Query 012342
Match_columns 465
No_of_seqs 174 out of 1626
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 07:34:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 5.5E-70 1.9E-74 551.0 36.7 410 9-452 12-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.4E-64 8.2E-69 518.8 37.7 438 10-453 8-479 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 7.3E-61 2.5E-65 488.5 38.5 415 9-453 6-452 (456)
4 2vch_A Hydroquinone glucosyltr 100.0 2.3E-60 8E-65 487.9 40.4 414 10-453 6-469 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 8E-59 2.7E-63 474.6 35.7 406 10-452 9-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.1E-42 1.1E-46 349.2 30.8 371 8-449 10-418 (424)
7 4amg_A Snogd; transferase, pol 100.0 2.9E-40 9.8E-45 331.8 23.4 156 256-432 227-384 (400)
8 1iir_A Glycosyltransferase GTF 100.0 8E-40 2.7E-44 330.6 18.2 358 11-453 1-400 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 1.4E-38 4.9E-43 321.5 16.8 361 11-453 1-401 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 3.6E-37 1.2E-41 309.9 21.6 350 11-451 1-381 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 4.5E-36 1.5E-40 302.8 28.3 352 10-451 20-412 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 3E-35 1E-39 295.2 29.8 355 10-452 4-398 (402)
13 2iyf_A OLED, oleandomycin glyc 100.0 1.4E-34 4.7E-39 293.4 26.0 352 10-449 7-396 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 4.7E-35 1.6E-39 298.0 20.1 345 10-451 20-434 (441)
15 2p6p_A Glycosyl transferase; X 100.0 1.8E-34 6E-39 288.2 22.2 332 11-453 1-380 (384)
16 4fzr_A SSFS6; structural genom 100.0 5.6E-32 1.9E-36 271.4 15.2 160 256-432 217-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 7.8E-31 2.7E-35 263.1 19.4 156 256-432 222-381 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 2.1E-29 7.2E-34 252.0 23.4 170 256-447 208-383 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 1E-27 3.5E-32 241.2 21.9 169 263-451 239-407 (412)
20 2o6l_A UDP-glucuronosyltransfe 99.9 2.1E-26 7.3E-31 202.9 14.7 161 253-431 8-169 (170)
21 3s2u_A UDP-N-acetylglucosamine 99.9 1.8E-22 6E-27 199.9 24.9 137 264-415 178-326 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.7 4.9E-15 1.7E-19 145.9 24.4 167 265-455 182-358 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.5 8.3E-15 2.8E-19 132.8 8.2 132 263-410 25-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.0 1.5E-09 5.1E-14 102.3 10.5 115 266-393 157-274 (282)
25 3okp_A GDP-mannose-dependent a 99.0 1.5E-07 5.2E-12 92.7 25.6 164 266-456 197-381 (394)
26 3c48_A Predicted glycosyltrans 98.8 1.1E-06 3.6E-11 88.2 26.1 169 266-454 242-428 (438)
27 2gek_A Phosphatidylinositol ma 98.7 2.6E-06 9E-11 84.2 23.9 128 268-415 209-351 (406)
28 2iw1_A Lipopolysaccharide core 98.7 1.9E-06 6.6E-11 84.2 21.4 143 266-428 195-353 (374)
29 3dzc_A UDP-N-acetylglucosamine 98.6 7.8E-07 2.7E-11 88.3 17.4 131 265-415 229-369 (396)
30 2r60_A Glycosyl transferase, g 98.6 2.9E-06 9.9E-11 86.7 20.5 94 323-427 334-439 (499)
31 2jjm_A Glycosyl transferase, g 98.6 3E-05 1E-09 76.4 27.2 161 267-453 211-384 (394)
32 2iuy_A Avigt4, glycosyltransfe 98.6 6.2E-06 2.1E-10 79.7 21.4 123 268-412 163-307 (342)
33 3fro_A GLGA glycogen synthase; 98.6 3E-05 1E-09 77.2 26.7 164 268-454 252-430 (439)
34 2f9f_A First mannosyl transfer 98.5 7.1E-07 2.4E-11 77.9 11.5 141 267-428 23-175 (177)
35 4hwg_A UDP-N-acetylglucosamine 98.3 2E-05 7E-10 77.7 18.0 157 266-451 203-374 (385)
36 1v4v_A UDP-N-acetylglucosamine 98.1 6.3E-06 2.1E-10 80.8 8.0 129 266-415 198-336 (376)
37 1vgv_A UDP-N-acetylglucosamine 98.0 8.2E-06 2.8E-10 80.1 8.3 131 265-415 204-344 (384)
38 3ot5_A UDP-N-acetylglucosamine 97.9 1.4E-05 4.9E-10 79.3 7.6 160 265-451 223-392 (403)
39 3beo_A UDP-N-acetylglucosamine 97.7 5.8E-05 2E-09 73.7 8.0 79 324-415 263-344 (375)
40 3qhp_A Type 1 capsular polysac 97.7 0.0004 1.4E-08 59.2 11.7 139 267-428 2-156 (166)
41 2x6q_A Trehalose-synthase TRET 97.5 0.0016 5.5E-08 64.3 15.0 166 267-452 231-412 (416)
42 2bfw_A GLGA glycogen synthase; 97.5 0.0026 9.1E-08 55.7 14.6 140 268-426 37-195 (200)
43 2vsy_A XCC0866; transferase, g 97.3 0.0042 1.5E-07 64.1 16.2 84 324-415 434-524 (568)
44 2xci_A KDO-transferase, 3-deox 97.2 0.0013 4.3E-08 64.5 10.4 98 325-431 261-364 (374)
45 3q3e_A HMW1C-like glycosyltran 97.1 0.003 1E-07 65.1 11.5 140 267-415 441-590 (631)
46 3oy2_A Glycosyltransferase B73 97.0 0.0059 2E-07 60.1 12.9 136 266-415 183-357 (413)
47 1rzu_A Glycogen synthase 1; gl 96.9 0.018 6.2E-07 58.0 16.1 162 267-454 291-475 (485)
48 4gyw_A UDP-N-acetylglucosamine 96.8 0.022 7.7E-07 60.6 15.9 103 264-370 520-630 (723)
49 2qzs_A Glycogen synthase; glyc 96.8 0.024 8.2E-07 57.1 15.5 163 266-454 291-476 (485)
50 3rhz_A GTF3, nucleotide sugar 96.7 0.0027 9.2E-08 61.2 7.4 111 325-451 215-337 (339)
51 3s28_A Sucrose synthase 1; gly 95.5 0.16 5.4E-06 54.5 14.2 93 323-426 639-748 (816)
52 2hy7_A Glucuronosyltransferase 94.9 0.16 5.5E-06 49.9 11.3 115 268-415 223-354 (406)
53 2x0d_A WSAF; GT4 family, trans 94.8 0.068 2.3E-06 52.8 8.3 81 323-415 294-381 (413)
54 3vue_A GBSS-I, granule-bound s 94.7 0.17 5.9E-06 51.7 11.3 137 266-412 326-476 (536)
55 3vue_A GBSS-I, granule-bound s 91.1 0.12 4.3E-06 52.8 3.7 38 9-48 8-53 (536)
56 1psw_A ADP-heptose LPS heptosy 87.4 2.5 8.6E-05 39.9 9.7 45 11-55 1-47 (348)
57 3tov_A Glycosyl transferase fa 84.6 1.3 4.3E-05 42.4 6.0 46 10-55 8-55 (349)
58 2gt1_A Lipopolysaccharide hept 82.9 4.2 0.00014 38.1 8.8 134 266-414 178-323 (326)
59 2x6q_A Trehalose-synthase TRET 81.2 2.1 7.1E-05 41.5 6.1 41 9-49 39-81 (416)
60 2x0d_A WSAF; GT4 family, trans 80.5 0.94 3.2E-05 44.5 3.3 40 9-48 45-89 (413)
61 3t5t_A Putative glycosyltransf 80.3 14 0.00047 37.0 11.7 111 325-454 353-473 (496)
62 1uqt_A Alpha, alpha-trehalose- 78.0 15 0.00052 36.6 11.3 106 329-454 337-454 (482)
63 1rzu_A Glycogen synthase 1; gl 74.9 2.7 9.1E-05 41.8 4.8 38 11-48 1-44 (485)
64 2qzs_A Glycogen synthase; glyc 73.9 3 0.0001 41.3 4.9 38 11-48 1-44 (485)
65 3zqu_A Probable aromatic acid 71.2 7.6 0.00026 34.0 6.2 45 10-55 4-48 (209)
66 3dfz_A SIRC, precorrin-2 dehyd 68.8 24 0.00082 31.1 9.0 153 259-433 26-186 (223)
67 3nb0_A Glycogen [starch] synth 68.1 10 0.00035 39.5 7.2 41 329-371 498-551 (725)
68 1ccw_A Protein (glutamate muta 67.9 9.4 0.00032 30.8 5.8 37 10-46 3-39 (137)
69 2iz6_A Molybdenum cofactor car 63.6 31 0.0011 29.1 8.3 102 253-371 34-140 (176)
70 1sbz_A Probable aromatic acid 61.9 11 0.00039 32.5 5.4 44 11-55 1-45 (197)
71 1id1_A Putative potassium chan 60.9 5.4 0.00018 32.6 3.1 33 10-47 3-35 (153)
72 2yxb_A Coenzyme B12-dependent 60.2 11 0.00037 31.4 4.9 38 9-46 17-54 (161)
73 1y80_A Predicted cobalamin bin 57.5 17 0.0006 31.5 6.0 44 10-53 88-131 (210)
74 3hbm_A UDP-sugar hydrolase; PS 55.6 4.4 0.00015 37.4 1.8 34 11-48 1-38 (282)
75 4b4o_A Epimerase family protei 55.1 13 0.00045 33.9 5.0 32 11-46 1-32 (298)
76 2g1u_A Hypothetical protein TM 55.1 14 0.00047 30.2 4.7 38 4-46 13-50 (155)
77 3qjg_A Epidermin biosynthesis 53.8 15 0.00052 31.0 4.7 41 10-51 5-45 (175)
78 3lrx_A Putative hydrogenase; a 53.5 9.2 0.00031 31.6 3.3 35 11-48 24-58 (158)
79 2i2x_B MTAC, methyltransferase 53.5 20 0.00069 32.3 5.9 37 10-46 123-159 (258)
80 1psw_A ADP-heptose LPS heptosy 52.4 14 0.00049 34.5 4.9 96 265-368 179-286 (348)
81 1mvl_A PPC decarboxylase athal 52.1 18 0.00063 31.5 5.1 41 10-52 19-59 (209)
82 1kjn_A MTH0777; hypotethical p 49.2 31 0.0011 28.1 5.5 47 10-56 6-54 (157)
83 2r8r_A Sensor protein; KDPD, P 49.0 27 0.00093 30.9 5.7 39 10-48 6-44 (228)
84 2ejb_A Probable aromatic acid 48.9 34 0.0011 29.3 6.2 43 12-55 3-45 (189)
85 1lss_A TRK system potassium up 48.5 12 0.00041 29.5 3.2 32 10-46 4-35 (140)
86 3beo_A UDP-N-acetylglucosamine 47.6 17 0.00059 34.1 4.7 38 10-48 8-47 (375)
87 3ezx_A MMCP 1, monomethylamine 46.7 33 0.0011 29.9 6.0 39 9-47 91-129 (215)
88 3i83_A 2-dehydropantoate 2-red 46.0 26 0.00089 32.6 5.5 41 10-56 2-42 (320)
89 1v5e_A Pyruvate oxidase; oxido 45.7 91 0.0031 31.7 10.0 65 342-411 68-151 (590)
90 3hn2_A 2-dehydropantoate 2-red 45.3 30 0.001 32.0 5.8 41 10-56 2-42 (312)
91 2gt1_A Lipopolysaccharide hept 45.0 21 0.00072 33.1 4.7 46 11-56 1-48 (326)
92 3hwr_A 2-dehydropantoate 2-red 44.9 21 0.00073 33.2 4.7 41 10-55 19-59 (318)
93 3llv_A Exopolyphosphatase-rela 44.7 12 0.00041 29.8 2.6 32 10-46 6-37 (141)
94 3ghy_A Ketopantoate reductase 44.4 18 0.00062 33.9 4.2 33 10-47 3-35 (335)
95 3lqk_A Dipicolinate synthase s 44.3 28 0.00097 30.1 5.0 39 10-49 7-46 (201)
96 3oow_A Phosphoribosylaminoimid 44.1 1.4E+02 0.0047 24.8 9.4 140 267-434 6-157 (166)
97 2hy7_A Glucuronosyltransferase 44.0 14 0.00049 35.6 3.5 36 10-47 14-52 (406)
98 3mcu_A Dipicolinate synthase, 43.1 24 0.00082 30.7 4.4 40 10-50 5-45 (207)
99 3l6d_A Putative oxidoreductase 42.9 14 0.00049 34.2 3.1 38 4-46 3-40 (306)
100 4hb9_A Similarities with proba 41.7 16 0.00055 34.8 3.4 29 11-44 2-30 (412)
101 1vgv_A UDP-N-acetylglucosamine 41.7 24 0.00082 33.2 4.7 35 11-46 1-36 (384)
102 2gk4_A Conserved hypothetical 41.5 29 0.001 30.7 4.7 26 21-48 28-53 (232)
103 1v4v_A UDP-N-acetylglucosamine 41.5 28 0.00096 32.7 5.1 38 10-48 5-43 (376)
104 4g6h_A Rotenone-insensitive NA 40.9 14 0.00048 37.0 2.9 36 8-48 40-75 (502)
105 4b4k_A N5-carboxyaminoimidazol 40.4 1.6E+02 0.0056 24.7 11.1 86 266-373 22-111 (181)
106 3fwz_A Inner membrane protein 39.9 14 0.00049 29.5 2.3 33 10-47 7-39 (140)
107 1z82_A Glycerol-3-phosphate de 39.0 20 0.0007 33.5 3.6 33 10-47 14-46 (335)
108 1p3y_1 MRSD protein; flavoprot 38.5 20 0.0007 30.8 3.2 41 10-51 8-48 (194)
109 4dll_A 2-hydroxy-3-oxopropiona 38.1 34 0.0012 31.8 5.0 32 10-46 31-62 (320)
110 3dfu_A Uncharacterized protein 37.4 24 0.00083 31.3 3.6 32 10-46 6-37 (232)
111 4e5s_A MCCFLIKE protein (BA_56 37.1 43 0.0015 31.4 5.5 73 279-370 62-136 (331)
112 3s2u_A UDP-N-acetylglucosamine 36.8 85 0.0029 29.5 7.7 27 340-368 92-121 (365)
113 2ew2_A 2-dehydropantoate 2-red 35.4 24 0.00083 32.3 3.4 32 10-46 3-34 (316)
114 1pjq_A CYSG, siroheme synthase 35.4 3.2E+02 0.011 26.6 11.8 148 266-434 13-169 (457)
115 2qyt_A 2-dehydropantoate 2-red 34.7 22 0.00076 32.7 3.1 32 10-46 8-45 (317)
116 1ks9_A KPA reductase;, 2-dehyd 34.6 26 0.00088 31.7 3.4 31 11-46 1-31 (291)
117 1bg6_A N-(1-D-carboxylethyl)-L 34.6 26 0.0009 32.9 3.6 32 10-46 4-35 (359)
118 3ecs_A Translation initiation 34.0 52 0.0018 30.6 5.3 18 100-117 215-232 (315)
119 4gbj_A 6-phosphogluconate dehy 33.8 37 0.0013 31.2 4.4 29 12-45 7-35 (297)
120 3g0o_A 3-hydroxyisobutyrate de 33.6 25 0.00084 32.4 3.1 32 10-46 7-38 (303)
121 2hmt_A YUAA protein; RCK, KTN, 33.2 20 0.00069 28.2 2.2 32 10-46 6-37 (144)
122 4eg0_A D-alanine--D-alanine li 33.1 50 0.0017 30.4 5.3 38 10-47 13-54 (317)
123 1u0t_A Inorganic polyphosphate 33.0 55 0.0019 30.2 5.5 32 337-370 72-107 (307)
124 3l7i_A Teichoic acid biosynthe 32.9 53 0.0018 34.4 6.0 114 329-454 604-721 (729)
125 1qzu_A Hypothetical protein MD 32.7 36 0.0012 29.5 3.8 43 10-53 19-62 (206)
126 4e3z_A Putative oxidoreductase 32.5 47 0.0016 29.7 4.8 34 10-46 25-58 (272)
127 3oy2_A Glycosyltransferase B73 32.3 40 0.0014 32.0 4.6 37 11-48 1-40 (413)
128 1txg_A Glycerol-3-phosphate de 32.3 35 0.0012 31.6 4.1 31 11-46 1-31 (335)
129 1g63_A Epidermin modifying enz 32.1 39 0.0013 28.6 3.9 39 11-50 3-41 (181)
130 3kjh_A CO dehydrogenase/acetyl 32.1 32 0.0011 30.1 3.6 38 11-48 1-38 (254)
131 3ego_A Probable 2-dehydropanto 32.0 48 0.0016 30.5 4.9 41 10-56 2-43 (307)
132 3afo_A NADH kinase POS5; alpha 31.5 89 0.0031 30.0 6.7 36 333-370 107-147 (388)
133 3eag_A UDP-N-acetylmuramate:L- 31.0 44 0.0015 31.1 4.5 33 10-46 4-36 (326)
134 4h1h_A LMO1638 protein; MCCF-l 31.0 62 0.0021 30.2 5.5 73 279-370 62-136 (327)
135 3ia7_A CALG4; glycosysltransfe 31.0 1.1E+02 0.0036 28.7 7.4 34 268-303 7-40 (402)
136 1i36_A Conserved hypothetical 30.8 34 0.0012 30.5 3.6 31 11-46 1-31 (264)
137 2raf_A Putative dinucleotide-b 30.7 35 0.0012 29.4 3.4 32 10-46 19-50 (209)
138 2ehd_A Oxidoreductase, oxidore 30.4 55 0.0019 28.3 4.8 32 12-46 6-37 (234)
139 3tov_A Glycosyl transferase fa 30.4 28 0.00096 32.8 3.0 96 265-368 184-286 (349)
140 3sr3_A Microcin immunity prote 30.2 67 0.0023 30.1 5.6 73 279-370 63-137 (336)
141 2a33_A Hypothetical protein; s 30.2 1.5E+02 0.0051 25.7 7.4 44 327-370 94-147 (215)
142 3lyu_A Putative hydrogenase; t 29.9 34 0.0011 27.5 3.0 35 11-48 19-53 (142)
143 3obb_A Probable 3-hydroxyisobu 29.7 46 0.0016 30.6 4.3 31 11-46 4-34 (300)
144 1xmp_A PURE, phosphoribosylami 29.7 2.4E+02 0.0083 23.4 11.0 143 266-434 11-163 (170)
145 2dpo_A L-gulonate 3-dehydrogen 29.7 30 0.001 32.3 3.0 32 10-46 6-37 (319)
146 2gdz_A NAD+-dependent 15-hydro 29.5 67 0.0023 28.5 5.3 32 12-46 8-39 (267)
147 3hww_A 2-succinyl-5-enolpyruvy 29.2 2.2E+02 0.0075 28.5 9.7 66 343-411 72-156 (556)
148 1pno_A NAD(P) transhydrogenase 29.0 55 0.0019 27.2 4.0 36 11-48 24-64 (180)
149 3lp6_A Phosphoribosylaminoimid 28.9 2.5E+02 0.0087 23.4 11.0 139 267-433 8-156 (174)
150 1o4v_A Phosphoribosylaminoimid 28.8 2.6E+02 0.009 23.5 10.3 140 267-434 14-163 (183)
151 3l4b_C TRKA K+ channel protien 28.8 20 0.00067 31.2 1.5 31 11-46 1-31 (218)
152 2h78_A Hibadh, 3-hydroxyisobut 28.7 49 0.0017 30.2 4.3 32 10-46 3-34 (302)
153 1zl0_A Hypothetical protein PA 28.6 84 0.0029 29.1 5.8 75 278-371 63-139 (311)
154 1d4o_A NADP(H) transhydrogenas 28.4 57 0.002 27.2 4.0 35 12-48 24-63 (184)
155 3ew7_A LMO0794 protein; Q8Y8U8 28.4 42 0.0014 28.6 3.6 32 11-46 1-32 (221)
156 4grd_A N5-CAIR mutase, phospho 28.3 2.1E+02 0.0072 23.8 7.5 141 266-433 12-163 (173)
157 2l82_A Designed protein OR32; 28.3 1E+02 0.0035 23.3 5.1 34 268-305 3-36 (162)
158 3doj_A AT3G25530, dehydrogenas 28.3 41 0.0014 31.0 3.7 32 10-46 21-52 (310)
159 1ozh_A ALS, acetolactate synth 28.2 3.2E+02 0.011 27.3 10.8 65 343-412 74-157 (566)
160 1w2w_B 5-methylthioribose-1-ph 27.8 35 0.0012 29.2 2.8 71 30-117 22-94 (191)
161 1q6z_A BFD, BFDC, benzoylforma 27.8 1.4E+02 0.0046 29.8 7.8 64 343-411 64-147 (528)
162 1yb4_A Tartronic semialdehyde 27.4 42 0.0014 30.4 3.6 31 10-45 3-33 (295)
163 2khz_A C-MYC-responsive protei 27.3 2.1E+02 0.0072 23.4 7.6 126 266-412 11-150 (165)
164 2q28_A Oxalyl-COA decarboxylas 26.9 2.7E+02 0.0093 27.8 9.9 65 344-413 72-157 (564)
165 2fsv_C NAD(P) transhydrogenase 26.8 62 0.0021 27.5 4.0 36 11-48 47-87 (203)
166 3lk7_A UDP-N-acetylmuramoylala 26.8 1.3E+02 0.0046 29.2 7.4 32 10-46 9-40 (451)
167 3lyh_A Cobalamin (vitamin B12) 26.6 1.2E+02 0.004 23.5 5.6 37 266-302 6-42 (126)
168 4dzz_A Plasmid partitioning pr 26.5 79 0.0027 26.5 5.0 36 12-47 2-39 (206)
169 1f0y_A HCDH, L-3-hydroxyacyl-C 26.4 43 0.0015 30.7 3.4 33 10-47 15-47 (302)
170 2a0u_A Initiation factor 2B; S 26.4 84 0.0029 30.1 5.5 20 99-118 281-300 (383)
171 2yvk_A Methylthioribose-1-phos 26.4 80 0.0027 30.1 5.3 20 99-118 277-296 (374)
172 3qha_A Putative oxidoreductase 26.4 37 0.0013 31.1 3.0 32 10-46 15-46 (296)
173 3kkl_A Probable chaperone prot 26.4 1E+02 0.0035 27.3 5.8 39 10-48 3-52 (244)
174 3a11_A Translation initiation 26.3 58 0.002 30.6 4.3 19 99-117 234-252 (338)
175 3gpi_A NAD-dependent epimerase 26.2 33 0.0011 30.8 2.6 32 10-46 3-34 (286)
176 3bul_A Methionine synthase; tr 26.2 87 0.003 31.8 5.8 43 10-52 98-140 (579)
177 1djl_A Transhydrogenase DIII; 26.1 64 0.0022 27.5 4.0 36 11-48 46-86 (207)
178 1ybh_A Acetolactate synthase, 26.0 2.5E+02 0.0085 28.4 9.5 64 343-411 76-158 (590)
179 3dtt_A NADP oxidoreductase; st 26.0 51 0.0018 29.1 3.8 32 10-46 19-50 (245)
180 1jay_A Coenzyme F420H2:NADP+ o 25.9 48 0.0016 28.3 3.5 31 11-46 1-32 (212)
181 3h2s_A Putative NADH-flavin re 25.7 50 0.0017 28.2 3.6 32 11-46 1-32 (224)
182 1ydh_A AT5G11950; structural g 25.5 49 0.0017 28.9 3.4 42 328-370 91-143 (216)
183 3k96_A Glycerol-3-phosphate de 25.5 38 0.0013 32.1 2.9 33 10-47 29-61 (356)
184 4e12_A Diketoreductase; oxidor 25.3 56 0.0019 29.6 4.0 32 10-46 4-35 (283)
185 3klj_A NAD(FAD)-dependent dehy 25.3 31 0.0011 33.0 2.3 42 1-48 1-42 (385)
186 3tl4_X Glutaminyl-tRNA synthet 25.2 35 0.0012 29.1 2.3 61 383-451 109-177 (187)
187 3n7t_A Macrophage binding prot 25.1 1.5E+02 0.0053 26.2 6.8 39 10-48 9-58 (247)
188 3mc3_A DSRE/DSRF-like family p 25.0 96 0.0033 24.5 4.9 38 11-48 16-56 (134)
189 2ag5_A DHRS6, dehydrogenase/re 24.9 93 0.0032 27.2 5.3 32 12-46 7-38 (246)
190 1mv8_A GMD, GDP-mannose 6-dehy 24.9 65 0.0022 31.4 4.6 31 11-46 1-31 (436)
191 3pef_A 6-phosphogluconate dehy 24.9 48 0.0016 30.0 3.4 31 11-46 2-32 (287)
192 1hdo_A Biliverdin IX beta redu 24.8 1E+02 0.0035 25.5 5.5 32 11-46 4-35 (206)
193 2qx0_A 7,8-dihydro-6-hydroxyme 24.6 1.1E+02 0.0036 25.3 5.1 28 268-295 3-30 (159)
194 3ius_A Uncharacterized conserv 24.6 1.1E+02 0.0037 27.2 5.9 34 10-48 5-38 (286)
195 1t9k_A Probable methylthioribo 24.4 86 0.0029 29.6 5.1 20 99-118 252-271 (347)
196 4e5v_A Putative THUA-like prot 24.3 81 0.0028 28.7 4.8 38 9-47 3-43 (281)
197 1p9o_A Phosphopantothenoylcyst 24.3 43 0.0015 31.1 2.9 25 22-48 65-89 (313)
198 3ic5_A Putative saccharopine d 24.2 44 0.0015 25.0 2.6 32 10-46 5-37 (118)
199 2f62_A Nucleoside 2-deoxyribos 24.2 2.8E+02 0.0096 22.7 7.7 86 267-370 11-106 (161)
200 1t9b_A Acetolactate synthase, 24.1 4.7E+02 0.016 26.9 11.2 65 343-412 146-229 (677)
201 2bru_C NAD(P) transhydrogenase 24.0 63 0.0021 27.0 3.5 36 11-48 31-71 (186)
202 2i2c_A Probable inorganic poly 23.9 37 0.0013 30.8 2.4 52 341-413 36-93 (272)
203 2vo1_A CTP synthase 1; pyrimid 23.9 90 0.0031 28.3 4.7 40 10-49 22-64 (295)
204 1rpn_A GDP-mannose 4,6-dehydra 23.9 84 0.0029 28.7 5.0 35 8-46 12-46 (335)
205 2xdo_A TETX2 protein; tetracyc 23.6 57 0.002 31.0 3.9 31 10-45 26-56 (398)
206 2r85_A PURP protein PF1517; AT 23.6 69 0.0024 29.4 4.4 34 10-49 2-35 (334)
207 1t35_A Hypothetical protein YV 23.5 1.5E+02 0.005 25.2 6.0 103 253-370 22-135 (191)
208 1dhr_A Dihydropteridine reduct 23.5 84 0.0029 27.3 4.7 34 10-46 6-39 (241)
209 2x7j_A 2-succinyl-5-enolpyruvy 23.4 3E+02 0.01 27.9 9.5 66 342-412 94-185 (604)
210 4ezb_A Uncharacterized conserv 23.4 50 0.0017 30.6 3.3 32 10-46 24-56 (317)
211 3ors_A N5-carboxyaminoimidazol 23.4 2.5E+02 0.0087 23.1 7.1 138 267-433 4-154 (163)
212 2gf2_A Hibadh, 3-hydroxyisobut 23.4 51 0.0017 29.9 3.3 31 11-46 1-31 (296)
213 3g79_A NDP-N-acetyl-D-galactos 23.3 80 0.0027 31.3 4.9 33 10-47 18-52 (478)
214 1pzg_A LDH, lactate dehydrogen 23.2 52 0.0018 30.8 3.4 33 10-47 9-42 (331)
215 3cky_A 2-hydroxymethyl glutara 23.0 73 0.0025 28.9 4.3 32 10-46 4-35 (301)
216 1f9y_A HPPK, protein (6-hydrox 22.9 93 0.0032 25.6 4.4 28 268-295 2-29 (158)
217 1j9j_A Stationary phase surviV 22.8 80 0.0027 28.2 4.3 23 27-50 16-38 (247)
218 2c31_A Oxalyl-COA decarboxylas 22.7 3.2E+02 0.011 27.3 9.5 64 344-412 74-158 (568)
219 2qv5_A AGR_C_5032P, uncharacte 22.7 4E+02 0.014 23.7 9.0 105 255-411 115-231 (261)
220 2qs7_A Uncharacterized protein 22.5 1.1E+02 0.0039 24.5 4.9 39 12-50 10-48 (144)
221 3kkj_A Amine oxidase, flavin-c 22.4 44 0.0015 28.9 2.6 28 12-44 4-31 (336)
222 3dqp_A Oxidoreductase YLBE; al 22.4 55 0.0019 28.0 3.2 32 11-46 1-32 (219)
223 3kuu_A Phosphoribosylaminoimid 22.3 2.8E+02 0.0095 23.1 7.1 141 267-434 13-164 (174)
224 3trh_A Phosphoribosylaminoimid 22.2 2.3E+02 0.0079 23.5 6.6 139 267-432 7-156 (169)
225 2vsy_A XCC0866; transferase, g 22.1 91 0.0031 31.1 5.2 39 9-47 204-246 (568)
226 3sxp_A ADP-L-glycero-D-mannohe 22.0 77 0.0026 29.5 4.4 42 1-46 1-44 (362)
227 2fb6_A Conserved hypothetical 22.0 1E+02 0.0035 23.8 4.3 41 10-50 7-51 (117)
228 3c24_A Putative oxidoreductase 21.9 73 0.0025 28.8 4.1 31 11-46 12-43 (286)
229 3f67_A Putative dienelactone h 21.8 1.1E+02 0.0039 25.7 5.2 36 11-46 32-67 (241)
230 3gg2_A Sugar dehydrogenase, UD 21.8 60 0.002 31.9 3.6 33 10-47 2-34 (450)
231 3qsg_A NAD-binding phosphogluc 21.7 49 0.0017 30.6 2.8 32 10-46 24-56 (312)
232 2zyd_A 6-phosphogluconate dehy 21.7 41 0.0014 33.4 2.4 33 9-46 14-46 (480)
233 1qkk_A DCTD, C4-dicarboxylate 21.7 1.8E+02 0.0061 22.6 6.1 48 361-413 74-121 (155)
234 3s40_A Diacylglycerol kinase; 21.7 2.3E+02 0.0079 25.8 7.5 80 268-370 12-97 (304)
235 4g65_A TRK system potassium up 21.7 28 0.00097 34.4 1.2 39 10-55 3-41 (461)
236 3pdu_A 3-hydroxyisobutyrate de 21.7 58 0.002 29.5 3.3 31 11-46 2-32 (287)
237 3nrc_A Enoyl-[acyl-carrier-pro 21.4 1.3E+02 0.0045 26.8 5.7 41 11-54 26-68 (280)
238 3ado_A Lambda-crystallin; L-gu 21.3 47 0.0016 31.0 2.6 32 10-46 6-37 (319)
239 3guy_A Short-chain dehydrogena 21.3 70 0.0024 27.6 3.7 33 11-46 1-33 (230)
240 3dhn_A NAD-dependent epimerase 21.2 82 0.0028 26.9 4.1 33 11-47 5-37 (227)
241 1y56_B Sarcosine oxidase; dehy 21.2 48 0.0016 31.2 2.7 32 10-46 5-36 (382)
242 4fs3_A Enoyl-[acyl-carrier-pro 21.1 1E+02 0.0035 27.2 4.9 33 11-46 6-40 (256)
243 1yt5_A Inorganic polyphosphate 21.1 44 0.0015 30.0 2.3 54 340-414 41-97 (258)
244 1evy_A Glycerol-3-phosphate de 21.1 45 0.0015 31.5 2.5 31 12-47 17-47 (366)
245 3g17_A Similar to 2-dehydropan 21.0 27 0.00093 32.0 0.9 33 10-47 2-34 (294)
246 3i6i_A Putative leucoanthocyan 20.9 80 0.0027 29.2 4.2 35 10-48 10-44 (346)
247 2an1_A Putative kinase; struct 20.8 54 0.0019 29.9 2.9 32 337-370 60-95 (292)
248 3tjr_A Short chain dehydrogena 20.7 1.3E+02 0.0045 27.3 5.6 33 11-46 31-63 (301)
249 2y0c_A BCEC, UDP-glucose dehyd 20.7 62 0.0021 32.1 3.4 32 10-46 8-39 (478)
250 1cbk_A Protein (7,8-dihydro-6- 20.6 1E+02 0.0036 25.4 4.3 28 268-295 3-30 (160)
251 1g5t_A COB(I)alamin adenosyltr 20.6 3.5E+02 0.012 23.0 7.8 37 10-46 28-64 (196)
252 3c85_A Putative glutathione-re 20.6 44 0.0015 27.8 2.1 33 10-47 39-72 (183)
253 3qbc_A 2-amino-4-hydroxy-6-hyd 20.5 1.1E+02 0.0038 25.3 4.4 27 268-294 6-32 (161)
254 2pju_A Propionate catabolism o 20.5 44 0.0015 29.4 2.0 29 341-372 64-92 (225)
255 4e21_A 6-phosphogluconate dehy 20.4 59 0.002 30.8 3.1 32 10-46 22-53 (358)
256 1fy2_A Aspartyl dipeptidase; s 20.4 1.4E+02 0.0047 26.1 5.4 44 254-299 22-65 (229)
257 3czc_A RMPB; alpha/beta sandwi 20.3 1.1E+02 0.0037 23.2 4.1 46 1-46 4-56 (110)
258 3ea0_A ATPase, para family; al 20.1 90 0.0031 27.0 4.2 39 10-48 3-44 (245)
259 3ip0_A 2-amino-4-hydroxy-6-hyd 20.1 1.1E+02 0.0039 25.1 4.4 28 268-295 2-29 (158)
260 2pk3_A GDP-6-deoxy-D-LYXO-4-he 20.0 95 0.0033 28.1 4.5 34 10-46 11-44 (321)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=5.5e-70 Score=551.02 Aligned_cols=410 Identities=29% Similarity=0.502 Sum_probs=340.7
Q ss_pred CCCEEEEEcCCCCccHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCCc
Q 012342 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKG--FHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESPT 86 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~La~~L~~rG--h~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~~ 86 (465)
.++||+++|+|++||++||++||+.|+++| +.|||++++.+..++.+... ...++++|+.+|+++++..+....
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~----~~~~~i~~~~ipdglp~~~~~~~~ 87 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN----EFLPNIKYYNVHDGLPKGYVSSGN 87 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS----CCCTTEEEEECCCCCCTTCCCCSC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc----cCCCCceEEecCCCCCCCccccCC
Confidence 389999999999999999999999999999 99999999877766644311 113579999999988865211100
Q ss_pred ccC-CCC----------------------------CCccCchHHHHHHHcCCCeEEEcCCchhhhhhhhhhhhhhhc-Cc
Q 012342 87 AQD-AYS----------------------------LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEK-GL 136 (465)
Q Consensus 87 ~~~-~~~----------------------------~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-~~ 136 (465)
... +.. +|++++|+.++|+++|||++.|++++++.++.+++++.+... +.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~ 167 (454)
T 3hbf_A 88 PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGS 167 (454)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCC
Confidence 000 000 899999999999999999999999999999888876654332 11
Q ss_pred CCCCCcccccccccCcceeecCCCCCCccCcCCcccccCCCchhHHHHHHHHHHhhcccceeeecchhhhhHHHHHHHhc
Q 012342 137 FPVKDKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSF 216 (465)
Q Consensus 137 ~P~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~ 216 (465)
.+ ...+..+.++||+++++..+++.++.. .....+..++.+..+....++++++||+++||+++++++++
T Consensus 168 ~~---------~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~ 237 (454)
T 3hbf_A 168 KE---------VHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS 237 (454)
T ss_dssp HH---------HTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT
T ss_pred Cc---------cccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh
Confidence 00 011234556899999999999987653 33445566777777888899999999999999999999999
Q ss_pred cCCCceeeecccccccccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeeccccCCCHHHHHHHHHHHHhCCC
Q 012342 217 MFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNH 296 (465)
Q Consensus 217 ~~p~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~ 296 (465)
.+|+ +++|||++...+. ....+++++.+||+.++++++|||||||+...+.+++.+++.+|+++++
T Consensus 238 ~~~~-v~~vGPl~~~~~~-------------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~ 303 (454)
T 3hbf_A 238 KFKL-LLNVGPFNLTTPQ-------------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGF 303 (454)
T ss_dssp TSSC-EEECCCHHHHSCC-------------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCC
T ss_pred cCCC-EEEECCccccccc-------------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCC
Confidence 8876 9999999854321 0111356799999998889999999999998889999999999999999
Q ss_pred CEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhh
Q 012342 297 PFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPT 376 (465)
Q Consensus 297 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~ 376 (465)
+|||+++.... ..+|+++.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||+|++|+++||+.
T Consensus 304 ~flw~~~~~~~----~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~ 379 (454)
T 3hbf_A 304 PFIWSFRGDPK----EKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGL 379 (454)
T ss_dssp CEEEECCSCHH----HHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred eEEEEeCCcch----hcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHH
Confidence 99999986531 23778888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHH
Q 012342 377 NGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEIL 452 (465)
Q Consensus 377 na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 452 (465)
||+++++.+|+|+.+.. +.+++++|+++|+++|+++++++||+||+++++++++++++||||.+++++|++.+.
T Consensus 380 Na~~v~~~~g~Gv~l~~--~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 380 NTILTESVLEIGVGVDN--GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHHHTTSCSEEECGG--GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhCeeEEecC--CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 99999444899999987 789999999999999998767789999999999999999999999999999999884
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.4e-64 Score=518.83 Aligned_cols=438 Identities=51% Similarity=0.963 Sum_probs=330.6
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCC---CCCC-
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASS---DESP- 85 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~---~~~~- 85 (465)
++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+..........++++|+.+|++++... +...
T Consensus 8 ~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~~ 87 (482)
T 2pq6_A 8 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQD 87 (482)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CC
T ss_pred CCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcchh
Confidence 789999999999999999999999999999999999988876665431110001123799999987665420 0000
Q ss_pred ----------c--------cc-------CCCC----CCccCchHHHHHHHcCCCeEEEcCCchhhhhhhhhhhhhhhcCc
Q 012342 86 ----------T--------AQ-------DAYS----LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGL 136 (465)
Q Consensus 86 ----------~--------~~-------~~~~----~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 136 (465)
. .. +... +|.+++|+..+|+++|||++.++++++......++++.+...++
T Consensus 88 ~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 167 (482)
T 2pq6_A 88 VPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGI 167 (482)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCC
Confidence 0 00 0011 88888999999999999999999998887766666666656677
Q ss_pred CCCCCcccccccccCcceeecCCCCCCccCcCCcccccCCCchhHHHHHHHHHHhhcccceeeecchhhhhHHHHHHHhc
Q 012342 137 FPVKDKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSF 216 (465)
Q Consensus 137 ~P~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~ 216 (465)
.|........++.......++|+++.++..+++.++......+.+.+++....+...+++++|+|++++||+++++++++
T Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~~~ 247 (482)
T 2pq6_A 168 IPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSS 247 (482)
T ss_dssp SSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHHHT
T ss_pred CCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHHHH
Confidence 77653221111101223344677776677777765533222334445555566777889999999999999999999998
Q ss_pred cCCCceeeecccccc-cccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeeccccCCCHHHHHHHHHHHHhCC
Q 012342 217 MFPHHLFTIGPLQLL-LNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSN 295 (465)
Q Consensus 217 ~~p~~v~~vGpl~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~ 295 (465)
.+++ +++|||++.. +..... ........+.+..+.++.+|||.++++++|||||||+...+.+++.+++.+|++++
T Consensus 248 ~~~~-v~~VGPl~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 324 (482)
T 2pq6_A 248 TIPS-IYPIGPLPSLLKQTPQI--HQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCK 324 (482)
T ss_dssp TCTT-EEECCCHHHHHHTSTTG--GGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTT
T ss_pred hCCc-EEEEcCCcccccccccc--cccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 8855 9999999753 211000 00000001223345578999999888899999999998778888999999999999
Q ss_pred CCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChh
Q 012342 296 HPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQP 375 (465)
Q Consensus 296 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~ 375 (465)
.+|||+++.+...++...+++++.++.++|+++++|+||.++|.|+++++|||||||||++|++++|||+|++|++.||+
T Consensus 325 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 404 (482)
T 2pq6_A 325 KSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQP 404 (482)
T ss_dssp CEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred CcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchH
Confidence 99999998643222222377888888899999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHh
Q 012342 376 TNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILL 453 (465)
Q Consensus 376 ~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 453 (465)
.||+++++++|+|+.+. +.+++++|.++|+++|+|+++++||+||+++++++++++.+||||.+++++|++.+..
T Consensus 405 ~na~~~~~~~G~g~~l~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 405 TDCRFICNEWEIGMEID---TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHHHHHTSCCEEECC---SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCEEEEEC---CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 99999955799999996 5689999999999999988667799999999999999999999999999999998854
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=7.3e-61 Score=488.52 Aligned_cols=415 Identities=29% Similarity=0.534 Sum_probs=318.3
Q ss_pred CCCEEEEEcCCCCccHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCC---C
Q 012342 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKG--FHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSD---E 83 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~La~~L~~rG--h~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~---~ 83 (465)
.++||+++|+|++||++|+++||+.|++|| +.||+++++.+.+.+.+...+ ...++++|+.+++++++..+ .
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~---~~~~~i~~~~i~~glp~~~~~~~~ 82 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH---TMQCNIKSYDISDGVPEGYVFAGR 82 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC----------CTTEEEEECCCCCCTTCCCCCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc---cCCCceEEEeCCCCCCCcccccCC
Confidence 378999999999999999999999999996 556888887655554432110 01247999999887765410 0
Q ss_pred CC--------cc--------c------CCCC----CCccCchHHHHHHHcCCCeEEEcCCchhhhhhhhhhhhhhhc-Cc
Q 012342 84 SP--------TA--------Q------DAYS----LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEK-GL 136 (465)
Q Consensus 84 ~~--------~~--------~------~~~~----~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-~~ 136 (465)
.. .. . .... +|.++.|+..+|+++|||++.|+++++......++.+.+... ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (456)
T 2c1x_A 83 PQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGV 162 (456)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCS
T ss_pred hHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCC
Confidence 00 00 0 0000 888999999999999999999999988776655443332111 22
Q ss_pred CCCCCcccccccccCcceeecCCCCCCccCcCCcccccCCCchhHHHHHHHHHHhhcccceeeecchhhhhHHHHHHHhc
Q 012342 137 FPVKDKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSF 216 (465)
Q Consensus 137 ~P~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~ 216 (465)
.+... .....+.++|++++++..+++..+........+..++.+..+....++++++|++++||+++++++++
T Consensus 163 ~~~~~-------~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~ 235 (456)
T 2c1x_A 163 SGIQG-------REDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKS 235 (456)
T ss_dssp SCCTT-------CTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHH
T ss_pred ccccc-------ccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHh
Confidence 11100 01123334788887777777764432222223344455555666788999999999999999999998
Q ss_pred cCCCceeeecccccccccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeeccccCCCHHHHHHHHHHHHhCCC
Q 012342 217 MFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNH 296 (465)
Q Consensus 217 ~~p~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~ 296 (465)
.+|+ +++|||++...+. . .+..+.++.+||+.++++++|||+|||......+++.+++.+|+.++.
T Consensus 236 ~~~~-~~~vGpl~~~~~~---------~----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~ 301 (456)
T 2c1x_A 236 KLKT-YLNIGPFNLITPP---------P----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRV 301 (456)
T ss_dssp HSSC-EEECCCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTC
T ss_pred cCCC-EEEecCcccCccc---------c----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCC
Confidence 8876 9999999753221 0 011245689999998888999999999988788899999999999999
Q ss_pred CEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhh
Q 012342 297 PFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPT 376 (465)
Q Consensus 297 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~ 376 (465)
+|||+++.... ..+++++.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||+|++|++.||+.
T Consensus 302 ~~lw~~~~~~~----~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~ 377 (456)
T 2c1x_A 302 PFIWSLRDKAR----VHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRL 377 (456)
T ss_dssp CEEEECCGGGG----GGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred eEEEEECCcch----hhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHH
Confidence 99999986421 22677887778899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHh
Q 012342 377 NGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILL 453 (465)
Q Consensus 377 na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 453 (465)
||+++++.||+|+.+.. +.+++++|+++|+++|+|+++++||+||+++++++++++++||||.+++++|++.+..
T Consensus 378 Na~~l~~~~g~g~~l~~--~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 378 NGRMVEDVLEIGVRIEG--GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHHHHTSCCEEECGG--GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhCeEEEecC--CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 99999555599999987 7899999999999999988667799999999999999999999999999999999854
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=2.3e-60 Score=487.85 Aligned_cols=414 Identities=31% Similarity=0.486 Sum_probs=316.1
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhC-CCEEEEEeCCc--chHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCC-C
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK-GFHITFVNTEF--NHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDES-P 85 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~r-Gh~Vt~~t~~~--~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~-~ 85 (465)
++||+++|+|++||++|+++||++|++| ||+|||++++. +...+.+... ....+++|+.+|+......... .
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~----~~~~~i~~~~l~~~~~~~~~~~~~ 81 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD----SLPSSISSVFLPPVDLTDLSSSTR 81 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-----CCTTEEEEECCCCCCTTSCTTCC
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc----ccCCCceEEEcCCCCCCCCCCchh
Confidence 6899999999999999999999999998 99999999987 3444544211 0013799999986421110000 0
Q ss_pred ---------------------c-----cc-CCCCCCccCchHHHHHHHcCCCeEEEcCCchhhhhhhhhhhhhhhcCcCC
Q 012342 86 ---------------------T-----AQ-DAYSLDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFP 138 (465)
Q Consensus 86 ---------------------~-----~~-~~~~~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~P 138 (465)
. .. +.-.+|.++.|+..+|+++|||++.|+++++...+..++++........+
T Consensus 82 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (480)
T 2vch_A 82 IESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 161 (480)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCc
Confidence 0 00 11117788889999999999999999999988777766655443322222
Q ss_pred CCCcccccccccCcceeecCCCCCCccCcCCcccccCCCchhHHHHHHHHHHhhcccceeeecchhhhhHHHHHHHhcc-
Q 012342 139 VKDKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSFM- 217 (465)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~- 217 (465)
+.. .+... .+|++++++..+++..+... .......+........+++++++|++++||++.+..++..
T Consensus 162 ~~~--------~~~~~-~~Pg~~p~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~ 230 (480)
T 2vch_A 162 FRE--------LTEPL-MLPGCVPVAGKDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPG 230 (480)
T ss_dssp GGG--------CSSCB-CCTTCCCBCGGGSCGGGSCT--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCC
T ss_pred ccc--------cCCcc-cCCCCCCCChHHCchhhhcC--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcc
Confidence 110 01122 26787777777777654321 1123334444555667788999999999999988877642
Q ss_pred --CCCceeeecccccccccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeeccccCCCHHHHHHHHHHHHhCC
Q 012342 218 --FPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSN 295 (465)
Q Consensus 218 --~p~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~ 295 (465)
++ ++++|||++..... . ..+..++++.+||+.++++++|||||||+...+.+++.+++++|++++
T Consensus 231 ~~~~-~v~~vGpl~~~~~~----------~--~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~ 297 (480)
T 2vch_A 231 LDKP-PVYPVGPLVNIGKQ----------E--AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSE 297 (480)
T ss_dssp TTCC-CEEECCCCCCCSCS----------C--C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTT
T ss_pred cCCC-cEEEEecccccccc----------c--cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcC
Confidence 44 49999999753211 0 001234679999999888899999999998888999999999999999
Q ss_pred CCEEEEEcCCCCC-----------CC-cCCCchhHHHHhccCceEee-ccChhhhhcCCCcceeeecCCchhHHHHHhcC
Q 012342 296 HPFLWIIRPDLVT-----------GE-TADLPAEFEVKAKEKGFVAS-WCPQEEVLKHPSIGGFLTHCGWNSIVESLCSG 362 (465)
Q Consensus 296 ~~~l~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~v~~-~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~G 362 (465)
++|||+++..... .+ ...+|+++.++..++++++. |+||.+||+|+++++|||||||||++|++++|
T Consensus 298 ~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~G 377 (480)
T 2vch_A 298 QRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSG 377 (480)
T ss_dssp CEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHT
T ss_pred CcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcC
Confidence 9999999875321 11 12478888888777777776 99999999999999999999999999999999
Q ss_pred CcEEecCCCCChhhHHHhhcccceeEEEEecCCC---CCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCc
Q 012342 363 VPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDE---DVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGS 439 (465)
Q Consensus 363 vP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~---~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~ 439 (465)
||+|++|+++||+.||+++++++|+|+.+.. . .+++++|+++|+++|+++++++||+||+++++++++++.+||+
T Consensus 378 vP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~--~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGs 455 (480)
T 2vch_A 378 IPLIAWPLYAEQKMNAVLLSEDIRAALRPRA--GDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGT 455 (480)
T ss_dssp CCEEECCCSTTHHHHHHHHHHTTCCEECCCC--CTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSH
T ss_pred CCEEeccccccchHHHHHHHHHhCeEEEeec--ccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997578999999975 4 6999999999999998665667999999999999999999999
Q ss_pred hHHHHHHHHHHHHh
Q 012342 440 SSLNLDKLVNEILL 453 (465)
Q Consensus 440 ~~~~~~~~~~~~~~ 453 (465)
|..++++|++.+..
T Consensus 456 s~~~~~~~v~~~~~ 469 (480)
T 2vch_A 456 STKALSLVALKWKA 469 (480)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999876
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=8e-59 Score=474.65 Aligned_cols=406 Identities=29% Similarity=0.471 Sum_probs=312.0
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcch-----HHHHhhhcCCCCCCCCCeeEEeCCCC-CCCCC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNH-----RRLLKARGQHSLDGLPSFRFEAIPDG-LPASS 81 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~-----~~~~~~~~~~~~~~~~~i~f~~l~~~-~~~~~ 81 (465)
++||+++|+|++||++|+++||+.|++| ||+|||++++.+. +.+.+... ..++++|+.+|++ ++..
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~-----~~~~i~~~~lp~~~~~~~- 82 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLA-----SQPQIQLIDLPEVEPPPQ- 82 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHC-----SCTTEEEEECCCCCCCCG-
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhccc-----CCCCceEEECCCCCCCcc-
Confidence 6899999999999999999999999999 9999999998753 23333111 1237999999975 3321
Q ss_pred CCCCccc--------------------CC--CC-----CCccCchHHHHHHHcCCCeEEEcCCchhhhhhhhhhhhhhhc
Q 012342 82 DESPTAQ--------------------DA--YS-----LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEK 134 (465)
Q Consensus 82 ~~~~~~~--------------------~~--~~-----~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 134 (465)
+..... .+ .. +|.++.|+..+|+++|||++.++++++......++++.....
T Consensus 83 -~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (463)
T 2acv_A 83 -ELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE 161 (463)
T ss_dssp -GGGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT
T ss_pred -cccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc
Confidence 000000 00 01 888899999999999999999999988877766655433100
Q ss_pred CcCCCCCcccccccccCcceeecCCC-CCCccCcCCcccccCCCchhHHHHHHHHHHhhcccceeeecchhhhhHHHHHH
Q 012342 135 GLFPVKDKSCLTKEYLNSLIDWIPGM-KDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNA 213 (465)
Q Consensus 135 ~~~P~~~~~~~~~~~~~~~~~~~p~l-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~ 213 (465)
.++.... .......+|++ ++++..+++..+..+ ......+.........++++++|++++||++.++.
T Consensus 162 --~~~~~~~------~~~~~~~~pg~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~ 230 (463)
T 2acv_A 162 --EVFDDSD------RDHQLLNIPGISNQVPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDA 230 (463)
T ss_dssp --CCCCCSS------GGGCEECCTTCSSCEEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHH
T ss_pred --CCCCCcc------ccCceeECCCCCCCCChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHH
Confidence 1111000 00002236887 666666676544322 12334444455666788899999999999998887
Q ss_pred HhccC--CCceeeecccccccccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeecccc-CCCHHHHHHHHHH
Q 012342 214 LSFMF--PHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFI-FMNKQQLIEVAMG 290 (465)
Q Consensus 214 ~~~~~--p~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~a 290 (465)
++... ++++++|||++...... ... ..+..+.++.+||+.++++++|||+|||+. ..+.+++.+++.+
T Consensus 231 l~~~~~p~~~v~~vGpl~~~~~~~--------~~~-~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~ 301 (463)
T 2acv_A 231 LYDHDEKIPPIYAVGPLLDLKGQP--------NPK-LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALG 301 (463)
T ss_dssp HHHHCTTSCCEEECCCCCCSSCCC--------BTT-BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHH
T ss_pred HHhccccCCcEEEeCCCccccccc--------ccc-cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHH
Confidence 77644 44599999997532100 000 001235689999999888899999999998 7888899999999
Q ss_pred HHhCCCCEEEEEcCCCCCCCcCCCchhHHHHh--ccCceEeeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEec
Q 012342 291 LVNSNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICW 368 (465)
Q Consensus 291 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~ 368 (465)
|++++++|||+++.+. +.+++++.++. ++|+++++|+||.++|.|+++++|||||||||++|++++|||+|++
T Consensus 302 l~~~~~~~l~~~~~~~-----~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~ 376 (463)
T 2acv_A 302 LKHSGVRFLWSNSAEK-----KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTW 376 (463)
T ss_dssp HHHHTCEEEEECCCCG-----GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred HHhCCCcEEEEECCCc-----ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeec
Confidence 9999999999998640 12677887777 8899999999999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHhhcccceeEEEE-e---cCCC--CCCHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHhCCCCchH
Q 012342 369 PFTGDQPTNGRYVCNEWGVGMEI-N---GDDE--DVIRNEVEKLVREMME-GEKGKQMRNKAMEWKGLAEEAAAPHGSSS 441 (465)
Q Consensus 369 P~~~DQ~~na~~~~~~~g~g~~~-~---~~~~--~~~~~~l~~ai~~~l~-~~~~~~~~~~a~~l~~~~~~~~~~~g~~~ 441 (465)
|++.||+.||+++++++|+|+.+ . . + .+++++|.++|+++|+ +++ ||+||+++++++++++.+||||.
T Consensus 377 P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~--~~~~~~~~~l~~ai~~ll~~~~~---~r~~a~~l~~~~~~a~~~gGss~ 451 (463)
T 2acv_A 377 PIYAEQQLNAFRLVKEWGVGLGLRVDYRK--GSDVVAAEEIEKGLKDLMDKDSI---VHKKVQEMKEMSRNAVVDGGSSL 451 (463)
T ss_dssp CCSTTHHHHHHHHHHTSCCEEESCSSCCT--TCCCCCHHHHHHHHHHHTCTTCT---HHHHHHHHHHHHHHHTSTTSHHH
T ss_pred cchhhhHHHHHHHHHHcCeEEEEecccCC--CCccccHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHhcCCcHH
Confidence 99999999999954789999999 3 3 4 7899999999999997 355 99999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 012342 442 LNLDKLVNEIL 452 (465)
Q Consensus 442 ~~~~~~~~~~~ 452 (465)
+++++||+++.
T Consensus 452 ~~l~~~v~~~~ 462 (463)
T 2acv_A 452 ISVGKLIDDIT 462 (463)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.1e-42 Score=349.17 Aligned_cols=371 Identities=16% Similarity=0.143 Sum_probs=253.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCC-c
Q 012342 8 CSKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESP-T 86 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~-~ 86 (465)
++++||+|+++|++||++|+++||++|+++||+|+|++++.+.+.+++. +++|++++..++....... .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~ 79 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA----------GATPVVYDSILPKESNPEESW 79 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCEEEECCCCSCCTTCTTCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC----------CCEEEecCccccccccchhhc
Confidence 4478999999999999999999999999999999999999988888877 7899988876543200000 0
Q ss_pred ccC----------------------CC-------CCCccCchHHHHHHHcCCCeEEEcCCchhhhhhhhhhhhhhhcCcC
Q 012342 87 AQD----------------------AY-------SLDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLF 137 (465)
Q Consensus 87 ~~~----------------------~~-------~~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (465)
..+ +. .+|.++.|+..+|+++|||++.+++.+.........+... ..++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~-~~~~~ 158 (424)
T 2iya_A 80 PEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV-QDPTA 158 (424)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG-SCCCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc-ccccc
Confidence 000 00 0788888999999999999999987654221110000000 00000
Q ss_pred CCCCcccccccccCcceeecC-CCCCCccCcCCccccc-CCCchhHHHHHHH------HHHhhcccceeeecchhhhhHH
Q 012342 138 PVKDKSCLTKEYLNSLIDWIP-GMKDIRIRDLPSFIQS-TDPKDMMFNLCVE------ATENASKASAIIIHTFDALEQQ 209 (465)
Q Consensus 138 P~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~l~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~le~~ 209 (465)
... .....| +... . ..+...... .........++.+ ........+.++++++++++++
T Consensus 159 ~~~------------~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~ 224 (424)
T 2iya_A 159 DRG------------EEAAAPAGTGD-A-EEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK 224 (424)
T ss_dssp -----------------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT
T ss_pred ccc------------ccccccccccc-c-hhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC
Confidence 000 000000 0000 0 000000000 0000001111110 0011125678899999888875
Q ss_pred HHHHHhccCCCceeeecccccccccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeeccccCCCHHHHHHHHH
Q 012342 210 VLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAM 289 (465)
Q Consensus 210 ~~~~~~~~~p~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~ 289 (465)
. ..+++++++|||++.... +..+|++..+++++|||++||......+.+.++++
T Consensus 225 ~-----~~~~~~~~~vGp~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~ 278 (424)
T 2iya_A 225 G-----DTVGDNYTFVGPTYGDRS---------------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLS 278 (424)
T ss_dssp G-----GGCCTTEEECCCCCCCCG---------------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHH
T ss_pred c-----cCCCCCEEEeCCCCCCcc---------------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHH
Confidence 2 446667999999853211 12357766566789999999998666788899999
Q ss_pred HHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecC
Q 012342 290 GLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWP 369 (465)
Q Consensus 290 al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P 369 (465)
+++..+.+++|.++.... .+.+ ..+++|+.+.+|+||.++|+|+++ ||||||+||++|++++|||+|++|
T Consensus 279 al~~~~~~~~~~~g~~~~-------~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p 348 (424)
T 2iya_A 279 AVDGLDWHVVLSVGRFVD-------PADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVP 348 (424)
T ss_dssp HHTTCSSEEEEECCTTSC-------GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred HHhcCCcEEEEEECCcCC-------hHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEec
Confidence 999989999998875421 1111 124678999999999999999998 999999999999999999999999
Q ss_pred CCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHH
Q 012342 370 FTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVN 449 (465)
Q Consensus 370 ~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 449 (465)
...||+.||+++ +++|+|+.+.. +.++.++|.++|+++|+|++ ++++++++++++++ .+++.+.++.+.+
T Consensus 349 ~~~dQ~~na~~l-~~~g~g~~~~~--~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 418 (424)
T 2iya_A 349 QIAEQTMNAERI-VELGLGRHIPR--DQVTAEKLREAVLAVASDPG---VAERLAAVRQEIRE----AGGARAAADILEG 418 (424)
T ss_dssp CSHHHHHHHHHH-HHTTSEEECCG--GGCCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT----SCHHHHHHHHHHH
T ss_pred CccchHHHHHHH-HHCCCEEEcCc--CCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh----cCcHHHHHHHHHH
Confidence 999999999999 78999999976 67899999999999999887 99999999999884 3445454444433
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2.9e-40 Score=331.75 Aligned_cols=156 Identities=19% Similarity=0.302 Sum_probs=130.0
Q ss_pred hhhhcccCCCCceeEEeeccccCCC--HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccC
Q 012342 256 CLQWLDCKEPKSVIYVNFGSFIFMN--KQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCP 333 (465)
Q Consensus 256 l~~~l~~~~~~~~V~vs~GS~~~~~--~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p 333 (465)
+.+|++..+++++|||+|||+.... .+.+.++++++++.+.+++|..++..... . ..+++|+++.+|+|
T Consensus 227 ~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~----~-----~~~~~~v~~~~~~p 297 (400)
T 4amg_A 227 LPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLAL----L-----GELPANVRVVEWIP 297 (400)
T ss_dssp CCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCC----C-----CCCCTTEEEECCCC
T ss_pred CcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccc----c-----ccCCCCEEEEeecC
Confidence 4568888888999999999986443 35688899999999999999987653211 1 12478999999999
Q ss_pred hhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcC
Q 012342 334 QEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEG 413 (465)
Q Consensus 334 ~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~ 413 (465)
|.++|+|+++ ||||||+||++|++++|||+|++|++.||+.||+++ ++.|+|+.+.. .+++++ +|+++|+|
T Consensus 298 ~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v-~~~G~g~~l~~--~~~~~~----al~~lL~d 368 (400)
T 4amg_A 298 LGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL-TGLGIGFDAEA--GSLGAE----QCRRLLDD 368 (400)
T ss_dssp HHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHH-HHHTSEEECCT--TTCSHH----HHHHHHHC
T ss_pred HHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHH-HHCCCEEEcCC--CCchHH----HHHHHHcC
Confidence 9999999998 999999999999999999999999999999999999 78999999987 666655 56678888
Q ss_pred ChHHHHHHHHHHHHHHHHH
Q 012342 414 EKGKQMRNKAMEWKGLAEE 432 (465)
Q Consensus 414 ~~~~~~~~~a~~l~~~~~~ 432 (465)
++ ||+||+++++++++
T Consensus 369 ~~---~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 369 AG---LREAALRVRQEMSE 384 (400)
T ss_dssp HH---HHHHHHHHHHHHHT
T ss_pred HH---HHHHHHHHHHHHHc
Confidence 87 99999999999985
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8e-40 Score=330.56 Aligned_cols=358 Identities=13% Similarity=0.102 Sum_probs=239.0
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCC--c--
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESP--T-- 86 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~--~-- 86 (465)
|||+|+++|+.||++|+++||++|++|||+|||++++.+.+.+.+. +++|+.++........... .
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~----------g~~~~~i~~~~~~~~~~~~~~~~~ 70 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV----------GVPHVPVGPSARAPIQRAKPLTAE 70 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCCEEECCC-------CCSCCCHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc----------CCeeeeCCCCHHHHhhcccccchH
Confidence 5999999999999999999999999999999999998887777765 7888888754321100000 0
Q ss_pred -------------ccCC----CC-----CCc-cCch--HHHHHHHcCCCeEEEcCCchhhhhhhhhhhhhhhcCcCCCCC
Q 012342 87 -------------AQDA----YS-----LDG-FLPF--TITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPVKD 141 (465)
Q Consensus 87 -------------~~~~----~~-----~D~-~~~~--~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 141 (465)
...+ .. +|. +..| +..+|+++|||++.+++.++.... .+.|...
T Consensus 71 ~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~~p~~~ 139 (415)
T 1iir_A 71 DVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PYYPPPP 139 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cccCCcc
Confidence 0000 00 465 5567 788999999999998876533211 1111100
Q ss_pred cccccccccCcceeecCCCCCCccCcCCcccccCCCchhHHHHHHHHH------------HhhcccceeeecchhhhhH-
Q 012342 142 KSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEAT------------ENASKASAIIIHTFDALEQ- 208 (465)
Q Consensus 142 ~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~~~le~- 208 (465)
. .+. +|+ ....+.+...+............+.... +..... .+++++++++++
T Consensus 140 ~----------~~~-~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~ 205 (415)
T 1iir_A 140 L----------GEP-STQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPL 205 (415)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCC
T ss_pred C----------Ccc-ccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCC
Confidence 0 000 100 0000000000000000000000000010 111122 678999888876
Q ss_pred HHHHHHhccCCCceeeecccccccccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeeccccCCCHHHHHHHH
Q 012342 209 QVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVA 288 (465)
Q Consensus 209 ~~~~~~~~~~p~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~ 288 (465)
+ ++.+ ++++|||+..... +..+.++.+||+..+ ++|||++||.. ...+.+..++
T Consensus 206 ~-----~~~~--~~~~vG~~~~~~~----------------~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~ 259 (415)
T 1iir_A 206 Q-----PTDL--DAVQTGAWILPDE----------------RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAI 259 (415)
T ss_dssp C-----CCSS--CCEECCCCCCCCC----------------CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHH
T ss_pred C-----cccC--CeEeeCCCccCcc----------------cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHH
Confidence 3 2333 4999999874321 113456889998653 69999999987 5677888899
Q ss_pred HHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEec
Q 012342 289 MGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICW 368 (465)
Q Consensus 289 ~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~ 368 (465)
+++++.+.+++|+++..... . ...++|+.+.+|+||.++|+++++ ||||||+||++|++++|||+|++
T Consensus 260 ~al~~~~~~~v~~~g~~~~~-----~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~ 327 (415)
T 1iir_A 260 DAIRAHGRRVILSRGWADLV-----L-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILL 327 (415)
T ss_dssp HHHHHTTCCEEECTTCTTCC-----C-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHHCCCeEEEEeCCCccc-----c-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEEC
Confidence 99999999999998765311 1 123568999999999999988888 99999999999999999999999
Q ss_pred CCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHH
Q 012342 369 PFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLV 448 (465)
Q Consensus 369 P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 448 (465)
|+..||+.||+++ +++|+|+.+.. +.++.++|.++|+++ +|++ |+++++++++++++ .+ ....+.+.+
T Consensus 328 p~~~dQ~~na~~l-~~~g~g~~~~~--~~~~~~~l~~~i~~l-~~~~---~~~~~~~~~~~~~~----~~-~~~~~~~~i 395 (415)
T 1iir_A 328 PQMADQPYYAGRV-AELGVGVAHDG--PIPTFDSLSAALATA-LTPE---THARATAVAGTIRT----DG-AAVAARLLL 395 (415)
T ss_dssp CCSTTHHHHHHHH-HHHTSEEECSS--SSCCHHHHHHHHHHH-TSHH---HHHHHHHHHHHSCS----CH-HHHHHHHHH
T ss_pred CCCCccHHHHHHH-HHCCCcccCCc--CCCCHHHHHHHHHHH-cCHH---HHHHHHHHHHHHhh----cC-hHHHHHHHH
Confidence 9999999999999 88999999976 778999999999999 8876 99999999988762 23 333444555
Q ss_pred HHHHh
Q 012342 449 NEILL 453 (465)
Q Consensus 449 ~~~~~ 453 (465)
+.+..
T Consensus 396 ~~~~~ 400 (415)
T 1iir_A 396 DAVSR 400 (415)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 55544
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.4e-38 Score=321.51 Aligned_cols=361 Identities=13% Similarity=0.082 Sum_probs=242.0
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCC----CCc
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDE----SPT 86 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~----~~~ 86 (465)
|||+++++++.||++|+++||++|+++||+|+|++++.+.+.+++. +++|+.++......... ...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~----------g~~~~~~~~~~~~~~~~~~~~~~~ 70 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV----------GVPHVPVGLPQHMMLQEGMPPPPP 70 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCCEEECSCCGGGCCCTTSCCCCH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc----------CCeeeecCCCHHHHHhhccccchh
Confidence 5999999999999999999999999999999999998888778776 78888887543211000 000
Q ss_pred --ccC------------C----CC-----CCc-cCch--HHHHHHHcCCCeEEEcCCchhhhhhhhhhhhhhhcCcCCCC
Q 012342 87 --AQD------------A----YS-----LDG-FLPF--TITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPVK 140 (465)
Q Consensus 87 --~~~------------~----~~-----~D~-~~~~--~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 140 (465)
... + .. +|. +.++ +..+|+.+|||++.+.+.+..... .+.| .
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~-----------~~~p-~ 138 (416)
T 1rrv_A 71 EEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-----------PHLP-P 138 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------cccC-C
Confidence 000 0 00 454 3345 678899999999988766432211 0111 0
Q ss_pred CcccccccccCcceeecCC-CCCCccCcCCcccccCCCchhHHHHHHH--------HHHhhcccceeeecchhhhhHHHH
Q 012342 141 DKSCLTKEYLNSLIDWIPG-MKDIRIRDLPSFIQSTDPKDMMFNLCVE--------ATENASKASAIIIHTFDALEQQVL 211 (465)
Q Consensus 141 ~~~~~~~~~~~~~~~~~p~-l~~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~~le~~~~ 211 (465)
.. .+...++ +.+.....+...............+... ..+..... +++++++++++++
T Consensus 139 ~~----------~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-- 205 (416)
T 1rrv_A 139 AY----------DEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-- 205 (416)
T ss_dssp CB----------CSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC--
T ss_pred CC----------CCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC--
Confidence 00 0000011 0000000000000000000000000000 01112233 6889998888764
Q ss_pred HHHhccCCCceeeecccccccccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeeccccC-CCHHHHHHHHHH
Q 012342 212 NALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIF-MNKQQLIEVAMG 290 (465)
Q Consensus 212 ~~~~~~~p~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~a 290 (465)
++.+ ++++|||+..... +..+.++.+||+..+ ++|||++||... ...+.+.+++++
T Consensus 206 ---~~~~--~~~~vG~~~~~~~----------------~~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~~a 262 (416)
T 1rrv_A 206 ---QPDV--DAVQTGAWLLSDE----------------RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEA 262 (416)
T ss_dssp ---CSSC--CCEECCCCCCCCC----------------CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHH
T ss_pred ---CCCC--CeeeECCCccCcc----------------CCCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHHHHH
Confidence 1223 4999999874321 113456888997653 699999999864 345678889999
Q ss_pred HHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCC
Q 012342 291 LVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPF 370 (465)
Q Consensus 291 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~ 370 (465)
++..+.+++|+++..... . ...++|+.+.+|+||.++|+++++ ||||||+||++|++++|||+|++|+
T Consensus 263 l~~~~~~~v~~~g~~~~~-----~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~ 330 (416)
T 1rrv_A 263 IRAQGRRVILSRGWTELV-----L-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPR 330 (416)
T ss_dssp HHHTTCCEEEECTTTTCC-----C-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHCCCeEEEEeCCcccc-----c-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccC
Confidence 999999999998865311 1 124678999999999999988888 9999999999999999999999999
Q ss_pred CCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHH
Q 012342 371 TGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNE 450 (465)
Q Consensus 371 ~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 450 (465)
..||+.||+++ ++.|+|+.+.. +.++.++|.++|+++ +|++ |+++++++++++++ .++. +.++.+++.
T Consensus 331 ~~dQ~~na~~l-~~~g~g~~~~~--~~~~~~~l~~~i~~l-~~~~---~~~~~~~~~~~~~~----~~~~-~~~~~i~e~ 398 (416)
T 1rrv_A 331 NTDQPYFAGRV-AALGIGVAHDG--PTPTFESLSAALTTV-LAPE---TRARAEAVAGMVLT----DGAA-AAADLVLAA 398 (416)
T ss_dssp SBTHHHHHHHH-HHHTSEEECSS--SCCCHHHHHHHHHHH-TSHH---HHHHHHHHTTTCCC----CHHH-HHHHHHHHH
T ss_pred CCCcHHHHHHH-HHCCCccCCCC--CCCCHHHHHHHHHHh-hCHH---HHHHHHHHHHHHhh----cCcH-HHHHHHHHH
Confidence 99999999999 78999999976 678999999999999 8877 99999999888773 3334 444444255
Q ss_pred HHh
Q 012342 451 ILL 453 (465)
Q Consensus 451 ~~~ 453 (465)
+..
T Consensus 399 ~~~ 401 (416)
T 1rrv_A 399 VGR 401 (416)
T ss_dssp HHC
T ss_pred Hhc
Confidence 544
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=3.6e-37 Score=309.93 Aligned_cols=350 Identities=14% Similarity=0.146 Sum_probs=234.8
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCC-CcccC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDES-PTAQD 89 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~-~~~~~ 89 (465)
|||+|++.++.||++|++.||++|.++||+|+|++++.+.+.+++. +++|..++.......... .....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~----------g~~~~~l~~~~~~~~~~~~~~~~~ 70 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV----------GVPMVPVGRAVRAGAREPGELPPG 70 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT----------TCCEEECSSCSSGGGSCTTCCCTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc----------CCceeecCCCHHHHhccccCCHHH
Confidence 5899999999999999999999999999999999999988888876 788888874432110000 00000
Q ss_pred CC-------------------CCCc-----cCchH---HHHHHHcCCCeEEEcCCchhhhhhhhhh-hhhhhcCcCCCCC
Q 012342 90 AY-------------------SLDG-----FLPFT---ITAAQQLGLPIVLFFTISACSFMGFKQF-QTFKEKGLFPVKD 141 (465)
Q Consensus 90 ~~-------------------~~D~-----~~~~~---~~vA~~lgiP~v~~~~~~~~~~~~~~~~-~~~~~~~~~P~~~ 141 (465)
+. ..|. ...++ ..+|+++|||++.++.++.......+.. +......
T Consensus 71 ~~~~~~~~~~~~~~~l~~~~~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~------ 144 (404)
T 3h4t_A 71 AAEVVTEVVAEWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQG------ 144 (404)
T ss_dssp CGGGHHHHHHHHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHH------
Confidence 00 0333 22333 6789999999998877654221110000 0000000
Q ss_pred cccccccccCcceeecCC-CCCCc-cCcCCcccccCCCchhHHHHHHHHHHhhcccceeeecchhhhhHHHHHHHhccCC
Q 012342 142 KSCLTKEYLNSLIDWIPG-MKDIR-IRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSFMFP 219 (465)
Q Consensus 142 ~~~~~~~~~~~~~~~~p~-l~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~~p 219 (465)
....+.. +...+ ...++ ...... .. ...+..+.+..+.+.+. +.++
T Consensus 145 -----------~~~~~~~~~~~~~~~lgl~-------~~~~~~-------~~-~~~~~~l~~~~~~l~p~------~~~~ 192 (404)
T 3h4t_A 145 -----------ADRLFGDAVNSHRASIGLP-------PVEHLY-------DY-GYTDQPWLAADPVLSPL------RPTD 192 (404)
T ss_dssp -----------HHHHHHHHHHHHHHHTTCC-------CCCCHH-------HH-HHCSSCEECSCTTTSCC------CTTC
T ss_pred -----------HHHHhHHHHHHHHHHcCCC-------CCcchh-------hc-cccCCeEEeeCcceeCC------CCCC
Confidence 0000000 00000 00000 000000 00 01223344554444332 2345
Q ss_pred CceeeecccccccccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeeccccCCCHHHHHHHHHHHHhCCCCEE
Q 012342 220 HHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFL 299 (465)
Q Consensus 220 ~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l 299 (465)
.+++++|+++.+... ..++++.+|++.. +++|||+|||+.. ..+.+..+++++++.+.++|
T Consensus 193 ~~~~~~G~~~~~~~~----------------~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv 253 (404)
T 3h4t_A 193 LGTVQTGAWILPDQR----------------PLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVV 253 (404)
T ss_dssp CSCCBCCCCCCCCCC----------------CCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEE
T ss_pred CCeEEeCccccCCCC----------------CCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEE
Confidence 568999988643211 1345688898753 4699999999986 66788889999999999999
Q ss_pred EEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHH
Q 012342 300 WIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGR 379 (465)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~ 379 (465)
|++++..... . ..++|+++.+|+||.++|+++++ ||||||+||+.|++++|||+|++|+..||+.||+
T Consensus 254 ~~~g~~~~~~----~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~ 321 (404)
T 3h4t_A 254 LSSGWAGLGR----I------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAG 321 (404)
T ss_dssp EECTTTTCCC----S------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred EEeCCccccc----c------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHH
Confidence 9988653210 1 12678999999999999999988 9999999999999999999999999999999999
Q ss_pred hhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 012342 380 YVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEI 451 (465)
Q Consensus 380 ~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 451 (465)
++ ++.|+|+.+.. ++++.++|.++|+++|+ ++ |+++++++++.++ . .+.++.++.+.+.+
T Consensus 322 ~~-~~~G~g~~l~~--~~~~~~~l~~ai~~ll~-~~---~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~ 381 (404)
T 3h4t_A 322 RV-ADLGVGVAHDG--PTPTVESLSAALATALT-PG---IRARAAAVAGTIR----T-DGTTVAAKLLLEAI 381 (404)
T ss_dssp HH-HHHTSEEECSS--SSCCHHHHHHHHHHHTS-HH---HHHHHHHHHTTCC----C-CHHHHHHHHHHHHH
T ss_pred HH-HHCCCEeccCc--CCCCHHHHHHHHHHHhC-HH---HHHHHHHHHHHHh----h-hHHHHHHHHHHHHH
Confidence 99 88999999987 78899999999999998 76 9999999998876 3 33444444444433
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=4.5e-36 Score=302.84 Aligned_cols=352 Identities=14% Similarity=0.149 Sum_probs=246.5
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCC----
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESP---- 85 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~---- 85 (465)
++||+|+++++.||++|++.||++|+++||+|+|++++.+.+.+++. +++|..++..++.. ...
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~----------G~~~~~~~~~~~~~--~~~~~~~ 87 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA----------GATVVPYQSEIIDA--DAAEVFG 87 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCEEEECCCSTTTC--CHHHHHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc----------CCEEEecccccccc--ccchhhc
Confidence 68999999999999999999999999999999999999888888876 78999888654432 100
Q ss_pred -----------------------------cccCCCCCC-ccCchHHHHHHHcCCCeEEEcCCchhhhhhhhhhhhhhhcC
Q 012342 86 -----------------------------TAQDAYSLD-GFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKG 135 (465)
Q Consensus 86 -----------------------------~~~~~~~~D-~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 135 (465)
...|+-.+| .+..++..+|+++|||++.+.+.......... .+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~--- 163 (415)
T 3rsc_A 88 SDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSF-SQDMV--- 163 (415)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCH-HHHHH---
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccc-ccccc---
Confidence 000100177 66667888999999999987654321110000 00000
Q ss_pred cCCCCCcccccccccCcceeecCCCCCCccCcCCcccccCCCchhHHHHHHHH------HHhhccc-ceeeecchhhhhH
Q 012342 136 LFPVKDKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEA------TENASKA-SAIIIHTFDALEQ 208 (465)
Q Consensus 136 ~~P~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~l~~~~~~le~ 208 (465)
+ +.....+. ....+ ...+..+.... ....... +..++...+.++.
T Consensus 164 --~-----------------~~~~~~p~----~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~ 215 (415)
T 3rsc_A 164 --T-----------------LAGTIDPL----DLPVF-----RDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQI 215 (415)
T ss_dssp --H-----------------HHTCCCGG----GCHHH-----HHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTST
T ss_pred --c-----------------ccccCChh----hHHHH-----HHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCC
Confidence 0 00000000 00000 00000111000 0111122 5566666555544
Q ss_pred HHHHHHhccCCCceeeecccccccccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeeccccCCCHHHHHHHH
Q 012342 209 QVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVA 288 (465)
Q Consensus 209 ~~~~~~~~~~p~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~ 288 (465)
+ +..++.++.++||++.... +..+|+...+++++|||++||......+.+..++
T Consensus 216 ~-----~~~~~~~~~~vGp~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~ 269 (415)
T 3rsc_A 216 A-----GDTFDDRFVFVGPCFDDRR---------------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCA 269 (415)
T ss_dssp T-----GGGCCTTEEECCCCCCCCG---------------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHH
T ss_pred C-----cccCCCceEEeCCCCCCcc---------------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHH
Confidence 3 4556777999999864221 1233555455678999999999876778889999
Q ss_pred HHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEec
Q 012342 289 MGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICW 368 (465)
Q Consensus 289 ~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~ 368 (465)
+++++.+.+++|.++.+... +.+ +..++|+.+.+|+|+.++|+++++ ||||||+||++|++++|+|+|++
T Consensus 270 ~al~~~~~~~v~~~g~~~~~-------~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 270 RAFDGQPWHVVMTLGGQVDP-------AAL-GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVV 339 (415)
T ss_dssp HHHTTSSCEEEEECTTTSCG-------GGG-CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEEC
T ss_pred HHHhcCCcEEEEEeCCCCCh-------HHh-cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEe
Confidence 99999899999988854211 111 124679999999999999999999 99999999999999999999999
Q ss_pred CCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHH
Q 012342 369 PFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLV 448 (465)
Q Consensus 369 P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 448 (465)
|...||+.||+++ ++.|+|+.+.. ++++.++|.++|+++|+|++ ++++++++++.+.+ .+++++.++.+.
T Consensus 340 p~~~~q~~~a~~l-~~~g~g~~~~~--~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~i~ 409 (415)
T 3rsc_A 340 PQSFDVQPMARRV-DQLGLGAVLPG--EKADGDTLLAAVGAVAADPA---LLARVEAMRGHVRR----AGGAARAADAVE 409 (415)
T ss_dssp CCSGGGHHHHHHH-HHHTCEEECCG--GGCCHHHHHHHHHHHHTCHH---HHHHHHHHHHHHHH----SCHHHHHHHHHH
T ss_pred CCcchHHHHHHHH-HHcCCEEEccc--CCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh----cCHHHHHHHHHH
Confidence 9999999999999 78899999987 77899999999999999987 99999999999885 455555555554
Q ss_pred HHH
Q 012342 449 NEI 451 (465)
Q Consensus 449 ~~~ 451 (465)
+.+
T Consensus 410 ~~~ 412 (415)
T 3rsc_A 410 AYL 412 (415)
T ss_dssp HHH
T ss_pred HHh
Confidence 444
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=3e-35 Score=295.15 Aligned_cols=355 Identities=15% Similarity=0.138 Sum_probs=243.6
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCC-c--
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESP-T-- 86 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~-~-- 86 (465)
++||+|+++++.||++|++.||++|+++||+|+|++++.+.+.+++. +++|..++..++....... .
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~----------G~~~~~~~~~~~~~~~~~~~~~~ 73 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA----------GAEVVLYKSEFDTFHVPEVVKQE 73 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT----------TCEEEECCCGGGTSSSSSSSCCT
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc----------CCEEEeccccccccccccccccc
Confidence 45999999999999999999999999999999999998888888776 7899888754332200000 0
Q ss_pred ----------------------------ccCCCCCC-ccCchHHHHHHHcCCCeEEEcCCchhhhhhhhhhhhhhhcCcC
Q 012342 87 ----------------------------AQDAYSLD-GFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLF 137 (465)
Q Consensus 87 ----------------------------~~~~~~~D-~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (465)
..|+-.+| .+..++..+|+++|||++.+.+.......... .+.....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~--- 149 (402)
T 3ia7_A 74 DAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWKS--- 149 (402)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHHH---
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-ccccccc---
Confidence 00000077 66677888999999999987643221110000 0000000
Q ss_pred CCCCcccccccccCcceeecCCCCCCccCcCCcccccCCCchhHHHHHHHH------HHhhccc-ceeeecchhhhhHHH
Q 012342 138 PVKDKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEA------TENASKA-SAIIIHTFDALEQQV 210 (465)
Q Consensus 138 P~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~l~~~~~~le~~~ 210 (465)
.....+. ....+ ......+.... ....... +..+.....+++.+
T Consensus 150 -------------------~~~~~~~----~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~- 200 (402)
T 3ia7_A 150 -------------------NGQRHPA----DVEAV-----HSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF- 200 (402)
T ss_dssp -------------------HTCCCGG----GSHHH-----HHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-
T ss_pred -------------------ccccChh----hHHHH-----HHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-
Confidence 0000000 00000 00000000000 0011112 55555555555443
Q ss_pred HHHHhccCCCceeeecccccccccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeeccccCCCHHHHHHHHHH
Q 012342 211 LNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMG 290 (465)
Q Consensus 211 ~~~~~~~~p~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~a 290 (465)
...++.++.++||+..... +...|+...+++++|||++||......+.+..++++
T Consensus 201 ----~~~~~~~~~~vGp~~~~~~---------------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~ 255 (402)
T 3ia7_A 201 ----AETFDERFAFVGPTLTGRD---------------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQA 255 (402)
T ss_dssp ----GGGCCTTEEECCCCCCC-------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHH
T ss_pred ----cccCCCCeEEeCCCCCCcc---------------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHH
Confidence 3556777999999864221 122355445567899999999987777788999999
Q ss_pred HHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCC
Q 012342 291 LVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPF 370 (465)
Q Consensus 291 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~ 370 (465)
+...+.+++|.++.+... +.+ ...++|+.+.+|+|+.++|+++++ ||||||+||++|++++|+|+|++|.
T Consensus 256 ~~~~~~~~~~~~g~~~~~-------~~~-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~ 325 (402)
T 3ia7_A 256 FADTPWHVVMAIGGFLDP-------AVL-GPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPH 325 (402)
T ss_dssp HTTSSCEEEEECCTTSCG-------GGG-CSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGG
T ss_pred HhcCCcEEEEEeCCcCCh-------hhh-CCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCC
Confidence 999898999888754211 111 124679999999999999999999 9999999999999999999999999
Q ss_pred -CCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHH
Q 012342 371 -TGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVN 449 (465)
Q Consensus 371 -~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 449 (465)
..||+.||+++ ++.|+|+.+.. ++++.++|.++|.++|+|++ ++++++++++.+.+ ++++++.++.+.+
T Consensus 326 ~~~~q~~~a~~~-~~~g~g~~~~~--~~~~~~~l~~~~~~ll~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 395 (402)
T 3ia7_A 326 FATEAAPSAERV-IELGLGSVLRP--DQLEPASIREAVERLAADSA---VRERVRRMQRDILS----SGGPARAADEVEA 395 (402)
T ss_dssp GCGGGHHHHHHH-HHTTSEEECCG--GGCSHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT----SCHHHHHHHHHHH
T ss_pred CcccHHHHHHHH-HHcCCEEEccC--CCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHhh----CChHHHHHHHHHH
Confidence 99999999999 78899999987 77899999999999999987 99999999998874 4556666665555
Q ss_pred HHH
Q 012342 450 EIL 452 (465)
Q Consensus 450 ~~~ 452 (465)
.+.
T Consensus 396 ~~~ 398 (402)
T 3ia7_A 396 YLG 398 (402)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.4e-34 Score=293.39 Aligned_cols=352 Identities=16% Similarity=0.146 Sum_probs=237.3
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCC-ccc
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESP-TAQ 88 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~-~~~ 88 (465)
++||++++.++.||++|++.|+++|+++||+|+++++..+.+.+.+. +++++.++...+....... ...
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~ 76 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT----------GPRPVLYHSTLPGPDADPEAWGS 76 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT----------SCEEEECCCCSCCTTSCGGGGCS
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC----------CCEEEEcCCcCccccccccccch
Confidence 57999999999999999999999999999999999998877666654 7888888865432200000 000
Q ss_pred C-----------------------------CCCCCccCchHHHHHHHcCCCeEEEcCCchhhhhhhhhhhhhhhcCcCCC
Q 012342 89 D-----------------------------AYSLDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPV 139 (465)
Q Consensus 89 ~-----------------------------~~~~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~ 139 (465)
+ +-.+|.+..++..+|+++|||++.+++...........+... ..+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~----~~~- 151 (430)
T 2iyf_A 77 TLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEP----MWR- 151 (430)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHH----HHH-
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccc----hhh-
Confidence 0 000666656788899999999998876543111000000000 000
Q ss_pred CCcccccccccCcceeecCCCCCCccCcCCcccccCCCchhHHHHHHH------HHHhhcccceeeecchhhhhHHHHHH
Q 012342 140 KDKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVE------ATENASKASAIIIHTFDALEQQVLNA 213 (465)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~le~~~~~~ 213 (465)
.....+++. . + .....+++.. ..+.....+.+++++.++++++.
T Consensus 152 -------------~~~~~~~~~--------~-~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~--- 201 (430)
T 2iyf_A 152 -------------EPRQTERGR--------A-Y-----YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA--- 201 (430)
T ss_dssp -------------HHHHSHHHH--------H-H-----HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG---
T ss_pred -------------hhccchHHH--------H-H-----HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc---
Confidence 000000000 0 0 0000001100 00111246788999888777641
Q ss_pred HhccCCCc-eeeecccccccccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeeccccCCCHHHHHHHHHHHH
Q 012342 214 LSFMFPHH-LFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLV 292 (465)
Q Consensus 214 ~~~~~p~~-v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~ 292 (465)
..++++ ++++||+..... ...+|.+..+++++||+++||......+.+.+++++++
T Consensus 202 --~~~~~~~v~~vG~~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~ 258 (430)
T 2iyf_A 202 --DRVDEDVYTFVGACQGDRA---------------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFG 258 (430)
T ss_dssp --GGSCTTTEEECCCCC--------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHT
T ss_pred --ccCCCccEEEeCCcCCCCC---------------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHh
Confidence 345666 999998653211 01235554455789999999998556788888999998
Q ss_pred hC-CCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCC
Q 012342 293 NS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFT 371 (465)
Q Consensus 293 ~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~ 371 (465)
.. +.+++|.++.+... +.+ +.+++|+.+.+|+||.++|.++++ ||||||+||++||+++|+|+|++|..
T Consensus 259 ~~~~~~~~~~~G~~~~~-------~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~ 328 (430)
T 2iyf_A 259 NLPGWHLVLQIGRKVTP-------AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQA 328 (430)
T ss_dssp TCTTEEEEEECC---CG-------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred cCCCeEEEEEeCCCCCh-------HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCc
Confidence 85 78888888754211 111 124678999999999999999998 99999999999999999999999999
Q ss_pred CChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHH
Q 012342 372 GDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVN 449 (465)
Q Consensus 372 ~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 449 (465)
.||..|++++ ++.|+|+.+.. +.++.++|.++|.++|+|++ ++++++++++++.+. ++.++.++.+.+
T Consensus 329 ~~q~~~a~~~-~~~g~g~~~~~--~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~i~~ 396 (430)
T 2iyf_A 329 VDQFGNADML-QGLGVARKLAT--EEATADLLRETALALVDDPE---VARRLRRIQAEMAQE----GGTRRAADLIEA 396 (430)
T ss_dssp HHHHHHHHHH-HHTTSEEECCC--C-CCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHHH----CHHHHHHHHHHT
T ss_pred cchHHHHHHH-HHcCCEEEcCC--CCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHhc----CcHHHHHHHHHH
Confidence 9999999999 77899999976 67899999999999999887 999999999888752 344444444433
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.7e-35 Score=297.99 Aligned_cols=345 Identities=12% Similarity=0.087 Sum_probs=225.1
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCC--CC-------
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLP--AS------- 80 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~--~~------- 80 (465)
.|||+|++.|+.||++|+++||++|+++||+|+|++++.+.+.+++. +++|+.++...+ ..
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~----------G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA----------GLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT----------TCCEEECSCCCCHHHHHHHTTHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC----------CCceeecCCccchHHHhhhhhcc
Confidence 58999999999999999999999999999999999998887777765 788888875421 00
Q ss_pred -------CCC----CCc------------c----cC-CC---C-----------------CCccCchHHHHHHHcCCCeE
Q 012342 81 -------SDE----SPT------------A----QD-AY---S-----------------LDGFLPFTITAAQQLGLPIV 112 (465)
Q Consensus 81 -------~~~----~~~------------~----~~-~~---~-----------------~D~~~~~~~~vA~~lgiP~v 112 (465)
.+. ... . .. +. . +|.++.++..+|+.+|||++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~v 169 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPHA 169 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCEE
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCEE
Confidence 000 000 0 00 00 1 67766788889999999999
Q ss_pred EEcCCchhhhhhhhhhhhhhhcCcCCCCCcccccccccCcceeecCCCCCCccCcCCcccccCCCchhHHHHHHHHHHhh
Q 012342 113 LFFTISACSFMGFKQFQTFKEKGLFPVKDKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENA 192 (465)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 192 (465)
.+...+.........+... .++ .|.. .+ .....+.+....+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~--~~~--------------------~~~~------~~---------~~~~~~~l~~~~~~~ 212 (441)
T 2yjn_A 170 RLLWGPDITTRARQNFLGL--LPD--------------------QPEE------HR---------EDPLAEWLTWTLEKY 212 (441)
T ss_dssp EECSSCCHHHHHHHHHHHH--GGG--------------------SCTT------TC---------CCHHHHHHHHHHHHT
T ss_pred EEecCCCcchhhhhhhhhh--ccc--------------------cccc------cc---------cchHHHHHHHHHHHc
Confidence 8854332211100000000 000 0000 00 001111121112111
Q ss_pred c---------ccceeeecchhhhhHHHHHHHhccCC-CceeeecccccccccchhhccccccCCCCCccchhhhhhhccc
Q 012342 193 S---------KASAIIIHTFDALEQQVLNALSFMFP-HHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDC 262 (465)
Q Consensus 193 ~---------~~~~~l~~~~~~le~~~~~~~~~~~p-~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 262 (465)
. ..+..+....+.++++ ..++ .++.++++ ..+.++.+|++.
T Consensus 213 g~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~ 263 (441)
T 2yjn_A 213 GGPAFDEEVVVGQWTIDPAPAAIRLD------TGLKTVGMRYVDY-----------------------NGPSVVPEWLHD 263 (441)
T ss_dssp TCCCCCGGGTSCSSEEECSCGGGSCC------CCCCEEECCCCCC-----------------------CSSCCCCGGGSS
T ss_pred CCCCCCccccCCCeEEEecCccccCC------CCCCCCceeeeCC-----------------------CCCcccchHhhc
Confidence 1 1233344333322221 1111 11111110 012245679986
Q ss_pred CCCCceeEEeeccccCC---CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhc
Q 012342 263 KEPKSVIYVNFGSFIFM---NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLK 339 (465)
Q Consensus 263 ~~~~~~V~vs~GS~~~~---~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~ 339 (465)
.+++++|||++||.... ..+.+..+++++...+.++||++++.... .+. .+++|+.+.+|+||.++|+
T Consensus 264 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~----~l~-----~~~~~v~~~~~~~~~~ll~ 334 (441)
T 2yjn_A 264 EPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE----GVA-----NIPDNVRTVGFVPMHALLP 334 (441)
T ss_dssp CCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTS----SCS-----SCCSSEEECCSCCHHHHGG
T ss_pred CCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh----hhc-----cCCCCEEEecCCCHHHHHh
Confidence 66678999999998753 23567778899998899999998854211 111 2367899999999999999
Q ss_pred CCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHH
Q 012342 340 HPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQM 419 (465)
Q Consensus 340 ~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~ 419 (465)
.+++ ||||||+||++|++++|||+|++|+..||+.||+++ ++.|+|+.+.. ++++.++|.++|+++|+|++ +
T Consensus 335 ~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~--~~~~~~~l~~~i~~ll~~~~---~ 406 (441)
T 2yjn_A 335 TCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPV--PELTPDQLRESVKRVLDDPA---H 406 (441)
T ss_dssp GCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCT--TTCCHHHHHHHHHHHHHCHH---H
T ss_pred hCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEccc--ccCCHHHHHHHHHHHhcCHH---H
Confidence 9998 999999999999999999999999999999999999 78899999987 77899999999999999887 9
Q ss_pred HHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 012342 420 RNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEI 451 (465)
Q Consensus 420 ~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 451 (465)
+++++++++++++ ..+.++.++.+.+.+
T Consensus 407 ~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 407 RAGAARMRDDMLA----EPSPAEVVGICEELA 434 (441)
T ss_dssp HHHHHHHHHHHHT----SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCCHHHHHHHHHHHH
Confidence 9999999999884 344544444444333
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.8e-34 Score=288.23 Aligned_cols=332 Identities=14% Similarity=0.121 Sum_probs=229.2
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCC------------C
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGL------------P 78 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~------------~ 78 (465)
|||++++.++.||++|++.|+++|+++||+|++++++.+.+.+... +++++.++... +
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~ 70 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV----------GLPAVATTDLPIRHFITTDREGRP 70 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCCEEESCSSCHHHHHHBCTTSCB
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC----------CCEEEEeCCcchHHHHhhhcccCc
Confidence 5999999999999999999999999999999999998877666665 67787776432 0
Q ss_pred CCCCCCC-c-c----cC-----------------------CCCCCccCchHHHHHHHcCCCeEEEcCCchhhhhhhhhhh
Q 012342 79 ASSDESP-T-A----QD-----------------------AYSLDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQ 129 (465)
Q Consensus 79 ~~~~~~~-~-~----~~-----------------------~~~~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 129 (465)
... +.. . . .. +-.+|.+..++..+|+.+|||++.+...+...
T Consensus 71 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~-------- 141 (384)
T 2p6p_A 71 EAI-PSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA-------- 141 (384)
T ss_dssp CCC-CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC--------
T ss_pred ccc-CcchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc--------
Confidence 000 000 0 0 00 00055555566677777888877664321000
Q ss_pred hhhhcCcCCCCCcccccccccCcceeecCCCCCCccCcCCcccccCCCchhHHHHHHHH-HHhhcccceeeecchhhhhH
Q 012342 130 TFKEKGLFPVKDKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEA-TENASKASAIIIHTFDALEQ 208 (465)
Q Consensus 130 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~le~ 208 (465)
.+ +.... .....++.... ......++.+++++.+.++.
T Consensus 142 ----------------------------~~--------~~~~~-----~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 180 (384)
T 2p6p_A 142 ----------------------------DG--------IHPGA-----DAELRPELSELGLERLPAPDLFIDICPPSLRP 180 (384)
T ss_dssp ----------------------------TT--------THHHH-----HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSC
T ss_pred ----------------------------ch--------hhHHH-----HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCC
Confidence 00 00000 00000011000 00001156778888776664
Q ss_pred HHHHHHhccCC-CceeeecccccccccchhhccccccCCCCCccchhhhhhhcccCCCCceeEEeeccccCC-----CHH
Q 012342 209 QVLNALSFMFP-HHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFM-----NKQ 282 (465)
Q Consensus 209 ~~~~~~~~~~p-~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~-----~~~ 282 (465)
+ ++ ++ .++.++++ . .+.++.+|++..+++++|||++||.... ..+
T Consensus 181 ~-----~~-~~~~~~~~~~~-~----------------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~ 231 (384)
T 2p6p_A 181 A-----NA-APARMMRHVAT-S----------------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFD 231 (384)
T ss_dssp T-----TS-CCCEECCCCCC-C----------------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCT
T ss_pred C-----CC-CCCCceEecCC-C----------------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHH
Confidence 3 11 22 22334321 0 0123456887655568999999998754 446
Q ss_pred HHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHHHhcC
Q 012342 283 QLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSG 362 (465)
Q Consensus 283 ~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~G 362 (465)
.+..+++++.+.+.+++|+.++.. .+.+ +.+++|+.+ +|+||.++|+++++ ||||||+||++||+++|
T Consensus 232 ~~~~~~~al~~~~~~~~~~~g~~~--------~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G 299 (384)
T 2p6p_A 232 FLRGLAKDLVRWDVELIVAAPDTV--------AEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAG 299 (384)
T ss_dssp THHHHHHHHHTTTCEEEEECCHHH--------HHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTT
T ss_pred HHHHHHHHHhcCCcEEEEEeCCCC--------HHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhC
Confidence 788899999999999999887421 1222 235789999 99999999999988 99999999999999999
Q ss_pred CcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHH
Q 012342 363 VPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSL 442 (465)
Q Consensus 363 vP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 442 (465)
+|+|++|...||+.||+++ ++.|+|+.+.. +.++.++|.++|+++|+|++ ++++++++++++++ ..+.++
T Consensus 300 ~P~v~~p~~~dq~~~a~~~-~~~g~g~~~~~--~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~----~~~~~~ 369 (384)
T 2p6p_A 300 VPQLLIPKGSVLEAPARRV-ADYGAAIALLP--GEDSTEAIADSCQELQAKDT---YARRAQDLSREISG----MPLPAT 369 (384)
T ss_dssp CCEEECCCSHHHHHHHHHH-HHHTSEEECCT--TCCCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT----SCCHHH
T ss_pred CCEEEccCcccchHHHHHH-HHCCCeEecCc--CCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh----CCCHHH
Confidence 9999999999999999999 78899999876 67899999999999999887 99999999999985 345556
Q ss_pred HHHHHHHHHHh
Q 012342 443 NLDKLVNEILL 453 (465)
Q Consensus 443 ~~~~~~~~~~~ 453 (465)
.++.+.+.+.+
T Consensus 370 ~~~~i~~~~~~ 380 (384)
T 2p6p_A 370 VVTALEQLAHH 380 (384)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 66555555443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.97 E-value=5.6e-32 Score=271.44 Aligned_cols=160 Identities=14% Similarity=0.213 Sum_probs=123.5
Q ss_pred hhhhcccCCCCceeEEeeccccCC--------CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCce
Q 012342 256 CLQWLDCKEPKSVIYVNFGSFIFM--------NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGF 327 (465)
Q Consensus 256 l~~~l~~~~~~~~V~vs~GS~~~~--------~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (465)
+.+|+...+++++|||++||.... ..+.+..+++++.+.+.+++|+.++... +.+ ..+++|+.
T Consensus 217 ~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~--------~~l-~~~~~~v~ 287 (398)
T 4fzr_A 217 VPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLA--------QTL-QPLPEGVL 287 (398)
T ss_dssp CCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-----------------CCTTEE
T ss_pred CchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcch--------hhh-ccCCCcEE
Confidence 455776655678999999998643 2355788999999889999998875421 111 23478999
Q ss_pred EeeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHH
Q 012342 328 VASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLV 407 (465)
Q Consensus 328 v~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai 407 (465)
+.+|+|+.++|.++++ ||||||.||++||+++|+|+|++|...||+.|+.++ ++.|+|+.+.. +.++.++|.++|
T Consensus 288 ~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~--~~~~~~~l~~ai 362 (398)
T 4fzr_A 288 AAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLL-HAAGAGVEVPW--EQAGVESVLAAC 362 (398)
T ss_dssp EESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH-HHTTSEEECC---------CHHHHH
T ss_pred EeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCc--ccCCHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999 78899999977 778999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHH
Q 012342 408 REMMEGEKGKQMRNKAMEWKGLAEE 432 (465)
Q Consensus 408 ~~~l~~~~~~~~~~~a~~l~~~~~~ 432 (465)
.++|+|++ +++++++.++++.+
T Consensus 363 ~~ll~~~~---~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 363 ARIRDDSS---YVGNARRLAAEMAT 384 (398)
T ss_dssp HHHHHCTH---HHHHHHHHHHHHTT
T ss_pred HHHHhCHH---HHHHHHHHHHHHHc
Confidence 99999998 99999999988874
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.97 E-value=7.8e-31 Score=263.14 Aligned_cols=156 Identities=13% Similarity=0.204 Sum_probs=131.7
Q ss_pred hhhhcccCCCCceeEEeeccccCC--CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccC
Q 012342 256 CLQWLDCKEPKSVIYVNFGSFIFM--NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCP 333 (465)
Q Consensus 256 l~~~l~~~~~~~~V~vs~GS~~~~--~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p 333 (465)
+..|+...+++++|||++||.... ..+.+..+++++++.+.+++|+.++... +.+ ..+++|+.+.+|+|
T Consensus 222 ~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~--------~~l-~~~~~~v~~~~~~~ 292 (398)
T 3oti_A 222 LGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDI--------SPL-GTLPRNVRAVGWTP 292 (398)
T ss_dssp CCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCC--------GGG-CSCCTTEEEESSCC
T ss_pred CchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcCh--------hhh-ccCCCcEEEEccCC
Confidence 345776556678999999998542 4567888999999999999999886521 111 12467999999999
Q ss_pred hhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHH--HhhcccceeEEEEecCCCCCCHHHHHHHHHHHh
Q 012342 334 QEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNG--RYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 411 (465)
Q Consensus 334 ~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na--~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l 411 (465)
+.++|+++++ ||||||.||++||+++|+|+|++|+..||+.|| .++ ++.|+|+.+.. ++.+.+.|. ++|
T Consensus 293 ~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~-~~~g~g~~~~~--~~~~~~~l~----~ll 363 (398)
T 3oti_A 293 LHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAV-SRRGIGLVSTS--DKVDADLLR----RLI 363 (398)
T ss_dssp HHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHH-HHHTSEEECCG--GGCCHHHHH----HHH
T ss_pred HHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHH-HHCCCEEeeCC--CCCCHHHHH----HHH
Confidence 9999999998 999999999999999999999999999999999 999 88999999977 677888777 788
Q ss_pred cCChHHHHHHHHHHHHHHHHH
Q 012342 412 EGEKGKQMRNKAMEWKGLAEE 432 (465)
Q Consensus 412 ~~~~~~~~~~~a~~l~~~~~~ 432 (465)
+|++ ++++++++++++.+
T Consensus 364 ~~~~---~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 364 GDES---LRTAAREVREEMVA 381 (398)
T ss_dssp HCHH---HHHHHHHHHHHHHT
T ss_pred cCHH---HHHHHHHHHHHHHh
Confidence 8887 99999999999884
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.97 E-value=2.1e-29 Score=251.95 Aligned_cols=170 Identities=12% Similarity=0.170 Sum_probs=136.4
Q ss_pred hhhhcccCCCCceeEEeeccccC--CC-HHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeec
Q 012342 256 CLQWLDCKEPKSVIYVNFGSFIF--MN-KQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASW 331 (465)
Q Consensus 256 l~~~l~~~~~~~~V~vs~GS~~~--~~-~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 331 (465)
+..|+...+++++||+++||... .. .+.+..++++ ++. +.+++|+.++... +.+ ...++|+.+.+|
T Consensus 208 ~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~--------~~l-~~~~~~v~~~~~ 277 (391)
T 3tsa_A 208 FPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHR--------ALL-TDLPDNARIAES 277 (391)
T ss_dssp CCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGG--------GGC-TTCCTTEEECCS
T ss_pred CCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcch--------hhc-ccCCCCEEEecc
Confidence 34577655667899999999843 23 6778888888 777 7788888775421 111 124678999999
Q ss_pred cChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEec--CCCCCCHHHHHHHHHH
Q 012342 332 CPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEING--DDEDVIRNEVEKLVRE 409 (465)
Q Consensus 332 ~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~--~~~~~~~~~l~~ai~~ 409 (465)
+|+.++|+++++ ||||||.||++||+++|+|+|++|...||+.|+.++ ++.|+|+.+.. . ..+.++|.++|.+
T Consensus 278 ~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~--~~~~~~l~~ai~~ 352 (391)
T 3tsa_A 278 VPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNL-AAAGAGICLPDEQA--QSDHEQFTDSIAT 352 (391)
T ss_dssp CCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH-HHTTSEEECCSHHH--HTCHHHHHHHHHH
T ss_pred CCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHH-HHcCCEEecCcccc--cCCHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999999 88899998841 0 1689999999999
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHH
Q 012342 410 MMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKL 447 (465)
Q Consensus 410 ~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 447 (465)
+|+|++ ++++++++++.+.+ ..+..+.++.+
T Consensus 353 ll~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~i 383 (391)
T 3tsa_A 353 VLGDTG---FAAAAIKLSDEITA----MPHPAALVRTL 383 (391)
T ss_dssp HHTCTH---HHHHHHHHHHHHHT----SCCHHHHHHHH
T ss_pred HHcCHH---HHHHHHHHHHHHHc----CCCHHHHHHHH
Confidence 999998 99999999988874 44554444443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.96 E-value=1e-27 Score=241.24 Aligned_cols=169 Identities=20% Similarity=0.295 Sum_probs=140.8
Q ss_pred CCCCceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCC
Q 012342 263 KEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPS 342 (465)
Q Consensus 263 ~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~ 342 (465)
.+++++|++++||......+.+..+++++.+.+.+++|+.+....... +. .+++|+.+.+|+|+.++|.+++
T Consensus 239 ~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~---l~-----~~~~~v~~~~~~~~~~~l~~ad 310 (412)
T 3otg_A 239 DTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSG---LG-----EVPANVRLESWVPQAALLPHVD 310 (412)
T ss_dssp CTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTT---CC-----CCCTTEEEESCCCHHHHGGGCS
T ss_pred cCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChhh---hc-----cCCCcEEEeCCCCHHHHHhcCc
Confidence 345679999999997666788999999999989999999886531111 11 2367899999999999999999
Q ss_pred cceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCChHHHHHHH
Q 012342 343 IGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNK 422 (465)
Q Consensus 343 ~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~ 422 (465)
+ ||+|||+||++||+++|+|+|++|...||..|+..+ ++.|+|+.+.. +.++.++|.++|.++|+|++ ++++
T Consensus 311 ~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~--~~~~~~~l~~ai~~ll~~~~---~~~~ 382 (412)
T 3otg_A 311 L--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAV-AQAGAGDHLLP--DNISPDSVSGAAKRLLAEES---YRAG 382 (412)
T ss_dssp E--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECCG--GGCCHHHHHHHHHHHHHCHH---HHHH
T ss_pred E--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCc--ccCCHHHHHHHHHHHHhCHH---HHHH
Confidence 9 999999999999999999999999999999999999 78899999977 67899999999999999987 9999
Q ss_pred HHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 012342 423 AMEWKGLAEEAAAPHGSSSLNLDKLVNEI 451 (465)
Q Consensus 423 a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 451 (465)
+++.++++.+ ..+.++.++.+.+.+
T Consensus 383 ~~~~~~~~~~----~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 383 ARAVAAEIAA----MPGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHHH----SCCHHHHHTTHHHHH
T ss_pred HHHHHHHHhc----CCCHHHHHHHHHHHh
Confidence 9999888875 345555554444433
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=2.1e-26 Score=202.88 Aligned_cols=161 Identities=20% Similarity=0.417 Sum_probs=137.5
Q ss_pred hhhhhhhcccCCCCceeEEeecccc-CCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeec
Q 012342 253 ETECLQWLDCKEPKSVIYVNFGSFI-FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASW 331 (465)
Q Consensus 253 ~~~l~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 331 (465)
+.++.+|++..+++++|||++||.. ....+.+..+++++++.+.+++|+.++.. ++ .+++|+.+.+|
T Consensus 8 ~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------~~----~~~~~v~~~~~ 75 (170)
T 2o6l_A 8 PKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------PD----TLGLNTRLYKW 75 (170)
T ss_dssp CHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------CT----TCCTTEEEESS
T ss_pred CHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------cc----cCCCcEEEecC
Confidence 4578899987766789999999986 44677888999999988999999987542 11 13678999999
Q ss_pred cChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHh
Q 012342 332 CPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 411 (465)
Q Consensus 332 ~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l 411 (465)
+||.++|.|+.+.+||||||+||++|++++|+|+|++|...||..||+++ ++.|+|+.+.. +.++.++|.++|.+++
T Consensus 76 ~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~--~~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 76 IPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDF--NTMSSTDLLNALKRVI 152 (170)
T ss_dssp CCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCT--TTCCHHHHHHHHHHHH
T ss_pred CCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEecc--ccCCHHHHHHHHHHHH
Confidence 99999996665666999999999999999999999999999999999999 78899999987 7789999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHH
Q 012342 412 EGEKGKQMRNKAMEWKGLAE 431 (465)
Q Consensus 412 ~~~~~~~~~~~a~~l~~~~~ 431 (465)
+|++ |++++++++++++
T Consensus 153 ~~~~---~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 153 NDPS---YKENVMKLSRIQH 169 (170)
T ss_dssp HCHH---HHHHHHHHC----
T ss_pred cCHH---HHHHHHHHHHHhh
Confidence 9887 9999999998876
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.91 E-value=1.8e-22 Score=199.85 Aligned_cols=137 Identities=12% Similarity=0.098 Sum_probs=105.3
Q ss_pred CCCceeEEeeccccCCCHHHHHHHHHHHHhC----CCCEEEEEcCCCCCCCcCCCchhHH---HHhccCceEeeccChh-
Q 012342 264 EPKSVIYVNFGSFIFMNKQQLIEVAMGLVNS----NHPFLWIIRPDLVTGETADLPAEFE---VKAKEKGFVASWCPQE- 335 (465)
Q Consensus 264 ~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~----~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~p~~- 335 (465)
++++.|+|..||..... ....+.+++... +..+++.++... .+... ...+.++.+.+|++++
T Consensus 178 ~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~~--------~~~~~~~~~~~~~~~~v~~f~~dm~ 247 (365)
T 3s2u_A 178 GRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQH--------AEITAERYRTVAVEADVAPFISDMA 247 (365)
T ss_dssp TSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTTT--------HHHHHHHHHHTTCCCEEESCCSCHH
T ss_pred CCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCccc--------cccccceecccccccccccchhhhh
Confidence 34568999999986432 223344555443 445666666442 22222 2345688899999986
Q ss_pred hhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCC----CChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHh
Q 012342 336 EVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFT----GDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 411 (465)
Q Consensus 336 ~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~----~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l 411 (465)
++|..+|+ +|||+|.+|++|++++|+|+|.+|+- .+|..||+.+ ++.|+|+.+.. +++++++|.++|.++|
T Consensus 248 ~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l-~~~G~a~~l~~--~~~~~~~L~~~i~~ll 322 (365)
T 3s2u_A 248 AAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL-VRSGAGRLLPQ--KSTGAAELAAQLSEVL 322 (365)
T ss_dssp HHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH-HTTTSEEECCT--TTCCHHHHHHHHHHHH
T ss_pred hhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH-HHCCCEEEeec--CCCCHHHHHHHHHHHH
Confidence 69999999 99999999999999999999999973 4799999999 77899999987 7899999999999999
Q ss_pred cCCh
Q 012342 412 EGEK 415 (465)
Q Consensus 412 ~~~~ 415 (465)
+|++
T Consensus 323 ~d~~ 326 (365)
T 3s2u_A 323 MHPE 326 (365)
T ss_dssp HCTH
T ss_pred CCHH
Confidence 9986
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.69 E-value=4.9e-15 Score=145.87 Aligned_cols=167 Identities=11% Similarity=0.033 Sum_probs=113.9
Q ss_pred CCceeEEeeccccCCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCcCCCchhHHH---Hhc-cCceEeeccCh-hhh
Q 012342 265 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEV---KAK-EKGFVASWCPQ-EEV 337 (465)
Q Consensus 265 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~v~~~~p~-~~~ 337 (465)
++++|++..|+... ......+++++... +.++++..|.+. .+.+.+ +.+ +++.+.+|+++ ..+
T Consensus 182 ~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~--------~~~l~~~~~~~~~~~v~~~g~~~~~~~~ 251 (364)
T 1f0k_A 182 GPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS--------QQSVEQAYAEAGQPQHKVTEFIDDMAAA 251 (364)
T ss_dssp SSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC--------HHHHHHHHHHTTCTTSEEESCCSCHHHH
T ss_pred CCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch--------HHHHHHHHhhcCCCceEEecchhhHHHH
Confidence 34567777778753 33344444555443 456667666542 122322 222 57889999955 679
Q ss_pred hcCCCcceeeecCCchhHHHHHhcCCcEEecCCC---CChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCC
Q 012342 338 LKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFT---GDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 414 (465)
Q Consensus 338 l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~---~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~ 414 (465)
+..+++ ||+++|.+++.||+++|+|+|+.|.. .||..|++.+ .+.|.|+.+.. ++.+.+++.++|.++ |+
T Consensus 252 ~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~-~~~g~g~~~~~--~d~~~~~la~~i~~l--~~ 324 (364)
T 1f0k_A 252 YAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL-EKAGAAKIIEQ--PQLSVDAVANTLAGW--SR 324 (364)
T ss_dssp HHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH-HHTTSEEECCG--GGCCHHHHHHHHHTC--CH
T ss_pred HHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH-HhCCcEEEecc--ccCCHHHHHHHHHhc--CH
Confidence 999999 99999999999999999999999987 7899999999 66788988866 566799999999988 55
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhcC
Q 012342 415 KGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLSN 455 (465)
Q Consensus 415 ~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 455 (465)
+ .+++..+-+.+. .+..+.++.++.+.+.+.+..
T Consensus 325 ~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 325 E---TLLTMAERARAA----SIPDATERVANEVSRVARALE 358 (364)
T ss_dssp H---HHHHHHHHHHHT----CCTTHHHHHHHHHHHHHTTC-
T ss_pred H---HHHHHHHHHHHh----hccCHHHHHHHHHHHHHHHHH
Confidence 4 444433333222 234555555666665555543
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.54 E-value=8.3e-15 Score=132.80 Aligned_cols=132 Identities=13% Similarity=0.117 Sum_probs=95.5
Q ss_pred CCCCceeEEeeccccCCCHHHHHHH-----HHHHHhCC-CCEEEEEcCCCCCCCcCCCchhHHHHh---------c----
Q 012342 263 KEPKSVIYVNFGSFIFMNKQQLIEV-----AMGLVNSN-HPFLWIIRPDLVTGETADLPAEFEVKA---------K---- 323 (465)
Q Consensus 263 ~~~~~~V~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~---------~---- 323 (465)
.+++++|||+.||... -.+.+..+ +++|...+ .++++.+|..... ..+.+.... +
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-----~~~~~~~~~~~~~~~~l~p~~~~ 98 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-----EFEHLVQERGGQRESQKIPIDQF 98 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-----CCCSHHHHHTCEECSCCCSSCTT
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-----hHHHHHHhhhccccccccccccc
Confidence 3456799999999742 34444444 48888877 7899999865420 011111111 1
Q ss_pred -------------c--CceEeeccChh-hhhc-CCCcceeeecCCchhHHHHHhcCCcEEecCCC----CChhhHHHhhc
Q 012342 324 -------------E--KGFVASWCPQE-EVLK-HPSIGGFLTHCGWNSIVESLCSGVPMICWPFT----GDQPTNGRYVC 382 (465)
Q Consensus 324 -------------~--~~~v~~~~p~~-~~l~-~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~----~DQ~~na~~~~ 382 (465)
. ++.+.+|++++ .+|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++
T Consensus 99 ~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l- 175 (224)
T 2jzc_A 99 GCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF- 175 (224)
T ss_dssp CTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH-
T ss_pred cccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH-
Confidence 1 34457888886 7999 9999 99999999999999999999999984 3699999999
Q ss_pred ccceeEEEEecCCCCCCHHHHHHHHHHH
Q 012342 383 NEWGVGMEINGDDEDVIRNEVEKLVREM 410 (465)
Q Consensus 383 ~~~g~g~~~~~~~~~~~~~~l~~ai~~~ 410 (465)
++.|+++.+ +.++|.++|.++
T Consensus 176 ~~~G~~~~~-------~~~~L~~~i~~l 196 (224)
T 2jzc_A 176 VELGYVWSC-------APTETGLIAGLR 196 (224)
T ss_dssp HHHSCCCEE-------CSCTTTHHHHHH
T ss_pred HHCCCEEEc-------CHHHHHHHHHHH
Confidence 778998655 345667777766
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=98.99 E-value=1.5e-09 Score=102.28 Aligned_cols=115 Identities=9% Similarity=0.049 Sum_probs=89.3
Q ss_pred CceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHh--ccCceEeeccChh-hhhcCCC
Q 012342 266 KSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFVASWCPQE-EVLKHPS 342 (465)
Q Consensus 266 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~p~~-~~l~~~~ 342 (465)
.+.|+|++|..... .....++++|.... ++.++++.+.. ..+.+.+.. ..|+.+.+|++++ .++..++
T Consensus 157 ~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD 227 (282)
T 3hbm_A 157 KYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP------NLKKLQKFAKLHNNIRLFIDHENIAKLMNESN 227 (282)
T ss_dssp CEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT------THHHHHHHHHTCSSEEEEESCSCHHHHHHTEE
T ss_pred CCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch------HHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC
Confidence 45899999986533 35556778876654 67777776532 223333222 2478899999987 5999999
Q ss_pred cceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEec
Q 012342 343 IGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEING 393 (465)
Q Consensus 343 ~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~ 393 (465)
+ +|++|| +|++|+++.|+|+|.+|+..+|..||+.+ ++.|+++.+..
T Consensus 228 l--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~ 274 (282)
T 3hbm_A 228 K--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKY 274 (282)
T ss_dssp E--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGG
T ss_pred E--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcch
Confidence 9 999999 89999999999999999999999999999 78899988753
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.99 E-value=1.5e-07 Score=92.72 Aligned_cols=164 Identities=12% Similarity=0.115 Sum_probs=101.7
Q ss_pred CceeEEeecccc-CCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCcCCCchhHHH---HhccCceEeeccChhh---
Q 012342 266 KSVIYVNFGSFI-FMNKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEV---KAKEKGFVASWCPQEE--- 336 (465)
Q Consensus 266 ~~~V~vs~GS~~-~~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~p~~~--- 336 (465)
+..+++..|+.. ....+.+.+.+..+.+. +.+++++ |.+. ..+.+.+ .+.+++.+.+|+|+.+
T Consensus 197 ~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g~-------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~ 268 (394)
T 3okp_A 197 TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GSGR-------YESTLRRLATDVSQNVKFLGRLEYQDMIN 268 (394)
T ss_dssp TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CCCT-------THHHHHHHTGGGGGGEEEEESCCHHHHHH
T ss_pred CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cCch-------HHHHHHHHHhcccCeEEEcCCCCHHHHHH
Confidence 346777788874 23445555544444332 4555544 4321 2223322 3357899999998654
Q ss_pred hhcCCCcceeee-----------cCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHH
Q 012342 337 VLKHPSIGGFLT-----------HCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEK 405 (465)
Q Consensus 337 ~l~~~~~~~~i~-----------hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ 405 (465)
++..+++ +|. -|.-+++.||+++|+|+|+.+.. .....+ +. |.|+.+. .-+.+++.+
T Consensus 269 ~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~i-~~-~~g~~~~----~~d~~~l~~ 336 (394)
T 3okp_A 269 TLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG----GAPETV-TP-ATGLVVE----GSDVDKLSE 336 (394)
T ss_dssp HHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST----TGGGGC-CT-TTEEECC----TTCHHHHHH
T ss_pred HHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC----ChHHHH-hc-CCceEeC----CCCHHHHHH
Confidence 7889998 775 45567899999999999996653 334444 44 3777774 347999999
Q ss_pred HHHHHhcCCh-HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhcCC
Q 012342 406 LVREMMEGEK-GKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLSNK 456 (465)
Q Consensus 406 ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 456 (465)
+|.++++|++ -+++.+++++..+. .=+.+...+.+.+.+.+...
T Consensus 337 ~i~~l~~~~~~~~~~~~~~~~~~~~-------~~s~~~~~~~~~~~~~~~~r 381 (394)
T 3okp_A 337 LLIELLDDPIRRAAMGAAGRAHVEA-------EWSWEIMGERLTNILQSEPR 381 (394)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHH-------HTBHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHhcc
Confidence 9999998765 12344444443322 23455666667666666543
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.84 E-value=1.1e-06 Score=88.20 Aligned_cols=169 Identities=14% Similarity=0.128 Sum_probs=100.5
Q ss_pred CceeEEeeccccC-CCHHHHHHHHHHHHhC----CCCEEEEEcCCCCCCCcCCCchhHHH---H--hccCceEeeccChh
Q 012342 266 KSVIYVNFGSFIF-MNKQQLIEVAMGLVNS----NHPFLWIIRPDLVTGETADLPAEFEV---K--AKEKGFVASWCPQE 335 (465)
Q Consensus 266 ~~~V~vs~GS~~~-~~~~~~~~~~~al~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~v~~~~p~~ 335 (465)
+..+++..|+... ...+.+.+.+..+.+. +.++++ +|.....+ ...+.+.+ + +.+++.+.+|+|+.
T Consensus 242 ~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i-~G~~~~~g---~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 317 (438)
T 3c48_A 242 HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVII-CGGPSGPN---ATPDTYRHMAEELGVEKRIRFLDPRPPS 317 (438)
T ss_dssp SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEE-ECCBC---------CHHHHHHHHTTCTTTEEEECCCCHH
T ss_pred CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEE-EeCCCCCC---cHHHHHHHHHHHcCCCCcEEEcCCCChH
Confidence 3467777888753 3344444444444432 234443 34311000 01222222 2 24688899999864
Q ss_pred ---hhhcCCCcceeeec----CCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHH
Q 012342 336 ---EVLKHPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVR 408 (465)
Q Consensus 336 ---~~l~~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~ 408 (465)
.++..+++ +|.- |..++++||+++|+|+|+.+. ......+ +..+.|+.+. .-+.+++.++|.
T Consensus 318 ~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~----~~d~~~la~~i~ 386 (438)
T 3c48_A 318 ELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVD----GHSPHAWADALA 386 (438)
T ss_dssp HHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEES----SCCHHHHHHHHH
T ss_pred HHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECC----CCCHHHHHHHHH
Confidence 58889998 7654 334689999999999999764 3445555 5556777774 347999999999
Q ss_pred HHhcCCh-HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012342 409 EMMEGEK-GKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 454 (465)
Q Consensus 409 ~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 454 (465)
++++|++ -+++.+++++..+.+.- ....+.+.++.+.+...
T Consensus 387 ~l~~~~~~~~~~~~~~~~~~~~~s~-----~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 387 TLLDDDETRIRMGEDAVEHARTFSW-----AATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHT
T ss_pred HHHcCHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHhhh
Confidence 9998875 23466666666655331 11234445555555544
No 27
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.72 E-value=2.6e-06 Score=84.16 Aligned_cols=128 Identities=9% Similarity=0.101 Sum_probs=84.2
Q ss_pred eeEEeeccc-cC-CCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCcCCCchhHHH---HhccCceEeeccChh---hh
Q 012342 268 VIYVNFGSF-IF-MNKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEV---KAKEKGFVASWCPQE---EV 337 (465)
Q Consensus 268 ~V~vs~GS~-~~-~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~p~~---~~ 337 (465)
.+++..|+. .. ...+.+.+.+..+.+. +.++++ +|.+. . +.+.+ +..+++.+.+++++. .+
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~~~-------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~ 279 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILI-VGRGD-------E-DELREQAGDLAGHLRFLGQVDDATKASA 279 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEE-ESCSC-------H-HHHHHHTGGGGGGEEECCSCCHHHHHHH
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEE-EcCCc-------H-HHHHHHHHhccCcEEEEecCCHHHHHHH
Confidence 577777887 42 3444454545555433 344443 44331 1 23332 225688899999975 68
Q ss_pred hcCCCcceeee----cCCc-hhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhc
Q 012342 338 LKHPSIGGFLT----HCGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 412 (465)
Q Consensus 338 l~~~~~~~~i~----hgG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~ 412 (465)
+..+++ +|. +-|+ +++.||+++|+|+|+.+. ......+ +..+.|+.+. .-+.+++.++|.++++
T Consensus 280 ~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~~----~~d~~~l~~~i~~l~~ 348 (406)
T 2gek_A 280 MRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLVP----VDDADGMAAALIGILE 348 (406)
T ss_dssp HHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHH-TTTTSSEECC----TTCHHHHHHHHHHHHH
T ss_pred HHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHh-cCCCceEEeC----CCCHHHHHHHHHHHHc
Confidence 999999 663 3344 489999999999999765 4555555 5555666663 3478999999999998
Q ss_pred CCh
Q 012342 413 GEK 415 (465)
Q Consensus 413 ~~~ 415 (465)
|++
T Consensus 349 ~~~ 351 (406)
T 2gek_A 349 DDQ 351 (406)
T ss_dssp CHH
T ss_pred CHH
Confidence 765
No 28
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.68 E-value=1.9e-06 Score=84.15 Aligned_cols=143 Identities=15% Similarity=0.271 Sum_probs=91.5
Q ss_pred CceeEEeeccccCCCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCCCcCCCchhHHH---H--hccCceEeeccCh-
Q 012342 266 KSVIYVNFGSFIFMNKQQLIEVAMGLVNSNH----P-FLWIIRPDLVTGETADLPAEFEV---K--AKEKGFVASWCPQ- 334 (465)
Q Consensus 266 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~----~-~l~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~v~~~~p~- 334 (465)
+..+++..|+... .+.+..+++++..... . -++.+|.+. .+.+.+ . +.+++.+.++..+
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK--------PRKFEALAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--------CHHHHHHHHHHTCGGGEEEESCCSCH
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC--------HHHHHHHHHHcCCCCcEEECCCcccH
Confidence 3467777888653 2334555666665422 1 234444431 122222 2 2468888888665
Q ss_pred hhhhcCCCcceeee----cCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHH
Q 012342 335 EEVLKHPSIGGFLT----HCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 410 (465)
Q Consensus 335 ~~~l~~~~~~~~i~----hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~ 410 (465)
..++..+++ +|. -|.-+++.||+++|+|+|+.... .+...+ +..+.|+.+. +.-+.+++.++|.++
T Consensus 265 ~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i-~~~~~g~~~~---~~~~~~~l~~~i~~l 334 (374)
T 2iw1_A 265 SELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYI-ADANCGTVIA---EPFSQEQLNEVLRKA 334 (374)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHH-HHHTCEEEEC---SSCCHHHHHHHHHHH
T ss_pred HHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----Cchhhh-ccCCceEEeC---CCCCHHHHHHHHHHH
Confidence 468999998 775 45677899999999999997763 344455 5557787774 235799999999999
Q ss_pred hcCCh-HHHHHHHHHHHHH
Q 012342 411 MEGEK-GKQMRNKAMEWKG 428 (465)
Q Consensus 411 l~~~~-~~~~~~~a~~l~~ 428 (465)
++|++ -+++.+++++..+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~ 353 (374)
T 2iw1_A 335 LTQSPLRMAWAENARHYAD 353 (374)
T ss_dssp HHCHHHHHHHHHHHHHHHH
T ss_pred HcChHHHHHHHHHHHHHHH
Confidence 98875 1234455555444
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.64 E-value=7.8e-07 Score=88.33 Aligned_cols=131 Identities=12% Similarity=0.108 Sum_probs=81.0
Q ss_pred CCceeEEeeccccCCCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCCCcCCCchhHHHH--hccCceEeeccC---h
Q 012342 265 PKSVIYVNFGSFIFMNKQQLIEVAMGLVN-----SNHPFLWIIRPDLVTGETADLPAEFEVK--AKEKGFVASWCP---Q 334 (465)
Q Consensus 265 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~p---~ 334 (465)
++++|+++.+-..+.... +..+++|+.. .+.++++..+.+.. +.+.+.+. ..+++.+.++++ .
T Consensus 229 ~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~~~~------~~~~l~~~~~~~~~v~~~~~lg~~~~ 301 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGGG-FERICQALITTAEQHPECQILYPVHLNPN------VREPVNKLLKGVSNIVLIEPQQYLPF 301 (396)
T ss_dssp TSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTEEEEEECCBCHH------HHHHHHHHTTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCceEEEEeCCChH------HHHHHHHHHcCCCCEEEeCCCCHHHH
Confidence 345777765322222222 4556666543 34566655443210 11122221 135788877765 3
Q ss_pred hhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCC
Q 012342 335 EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 414 (465)
Q Consensus 335 ~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~ 414 (465)
..++..+++ +|+-.| |.+.||+++|+|+|+..-..+++. .+ + .|.++.+ +. +.++|.++|.++++|+
T Consensus 302 ~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e---~v-~-~G~~~lv----~~-d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 302 VYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE---AV-A-AGTVKLV----GT-NQQQICDALSLLLTDP 368 (396)
T ss_dssp HHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH---HH-H-HTSEEEC----TT-CHHHHHHHHHHHHHCH
T ss_pred HHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH---HH-H-cCceEEc----CC-CHHHHHHHHHHHHcCH
Confidence 468999999 999988 666799999999999855555432 23 3 4776555 32 6999999999999887
Q ss_pred h
Q 012342 415 K 415 (465)
Q Consensus 415 ~ 415 (465)
+
T Consensus 369 ~ 369 (396)
T 3dzc_A 369 Q 369 (396)
T ss_dssp H
T ss_pred H
Confidence 5
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.59 E-value=2.9e-06 Score=86.71 Aligned_cols=94 Identities=14% Similarity=0.100 Sum_probs=65.6
Q ss_pred ccCceEeeccChh---hhhcCC----Ccceeeec---CC-chhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEE
Q 012342 323 KEKGFVASWCPQE---EVLKHP----SIGGFLTH---CG-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEI 391 (465)
Q Consensus 323 ~~~~~v~~~~p~~---~~l~~~----~~~~~i~h---gG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~ 391 (465)
.+++.+.+++|+. .++..+ ++ ||.- -| -++++||+++|+|+|+... ......+ +.-..|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEe
Confidence 4678899999865 478888 88 6632 23 4588999999999999764 3344445 544467677
Q ss_pred ecCCCCCCHHHHHHHHHHHhcCCh-HHHHHHHHHHHH
Q 012342 392 NGDDEDVIRNEVEKLVREMMEGEK-GKQMRNKAMEWK 427 (465)
Q Consensus 392 ~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~ 427 (465)
. .-+.+++.++|.++++|++ -+++.++|++..
T Consensus 407 ~----~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 439 (499)
T 2r60_A 407 D----PEDPEDIARGLLKAFESEETWSAYQEKGKQRV 439 (499)
T ss_dssp C----TTCHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred C----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 4 3478999999999998875 123444554443
No 31
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.59 E-value=3e-05 Score=76.37 Aligned_cols=161 Identities=13% Similarity=0.091 Sum_probs=95.8
Q ss_pred ceeEEeeccccC-CCHHHHHHHHHHHHh-CCCCEEEEEcCCCCCCCcCCCchhHHHH-----hccCceEeeccCh-hhhh
Q 012342 267 SVIYVNFGSFIF-MNKQQLIEVAMGLVN-SNHPFLWIIRPDLVTGETADLPAEFEVK-----AKEKGFVASWCPQ-EEVL 338 (465)
Q Consensus 267 ~~V~vs~GS~~~-~~~~~~~~~~~al~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~p~-~~~l 338 (465)
..+++..|+... ...+.+.+.+..+.+ .+.+++ .+|.+. ..+.+.+. +.+++.+.++..+ ..++
T Consensus 211 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~-i~G~g~-------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~ 282 (394)
T 2jjm_A 211 EKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLL-LVGDGP-------EFCTILQLVKNLHIEDRVLFLGKQDNVAELL 282 (394)
T ss_dssp -CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEE-EECCCT-------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHH
T ss_pred CeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEE-EECCch-------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHH
Confidence 466777788753 334444444444433 244444 444332 12233222 2357777887655 4699
Q ss_pred cCCCcceee----ecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCC
Q 012342 339 KHPSIGGFL----THCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 414 (465)
Q Consensus 339 ~~~~~~~~i----~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~ 414 (465)
..+++ +| .-|..+++.||+++|+|+|+.+.. .....+ +..+.|+.+. .-+.+++.++|.++++|+
T Consensus 283 ~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v-~~~~~g~~~~----~~d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 283 AMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVI-QHGDTGYLCE----VGDTTGVADQAIQLLKDE 351 (394)
T ss_dssp HTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTC-CBTTTEEEEC----TTCHHHHHHHHHHHHHCH
T ss_pred HhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHh-hcCCceEEeC----CCCHHHHHHHHHHHHcCH
Confidence 99999 77 455667899999999999998753 233344 5445777774 347899999999999886
Q ss_pred h-HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHh
Q 012342 415 K-GKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILL 453 (465)
Q Consensus 415 ~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 453 (465)
+ -+++.+++++.. ++ .-+.+...+++.+.+.+
T Consensus 352 ~~~~~~~~~~~~~~---~~----~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 352 ELHRNMGERARESV---YE----QFRSEKIVSQYETIYYD 384 (394)
T ss_dssp HHHHHHHHHHHHHH---HH----HSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---HH----hCCHHHHHHHHHHHHHH
Confidence 5 123444444433 11 23344555555555544
No 32
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.58 E-value=6.2e-06 Score=79.69 Aligned_cols=123 Identities=12% Similarity=0.021 Sum_probs=81.7
Q ss_pred eeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchh---HHHHhccCceEeeccChh---hhhcCC
Q 012342 268 VIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAE---FEVKAKEKGFVASWCPQE---EVLKHP 341 (465)
Q Consensus 268 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~p~~---~~l~~~ 341 (465)
.+++..|+.. ..+.+..+++++...+.+++++-.+. ..+. +.+..++++.+.+|+++. .++..+
T Consensus 163 ~~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~--------~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~a 232 (342)
T 2iuy_A 163 DFLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW--------EPEYFDEITRRYGSTVEPIGEVGGERRLDLLASA 232 (342)
T ss_dssp SCEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC--------CHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHC
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc--------cHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhC
Confidence 4556668765 23334556666666677766653322 1222 233445789999999976 689999
Q ss_pred Ccceeee--c-----------CC-chhHHHHHhcCCcEEecCCCCChhhHHHhhccc--ceeEEEEecCCCCCCHHHHHH
Q 012342 342 SIGGFLT--H-----------CG-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNE--WGVGMEINGDDEDVIRNEVEK 405 (465)
Q Consensus 342 ~~~~~i~--h-----------gG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~--~g~g~~~~~~~~~~~~~~l~~ 405 (465)
++ +|. . -| -+++.||+++|+|+|+.... .+...+ +. -+.|+.+ +. +.+++.+
T Consensus 233 dv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~-~~~~~~~g~~~----~~-d~~~l~~ 300 (342)
T 2iuy_A 233 HA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIV-PSVGEVVGYGT----DF-APDEARR 300 (342)
T ss_dssp SE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHG-GGGEEECCSSS----CC-CHHHHHH
T ss_pred CE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHh-cccCCCceEEc----CC-CHHHHHH
Confidence 98 663 2 23 45799999999999998763 344555 44 3455544 55 8999999
Q ss_pred HHHHHhc
Q 012342 406 LVREMME 412 (465)
Q Consensus 406 ai~~~l~ 412 (465)
+|.++++
T Consensus 301 ~i~~l~~ 307 (342)
T 2iuy_A 301 TLAGLPA 307 (342)
T ss_dssp HHHTSCC
T ss_pred HHHHHHH
Confidence 9999986
No 33
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.57 E-value=3e-05 Score=77.21 Aligned_cols=164 Identities=13% Similarity=0.071 Sum_probs=100.2
Q ss_pred eeEEeecccc-C-CCHHHHHHHHHHHHhC----CCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhh---hh
Q 012342 268 VIYVNFGSFI-F-MNKQQLIEVAMGLVNS----NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEE---VL 338 (465)
Q Consensus 268 ~V~vs~GS~~-~-~~~~~~~~~~~al~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~---~l 338 (465)
.+++..|+.. . ...+.+.+.+..+... +.+++++ |.+... ....-..+.+..++++.+.+|+++.+ ++
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~-G~g~~~--~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 328 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGDPE--LEGWARSLEEKHGNVKVITEMLSREFVRELY 328 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEE-CCCCHH--HHHHHHHHHHHCTTEEEECSCCCHHHHHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEE-cCCChh--HHHHHHHHHhhcCCEEEEcCCCCHHHHHHHH
Confidence 7788889876 3 3556666666666553 4444443 332100 00000112223344445678898854 78
Q ss_pred cCCCcceeeec----CCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhc-C
Q 012342 339 KHPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME-G 413 (465)
Q Consensus 339 ~~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~-~ 413 (465)
..+++ +|.- |--++++||+++|+|+|+... ......+ +. |.|+.+. .-+.+++.++|.++++ +
T Consensus 329 ~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~~-~~g~~~~----~~d~~~la~~i~~ll~~~ 396 (439)
T 3fro_A 329 GSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVK----AGDPGELANAILKALELS 396 (439)
T ss_dssp TTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC-CT-TTCEEEC----TTCHHHHHHHHHHHHHHT
T ss_pred HHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE-Ec-CceEEeC----CCCHHHHHHHHHHHHhcC
Confidence 89998 6632 334689999999999999643 4455555 43 5777774 3579999999999998 6
Q ss_pred Ch-HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012342 414 EK-GKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 454 (465)
Q Consensus 414 ~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 454 (465)
++ -+.+.+++++..+. -+.+...+++.+.+.+.
T Consensus 397 ~~~~~~~~~~~~~~~~~--------~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 397 RSDLSKFRENCKKRAMS--------FSWEKSAERYVKAYTGS 430 (439)
T ss_dssp TTTTHHHHHHHHHHHHT--------SCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhh--------CcHHHHHHHHHHHHHHH
Confidence 64 23455555554422 44566666777666654
No 34
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.51 E-value=7.1e-07 Score=77.92 Aligned_cols=141 Identities=8% Similarity=0.046 Sum_probs=91.7
Q ss_pred ceeEEeeccccCCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCcCCCchhHH----HHhccCceEeeccCh---hhhh
Q 012342 267 SVIYVNFGSFIFMNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFE----VKAKEKGFVASWCPQ---EEVL 338 (465)
Q Consensus 267 ~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~p~---~~~l 338 (465)
..+++..|+... .+.+..+++++... +.+++++..+... . .+ ..+. ..+++|+.+.+|+++ ..++
T Consensus 23 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~-~---~l-~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 23 GDFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKG-D---HA-ERYARKIMKIAPDNVKFLGSVSEEELIDLY 95 (177)
T ss_dssp CSCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTT-S---TH-HHHHHHHHHHSCTTEEEEESCCHHHHHHHH
T ss_pred CCEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccH-H---HH-HHHHHhhhcccCCcEEEeCCCCHHHHHHHH
Confidence 356677788752 33455566666665 5566655433211 0 11 1111 123468999999998 4589
Q ss_pred cCCCcceeee---cCCch-hHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCC
Q 012342 339 KHPSIGGFLT---HCGWN-SIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 414 (465)
Q Consensus 339 ~~~~~~~~i~---hgG~~-s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~ 414 (465)
..+++ +|. +.|++ +++||+++|+|+|+... ..+...+ +..+.|+.+ . -+.+++.++|.++++|+
T Consensus 96 ~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~----~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 96 SRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N----ADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp HHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C----SCHHHHHHHHHHHHHCT
T ss_pred HhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C----CCHHHHHHHHHHHHhCH
Confidence 99998 665 33444 89999999999999754 4556666 655677666 4 26899999999999887
Q ss_pred hHHHHHHHHHHHHH
Q 012342 415 KGKQMRNKAMEWKG 428 (465)
Q Consensus 415 ~~~~~~~~a~~l~~ 428 (465)
+ .+++++++.++
T Consensus 164 ~--~~~~~~~~~a~ 175 (177)
T 2f9f_A 164 D--KFKKDCFRRAK 175 (177)
T ss_dssp T--TTHHHHHHHHH
T ss_pred H--HHHHHHHHHHh
Confidence 5 13555555443
No 35
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.33 E-value=2e-05 Score=77.66 Aligned_cols=157 Identities=13% Similarity=0.062 Sum_probs=94.7
Q ss_pred CceeEEeeccccCCC-HHHHHHHHHHHHhC----CCCEEEEEcCCCCCCCcCCCchhHHHH---h--ccCceEeeccC--
Q 012342 266 KSVIYVNFGSFIFMN-KQQLIEVAMGLVNS----NHPFLWIIRPDLVTGETADLPAEFEVK---A--KEKGFVASWCP-- 333 (465)
Q Consensus 266 ~~~V~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~v~~~~p-- 333 (465)
++.|+++.|...+.. .+.+..+++++... +..+|+..... ..+.+.+. . .+++++.+.++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~--------~~~~l~~~~~~~~~~~~v~l~~~lg~~ 274 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR--------TKKRLEDLEGFKELGDKIRFLPAFSFT 274 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH--------HHHHHHTSGGGGGTGGGEEECCCCCHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH--------HHHHHHHHHHHhcCCCCEEEEcCCCHH
Confidence 458888887754333 24566677776542 56677665421 11111111 1 24677765554
Q ss_pred -hhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhc
Q 012342 334 -QEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 412 (465)
Q Consensus 334 -~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~ 412 (465)
...++.++++ +|+-.|. .+.||...|+|+|+++...+.+. .+ + .|.++.+. .+.++|.+++.++++
T Consensus 275 ~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-~-~G~~~lv~-----~d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 275 DYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM-D-AGTLIMSG-----FKAERVLQAVKTITE 341 (385)
T ss_dssp HHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH-H-HTCCEECC-----SSHHHHHHHHHHHHT
T ss_pred HHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh-h-cCceEEcC-----CCHHHHHHHHHHHHh
Confidence 4569999999 9999876 46999999999999987654222 13 3 47665552 279999999999998
Q ss_pred CChH-HHHHHHHHHHHHHHHHHh-CCCCchHHHHHHHHHHH
Q 012342 413 GEKG-KQMRNKAMEWKGLAEEAA-APHGSSSLNLDKLVNEI 451 (465)
Q Consensus 413 ~~~~-~~~~~~a~~l~~~~~~~~-~~~g~~~~~~~~~~~~~ 451 (465)
|+.. +.+++++. .+ +.|+++++.++.+.+.+
T Consensus 342 d~~~~~~m~~~~~--------~~~g~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 342 EHDNNKRTQGLVP--------DYNEAGLVSKKILRIVLSYV 374 (385)
T ss_dssp TCBTTBCCSCCCH--------HHHTCCCHHHHHHHHHHHHH
T ss_pred ChHHHHHhhccCC--------CCCCCChHHHHHHHHHHHHh
Confidence 8751 01212222 13 45677766555554433
No 36
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.07 E-value=6.3e-06 Score=80.79 Aligned_cols=129 Identities=13% Similarity=0.147 Sum_probs=81.7
Q ss_pred CceeEEeeccccCCCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCCCcCCCchhHHHHh--ccCceEeeccCh---h
Q 012342 266 KSVIYVNFGSFIFMNKQQLIEVAMGLVN-----SNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFVASWCPQ---E 335 (465)
Q Consensus 266 ~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~p~---~ 335 (465)
++.|+++.|...... .+..+++++.. .+..+++..+.+.. +.+.+.+.. .+++.+.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~------~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPV------VREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHH------HHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHH------HHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 457777777553221 23444455432 24455554443210 112222211 247888865554 4
Q ss_pred hhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCCh
Q 012342 336 EVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEK 415 (465)
Q Consensus 336 ~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~ 415 (465)
.++..+++ ||+..| |.+.||+++|+|+|+.+...+++.. + + .|.|+.+ . .+.++|.++|.++++|++
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~-~g~g~lv----~-~d~~~la~~i~~ll~d~~ 336 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-K-AGILKLA----G-TDPEGVYRVVKGLLENPE 336 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-H-HTSEEEC----C-SCHHHHHHHHHHHHTCHH
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-c-CCceEEC----C-CCHHHHHHHHHHHHhChH
Confidence 79999999 999884 4466999999999998876776663 3 3 4677666 3 289999999999998875
No 37
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.04 E-value=8.2e-06 Score=80.10 Aligned_cols=131 Identities=14% Similarity=0.136 Sum_probs=83.1
Q ss_pred CCceeEEeeccccCCCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCCCcCCCchhHHHHh--ccCceEeeccCh---
Q 012342 265 PKSVIYVNFGSFIFMNKQQLIEVAMGLVN-----SNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFVASWCPQ--- 334 (465)
Q Consensus 265 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~p~--- 334 (465)
+++.|+++.|+...... .+..+++++.. .+..+++..+.+.. +.+.+.+.. .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~~------~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLNPN------VREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCHH------HHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCHH------HHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 34578888887654322 33444444432 24455553332200 111222211 257888766664
Q ss_pred hhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCC
Q 012342 335 EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 414 (465)
Q Consensus 335 ~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~ 414 (465)
..++..+++ ||+..|. .++||+++|+|+|+.+...+.... + + .|.|+.+. . +.++|.++|.++++|+
T Consensus 277 ~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~e~---v-~-~g~g~lv~----~-d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPEA---V-T-AGTVRLVG----T-DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCHHH---H-H-HTSEEEEC----S-SHHHHHHHHHHHHHCH
T ss_pred HHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcchh---h-h-CCceEEeC----C-CHHHHHHHHHHHHhCh
Confidence 458999999 9998854 488999999999999875443332 2 3 36887773 3 8999999999999887
Q ss_pred h
Q 012342 415 K 415 (465)
Q Consensus 415 ~ 415 (465)
+
T Consensus 344 ~ 344 (384)
T 1vgv_A 344 N 344 (384)
T ss_dssp H
T ss_pred H
Confidence 5
No 38
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=97.93 E-value=1.4e-05 Score=79.34 Aligned_cols=160 Identities=11% Similarity=0.117 Sum_probs=95.4
Q ss_pred CCceeEEeeccccCCCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCCCcCCCchhHHHH--hccCceEeeccCh---
Q 012342 265 PKSVIYVNFGSFIFMNKQQLIEVAMGLVN-----SNHPFLWIIRPDLVTGETADLPAEFEVK--AKEKGFVASWCPQ--- 334 (465)
Q Consensus 265 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~p~--- 334 (465)
+++.++++.|....... .+..+++++.. .+.++|+..+.+.. +.+.+.+. ..+++.+.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~------~~~~l~~~~~~~~~v~l~~~l~~~~~ 295 (403)
T 3ot5_A 223 DNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLNPA------VREKAMAILGGHERIHLIEPLDAIDF 295 (403)
T ss_dssp TCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCHH------HHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCCHH------HHHHHHHHhCCCCCEEEeCCCCHHHH
Confidence 34577777654322111 23445555432 34566665443210 11111111 1357888888863
Q ss_pred hhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCC
Q 012342 335 EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 414 (465)
Q Consensus 335 ~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~ 414 (465)
..++.++++ +|+..|..+ .||.++|+|+|+.|-..+++.. + + .|.|+.+ +. +.++|.++|.++++|+
T Consensus 296 ~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e~---v-~-~g~~~lv----~~-d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 296 HNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPEG---I-E-AGTLKLI----GT-NKENLIKEALDLLDNK 362 (403)
T ss_dssp HHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHHH---H-H-HTSEEEC----CS-CHHHHHHHHHHHHHCH
T ss_pred HHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchhh---e-e-CCcEEEc----CC-CHHHHHHHHHHHHcCH
Confidence 458889998 998875333 7999999999999766666542 3 3 4777666 32 7999999999999887
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 012342 415 KGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEI 451 (465)
Q Consensus 415 ~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 451 (465)
+ .+++.. +..+ .++.++++++.++.+.+.+
T Consensus 363 ~---~~~~m~---~~~~-~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 363 E---SHDKMA---QAAN-PYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp H---HHHHHH---HSCC-TTCCSCHHHHHHHHHHHHH
T ss_pred H---HHHHHH---hhcC-cccCCcHHHHHHHHHHHHh
Confidence 5 333322 2222 2355666666655555544
No 39
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=97.72 E-value=5.8e-05 Score=73.66 Aligned_cols=79 Identities=16% Similarity=0.159 Sum_probs=59.7
Q ss_pred cCceEeeccChh---hhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCH
Q 012342 324 EKGFVASWCPQE---EVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIR 400 (465)
Q Consensus 324 ~~~~v~~~~p~~---~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~ 400 (465)
+++.+.+++++. .++..+++ ||+..| +.+.||+++|+|+|+.......+. .+ + .|.|+.+ .. +.
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~e---~v-~-~g~g~~v----~~-d~ 329 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERPE---GI-E-AGTLKLA----GT-DE 329 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCHH---HH-H-TTSEEEC----CS-CH
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCce---ee-c-CCceEEc----CC-CH
Confidence 578887777653 58899999 998874 558899999999999854333322 23 3 3677766 33 89
Q ss_pred HHHHHHHHHHhcCCh
Q 012342 401 NEVEKLVREMMEGEK 415 (465)
Q Consensus 401 ~~l~~ai~~~l~~~~ 415 (465)
+++.++|.++++|++
T Consensus 330 ~~la~~i~~ll~~~~ 344 (375)
T 3beo_A 330 ETIFSLADELLSDKE 344 (375)
T ss_dssp HHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHhChH
Confidence 999999999998865
No 40
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.67 E-value=0.0004 Score=59.18 Aligned_cols=139 Identities=12% Similarity=0.113 Sum_probs=81.5
Q ss_pred ceeEEeeccccCCCHHHHHHHHHHHHhC----CCCEEEEEcCCCCCCCcCCCchhHHH---HhccCceEeeccChh---h
Q 012342 267 SVIYVNFGSFIFMNKQQLIEVAMGLVNS----NHPFLWIIRPDLVTGETADLPAEFEV---KAKEKGFVASWCPQE---E 336 (465)
Q Consensus 267 ~~V~vs~GS~~~~~~~~~~~~~~al~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~p~~---~ 336 (465)
+++++..|+... .+.+..+++++... +.++++ +|.+. ..+.+.+ +.+-++.+ +|+|+. .
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i-~G~g~-------~~~~~~~~~~~~~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLL-KGKGP-------DEKKIKLLAQKLGVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEE-ECCST-------THHHHHHHHHHHTCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEE-EeCCc-------cHHHHHHHHHHcCCeEEE-eecCHHHHHH
Confidence 467788888753 23345556666554 223333 34321 2223322 23336777 999874 4
Q ss_pred hhcCCCcceeee----cCCchhHHHHHhcCC-cEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHh
Q 012342 337 VLKHPSIGGFLT----HCGWNSIVESLCSGV-PMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 411 (465)
Q Consensus 337 ~l~~~~~~~~i~----hgG~~s~~eal~~Gv-P~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l 411 (465)
++..+++ +|. -|.-.++.||+++|+ |+|+..... .....+ +..+. .+ ..-+.+++.++|.+++
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~-~~~~~--~~----~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFA-LDERS--LF----EPNNAKDLSAKIDWWL 138 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGC-SSGGG--EE----CTTCHHHHHHHHHHHH
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhc-cCCce--EE----cCCCHHHHHHHHHHHH
Confidence 8889998 665 233458999999996 999933211 222222 33233 23 3347999999999999
Q ss_pred cCCh-HHHHHHHHHHHHH
Q 012342 412 EGEK-GKQMRNKAMEWKG 428 (465)
Q Consensus 412 ~~~~-~~~~~~~a~~l~~ 428 (465)
+|++ -+++.+++++..+
T Consensus 139 ~~~~~~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 139 ENKLERERMQNEYAKSAL 156 (166)
T ss_dssp HCHHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHH
Confidence 8775 2345555555443
No 41
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.50 E-value=0.0016 Score=64.33 Aligned_cols=166 Identities=13% Similarity=0.039 Sum_probs=95.8
Q ss_pred ceeEEeeccccC-CCHHHHHHHHHHHHh--CCCCEEEEEcCCCCCCCcCCCchhHHHH--hccCceEeeccC---h---h
Q 012342 267 SVIYVNFGSFIF-MNKQQLIEVAMGLVN--SNHPFLWIIRPDLVTGETADLPAEFEVK--AKEKGFVASWCP---Q---E 335 (465)
Q Consensus 267 ~~V~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~p---~---~ 335 (465)
..+++..|.... ...+.+.+.+..+.+ .+.+++++..+.....+....-..+.+. ..+++.+.+|++ + .
T Consensus 231 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~ 310 (416)
T 2x6q_A 231 KPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVN 310 (416)
T ss_dssp SCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHH
T ss_pred CcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHH
Confidence 466777788753 344554444444433 2556665544321000000000112222 236888888876 2 3
Q ss_pred hhhcCCCcceeeecC----CchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHh
Q 012342 336 EVLKHPSIGGFLTHC----GWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 411 (465)
Q Consensus 336 ~~l~~~~~~~~i~hg----G~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l 411 (465)
.++..+++ +|.-. .-+++.||+++|+|+|+.+. ..+...+ +..+.|+.+ + +.+++.++|.+++
T Consensus 311 ~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~----~--d~~~la~~i~~ll 377 (416)
T 2x6q_A 311 AFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLV----R--DANEAVEVVLYLL 377 (416)
T ss_dssp HHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEE----S--SHHHHHHHHHHHH
T ss_pred HHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEE----C--CHHHHHHHHHHHH
Confidence 47888998 77544 45689999999999999764 4455555 555677777 5 7899999999999
Q ss_pred cCCh-HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHH
Q 012342 412 EGEK-GKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEIL 452 (465)
Q Consensus 412 ~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 452 (465)
+|++ -+++.++|++.. ++ .=+.+...+++.+.+.
T Consensus 378 ~~~~~~~~~~~~a~~~~---~~----~fs~~~~~~~~~~~~~ 412 (416)
T 2x6q_A 378 KHPEVSKEMGAKAKERV---RK----NFIITKHMERYLDILN 412 (416)
T ss_dssp HCHHHHHHHHHHHHHHH---HH----HTBHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHH---HH----HcCHHHHHHHHHHHHH
Confidence 8875 122334444332 21 1234455555555544
No 42
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.48 E-value=0.0026 Score=55.71 Aligned_cols=140 Identities=14% Similarity=0.110 Sum_probs=84.0
Q ss_pred eeEEeecccc-C-CCHHHHHHHHHHHH--hC--CCCEEEEEcCCCCCCCcCCCchhHHH---HhccCceE-eeccChh--
Q 012342 268 VIYVNFGSFI-F-MNKQQLIEVAMGLV--NS--NHPFLWIIRPDLVTGETADLPAEFEV---KAKEKGFV-ASWCPQE-- 335 (465)
Q Consensus 268 ~V~vs~GS~~-~-~~~~~~~~~~~al~--~~--~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v-~~~~p~~-- 335 (465)
.+++.+|+.. . ...+.+.+.+..+. .. +.+++++ |... .. ..+.+.+ +.+ ++.+ .+++++.
T Consensus 37 ~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~-G~~~-~~----~~~~l~~~~~~~~-~v~~~~g~~~~~~~ 109 (200)
T 2bfw_A 37 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGD-PE----LEGWARSLEEKHG-NVKVITEMLSREFV 109 (200)
T ss_dssp EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEE-CCBC-HH----HHHHHHHHHHHCT-TEEEECSCCCHHHH
T ss_pred CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEE-CCCC-hH----HHHHHHHHHHhcC-CEEEEeccCCHHHH
Confidence 4677778876 3 34555555555553 22 3344443 3221 00 0122222 222 8888 9999853
Q ss_pred -hhhcCCCcceeeecC---C-chhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHH
Q 012342 336 -EVLKHPSIGGFLTHC---G-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 410 (465)
Q Consensus 336 -~~l~~~~~~~~i~hg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~ 410 (465)
.++..+++ +|.-. | -.++.||+++|+|+|+.... .+...+ ..+.|+.+. .-+.+++.++|.++
T Consensus 110 ~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~----~~~~~~l~~~i~~l 177 (200)
T 2bfw_A 110 RELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVK----AGDPGELANAILKA 177 (200)
T ss_dssp HHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEEC----TTCHHHHHHHHHHH
T ss_pred HHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEec----CCCHHHHHHHHHHH
Confidence 58889998 66432 3 46789999999999987542 333333 335566663 34789999999999
Q ss_pred hc-CCh-HHHHHHHHHHH
Q 012342 411 ME-GEK-GKQMRNKAMEW 426 (465)
Q Consensus 411 l~-~~~-~~~~~~~a~~l 426 (465)
++ |++ -+++.++|++.
T Consensus 178 ~~~~~~~~~~~~~~a~~~ 195 (200)
T 2bfw_A 178 LELSRSDLSKFRENCKKR 195 (200)
T ss_dssp HHCCHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHH
Confidence 98 875 12344444443
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.32 E-value=0.0042 Score=64.08 Aligned_cols=84 Identities=12% Similarity=0.134 Sum_probs=57.8
Q ss_pred cCceEeeccChh---hhhcCCCcceeee---cCCchhHHHHHhcCCcEEecCCCCChhhH-HHhhcccceeEEEEecCCC
Q 012342 324 EKGFVASWCPQE---EVLKHPSIGGFLT---HCGWNSIVESLCSGVPMICWPFTGDQPTN-GRYVCNEWGVGMEINGDDE 396 (465)
Q Consensus 324 ~~~~v~~~~p~~---~~l~~~~~~~~i~---hgG~~s~~eal~~GvP~i~~P~~~DQ~~n-a~~~~~~~g~g~~~~~~~~ 396 (465)
+++.+.+++|+. .++..+++ ||. .|+.++++||+++|+|+|++|-..-.... +..+ ...|+.-.+. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~---~ 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNV---A 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBC---S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhc---C
Confidence 678889999854 57889998 762 25667899999999999998753111111 2222 3334432232 2
Q ss_pred CCCHHHHHHHHHHHhcCCh
Q 012342 397 DVIRNEVEKLVREMMEGEK 415 (465)
Q Consensus 397 ~~~~~~l~~ai~~~l~~~~ 415 (465)
+.+++.++|.++++|++
T Consensus 508 --~~~~la~~i~~l~~~~~ 524 (568)
T 2vsy_A 508 --DDAAFVAKAVALASDPA 524 (568)
T ss_dssp --SHHHHHHHHHHHHHCHH
T ss_pred --CHHHHHHHHHHHhcCHH
Confidence 78999999999998875
No 44
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.23 E-value=0.0013 Score=64.49 Aligned_cols=98 Identities=20% Similarity=0.321 Sum_probs=68.5
Q ss_pred CceEeeccCh-hhhhcCCCcceeeec-----CCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCC
Q 012342 325 KGFVASWCPQ-EEVLKHPSIGGFLTH-----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDV 398 (465)
Q Consensus 325 ~~~v~~~~p~-~~~l~~~~~~~~i~h-----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 398 (465)
++++.++..+ ..++..+++ |+.- +|..+++||+++|+|+|+-|...+.......+ .+.|.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEeC------
Confidence 3455555444 458888887 6542 24478999999999999877777777766655 3457766552
Q ss_pred CHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 012342 399 IRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAE 431 (465)
Q Consensus 399 ~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~ 431 (465)
+.+++.++|.++++|+.-++|.++|++..+.-.
T Consensus 332 d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 NETELVTKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp SHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 579999999999987212347777777765543
No 45
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.08 E-value=0.003 Score=65.07 Aligned_cols=140 Identities=11% Similarity=0.034 Sum_probs=88.8
Q ss_pred ceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEE--EcCCCCCCCcCCCchhHH-HHhccCceEeeccChhh---hhcC
Q 012342 267 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWI--IRPDLVTGETADLPAEFE-VKAKEKGFVASWCPQEE---VLKH 340 (465)
Q Consensus 267 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~p~~~---~l~~ 340 (465)
.++|.+|++.....++.+....+-+++.+..++|. .+..... ...+-..+. ..+.+++.+.+.+|+.+ .+..
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~--~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~ 518 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI--THPYVERFIKSYLGDSATAHPHSPYHQYLRILHN 518 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG--GHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHT
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh--hHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhc
Confidence 58899999887778888888888888887777764 3422110 000111111 13456777888888755 5578
Q ss_pred CCcceeee---cCCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEE-EecCCCCCCHHHHHHHHHHHhcCCh
Q 012342 341 PSIGGFLT---HCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGME-INGDDEDVIRNEVEKLVREMMEGEK 415 (465)
Q Consensus 341 ~~~~~~i~---hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~~~~~~~~l~~ai~~~l~~~~ 415 (465)
+|+ |+. .+|..|++||+++|||+|+++-..=--..+..+-...|+.-. +. -+.++..+...++.+|++
T Consensus 519 aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA-----~d~eeYv~~Av~La~D~~ 590 (631)
T 3q3e_A 519 CDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA-----NTVDEYVERAVRLAENHQ 590 (631)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE-----SSHHHHHHHHHHHHHCHH
T ss_pred CcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec-----CCHHHHHHHHHHHhCCHH
Confidence 888 653 378899999999999999988643211222221134455321 22 257777777778888875
No 46
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.02 E-value=0.0059 Score=60.11 Aligned_cols=136 Identities=11% Similarity=0.076 Sum_probs=77.6
Q ss_pred CceeEEeeccccC-CCHHHHHHHHHHHHh--CCCCEEEEEcCCCCCCCcCCCchhHHH---H--hccC-------ceEee
Q 012342 266 KSVIYVNFGSFIF-MNKQQLIEVAMGLVN--SNHPFLWIIRPDLVTGETADLPAEFEV---K--AKEK-------GFVAS 330 (465)
Q Consensus 266 ~~~V~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~---~--~~~~-------~~v~~ 330 (465)
+..+++..|+... ...+.+.+.+..+.+ .+.+++++..+..... ..+.+.+.+ . +.++ +.+.+
T Consensus 183 ~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~--~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 183 DDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESK--FDLHSIALRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp TSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCS--CCHHHHHHHHHHHHTCSCHHHHHTTEEEECS
T ss_pred CceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccch--hhHHHHHHHHHHHcCcccccccccceeeccC
Confidence 3477888888642 233444443333322 3567766655432110 001122222 1 2232 55579
Q ss_pred ccChh---hhhcCCCcceeee----cCCchhHHHHHhcCCcEEecCCCCChhhHHHhhccccee---------------E
Q 012342 331 WCPQE---EVLKHPSIGGFLT----HCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGV---------------G 388 (465)
Q Consensus 331 ~~p~~---~~l~~~~~~~~i~----hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~---------------g 388 (465)
|+|+. .++..+++ +|. -|.-.++.||+++|+|+|+.... .....+ +.-.. |
T Consensus 261 ~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v-~~~~~~~i~~~~~~~~~~~~G 333 (413)
T 3oy2_A 261 VLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF-SGDCVYKIKPSAWISVDDRDG 333 (413)
T ss_dssp CCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS-CTTTSEEECCCEEEECTTTCS
T ss_pred cCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH-ccCcccccccccccccccccC
Confidence 99854 47888998 663 23345899999999999996542 333333 22111 3
Q ss_pred E--EEecCCCCCCHHHHHHHHHHHhcCCh
Q 012342 389 M--EINGDDEDVIRNEVEKLVREMMEGEK 415 (465)
Q Consensus 389 ~--~~~~~~~~~~~~~l~~ai~~~l~~~~ 415 (465)
+ .+.. -+.+++.++| ++++|++
T Consensus 334 ~~gl~~~----~d~~~la~~i-~l~~~~~ 357 (413)
T 3oy2_A 334 IGGIEGI----IDVDDLVEAF-TFFKDEK 357 (413)
T ss_dssp SCCEEEE----CCHHHHHHHH-HHTTSHH
T ss_pred cceeeCC----CCHHHHHHHH-HHhcCHH
Confidence 3 4432 3899999999 9998865
No 47
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.94 E-value=0.018 Score=57.95 Aligned_cols=162 Identities=9% Similarity=0.018 Sum_probs=96.2
Q ss_pred ceeEEeeccccC-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhH---HHHhccCce-EeeccChh--hhhc
Q 012342 267 SVIYVNFGSFIF-MNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEF---EVKAKEKGF-VASWCPQE--EVLK 339 (465)
Q Consensus 267 ~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-v~~~~p~~--~~l~ 339 (465)
..+++..|+... ...+.+.+.+..+.+.+.+++++-.+... +.+.+ ..+.++++. +.++.... .++.
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~------~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 364 (485)
T 1rzu_A 291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVA------LEGALLAAASRHHGRVGVAIGYNEPLSHLMQA 364 (485)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHH------HHHHHHHHHHHTTTTEEEEESCCHHHHHHHHH
T ss_pred CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchH------HHHHHHHHHHhCCCcEEEecCCCHHHHHHHHh
Confidence 357778888763 33455555555554446666665443200 11222 223346776 57773332 5888
Q ss_pred CCCcceeeec----CCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccc---------eeEEEEecCCCCCCHHHHHHH
Q 012342 340 HPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEW---------GVGMEINGDDEDVIRNEVEKL 406 (465)
Q Consensus 340 ~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~---------g~g~~~~~~~~~~~~~~l~~a 406 (465)
.+++ ||.- |--.+++||+++|+|+|+... ..+...+ +.. +.|+.+. .-+.+++.++
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~----~~d~~~la~~ 433 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFS----PVTLDGLKQA 433 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEES----SCSHHHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeC----CCCHHHHHHH
Confidence 9998 7632 334689999999999999654 3455555 543 5777774 3478999999
Q ss_pred HHHHh---cCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012342 407 VREMM---EGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 454 (465)
Q Consensus 407 i~~~l---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 454 (465)
|.+++ +|++ .++ ++++..++ +.=+.+...+++.+.+.+.
T Consensus 434 i~~ll~~~~~~~---~~~---~~~~~~~~---~~fs~~~~~~~~~~~y~~~ 475 (485)
T 1rzu_A 434 IRRTVRYYHDPK---LWT---QMQKLGMK---SDVSWEKSAGLYAALYSQL 475 (485)
T ss_dssp HHHHHHHHTCHH---HHH---HHHHHHHT---CCCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHH---HHH---HHHHHHHH---HhCChHHHHHHHHHHHHHh
Confidence 99999 6654 222 22222221 3445555566666555443
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.79 E-value=0.022 Score=60.56 Aligned_cols=103 Identities=19% Similarity=0.308 Sum_probs=74.3
Q ss_pred CCCceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHH-H-hccCceEeeccChhh---hh
Q 012342 264 EPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEV-K-AKEKGFVASWCPQEE---VL 338 (465)
Q Consensus 264 ~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~v~~~~p~~~---~l 338 (465)
+++.+||.||-+..-.+++.+..-++-|++.+...||....+.... ..+-..+.. . .++++.+.+..|..+ .+
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~--~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~ 597 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--PNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRG 597 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGH--HHHHHHHHHTTCCGGGEEEEECCCHHHHHHHG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHH--HHHHHHHHhcCCCcCeEEECCCCCHHHHHHHh
Confidence 3456999999888888999999999999999999999987543110 001111111 0 135677778887644 55
Q ss_pred cCCCcceeee---cCCchhHHHHHhcCCcEEecCC
Q 012342 339 KHPSIGGFLT---HCGWNSIVESLCSGVPMICWPF 370 (465)
Q Consensus 339 ~~~~~~~~i~---hgG~~s~~eal~~GvP~i~~P~ 370 (465)
...|+ ++- .+|.+|+.|||+.|||+|+++-
T Consensus 598 ~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g 630 (723)
T 4gyw_A 598 QLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPG 630 (723)
T ss_dssp GGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCC
T ss_pred CCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccC
Confidence 67777 765 8899999999999999999994
No 49
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.79 E-value=0.024 Score=57.06 Aligned_cols=163 Identities=10% Similarity=0.014 Sum_probs=95.6
Q ss_pred CceeEEeecccc-CCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhH---HHHhccCce-EeeccChh--hhh
Q 012342 266 KSVIYVNFGSFI-FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEF---EVKAKEKGF-VASWCPQE--EVL 338 (465)
Q Consensus 266 ~~~V~vs~GS~~-~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-v~~~~p~~--~~l 338 (465)
+..+++..|... ....+.+.+.+..+.+.+.+++++-.+... +.+.+ ....++++. +.++.... .++
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~------~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 364 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPV------LQEGFLAAAAEYPGQVGVQIGYHEAFSHRIM 364 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHH------HHHHHHHHHHHSTTTEEEEESCCHHHHHHHH
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchH------HHHHHHHHHHhCCCcEEEeCCCCHHHHHHHH
Confidence 346777778765 234455555555554446666665443200 11222 223346775 67774332 588
Q ss_pred cCCCcceeeec----CCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccc---------eeEEEEecCCCCCCHHHHHH
Q 012342 339 KHPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEW---------GVGMEINGDDEDVIRNEVEK 405 (465)
Q Consensus 339 ~~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~---------g~g~~~~~~~~~~~~~~l~~ 405 (465)
..+++ ||.- |--++++||+++|+|+|+... ..+...+ +.- +.|+.+. .-+.+++.+
T Consensus 365 ~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~----~~d~~~la~ 433 (485)
T 2qzs_A 365 GGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFE----DSNAWSLLR 433 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEEC----SSSHHHHHH
T ss_pred HhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEEC----CCCHHHHHH
Confidence 99998 6632 334578899999999999754 3455555 543 5777774 347999999
Q ss_pred HHHHHh---cCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012342 406 LVREMM---EGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 454 (465)
Q Consensus 406 ai~~~l---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 454 (465)
+|.+++ +|++ .+++ +++..++ +.-+-+..++++.+.+.+.
T Consensus 434 ~i~~ll~~~~~~~---~~~~---~~~~~~~---~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 434 AIRRAFVLWSRPS---LWRF---VQRQAMA---MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp HHHHHHHHHTSHH---HHHH---HHHHHHH---CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHH---HHHH---HHHHHHh---hcCCHHHHHHHHHHHHHHh
Confidence 999999 5654 2222 2222222 3445555556665555443
No 50
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.72 E-value=0.0027 Score=61.19 Aligned_cols=111 Identities=14% Similarity=0.143 Sum_probs=78.9
Q ss_pred CceEeeccChhhh---hcCCCcceeeecCCc---------hhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEe
Q 012342 325 KGFVASWCPQEEV---LKHPSIGGFLTHCGW---------NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEIN 392 (465)
Q Consensus 325 ~~~v~~~~p~~~~---l~~~~~~~~i~hgG~---------~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~ 392 (465)
|+...+|+|+.++ |..++.+++..-+.+ +-+.|++++|+|+|+.+ ...++..+ ++.++|+.+.
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 8999999999764 555566555433323 34789999999999865 34566666 7789999883
Q ss_pred cCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 012342 393 GDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEI 451 (465)
Q Consensus 393 ~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 451 (465)
+.+++.++|.++.. +.-++|++||++.+++++. |-...+.+.+.+.++
T Consensus 290 ------~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ------DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp ------SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 36888888887643 3345699999999998884 455666666555443
No 51
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=95.50 E-value=0.16 Score=54.54 Aligned_cols=93 Identities=11% Similarity=0.131 Sum_probs=59.6
Q ss_pred ccCceEeec----cChhhhhc----CCCcceeeec----CCchhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEE
Q 012342 323 KEKGFVASW----CPQEEVLK----HPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGME 390 (465)
Q Consensus 323 ~~~~~v~~~----~p~~~~l~----~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~ 390 (465)
.+++.+.++ +|+.++.. .+++ ||.- |--.++.||+++|+|+|+. |-......+ +.-+.|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEE
Confidence 367777774 44444443 4566 7643 3345899999999999996 344455555 55566777
Q ss_pred EecCCCCCCHHHHHHHHHHHh----cCCh-HHHHHHHHHHH
Q 012342 391 INGDDEDVIRNEVEKLVREMM----EGEK-GKQMRNKAMEW 426 (465)
Q Consensus 391 ~~~~~~~~~~~~l~~ai~~~l----~~~~-~~~~~~~a~~l 426 (465)
+. .-+.+++.++|.+++ .|++ .+++.++|++.
T Consensus 712 v~----p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~ 748 (816)
T 3s28_A 712 ID----PYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQR 748 (816)
T ss_dssp EC----TTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred eC----CCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 74 347899999997776 6765 22344444443
No 52
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=94.91 E-value=0.16 Score=49.88 Aligned_cols=115 Identities=14% Similarity=0.074 Sum_probs=74.4
Q ss_pred eeEEeeccccCCCHHHHHHHHHHHHh--CCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChh---hhhcCCC
Q 012342 268 VIYVNFGSFIFMNKQQLIEVAMGLVN--SNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQE---EVLKHPS 342 (465)
Q Consensus 268 ~V~vs~GS~~~~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~---~~l~~~~ 342 (465)
.+++..|+... .... +.++.+ .+.+++++ |.+.. ..+ .+.+++.+.+++|+. .++..++
T Consensus 223 ~~i~~vGrl~~-~Kg~----~~~l~~~~~~~~l~iv-G~g~~----~~~------~l~~~V~f~G~~~~~~l~~~~~~ad 286 (406)
T 2hy7_A 223 IHAVAVGSMLF-DPEF----FVVASKAFPQVTFHVI-GSGMG----RHP------GYGDNVIVYGEMKHAQTIGYIKHAR 286 (406)
T ss_dssp EEEEEECCTTB-CHHH----HHHHHHHCTTEEEEEE-SCSSC----CCT------TCCTTEEEECCCCHHHHHHHHHTCS
T ss_pred cEEEEEecccc-ccCH----HHHHHHhCCCeEEEEE-eCchH----Hhc------CCCCCEEEcCCCCHHHHHHHHHhcC
Confidence 66777788763 3333 333322 23444444 43320 001 135789999999865 4788999
Q ss_pred cceeee---cCC-chhHHHHH-------hcCCcEEecCCCCChhhHHHhhcccceeEEE-EecCCCCCCHHHHHHHHHHH
Q 012342 343 IGGFLT---HCG-WNSIVESL-------CSGVPMICWPFTGDQPTNGRYVCNEWGVGME-INGDDEDVIRNEVEKLVREM 410 (465)
Q Consensus 343 ~~~~i~---hgG-~~s~~eal-------~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~~~~~~~~l~~ai~~~ 410 (465)
+ ||. +-| -+++.||+ ++|+|+|+... + ..-..|+. +. .-+.+++.++|.++
T Consensus 287 v--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G~l~v~----~~d~~~la~ai~~l 349 (406)
T 2hy7_A 287 F--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKSRFGYT----PGNADSVIAAITQA 349 (406)
T ss_dssp E--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSSEEEEC----TTCHHHHHHHHHHH
T ss_pred E--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcceEEEeC----CCCHHHHHHHHHHH
Confidence 8 653 234 45688999 99999999765 4 43345655 53 34789999999999
Q ss_pred hcCCh
Q 012342 411 MEGEK 415 (465)
Q Consensus 411 l~~~~ 415 (465)
++|+.
T Consensus 350 l~~~~ 354 (406)
T 2hy7_A 350 LEAPR 354 (406)
T ss_dssp HHCCC
T ss_pred HhCcc
Confidence 98764
No 53
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.81 E-value=0.068 Score=52.79 Aligned_cols=81 Identities=14% Similarity=-0.015 Sum_probs=58.0
Q ss_pred ccCceEeeccChh---hhhcCCCcceeeec---CCc-hhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCC
Q 012342 323 KEKGFVASWCPQE---EVLKHPSIGGFLTH---CGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDD 395 (465)
Q Consensus 323 ~~~~~v~~~~p~~---~~l~~~~~~~~i~h---gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 395 (465)
.+++.+.+++|+. .++..+++ ||.- =|. .+++||+++|+|+|+ -..+ ....+ +.-..|+.+.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~--- 362 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLE--- 362 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEES---
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeC---
Confidence 3578889999875 47888998 6642 133 467999999999998 3222 22333 4434677774
Q ss_pred CCCCHHHHHHHHHHHhcCCh
Q 012342 396 EDVIRNEVEKLVREMMEGEK 415 (465)
Q Consensus 396 ~~~~~~~l~~ai~~~l~~~~ 415 (465)
.-+.+++.++|.++++|++
T Consensus 363 -~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 363 -QLNPENIAETLVELCMSFN 381 (413)
T ss_dssp -SCSHHHHHHHHHHHHHHTC
T ss_pred -CCCHHHHHHHHHHHHcCHH
Confidence 3478999999999998876
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.73 E-value=0.17 Score=51.73 Aligned_cols=137 Identities=11% Similarity=0.026 Sum_probs=79.8
Q ss_pred CceeEEeecccc-CCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChh---hhhcCC
Q 012342 266 KSVIYVNFGSFI-FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQE---EVLKHP 341 (465)
Q Consensus 266 ~~~V~vs~GS~~-~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~---~~l~~~ 341 (465)
+.++++..|... ....+.+.+.+..+.+.+.+++++..++... ...-.......+.++.+....+.. .++..+
T Consensus 326 ~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 402 (536)
T 3vue_A 326 KIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKF---EKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGA 402 (536)
T ss_dssp TSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHH---HHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHC
T ss_pred CCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchH---HHHHHHHHhhcCCceEEEEeccHHHHHHHHHhh
Confidence 346677778875 2344555555555555667766654433100 000011223446778887777664 378888
Q ss_pred Ccceeeec---CCc-hhHHHHHhcCCcEEecCCCCChhhHHHhhcccceeEEEEecCC------CCCCHHHHHHHHHHHh
Q 012342 342 SIGGFLTH---CGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDD------EDVIRNEVEKLVREMM 411 (465)
Q Consensus 342 ~~~~~i~h---gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~------~~~~~~~l~~ai~~~l 411 (465)
++ ||.- =|+ .+++||+++|+|+|+-.. ......| +.-..|....... +..+.++|.++|+++|
T Consensus 403 D~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral 475 (536)
T 3vue_A 403 DV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAI 475 (536)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHH
T ss_pred he--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchhee-eCCCCccccccCCCceeEECCCCHHHHHHHHHHHH
Confidence 88 7643 133 488999999999998654 3444444 4434454332210 2235788999999887
Q ss_pred c
Q 012342 412 E 412 (465)
Q Consensus 412 ~ 412 (465)
.
T Consensus 476 ~ 476 (536)
T 3vue_A 476 K 476 (536)
T ss_dssp H
T ss_pred H
Confidence 5
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=91.12 E-value=0.12 Score=52.77 Aligned_cols=38 Identities=8% Similarity=0.222 Sum_probs=30.0
Q ss_pred CCCEEEEEcC--------CCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 9 SKVHAVCIPS--------PFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 9 ~~~~il~~~~--------~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
.+||||++++ |+.|++ .-.|+++|+++||+|++++|.+
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCEEEEEEECC
T ss_pred CCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCeEEEEecCc
Confidence 3899999973 334444 5578999999999999999644
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=87.37 E-value=2.5 Score=39.91 Aligned_cols=45 Identities=11% Similarity=0.158 Sum_probs=39.1
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHh
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLLK 55 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~~ 55 (465)
|||+++.....||+.=...+.+.|.++ +.+|++++.+.+.+.++.
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~ 47 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR 47 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc
Confidence 589999988999999899999999987 999999999877765543
No 57
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=84.62 E-value=1.3 Score=42.42 Aligned_cols=46 Identities=15% Similarity=0.041 Sum_probs=41.0
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHh
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLLK 55 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~~ 55 (465)
..+|+++-....||+.=.+.+.+.|.++ +.+|++++.+.+.+.++.
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~ 55 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY 55 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc
Confidence 6799999999999999999999999997 999999999887765543
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=82.88 E-value=4.2 Score=38.08 Aligned_cols=134 Identities=13% Similarity=0.054 Sum_probs=77.1
Q ss_pred CceeEEeecccc---CCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeecc--Ch-hhhhc
Q 012342 266 KSVIYVNFGSFI---FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWC--PQ-EEVLK 339 (465)
Q Consensus 266 ~~~V~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--p~-~~~l~ 339 (465)
++.|.+..|+.. .++.+.+.++++.|.+.+.++++..++... . ...+.+.+.. .++.+.+-. .+ ..++.
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e---~-~~~~~i~~~~-~~~~l~g~~sl~el~ali~ 252 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHE---E-ERAKRLAEGF-AYVEVLPKMSLEGVARVLA 252 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHH---H-HHHHHHHTTC-TTEEECCCCCHHHHHHHHH
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHH---H-HHHHHHHhhC-CcccccCCCCHHHHHHHHH
Confidence 458888888764 577889999999987778877665443210 0 0001111111 233333332 23 46999
Q ss_pred CCCcceeeec-CCchhHHHHHhcCCcEEec--CCCCChhhHHHhhcccceeEEEEecC-C--CCCCHHHHHHHHHHHhcC
Q 012342 340 HPSIGGFLTH-CGWNSIVESLCSGVPMICW--PFTGDQPTNGRYVCNEWGVGMEINGD-D--EDVIRNEVEKLVREMMEG 413 (465)
Q Consensus 340 ~~~~~~~i~h-gG~~s~~eal~~GvP~i~~--P~~~DQ~~na~~~~~~~g~g~~~~~~-~--~~~~~~~l~~ai~~~l~~ 413 (465)
++++ +|+. .|.-.+ |.+.|+|+|++ |.... .++-.- .. ...+... . ..++.+++.++++++|++
T Consensus 253 ~a~l--~I~~DSG~~Hl--Aaa~g~P~v~lfg~t~p~--~~~P~~-~~---~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 253 GAKF--VVSVDTGLSHL--TAALDRPNITVYGPTDPG--LIGGYG-KN---QMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp TCSE--EEEESSHHHHH--HHHTTCCEEEEESSSCHH--HHCCCS-SS---EEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred hCCE--EEecCCcHHHH--HHHcCCCEEEEECCCChh--hcCCCC-CC---ceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 9999 9998 444333 55699999998 43211 111100 00 0111110 0 578999999999999865
Q ss_pred C
Q 012342 414 E 414 (465)
Q Consensus 414 ~ 414 (465)
-
T Consensus 323 ~ 323 (326)
T 2gt1_A 323 A 323 (326)
T ss_dssp C
T ss_pred h
Confidence 3
No 59
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=81.20 E-value=2.1 Score=41.53 Aligned_cols=41 Identities=17% Similarity=0.076 Sum_probs=33.8
Q ss_pred CCCEEEEEcCC--CCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012342 9 SKVHAVCIPSP--FQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (465)
Q Consensus 9 ~~~~il~~~~~--~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (465)
++|||+++... .-|+-.....|++.|.++||+|++++....
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 37899988764 357888889999999999999998876543
No 60
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=80.52 E-value=0.94 Score=44.45 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCCC-----ccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 9 SKVHAVCIPSPFQ-----SHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 9 ~~~~il~~~~~~~-----GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
.+|||++++.... |=..-...||+.|+++||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 3799999985422 334568999999999999999999853
No 61
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=80.31 E-value=14 Score=37.02 Aligned_cols=111 Identities=9% Similarity=0.024 Sum_probs=70.2
Q ss_pred CceEeeccChh---hhhcCCCcceeee---cCCchh-HHHHHhcC---CcEEecCCCCChhhHHHhhcccceeEEEEecC
Q 012342 325 KGFVASWCPQE---EVLKHPSIGGFLT---HCGWNS-IVESLCSG---VPMICWPFTGDQPTNGRYVCNEWGVGMEINGD 394 (465)
Q Consensus 325 ~~~v~~~~p~~---~~l~~~~~~~~i~---hgG~~s-~~eal~~G---vP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 394 (465)
.+.+.+.+|+. .++..+++ |+. +=|+|- ..|++++| .|+|.--+.+ .+..+ . .-|+.+..
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l-~--~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVL-G--EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHH-G--GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHh-C--CCEEEECC-
Confidence 46667778874 47777888 553 458885 57999996 5665543322 12222 1 13566743
Q ss_pred CCCCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012342 395 DEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 454 (465)
Q Consensus 395 ~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 454 (465)
.+.++++++|.++|+++. ++-+++.+++.+.++ .-+...-.+.|++.|...
T Consensus 423 ---~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 ---FDLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp ---TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhc
Confidence 589999999999998764 123444445544444 245667778888887654
No 62
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=77.96 E-value=15 Score=36.59 Aligned_cols=106 Identities=10% Similarity=0.108 Sum_probs=67.6
Q ss_pred eeccChhh---hhcCCCcceeee---cCCch-hHHHHHhcCC-----cEEecCCCCChhhHHHhhcccceeEEEEecCCC
Q 012342 329 ASWCPQEE---VLKHPSIGGFLT---HCGWN-SIVESLCSGV-----PMICWPFTGDQPTNGRYVCNEWGVGMEINGDDE 396 (465)
Q Consensus 329 ~~~~p~~~---~l~~~~~~~~i~---hgG~~-s~~eal~~Gv-----P~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 396 (465)
.+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--+.+ .+..+ ..|+.+.
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~---- 402 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN---- 402 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC----
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC----
Confidence 57788754 7788888 664 33555 7889999998 666644322 22222 2355664
Q ss_pred CCCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012342 397 DVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 454 (465)
Q Consensus 397 ~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 454 (465)
.-+.+++.++|.++|+++.. ..+++.++..+.+++ -+...-.+.+++.+.+.
T Consensus 403 p~d~~~lA~ai~~lL~~~~~-~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 PYDRDEVAAALDRALTMSLA-ERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp TTCHHHHHHHHHHHHTCCHH-HHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 35789999999999986531 133444444444442 35677788888888765
No 63
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=74.93 E-value=2.7 Score=41.77 Aligned_cols=38 Identities=11% Similarity=0.132 Sum_probs=29.6
Q ss_pred CEEEEEcCC------CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 11 VHAVCIPSP------FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 11 ~~il~~~~~------~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
|||++++.- .-|=-.-...|++.|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 589988752 23445667789999999999999998743
No 64
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=73.86 E-value=3 Score=41.34 Aligned_cols=38 Identities=13% Similarity=0.148 Sum_probs=29.1
Q ss_pred CEEEEEcC---C---CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 11 VHAVCIPS---P---FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 11 ~~il~~~~---~---~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
|||++++. | .-|=-.-...|++.|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 58998875 2 23334556789999999999999999743
No 65
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=71.17 E-value=7.6 Score=33.98 Aligned_cols=45 Identities=9% Similarity=-0.002 Sum_probs=38.4
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLK 55 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~ 55 (465)
+.||++.-.|+.|-+. ...|.+.|.++|++|.++.++.-...+..
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHH
Confidence 5799999999999888 88999999999999999998765555543
No 66
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=68.76 E-value=24 Score=31.10 Aligned_cols=153 Identities=13% Similarity=0.081 Sum_probs=82.4
Q ss_pred hcccCCCCceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhc-cCceEeeccChhhh
Q 012342 259 WLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAK-EKGFVASWCPQEEV 337 (465)
Q Consensus 259 ~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~p~~~~ 337 (465)
|++-.. +.++.|+.|.+. ...++.|.+.|..+.++... +.+.+..-.. .++.+....-+...
T Consensus 26 fl~L~g-k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~---------~~~~l~~l~~~~~i~~i~~~~~~~d 88 (223)
T 3dfz_A 26 MLDLKG-RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT---------VSAEINEWEAKGQLRVKRKKVGEED 88 (223)
T ss_dssp EECCTT-CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS---------CCHHHHHHHHTTSCEEECSCCCGGG
T ss_pred EEEcCC-CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC---------CCHHHHHHHHcCCcEEEECCCCHhH
Confidence 455433 568888776443 34556677778887766542 2333333222 23444333233456
Q ss_pred hcCCCcceeeecCCchhHHHHHhcCCcEEecCC-CCChhhHHH-----hhcccceeEEEEecCC-CCCCHHHHHHHHHHH
Q 012342 338 LKHPSIGGFLTHCGWNSIVESLCSGVPMICWPF-TGDQPTNGR-----YVCNEWGVGMEINGDD-EDVIRNEVEKLVREM 410 (465)
Q Consensus 338 l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~-~~DQ~~na~-----~~~~~~g~g~~~~~~~-~~~~~~~l~~ai~~~ 410 (465)
|..+++ +|.--|--.+.+.++.-.- ..+|+ ..|.+..+. .+ ++-++-+.+.++. .-.-+..|++.|.++
T Consensus 89 L~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv-~rg~l~iaIST~G~sP~la~~iR~~ie~~ 164 (223)
T 3dfz_A 89 LLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQF-SRGRLSLAISTDGASPLLTKRIKEDLSSN 164 (223)
T ss_dssp SSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEE-EETTEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred hCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEE-EeCCEEEEEECCCCCcHHHHHHHHHHHHH
Confidence 777777 8888887766666543222 34444 456665553 22 4334445555421 123346777777777
Q ss_pred hcCChHHHHHHHHHHHHHHHHHH
Q 012342 411 MEGEKGKQMRNKAMEWKGLAEEA 433 (465)
Q Consensus 411 l~~~~~~~~~~~a~~l~~~~~~~ 433 (465)
+.. +-..+-+.+.++.+++++.
T Consensus 165 lp~-~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 165 YDE-SYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp SCT-HHHHHHHHHHHHHHHHHHC
T ss_pred ccH-HHHHHHHHHHHHHHHHHHH
Confidence 743 2234777778888887764
No 67
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=68.11 E-value=10 Score=39.52 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=30.2
Q ss_pred eeccCh---------hhhhcCCCcceeeec---CCc-hhHHHHHhcCCcEEecCCC
Q 012342 329 ASWCPQ---------EEVLKHPSIGGFLTH---CGW-NSIVESLCSGVPMICWPFT 371 (465)
Q Consensus 329 ~~~~p~---------~~~l~~~~~~~~i~h---gG~-~s~~eal~~GvP~i~~P~~ 371 (465)
-.|++. ..++..+++ ||.- =|+ .+.+||+++|+|+|+--..
T Consensus 498 P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 498 PEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred ccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 367765 357888888 6643 244 4889999999999996553
No 68
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=67.85 E-value=9.4 Score=30.78 Aligned_cols=37 Identities=16% Similarity=0.113 Sum_probs=33.7
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+++|++.+.+..+|-....-++..|..+|++|...-.
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~ 39 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGV 39 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCC
Confidence 6799999999999999999999999999999996544
No 69
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=63.62 E-value=31 Score=29.14 Aligned_cols=102 Identities=12% Similarity=0.009 Sum_probs=54.6
Q ss_pred hhhhhhhcccCCCCceeEEeecc-ccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeec
Q 012342 253 ETECLQWLDCKEPKSVIYVNFGS-FIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASW 331 (465)
Q Consensus 253 ~~~l~~~l~~~~~~~~V~vs~GS-~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 331 (465)
..++-++|.+.. ...|+-|. .. ......++..+.|-+++=++.... . ..+... + ....+.+.
T Consensus 34 A~~lg~~La~~g---~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~~----~-~~~~~~---~-~~~i~~~~ 96 (176)
T 2iz6_A 34 ANELGKQIATHG---WILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGPD----T-SEISDA---V-DIPIVTGL 96 (176)
T ss_dssp HHHHHHHHHHTT---CEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC----------CCTT---C-SEEEECCC
T ss_pred HHHHHHHHHHCC---CEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCchh----h-hhhccC---C-ceeEEcCC
Confidence 345566665543 56666555 33 233444554455556655553210 0 011000 0 11334566
Q ss_pred cChh-hhhcCCCcceeeecCCchhHHHH---HhcCCcEEecCCC
Q 012342 332 CPQE-EVLKHPSIGGFLTHCGWNSIVES---LCSGVPMICWPFT 371 (465)
Q Consensus 332 ~p~~-~~l~~~~~~~~i~hgG~~s~~ea---l~~GvP~i~~P~~ 371 (465)
.+.. .++..-+.+.++--||.||..|+ +.+++|++.+|.+
T Consensus 97 ~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 97 GSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 6654 34443344467778999987655 6799999999984
No 70
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=61.91 E-value=11 Score=32.48 Aligned_cols=44 Identities=7% Similarity=0.015 Sum_probs=36.7
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhC-CCEEEEEeCCcchHHHHh
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHK-GFHITFVNTEFNHRRLLK 55 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~r-Gh~Vt~~t~~~~~~~~~~ 55 (465)
+||++.-.|+.|-.. ...|.+.|.++ |++|.++.++.-...+..
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~ 45 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIEL 45 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHH
Confidence 488888889988877 89999999999 999999998765555543
No 71
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=60.92 E-value=5.4 Score=32.65 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
+.||+++.+ |++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 668999865 4444 68899999999999999763
No 72
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=60.22 E-value=11 Score=31.38 Aligned_cols=38 Identities=13% Similarity=0.311 Sum_probs=34.7
Q ss_pred CCCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
.+++|++.+.+..+|-....-++..|..+|++|...-.
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~ 54 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGL 54 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCS
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC
Confidence 37899999999999999999999999999999997644
No 73
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=57.50 E-value=17 Score=31.47 Aligned_cols=44 Identities=14% Similarity=0.062 Sum_probs=37.5
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRL 53 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~ 53 (465)
+.+|++.+.++..|-....-++..|..+|++|...-..-..+.+
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 67999999999999999999999999999999987654433333
No 74
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=55.65 E-value=4.4 Score=37.37 Aligned_cols=34 Identities=24% Similarity=0.247 Sum_probs=27.0
Q ss_pred CEEEEEcCC----CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 11 VHAVCIPSP----FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 11 ~~il~~~~~----~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
|||+|..=+ +.||+.-++.||++|. +|+|++...
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~ 38 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPL 38 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCC
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecC
Confidence 356665543 7899999999999999 799997643
No 75
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=55.09 E-value=13 Score=33.92 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=24.9
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|||++. |+.|-+-- .|++.|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG~--~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIGT--ALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHHH--HHHHHHHHCCCEEEEEEC
Confidence 577655 67777664 578999999999999864
No 76
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=55.08 E-value=14 Score=30.15 Aligned_cols=38 Identities=16% Similarity=0.092 Sum_probs=26.9
Q ss_pred CCCCCCCCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 4 KPKACSKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 4 ~~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|+...+.++|+++..|..| ..+++.|.++|++|+++..
T Consensus 13 ~~~~~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDK 50 (155)
T ss_dssp ----CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred hhcccCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEEC
Confidence 3333346899999765555 5578999999999999875
No 77
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=53.78 E-value=15 Score=31.04 Aligned_cols=41 Identities=7% Similarity=-0.019 Sum_probs=34.4
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~ 51 (465)
+.||++.-.|+.|=.. ...+.+.|.++|++|.++.++.-.+
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~ 45 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRK 45 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGG
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHH
Confidence 3589998889887775 8899999999999999998876543
No 78
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=53.53 E-value=9.2 Score=31.63 Aligned_cols=35 Identities=17% Similarity=0.202 Sum_probs=28.9
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
.+++++. ++.| +.|++.+++.|.++|.+|+++ ...
T Consensus 24 ~~~llIa-GG~G-ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 24 GKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CeEEEEE-ccCc-HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4778777 4556 999999999999999999999 644
No 79
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=53.48 E-value=20 Score=32.31 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=34.3
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+.+|++.+.++..|-....-++..|..+|++|...-.
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~ 159 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGR 159 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC
Confidence 7899999999999999999999999999999987653
No 80
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=52.38 E-value=14 Score=34.54 Aligned_cols=96 Identities=11% Similarity=0.039 Sum_probs=59.5
Q ss_pred CCceeEEeecc-c---cCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhc----cCce-EeeccC--
Q 012342 265 PKSVIYVNFGS-F---IFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAK----EKGF-VASWCP-- 333 (465)
Q Consensus 265 ~~~~V~vs~GS-~---~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-v~~~~p-- 333 (465)
+++.|.+..|| . -.++.+.+.++++.|.+.+.++++. +.... . .....+.+..+ .++. +.+..+
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~e---~-~~~~~i~~~~~~~~~~~~~~l~g~~sl~ 253 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAKD---H-EAGNEILAALNTEQQAWCRNLAGETQLD 253 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGGG---H-HHHHHHHTTSCHHHHTTEEECTTTSCHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChhh---H-HHHHHHHHhhhhccccceEeccCcCCHH
Confidence 45688888888 3 2567889999999998778887764 43210 0 00111111111 1232 233322
Q ss_pred h-hhhhcCCCcceeeecCCchhHHHHHhcCCcEEec
Q 012342 334 Q-EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICW 368 (465)
Q Consensus 334 ~-~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~ 368 (465)
+ ..++.++++ +|+.- .|+++-|.+.|+|+|++
T Consensus 254 e~~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 254 QAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 2 469999999 99973 45566688899999986
No 81
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=52.13 E-value=18 Score=31.48 Aligned_cols=41 Identities=17% Similarity=0.050 Sum_probs=35.0
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHH
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRR 52 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~ 52 (465)
+.||++.-.|+.+-.. ...|.+.|.++| +|.++.++.-.+.
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~f 59 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHF 59 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGT
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHh
Confidence 5799999999998877 899999999999 9999988765433
No 82
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=49.16 E-value=31 Score=28.14 Aligned_cols=47 Identities=21% Similarity=0.244 Sum_probs=35.5
Q ss_pred CCEEEE-EcCC-CCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012342 10 KVHAVC-IPSP-FQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (465)
Q Consensus 10 ~~~il~-~~~~-~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (465)
.|++++ +.+| ..-.+--.+-++..|.++||+|++...+.-...++-+
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 455544 4556 4455666789999999999999999988877777665
No 83
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=48.99 E-value=27 Score=30.86 Aligned_cols=39 Identities=18% Similarity=0.128 Sum_probs=35.7
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
+++|++..-|+.|-..-++.+|..|+++|++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 789999999999999999999999999999998877644
No 84
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=48.89 E-value=34 Score=29.27 Aligned_cols=43 Identities=16% Similarity=0.117 Sum_probs=35.7
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012342 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLK 55 (465)
Q Consensus 12 ~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~ 55 (465)
||++.-.|+.|-. =...+.+.|.++|++|.++.++.-...+..
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 8999999999965 478999999999999999998765555544
No 85
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=48.54 E-value=12 Score=29.48 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
.+||+++.. |.+- ..+++.|.++||+|+++..
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEEC
Confidence 579999854 5553 3578999999999999865
No 86
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=47.63 E-value=17 Score=34.08 Aligned_cols=38 Identities=13% Similarity=0.053 Sum_probs=30.7
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhC-C-CEEEEEeCCc
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK-G-FHITFVNTEF 48 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~r-G-h~Vt~~t~~~ 48 (465)
+|||++++ ++.++......+++.|.++ | |+|+++++..
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~ 47 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQ 47 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCS
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCC
Confidence 68999997 5577888888999999987 5 8887776544
No 87
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=46.66 E-value=33 Score=29.92 Aligned_cols=39 Identities=15% Similarity=0.134 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
.+.+|++.+.++..|-....-++..|..+|++|...-..
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 378999999999999999999999999999999987543
No 88
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=46.01 E-value=26 Score=32.56 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=31.9
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (465)
+++|+++-.|+.|- .+|..|++.||+|+++.-.. .+.+.+.
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 2 SLNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp -CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 46999999998885 57889999999999998655 3555554
No 89
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=45.74 E-value=91 Score=31.71 Aligned_cols=65 Identities=11% Similarity=0.150 Sum_probs=39.9
Q ss_pred CcceeeecCC------chhHHHHHhcCCcEEecCC-------------CCChhhHHHhhcccceeEEEEecCCCCCCHHH
Q 012342 342 SIGGFLTHCG------WNSIVESLCSGVPMICWPF-------------TGDQPTNGRYVCNEWGVGMEINGDDEDVIRNE 402 (465)
Q Consensus 342 ~~~~~i~hgG------~~s~~eal~~GvP~i~~P~-------------~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 402 (465)
..+++++|.| .+.+.+|...++|+|++-- ..||....+.+ .++ ...+.. ..--.+.
T Consensus 68 k~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~Itg~~p~~~~g~~~~Q~~d~~~~~~~~-tk~--~~~v~~--~~~~~~~ 142 (590)
T 1v5e_A 68 NLGVTVGSGGPGASHLINGLYDAAMDNIPVVAILGSRPQRELNMDAFQELNQNPMYDHI-AVY--NRRVAY--AEQLPKL 142 (590)
T ss_dssp CCCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEEEECCGGGTTTTCTTCCCCHHHHHTT-CSE--EEECCS--GGGHHHH
T ss_pred CCEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEcCCCCcccCCCCcccccCHHHHHHhh-ccE--EEEeCC--HHHHHHH
Confidence 4555999998 6688999999999999732 12555555554 222 344432 2223455
Q ss_pred HHHHHHHHh
Q 012342 403 VEKLVREMM 411 (465)
Q Consensus 403 l~~ai~~~l 411 (465)
+.+|++..+
T Consensus 143 i~~A~~~A~ 151 (590)
T 1v5e_A 143 VDEAARMAI 151 (590)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 666666554
No 90
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=45.28 E-value=30 Score=31.98 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (465)
.++|+++-.|+.|- .+|..|++.||+|+++.-.. .+.+.+.
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 2 SLRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp --CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 36899999999995 46889999999999998654 3455443
No 91
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=45.04 E-value=21 Score=33.10 Aligned_cols=46 Identities=9% Similarity=0.008 Sum_probs=40.8
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHhh
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLLKA 56 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~~~ 56 (465)
+||+++-..+.||+.=...+.+.|.++ +.++++++.+.+.+.++..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 589999999999999999999999997 9999999998887766543
No 92
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=44.87 E-value=21 Score=33.18 Aligned_cols=41 Identities=5% Similarity=0.082 Sum_probs=30.3
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLK 55 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~ 55 (465)
+++|+++-.|+.| ..+|..|++.||+|+++..+...+.+.+
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~ 59 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEA 59 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHh
Confidence 6899999999988 4578899999999999932223344444
No 93
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=44.67 E-value=12 Score=29.83 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+.||+++.++..| ..+++.|.++||+|+++..
T Consensus 6 ~~~v~I~G~G~iG-----~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSEAAG-----VGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 4589988764433 5789999999999999865
No 94
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=44.36 E-value=18 Score=33.92 Aligned_cols=33 Identities=12% Similarity=0.008 Sum_probs=28.3
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
.+||+|+-.|+.|- .+|..|++.||+|+++...
T Consensus 3 ~mkI~IiGaG~~G~-----~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGG-----YLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHH-----HHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCEEEEEECh
Confidence 57999999988884 5789999999999999753
No 95
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=44.31 E-value=28 Score=30.07 Aligned_cols=39 Identities=15% Similarity=-0.079 Sum_probs=32.4
Q ss_pred CCEEEEEcCCCCccHH-HHHHHHHHHHhCCCEEEEEeCCcc
Q 012342 10 KVHAVCIPSPFQSHIK-AMLKLAKLLHHKGFHITFVNTEFN 49 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~-P~l~La~~L~~rGh~Vt~~t~~~~ 49 (465)
+.||++.-.|+ +..+ =.+.|.+.|.++|++|.++.++.-
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 56899888888 4455 789999999999999999988653
No 96
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=44.14 E-value=1.4e+02 Score=24.80 Aligned_cols=140 Identities=10% Similarity=0.002 Sum_probs=74.6
Q ss_pred ceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCccee
Q 012342 267 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGF 346 (465)
Q Consensus 267 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~ 346 (465)
|.|-|-+||.. +.+..++....|+..|..+-+.+-+... .|+.+.+- ..-+....+++|
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR------tp~~l~~~-------------~~~~~~~g~~Vi 64 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSAHR------TPDKMFDY-------------AETAKERGLKVI 64 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT------CHHHHHHH-------------HHHTTTTTCCEE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcCcC------CHHHHHHH-------------HHHHHhCCCcEE
Confidence 46777778876 5666778888888888877655544321 34333221 111111223448
Q ss_pred eecCCchhHHHHH---hcCCcEEecCCCCChh-hHHH-----hhcccceeEEEEecCCC---CCCHHHHHHHHHHHhcCC
Q 012342 347 LTHCGWNSIVESL---CSGVPMICWPFTGDQP-TNGR-----YVCNEWGVGMEINGDDE---DVIRNEVEKLVREMMEGE 414 (465)
Q Consensus 347 i~hgG~~s~~eal---~~GvP~i~~P~~~DQ~-~na~-----~~~~~~g~g~~~~~~~~---~~~~~~l~~ai~~~l~~~ 414 (465)
|.=+|...-+-.+ ..-+|+|.+|...... .... ..+.-.+++... . + ..++.-+...|.. +.|+
T Consensus 65 Ia~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~-I--~~ag~~nAa~lAa~Il~-~~d~ 140 (166)
T 3oow_A 65 IAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFA-I--GMAGAKNAALFAASILQ-HTDI 140 (166)
T ss_dssp EEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECC-S--THHHHHHHHHHHHHHHG-GGCH
T ss_pred EEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEe-c--CCccchHHHHHHHHHHc-CCCH
Confidence 8877754333222 3468999999844211 1111 122222333221 1 1 2233444443332 3566
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 012342 415 KGKQMRNKAMEWKGLAEEAA 434 (465)
Q Consensus 415 ~~~~~~~~a~~l~~~~~~~~ 434 (465)
. ++++.+.+++.+++.+
T Consensus 141 ~---l~~kl~~~r~~~~~~v 157 (166)
T 3oow_A 141 N---IAKALAEFRAEQTRFV 157 (166)
T ss_dssp H---HHHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHH
Confidence 6 8888888888877654
No 97
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=44.03 E-value=14 Score=35.64 Aligned_cols=36 Identities=8% Similarity=0.121 Sum_probs=25.4
Q ss_pred CCEEEEEc---CCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 10 KVHAVCIP---SPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~---~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
+|||++++ +| .+.-.-...+++.|+++| +|++++..
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 68999998 44 222122345788999999 99999654
No 98
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=43.14 E-value=24 Score=30.69 Aligned_cols=40 Identities=8% Similarity=-0.163 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCCccHHH-HHHHHHHHHhCCCEEEEEeCCcch
Q 012342 10 KVHAVCIPSPFQSHIKA-MLKLAKLLHHKGFHITFVNTEFNH 50 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P-~l~La~~L~~rGh~Vt~~t~~~~~ 50 (465)
+.||++.-.|+ +..+- ...|.+.|.++|++|.++.++.-.
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 46888888887 45665 789999999999999999886544
No 99
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=42.86 E-value=14 Score=34.16 Aligned_cols=38 Identities=13% Similarity=0.113 Sum_probs=29.6
Q ss_pred CCCCCCCCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 4 KPKACSKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 4 ~~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|......++|.|+-.|..|. .+|+.|+++||+|+++..
T Consensus 3 m~~~~~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCCCCCSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCcccCCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 44333367999998888775 689999999999998853
No 100
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=41.75 E-value=16 Score=34.80 Aligned_cols=29 Identities=24% Similarity=0.273 Sum_probs=25.7
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEE
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFV 44 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~ 44 (465)
|||+|+-.|--| +.+|..|+++|++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 699999887666 78899999999999998
No 101
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=41.71 E-value=24 Score=33.22 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=27.5
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCC-EEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGF-HITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh-~Vt~~t~ 46 (465)
|||++++ +..++...+..|+++|.++|+ ++.++.+
T Consensus 1 mkIl~v~-~~~~~~~~~~~l~~~L~~~g~~~~~v~~~ 36 (384)
T 1vgv_A 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVT 36 (384)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHSTTCEEEEEEC
T ss_pred CeEEEEe-cccHHHHHHHHHHHHHHhCCCCceEEEEc
Confidence 5888876 556778888999999999994 8876543
No 102
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=41.49 E-value=29 Score=30.74 Aligned_cols=26 Identities=15% Similarity=0.379 Sum_probs=21.1
Q ss_pred CccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 21 QSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 21 ~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
.|-+- .++|+.|+++|++|++++.+.
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 66654 467999999999999998753
No 103
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=41.49 E-value=28 Score=32.71 Aligned_cols=38 Identities=13% Similarity=-0.019 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhC-CCEEEEEeCCc
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK-GFHITFVNTEF 48 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~r-Gh~Vt~~t~~~ 48 (465)
.|||++++. ..++......|++.|.++ ||+|.++++..
T Consensus 5 mmkIl~v~~-~~~~~~~~~~l~~~L~~~~g~~v~~~~~~~ 43 (376)
T 1v4v_A 5 MKRVVLAFG-TRPEATKMAPVYLALRGIPGLKPLVLLTGQ 43 (376)
T ss_dssp CEEEEEEEC-SHHHHHHHHHHHHHHHTSTTEEEEEEECSS
T ss_pred ceEEEEEEe-ccHHHHHHHHHHHHHHhCCCCceEEEEcCC
Confidence 479999983 343445567789999998 89988766544
No 104
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=40.87 E-value=14 Score=37.02 Aligned_cols=36 Identities=11% Similarity=0.308 Sum_probs=29.5
Q ss_pred CCCCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 8 CSKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
..|+||||+-.+.-| +.+|+.|.+.|++||++....
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 348999999977555 578999999999999998654
No 105
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=40.38 E-value=1.6e+02 Score=24.66 Aligned_cols=86 Identities=19% Similarity=0.156 Sum_probs=52.4
Q ss_pred CceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcce
Q 012342 266 KSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGG 345 (465)
Q Consensus 266 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~ 345 (465)
+|.|-|-+||.. +.+..+++.+.|++.|..+-+.+-+... .|+.+.+-. .-.....+++
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAHR------tp~~l~~~~-------------~~a~~~g~~V 80 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR------TPDYMFEYA-------------ETARERGLKV 80 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT------SHHHHHHHH-------------HHTTTTTCCE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcccc------ChHHHHHHH-------------HHHHhcCceE
Confidence 467889999987 4567888888999999887666554432 344332210 0111122334
Q ss_pred eeecCCch----hHHHHHhcCCcEEecCCCCC
Q 012342 346 FLTHCGWN----SIVESLCSGVPMICWPFTGD 373 (465)
Q Consensus 346 ~i~hgG~~----s~~eal~~GvP~i~~P~~~D 373 (465)
+|.=+|.. ++.. -..-+|+|.+|....
T Consensus 81 iIa~AG~aahLpGvvA-a~T~~PVIGVPv~s~ 111 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVA-AKTNLPVIGVPVQSK 111 (181)
T ss_dssp EEEEECSSCCHHHHHH-TTCCSCEEEEECCCT
T ss_pred EEEeccccccchhhHH-hcCCCCEEEEecCCC
Confidence 77766643 3333 345689999999553
No 106
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=39.89 E-value=14 Score=29.51 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
+.||+++.+|-.|. .+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G~-----~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVGS-----LLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHHH-----HHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHHH-----HHHHHHHHCCCCEEEEECC
Confidence 57999998876664 7899999999999999764
No 107
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=38.97 E-value=20 Score=33.52 Aligned_cols=33 Identities=12% Similarity=0.190 Sum_probs=28.8
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
.+||.|+-.|..| ..+|..|++.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 6899999999888 47899999999999998653
No 108
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=38.55 E-value=20 Score=30.80 Aligned_cols=41 Identities=10% Similarity=-0.126 Sum_probs=34.5
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~ 51 (465)
+.||++.-.|+.|=.. ...|.+.|.++|++|.++.++.-.+
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~ 48 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAED 48 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHH
Confidence 4689999989988876 6899999999999999998865443
No 109
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=38.10 E-value=34 Score=31.78 Aligned_cols=32 Identities=16% Similarity=0.219 Sum_probs=28.0
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
.++|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 5799999999988 5689999999999998854
No 110
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=37.43 E-value=24 Score=31.26 Aligned_cols=32 Identities=13% Similarity=0.190 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+|+|.|+..|..|- .||+.|.++||+|+.+..
T Consensus 6 ~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 78999999999985 689999999999998765
No 111
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=37.13 E-value=43 Score=31.40 Aligned_cols=73 Identities=7% Similarity=0.102 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHH
Q 012342 279 MNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVES 358 (465)
Q Consensus 279 ~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~ea 358 (465)
.+.+....+.+++.....+.||.+.++.. -.++.++++...+-.+|.. ||-+.-...++-+
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 122 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYN-----------------SNGLLKYLDYDLIRENPKF--FCGYSDITALNNA 122 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHHhhcChhHHHhCCeE--EEEecchHHHHHH
Confidence 34567888999999999999999887642 1234555555555556655 7766666666666
Q ss_pred Hh--cCCcEEecCC
Q 012342 359 LC--SGVPMICWPF 370 (465)
Q Consensus 359 l~--~GvP~i~~P~ 370 (465)
++ .|+..+-=|+
T Consensus 123 l~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 123 IYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHCBCEEECCC
T ss_pred HHHhhCCcEEEccc
Confidence 65 4676666555
No 112
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=36.83 E-value=85 Score=29.52 Aligned_cols=27 Identities=22% Similarity=0.401 Sum_probs=21.7
Q ss_pred CCCcceeeecCCchhH---HHHHhcCCcEEec
Q 012342 340 HPSIGGFLTHCGWNSI---VESLCSGVPMICW 368 (465)
Q Consensus 340 ~~~~~~~i~hgG~~s~---~eal~~GvP~i~~ 368 (465)
.|++ +|++||.-+. ..|-..|+|+++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 6787 9999998765 5567889999963
No 113
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=35.44 E-value=24 Score=32.31 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+|+|+|+..|..|. .+|..|+++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEEC
Confidence 46999998887775 578999999999999865
No 114
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=35.41 E-value=3.2e+02 Score=26.56 Aligned_cols=148 Identities=9% Similarity=-0.030 Sum_probs=76.1
Q ss_pred CceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhc-cCceEeeccChhhhhcCCCcc
Q 012342 266 KSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAK-EKGFVASWCPQEEVLKHPSIG 344 (465)
Q Consensus 266 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~p~~~~l~~~~~~ 344 (465)
+.++.|+.|... ...++.|.+.|..+.++-.. +.+.+.+-.. .++.+..-.-+...|...++
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~---------~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~l- 75 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT---------FIPQFTVWANEGMLTLVEGPFDETLLDSCWL- 75 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS---------CCHHHHHHHTTTSCEEEESSCCGGGGTTCSE-
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC---------CCHHHHHHHhcCCEEEEECCCCccccCCccE-
Confidence 468888877644 33445666778877666542 2233332211 24444322223344556666
Q ss_pred eeeecCCchh-----HHHHHhcCCcEEe--cCCCCChhhHHHhhcccceeEEEEecCCCCCC-HHHHHHHHHHHhcCChH
Q 012342 345 GFLTHCGWNS-----IVESLCSGVPMIC--WPFTGDQPTNGRYVCNEWGVGMEINGDDEDVI-RNEVEKLVREMMEGEKG 416 (465)
Q Consensus 345 ~~i~hgG~~s-----~~eal~~GvP~i~--~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~-~~~l~~ai~~~l~~~~~ 416 (465)
+|.--|--. ..+|-..|+|+-+ -|-..+...-|-.--..+-+|+. ++.+..+ ...|++.|.+.+.+.-
T Consensus 76 -Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~~~~~~l~iaIs--T~Gksp~la~~ir~~ie~~l~~~~- 151 (457)
T 1pjq_A 76 -AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSIIDRSPLMVAVS--SGGTSPVLARLLREKLESLLPQHL- 151 (457)
T ss_dssp -EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEEEEETTEEEEEE--CTTSCHHHHHHHHHHHHHHSCTTH-
T ss_pred -EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeEEEeCCeEEEEE--CCCCChHHHHHHHHHHHHhcchhH-
Confidence 777777654 3345567888632 23333322111100012244555 3212222 5788888888885431
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 012342 417 KQMRNKAMEWKGLAEEAA 434 (465)
Q Consensus 417 ~~~~~~a~~l~~~~~~~~ 434 (465)
..+.+.+.++.+++++..
T Consensus 152 ~~~~~~~~~~R~~~~~~~ 169 (457)
T 1pjq_A 152 GQVARYAGQLRARVKKQF 169 (457)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 236666677777776543
No 115
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=34.71 E-value=22 Score=32.69 Aligned_cols=32 Identities=6% Similarity=0.158 Sum_probs=27.2
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhC-----C-CEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK-----G-FHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~r-----G-h~Vt~~t~ 46 (465)
+|+|.|+-.|..|. .+|..|+++ | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 57999999888884 568889888 9 99999965
No 116
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=34.61 E-value=26 Score=31.69 Aligned_cols=31 Identities=6% Similarity=-0.024 Sum_probs=25.9
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|+|.|+-.|..|. .+|..|+++||+|+++..
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCKQGHEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHHH-----HHHHHHHhCCCCEEEEEc
Confidence 4789998877774 678999999999999864
No 117
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=34.56 E-value=26 Score=32.87 Aligned_cols=32 Identities=16% Similarity=0.067 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+++|+++..|..|. .+|..|+++||+|+++..
T Consensus 4 ~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 57999998887774 468889999999999864
No 118
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=33.98 E-value=52 Score=30.63 Aligned_cols=18 Identities=11% Similarity=0.089 Sum_probs=14.3
Q ss_pred HHHHHHHcCCCeEEEcCC
Q 012342 100 TITAAQQLGLPIVLFFTI 117 (465)
Q Consensus 100 ~~~vA~~lgiP~v~~~~~ 117 (465)
...+|+.+|+|+++...+
T Consensus 215 iAl~Ak~~~vP~~V~a~~ 232 (315)
T 3ecs_A 215 MAVCAKAQNKPFYVVAES 232 (315)
T ss_dssp HHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHhCCCEEEEecc
Confidence 456789999999987554
No 119
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=33.78 E-value=37 Score=31.24 Aligned_cols=29 Identities=14% Similarity=0.219 Sum_probs=25.8
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEe
Q 012342 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVN 45 (465)
Q Consensus 12 ~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t 45 (465)
||.|+-.|.+|. .+|+.|+++||+|+++.
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 899999999995 68999999999999874
No 120
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=33.64 E-value=25 Score=32.40 Aligned_cols=32 Identities=9% Similarity=-0.070 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+++|.|+-.|..|. .+|+.|+++||+|+++..
T Consensus 7 ~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADL 38 (303)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEEC
Confidence 67999998888885 689999999999999854
No 121
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=33.17 E-value=20 Score=28.19 Aligned_cols=32 Identities=19% Similarity=0.117 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
..+|+++..+..| ..+++.|.+.|++|+++..
T Consensus 6 ~~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 6 NKQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHHTTCCCEEEES
T ss_pred CCcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 3478888755444 4578999999999998864
No 122
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=33.12 E-value=50 Score=30.38 Aligned_cols=38 Identities=5% Similarity=-0.050 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCCc-c---HHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 10 KVHAVCIPSPFQS-H---IKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~~~~~G-H---~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
++||+++.-+-.+ | +.--..+++.|.+.||+|..+-+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6788888754332 2 446788999999999999999753
No 123
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=33.03 E-value=55 Score=30.21 Aligned_cols=32 Identities=9% Similarity=0.121 Sum_probs=24.3
Q ss_pred hhcCCCcceeeecCCchhHHHHHhc----CCcEEecCC
Q 012342 337 VLKHPSIGGFLTHCGWNSIVESLCS----GVPMICWPF 370 (465)
Q Consensus 337 ~l~~~~~~~~i~hgG~~s~~eal~~----GvP~i~~P~ 370 (465)
....+++ +|.-||=||+.+++.. ++|+++++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 4456677 9999999999999754 899999875
No 124
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=32.95 E-value=53 Score=34.44 Aligned_cols=114 Identities=12% Similarity=0.040 Sum_probs=75.6
Q ss_pred eeccChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCChhhHH-Hhhc---ccceeEEEEecCCCCCCHHHHH
Q 012342 329 ASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNG-RYVC---NEWGVGMEINGDDEDVIRNEVE 404 (465)
Q Consensus 329 ~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~DQ~~na-~~~~---~~~g~g~~~~~~~~~~~~~~l~ 404 (465)
..+.+-.++|..+++ +||-- .+.+.|.+..++|+|....-.|+...- +-+- ++.--|.. .-+.++|.
T Consensus 604 ~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~------~~~~~eL~ 674 (729)
T 3l7i_A 604 SNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPI------YTEPYGLA 674 (729)
T ss_dssp TTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCE------ESSHHHHH
T ss_pred CCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCe------ECCHHHHH
Confidence 345566789999999 99984 446779999999999988766665431 1110 01111211 23678999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012342 405 KLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 454 (465)
Q Consensus 405 ~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 454 (465)
++|.+..... ..++++.+++.+++-. ..+|.++++.++.+++.....
T Consensus 675 ~~i~~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~~~~ 721 (729)
T 3l7i_A 675 KELKNLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDIKEQ 721 (729)
T ss_dssp HHHTTHHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcCcCc
Confidence 9988776432 2477777777777653 456778888888887766543
No 125
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=32.67 E-value=36 Score=29.53 Aligned_cols=43 Identities=21% Similarity=0.207 Sum_probs=33.3
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHh-CCCEEEEEeCCcchHHH
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHH-KGFHITFVNTEFNHRRL 53 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~-rGh~Vt~~t~~~~~~~~ 53 (465)
+.||++.-.|+.+=+. ...|.+.|.+ +|++|.++.++.-.+.+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 19 KFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp SEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred CCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 5789999989988665 5899999999 89999999887654333
No 126
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=32.46 E-value=47 Score=29.73 Aligned_cols=34 Identities=12% Similarity=0.220 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+.++++++-+ .|-+- .++|+.|+++|++|.+...
T Consensus 25 ~~k~vlITGa-s~gIG--~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 25 DTPVVLVTGG-SRGIG--AAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp CSCEEEETTT-TSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECC-CchHH--HHHHHHHHHCCCEEEEEcC
Confidence 4578888844 44443 6889999999999988744
No 127
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=32.28 E-value=40 Score=32.02 Aligned_cols=37 Identities=5% Similarity=0.087 Sum_probs=28.1
Q ss_pred CEEEEEc--CCC-CccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 11 VHAVCIP--SPF-QSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 11 ~~il~~~--~~~-~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
|||++++ +|. -|--.-...|++.|+++ |+|++++...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 5888875 343 44556678899999999 9999998644
No 128
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=32.25 E-value=35 Score=31.59 Aligned_cols=31 Identities=13% Similarity=0.078 Sum_probs=25.8
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|+|.|+-.|..|. .+|..|+++||+|+++..
T Consensus 1 m~I~iiG~G~mG~-----~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGS-----ALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEEc
Confidence 4789998887774 468899999999999865
No 129
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=32.15 E-value=39 Score=28.61 Aligned_cols=39 Identities=5% Similarity=-0.078 Sum_probs=32.3
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~ 50 (465)
.||++.-.|+.|=. =...+.+.|.++|++|.++.++.-.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHH
Confidence 37888888887776 5689999999999999999886644
No 130
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=32.12 E-value=32 Score=30.08 Aligned_cols=38 Identities=11% Similarity=-0.042 Sum_probs=33.1
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
|+|+|..-|+.|=-.-...||..|+++|++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 47888777899999999999999999999999986544
No 131
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=31.97 E-value=48 Score=30.54 Aligned_cols=41 Identities=12% Similarity=-0.040 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcc-hHHHHhh
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFN-HRRLLKA 56 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~-~~~~~~~ 56 (465)
+|+|+|+-.|+.|- .+|..|+ .||+|+++..... .+.+.+.
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~~ 43 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQSE 43 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHhC
Confidence 57999999999885 5688888 9999999976442 3345443
No 132
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=31.48 E-value=89 Score=29.97 Aligned_cols=36 Identities=17% Similarity=0.529 Sum_probs=27.4
Q ss_pred ChhhhhcCCCcceeeecCCchhHHHHHhc----CC-cEEecCC
Q 012342 333 PQEEVLKHPSIGGFLTHCGWNSIVESLCS----GV-PMICWPF 370 (465)
Q Consensus 333 p~~~~l~~~~~~~~i~hgG~~s~~eal~~----Gv-P~i~~P~ 370 (465)
+...+-..+++ +|+=||=||++.++.. ++ |+|+++.
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 34445566788 9999999999999743 67 7888764
No 133
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=31.04 E-value=44 Score=31.09 Aligned_cols=33 Identities=21% Similarity=0.135 Sum_probs=28.3
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
..||.|+-.+..| |-.+|+.|.++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 4689999999988 44699999999999999854
No 134
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=31.02 E-value=62 Score=30.21 Aligned_cols=73 Identities=4% Similarity=0.093 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHH
Q 012342 279 MNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVES 358 (465)
Q Consensus 279 ~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~ea 358 (465)
.+.+...++.+++.....+.||...++.. -.++.++++...+-.+|.. ||-..-..+++-+
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~a 122 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGFN-----------------SNQLLPYLDYDLISENPKI--LCGFSDITALATA 122 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCchh-----------------HHHHhhhcchhhhccCCeE--EEecccccHHHHH
Confidence 34567788999999999999999877642 1234455555555556655 6666665555555
Q ss_pred Hh--cCCcEEecCC
Q 012342 359 LC--SGVPMICWPF 370 (465)
Q Consensus 359 l~--~GvP~i~~P~ 370 (465)
++ .|+..+.=|+
T Consensus 123 l~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 123 IYTQTELITYSGAH 136 (327)
T ss_dssp HHHHHCBCEEECCC
T ss_pred HHHhcCeEEEeCcc
Confidence 53 3555544444
No 135
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=31.00 E-value=1.1e+02 Score=28.75 Aligned_cols=34 Identities=9% Similarity=0.225 Sum_probs=24.5
Q ss_pred eeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEc
Q 012342 268 VIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIR 303 (465)
Q Consensus 268 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~ 303 (465)
++++++|+.+ ....+..++++|.+.|.++.+++.
T Consensus 7 il~~~~~~~G--hv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 7 ILFANVQGHG--HVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEECCSSHH--HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCCCCc--ccccHHHHHHHHHhCCCEEEEEcC
Confidence 6777776543 223456688899999999888875
No 136
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=30.77 E-value=34 Score=30.47 Aligned_cols=31 Identities=16% Similarity=0.096 Sum_probs=25.2
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|+|.|+-.|..|. .+|+.|++.||+|+++..
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEECCT
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEeCC
Confidence 4788998877775 578999999999999643
No 137
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=30.71 E-value=35 Score=29.44 Aligned_cols=32 Identities=6% Similarity=0.109 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
.++|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 5789999877777 5678999999999998853
No 138
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=30.44 E-value=55 Score=28.30 Aligned_cols=32 Identities=31% Similarity=0.407 Sum_probs=23.4
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 12 ~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+.++++ |+.|-+- ..+++.|+++|++|+++.-
T Consensus 6 k~vlVt-GasggiG--~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 6 GAVLIT-GASRGIG--EATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CEEEES-STTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE-CCCcHHH--HHHHHHHHHCCCEEEEEEC
Confidence 455666 5555443 5789999999999988764
No 139
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=30.42 E-value=28 Score=32.81 Aligned_cols=96 Identities=13% Similarity=0.148 Sum_probs=60.1
Q ss_pred CCceeEEeecccc---CCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceE-eecc--Ch-hhh
Q 012342 265 PKSVIYVNFGSFI---FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFV-ASWC--PQ-EEV 337 (465)
Q Consensus 265 ~~~~V~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~--p~-~~~ 337 (465)
+++.|.+..||.. .++.+.+.++++.|.+.|.++++ +++... . .+.+.+.+..+.++.. .+-. .+ ..+
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~e---~-~~~~~i~~~~~~~~~~l~g~~sl~e~~al 258 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPMD---L-EMVQPVVEQMETKPIVATGKFQLGPLAAA 258 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTTT---H-HHHHHHHHTCSSCCEECTTCCCHHHHHHH
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcch---H-HHHHHHHHhcccccEEeeCCCCHHHHHHH
Confidence 3568889888853 56788999999998777888876 443311 0 0111222222333332 2322 23 468
Q ss_pred hcCCCcceeeecCCchhHHHHHhcCCcEEec
Q 012342 338 LKHPSIGGFLTHCGWNSIVESLCSGVPMICW 368 (465)
Q Consensus 338 l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~ 368 (465)
+.++++ +|+.- .|.++=|...|+|+|++
T Consensus 259 i~~a~~--~i~~D-sG~~HlAaa~g~P~v~l 286 (349)
T 3tov_A 259 MNRCNL--LITND-SGPMHVGISQGVPIVAL 286 (349)
T ss_dssp HHTCSE--EEEES-SHHHHHHHTTTCCEEEE
T ss_pred HHhCCE--EEECC-CCHHHHHHhcCCCEEEE
Confidence 999999 99983 23344478899999997
No 140
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=30.24 E-value=67 Score=30.14 Aligned_cols=73 Identities=11% Similarity=0.174 Sum_probs=52.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceeeecCCchhHHHH
Q 012342 279 MNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVES 358 (465)
Q Consensus 279 ~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i~hgG~~s~~ea 358 (465)
.+.+....+.+++.....+.||.++++.. -.++.++++...+-.+|.. ||-+.-...++-+
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 123 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGMN-----------------SNSLLPYIDYDAFQNNPKI--MIGYSDATALLLG 123 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHhhhcChhHHhhCCeE--EEEechHHHHHHH
Confidence 34567788999999999999999887642 1244556666666667766 8777777777777
Q ss_pred Hh--cCCcEEecCC
Q 012342 359 LC--SGVPMICWPF 370 (465)
Q Consensus 359 l~--~GvP~i~~P~ 370 (465)
++ .|+..+-=|+
T Consensus 124 l~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 124 IYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHCCCEEECCC
T ss_pred HHHhcCceEEECCh
Confidence 75 5777777776
No 141
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=30.23 E-value=1.5e+02 Score=25.75 Aligned_cols=44 Identities=14% Similarity=-0.005 Sum_probs=29.7
Q ss_pred eEeeccChh-hhhcCCCcceeeecCCchhHHHHHh---------cCCcEEecCC
Q 012342 327 FVASWCPQE-EVLKHPSIGGFLTHCGWNSIVESLC---------SGVPMICWPF 370 (465)
Q Consensus 327 ~v~~~~p~~-~~l~~~~~~~~i~hgG~~s~~eal~---------~GvP~i~~P~ 370 (465)
.+...++.. .++..-+.+.++--||.||+-|... +++|++.+-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 345555654 3444444456788999999988762 4899998875
No 142
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=29.94 E-value=34 Score=27.51 Aligned_cols=35 Identities=17% Similarity=0.202 Sum_probs=28.8
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
-+++++. ++.| +.|++.+++.|.++|.+|+++ ...
T Consensus 19 ~~~llIa-GG~G-iaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CeEEEEE-CcCc-HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4788877 4445 899999999999999999998 644
No 143
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=29.75 E-value=46 Score=30.64 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=27.4
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
.||.|+-.|.+|. .+|+.|.++||+|+++.-
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 3899999999995 689999999999999853
No 144
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=29.71 E-value=2.4e+02 Score=23.40 Aligned_cols=143 Identities=13% Similarity=0.075 Sum_probs=74.7
Q ss_pred CceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcce
Q 012342 266 KSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGG 345 (465)
Q Consensus 266 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~ 345 (465)
+|.|-|-+||.. +.+..++....|+..|.++-+.+-+... .|+.+.+-.. =.....+++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR------~p~~l~~~~~-------------~a~~~g~~V 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR------TPDYMFEYAE-------------TARERGLKV 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT------SHHHHHHHHH-------------HTTTTTCCE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEeccC------CHHHHHHHHH-------------HHHhCCCcE
Confidence 457888888876 5667778888888888887655554321 3433321100 000111233
Q ss_pred eeecCCchhHHHHH---hcCCcEEecCCCCC--hhhHHH--hhcc-cceeEEE-EecCC-CCCCHHHHHHHHHHHhcCCh
Q 012342 346 FLTHCGWNSIVESL---CSGVPMICWPFTGD--QPTNGR--YVCN-EWGVGME-INGDD-EDVIRNEVEKLVREMMEGEK 415 (465)
Q Consensus 346 ~i~hgG~~s~~eal---~~GvP~i~~P~~~D--Q~~na~--~~~~-~~g~g~~-~~~~~-~~~~~~~l~~ai~~~l~~~~ 415 (465)
||.=+|...-+-.+ ..-+|+|.+|.... +-..+- .+ + =-|+.+. +..++ +..++.-+...|. -+.|+.
T Consensus 70 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSiv-qmP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~~ 147 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAIGKAGSTNAGLLAAQIL-GSFHDD 147 (170)
T ss_dssp EEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHH-CCCTTCCCEECCSSHHHHHHHHHHHHHHH-HTTCHH
T ss_pred EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecCCcchHHHHHHHHHHH-ccCCHH
Confidence 77776654333222 34689999998542 111111 11 1 0244321 11100 1124444444443 345666
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 012342 416 GKQMRNKAMEWKGLAEEAA 434 (465)
Q Consensus 416 ~~~~~~~a~~l~~~~~~~~ 434 (465)
++++.+++++.+++.+
T Consensus 148 ---l~~kl~~~r~~~~~~v 163 (170)
T 1xmp_A 148 ---IHDALELRREAIEKDV 163 (170)
T ss_dssp ---HHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHH
Confidence 8888888888877644
No 145
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=29.69 E-value=30 Score=32.27 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
..+|.|+-.|..|. .+|..|+++||+|+++..
T Consensus 6 ~~kI~vIGaG~MG~-----~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 6 AGDVLIVGSGLVGR-----SWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CceEEEEeeCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 56899999888884 678999999999999865
No 146
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=29.51 E-value=67 Score=28.51 Aligned_cols=32 Identities=19% Similarity=0.164 Sum_probs=23.0
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 12 ~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
++++++ |+.|-+ =..+++.|+++|++|+++.-
T Consensus 8 k~vlVT-Gas~gI--G~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 8 KVALVT-GAAQGI--GRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp CEEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE-CCCCcH--HHHHHHHHHHCCCEEEEEEC
Confidence 566776 444433 25789999999999998754
No 147
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=29.25 E-value=2.2e+02 Score=28.54 Aligned_cols=66 Identities=11% Similarity=0.077 Sum_probs=39.3
Q ss_pred cceeeecCCch------hHHHHHhcCCcEEecCC-------------CCChhhHHHhhcccceeEEEEecCCCCCCHHHH
Q 012342 343 IGGFLTHCGWN------SIVESLCSGVPMICWPF-------------TGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEV 403 (465)
Q Consensus 343 ~~~~i~hgG~~------s~~eal~~GvP~i~~P~-------------~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l 403 (465)
.++++++.|-| .++||-+.++|+|++-- ..||....+-+ .++ ...+...+.+...+.+
T Consensus 72 pgv~~~TsGpG~~N~~~gia~A~~d~vPll~itG~~~~~~~g~~~~Q~~d~~~~~~~~-tk~--~~~v~~~~~~~~~~~i 148 (556)
T 3hww_A 72 PVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASH-PTH--SISLPRPTQDIPARWL 148 (556)
T ss_dssp CEEEEECSSHHHHTTHHHHHHHHHHCCCEEEEEEECCGGGSSSSCTTCCCCTTTTTTC-SSE--EEECCCCCTTSCHHHH
T ss_pred CEEEEECCCcHHHhhhHHHHHHHHhCCCeEEEeCCCCHHHhccCCCccccHHHHHhhh-eeE--EEecCCCcccccHHHH
Confidence 44599999965 78899999999999842 22555444444 222 3344321011224557
Q ss_pred HHHHHHHh
Q 012342 404 EKLVREMM 411 (465)
Q Consensus 404 ~~ai~~~l 411 (465)
.++|++.+
T Consensus 149 ~~~i~~A~ 156 (556)
T 3hww_A 149 VSTIDHAL 156 (556)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777665
No 148
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=29.02 E-value=55 Score=27.17 Aligned_cols=36 Identities=14% Similarity=0.328 Sum_probs=28.5
Q ss_pred CEEEEEcCCCCc-----cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 11 VHAVCIPSPFQS-----HIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 11 ~~il~~~~~~~G-----H~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
-+|+++| ++| --++.-.|++.|.++|.+|.|..+|-
T Consensus 24 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3677776 333 24689999999999999999999864
No 149
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=28.88 E-value=2.5e+02 Score=23.38 Aligned_cols=139 Identities=12% Similarity=0.076 Sum_probs=74.7
Q ss_pred ceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCccee
Q 012342 267 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGF 346 (465)
Q Consensus 267 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~ 346 (465)
+.|-|-+||.. +.+..++....|+..|.++=+.+-+... .|+.+.+-. -.. --...++ |
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaHR------~p~~~~~~~----------~~a-~~~g~~V--i 66 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAHR------TPEAMFSYA----------RGA-AARGLEV--I 66 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT------CHHHHHHHH----------HHH-HHHTCCE--E
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCCC------CHHHHHHHH----------HHH-HhCCCCE--E
Confidence 46777788876 5666778888888888887655554331 343332210 000 0022344 8
Q ss_pred eecCCch----hHHHHHhcCCcEEecCCCCChh-hHHHhh--cc-ccee--EEEEecCCCCCCHHHHHHHHHHHhcCChH
Q 012342 347 LTHCGWN----SIVESLCSGVPMICWPFTGDQP-TNGRYV--CN-EWGV--GMEINGDDEDVIRNEVEKLVREMMEGEKG 416 (465)
Q Consensus 347 i~hgG~~----s~~eal~~GvP~i~~P~~~DQ~-~na~~~--~~-~~g~--g~~~~~~~~~~~~~~l~~ai~~~l~~~~~ 416 (465)
|.=+|.. ++..+ ..-+|+|.+|...... .....+ .+ =-|+ +... .+ ...++..+...|.. +.|+.
T Consensus 67 Ia~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~-I~-~~~nAa~lAa~Il~-~~d~~- 141 (174)
T 3lp6_A 67 IAGAGGAAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVS-IG-GAGNAGLLAVRMLG-AANPQ- 141 (174)
T ss_dssp EEEEESSCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECC-TT-CHHHHHHHHHHHHH-TTCHH-
T ss_pred EEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEE-cC-cchHHHHHHHHHHh-CCCHH-
Confidence 8777644 33333 3568999999853221 111111 01 1243 3221 10 23344555544432 35665
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012342 417 KQMRNKAMEWKGLAEEA 433 (465)
Q Consensus 417 ~~~~~~a~~l~~~~~~~ 433 (465)
++++.+++++++++.
T Consensus 142 --l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 142 --LRARIVAFQDRLADV 156 (174)
T ss_dssp --HHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHH
Confidence 888888888887753
No 150
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=28.76 E-value=2.6e+02 Score=23.50 Aligned_cols=140 Identities=14% Similarity=0.108 Sum_probs=72.7
Q ss_pred ceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCccee
Q 012342 267 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGF 346 (465)
Q Consensus 267 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~ 346 (465)
|.|-|-+||.. +.+..+++...|+..|.++-+.+-+... .|+.+.+-.. =.....+++|
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR------~p~~l~~~~~-------------~a~~~g~~Vi 72 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAHR------TPDRMFEYAK-------------NAEERGIEVI 72 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT------CHHHHHHHHH-------------HTTTTTCCEE
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC------CHHHHHHHHH-------------HHHhCCCcEE
Confidence 47888888876 5667778888888888887655554321 3433322100 0001112237
Q ss_pred eecCCch----hHHHHHhcCCcEEecCCCCC--hhhHHH-hhcccc--eeEEE-EecCCCCCCHHHHHHHHHHHhcCChH
Q 012342 347 LTHCGWN----SIVESLCSGVPMICWPFTGD--QPTNGR-YVCNEW--GVGME-INGDDEDVIRNEVEKLVREMMEGEKG 416 (465)
Q Consensus 347 i~hgG~~----s~~eal~~GvP~i~~P~~~D--Q~~na~-~~~~~~--g~g~~-~~~~~~~~~~~~l~~ai~~~l~~~~~ 416 (465)
|.=+|.. ++..++ .-+|+|.+|.... .-..+- -+ -.. |+.+. +..+ +..++.-+...|. -+.|+.
T Consensus 73 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSi-vqmP~GvpVatV~Id-~~~nAa~lAaqIl-a~~d~~- 147 (183)
T 1o4v_A 73 IAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSI-VQMPGGVPVATVAIN-NAKNAGILAASIL-GIKYPE- 147 (183)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHH-HTCCTTCCCEECCTT-CHHHHHHHHHHHH-HTTCHH-
T ss_pred EEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHH-hcCCCCCeeEEEecC-CchHHHHHHHHHH-hcCCHH-
Confidence 7666643 333333 6688888888442 111221 11 122 43211 1110 3345555555554 345665
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 012342 417 KQMRNKAMEWKGLAEEAA 434 (465)
Q Consensus 417 ~~~~~~a~~l~~~~~~~~ 434 (465)
++++.+..++.+++.+
T Consensus 148 --l~~kL~~~r~~~~~~v 163 (183)
T 1o4v_A 148 --IARKVKEYKERMKREV 163 (183)
T ss_dssp --HHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHH
Confidence 7777777777666543
No 151
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=28.76 E-value=20 Score=31.15 Aligned_cols=31 Identities=13% Similarity=0.297 Sum_probs=24.3
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|||+++.++..| ..+|+.|.++||+|+++..
T Consensus 1 M~iiIiG~G~~G-----~~la~~L~~~g~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTA-----YYLARSMLSRKYGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECCCHHH-----HHHHHHHHhCCCeEEEEEC
Confidence 478888754444 4789999999999999975
No 152
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=28.75 E-value=49 Score=30.21 Aligned_cols=32 Identities=13% Similarity=0.127 Sum_probs=27.6
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
.++|.|+-.|..|. .+|+.|+++||+|+++..
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 46999999998885 678999999999999854
No 153
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=28.59 E-value=84 Score=29.11 Aligned_cols=75 Identities=13% Similarity=0.185 Sum_probs=54.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhc-CCCcceeeecCCchhHH
Q 012342 278 FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLK-HPSIGGFLTHCGWNSIV 356 (465)
Q Consensus 278 ~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~-~~~~~~~i~hgG~~s~~ 356 (465)
..+.+....+.+++.....+.||.++++.. -.++.++++...+-. +|.. ||-+.-...++
T Consensus 63 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyg-----------------a~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~ 123 (311)
T 1zl0_A 63 GTVEQRLEDLHNAFDMPDITAVWCLRGGYG-----------------CGQLLPGLDWGRLQAASPRP--LIGFSDISVLL 123 (311)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCSSC-----------------GGGGTTTCCHHHHHHSCCCC--EEECGGGHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEccCCcC-----------------HHHHhhccchhhhhccCCCE--EEEEchhHHHH
Confidence 345677888999999999999999887642 124455666666666 7777 88888888888
Q ss_pred HHHh-cCCcEEecCCC
Q 012342 357 ESLC-SGVPMICWPFT 371 (465)
Q Consensus 357 eal~-~GvP~i~~P~~ 371 (465)
-+++ .|++.+-=|+.
T Consensus 124 ~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 124 SAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHTTCCEEECCCG
T ss_pred HHHHHcCCcEEECHhh
Confidence 8875 38888777764
No 154
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=28.38 E-value=57 Score=27.18 Aligned_cols=35 Identities=17% Similarity=0.261 Sum_probs=28.0
Q ss_pred EEEEEcCCCCc-----cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 12 HAVCIPSPFQS-----HIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 12 ~il~~~~~~~G-----H~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
+|+++|- +| --++.-.|++.|.++|.+|.|..+|-
T Consensus 24 ~ViIvPG--YGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 24 SIIITPG--YGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp EEEEEEC--HHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEECC--hHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 6777763 22 24689999999999999999999864
No 155
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=28.36 E-value=42 Score=28.56 Aligned_cols=32 Identities=9% Similarity=0.117 Sum_probs=23.9
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|||+++ |+.|.+- ..|++.|+++||+|+.++-
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVR 32 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEc
Confidence 466554 5566554 4788999999999998874
No 156
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=28.32 E-value=2.1e+02 Score=23.82 Aligned_cols=141 Identities=13% Similarity=0.085 Sum_probs=72.6
Q ss_pred CceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcce
Q 012342 266 KSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGG 345 (465)
Q Consensus 266 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~ 345 (465)
.|.|-|-+||.. +.+..++....|+..|.++-+.+-+... .|+.+.+- ..-.....+++
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR------~p~~l~~~-------------~~~a~~~g~~V 70 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAHR------MPDEMFDY-------------AEKARERGLRA 70 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT------SHHHHHHH-------------HHHHTTTTCSE
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcccc------CHHHHHHH-------------HHHHHhcCCeE
Confidence 468888899977 5667788888888989887655544332 34433221 00111122333
Q ss_pred eeecCCch----hHHHHHhcCCcEEecCCCCCh---hh-HHHhhcc-cceeEEEEe-cCC-CCCCHHHHHHHHHHHhcCC
Q 012342 346 FLTHCGWN----SIVESLCSGVPMICWPFTGDQ---PT-NGRYVCN-EWGVGMEIN-GDD-EDVIRNEVEKLVREMMEGE 414 (465)
Q Consensus 346 ~i~hgG~~----s~~eal~~GvP~i~~P~~~DQ---~~-na~~~~~-~~g~g~~~~-~~~-~~~~~~~l~~ai~~~l~~~ 414 (465)
+|.=.|.- ++..+ ..-+|+|.+|..... .+ -...+ + =-|+.+-.- .+. +..++.-+...|- .+.|+
T Consensus 71 iIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSiv-qMP~Gvpvatv~i~~~~a~NAallA~~IL-a~~d~ 147 (173)
T 4grd_A 71 IIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIV-QMPKGVPVATFAIGEAGAANAALFAVSIL-SGNSV 147 (173)
T ss_dssp EEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECCSSHHHHHHHHHHHHHHH-TTSCH
T ss_pred EEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHH-hCCCCCCceEEecCCcchHHHHHHHHHHH-cCCCH
Confidence 77666533 33333 557999999974432 11 11111 2 124322210 000 0112223333222 13466
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 012342 415 KGKQMRNKAMEWKGLAEEA 433 (465)
Q Consensus 415 ~~~~~~~~a~~l~~~~~~~ 433 (465)
+ +++|.++++++.++.
T Consensus 148 ~---l~~kl~~~r~~~~~~ 163 (173)
T 4grd_A 148 D---YANRLAAFRVRQNEA 163 (173)
T ss_dssp H---HHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHH
Confidence 5 888888887777653
No 157
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=28.27 E-value=1e+02 Score=23.30 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=28.3
Q ss_pred eeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCC
Q 012342 268 VIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPD 305 (465)
Q Consensus 268 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 305 (465)
.|||-|.| +++.+.++...+...|.++++.....
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 57776655 78899999999999999999888754
No 158
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=28.27 E-value=41 Score=31.01 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
.++|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 21 m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 21 MMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp SCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 5799999888777 5689999999999999864
No 159
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=28.22 E-value=3.2e+02 Score=27.33 Aligned_cols=65 Identities=17% Similarity=0.167 Sum_probs=39.1
Q ss_pred cceeeecCCc------hhHHHHHhcCCcEEecCC-------------CCChhhHHHhhcccceeEEEEecCCCCCCHHHH
Q 012342 343 IGGFLTHCGW------NSIVESLCSGVPMICWPF-------------TGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEV 403 (465)
Q Consensus 343 ~~~~i~hgG~------~s~~eal~~GvP~i~~P~-------------~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l 403 (465)
.+++++|.|- +.+.||-+.++|+|++-- ..||....+-+ . +....+.. ..--.+.|
T Consensus 74 p~v~~~TsGpG~~N~~~~l~~A~~~~vPll~itg~~~~~~~~~~~~Q~~d~~~~~~~~-t--k~~~~v~~--~~~~~~~i 148 (566)
T 1ozh_A 74 AGVALVTSGPGCSNLITGMATANSEGDPVVALGGAVKRADKAKQVHQSMDTVAMFSPV-T--KYAIEVTA--PDALAEVV 148 (566)
T ss_dssp CEEEEECSTHHHHTTHHHHHHHHHHTCCEEEEEEECCTTTC------CCCHHHHHGGG-C--SEEEECCS--GGGHHHHH
T ss_pred CEEEEEccChHHHHHHHHHHHHHhcCCCEEEEeCCCccccCCCCcccccCHHHHHHHH-h--heEEEcCC--HHHHHHHH
Confidence 3449999996 688899999999999742 22444444444 2 22334432 22234556
Q ss_pred HHHHHHHhc
Q 012342 404 EKLVREMME 412 (465)
Q Consensus 404 ~~ai~~~l~ 412 (465)
.+|++..+.
T Consensus 149 ~~A~~~A~~ 157 (566)
T 1ozh_A 149 SNAFRAAEQ 157 (566)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 666666553
No 160
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=27.83 E-value=35 Score=29.22 Aligned_cols=71 Identities=8% Similarity=-0.004 Sum_probs=40.4
Q ss_pred HHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCC--CCCCCCCCCcccCCCCCCccCchHHHHHHHc
Q 012342 30 LAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDG--LPASSDESPTAQDAYSLDGFLPFTITAAQQL 107 (465)
Q Consensus 30 La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~vA~~l 107 (465)
+|++|.+.|..||+++-..-...+.+. . .++..+-+.-. ...+ +... -.=......+|+.+
T Consensus 22 ta~eL~~~gI~vtlI~Dsa~~~~m~~~-~-------~~Vd~VivGAd~v~~nG--~v~n-------kiGT~~~Al~Ak~~ 84 (191)
T 1w2w_B 22 TAYELVYDKIPSTLITDSSIAYRIRTS-P-------IPIKAAFVGADRIVRNG--DTAN-------KIGTLQLAVICKQF 84 (191)
T ss_dssp HHHHHHHHTCCBEEBCGGGHHHHHHHC-S-------SCEEEEEECCSEECTTS--CEEE-------ETTHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEechHHHHHHHhC-C-------CCCCEEEECccEEecCC--CEEe-------cccHHHHHHHHHHc
Confidence 599999999999999864444334431 0 01555444311 1111 0100 01113455688999
Q ss_pred CCCeEEEcCC
Q 012342 108 GLPIVLFFTI 117 (465)
Q Consensus 108 giP~v~~~~~ 117 (465)
|+|+++...+
T Consensus 85 ~vPf~V~a~~ 94 (191)
T 1w2w_B 85 GIKFFVVAPK 94 (191)
T ss_dssp TCEEEEECCG
T ss_pred CCCEEEeccc
Confidence 9999998665
No 161
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=27.83 E-value=1.4e+02 Score=29.83 Aligned_cols=64 Identities=14% Similarity=0.145 Sum_probs=38.2
Q ss_pred cceeeecCCc------hhHHHHHhcCCcEEec-------------CCC-CChhhHHHhhcccceeEEEEecCCCCCCHHH
Q 012342 343 IGGFLTHCGW------NSIVESLCSGVPMICW-------------PFT-GDQPTNGRYVCNEWGVGMEINGDDEDVIRNE 402 (465)
Q Consensus 343 ~~~~i~hgG~------~s~~eal~~GvP~i~~-------------P~~-~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 402 (465)
.+++++|.|- +.+.||-+.++|+|++ .+. .||....+-+ .++ ...+.. ..--.+.
T Consensus 64 ~~v~~~tsGpG~~N~~~~l~~A~~~~~Pll~itg~~~~~~~~~~~~q~~~d~~~~~~~~-~k~--~~~v~~--~~~~~~~ 138 (528)
T 1q6z_A 64 PAFINLHSAAGTGNAMGALSNAWNSHSPLIVTAGQQTRAMIGVEALLTNVDAANLPRPL-VKW--SYEPAS--AAEVPHA 138 (528)
T ss_dssp CEEEEEEHHHHHHHTHHHHHHHHHTTCCEEEEEEECCHHHHTTTCTTCCTTGGGSSTTS-CSC--EECCSS--GGGHHHH
T ss_pred CEEEEEcCChHHHHHHHHHHHHhhcCCCEEEEeCCCcccccCCCcccccccHHHHHHHh-hHh--hhcCCC--HHHHHHH
Confidence 3448888874 4678999999999999 233 3665555554 222 223322 1123456
Q ss_pred HHHHHHHHh
Q 012342 403 VEKLVREMM 411 (465)
Q Consensus 403 l~~ai~~~l 411 (465)
+.++++..+
T Consensus 139 i~~A~~~a~ 147 (528)
T 1q6z_A 139 MSRAIHMAS 147 (528)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 677776665
No 162
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=27.43 E-value=42 Score=30.40 Aligned_cols=31 Identities=13% Similarity=0.100 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEe
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVN 45 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t 45 (465)
+++|.|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 47999999888886 46888999999998775
No 163
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=27.27 E-value=2.1e+02 Score=23.41 Aligned_cols=126 Identities=15% Similarity=0.146 Sum_probs=64.6
Q ss_pred CceeEEeeccccCCCH-H-HHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceE-eeccChhhhhcCCC
Q 012342 266 KSVIYVNFGSFIFMNK-Q-QLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFV-ASWCPQEEVLKHPS 342 (465)
Q Consensus 266 ~~~V~vs~GS~~~~~~-~-~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~p~~~~l~~~~ 342 (465)
...||++ |++.+... . .+.++.+.|++.| .++ +.....+.. ..... .+...- .-+.-....+..++
T Consensus 11 ~~kVYLA-Gp~~~~~~~~~~~~~i~~~l~~~G-~V~--~~~~~~p~~-~~~g~------~~~~~~~~i~~~d~~~i~~aD 79 (165)
T 2khz_A 11 PCSVYFC-GSIRGGREDQALYARIVSRLRRYG-KVL--TEHVADAEL-EPLGE------EAAGGDQFIHEQDLNWLQQAD 79 (165)
T ss_dssp CCEEEEE-CCCSSCSHHHHHHHHHHHHHHHHS-EES--GGGTTTTSS-SCCST------TSTTCHHHHHHHHHHHHHHCS
T ss_pred CeEEEEE-CCCCCcHHHHHHHHHHHHHHHhcC-Ccc--cccccCchh-hcccc------ccccCHHHHHHHHHHHHHhCC
Confidence 3479998 66654443 2 4677888898888 554 111100000 00000 000000 00111234677777
Q ss_pred cceee---ecCCchhHHHH---HhcCCcEEecCCCC-ChhhHHHhhcccceeE----EEEecCCCCCCHHHHHHHHHHHh
Q 012342 343 IGGFL---THCGWNSIVES---LCSGVPMICWPFTG-DQPTNGRYVCNEWGVG----MEINGDDEDVIRNEVEKLVREMM 411 (465)
Q Consensus 343 ~~~~i---~hgG~~s~~ea---l~~GvP~i~~P~~~-DQ~~na~~~~~~~g~g----~~~~~~~~~~~~~~l~~ai~~~l 411 (465)
+ +| +.-.+||..|. ...|+|++++=--. +...|+. + + |.. +.+. . .+.+++.+.|.+.+
T Consensus 80 ~--vva~~~~~d~Gt~~EiGyA~algKPVi~l~~~~~~~~~n~M-~-~--g~~~~~~~~~~---~-y~~~el~~~l~~~~ 149 (165)
T 2khz_A 80 V--VVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAM-I-R--GAADGSRFQVW---D-YAEGEVETMLDRYF 149 (165)
T ss_dssp E--EEEECSSCCHHHHHHHHHHHHTCSSEEEEECTTTTCCCCHH-H-H--HTCCSSSEEEE---E-CCTTTHHHHHHHHH
T ss_pred E--EEEECCCCCCCHHHHHHHHHHCCCEEEEEEcCCCCCcchhh-h-c--ccCccceeEEE---e-cCHHHHHHHHHHHH
Confidence 7 43 35579999996 67899999972211 1334444 3 2 332 1222 1 26677777777776
Q ss_pred c
Q 012342 412 E 412 (465)
Q Consensus 412 ~ 412 (465)
.
T Consensus 150 ~ 150 (165)
T 2khz_A 150 E 150 (165)
T ss_dssp H
T ss_pred H
Confidence 4
No 164
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=26.91 E-value=2.7e+02 Score=27.84 Aligned_cols=65 Identities=18% Similarity=0.217 Sum_probs=40.6
Q ss_pred ceeeecCCch------hHHHHHhcCCcEEecCC---------------CCChhhHHHhhcccceeEEEEecCCCCCCHHH
Q 012342 344 GGFLTHCGWN------SIVESLCSGVPMICWPF---------------TGDQPTNGRYVCNEWGVGMEINGDDEDVIRNE 402 (465)
Q Consensus 344 ~~~i~hgG~~------s~~eal~~GvP~i~~P~---------------~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 402 (465)
+++++|.|-| .+.||-+.++|+|++-- ..||....+-+ . +....+.. ..--.+.
T Consensus 72 gv~~~TsGpG~~N~~~gi~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~-t--k~~~~v~~--~~~~~~~ 146 (564)
T 2q28_A 72 GICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPY-A--KAAFRVNQ--PQDLGIA 146 (564)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHTCCEEEEEEECCHHHHHTTSCCTTCCCHHHHHGGG-S--SEEEECCS--GGGHHHH
T ss_pred EEEEEccCchHHHHHHHHHHHHhcCCCEEEEeCCCCccccCCCCCccccccHHHHHHHh-h--heeeecCC--HHHHHHH
Confidence 3499999964 67799999999999843 12454444444 2 22344532 2224567
Q ss_pred HHHHHHHHhcC
Q 012342 403 VEKLVREMMEG 413 (465)
Q Consensus 403 l~~ai~~~l~~ 413 (465)
|.+|++..+..
T Consensus 147 i~~A~~~A~~~ 157 (564)
T 2q28_A 147 LARAIRVSVSG 157 (564)
T ss_dssp HHHHHHHHHSS
T ss_pred HHHHHHHHhcC
Confidence 77777777653
No 165
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=26.82 E-value=62 Score=27.53 Aligned_cols=36 Identities=14% Similarity=0.380 Sum_probs=28.3
Q ss_pred CEEEEEcCCCCc-----cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 11 VHAVCIPSPFQS-----HIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 11 ~~il~~~~~~~G-----H~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
-+|+++|- +| --++.-.|++.|.++|.+|.|..+|-
T Consensus 47 ~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPG--YGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEcC--chHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 36777763 32 24688999999999999999999864
No 166
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=26.76 E-value=1.3e+02 Score=29.19 Aligned_cols=32 Identities=16% Similarity=0.122 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
..||+|+-.+..| +.+|+.|+++||+|+..=.
T Consensus 9 ~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 9 NKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 5699999998776 4569999999999999854
No 167
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=26.56 E-value=1.2e+02 Score=23.50 Aligned_cols=37 Identities=16% Similarity=-0.006 Sum_probs=24.5
Q ss_pred CceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEE
Q 012342 266 KSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWII 302 (465)
Q Consensus 266 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~ 302 (465)
..+|+|+.||......+.+..+...+++...++.+.+
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~ 42 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAY 42 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 4599999999753334567777777766444554443
No 168
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=26.49 E-value=79 Score=26.48 Aligned_cols=36 Identities=19% Similarity=0.383 Sum_probs=29.8
Q ss_pred EEEEEc--CCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 12 HAVCIP--SPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 12 ~il~~~--~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
+++.+. -|+.|=-.-...||..|+++|++|.++-..
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 455444 378999999999999999999999998654
No 169
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=26.44 E-value=43 Score=30.67 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
..+|.|+-.|..|+ .+|..|+++||+|+++...
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 35899999988887 5788999999999988653
No 170
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=26.43 E-value=84 Score=30.08 Aligned_cols=20 Identities=10% Similarity=0.052 Sum_probs=15.6
Q ss_pred hHHHHHHHcCCCeEEEcCCc
Q 012342 99 FTITAAQQLGLPIVLFFTIS 118 (465)
Q Consensus 99 ~~~~vA~~lgiP~v~~~~~~ 118 (465)
....+|+.+|||+++..++.
T Consensus 281 ~lAl~Ak~~~vPfyV~ap~~ 300 (383)
T 2a0u_A 281 NLAVSAKFHGVKLYVAAPTT 300 (383)
T ss_dssp HHHHHHHHTTCCEEEECCGG
T ss_pred HHHHHHHHcCCCEEEeCCcc
Confidence 35567899999999986653
No 171
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=26.42 E-value=80 Score=30.14 Aligned_cols=20 Identities=15% Similarity=0.163 Sum_probs=15.6
Q ss_pred hHHHHHHHcCCCeEEEcCCc
Q 012342 99 FTITAAQQLGLPIVLFFTIS 118 (465)
Q Consensus 99 ~~~~vA~~lgiP~v~~~~~~ 118 (465)
....+|+.+|||+++..++.
T Consensus 277 ~lAl~Ak~~~vPfyV~ap~~ 296 (374)
T 2yvk_A 277 GLAILANAFDIPFFVAAPLS 296 (374)
T ss_dssp HHHHHHHHTTCCEEEECCGG
T ss_pred HHHHHHHHcCCCEEEecccc
Confidence 45568899999999986653
No 172
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=26.39 E-value=37 Score=31.05 Aligned_cols=32 Identities=9% Similarity=-0.070 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+++|.|+-.|..|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 56899999998885 689999999999999854
No 173
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=26.39 E-value=1e+02 Score=27.30 Aligned_cols=39 Identities=15% Similarity=0.324 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCCc-----------cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 10 KVHAVCIPSPFQS-----------HIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 10 ~~~il~~~~~~~G-----------H~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
+.||+|+-....+ ...=++.-...|.+.|++|+++++..
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4578887765422 22456677788899999999999743
No 174
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=26.32 E-value=58 Score=30.63 Aligned_cols=19 Identities=5% Similarity=-0.034 Sum_probs=15.1
Q ss_pred hHHHHHHHcCCCeEEEcCC
Q 012342 99 FTITAAQQLGLPIVLFFTI 117 (465)
Q Consensus 99 ~~~~vA~~lgiP~v~~~~~ 117 (465)
....+|+.+|||+++..++
T Consensus 234 ~lAl~Ak~~~vPfyV~a~~ 252 (338)
T 3a11_A 234 LIALTAKEHRVWTMIAAET 252 (338)
T ss_dssp HHHHHHHHTTCEEEEECCG
T ss_pred HHHHHHHHcCCCEEEeccc
Confidence 3556789999999998665
No 175
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=26.21 E-value=33 Score=30.85 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+++|+++. + |-+- ..|++.|.++||+|+.++-
T Consensus 3 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r 34 (286)
T 3gpi_A 3 LSKILIAG--C-GDLG--LELARRLTAQGHEVTGLRR 34 (286)
T ss_dssp CCCEEEEC--C-SHHH--HHHHHHHHHTTCCEEEEEC
T ss_pred CCcEEEEC--C-CHHH--HHHHHHHHHCCCEEEEEeC
Confidence 45787773 4 7544 4678999999999999864
No 176
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=26.20 E-value=87 Score=31.85 Aligned_cols=43 Identities=9% Similarity=0.006 Sum_probs=37.0
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHH
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRR 52 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~ 52 (465)
+.+|++.+.++..|-....-++..|..+|++|...-..-..+.
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~ 140 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEK 140 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 7899999999999999999999999999999998755443333
No 177
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=26.11 E-value=64 Score=27.50 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=28.3
Q ss_pred CEEEEEcCCCCc-----cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 11 VHAVCIPSPFQS-----HIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 11 ~~il~~~~~~~G-----H~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
-+|+++|- +| --++.-.|++.|.++|.+|.|..+|-
T Consensus 46 ~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITPG--YGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECC--chHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 36777763 32 24788999999999999999999864
No 178
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=26.04 E-value=2.5e+02 Score=28.35 Aligned_cols=64 Identities=13% Similarity=0.102 Sum_probs=38.8
Q ss_pred cceeeecCCch------hHHHHHhcCCcEEecCC-------------CCChhhHHHhhcccceeEEEEecCCCCCCHHHH
Q 012342 343 IGGFLTHCGWN------SIVESLCSGVPMICWPF-------------TGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEV 403 (465)
Q Consensus 343 ~~~~i~hgG~~------s~~eal~~GvP~i~~P~-------------~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l 403 (465)
.+++++|.|-| .+.||-..++|+|++-- ..||....+-+ .++ ...+.. ..--.+.|
T Consensus 76 p~v~~~TsGpG~~N~~~gv~~A~~~~vPll~itg~~~~~~~g~~~~Q~~d~~~~~~~~-~k~--~~~v~~--~~~i~~~l 150 (590)
T 1ybh_A 76 PGICIATSGPGATNLVSGLADALLDSVPLVAITGQVPRRMIGTDAFQETPIVEVTRSI-TKH--NYLVMD--VEDIPRII 150 (590)
T ss_dssp CEEEEECTTHHHHTTHHHHHHHHHHTCCEEEEEEECCGGGTTTTCTTCCCHHHHHGGG-SSE--EEECCC--GGGHHHHH
T ss_pred CEEEEeccCchHHHHHHHHHHHHhhCCCEEEEeCcCCccccCCCcccccCHHHHHHHH-hCe--EEecCC--HHHHHHHH
Confidence 34499999954 77899999999999843 23666666655 322 334432 22223455
Q ss_pred HHHHHHHh
Q 012342 404 EKLVREMM 411 (465)
Q Consensus 404 ~~ai~~~l 411 (465)
.+|++..+
T Consensus 151 ~~A~~~a~ 158 (590)
T 1ybh_A 151 EEAFFLAT 158 (590)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55555444
No 179
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=26.03 E-value=51 Score=29.11 Aligned_cols=32 Identities=13% Similarity=0.146 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
.++|.|+-.|..|- .||+.|+++||+|+++..
T Consensus 19 ~~kIgiIG~G~mG~-----alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 19 GMKIAVLGTGTVGR-----TMAGALADLGHEVTIGTR 50 (245)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 68999998887774 579999999999999864
No 180
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=25.88 E-value=48 Score=28.28 Aligned_cols=31 Identities=16% Similarity=0.094 Sum_probs=23.8
Q ss_pred CEEEEEc-CCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIP-SPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~-~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|+|+++- .|..|. .+++.|.++||+|+++..
T Consensus 1 m~i~iiGa~G~~G~-----~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLGK-----GLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHHH-----HHHHHHHTTTCEEEEEES
T ss_pred CeEEEEcCCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 4788886 555553 578899999999999864
No 181
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=25.74 E-value=50 Score=28.22 Aligned_cols=32 Identities=6% Similarity=0.073 Sum_probs=23.8
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|+|+++ |+.|.+- ..|++.|+++||+|+.++-
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVR 32 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEe
Confidence 465554 5666654 5788999999999999874
No 182
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=25.53 E-value=49 Score=28.93 Aligned_cols=42 Identities=10% Similarity=0.005 Sum_probs=28.3
Q ss_pred EeeccChh-hh-hcCCCcceeeecCCchhHHHHH---------hcCCcEEecCC
Q 012342 328 VASWCPQE-EV-LKHPSIGGFLTHCGWNSIVESL---------CSGVPMICWPF 370 (465)
Q Consensus 328 v~~~~p~~-~~-l~~~~~~~~i~hgG~~s~~eal---------~~GvP~i~~P~ 370 (465)
+...++.. .+ ...++ +.++--||.||+-|.. .+++|++.+-.
T Consensus 91 ~~~~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 91 VVADMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EESSHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccCCHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 34444443 23 33444 4677889999988776 47999999874
No 183
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=25.49 E-value=38 Score=32.12 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=28.8
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
+++|.|+-.|..|- .+|..|++.||+|+++...
T Consensus 29 ~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 67999999998885 5899999999999999763
No 184
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=25.33 E-value=56 Score=29.59 Aligned_cols=32 Identities=13% Similarity=0.166 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
..+|.|+-.|..|. .+|..|+++||+|+++..
T Consensus 4 ~~kV~VIGaG~mG~-----~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 4 ITNVTVLGTGVLGS-----QIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEeC
Confidence 45899998887774 689999999999999854
No 185
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=25.28 E-value=31 Score=33.01 Aligned_cols=42 Identities=19% Similarity=0.128 Sum_probs=28.3
Q ss_pred CCCCCCCCCCCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 1 MESKPKACSKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 1 m~~~~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
|++.++ ++++||+++-.|.-| +..|+.|...|++||++....
T Consensus 1 ~~~~~~-~~~~~~vIvGgG~AG-----l~aA~~L~~~~~~itlie~~~ 42 (385)
T 3klj_A 1 MHHHHH-HKSTKILILGAGPAG-----FSAAKAALGKCDDITMINSEK 42 (385)
T ss_dssp --------CBCSEEEECCSHHH-----HHHHHHHTTTCSCEEEECSSS
T ss_pred CCCccc-cCCCCEEEEcCcHHH-----HHHHHHHhCCCCEEEEEECCC
Confidence 554443 458999999977655 677888877899999997643
No 186
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=25.19 E-value=35 Score=29.06 Aligned_cols=61 Identities=20% Similarity=0.206 Sum_probs=40.3
Q ss_pred ccceeEEEEecCCCCCCHHHHHHHHHHHhcCCh----HHHHHHHHHHHHHHHHH----HhCCCCchHHHHHHHHHHH
Q 012342 383 NEWGVGMEINGDDEDVIRNEVEKLVREMMEGEK----GKQMRNKAMEWKGLAEE----AAAPHGSSSLNLDKLVNEI 451 (465)
Q Consensus 383 ~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~~----~~~~~~~a~~l~~~~~~----~~~~~g~~~~~~~~~~~~~ 451 (465)
+.-|||+.+ |+|+|.++|.++++... .++|+ +...+-..+|+ -|+++......+++-+-++
T Consensus 109 ~~cGVGV~V-------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~l~l 177 (187)
T 3tl4_X 109 ENSGVGIEI-------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEVLKL 177 (187)
T ss_dssp HTTTTTCCC-------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHHHHH
T ss_pred HHCCCCeEe-------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHH
Confidence 556888766 89999999999996432 22456 66666666664 1356666666666554443
No 187
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=25.13 E-value=1.5e+02 Score=26.19 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCCc-----------cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 10 KVHAVCIPSPFQS-----------HIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 10 ~~~il~~~~~~~G-----------H~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
..||+++-....+ ...=++.--..|.+.|++|+++++..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3578888766422 15567777789999999999999743
No 188
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=25.04 E-value=96 Score=24.46 Aligned_cols=38 Identities=8% Similarity=-0.024 Sum_probs=28.1
Q ss_pred CEEEEE-cCC--CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 11 VHAVCI-PSP--FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 11 ~~il~~-~~~--~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
.|++|+ ..+ .......-+.+|...++.||+|+++-+..
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 344444 334 56778888999999999999999876644
No 189
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=24.94 E-value=93 Score=27.16 Aligned_cols=32 Identities=9% Similarity=0.114 Sum_probs=23.4
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 12 ~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
++++++ |+.|-+- ..+++.|+++|++|+++.-
T Consensus 7 k~vlVT-Gas~gIG--~~ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 7 KVIILT-AAAQGIG--QAAALAFAREGAKVIATDI 38 (246)
T ss_dssp CEEEES-STTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCCcHHH--HHHHHHHHHCCCEEEEEEC
Confidence 566777 4445443 5788999999999988753
No 190
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=24.92 E-value=65 Score=31.36 Aligned_cols=31 Identities=13% Similarity=0.109 Sum_probs=25.9
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|+|.++-.|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 488999888777 4688999999999998854
No 191
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=24.90 E-value=48 Score=30.04 Aligned_cols=31 Identities=23% Similarity=0.111 Sum_probs=25.7
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
++|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 589999887777 4578999999999998864
No 192
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=24.79 E-value=1e+02 Score=25.52 Aligned_cols=32 Identities=9% Similarity=0.091 Sum_probs=23.9
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
++|+++ |+.|-+- ..|++.|.++||+|+.++-
T Consensus 4 ~~ilVt--GatG~iG--~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIF--GATGQTG--LTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHHCCCeEEEEEe
Confidence 566665 5666553 5778999999999999864
No 193
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=24.63 E-value=1.1e+02 Score=25.32 Aligned_cols=28 Identities=25% Similarity=0.322 Sum_probs=24.0
Q ss_pred eeEEeeccccCCCHHHHHHHHHHHHhCC
Q 012342 268 VIYVNFGSFIFMNKQQLIEVAMGLVNSN 295 (465)
Q Consensus 268 ~V~vs~GS~~~~~~~~~~~~~~al~~~~ 295 (465)
.+|+++||......+.+...+.+|.+.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999998778888999999998754
No 194
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=24.57 E-value=1.1e+02 Score=27.20 Aligned_cols=34 Identities=12% Similarity=0.085 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
+++|+++. + |.+-- .|++.|.++||+|+.++-..
T Consensus 5 ~~~ilVtG--a-G~iG~--~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG--H-GYTAR--VLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET--C-CHHHH--HHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEEC--C-cHHHH--HHHHHHHHCCCEEEEEEcCh
Confidence 35777774 5 76654 67899999999999987543
No 195
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=24.45 E-value=86 Score=29.57 Aligned_cols=20 Identities=15% Similarity=0.162 Sum_probs=15.5
Q ss_pred hHHHHHHHcCCCeEEEcCCc
Q 012342 99 FTITAAQQLGLPIVLFFTIS 118 (465)
Q Consensus 99 ~~~~vA~~lgiP~v~~~~~~ 118 (465)
....+|+.+|||+++..++.
T Consensus 252 ~lAl~Ak~~~vPfyV~ap~~ 271 (347)
T 1t9k_A 252 SLAVLAKRNNIPFYVAAPVS 271 (347)
T ss_dssp HHHHHHHHTTCCEEEECCGG
T ss_pred HHHHHHHHcCCCEEEecccc
Confidence 35567899999999986653
No 196
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=24.28 E-value=81 Score=28.73 Aligned_cols=38 Identities=21% Similarity=0.406 Sum_probs=30.0
Q ss_pred CCCEEEEEcCCCCccHHHH--HHHHHHHHhCC-CEEEEEeCC
Q 012342 9 SKVHAVCIPSPFQSHIKAM--LKLAKLLHHKG-FHITFVNTE 47 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~--l~La~~L~~rG-h~Vt~~t~~ 47 (465)
++.||||++ +..+|-.+- -.|++.|.+.| ++|++...+
T Consensus 3 ~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 488999995 666886554 57788888888 999999764
No 197
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=24.27 E-value=43 Score=31.14 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=20.3
Q ss_pred ccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 22 SHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 22 GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
|.+- .++|+.+.++|++|||++.+.
T Consensus 65 GkmG--~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 65 GRRG--ATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp CHHH--HHHHHHHHHTTCEEEEEEETT
T ss_pred cHHH--HHHHHHHHHCCCEEEEEecCC
Confidence 5554 368899999999999998754
No 198
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=24.22 E-value=44 Score=25.02 Aligned_cols=32 Identities=13% Similarity=0.209 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCC-CEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKG-FHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rG-h~Vt~~t~ 46 (465)
.++|+++..|..| ..+++.|.++| ++|+++.-
T Consensus 5 ~~~v~I~G~G~iG-----~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 5 RWNICVVGAGKIG-----QMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHCSSEEEEEEES
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCceEEEEeC
Confidence 4578887544444 46788999999 99988764
No 199
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=24.20 E-value=2.8e+02 Score=22.68 Aligned_cols=86 Identities=10% Similarity=-0.067 Sum_probs=49.1
Q ss_pred ceeEEeeccccCCC-HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcce
Q 012342 267 SVIYVNFGSFIFMN-KQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGG 345 (465)
Q Consensus 267 ~~V~vs~GS~~~~~-~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~ 345 (465)
..+|++..=+.... .+...++.+.|++.|..+++ ... .......... --....+..+++-.
T Consensus 11 ~~~y~a~~~F~~~e~~~~~~~l~~~l~~~G~~v~~--P~~----~~~~~~~~i~------------~~d~~~i~~aD~vV 72 (161)
T 2f62_A 11 KIYIAGPAVFNPDMGASYYNKVRELLKKENVMPLI--PTD----NEATEALDIR------------QKNIQMIKDCDAVI 72 (161)
T ss_dssp EEEEESGGGGSTTTTHHHHHHHHHHHHTTTCEEEC--TTT----TCCSSHHHHH------------HHHHHHHHHCSEEE
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEC--CCc----cCcchHHHHH------------HHHHHHHHhCCEEE
Confidence 46676644444455 67788899999988875432 111 0000111110 01245666677622
Q ss_pred ee-e-----cCCchhHHHH---HhcCCcEEecCC
Q 012342 346 FL-T-----HCGWNSIVES---LCSGVPMICWPF 370 (465)
Q Consensus 346 ~i-~-----hgG~~s~~ea---l~~GvP~i~~P~ 370 (465)
++ + ..-+||..|. ...|+|++++-.
T Consensus 73 A~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~~ 106 (161)
T 2f62_A 73 ADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFTS 106 (161)
T ss_dssp EECCCCSSSSCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEEc
Confidence 33 1 2458899986 789999999753
No 200
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=24.10 E-value=4.7e+02 Score=26.91 Aligned_cols=65 Identities=14% Similarity=0.309 Sum_probs=40.5
Q ss_pred cceeeecCCc------hhHHHHHhcCCcEEecCC-------------CCChhhHHHhhcccceeEEEEecCCCCCCHHHH
Q 012342 343 IGGFLTHCGW------NSIVESLCSGVPMICWPF-------------TGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEV 403 (465)
Q Consensus 343 ~~~~i~hgG~------~s~~eal~~GvP~i~~P~-------------~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l 403 (465)
.++++++.|- +.+.||.+.++|+|++-- ..||....+-+ .++ ...+.. ..--.+.|
T Consensus 146 pgvv~~TsGpG~~N~~~gia~A~~d~vPllvItG~~~~~~~g~~a~Q~~Dq~~i~~~~-tk~--~~~v~~--~~~i~~~i 220 (677)
T 1t9b_A 146 PGVVLVTSGPGATNVVTPMADAFADGIPMVVFTGQVPTSAIGTDAFQEADVVGISRSC-TKW--NVMVKS--VEELPLRI 220 (677)
T ss_dssp CEEEEECSTHHHHTTHHHHHHHHHHTCCEEEEEEECCTTTTTSCCTTCCCHHHHTGGG-SSE--EEECCS--GGGHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHHHcCCCEEEEeCCCChhhcCCCCccccCHHHHhhhh-eeE--EEEcCC--HHHHHHHH
Confidence 4459999995 478899999999999843 33666666655 322 334432 22234556
Q ss_pred HHHHHHHhc
Q 012342 404 EKLVREMME 412 (465)
Q Consensus 404 ~~ai~~~l~ 412 (465)
.+|++..+.
T Consensus 221 ~~A~~~A~~ 229 (677)
T 1t9b_A 221 NEAFEIATS 229 (677)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhh
Confidence 666655543
No 201
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=24.03 E-value=63 Score=26.96 Aligned_cols=36 Identities=11% Similarity=0.172 Sum_probs=28.4
Q ss_pred CEEEEEcCCCCc-----cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 11 VHAVCIPSPFQS-----HIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 11 ~~il~~~~~~~G-----H~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
-+|+++| ++| =-++.-.|++.|.++|.+|.|..+|-
T Consensus 31 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITP--GYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEEC--SBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3677776 333 24689999999999999999999864
No 202
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=23.92 E-value=37 Score=30.77 Aligned_cols=52 Identities=21% Similarity=0.330 Sum_probs=36.6
Q ss_pred CCcceeeecCCchhHHHHHhc------CCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcC
Q 012342 341 PSIGGFLTHCGWNSIVESLCS------GVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEG 413 (465)
Q Consensus 341 ~~~~~~i~hgG~~s~~eal~~------GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~ 413 (465)
+++ +|.=||=||+.+++.. ++|++++|.. .+|. + ..+.++++.++++.++++
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G------------~lgf---l----~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG------------HLGF---Y----ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS------------SCCS---S----CCBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC------------CCCc---C----CcCCHHHHHHHHHHHHcC
Confidence 455 9999999999999764 8999998761 1121 1 223566777788777754
No 203
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=23.91 E-value=90 Score=28.28 Aligned_cols=40 Identities=10% Similarity=0.106 Sum_probs=33.1
Q ss_pred CCEEEEEcCC---CCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012342 10 KVHAVCIPSP---FQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (465)
Q Consensus 10 ~~~il~~~~~---~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (465)
.+|.+|++-| +.|-=.-.-.|+..|..||++||..--.+|
T Consensus 22 ~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp CCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred cceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 6899999986 667767788899999999999999865443
No 204
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=23.90 E-value=84 Score=28.74 Aligned_cols=35 Identities=23% Similarity=0.215 Sum_probs=24.7
Q ss_pred CCCCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 8 CSKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
++.++|++. |+.|-+- ..|++.|.++||+|+.+.-
T Consensus 12 ~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r 46 (335)
T 1rpn_A 12 SMTRSALVT--GITGQDG--AYLAKLLLEKGYRVHGLVA 46 (335)
T ss_dssp ---CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred ccCCeEEEE--CCCChHH--HHHHHHHHHCCCeEEEEeC
Confidence 456787665 5666664 4688999999999998864
No 205
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=23.61 E-value=57 Score=31.01 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEe
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVN 45 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t 45 (465)
+.+|+|+-.|--| +.+|..|+++|++|+++=
T Consensus 26 ~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E 56 (398)
T 2xdo_A 26 DKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYE 56 (398)
T ss_dssp TCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEE
T ss_pred CCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEe
Confidence 5689999988666 778999999999999984
No 206
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=23.58 E-value=69 Score=29.41 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (465)
+|+|+++..+ ....+++.+.++||+|.++.....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 5799998866 467889999999999999876543
No 207
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=23.54 E-value=1.5e+02 Score=25.20 Aligned_cols=103 Identities=12% Similarity=0.037 Sum_probs=56.5
Q ss_pred hhhhhhhcccCCCCceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCch-hHHHHhccCceEeec
Q 012342 253 ETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPA-EFEVKAKEKGFVASW 331 (465)
Q Consensus 253 ~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~ 331 (465)
..++-++|.+.. ...|+-|.- ........++..+.+-.++=++... +.. +..+..-.+..+...
T Consensus 22 A~~lg~~La~~g---~~lV~GGg~----~GiM~aa~~gA~~~gG~~iGv~p~~--------l~~~e~~~~~~~~~~~~~~ 86 (191)
T 1t35_A 22 AAELGVYMAEQG---IGLVYGGSR----VGLMGTIADAIMENGGTAIGVMPSG--------LFSGEVVHQNLTELIEVNG 86 (191)
T ss_dssp HHHHHHHHHHTT---CEEEECCCC----SHHHHHHHHHHHTTTCCEEEEEETT--------CCHHHHTTCCCSEEEEESH
T ss_pred HHHHHHHHHHCC---CEEEECCCc----ccHHHHHHHHHHHcCCeEEEEeCch--------hcccccccCCCCccccCCC
Confidence 345666665543 566665432 1335556666666666666555432 111 110000112234555
Q ss_pred cChh-hhhcCCCcceeeecCCchhHHHH---H------hcCCcEEecCC
Q 012342 332 CPQE-EVLKHPSIGGFLTHCGWNSIVES---L------CSGVPMICWPF 370 (465)
Q Consensus 332 ~p~~-~~l~~~~~~~~i~hgG~~s~~ea---l------~~GvP~i~~P~ 370 (465)
.+.+ .++..-+.+.++--||.||.-|. + .+++|++.+..
T Consensus 87 ~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 87 MHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred HHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 5653 34443344568889999998765 4 27899999865
No 208
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=23.45 E-value=84 Score=27.33 Aligned_cols=34 Identities=3% Similarity=0.126 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+.++++++ |+.|-+- .++++.|+++|++|+++.-
T Consensus 6 ~~k~vlVT-Gas~gIG--~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 6 EARRVLVY-GGRGALG--SRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp CCCEEEEE-TTTSHHH--HHHHHHHHTTTCEEEEEES
T ss_pred CCCEEEEE-CCCcHHH--HHHHHHHHhCCCEEEEEeC
Confidence 34566677 4444443 5789999999999988753
No 209
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=23.43 E-value=3e+02 Score=27.85 Aligned_cols=66 Identities=17% Similarity=0.063 Sum_probs=42.5
Q ss_pred CcceeeecCCc------hhHHHHHhcCCcEEecC-------------CCCChhhHHHhhcccceeEEEEecCCCCC----
Q 012342 342 SIGGFLTHCGW------NSIVESLCSGVPMICWP-------------FTGDQPTNGRYVCNEWGVGMEINGDDEDV---- 398 (465)
Q Consensus 342 ~~~~~i~hgG~------~s~~eal~~GvP~i~~P-------------~~~DQ~~na~~~~~~~g~g~~~~~~~~~~---- 398 (465)
..+++++|.|- +.+.||-+.++|+|++- ...||....+-+ .++ ...+.. ..-
T Consensus 94 kpgv~~~TsGpG~~N~~~gia~A~~~~vPlv~ItG~~~~~~~g~~~~Q~~d~~~~~~~~-tk~--~~~v~~--~~~~~~~ 168 (604)
T 2x7j_A 94 RPVLLICTSGTAAANFYPAVVEAHYSRVPIIVLTADRPHELREVGAPQAINQHFLFGNF-VKF--FTDSAL--PEESPQM 168 (604)
T ss_dssp SCEEEEECSSHHHHTTHHHHHHHHHHTCCEEEEEEECCGGGSSSCCTTCCCCTTTTGGG-SSC--EEECCC--CCCSHHH
T ss_pred CCEEEEECChhHHHHHHHHHHHHhhcCCCEEEEeCCCCHHHhCCCCCCcCcHHHHhhhh-eee--eeecCC--Ccccchh
Confidence 34459999996 57889999999999985 233666655555 322 344532 221
Q ss_pred ---CHHHHHHHHHHHhc
Q 012342 399 ---IRNEVEKLVREMME 412 (465)
Q Consensus 399 ---~~~~l~~ai~~~l~ 412 (465)
-.+.|.+|++..+.
T Consensus 169 ~~~~~~~i~~A~~~A~~ 185 (604)
T 2x7j_A 169 LRYIRTLASRAAGEAQK 185 (604)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 35677777776653
No 210
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=23.41 E-value=50 Score=30.60 Aligned_cols=32 Identities=9% Similarity=-0.065 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCC-CEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKG-FHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rG-h~Vt~~t~ 46 (465)
.++|.|+-.|..| ..+|+.|++.| |+|+++..
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr 56 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDL 56 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeC
Confidence 4689999988888 67899999999 99998864
No 211
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=23.36 E-value=2.5e+02 Score=23.11 Aligned_cols=138 Identities=12% Similarity=0.065 Sum_probs=73.2
Q ss_pred ceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCccee
Q 012342 267 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGF 346 (465)
Q Consensus 267 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~ 346 (465)
+.|-|-+||.. +.+..++....|+..|.++=+.+-+... .|+.+.+-. .=.....+++|
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR------~p~~~~~~~-------------~~a~~~g~~Vi 62 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSAHR------TPKMMVQFA-------------SEARERGINII 62 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT------SHHHHHHHH-------------HHTTTTTCCEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECCcC------CHHHHHHHH-------------HHHHhCCCcEE
Confidence 46777778876 5667778888888888887665554321 343332110 00111122338
Q ss_pred eecCCch----hHHHHHhcCCcEEecCCCCChh-hHHHhh--cc-ccee--EEEEecCCC---CCCHHHHHHHHHHHhcC
Q 012342 347 LTHCGWN----SIVESLCSGVPMICWPFTGDQP-TNGRYV--CN-EWGV--GMEINGDDE---DVIRNEVEKLVREMMEG 413 (465)
Q Consensus 347 i~hgG~~----s~~eal~~GvP~i~~P~~~DQ~-~na~~~--~~-~~g~--g~~~~~~~~---~~~~~~l~~ai~~~l~~ 413 (465)
|.=+|.. ++..+ ..-+|+|.+|....-. .....+ .+ --|+ +.. .. + ..++.-+...|.. +.|
T Consensus 63 Ia~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV-~I--~~a~~~nAa~lAa~Il~-~~d 137 (163)
T 3ors_A 63 IAGAGGAAHLPGMVAS-LTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATT-AI--GAAGAKNAGILAARMLS-IQN 137 (163)
T ss_dssp EEEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEEC-CS--THHHHHHHHHHHHHHHH-TTC
T ss_pred EEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEE-Ec--CCcccHHHHHHHHHHHh-CCC
Confidence 8777744 33333 3568999999854321 111111 01 1243 322 11 2 2234444444432 356
Q ss_pred ChHHHHHHHHHHHHHHHHHH
Q 012342 414 EKGKQMRNKAMEWKGLAEEA 433 (465)
Q Consensus 414 ~~~~~~~~~a~~l~~~~~~~ 433 (465)
+. ++++.+++++.+++.
T Consensus 138 ~~---l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 138 PS---LVEKLNQYESSLIQK 154 (163)
T ss_dssp TH---HHHHHHHHHHHHHHH
T ss_pred HH---HHHHHHHHHHHHHHH
Confidence 66 888888888877753
No 212
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=23.36 E-value=51 Score=29.90 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=26.0
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|+|.|+-.|..|. .+|+.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 4789998888886 578999999999998854
No 213
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=23.34 E-value=80 Score=31.28 Aligned_cols=33 Identities=9% Similarity=0.058 Sum_probs=29.0
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhC-CC-EEEEEeCC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK-GF-HITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~r-Gh-~Vt~~t~~ 47 (465)
.++|.++-.|..| +.+|..|+++ || +|+++-..
T Consensus 18 ~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~ 52 (478)
T 3g79_A 18 IKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRN 52 (478)
T ss_dssp CCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECC
Confidence 5799999999999 5789999999 99 99998653
No 214
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=23.22 E-value=52 Score=30.75 Aligned_cols=33 Identities=9% Similarity=0.119 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCC-EEEEEeCC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGF-HITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh-~Vt~~t~~ 47 (465)
++||.++-.|..|.- ||..|+..|| +|+++-..
T Consensus 9 ~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEECC
Confidence 679999976655543 8899999999 98887543
No 215
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=22.99 E-value=73 Score=28.87 Aligned_cols=32 Identities=13% Similarity=0.054 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+++|.|+-.|..|. .+++.|.+.||+|+++..
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 67999999888886 468889999999998753
No 216
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=22.86 E-value=93 Score=25.63 Aligned_cols=28 Identities=21% Similarity=0.211 Sum_probs=22.9
Q ss_pred eeEEeeccccCCCHHHHHHHHHHHHhCC
Q 012342 268 VIYVNFGSFIFMNKQQLIEVAMGLVNSN 295 (465)
Q Consensus 268 ~V~vs~GS~~~~~~~~~~~~~~al~~~~ 295 (465)
.+|+++||........+...+.+|.+.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999988666777888888888753
No 217
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=22.76 E-value=80 Score=28.17 Aligned_cols=23 Identities=22% Similarity=0.359 Sum_probs=19.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcch
Q 012342 27 MLKLAKLLHHKGFHITFVNTEFNH 50 (465)
Q Consensus 27 ~l~La~~L~~rGh~Vt~~t~~~~~ 50 (465)
+..|++.|.+.| +|+++.|....
T Consensus 16 i~aL~~~l~~~g-~V~VVAP~~~~ 38 (247)
T 1j9j_A 16 IIVLAELLSEEH-EVFVVAPDKER 38 (247)
T ss_dssp HHHHHHHHTTTS-EEEEEEESSCC
T ss_pred HHHHHHHHHhCC-CEEEEecCCCC
Confidence 678899999888 99999987765
No 218
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=22.74 E-value=3.2e+02 Score=27.31 Aligned_cols=64 Identities=23% Similarity=0.174 Sum_probs=40.1
Q ss_pred ceeeecCCc------hhHHHHHhcCCcEEecCCC---------------CChhhHHHhhcccceeEEEEecCCCCCCHHH
Q 012342 344 GGFLTHCGW------NSIVESLCSGVPMICWPFT---------------GDQPTNGRYVCNEWGVGMEINGDDEDVIRNE 402 (465)
Q Consensus 344 ~~~i~hgG~------~s~~eal~~GvP~i~~P~~---------------~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 402 (465)
+++++|.|- +.+.||-+.++|+|++--. .||....+-+ . +....+.. ..--.+.
T Consensus 74 gv~~~TsGpG~~N~~~~i~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~-t--k~~~~v~~--~~~~~~~ 148 (568)
T 2c31_A 74 GVCLTVSAPGFLNGVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEEMDQMNVARPH-C--KASFRINS--IKDIPIG 148 (568)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTCCCHHHHSGGG-S--SEEEECCS--GGGHHHH
T ss_pred EEEEEcCCccHHHHHHHHHHHHhcCCCEEEEccCCCccccCCCCCcccccCHHHHHHhh-h--heeeecCC--HHHHHHH
Confidence 349999996 4677999999999998431 1444444444 2 22344532 2234567
Q ss_pred HHHHHHHHhc
Q 012342 403 VEKLVREMME 412 (465)
Q Consensus 403 l~~ai~~~l~ 412 (465)
|.+|++..+.
T Consensus 149 i~~A~~~A~~ 158 (568)
T 2c31_A 149 IARAVRTAVS 158 (568)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHhcC
Confidence 7777777765
No 219
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=22.73 E-value=4e+02 Score=23.75 Aligned_cols=105 Identities=10% Similarity=-0.005 Sum_probs=63.9
Q ss_pred hhhhhcccCCCCceeEEe--eccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeecc
Q 012342 255 ECLQWLDCKEPKSVIYVN--FGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWC 332 (465)
Q Consensus 255 ~l~~~l~~~~~~~~V~vs--~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 332 (465)
.+..+++.-+. .+.|+ +||....+.+.+..+++.|.+.|.-|| .+.. -+..
T Consensus 115 ~l~~al~~vP~--a~GvnNHmGS~~T~~~~~M~~vm~~L~~~gL~Fl---DS~T-------s~~S--------------- 167 (261)
T 2qv5_A 115 RLHRSMAKITN--YTGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFL---DDGS-------SAQS--------------- 167 (261)
T ss_dssp HHHHHHTTCCC--CSEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEE---ECSC-------CTTC---------------
T ss_pred HHHHHHHHCCC--cEEEecccccchhcCHHHHHHHHHHHHHCCCEEE---cCCC-------Cccc---------------
Confidence 45556666665 66666 888887788888999999988665444 1110 0000
Q ss_pred ChhhhhcCCCcceeeecCCchhHHHHHhcCCcEEecCCCCC----------hhhHHHhhcccceeEEEEecCCCCCCHHH
Q 012342 333 PQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGD----------QPTNGRYVCNEWGVGMEINGDDEDVIRNE 402 (465)
Q Consensus 333 p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~D----------Q~~na~~~~~~~g~g~~~~~~~~~~~~~~ 402 (465)
-.-..|-..|||.+..=.+.| |..-+..++++.|.++.+ ....++.
T Consensus 168 --------------------~a~~~A~~~gvp~~~rdvFLD~~~~~~~I~~qL~~a~~~Ar~~G~AIaI----Ghp~p~T 223 (261)
T 2qv5_A 168 --------------------LSGGIAKAISAPQGFADVLLDGEVTEASILRKLDDLERIARRNGQAIGV----ASAFDES 223 (261)
T ss_dssp --------------------CHHHHHHHHTCCEEECSEETTSSCSHHHHHHHHHHHHHHHHHHSEEEEE----EECCHHH
T ss_pred --------------------HHHHHHHHcCCCeEEeeeecCCCCCHHHHHHHHHHHHHHHHhcCcEEEE----eCCCHHH
Confidence 011234566777777665554 566666666778988888 4455665
Q ss_pred HHHHHHHHh
Q 012342 403 VEKLVREMM 411 (465)
Q Consensus 403 l~~ai~~~l 411 (465)
| ++|++.+
T Consensus 224 i-~aL~~~~ 231 (261)
T 2qv5_A 224 I-AAISKWS 231 (261)
T ss_dssp H-HHHHHHH
T ss_pred H-HHHHHHh
Confidence 5 4454443
No 220
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=22.48 E-value=1.1e+02 Score=24.45 Aligned_cols=39 Identities=10% Similarity=0.070 Sum_probs=30.6
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012342 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (465)
Q Consensus 12 ~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~ 50 (465)
-.+++..+..-.+++-+.+|...++.|++|+++-+..-.
T Consensus 10 l~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv 48 (144)
T 2qs7_A 10 LSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGL 48 (144)
T ss_dssp EEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHH
Confidence 445555567888999999999999999999998774433
No 221
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=22.40 E-value=44 Score=28.86 Aligned_cols=28 Identities=18% Similarity=0.255 Sum_probs=23.4
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEE
Q 012342 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFV 44 (465)
Q Consensus 12 ~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~ 44 (465)
.|+|+-.|--| +.+|..|+++|++|+++
T Consensus 4 dV~IIGaGpaG-----L~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 4 PIAIIGTGIAG-----LSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CEEEECCSHHH-----HHHHHHHHHTTCCEEEE
T ss_pred CEEEECcCHHH-----HHHHHHHHHCCCCEEEE
Confidence 47777766555 78999999999999998
No 222
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=22.35 E-value=55 Score=27.96 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=23.7
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
|+|+++ |+.|-+- ..+++.|+++||+|+.+.-
T Consensus 1 M~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R 32 (219)
T 3dqp_A 1 MKIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGAR 32 (219)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHTTSSCEEEEEES
T ss_pred CeEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 366555 4555554 5788999999999999874
No 223
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=22.26 E-value=2.8e+02 Score=23.14 Aligned_cols=141 Identities=12% Similarity=0.102 Sum_probs=73.8
Q ss_pred ceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCccee
Q 012342 267 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGF 346 (465)
Q Consensus 267 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~ 346 (465)
+.|-|-+||.. +.+..++....|+..|.++-+.+-+... .|+.+.+-. .=.....+++|
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~SaHR------~p~~~~~~~-------------~~a~~~g~~Vi 71 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSAHR------TPDRLFSFA-------------EQAEANGLHVI 71 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT------CHHHHHHHH-------------HHTTTTTCSEE
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC------CHHHHHHHH-------------HHHHhCCCcEE
Confidence 46777788876 5666778888888889887665554331 343332210 00111222338
Q ss_pred eecCCchhHHHHH---hcCCcEEecCCCCChh-hHHHhh--cc-cceeEEE-EecCCC---CCCHHHHHHHHHHHhcCCh
Q 012342 347 LTHCGWNSIVESL---CSGVPMICWPFTGDQP-TNGRYV--CN-EWGVGME-INGDDE---DVIRNEVEKLVREMMEGEK 415 (465)
Q Consensus 347 i~hgG~~s~~eal---~~GvP~i~~P~~~DQ~-~na~~~--~~-~~g~g~~-~~~~~~---~~~~~~l~~ai~~~l~~~~ 415 (465)
|.=+|...-+-.+ ..-+|+|.+|....-. .....+ ++ --|+.+. +.. + ..++.-+...|. -+.|+.
T Consensus 72 Ia~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I--~~a~~~nAa~lAa~IL-a~~d~~ 148 (174)
T 3kuu_A 72 IAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAI--GKAGAANAALLAAQIL-ALHDTE 148 (174)
T ss_dssp EEEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCS--SHHHHHHHHHHHHHHH-HTTCHH
T ss_pred EEECChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEe--CCccchHHHHHHHHHH-cCCCHH
Confidence 8877754333222 3468999999853211 111111 01 1243211 111 1 123334443333 235666
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 012342 416 GKQMRNKAMEWKGLAEEAA 434 (465)
Q Consensus 416 ~~~~~~~a~~l~~~~~~~~ 434 (465)
++++.+++++.+++.+
T Consensus 149 ---l~~kl~~~r~~~~~~v 164 (174)
T 3kuu_A 149 ---LAGRLAHWRQSQTDDV 164 (174)
T ss_dssp ---HHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHH
Confidence 8888888888887654
No 224
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=22.22 E-value=2.3e+02 Score=23.51 Aligned_cols=139 Identities=13% Similarity=0.090 Sum_probs=71.7
Q ss_pred ceeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCccee
Q 012342 267 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGF 346 (465)
Q Consensus 267 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~ 346 (465)
+.|-|-+||.. +.+..++....|+..|.++-+.+-+... .|+.+.+-. -.. --...++ |
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR------~p~~~~~~~----------~~a-~~~g~~V--i 65 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSAHR------TPKETVEFV----------ENA-DNRGCAV--F 65 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT------SHHHHHHHH----------HHH-HHTTEEE--E
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcccC------CHHHHHHHH----------HHH-HhCCCcE--E
Confidence 46777788876 5666778888888888887666554331 343332210 000 0012233 8
Q ss_pred eecCCchhHHHHH---hcCCcEEecCCCCChh-hHHHhh--cc-cceeEEE-EecCCC---CCCHHHHHHHHHHHhcCCh
Q 012342 347 LTHCGWNSIVESL---CSGVPMICWPFTGDQP-TNGRYV--CN-EWGVGME-INGDDE---DVIRNEVEKLVREMMEGEK 415 (465)
Q Consensus 347 i~hgG~~s~~eal---~~GvP~i~~P~~~DQ~-~na~~~--~~-~~g~g~~-~~~~~~---~~~~~~l~~ai~~~l~~~~ 415 (465)
|.=+|...-+-.+ ..-+|+|.+|...... .....+ ++ --|+.+. +.. + ..++.-+...|. -+.|+.
T Consensus 66 Ia~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I--~~a~~~nAa~lAa~Il-~~~d~~ 142 (169)
T 3trh_A 66 IAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAI--GKAGAKNAAILAAQII-ALQDKS 142 (169)
T ss_dssp EEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCS--THHHHHHHHHHHHHHH-HTTCHH
T ss_pred EEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEec--CCccchHHHHHHHHHH-cCCCHH
Confidence 8777754333222 3468999999853221 122111 01 1243211 111 1 113333333332 235665
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012342 416 GKQMRNKAMEWKGLAEE 432 (465)
Q Consensus 416 ~~~~~~~a~~l~~~~~~ 432 (465)
++++.+.+++.+++
T Consensus 143 ---l~~kl~~~r~~~~~ 156 (169)
T 3trh_A 143 ---IAQKLVQQRTAKRE 156 (169)
T ss_dssp ---HHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHH
Confidence 88888888877775
No 225
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=22.14 E-value=91 Score=31.11 Aligned_cols=39 Identities=10% Similarity=0.154 Sum_probs=30.2
Q ss_pred CCCEEEEEcCCCCcc--HHHHHHHHHH--HHhCCCEEEEEeCC
Q 012342 9 SKVHAVCIPSPFQSH--IKAMLKLAKL--LHHKGFHITFVNTE 47 (465)
Q Consensus 9 ~~~~il~~~~~~~GH--~~P~l~La~~--L~~rGh~Vt~~t~~ 47 (465)
.++||+++.....+| -.-++.|++. |.+.||+|++++..
T Consensus 204 ~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 204 GPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 478999998765544 3456788999 67789999999863
No 226
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=21.99 E-value=77 Score=29.54 Aligned_cols=42 Identities=7% Similarity=0.004 Sum_probs=27.0
Q ss_pred CCCCCCCCCCCEEEEEcCCCCccHHHHHHHHHHHHh--CCCEEEEEeC
Q 012342 1 MESKPKACSKVHAVCIPSPFQSHIKAMLKLAKLLHH--KGFHITFVNT 46 (465)
Q Consensus 1 m~~~~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~--rGh~Vt~~t~ 46 (465)
|..|......++|++. |+.|-+- ..|++.|++ +||+|+.+.-
T Consensus 1 M~~~~~~~~~~~vlVT--GatG~IG--~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 1 MRYIDDELENQTILIT--GGAGFVG--SNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp CCSSSCCCTTCEEEEE--TTTSHHH--HHHHHHHHHHCTTSEEEEEEC
T ss_pred CcccchhcCCCEEEEE--CCCCHHH--HHHHHHHHhhCCCCeEEEEEC
Confidence 4444322324566555 5556554 367889999 9999999864
No 227
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=21.99 E-value=1e+02 Score=23.78 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=28.1
Q ss_pred CCEEEEEcCCCCccH--HHHHHHHHHHHhCC--CEEEEEeCCcch
Q 012342 10 KVHAVCIPSPFQSHI--KAMLKLAKLLHHKG--FHITFVNTEFNH 50 (465)
Q Consensus 10 ~~~il~~~~~~~GH~--~P~l~La~~L~~rG--h~Vt~~t~~~~~ 50 (465)
++|++|+-+-..-.. +--+..|....++| |+|.++.-..-.
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v 51 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASV 51 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCee
Confidence 578877776532222 23577888899999 899998765444
No 228
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=21.95 E-value=73 Score=28.77 Aligned_cols=31 Identities=6% Similarity=0.213 Sum_probs=25.6
Q ss_pred CEEEEEcC-CCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPS-PFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~-~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
++|.|+-. |..| ..+|+.|.++||+|+++..
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 59999988 7777 4578899999999998754
No 229
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=21.81 E-value=1.1e+02 Score=25.72 Aligned_cols=36 Identities=11% Similarity=0.127 Sum_probs=29.7
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
..++++-.+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 356666678888888899999999999999988754
No 230
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=21.80 E-value=60 Score=31.88 Aligned_cols=33 Identities=12% Similarity=0.229 Sum_probs=27.2
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
+|+|.|+-.|..| +.+|..|+++||+|+++...
T Consensus 2 ~mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 2 SLDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 3699999887777 46899999999999988653
No 231
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=21.75 E-value=49 Score=30.56 Aligned_cols=32 Identities=13% Similarity=0.028 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCC-EEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGF-HITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh-~Vt~~t~ 46 (465)
.++|.|+-.|..| ..+|+.|++.|| +|+++..
T Consensus 24 ~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 24 AMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 5799999888877 478999999999 9998865
No 232
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=21.73 E-value=41 Score=33.37 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=28.3
Q ss_pred CCCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+|++|.|+-.|..|- .||+.|+++||+|+++.-
T Consensus 14 ~~~~IgvIGlG~MG~-----~lA~~La~~G~~V~v~~r 46 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGR-----NLALNIESRGYTVSIFNR 46 (480)
T ss_dssp -CBSEEEECCSHHHH-----HHHHHHHTTTCCEEEECS
T ss_pred CCCeEEEEccHHHHH-----HHHHHHHhCCCeEEEEeC
Confidence 388999999998884 589999999999998864
No 233
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=21.72 E-value=1.8e+02 Score=22.65 Aligned_cols=48 Identities=21% Similarity=0.183 Sum_probs=32.4
Q ss_pred cCCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcC
Q 012342 361 SGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEG 413 (465)
Q Consensus 361 ~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~ 413 (465)
..+|+|++--..+.......+ +.|+--.+. +.++.++|..+|++++..
T Consensus 74 ~~~pii~ls~~~~~~~~~~~~--~~g~~~~l~---kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGDIPMAVQAI--QDGAYDFIA---KPFAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGGHHHHHHHH--HTTCCEEEE---SSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHH--hcCCCeEEe---CCCCHHHHHHHHHHHHHH
Confidence 478988886655544433333 356644454 568999999999999853
No 234
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=21.70 E-value=2.3e+02 Score=25.75 Aligned_cols=80 Identities=10% Similarity=0.021 Sum_probs=47.8
Q ss_pred eeEEeeccccCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcCCCchhHHHHhccCceEeeccChhhhhcCCCcceee
Q 012342 268 VIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFL 347 (465)
Q Consensus 268 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~~~~~~~i 347 (465)
.|+++--|-.....+.+.++...|++.+..+.+..... +....+-. .++....++ +|
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~---------~~~a~~~~------------~~~~~~~d~--vv 68 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE---------QGDATKYC------------QEFASKVDL--II 68 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS---------TTHHHHHH------------HHHTTTCSE--EE
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC---------cchHHHHH------------HHhhcCCCE--EE
Confidence 45555444333234556677788888787776654322 11111100 011123455 99
Q ss_pred ecCCchhHHHHHh------cCCcEEecCC
Q 012342 348 THCGWNSIVESLC------SGVPMICWPF 370 (465)
Q Consensus 348 ~hgG~~s~~eal~------~GvP~i~~P~ 370 (465)
.-||=||+.|++. .++|+.++|.
T Consensus 69 ~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 69 VFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp EEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 9999999999864 5799999998
No 235
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=21.69 E-value=28 Score=34.37 Aligned_cols=39 Identities=21% Similarity=0.209 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLK 55 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~ 55 (465)
.|||+++.+|-.|. .||+.|.+.||+|+++=. +.+.++.
T Consensus 3 ~M~iiI~G~G~vG~-----~la~~L~~~~~~v~vId~--d~~~~~~ 41 (461)
T 4g65_A 3 AMKIIILGAGQVGG-----TLAENLVGENNDITIVDK--DGDRLRE 41 (461)
T ss_dssp CEEEEEECCSHHHH-----HHHHHTCSTTEEEEEEES--CHHHHHH
T ss_pred cCEEEEECCCHHHH-----HHHHHHHHCCCCEEEEEC--CHHHHHH
Confidence 68999999887774 699999999999999964 3444443
No 236
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=21.66 E-value=58 Score=29.47 Aligned_cols=31 Identities=19% Similarity=0.152 Sum_probs=26.3
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
++|.|+-.|..|. .+|+.|+++||+|+++..
T Consensus 2 ~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHHTCCEEEECS
T ss_pred CeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcC
Confidence 3799999888885 578999999999999864
No 237
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=21.43 E-value=1.3e+02 Score=26.81 Aligned_cols=41 Identities=22% Similarity=0.307 Sum_probs=27.1
Q ss_pred CEEEEEcCCC--CccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 012342 11 VHAVCIPSPF--QSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLL 54 (465)
Q Consensus 11 ~~il~~~~~~--~GH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~ 54 (465)
-|+++++-++ .| + =.++|+.|+++|++|.++.-....+.++
T Consensus 26 ~k~vlVTGasg~~G-I--G~~ia~~l~~~G~~V~~~~r~~~~~~~~ 68 (280)
T 3nrc_A 26 GKKILITGLLSNKS-I--AYGIAKAMHREGAELAFTYVGQFKDRVE 68 (280)
T ss_dssp TCEEEECCCCSTTC-H--HHHHHHHHHHTTCEEEEEECTTCHHHHH
T ss_pred CCEEEEECCCCCCC-H--HHHHHHHHHHcCCEEEEeeCchHHHHHH
Confidence 3677777543 22 2 2678999999999998886544333333
No 238
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=21.35 E-value=47 Score=30.96 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=27.6
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
..+|.++-.|.+|+ .+|..++.+|++|+++=.
T Consensus 6 ~~~VaViGaG~MG~-----giA~~~a~~G~~V~l~D~ 37 (319)
T 3ado_A 6 AGDVLIVGSGLVGR-----SWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCeEEEECCcHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 45899999999996 688899999999999965
No 239
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=21.32 E-value=70 Score=27.62 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=22.6
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
||+++++-++ |-+- .++|+.|+++|++|.++.-
T Consensus 1 Mk~vlVTGas-~gIG--~~~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 1 MSLIVITGAS-SGLG--AELAKLYDAEGKATYLTGR 33 (230)
T ss_dssp --CEEEESTT-SHHH--HHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEecCC-chHH--HHHHHHHHHCCCEEEEEeC
Confidence 3566777444 4333 5788999999999988754
No 240
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=21.19 E-value=82 Score=26.87 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=24.8
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
++|+++ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 5 ~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 466655 5666665 47889999999999998643
No 241
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=21.16 E-value=48 Score=31.18 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+.+|+++-.|..| +.+|..|+++|++|+++--
T Consensus 5 ~~dVvIIGgGi~G-----l~~A~~La~~G~~V~lle~ 36 (382)
T 1y56_B 5 KSEIVVIGGGIVG-----VTIAHELAKRGEEVTVIEK 36 (382)
T ss_dssp BCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 4589999988777 7889999999999999954
No 242
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=21.15 E-value=1e+02 Score=27.23 Aligned_cols=33 Identities=24% Similarity=0.291 Sum_probs=24.5
Q ss_pred CEEEEEcCCC--CccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPF--QSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~--~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
-|++++|-.+ +| + =.++|+.|+++|++|.++.-
T Consensus 6 gK~alVTGaa~~~G-I--G~aiA~~la~~Ga~Vvi~~r 40 (256)
T 4fs3_A 6 NKTYVIMGIANKRS-I--AFGVAKVLDQLGAKLVFTYR 40 (256)
T ss_dssp TCEEEEECCCSTTC-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCCch-H--HHHHHHHHHHCCCEEEEEEC
Confidence 3788888533 23 2 27899999999999988753
No 243
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=21.13 E-value=44 Score=29.98 Aligned_cols=54 Identities=11% Similarity=0.319 Sum_probs=38.7
Q ss_pred CCCcceeeecCCchhHHHHHhc---CCcEEecCCCCChhhHHHhhcccceeEEEEecCCCCCCHHHHHHHHHHHhcCC
Q 012342 340 HPSIGGFLTHCGWNSIVESLCS---GVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 414 (465)
Q Consensus 340 ~~~~~~~i~hgG~~s~~eal~~---GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~~l~~~ 414 (465)
.+++ +|+=||=||+++++.. ++|+++++.. + +|. + ..+.++++.++++.++++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G--------~----~Gf---l----~~~~~~~~~~al~~i~~g~ 97 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG--------R----LGF---L----TSYTLDEIDRFLEDLRNWN 97 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS--------S----CCS---S----CCBCGGGHHHHHHHHHTTC
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC--------C----CCc---c----CcCCHHHHHHHHHHHHcCC
Confidence 4566 9999999999999876 8898887632 1 111 1 2245778888888887653
No 244
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=21.06 E-value=45 Score=31.49 Aligned_cols=31 Identities=23% Similarity=0.135 Sum_probs=26.7
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 12 ~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
+|.|+-.|..|. .+|..|+++||+|+++...
T Consensus 17 kI~iIG~G~mG~-----~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGT-----ALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHH-----HHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHH-----HHHHHHHhCCCEEEEEECC
Confidence 899999988885 5789999999999998653
No 245
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=20.96 E-value=27 Score=31.96 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~ 47 (465)
+|+|+|+..|+.|- .+|..|++.||+|+++.-.
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 46899999998885 5788999999999999754
No 246
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=20.91 E-value=80 Score=29.24 Aligned_cols=35 Identities=9% Similarity=-0.165 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~~~ 48 (465)
+++|+++ |+.|.+- ..|++.|.++||+|+.++-..
T Consensus 10 ~~~IlVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIA--GATGFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEE--CTTSHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEE--CCCcHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 4566665 5666555 467889999999999987543
No 247
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=20.81 E-value=54 Score=29.87 Aligned_cols=32 Identities=6% Similarity=0.029 Sum_probs=25.7
Q ss_pred hhcCCCcceeeecCCchhHHHHHh----cCCcEEecCC
Q 012342 337 VLKHPSIGGFLTHCGWNSIVESLC----SGVPMICWPF 370 (465)
Q Consensus 337 ~l~~~~~~~~i~hgG~~s~~eal~----~GvP~i~~P~ 370 (465)
+-..+++ +|.=||=||+.+++. .++|+++++.
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3445677 999999999999974 3789999874
No 248
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=20.71 E-value=1.3e+02 Score=27.26 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=24.1
Q ss_pred CEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
.++++++-++ |-+- .++|+.|+++|++|.++.-
T Consensus 31 gk~vlVTGas-~gIG--~~la~~l~~~G~~V~~~~r 63 (301)
T 3tjr_A 31 GRAAVVTGGA-SGIG--LATATEFARRGARLVLSDV 63 (301)
T ss_dssp TCEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEEC
Confidence 4677777444 4443 5789999999999988754
No 249
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=20.67 E-value=62 Score=32.07 Aligned_cols=32 Identities=16% Similarity=0.125 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
.|+|.++-.|..| +.+|..|+++||+|+++-.
T Consensus 8 ~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~ 39 (478)
T 2y0c_A 8 SMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDV 39 (478)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CceEEEECcCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 5899999988888 4679999999999999854
No 250
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=20.63 E-value=1e+02 Score=25.37 Aligned_cols=28 Identities=18% Similarity=0.234 Sum_probs=22.8
Q ss_pred eeEEeeccccCCCHHHHHHHHHHHHhCC
Q 012342 268 VIYVNFGSFIFMNKQQLIEVAMGLVNSN 295 (465)
Q Consensus 268 ~V~vs~GS~~~~~~~~~~~~~~al~~~~ 295 (465)
.+|+++||......+.+...+.+|.+.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999988766777888888888753
No 251
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=20.63 E-value=3.5e+02 Score=22.98 Aligned_cols=37 Identities=11% Similarity=0.025 Sum_probs=34.0
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+..|++++-.+.|-..--+.+|...+.+|++|.|+..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF 64 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQF 64 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 5688999989999999999999999999999999954
No 252
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.57 E-value=44 Score=27.79 Aligned_cols=33 Identities=6% Similarity=-0.086 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhC-CCEEEEEeCC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK-GFHITFVNTE 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~r-Gh~Vt~~t~~ 47 (465)
+.||+++.+|..| ..+++.|.++ ||+|+++...
T Consensus 39 ~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECC
Confidence 5689999766555 4578899999 9999998753
No 253
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=20.49 E-value=1.1e+02 Score=25.26 Aligned_cols=27 Identities=26% Similarity=0.171 Sum_probs=22.4
Q ss_pred eeEEeeccccCCCHHHHHHHHHHHHhC
Q 012342 268 VIYVNFGSFIFMNKQQLIEVAMGLVNS 294 (465)
Q Consensus 268 ~V~vs~GS~~~~~~~~~~~~~~al~~~ 294 (465)
.+|+++||......+.+...+.+|.+.
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~ 32 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEY 32 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 699999998866677788888888874
No 254
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=20.45 E-value=44 Score=29.44 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=24.5
Q ss_pred CCcceeeecCCchhHHHHHhcCCcEEecCCCC
Q 012342 341 PSIGGFLTHCGWNSIVESLCSGVPMICWPFTG 372 (465)
Q Consensus 341 ~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~ 372 (465)
+++ +|+.||-......- .++|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 566 99999999888875 579999999854
No 255
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=20.42 E-value=59 Score=30.80 Aligned_cols=32 Identities=9% Similarity=0.062 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+++|.|+-.|..|- .+|+.|+++||+|+++..
T Consensus 22 ~mkIgiIGlG~mG~-----~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 22 SMQIGMIGLGRMGA-----DMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 57999998877774 678999999999999854
No 256
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=20.39 E-value=1.4e+02 Score=26.10 Aligned_cols=44 Identities=11% Similarity=0.055 Sum_probs=30.4
Q ss_pred hhhhhhcccCCCCceeEEeeccccCCCHHHHHHHHHHHHhCCCCEE
Q 012342 254 TECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFL 299 (465)
Q Consensus 254 ~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~l 299 (465)
+.+.+|+... ..+++|-.|+........+..+.++|++.|..+.
T Consensus 22 ~~l~~~~~~~--~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~ 65 (229)
T 1fy2_A 22 PLIANQLNGR--RSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVT 65 (229)
T ss_dssp HHHHHHHTTC--CEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHHHhcCC--CeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEE
Confidence 3466777533 3599999887543344567778999999887654
No 257
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=20.31 E-value=1.1e+02 Score=23.25 Aligned_cols=46 Identities=17% Similarity=0.087 Sum_probs=28.6
Q ss_pred CCCCCCCC-----CCCEEEEEcCCCCccHHHHH-HHHHHHHhCCCE-EEEEeC
Q 012342 1 MESKPKAC-----SKVHAVCIPSPFQSHIKAML-KLAKLLHHKGFH-ITFVNT 46 (465)
Q Consensus 1 m~~~~~~~-----~~~~il~~~~~~~GH~~P~l-~La~~L~~rGh~-Vt~~t~ 46 (465)
|+||.+++ .+.+|++++..+.|.-.=.- .|-+.+.+.|.+ +.+-+.
T Consensus 4 ~~~~~~~~~~~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~ 56 (110)
T 3czc_A 4 MASMTGGQQMGRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASC 56 (110)
T ss_dssp --------------CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred hhhccccccccccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 45555442 23689999999999887666 677788889988 665443
No 258
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=20.12 E-value=90 Score=27.01 Aligned_cols=39 Identities=13% Similarity=0.042 Sum_probs=31.6
Q ss_pred CCEEEEEcC--CCCccHHHHHHHHHHHHhC-CCEEEEEeCCc
Q 012342 10 KVHAVCIPS--PFQSHIKAMLKLAKLLHHK-GFHITFVNTEF 48 (465)
Q Consensus 10 ~~~il~~~~--~~~GH~~P~l~La~~L~~r-Gh~Vt~~t~~~ 48 (465)
+++|+.+.. |+.|--.-...||..|+++ |++|.++-...
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 456555543 7999999999999999999 99999996543
No 259
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=20.06 E-value=1.1e+02 Score=25.06 Aligned_cols=28 Identities=21% Similarity=0.211 Sum_probs=22.0
Q ss_pred eeEEeeccccCCCHHHHHHHHHHHHhCC
Q 012342 268 VIYVNFGSFIFMNKQQLIEVAMGLVNSN 295 (465)
Q Consensus 268 ~V~vs~GS~~~~~~~~~~~~~~al~~~~ 295 (465)
+.|+++||......+.+...+.+|.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 5799999987666677888888887753
No 260
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=20.03 E-value=95 Score=28.14 Aligned_cols=34 Identities=12% Similarity=0.035 Sum_probs=23.7
Q ss_pred CCEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012342 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~La~~L~~rGh~Vt~~t~ 46 (465)
+.+.++++ |+.|-+- ..|++.|+++||+|+.+.-
T Consensus 11 ~~~~vlVT-GatG~iG--~~l~~~L~~~G~~V~~~~r 44 (321)
T 2pk3_A 11 GSMRALIT-GVAGFVG--KYLANHLTEQNVEVFGTSR 44 (321)
T ss_dssp --CEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CcceEEEE-CCCChHH--HHHHHHHHHCCCEEEEEec
Confidence 34445555 6677665 4678999999999998764
Done!