STRING 9.05 
  AT4G10790 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT4G10790
UBX domain-containing protein; UBX domain-containing protein; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- UAS (InterPro-IPR006577), UBX (InterPro-IPR001012); BEST Arabidopsis thaliana protein match is- SAY1 (TAIR-AT4G11740.1); Has 16384 Blast hits to 7928 proteins in 781 species- Archae - 7; Bacteria - 2234; Metazoa - 5947; Fungi - 1696; Plants - 733; Viruses - 184; Other Eukaryotes - 5583 (source- NCBI BLink). (480 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT2G04870
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (72 aa)
       0.966
AT1G26330
DNA binding; DNA binding; FUNCTIONS IN- DNA binding; INVOLVED IN- biological_process unknown; L [...] (1189 aa)
       0.966
AT1G25570
leucine-rich repeat protein-related; leucine-rich repeat protein-related; FUNCTIONS IN- protein [...] (628 aa)
       0.966
AtGRF6
AtGRF6 (GROWTH-REGULATING FACTOR 6); transcription activator; Growth regulating factor encoding [...] (244 aa)
       0.927
AT1G42980
formin homology 2 domain-containing protein / FH2 domain-containing protein; formin homology 2 [...] (299 aa)
       0.921
AT5G56000
heat shock protein 81-4 (HSP81-4); heat shock protein 81-4 (HSP81-4); FUNCTIONS IN- unfolded pr [...] (699 aa)
       0.408
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: medium (41%)
Permalink