Query 012345
Match_columns 465
No_of_seqs 190 out of 797
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 07:37:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012345.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012345hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 76.9 2.3 8E-05 37.7 4.5 52 295-372 73-124 (200)
2 4hf7_A Putative acylhydrolase; 65.9 2.2 7.6E-05 38.5 1.7 18 192-210 25-42 (209)
3 3hp4_A GDSL-esterase; psychrot 65.4 2.1 7.1E-05 37.2 1.4 15 192-206 1-15 (185)
4 3rjt_A Lipolytic protein G-D-S 56.1 4.1 0.00014 35.7 1.6 15 192-206 7-21 (216)
5 1ivn_A Thioesterase I; hydrola 49.1 5.1 0.00018 35.0 1.0 14 193-206 1-14 (190)
6 3mil_A Isoamyl acetate-hydroly 49.0 5 0.00017 36.0 1.0 15 191-205 1-15 (240)
7 1fxw_F Alpha2, platelet-activa 48.0 7.7 0.00026 35.2 2.1 23 185-207 29-53 (229)
8 1yzf_A Lipase/acylhydrolase; s 46.2 6.1 0.00021 34.0 1.0 13 194-206 2-14 (195)
9 1es9_A PAF-AH, platelet-activa 44.2 9 0.00031 34.7 1.9 30 338-370 112-141 (232)
10 2q0q_A ARYL esterase; SGNH hyd 42.5 7.1 0.00024 34.5 0.9 13 194-206 3-15 (216)
11 2hsj_A Putative platelet activ 41.7 9.8 0.00034 33.6 1.7 32 338-372 106-137 (214)
12 3dci_A Arylesterase; SGNH_hydr 38.7 8.7 0.0003 34.9 0.9 33 338-370 124-158 (232)
13 1vjg_A Putative lipase from th 38.0 8 0.00027 34.5 0.5 15 192-206 19-33 (218)
14 3dc7_A Putative uncharacterize 37.3 11 0.00038 33.9 1.4 17 190-206 18-34 (232)
15 3p94_A GDSL-like lipase; serin 35.8 13 0.00043 32.4 1.4 29 338-371 98-126 (204)
16 1fll_X B-cell surface antigen 35.0 16 0.00055 23.1 1.4 11 441-451 5-15 (26)
17 3bzw_A Putative lipase; protei 32.6 15 0.00051 34.4 1.5 16 191-206 24-39 (274)
18 2vpt_A Lipolytic enzyme; ester 30.6 16 0.00055 32.6 1.2 26 342-370 106-131 (215)
19 2w9x_A AXE2A, CJCE2B, putative 27.0 22 0.00076 35.2 1.6 72 337-434 267-340 (366)
20 2waa_A Acetyl esterase, xylan 26.1 19 0.00067 35.4 1.0 15 192-206 131-145 (347)
21 2wao_A Endoglucanase E; plant 25.0 21 0.00072 34.8 1.0 15 192-206 121-135 (341)
22 3tpf_A Otcase, ornithine carba 23.9 37 0.0013 33.6 2.6 25 191-217 143-168 (307)
23 3t6g_B Breast cancer anti-estr 23.1 4.8 0.00016 38.4 -3.8 38 154-206 122-159 (229)
24 3grf_A Ornithine carbamoyltran 22.2 42 0.0014 33.5 2.6 27 190-217 158-184 (328)
25 3r7f_A Aspartate carbamoyltran 21.9 40 0.0014 33.4 2.3 27 191-217 145-171 (304)
26 3csu_A Protein (aspartate carb 20.3 46 0.0016 33.0 2.4 27 191-217 152-178 (310)
27 4amu_A Ornithine carbamoyltran 20.3 48 0.0016 33.7 2.6 26 191-217 178-203 (365)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=76.95 E-value=2.3 Score=37.68 Aligned_cols=52 Identities=19% Similarity=0.365 Sum_probs=33.3
Q ss_pred CcccEEEEcCcccccCCcccCCeeEEEeCCccCCCcchhhhhhHHHHHHHHHHHHHHhhCCCCCCceEEEEeccCCcc
Q 012345 295 HKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHF 372 (465)
Q Consensus 295 ~~~DvLVfNtGhWW~r~~~~~~~~~~~~gg~~~~~~~~~~~~~a~~~al~T~~~wV~~~l~~~~~t~VffRT~SP~Hf 372 (465)
..+|+|||+.|..= + . . -...|+..|+.+.+.+.+.. ++++++|-+..|...
T Consensus 73 ~~pd~Vvi~~G~ND---------~-----~-----~----~~~~~~~~l~~ii~~l~~~~---p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 73 TKFDVIHFNNGLHG---------F-----D-----Y----TEEEYDKSFPKLIKIIRKYA---PKAKLIWANTTPVRT 124 (200)
T ss_dssp SCCSEEEECCCSSC---------T-----T-----S----CHHHHHHHHHHHHHHHHHHC---TTCEEEEECCCCCEE
T ss_pred CCCCeEEEEeeeCC---------C-----C-----C----CHHHHHHHHHHHHHHHhhhC---CCccEEEeccCCCcc
Confidence 46799999998520 0 0 0 02346666777777776543 356889999888654
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=65.91 E-value=2.2 Score=38.49 Aligned_cols=18 Identities=11% Similarity=0.565 Sum_probs=14.4
Q ss_pred cCCcEEEEecchhHHHHHH
Q 012345 192 QDRTLAFIGDSLGRQQFQS 210 (465)
Q Consensus 192 RgKrl~FVGDSL~RNq~eS 210 (465)
.+++|+|+||||+.. |..
T Consensus 25 ~~~~Iv~~GDSit~g-w~~ 42 (209)
T 4hf7_A 25 KEKRVVFMGNXITEG-WVR 42 (209)
T ss_dssp GGCCEEEEESHHHHH-HHH
T ss_pred CCCeEEEECcHHHhC-hhH
Confidence 467899999999975 543
No 3
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=65.42 E-value=2.1 Score=37.16 Aligned_cols=15 Identities=33% Similarity=0.609 Sum_probs=12.6
Q ss_pred cCCcEEEEecchhHH
Q 012345 192 QDRTLAFIGDSLGRQ 206 (465)
Q Consensus 192 RgKrl~FVGDSL~RN 206 (465)
.|++|+|+|||++..
T Consensus 1 ~~~~i~~~GDSit~G 15 (185)
T 3hp4_A 1 MDNTILILGDXLSAA 15 (185)
T ss_dssp -CEEEEEEECTTTTT
T ss_pred CCCeEEEECCccccc
Confidence 378999999999974
No 4
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=56.06 E-value=4.1 Score=35.73 Aligned_cols=15 Identities=27% Similarity=0.470 Sum_probs=13.1
Q ss_pred cCCcEEEEecchhHH
Q 012345 192 QDRTLAFIGDSLGRQ 206 (465)
Q Consensus 192 RgKrl~FVGDSL~RN 206 (465)
.+++|+|+|||++..
T Consensus 7 ~~~~i~~~GDSit~g 21 (216)
T 3rjt_A 7 PGSKLVMVGDSITDC 21 (216)
T ss_dssp TTCEEEEEESHHHHT
T ss_pred CCCEEEEEecccccc
Confidence 478999999999965
No 5
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=49.08 E-value=5.1 Score=34.99 Aligned_cols=14 Identities=43% Similarity=0.591 Sum_probs=12.1
Q ss_pred CCcEEEEecchhHH
Q 012345 193 DRTLAFIGDSLGRQ 206 (465)
Q Consensus 193 gKrl~FVGDSL~RN 206 (465)
.|+|+|+|||++..
T Consensus 1 ~~~i~~~GDSit~g 14 (190)
T 1ivn_A 1 ADTLLILGDSLSAG 14 (190)
T ss_dssp CEEEEEEECHHHHC
T ss_pred CCcEEEEecCcccC
Confidence 37899999999875
No 6
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=49.04 E-value=5 Score=35.96 Aligned_cols=15 Identities=27% Similarity=0.496 Sum_probs=12.7
Q ss_pred HcCCcEEEEecchhH
Q 012345 191 MQDRTLAFIGDSLGR 205 (465)
Q Consensus 191 lRgKrl~FVGDSL~R 205 (465)
|..++|+|+|||++.
T Consensus 1 ~~~~~i~~~GDSit~ 15 (240)
T 3mil_A 1 MDYEKFLLFGDSITE 15 (240)
T ss_dssp CCCEEEEEEESHHHH
T ss_pred CCcccEEEEccchhh
Confidence 345799999999987
No 7
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=47.99 E-value=7.7 Score=35.24 Aligned_cols=23 Identities=22% Similarity=0.502 Sum_probs=17.2
Q ss_pred HHHHHHH--cCCcEEEEecchhHHH
Q 012345 185 SQFLTRM--QDRTLAFIGDSLGRQQ 207 (465)
Q Consensus 185 ~~FLe~l--RgKrl~FVGDSL~RNq 207 (465)
..|++.. ...+|+|+|||++...
T Consensus 29 ~~~~~~~~~~~~~i~~~GDSit~g~ 53 (229)
T 1fxw_F 29 NRFVLDCKDKEPDVLFVGDSMVQLM 53 (229)
T ss_dssp HHHHHHHHHCCCSEEEEESHHHHGG
T ss_pred HHHHHHcccCCCCEEEEecchhcCC
Confidence 4566654 4569999999999763
No 8
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=46.22 E-value=6.1 Score=33.98 Aligned_cols=13 Identities=31% Similarity=0.623 Sum_probs=11.7
Q ss_pred CcEEEEecchhHH
Q 012345 194 RTLAFIGDSLGRQ 206 (465)
Q Consensus 194 Krl~FVGDSL~RN 206 (465)
++|+|+|||++..
T Consensus 2 ~~i~~~GDS~t~g 14 (195)
T 1yzf_A 2 RKIVLFGDSITAG 14 (195)
T ss_dssp EEEEEEESHHHHC
T ss_pred CeEEEEccccccC
Confidence 5899999999987
No 9
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=44.19 E-value=9 Score=34.69 Aligned_cols=30 Identities=27% Similarity=0.369 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEeccCC
Q 012345 338 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPR 370 (465)
Q Consensus 338 a~~~al~T~~~wV~~~l~~~~~t~VffRT~SP~ 370 (465)
.|...++.+++.+.+.. ++++|++-+..|.
T Consensus 112 ~~~~~l~~~i~~l~~~~---p~~~ii~~~~~p~ 141 (232)
T 1es9_A 112 QVTGGIKAIVQLVNERQ---PQARVVVLGLLPR 141 (232)
T ss_dssp HHHHHHHHHHHHHHHHS---TTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHC---CCCeEEEecCCCC
Confidence 34555677777776553 3578999988774
No 10
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=42.50 E-value=7.1 Score=34.50 Aligned_cols=13 Identities=31% Similarity=0.465 Sum_probs=11.2
Q ss_pred CcEEEEecchhHH
Q 012345 194 RTLAFIGDSLGRQ 206 (465)
Q Consensus 194 Krl~FVGDSL~RN 206 (465)
|+|+|+|||++..
T Consensus 3 ~~i~~~GDSit~G 15 (216)
T 2q0q_A 3 KRILCFGDSLTWG 15 (216)
T ss_dssp EEEEEEESHHHHT
T ss_pred ceEEEEecCcccC
Confidence 5899999999953
No 11
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=41.71 E-value=9.8 Score=33.58 Aligned_cols=32 Identities=19% Similarity=0.128 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEeccCCcc
Q 012345 338 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHF 372 (465)
Q Consensus 338 a~~~al~T~~~wV~~~l~~~~~t~VffRT~SP~Hf 372 (465)
.|...++.+++.+.+.. +.++|++-+..|...
T Consensus 106 ~~~~~l~~~i~~l~~~~---p~~~iil~~~~p~~~ 137 (214)
T 2hsj_A 106 EALNNLEAIIQSVARDY---PLTEIKLLSILPVNE 137 (214)
T ss_dssp HHHHHHHHHHHHHHHHC---TTCEEEEECCCCCCC
T ss_pred HHHHHHHHHHHHHHHhC---CCCeEEEEecCCCCc
Confidence 35556777777776543 346789998877553
No 12
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=38.70 E-value=8.7 Score=34.92 Aligned_cols=33 Identities=12% Similarity=0.057 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHhhCC--CCCCceEEEEeccCC
Q 012345 338 AKNFTIHSIVSWVNSQLP--EHPRLKAFYRSISPR 370 (465)
Q Consensus 338 a~~~al~T~~~wV~~~l~--~~~~t~VffRT~SP~ 370 (465)
.|...|+.+++.+.+... ..++++|++-+..|.
T Consensus 124 ~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~ 158 (232)
T 3dci_A 124 AAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPC 158 (232)
T ss_dssp HHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCc
Confidence 456667777777765321 003567888875443
No 13
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=38.03 E-value=8 Score=34.53 Aligned_cols=15 Identities=27% Similarity=0.516 Sum_probs=13.0
Q ss_pred cCCcEEEEecchhHH
Q 012345 192 QDRTLAFIGDSLGRQ 206 (465)
Q Consensus 192 RgKrl~FVGDSL~RN 206 (465)
..++|+|+|||++..
T Consensus 19 ~~~~i~~lGDSit~g 33 (218)
T 1vjg_A 19 TQIRICFVGDSFVNG 33 (218)
T ss_dssp EEEEEEEEESHHHHT
T ss_pred CCceEEEEccccccC
Confidence 456999999999986
No 14
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=37.29 E-value=11 Score=33.90 Aligned_cols=17 Identities=24% Similarity=0.436 Sum_probs=14.0
Q ss_pred HHcCCcEEEEecchhHH
Q 012345 190 RMQDRTLAFIGDSLGRQ 206 (465)
Q Consensus 190 ~lRgKrl~FVGDSL~RN 206 (465)
.+..++|+|+|||++..
T Consensus 18 ~~~~~~i~~lGDSit~G 34 (232)
T 3dc7_A 18 HVSFKRPAWLGDSITAN 34 (232)
T ss_dssp CBCCSSEEEEESTTTST
T ss_pred CCCcceEEEEccccccc
Confidence 34567999999999875
No 15
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=35.83 E-value=13 Score=32.43 Aligned_cols=29 Identities=14% Similarity=0.174 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEeccCCc
Q 012345 338 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRH 371 (465)
Q Consensus 338 a~~~al~T~~~wV~~~l~~~~~t~VffRT~SP~H 371 (465)
.|...++.+++.+.+ ++++|++-+..|..
T Consensus 98 ~~~~~~~~~i~~~~~-----~~~~vil~~~~p~~ 126 (204)
T 3p94_A 98 NVFGNLVSMAELAKA-----NHIKVIFCSVLPAY 126 (204)
T ss_dssp HHHHHHHHHHHHHHH-----TTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHHHh-----CCCeEEEEeCCCCC
Confidence 355556666666643 25678888887754
No 16
>1fll_X B-cell surface antigen CD40; TRAF3 with CD40 peptide, TNF signaling, apoptosis; 3.50A {Homo sapiens}
Probab=35.03 E-value=16 Score=23.10 Aligned_cols=11 Identities=45% Similarity=0.570 Sum_probs=9.5
Q ss_pred CCCCcccccCC
Q 012345 441 GVQDCLHWCLP 451 (465)
Q Consensus 441 ~~~DClHWCLP 451 (465)
.++|-+|||+|
T Consensus 5 pvqeTl~~~qP 15 (26)
T 1fll_X 5 PVQETLHGSQP 15 (26)
T ss_dssp CCCCCCCCSSS
T ss_pred ChhHHhhcCcc
Confidence 35899999998
No 17
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=32.64 E-value=15 Score=34.36 Aligned_cols=16 Identities=31% Similarity=0.640 Sum_probs=13.4
Q ss_pred HcCCcEEEEecchhHH
Q 012345 191 MQDRTLAFIGDSLGRQ 206 (465)
Q Consensus 191 lRgKrl~FVGDSL~RN 206 (465)
..+++|+|+|||++..
T Consensus 24 ~~~~~iv~lGDSiT~G 39 (274)
T 3bzw_A 24 WQGKKVGYIGDSITDP 39 (274)
T ss_dssp TTTCEEEEEESTTTCT
T ss_pred CCCCEEEEEecCcccC
Confidence 4578999999999864
No 18
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=30.58 E-value=16 Score=32.60 Aligned_cols=26 Identities=12% Similarity=0.281 Sum_probs=16.6
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEEeccCC
Q 012345 342 TIHSIVSWVNSQLPEHPRLKAFYRSISPR 370 (465)
Q Consensus 342 al~T~~~wV~~~l~~~~~t~VffRT~SP~ 370 (465)
.++.+++.+.+.. ++++|++-++.|.
T Consensus 106 ~l~~li~~i~~~~---p~~~ii~~~~~p~ 131 (215)
T 2vpt_A 106 GLSNLIDQIFTVK---PNVTLFVADYYPW 131 (215)
T ss_dssp HHHHHHHHHHHHC---TTCEEEEECCCSC
T ss_pred HHHHHHHHHHHhC---CCCEEEEEeCCCC
Confidence 3556666665542 4577888887764
No 19
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=26.95 E-value=22 Score=35.23 Aligned_cols=72 Identities=13% Similarity=-0.029 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCCceEEEEeccCCccCCCCCCCCCCCCccccCCCCcccccCCcchhhhhhh--ccCCce
Q 012345 337 GAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSA--VKGTGV 414 (465)
Q Consensus 337 ~a~~~al~T~~~wV~~~l~~~~~t~VffRT~SP~Hfegg~Wn~GG~C~~T~P~~~~e~~~~~~~~~~~~~~~--~~~~~v 414 (465)
..|...++.+++-+.+.- ++++|++-+. |..+ +.| . .....++... .....+
T Consensus 267 ~~~~~~l~~li~~ir~~~---p~a~Iil~~p-p~~~--~~~------------~--------~~i~~~~~~~~~~~~~~v 320 (366)
T 2w9x_A 267 ADYVANYVKFVKQLHSNN---ARAQFILMNS-DQSN--GEI------------A--------EQVGKVVAQLKGGGLHQV 320 (366)
T ss_dssp HHHHHHHHHHHHHHHHHC---TTCEEEEEEE-SCGG--GHH------------H--------HHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHHHHHHHC---CCCeEEEEeC-CCcC--chH------------H--------HHHHHHHHHHHhcCCCcE
Confidence 456677788888776653 3567777763 3221 111 0 0011111111 124678
Q ss_pred EEeecccccccccCCCCccc
Q 012345 415 KLLDITALSQVRDEGHISQY 434 (465)
Q Consensus 415 ~lLDIT~lS~lR~DgHPs~Y 434 (465)
.++|+.....+-.|-||+.-
T Consensus 321 ~~vd~~~~~~~~dd~HPn~~ 340 (366)
T 2w9x_A 321 EQIVFKGLDYSGCHWHPSAN 340 (366)
T ss_dssp EEEEECCCCCCBGGGBCCHH
T ss_pred EEEEccCCCCCCCCCCcCHH
Confidence 89998655555566788754
No 20
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=26.11 E-value=19 Score=35.36 Aligned_cols=15 Identities=27% Similarity=0.468 Sum_probs=12.7
Q ss_pred cCCcEEEEecchhHH
Q 012345 192 QDRTLAFIGDSLGRQ 206 (465)
Q Consensus 192 RgKrl~FVGDSL~RN 206 (465)
..++|+|+||||+..
T Consensus 131 ~~~~I~~iGDSIT~G 145 (347)
T 2waa_A 131 PQRKILVLGDSVTCG 145 (347)
T ss_dssp CSEEEEEEESTTTTT
T ss_pred CCceEEEeecccccc
Confidence 467999999999865
No 21
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=25.05 E-value=21 Score=34.84 Aligned_cols=15 Identities=40% Similarity=0.722 Sum_probs=12.5
Q ss_pred cCCcEEEEecchhHH
Q 012345 192 QDRTLAFIGDSLGRQ 206 (465)
Q Consensus 192 RgKrl~FVGDSL~RN 206 (465)
..++|+|+||||+-.
T Consensus 121 ~~~~I~~iGDSiT~G 135 (341)
T 2wao_A 121 LERKIEFIGDSITCA 135 (341)
T ss_dssp CSEEEEEEESHHHHT
T ss_pred CCceEEEEccccccC
Confidence 357999999999875
No 22
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=23.85 E-value=37 Score=33.59 Aligned_cols=25 Identities=24% Similarity=0.248 Sum_probs=20.6
Q ss_pred Hc-CCcEEEEecchhHHHHHHHHHHhhC
Q 012345 191 MQ-DRTLAFIGDSLGRQQFQSLMCMVTG 217 (465)
Q Consensus 191 lR-gKrl~FVGDSL~RNq~eSLlCLL~~ 217 (465)
+. |++|+|||| . -|.-.||+.+|..
T Consensus 143 l~~gl~va~vGD-~-~~va~Sl~~~~~~ 168 (307)
T 3tpf_A 143 QNGIAKVAFIGD-S-NNMCNSWLITAAI 168 (307)
T ss_dssp GGGCCEEEEESC-S-SHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcC-C-CccHHHHHHHHHH
Confidence 56 999999999 3 5688899988864
No 23
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=23.13 E-value=4.8 Score=38.38 Aligned_cols=38 Identities=21% Similarity=0.379 Sum_probs=26.4
Q ss_pred cccccccCCCCcccceeeecCCCCCCCCCCHHHHHHHHcCCcEEEEecchhHH
Q 012345 154 MWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRMQDRTLAFIGDSLGRQ 206 (465)
Q Consensus 154 ~~nC~~nGRPD~~Yl~WRWqP~~C~LprFd~~~FLe~lRgKrl~FVGDSL~RN 206 (465)
-+.|..++-|-.-|. +..=+-.|-+.+++||||.|+|+
T Consensus 122 F~~sv~~nQPP~iFV---------------ahsK~VIlsAHKLVfIGDTL~r~ 159 (229)
T 3t6g_B 122 FFTAVATNQPPKIFV---------------AHSKFVILSAHKLVFIGDTLSRQ 159 (229)
T ss_dssp HHHHHHTTCCHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhcCCCchhhH---------------hcCCEEEEEeeeeeeecchHHHh
Confidence 366777776644333 23344568888999999999985
No 24
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=22.18 E-value=42 Score=33.52 Aligned_cols=27 Identities=22% Similarity=0.244 Sum_probs=22.6
Q ss_pred HHcCCcEEEEecchhHHHHHHHHHHhhC
Q 012345 190 RMQDRTLAFIGDSLGRQQFQSLMCMVTG 217 (465)
Q Consensus 190 ~lRgKrl~FVGDSL~RNq~eSLlCLL~~ 217 (465)
.+.|++|+||||-.+ |.-.||+.+|..
T Consensus 158 ~l~gl~va~vGD~~~-~va~Sl~~~~~~ 184 (328)
T 3grf_A 158 GFKGIKFAYCGDSMN-NVTYDLMRGCAL 184 (328)
T ss_dssp TGGGCCEEEESCCSS-HHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCc-chHHHHHHHHHH
Confidence 478999999999766 688999988854
No 25
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=21.90 E-value=40 Score=33.38 Aligned_cols=27 Identities=19% Similarity=0.133 Sum_probs=22.6
Q ss_pred HcCCcEEEEecchhHHHHHHHHHHhhC
Q 012345 191 MQDRTLAFIGDSLGRQQFQSLMCMVTG 217 (465)
Q Consensus 191 lRgKrl~FVGDSL~RNq~eSLlCLL~~ 217 (465)
+.|++|+||||-..-|.-.||+.+|..
T Consensus 145 l~glkva~vGD~~~~rva~Sl~~~~~~ 171 (304)
T 3r7f_A 145 FKGLTVSIHGDIKHSRVARSNAEVLTR 171 (304)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 678999999997666788999988764
No 26
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=20.32 E-value=46 Score=32.95 Aligned_cols=27 Identities=19% Similarity=0.261 Sum_probs=22.7
Q ss_pred HcCCcEEEEecchhHHHHHHHHHHhhC
Q 012345 191 MQDRTLAFIGDSLGRQQFQSLMCMVTG 217 (465)
Q Consensus 191 lRgKrl~FVGDSL~RNq~eSLlCLL~~ 217 (465)
+.|++|+||||-..-|...||+-+|..
T Consensus 152 l~gl~va~vGD~~~~rva~Sl~~~~~~ 178 (310)
T 3csu_A 152 LDNLHVAMVGDLKYGRTVHSLTQALAK 178 (310)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHHHHHT
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 688999999996655789999998864
No 27
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=20.29 E-value=48 Score=33.67 Aligned_cols=26 Identities=23% Similarity=0.252 Sum_probs=21.7
Q ss_pred HcCCcEEEEecchhHHHHHHHHHHhhC
Q 012345 191 MQDRTLAFIGDSLGRQQFQSLMCMVTG 217 (465)
Q Consensus 191 lRgKrl~FVGDSL~RNq~eSLlCLL~~ 217 (465)
++|++|+||||-.+ |.-.||+.+|..
T Consensus 178 l~glkva~vGD~~n-nva~Sl~~~~~~ 203 (365)
T 4amu_A 178 LKNKKIVFIGDYKN-NVGVSTMIGAAF 203 (365)
T ss_dssp CTTCEEEEESSTTS-HHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCc-chHHHHHHHHHH
Confidence 68999999999766 588899988754
Done!