQ42108.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 581
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 131/232 (56%), Gaps = 23/232 (9%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
WNE ++ L+ I +LG++EPT +Q+A IP A + +D++G AETGSGKTLAF +P++
Sbjct: 170 WNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKK-RDVVGVAETGSGKTLAFLIPVLN 228
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L E K + E P G LI+ PTRELALQ+T ++ K + +V+
Sbjct: 229 YILSIDENYLKYEKISNE------PVG----LILAPTRELALQITKEAEKFCKKLGYQVL 278
Query: 295 PIVGGMSTEKQ-ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
PI+GG + ++ + L+V TPGR L+ E+ +V+L V+DEADRMI+
Sbjct: 279 PIIGGHHYQDTINKIDQTGVHLIVATPGR---LVDSIERKIVDLSKCYCLVMDEADRMID 335
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G ++L ++D LP +Q + + +KR T++F+ATI+
Sbjct: 336 MGFEKDLNKVLDKLPT--------EKQLSSTIDGRIFHLEKRSTMMFTATIS 379
>gi|117921427|ref|YP_870619.1| DEAD/DEAH box helicase [Shewanella sp. ANA-3]
gi|117613759|gb|ABK49213.1| DEAD/DEAH box helicase domain protein [Shewanella sp. ANA-3]
Length = 433
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 125/231 (54%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ P ++++I G+++ TPIQ+ IPA +G+D++ +A+TG+GKT AF LPI+Q
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAI-RRGQDVLASAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
KM+E E K + R LI+TPTRELA QV D+++ +K +N V+
Sbjct: 62 ----------KMVENPSETL-----KSNARVLILTPTRELAAQVADNVEAYSKYLNFSVL 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ E Q + LK +++V TPGRL E ++ + L ++ F VLDEADRM++
Sbjct: 107 TIYGGVKVETQAQKLKRGADIIVATPGRLLEHLTACN---LSLSSIDFLVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G ++Q I+ + KKRQ L+FSAT +
Sbjct: 164 GFNADIQKILQAV------------------------NKKRQNLLFSATFS 190
>gi|340724474|ref|XP_003400607.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Bombus
terrestris]
Length = 784
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 143/232 (61%), Gaps = 16/232 (6%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E ++ I ++G+K+ TPIQ+ IP Q +DIIG AETGSGKTLAF +P++
Sbjct: 357 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGL-QNRDIIGVAETGSGKTLAFLIPLL 415
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 416 LWITS----LPKI--ERLEEADQ-GP----YSIILAPTRELAQQIEEETNKFGQPLGIRT 464
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 465 VVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMID 521
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 522 MGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 573
>gi|313146179|ref|ZP_07808372.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|423279249|ref|ZP_17258162.1| hypothetical protein HMPREF1203_02379 [Bacteroides fragilis HMW
610]
gi|313134946|gb|EFR52306.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|404585418|gb|EKA90034.1| hypothetical protein HMPREF1203_02379 [Bacteroides fragilis HMW
610]
Length = 427
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 125/230 (54%), Gaps = 46/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ L L ++K++ + G+ PTPIQ+ IP QGKD++G A+TG+GKT AF +PI+Q
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILL-QGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L + + G ++AL++TPTRELA+Q+ + + + ++
Sbjct: 62 KLYKTDHRKG------------------IKALVLTPTRELAIQIGESFEAYGRYTGLKHA 103
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + Q L+ +++V TPGRL +L+S G V L++L FFVLDEADRM++
Sbjct: 104 VIFGGVGQKPQTDALRGGIQILVATPGRLLDLISQG---FVSLNSLDFFVLDEADRMLDM 160
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+ +LP KRQTL FSAT+
Sbjct: 161 GFIHDIKRILKLLPT------------------------KRQTLFFSATM 186
>gi|171696192|ref|XP_001913020.1| hypothetical protein [Podospora anserina S mat+]
gi|170948338|emb|CAP60502.1| unnamed protein product [Podospora anserina S mat+]
Length = 715
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 129/238 (54%), Gaps = 17/238 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W E L L+ ++ +G+ EP+PIQ+A IP A Q +D+IG A TGSGKT A
Sbjct: 276 IPNPMRSWEESNLPRRLLDIVHDVGYDEPSPIQRASIPIAL-QARDLIGVAVTGSGKTAA 334
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F LP++ + E L + + P ALI+ PTREL Q+ + ++ A
Sbjct: 335 FLLPLLVYISE--------LPPLNDVNKNDGPY----ALILAPTRELVQQIENEARKFAT 382
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ VV IVGG S E+Q L+ E++V TPGRL + + E+ L+ + ++DE
Sbjct: 383 PLGFTVVSIVGGHSLEEQAYALRNGAEIIVATPGRLVDCL---ERRLLVFTQCCYIIMDE 439
Query: 348 ADRMIENGHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G L I+D LP+TN + ++E Q + + RQT++++AT+
Sbjct: 440 ADRMIDQGFEEPLTKILDALPVTNEKPDTEEAENPQLMKKYLGGKDRYRQTMMYTATM 497
>gi|384495385|gb|EIE85876.1| hypothetical protein RO3G_10586 [Rhizopus delemar RA 99-880]
Length = 958
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 136/270 (50%), Gaps = 52/270 (19%)
Query: 149 VTVSNGPDDAEEELVSEAEIST-----EFDAWNELRLHPLLMKSIYRLGFKEPTPIQKAC 203
+ VS D+ +E+ ++ ++ + + + L + K++ GFK PTPIQ+ C
Sbjct: 130 IKVSESDDEQDEKFIASETMAANRKNKKSGGFQSMGLSNPIFKAVLHKGFKVPTPIQRKC 189
Query: 204 IPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHL 263
IP QG D++G A TGSGKT AF +P+++RL K G
Sbjct: 190 IPLVL-QGDDVVGMARTGSGKTAAFLIPMLERLKAHSAKTGA------------------ 230
Query: 264 RALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRL 323
R+L+++P+RELALQ KE+ K ++R IVGG S ++Q ++ + P++++ TPGRL
Sbjct: 231 RSLVLSPSRELALQTQKVCKELMKYTDLRSCCIVGGDSLDEQFEMIASNPDILIATPGRL 290
Query: 324 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQT 383
L E +L +L T+ + V DEADR+ E G +L I+ LP
Sbjct: 291 LHL--AVEMNL-DLRTVEYVVFDEADRLFEMGFAIQLHEILSRLP--------------- 332
Query: 384 CVTVSSLQRKKRQTLVFSATIA-LSADFRK 412
RQTL+FSAT+ + DF K
Sbjct: 333 ---------PNRQTLLFSATLPKMLVDFAK 353
>gi|389584149|dbj|GAB66882.1| pre-mRNA splicing factor RNA helicase PRP28 [Plasmodium cynomolgi
strain B]
Length = 1104
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 125/230 (54%), Gaps = 16/230 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L L+K+I + +++PTPIQ IP A +D+IG AETGSGKT AF LP++
Sbjct: 678 WEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEM-RDLIGIAETGSGKTAAFVLPMLA 736
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K L E + P ALII P+RELA+Q+ D + A + R V
Sbjct: 737 YV--------KQLPPLTYETSQDGP----YALIIAPSRELAIQIFDETNKFASYCSCRTV 784
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+VGG + E Q L+ E+++GTPGR+ + + EK L+ ++ +LDEADRM++
Sbjct: 785 AVVGGRNAEAQAFELRKGVEIIIGTPGRIQDCL---EKAYTVLNQCNYVILDEADRMMDM 841
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G + I+D +P +N +E + Q + + R R T +FSAT+
Sbjct: 842 GFEDSVHFILDKIPTSNLKSEDDALALQEEMMAKAGHRLYRLTQMFSATM 891
>gi|395763064|ref|ZP_10443733.1| ATP-dependent RNA helicase [Janthinobacterium lividum PAMC 25724]
Length = 468
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 132/237 (55%), Gaps = 35/237 (14%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ L LHP ++ ++ G+ PT +Q IPAA +G+D++ +++TGSGKT AF LP +
Sbjct: 3 FESLGLHPSIIAALTESGYTAPTAVQSQAIPAAI-EGRDLLVSSQTGSGKTAAFMLPSLH 61
Query: 235 RLLE-EREKAGKMLEEKGEEAEKYAPKGHLRA-----LIITPTRELALQVTDHLKEVAKG 288
+L E+ AGK ++ + + + +A L++TPTRELALQVT + + + G
Sbjct: 62 KLASAEQSAAGKTPNQEMQASRARGERPRFKAAQPKMLVLTPTRELALQVTTNTDKYSSG 121
Query: 289 IN-VRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
I ++ V I+GGM KQ +LL PE++V TPGRL + M G+ ++ L VLDE
Sbjct: 122 IRRIKAVSILGGMPYPKQMQLLAKNPEILVATPGRLIDHMDSGK---IDFSQLEILVLDE 178
Query: 348 ADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRM++ G +++ I++ P EG RQT++FSAT+
Sbjct: 179 ADRMLDMGFIDDIEKIVEATP------EG------------------RQTMLFSATL 211
>gi|324505355|gb|ADY42303.1| ATP-dependent RNA helicase DDX23 [Ascaris suum]
Length = 515
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 136/232 (58%), Gaps = 16/232 (6%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L ++ I ++G+KEPTPIQ+ IP Q +DIIG AETGSGKT AF +P++
Sbjct: 87 WAEAGLPSEVLDVIIKIGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFLIPLLV 145
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ K+ + +++ YA +I+ PTRELA Q+ + + + + +R V
Sbjct: 146 WI----TSLPKIQSNEDQDSGPYA-------IIMAPTRELAQQIEEETVKFGQLLGIRTV 194
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
++GG S E+Q L+ E+V+ TPGRL +++ E + L ++ +LDEADRM++
Sbjct: 195 SVIGGASREEQGLKLRLGVEVVIATPGRLLDVL---ENRYLSLDQCTYVILDEADRMLDM 251
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKK-RQTLVFSATIA 405
G E+Q +++ +P+TN + + + + + + +KK RQT++F+AT++
Sbjct: 252 GFEPEVQKVLEYIPVTNLKPDTEEAEKEESIMENFYSKKKYRQTVMFTATMS 303
>gi|390933807|ref|YP_006391312.1| DEAD/DEAH box helicase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569308|gb|AFK85713.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 513
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 130/230 (56%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L+ ++K+I +GF+EP+ IQ IP +G D+IG AETG+GKTLA+G PI+
Sbjct: 3 FKELNLNEKILKAIDDMGFEEPSKIQSEVIPVLL-EGLDVIGQAETGTGKTLAYGAPIIN 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ G + LI+TPTRELA+QV D L + K VR++
Sbjct: 62 NF--------------------SSNDGKVFCLILTPTRELAIQVNDELARIGKYSKVRLL 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
P+ GG+ ++Q + +K ++VVGTPGR+ +L+ ++++++L ++ + V+DEAD M++
Sbjct: 102 PVYGGVQIDRQIKAIKRGVDIVVGTPGRVLDLI---KRNVLDLKSVRYLVIDEADEMLDM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ II N +N ++RQT++FSAT+
Sbjct: 159 GFIDDIKEII------NHTN------------------RERQTMMFSATM 184
>gi|257081095|ref|ZP_05575456.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis E1Sol]
gi|256989125|gb|EEU76427.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis E1Sol]
Length = 513
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 133/254 (52%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+ ++ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELGLAPELLSAVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLN 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +A+ +G L+I PTRELA+Q + L + + +RV
Sbjct: 62 KI----------------DADNRVIQG----LVIAPTRELAIQTQEELFRLGRDKKIRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGRL + ++ + ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRLLDHIN---RRTLKLETVETLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P ++RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------EQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQ 423
F K+ +H +K K+
Sbjct: 195 FMKQPEHVKIKAKE 208
>gi|255971301|ref|ZP_05421887.1| helicase [Enterococcus faecalis T1]
gi|256617719|ref|ZP_05474565.1| helicase [Enterococcus faecalis ATCC 4200]
gi|256761605|ref|ZP_05502185.1| helicase [Enterococcus faecalis T3]
gi|256854305|ref|ZP_05559669.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis T8]
gi|256957293|ref|ZP_05561464.1| helicase [Enterococcus faecalis DS5]
gi|256959973|ref|ZP_05564144.1| helicase [Enterococcus faecalis Merz96]
gi|256964332|ref|ZP_05568503.1| helicase [Enterococcus faecalis HIP11704]
gi|257077733|ref|ZP_05572094.1| helicase [Enterococcus faecalis JH1]
gi|257083763|ref|ZP_05578124.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis Fly1]
gi|257086188|ref|ZP_05580549.1| helicase [Enterococcus faecalis D6]
gi|257089260|ref|ZP_05583621.1| helicase [Enterococcus faecalis CH188]
gi|257415413|ref|ZP_05592407.1| helicase [Enterococcus faecalis ARO1/DG]
gi|257418444|ref|ZP_05595438.1| helicase [Enterococcus faecalis T11]
gi|257421095|ref|ZP_05598085.1| ATP-dependent RNA helicase [Enterococcus faecalis X98]
gi|294781261|ref|ZP_06746607.1| DEAD/DEAH box helicase [Enterococcus faecalis PC1.1]
gi|300859873|ref|ZP_07105961.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
TUSoD Ef11]
gi|384517892|ref|YP_005705197.1| DEAD/DEAH box helicase [Enterococcus faecalis 62]
gi|397699239|ref|YP_006537027.1| DEAD/DEAH box helicase family protein [Enterococcus faecalis D32]
gi|428766354|ref|YP_007152465.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis str. Symbioflor 1]
gi|430358725|ref|ZP_19425485.1| helicase [Enterococcus faecalis OG1X]
gi|430367031|ref|ZP_19427744.1| helicase [Enterococcus faecalis M7]
gi|255962319|gb|EET94795.1| helicase [Enterococcus faecalis T1]
gi|256597246|gb|EEU16422.1| helicase [Enterococcus faecalis ATCC 4200]
gi|256682856|gb|EEU22551.1| helicase [Enterococcus faecalis T3]
gi|256709865|gb|EEU24909.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis T8]
gi|256947789|gb|EEU64421.1| helicase [Enterococcus faecalis DS5]
gi|256950469|gb|EEU67101.1| helicase [Enterococcus faecalis Merz96]
gi|256954828|gb|EEU71460.1| helicase [Enterococcus faecalis HIP11704]
gi|256985763|gb|EEU73065.1| helicase [Enterococcus faecalis JH1]
gi|256991793|gb|EEU79095.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis Fly1]
gi|256994218|gb|EEU81520.1| helicase [Enterococcus faecalis D6]
gi|256998072|gb|EEU84592.1| helicase [Enterococcus faecalis CH188]
gi|257157241|gb|EEU87201.1| helicase [Enterococcus faecalis ARO1/DG]
gi|257160272|gb|EEU90232.1| helicase [Enterococcus faecalis T11]
gi|257162919|gb|EEU92879.1| ATP-dependent RNA helicase [Enterococcus faecalis X98]
gi|294451597|gb|EFG20053.1| DEAD/DEAH box helicase [Enterococcus faecalis PC1.1]
gi|300850691|gb|EFK78440.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
TUSoD Ef11]
gi|323480025|gb|ADX79464.1| DEAD/DEAH box helicase family protein [Enterococcus faecalis 62]
gi|397335878|gb|AFO43550.1| DEAD/DEAH box helicase family protein [Enterococcus faecalis D32]
gi|427184527|emb|CCO71751.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis str. Symbioflor 1]
gi|429513550|gb|ELA03129.1| helicase [Enterococcus faecalis OG1X]
gi|429516845|gb|ELA06321.1| helicase [Enterococcus faecalis M7]
Length = 515
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 133/254 (52%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+ ++ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELGLAPELLSAVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLN 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +A+ +G L+I PTRELA+Q + L + + +RV
Sbjct: 62 KI----------------DADNRVIQG----LVIAPTRELAIQTQEELFRLGRDKKIRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGRL + ++ + ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRLLDHIN---RRTLKLETVETLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P ++RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------EQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQ 423
F K+ +H +K K+
Sbjct: 195 FMKQPEHVKIKAKE 208
>gi|68484469|ref|XP_713845.1| hypothetical protein CaO19.8289 [Candida albicans SC5314]
gi|68484548|ref|XP_713805.1| hypothetical protein CaO19.672 [Candida albicans SC5314]
gi|74656226|sp|Q59W52.1|PRP28_CANAL RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|46435319|gb|EAK94703.1| hypothetical protein CaO19.672 [Candida albicans SC5314]
gi|46435361|gb|EAK94744.1| hypothetical protein CaO19.8289 [Candida albicans SC5314]
Length = 581
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 131/232 (56%), Gaps = 23/232 (9%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
WNE ++ L+ I +LG++EPT +Q+A IP A + +D++G AETGSGKTLAF +P++
Sbjct: 170 WNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKK-RDVVGVAETGSGKTLAFLIPVLN 228
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L E K + E P G LI+ PTRELALQ+T ++ K + +V+
Sbjct: 229 YILSIDENYLKYEKISNE------PVG----LILAPTRELALQITKEAEKFCKKLGYQVL 278
Query: 295 PIVGGMSTEKQ-ERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
PI+GG + ++ + L+V TPGR L+ E+ +V+L V+DEADRMI+
Sbjct: 279 PIIGGHHYQDTINKIDQTGVHLIVATPGR---LVDSIERKIVDLSKCYCLVMDEADRMID 335
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G ++L ++D LP +Q + + +KR T++F+ATI+
Sbjct: 336 MGFEKDLNKVLDKLPT--------EKQLSSTIDGRIFHLEKRSTMMFTATIS 379
>gi|383854652|ref|XP_003702834.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Megachile
rotundata]
Length = 784
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 143/232 (61%), Gaps = 16/232 (6%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W E ++ I ++G+K+ TPIQ+ IP Q +DIIG AETGSGKTLAF +P++
Sbjct: 357 SWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGL-QNRDIIGVAETGSGKTLAFLIPLL 415
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ K+ E+ EEA++ P ++I+ PTRELA Q+ + + + + +R
Sbjct: 416 LWITS----LPKI--ERLEEADQ-GPY----SIILAPTRELAQQIEEETNKFGQPLGIRT 464
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 465 VVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMID 521
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQ-SEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++Q I++ +P+TN + + +E + + + ++K RQT++F+AT+
Sbjct: 522 MGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATM 573
>gi|444335472|ref|YP_007391841.1| ATP-dependent RNA helicase DeaD [Blattabacterium sp. (Blatta
orientalis) str. Tarazona]
gi|444299851|gb|AGD98088.1| ATP-dependent RNA helicase DeaD [Blattabacterium sp. (Blatta
orientalis) str. Tarazona]
Length = 542
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 124/224 (55%), Gaps = 50/224 (22%)
Query: 184 LMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQRL-LEEREK 242
+++++ +G K PTPIQK IP GKD+I A+TG+GKT AFGLPI+Q++ LE R
Sbjct: 14 IIQALEDIGIKTPTPIQKEVIPYLLKSGKDLIALAQTGTGKTAAFGLPIIQKINLEFR-- 71
Query: 243 AGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGIN-VRVVPIVGGMS 301
P+ ALI+ PTREL +Q+T L ++ I+ ++++P+ GG+S
Sbjct: 72 ---------------FPQ----ALILCPTRELCIQITRDLSRFSRYISLIKIIPLYGGVS 112
Query: 302 TEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 361
E Q L+ + ++VGTPGR+ +L+ + HL + + + VLDEAD M+ G EL
Sbjct: 113 IENQMLSLQKKTHIIVGTPGRIIDLIERKKLHLSD---IKYLVLDEADEMLNMGFKEELD 169
Query: 362 SIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
SII LP KKRQ+L+FSAT++
Sbjct: 170 SIIIKLP------------------------KKRQSLLFSATMS 189
>gi|424662680|ref|ZP_18099717.1| hypothetical protein HMPREF1205_03066 [Bacteroides fragilis HMW
616]
gi|404576370|gb|EKA81108.1| hypothetical protein HMPREF1205_03066 [Bacteroides fragilis HMW
616]
Length = 427
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 125/230 (54%), Gaps = 46/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ L L ++K++ + G+ PTPIQ+ IP QGKD++G A+TG+GKT AF +PI+Q
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILL-QGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+L + + G ++AL++TPTRELA+Q+ + + + ++
Sbjct: 62 KLYKTDHRKG------------------IKALVLTPTRELAIQIGESFEAYGRYTGLKHA 103
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ + Q L+ +++V TPGRL +L+S G V L++L FFVLDEADRM++
Sbjct: 104 VIFGGVGQKPQTDALRGGIQILVATPGRLLDLISQG---FVSLNSLDFFVLDEADRMLDM 160
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G +++ I+ +LP KRQTL FSAT+
Sbjct: 161 GFIHDIKRILKLLPT------------------------KRQTLFFSATM 186
>gi|378728301|gb|EHY54760.1| adenosinetriphosphatase [Exophiala dermatitidis NIH/UT8656]
Length = 813
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 119/238 (50%), Gaps = 48/238 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ + L ++K++ L F PTPIQ IP A QG D++G+A TGSGKT AF LPI+
Sbjct: 287 SFQQFSLSRPILKALAALSFTAPTPIQARAIPVAL-QGLDVVGSAVTGSGKTAAFLLPIL 345
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKEVAKGINV 291
+RLL Y P+ R I+ PTRELA+Q + +A+ ++
Sbjct: 346 ERLL-------------------YRPRKVPTTRVAILMPTRELAVQCYNVATALARFTDI 386
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+VGG +QE +LK RP++V+ TPGR + M +VE + VLDEADRM
Sbjct: 387 TFAQVVGGFPLREQEAILKKRPDVVIATPGRFIDHMRNSASFVVE--NIEILVLDEADRM 444
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+E G EL I+ +P K RQT++FSAT+ S D
Sbjct: 445 LETGFEDELNEILKTIP------------------------KGRQTMLFSATMTDSVD 478
>gi|121601761|ref|YP_989161.1| DEAD/DEAH box helicase domain-containing protein [Bartonella
bacilliformis KC583]
gi|421760972|ref|ZP_16197779.1| DEAD/DEAH box helicase domain-containing protein [Bartonella
bacilliformis INS]
gi|120613938|gb|ABM44539.1| DEAD/DEAH box helicase domain/helicase conserved C-terminal domain
protein [Bartonella bacilliformis KC583]
gi|411173805|gb|EKS43846.1| DEAD/DEAH box helicase domain-containing protein [Bartonella
bacilliformis INS]
Length = 471
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 128/232 (55%), Gaps = 43/232 (18%)
Query: 173 DAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPI 232
+ + +L L LL+K++ G EP PIQ+ IP +G+DI+G A+TGSGKTLAFGLPI
Sbjct: 17 NVFTKLGLSTLLIKNLLNAGISEPKPIQEQAIPVML-KGRDILGIAQTGSGKTLAFGLPI 75
Query: 233 MQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 292
+ ++L +K +PK RALI+ PTRELA+Q+ + + V KG ++
Sbjct: 76 LSQILTF--------------GDKRSPKTA-RALILVPTRELAVQIEEMISAVVKGAHLS 120
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
IVGG+S KQ + + A ++V+ TPGRL +L+ + V+L F VLDEADRM+
Sbjct: 121 TCLIVGGVSRFKQIKRMGAGVDVVIATPGRLMDLV---REKFVDLSRSRFLVLDEADRML 177
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+ G +++ I +L C K+ QT +FSAT+
Sbjct: 178 DMGFINDVRRIAKLL----------------C--------KEHQTALFSATM 205
>gi|167761792|ref|ZP_02433919.1| hypothetical protein BACSTE_00133 [Bacteroides stercoris ATCC
43183]
gi|167700298|gb|EDS16877.1| DEAD/DEAH box helicase [Bacteroides stercoris ATCC 43183]
Length = 372
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 127/232 (54%), Gaps = 49/232 (21%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ +L + ++K+I G+ PTPIQ IPAA GKDI+G A+TG+GKT AF +PI+Q
Sbjct: 3 FKDLNITEPILKAIEEKGYANPTPIQVKAIPAAL-TGKDILGCAQTGTGKTAAFAIPIIQ 61
Query: 235 RL--LEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVR 292
L L+ R+K+ ++ALI+TPTRELALQ+++ + + AK VR
Sbjct: 62 HLQVLKNRDKS-------------------IKALILTPTRELALQISECIDDYAKYTQVR 102
Query: 293 VVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 352
I GG++ Q +L +++V TPGRL +LM+ G H L + FVLDEADRM+
Sbjct: 103 HGVIFGGVNQRAQVNMLHKGVDILVATPGRLLDLMNQGYIH---LDNVRHFVLDEADRML 159
Query: 353 ENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+ G +++ ++ LP K++QTL FSAT+
Sbjct: 160 DMGFIHDIKRLLPKLP------------------------KEKQTLFFSATM 187
>gi|228989414|ref|ZP_04149403.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus pseudomycoides
DSM 12442]
gi|228770361|gb|EEM18936.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus pseudomycoides
DSM 12442]
Length = 528
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 124/230 (53%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L L++S+ +GF+E TPIQ IP A QGKDIIG A+TG+GKT AFGLP++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +E ++ ++I PTRELA+QV + L ++ K VR++
Sbjct: 63 KVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRIL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK P ++VGTPGR+ + ++ + + L + VLDEAD M+
Sbjct: 103 PIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P T+ QTL+FSAT+
Sbjct: 160 GFIEDIEAILTDVPETH------------------------QTLLFSATM 185
>gi|228995609|ref|ZP_04155275.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus mycoides
Rock3-17]
gi|228764181|gb|EEM13062.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus mycoides
Rock3-17]
Length = 536
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 124/230 (53%), Gaps = 48/230 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L L++S+ +GF+E TPIQ IP A QGKDIIG A+TG+GKT AFGLP++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +E ++ ++I PTRELA+QV + L ++ K VR++
Sbjct: 63 KVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRIL 102
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
PI GG +Q R LK P ++VGTPGR+ + ++ + + L + VLDEAD M+
Sbjct: 103 PIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNM 159
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G ++++I+ +P T+ QTL+FSAT+
Sbjct: 160 GFIEDIEAILTDVPETH------------------------QTLLFSATM 185
>gi|238491382|ref|XP_002376928.1| DEAD/DEAH box helicase, putative [Aspergillus flavus NRRL3357]
gi|220697341|gb|EED53682.1| DEAD/DEAH box helicase, putative [Aspergillus flavus NRRL3357]
Length = 665
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 144/251 (57%), Gaps = 21/251 (8%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+W+E L LM+ + ++G+KEPTPIQ+A IP A Q +D+IG A TGSGKT +F LP++
Sbjct: 249 SWDESGLPKRLMELVNKVGYKEPTPIQRAAIPIAM-QSRDLIGVAVTGSGKTASFLLPLL 307
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
+ E + +E E G A+++ PTRELA Q+ K+ + + V
Sbjct: 308 VYIAEL---------PRIDEFEWRKNDGPY-AIVLAPTRELAQQIEIEAKKFTEPLGFNV 357
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
V IVGG S E+Q L+ E+++ TPGRL + + E+ ++ L + ++DEADRMI+
Sbjct: 358 VSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCI---ERRMLVLSQCCYVIMDEADRMID 414
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSS---LQRKKRQTLVFSATIALSAD- 409
G + I+D LP++N + SE+ + + +S + + RQT++++AT+ + +
Sbjct: 415 LGFEEPVNKILDALPVSN--EKPDSEEAENSMAMSQHIGTKDRYRQTMMYTATMPTAVER 472
Query: 410 -FRKKLKHGSL 419
RK L+ ++
Sbjct: 473 IARKYLRRPAI 483
>gi|114048383|ref|YP_738933.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-7]
gi|113889825|gb|ABI43876.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-7]
Length = 433
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 125/231 (54%), Gaps = 43/231 (18%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ P ++++I G+++ TPIQ+ IPA +G+D++ +A+TG+GKT AF LPI+Q
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAI-RRGQDVLASAQTGTGKTAAFALPILQ 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
KM+E E K + R LI+TPTRELA QV D+++ +K +N V+
Sbjct: 62 ----------KMVENPSETL-----KSNARVLILTPTRELAAQVADNVEAYSKYLNFSVL 106
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
I GG+ E Q + LK +++V TPGRL E ++ + L ++ F VLDEADRM++
Sbjct: 107 TIYGGVKVETQAQKLKRGADIIVATPGRLLEHLTACN---LSLSSVDFLVLDEADRMLDM 163
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G ++Q I+ + KKRQ L+FSAT +
Sbjct: 164 GFNADIQKILQAV------------------------NKKRQNLLFSATFS 190
>gi|374328740|ref|YP_005078924.1| DEAD/DEAH box helicase [Pseudovibrio sp. FO-BEG1]
gi|359341528|gb|AEV34902.1| DEAD/DEAH box helicase domain protein [Pseudovibrio sp. FO-BEG1]
Length = 453
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 126/235 (53%), Gaps = 46/235 (19%)
Query: 170 TEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFG 229
T+FD + + +KS G+ EPTPIQ+ IP GKD++G A+TG+GKT AF
Sbjct: 2 TDFDKLGVAKPFQIALKS---KGYSEPTPIQENAIPYIL-DGKDLLGLAQTGTGKTAAFA 57
Query: 230 LPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGI 289
+P++QRLLE R +A APK +R+LI+TPTRELA Q+T ++K A
Sbjct: 58 VPLLQRLLESRYRA--------------APK-SVRSLILTPTRELADQITKNIKAYAGRT 102
Query: 290 NVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 349
+ +VGG+ Q R L+ +++V TPGRL +L K+ V L FVLDEAD
Sbjct: 103 KMYTSCVVGGVPFPPQFRALQRGLDVLVATPGRLLDLH---RKNGVSFDELEIFVLDEAD 159
Query: 350 RMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
+M++ G EL+ I +LP KKRQTL FSAT+
Sbjct: 160 QMLDLGFIAELEEIAYLLP------------------------KKRQTLFFSATM 190
>gi|355564184|gb|EHH20684.1| Putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
Length = 820
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 140/240 (58%), Gaps = 19/240 (7%)
Query: 168 ISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLA 227
I +W + L P +++ I + G+KEPTPIQ+ IP Q +DIIG AETGSGKT A
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 444
Query: 228 FGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAK 287
F +P++ + K ++ EE+++ P A+I+ PTRELA Q+ + + K
Sbjct: 445 FLIPLLV-WITTLPKIDRI-----EESDQ-GPY----AIILAPTRELAQQIEEETIKFGK 493
Query: 288 GINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 347
+ +R V ++GG+S E Q L+ E+V+ TPGRL +++ E + L ++ +LDE
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVL---ENCSLVLSRCTYVILDE 550
Query: 348 ADRMIENGHFRELQSIIDMLPMTN---GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
ADRMI+ G ++Q I++ +P++N ++E + + + S + K RQT++F+AT+
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQKPDTDEADNPE-KMLANFESGKHKYRQTVMFTATM 609
>gi|367028222|ref|XP_003663395.1| hypothetical protein MYCTH_2118610 [Myceliophthora thermophila ATCC
42464]
gi|347010664|gb|AEO58150.1| hypothetical protein MYCTH_2118610 [Myceliophthora thermophila ATCC
42464]
Length = 1400
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 122/238 (51%), Gaps = 48/238 (20%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
++ + L +++ + +GF +PTPIQ IP A GKD++G A TGSGKT AF +PI+
Sbjct: 287 SFQSMSLSRPILRGLTSVGFTKPTPIQAKTIPIAL-MGKDVVGGAVTGSGKTAAFIVPIL 345
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKEVAKGINV 291
+RLL Y PK R +I+TPTRELA+Q ++A ++
Sbjct: 346 ERLL-------------------YRPKKVPTTRVVILTPTRELAIQCHSVATKLASHTDI 386
Query: 292 RVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 351
+ VGG+S + QE L+ RP++V+ TPGR + M VE T+ VLDEADRM
Sbjct: 387 KFCLAVGGLSLKVQEGELRLRPDVVIATPGRFIDHMRNSASFAVE--TVEILVLDEADRM 444
Query: 352 IENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIALSAD 409
+E+G EL I+ LP K RQT++FSAT+ + D
Sbjct: 445 LEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSTVD 478
>gi|255973920|ref|ZP_05424506.1| helicase [Enterococcus faecalis T2]
gi|255966792|gb|EET97414.1| helicase [Enterococcus faecalis T2]
Length = 515
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 133/254 (52%), Gaps = 53/254 (20%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
+ EL L P L+ ++ R GF+E TPIQ IP A GKD+IG A+TG+GKT AFGLP++
Sbjct: 3 FKELGLAPELLSAVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLN 61
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
++ +A+ +G L+I PTRELA+Q + L + + +RV
Sbjct: 62 KI----------------DADNRVIQG----LVIAPTRELAIQTQEELFRLGRDKKIRVQ 101
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
+ GG +Q R LK RP +VVGTPGRL + ++ + ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRLLDHIN---RRTLKLETVETLVLDEADEMLNM 158
Query: 355 GHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA-----LSAD 409
G +++ II +P ++RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------EQRQTLLFSATMPPAIKNIGVK 194
Query: 410 FRKKLKHGSLKLKQ 423
F K+ +H +K K+
Sbjct: 195 FMKQPEHVKIKAKE 208
>gi|91787410|ref|YP_548362.1| DEAD/DEAH box helicase [Polaromonas sp. JS666]
gi|91696635|gb|ABE43464.1| DEAD/DEAH box helicase-like protein [Polaromonas sp. JS666]
Length = 492
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 128/232 (55%), Gaps = 40/232 (17%)
Query: 174 AWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIM 233
+++ L L L +++ +G++ TPIQ+ IP QGKD++GAA+TG+GKT AF LP++
Sbjct: 4 SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVL-QGKDVMGAAQTGTGKTAAFSLPLL 62
Query: 234 QRLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRV 293
QR+L K E A + +RAL++ PTRELA+QV + +K AK N+R
Sbjct: 63 QRML------------KHENASTSPARHPVRALVLLPTRELAVQVAEQVKLYAKHTNLRS 110
Query: 294 VPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 353
+ GGM + Q LK E++V TPGRL + + K+ V L+ + + VLDEADRM++
Sbjct: 111 AVVFGGMDMKPQTLELKQGVEVLVATPGRLLDHIEA--KNTV-LNQVEYVVLDEADRMLD 167
Query: 354 NGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATIA 405
G +LQ I+ LP K+R TL+FSAT +
Sbjct: 168 IGFLPDLQRILSYLP------------------------KQRITLLFSATFS 195
>gi|400602905|gb|EJP70503.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 732
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 127/231 (54%), Gaps = 17/231 (7%)
Query: 175 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGSGKTLAFGLPIMQ 234
W E L L+ I ++G+ EPTPIQ+A IP A Q +D+IG A TGSGKT AF LP++
Sbjct: 297 WKESGLPSRLLNIIEQVGYDEPTPIQRAAIPIAL-QARDLIGVAVTGSGKTAAFLLPLLV 355
Query: 235 RLLEEREKAGKMLEEKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKEVAKGINVRVV 294
+ + L GE + P ALI+ PTREL Q+ K+ + R V
Sbjct: 356 YISD--------LPPLGETNKNDGPY----ALILAPTRELVQQIETEAKKFGDPLGFRSV 403
Query: 295 PIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 354
IVGG S E+Q L+ E++V TPGRL + + E+ L+ L + ++DEADRMI+
Sbjct: 404 SIVGGHSLEEQAYALRNGAEIIVATPGRLIDCI---ERRLLVLSQCCYVIMDEADRMIDM 460
Query: 355 GHFRELQSIIDMLPMTN-GSNEGQSEQTQTCVTVSSLQRKKRQTLVFSATI 404
G + I+D LP++N + ++E + + + RQT++F+AT+
Sbjct: 461 GFEEPVNKILDALPVSNEKPDTEEAEDGRLMQRYVGEKDRYRQTMMFTATM 511
>gi|170691820|ref|ZP_02882984.1| DEAD/DEAH box helicase domain protein [Burkholderia graminis C4D1M]
gi|170143104|gb|EDT11268.1| DEAD/DEAH box helicase domain protein [Burkholderia graminis C4D1M]
Length = 493
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 130/244 (53%), Gaps = 42/244 (17%)
Query: 163 VSEAEISTEFDAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDIIGAAETGS 222
+S+ ++ +++ L P ++K++ G+ PTPIQ IP G+D++GAA+TG+
Sbjct: 1 MSDTAVTPSTATFDQFGLAPDILKAVKESGYTTPTPIQAQAIPVVL-AGRDVMGAAQTGT 59
Query: 223 GKTLAFGLPIMQRLLEEREKAGKMLEEKGEEAEKYAPKGH-LRALIITPTRELALQVTDH 281
GKT +F LPI+QRLL + + +P H +RALI+TPTRELA QV +
Sbjct: 60 GKTASFSLPIIQRLLPQASTSA-------------SPARHPVRALILTPTRELADQVAAN 106
Query: 282 LKEVAKGINVRVVPIVGGMSTEKQERLLKARPELVVGTPGRLWELMSGGEKHLVELHTLS 341
++ AK +R + GG+ Q L+ E+++ TPGRL + + ++ L +
Sbjct: 107 VQSYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHV---QQKTANLGQVQ 163
Query: 342 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNEGQSEQTQTCVTVSSLQRKKRQTLVFS 401
VLDEADRM++ G +LQ I+++LP K+RQTL+FS
Sbjct: 164 ILVLDEADRMLDMGFLPDLQRILNLLP------------------------KERQTLLFS 199
Query: 402 ATIA 405
AT +
Sbjct: 200 ATFS 203
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.129 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,375,545,283
Number of Sequences: 23463169
Number of extensions: 329987820
Number of successful extensions: 2030761
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 20183
Number of HSP's successfully gapped in prelim test: 14481
Number of HSP's that attempted gapping in prelim test: 1790056
Number of HSP's gapped (non-prelim): 119414
length of query: 465
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 319
effective length of database: 8,933,572,693
effective search space: 2849809689067
effective search space used: 2849809689067
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 79 (35.0 bits)