BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 012339
         (465 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O61460|VAB1_CAEEL Ephrin receptor 1 OS=Caenorhabditis elegans GN=vab-1 PE=1 SV=1
          Length = 1122

 Score = 37.0 bits (84), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 26/143 (18%)

Query: 12  ARQRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKLLFHRVDPEAVL---SCKN 68
           A QR ++  ++ M    ++   +   H  +  +T+ R   +LLF+  D +A L   SCK 
Sbjct: 75  ANQRAYVTCNYDM----INPSNWLFSH-FIEVKTARRIYIELLFNTRDCDAYLNPKSCKE 129

Query: 69  VFSSFQKVPRSPTPST------------------GKTPKSDSEMRRKPLGMARDEGELPV 110
            FS + K  ++  P +                  G+  +S+S M  + LGM  D     +
Sbjct: 130 TFSVYLKQFKTSRPGSTKIEKERFSEDIDNWKNIGRLARSNSNMTTETLGMEIDSDTKTI 189

Query: 111 RLLADIDSLFLTCQGLSVHYKLC 133
           R+  +   + L+   + ++Y++C
Sbjct: 190 RIAFEEQGICLSLLNVKIYYRIC 212


>sp|Q9SZM1|EXP20_ARATH Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1
          Length = 256

 Score = 35.4 bits (80), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 11/66 (16%)

Query: 129 HYKLCLPGSPPRSLSSTTFLEPKST--------CNTPQTAVGRLKLDRQAFSALSKTQYH 180
           H + CL GSP   +++T F  P S         CN P+     L+L   AF+ +++T+  
Sbjct: 90  HIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKE---HLELSHAAFTGIAETRAE 146

Query: 181 HLPRSY 186
            +P  Y
Sbjct: 147 MIPIQY 152


>sp|P80299|HYES_RAT Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1
           SV=1
          Length = 554

 Score = 34.7 bits (78), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 236 VEGNGQFGIILVHGFGGGVFSWRHVMGVLARQIGCTVAAFDRPGWGLTS 284
           VE      I L HGF    FSWR+ +  LA Q G  V A D  G+G +S
Sbjct: 251 VEMGSGPAICLCHGFPESWFSWRYQIPALA-QAGFRVLAIDMKGYGDSS 298


>sp|Q8TB40|ABHD4_HUMAN Abhydrolase domain-containing protein 4 OS=Homo sapiens GN=ABHD4
           PE=2 SV=1
          Length = 342

 Score = 33.5 bits (75), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 237 EGNGQFGIILVHGFGGGVFSWRHVMGVLARQIGCTVAAFDRPGWGLTSR 285
           E N +  +++VHGFGGGV  W   M  L+ +   T+  FD  G+G +SR
Sbjct: 64  EQNDRTPLVMVHGFGGGVGLWILNMDSLSAR--RTLHTFDLLGFGRSSR 110


>sp|Q6Q2C2|HYES_PIG Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1
          Length = 555

 Score = 33.5 bits (75), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 243 GIILVHGFGGGVFSWRHVMGVLARQIGCTVAAFDRPGWGLTS 284
            + L HGF    FSWR+ +  LA Q G  V A D  G+G +S
Sbjct: 260 AVCLCHGFPESWFSWRYQIPALA-QAGFRVLAVDMKGYGESS 300


>sp|O27637|MPTE_METTH 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
           OS=Methanothermobacter thermautotrophicus (strain ATCC
           29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
           GN=mptE PE=3 SV=1
          Length = 232

 Score = 32.3 bits (72), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 12/72 (16%)

Query: 203 SATTTTLSEDIPILNLDDTVPDI---EMDSGALEQDVEGNGQFGIILVHGFGGGVFSWRH 259
            ATT  L ED+        +PDI   ++D G +E  +E N Q  +++VH  G  + + R 
Sbjct: 83  GATTALLEEDV--------LPDIIVTDLD-GKMEDIIEANRQGAVVVVHAHGNNLPALRR 133

Query: 260 VMGVLARQIGCT 271
            + +L   IG T
Sbjct: 134 YLPLLQNIIGTT 145


>sp|Q59695|ACOC_PSEPU Dihydrolipoyllysine-residue acetyltransferase component of acetoin
           cleaving system OS=Pseudomonas putida GN=acoC PE=3 SV=1
          Length = 370

 Score = 32.3 bits (72), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 238 GNGQFGIILVHGFGGGVFSWRHVMGVLARQIGCTVAAFDRPGWGLTSR-LRQKDWEE 293
           G G   ++LVHGFGG + +W      LA +    V A D PG G +++ L++ D +E
Sbjct: 130 GEGGTPLVLVHGFGGDLNNWLFNHPALAAE--RRVIALDLPGHGESAKALQRGDLDE 184


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.135    0.400 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,612,833
Number of Sequences: 539616
Number of extensions: 6747210
Number of successful extensions: 16167
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 16167
Number of HSP's gapped (non-prelim): 17
length of query: 465
length of database: 191,569,459
effective HSP length: 121
effective length of query: 344
effective length of database: 126,275,923
effective search space: 43438917512
effective search space used: 43438917512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)