Your job contains 1 sequence.
>012348
MKHKTHPCNPVALSFISVSVFIFNLDLTCLSCNYCYLVLQILNIRCFVFCAAILTLILCV
YRSIYEEGRFCDTFHVNASGWRCCESCGKRVHCGCITSVHAFTLLDAGGIECMTCARKNV
LVAPTPSWPPSLFYQTPFPERIKDLSVKNWTQLAGSGPVPWRQAPSLFNSSIPQPELRPR
LPYEVDLSAGIDRINASERLSVPSLEKRKLEDFSERLMNGGLKSGSRDIPENANAGSNCD
MQPSSCLNKPQQSSTLKDDSSTPHFGLAVSYASPSETNSQIGVSGSHLRPVVQPPLVKQF
HGNLPNGADSLGETQVRNGRPRVDARGRSQLLPRYWPRFTDQDLQQISGDSNSVITPLFE
KMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDSKGKEWIFQFRFWPNNNSRM
YVLEGVTPCIQNMQLQAGDIGNQPKSQESYEMFSFMWKVHVHALN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012348
(465 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 552 1.0e-70 2
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 545 2.1e-70 2
TAIR|locus:2088439 - symbol:FUS3 "FUSCA 3" species:3702 "... 210 1.4e-15 2
UNIPROTKB|Q7XKC5 - symbol:LOC_Os04g58000 "B3 domain-conta... 218 4.1e-15 1
UNIPROTKB|Q6Z1Z3 - symbol:IDEF1 "B3 domain-containing pro... 203 1.1e-13 1
TAIR|locus:2093166 - symbol:ABI3 "AT3G24650" species:3702... 199 4.8e-13 2
TAIR|locus:2032170 - symbol:LEC2 "LEAFY COTYLEDON 2" spec... 190 3.5e-12 1
UNIPROTKB|A4LBC0 - symbol:LFL1 "B3 domain-containing prot... 188 8.2e-12 1
UNIPROTKB|P37398 - symbol:VP1 "B3 domain-containing prote... 191 5.3e-11 2
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 169 9.0e-11 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 170 5.1e-10 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 170 6.1e-10 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 169 7.3e-10 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 167 8.8e-10 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 164 3.0e-09 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 163 3.2e-09 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 158 6.7e-09 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 156 1.4e-08 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 155 3.2e-08 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 150 4.6e-08 1
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 552 (199.4 bits), Expect = 1.0e-70, Sum P(2) = 1.0e-70
Identities = 137/284 (48%), Positives = 170/284 (59%)
Query: 165 PSLFNSSIPQPELRPRLPYEVDLSAGIDRINASERLSVPS-LEKRKLEDFSERLMNGGLK 223
P +F S +P L R V+ +G R N + S P + K E+F G L
Sbjct: 111 PGVF-SRLPMKTLADR--QHVNGESG-GR-NEGDLFSQPLVMGGDKREEFMPHRGFGKLM 165
Query: 224 SGSRDIPENANAGSNCD----MQPSSCLNKPQQSSTLKDDSSTPHFGL-AVS---YASPS 275
S PE+ G D M SS L +P + L + +P F AV + SPS
Sbjct: 166 S-----PESTTTGHRLDAAGEMHESSPL-QPSLNMGLAVNPFSPSFATEAVEGMKHISPS 219
Query: 276 ETNSQIGVSGSHLRPVVQPPLVKQFHGNLPNGADSLGETQVRNGRPRVDARGRSQLLPRY 335
++N + S S++ P + + P A Q R GRP V+ RGR LLPRY
Sbjct: 220 QSN-MVHCSASNILQKPSRPAI-----STPPVASK--SAQARIGRPPVEGRGRGHLLPRY 271
Query: 336 WPRFTDQDLQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLP 395
WP++TD+++QQISG+ N I PLFEK LSASDAGRIGRLVLPK CAEAYFPPISQ EG+P
Sbjct: 272 WPKYTDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIP 331
Query: 396 LKVQDSKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGD 439
LK+QD +G+EW FQFR+WPNNNSRMYVLEGVTPCIQ+M LQAGD
Sbjct: 332 LKIQDVRGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGD 375
Score = 184 (69.8 bits), Expect = 1.0e-70, Sum P(2) = 1.0e-70
Identities = 38/82 (46%), Positives = 46/82 (56%)
Query: 58 LCVYR--SIYEEGRFCDTFHVNASGWRCCESCGKRVHCGCITSVHAFTLLDAGGIECMTC 115
LC YR S YE FC+ FH + SGWR C C KR+HCGCI S L+D GG+ C TC
Sbjct: 38 LC-YRCGSAYESSLFCEQFHKDQSGWRECYLCSKRLHCGCIASKVTIELMDYGGVGCSTC 96
Query: 116 ARKNVLVAPTPSWPPSLFYQTP 137
A + L T P +F + P
Sbjct: 97 ACCHQLNLNTRGENPGVFSRLP 118
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 545 (196.9 bits), Expect = 2.1e-70, Sum P(2) = 2.1e-70
Identities = 114/173 (65%), Positives = 130/173 (75%)
Query: 275 SETNS--QIGVSGSHL--RPVVQPPLVKQFHGNLPNGADSLGETQVRNGRPRVDARGRSQ 330
S+TNS Q+ L +P P+ G P+G SL +Q+ RP + RG++Q
Sbjct: 200 SKTNSIFQLAPRSRQLLPKPANSAPIAA---GMEPSG--SL-VSQIHVARPPPEGRGKTQ 253
Query: 331 LLPRYWPRFTDQDLQQISGD----SNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFP 386
LLPRYWPR TDQ+L Q+SG SNS I PLFEK+LSASDAGRIGRLVLPK CAEAYFP
Sbjct: 254 LLPRYWPRITDQELLQLSGQYPHLSNSKIIPLFEKVLSASDAGRIGRLVLPKACAEAYFP 313
Query: 387 PISQPEGLPLKVQDSKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGD 439
PIS PEGLPLK+QD KGKEW+FQFRFWPNNNSRMYVLEGVTPCIQ+MQLQAGD
Sbjct: 314 PISLPEGLPLKIQDIKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGD 366
Score = 188 (71.2 bits), Expect = 2.1e-70, Sum P(2) = 2.1e-70
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 65 YEEGRFCDTFHVNASGWRCCESCGKRVHCGCITSVHAFTLLDAGGIECMTCARKNVLVA 123
YE+ FC+ FH SGWR C SC KR+HCGCI S LL+ GG+ C++CA+K+ L++
Sbjct: 43 YEQSIFCEVFHAKESGWRECNSCDKRLHCGCIASRFMMELLENGGVTCISCAKKSGLIS 101
>TAIR|locus:2088439 [details] [associations]
symbol:FUS3 "FUSCA 3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IGI;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IDA] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0010116 "positive regulation of abscisic acid
biosynthetic process" evidence=IMP] [GO:0010373 "negative
regulation of gibberellin biosynthetic process" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0003677 GO:GO:0008284 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AB016889 GO:GO:0010262 GO:GO:0010116 EMBL:AF016264
EMBL:AF016265 EMBL:AJ630497 EMBL:AY568669 IPI:IPI00540441
RefSeq:NP_566799.1 UniGene:At.6029 UniGene:At.66989 HSSP:Q9ZWM9
ProteinModelPortal:Q9LW31 SMR:Q9LW31 STRING:Q9LW31
EnsemblPlants:AT3G26790.1 GeneID:822293 KEGG:ath:AT3G26790
TAIR:At3g26790 eggNOG:NOG309510 HOGENOM:HOG000112670
InParanoid:O82411 OMA:GDFVNAH PhylomeDB:Q9LW31
ProtClustDB:CLSN2713723 Genevestigator:Q9LW31 GO:GO:0010373
Uniprot:Q9LW31
Length = 313
Score = 210 (79.0 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 39/83 (46%), Positives = 54/83 (65%)
Query: 358 LFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDSKGKE-WIFQFRFWPNN 416
LF+K L SD + R++LPKK AEA+ P + EG+P++++D G W F++R+WPNN
Sbjct: 91 LFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTFKYRYWPNN 150
Query: 417 NSRMYVLEGVTPCIQNMQLQAGD 439
NSRMYVLE + LQ GD
Sbjct: 151 NSRMYVLENTGDFVNAHGLQLGD 173
Score = 40 (19.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 119 NVLVAPTPSWPPSLFYQTPFPER 141
N+L P P PP TP P R
Sbjct: 60 NLLSFPPPM-PPISHVPTPLPAR 81
>UNIPROTKB|Q7XKC5 [details] [associations]
symbol:LOC_Os04g58000 "B3 domain-containing protein
Os04g0676600" species:39947 "Oryza sativa Japonica Group"
[GO:0003677 "DNA binding" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AP008210 EMBL:CM000141
HSSP:Q9ZWM9 ProtClustDB:CLSN2695240 EMBL:AL606668 EMBL:AK072874
EMBL:BR000655 RefSeq:NP_001054257.1 UniGene:Os.53477 PRIDE:Q7XKC5
EnsemblPlants:LOC_Os04g58000.1 GeneID:4337398 KEGG:osa:4337398
Gramene:Q7XKC5 eggNOG:NOG257628 HOGENOM:HOG000241121 OMA:HEKESGA
Uniprot:Q7XKC5
Length = 433
Score = 218 (81.8 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 46/96 (47%), Positives = 62/96 (64%)
Query: 358 LFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDSKGKE-WIFQFRFWPNN 416
+ K L+ SD G IGR+V+PK+ AEA+ P + Q EG+ LK+ D K + W F++RFWPNN
Sbjct: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVMLKMDDFKLETTWNFKYRFWPNN 355
Query: 417 NSRMYVLEGVTPCIQNMQLQAGDIGNQPKSQESYEM 452
SRMYVLE ++ LQ GDI KS ES ++
Sbjct: 356 KSRMYVLESTGGFVKQHVLQTGDIFIIYKSSESEKL 391
>UNIPROTKB|Q6Z1Z3 [details] [associations]
symbol:IDEF1 "B3 domain-containing protein IDEF1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 EMBL:AP008214
EMBL:CM000145 EMBL:AP005406 EMBL:AK107456 EMBL:BR000654
RefSeq:NP_001060757.1 UniGene:Os.13809 STRING:Q6Z1Z3
EnsemblPlants:LOC_Os08g01090.1 GeneID:4344415
KEGG:dosa:Os08t0101000-01 KEGG:osa:4344415 Gramene:Q6Z1Z3
eggNOG:NOG307468 HOGENOM:HOG000070867 OMA:KFIIRGE
ProtClustDB:CLSN2695240 Uniprot:Q6Z1Z3
Length = 362
Score = 203 (76.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 58/179 (32%), Positives = 85/179 (47%)
Query: 266 GLAVSYASPSETNSQIGVS-GSHLRPVVQPPLVKQFHGN--LPNGADSLGETQVRNGRPR 322
G A SY S T+ + + +H+ P+ P K+ LP S E + RN
Sbjct: 161 GPASSYGVESFTSPSMAPNICTHMPPIEGPISAKEDKKPEILPRVVKSSDELETRNSNVE 220
Query: 323 VDARGRSQLLPRYWPRFTDQDLQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAE 382
+ L P + + ++ VI K L+ SD G +GR+VLPKK AE
Sbjct: 221 FHSETVGTL-PESKQGHDSRATKLLNSGEYQVI---LRKELTKSDVGNVGRIVLPKKDAE 276
Query: 383 AYFPPISQPEGLPLKVQDSK-GKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGDI 440
A PP+ Q + L L + D W F++R+WPNN SRMY+L+ ++ LQAGD+
Sbjct: 277 ASLPPLLQRDPLILHMDDMVLPVTWKFKYRYWPNNKSRMYILDSAGEFLKTHGLQAGDV 335
>TAIR|locus:2093166 [details] [associations]
symbol:ABI3 "AT3G24650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0009657 "plastid organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009790 "embryo
development" evidence=IEP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0031930 "mitochondria-nucleus signaling
pathway" evidence=IDA] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA] [GO:0016114 "terpenoid
biosynthetic process" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005829 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:X68141
EMBL:AJ002473 EMBL:AP000740 EMBL:AK220739 EMBL:AK220879
EMBL:AB253328 EMBL:EF597723 EMBL:EF597724 EMBL:EF597725
EMBL:EF597726 EMBL:EF597727 EMBL:EF597728 EMBL:EF597729
EMBL:EF597730 EMBL:EF597731 EMBL:EF597732 EMBL:EF597733
EMBL:EF597734 EMBL:EF597735 EMBL:EF597736 EMBL:EF597737
EMBL:EF597738 EMBL:EF597739 EMBL:EF597740 EMBL:EF597741
EMBL:EF597743 EMBL:EF597744 IPI:IPI00527803 PIR:JQ1676
RefSeq:NP_189108.1 UniGene:At.19959 ProteinModelPortal:Q01593
SMR:Q01593 IntAct:Q01593 STRING:Q01593 EnsemblPlants:AT3G24650.1
GeneID:822061 KEGG:ath:AT3G24650 TAIR:At3g24650 eggNOG:NOG318581
InParanoid:Q01593 OMA:VWNMRYR PhylomeDB:Q01593
ProtClustDB:CLSN2684517 Genevestigator:Q01593 GermOnline:AT3G24650
GO:GO:0009790 GO:GO:0031930 GO:GO:0009657 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Uniprot:Q01593
Length = 720
Score = 199 (75.1 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 46/128 (35%), Positives = 69/128 (53%)
Query: 313 ETQVRNGRPRVDARGRSQLLPRYWPRFTDQDLQQISGDSNSVITPLFEKMLSASDAGRIG 372
ETQ+ P +D G + +PR + Q + N + L +K+L SD G +G
Sbjct: 534 ETQL----PTMDRAGSASAMPRQ--QVVPDRRQGWKPEKN--LRFLLQKVLKQSDVGNLG 585
Query: 373 RLVLPKKCAEAYFPPISQPEGLPLKVQD-SKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQ 431
R+VLPKK AE + P + +G+ L ++D + W ++RFWPNN SRMY+LE ++
Sbjct: 586 RIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRYRFWPNNKSRMYLLENTGDFVK 645
Query: 432 NMQLQAGD 439
LQ GD
Sbjct: 646 TNGLQEGD 653
Score = 50 (22.7 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 124 PTPSWPPSLFYQTPFPERIKDL-SVKNWTQLAGSGPVPWRQAP 165
P P++PP PE + L S +W SGP+P +Q P
Sbjct: 373 PAPNYPPQ-------PEFLPLLESPPSWPPPPQSGPMPHQQFP 408
Score = 43 (20.2 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 12/62 (19%), Positives = 27/62 (43%)
Query: 219 NGGLKS-GSRDIPENANAGSNCDMQPSSCLNKPQQSSTLKDDSSTPHFGLAVSYASPSET 277
+G L+S S +IP +++ G C C++ + + S F + ++ +T
Sbjct: 144 SGALQSTASMEIPLDSSQGFGCGEGGGDCIDMMETFGYMDLLDSNEFFDTSAIFSQDDDT 203
Query: 278 NS 279
+
Sbjct: 204 QN 205
Score = 38 (18.4 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 121 LVAPTPSWPP 130
L+ PSWPP
Sbjct: 386 LLESPPSWPP 395
>TAIR|locus:2032170 [details] [associations]
symbol:LEC2 "LEAFY COTYLEDON 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0010344 "seed
oilbody biogenesis" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010601 "positive regulation of auxin
biosynthetic process" evidence=IMP] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010262 GO:GO:0010431 EMBL:AC021044
EMBL:AF400123 EMBL:AF400124 EMBL:AJ630496 EMBL:AY568668
EMBL:DQ446296 EMBL:DQ652865 IPI:IPI00516936 PIR:C86409
RefSeq:NP_564304.1 UniGene:At.26290 ProteinModelPortal:Q1PFR7
SMR:Q1PFR7 STRING:Q1PFR7 EnsemblPlants:AT1G28300.1 GeneID:839724
KEGG:ath:AT1G28300 TAIR:At1g28300 eggNOG:NOG295110
HOGENOM:HOG000113311 OMA:NEGRENE PhylomeDB:Q1PFR7
ProtClustDB:CLSN2688053 Genevestigator:Q1PFR7 GO:GO:0010601
GO:GO:0010344 Uniprot:Q1PFR7
Length = 363
Score = 190 (71.9 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 50/153 (32%), Positives = 77/153 (50%)
Query: 292 VQPPLVKQFHGNLPNGADSLGETQVRNGRPR--VDARGRSQLLP-RYWPRFTDQ-DLQQI 347
+ P + K N N N P VD++ + +L + + +D+ D Q
Sbjct: 100 LDPRMTKMARINRKNAMMRSRNNSSPNSSPSELVDSKRQLMMLNLKNNVQISDKKDSYQQ 159
Query: 348 SGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDSKGKE-W 406
S N + L EK L SD G +GR+VLPK+ AEA P +S EG+ ++++D + W
Sbjct: 160 STFDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIVVQMRDVFSMQSW 219
Query: 407 IFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGD 439
F+++FW NN SRMYVLE ++ + GD
Sbjct: 220 SFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGD 252
>UNIPROTKB|A4LBC0 [details] [associations]
symbol:LFL1 "B3 domain-containing protein LFL1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908
GO:GO:0048573 EMBL:AP008207 eggNOG:NOG309510 EMBL:EF521182
EMBL:AP003410 EMBL:AK109920 RefSeq:NP_001044053.1 UniGene:Os.8988
GeneID:4325939 KEGG:dosa:Os01t0713600-01 KEGG:osa:4325939
Gramene:A4LBC0 OMA:YKDDENN ProtClustDB:CLSN2691771 Uniprot:A4LBC0
Length = 402
Score = 188 (71.2 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 53/161 (32%), Positives = 82/161 (50%)
Query: 284 SGSHLRPVVQPPLVKQFHGNLPNGADSLGETQVRNGRPR-VDARGRSQ-LLPRYWPRFTD 341
S S RP + + + + + S G+ + RPR V + RS PR P +
Sbjct: 105 STSAARPTDMAGVTSKRRSSSASTSSSSGDGAAVSDRPRGVTRKRRSGGRCPR--PAASL 162
Query: 342 QDLQ-QISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLP-LKVQ 399
+ + S + + + +K L SD ++GR+VLPKK AEAY P ++ +G L +
Sbjct: 163 RPAAPRPSSHHTAGLRVILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDGKKSLCMH 222
Query: 400 DSKGKE-WIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGD 439
D + + W F++R+WPNN SRMYVLE ++ LQ GD
Sbjct: 223 DLQNAQLWTFKYRYWPNNKSRMYVLENTGDYVRTHDLQLGD 263
>UNIPROTKB|P37398 [details] [associations]
symbol:VP1 "B3 domain-containing protein VP1" species:39947
"Oryza sativa Japonica Group" [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009790 "embryo development"
evidence=IEP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0009737 GO:GO:0005634 GO:GO:0009738
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 eggNOG:NOG318581
OMA:VWNMRYR ProtClustDB:CLSN2684517 GO:GO:0009790
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AP008207 EMBL:D16640 EMBL:AP003436 EMBL:AK073805 EMBL:AK105441
RefSeq:NP_001045162.2 UniGene:Os.7360 ProteinModelPortal:P37398
STRING:P37398 PRIDE:P37398 EnsemblPlants:LOC_Os01g68370.1
GeneID:4324314 KEGG:osa:4324314 Gramene:P37398 HOGENOM:HOG000238595
Uniprot:P37398
Length = 727
Score = 191 (72.3 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 39/103 (37%), Positives = 62/103 (60%)
Query: 338 RFTDQDLQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLK 397
R T + +Q D N + L +K+L SD G +GR+VLPK+ AE + P + +G+ +
Sbjct: 518 RSTASEKRQAKTDKN--LRFLLQKVLKQSDVGSLGRIVLPKE-AEVHLPELKTRDGVSIP 574
Query: 398 VQD-SKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGD 439
++D + W ++RFWPNN SRMY+LE +++ +LQ GD
Sbjct: 575 MEDIGTSQVWNMRYRFWPNNKSRMYLLENTGDFVRSNELQEGD 617
Score = 39 (18.8 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 114 TCARKNVLVAPTPSWPPS 131
+C++ +V+V+ P PP+
Sbjct: 321 SCSKSSVVVSSQPFSPPT 338
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 169 (64.5 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 42/108 (38%), Positives = 62/108 (57%)
Query: 342 QDLQQISGDSNSVITP---LFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQP-----EG 393
Q QQ N V+ LFEK L+ SD G++ RLV+PK+ AE YFP + +G
Sbjct: 18 QQQQQQQQHQNDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKG 77
Query: 394 LPLKVQDSKGKEWIFQFRFWPNNNSRMYVL-EGVTPCIQNMQLQAGDI 440
L L +D +GK W F++ +W N+S+ YVL +G + ++ L AGD+
Sbjct: 78 LLLCFEDEEGKPWRFRYSYW--NSSQSYVLTKGWSRYVKEKHLDAGDV 123
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 170 (64.9 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 39/107 (36%), Positives = 64/107 (59%)
Query: 358 LFEKMLSASDAGRIGRLVLPKKCAEAYFP-PISQP----EGLPLKVQDSKGKEWIFQFRF 412
LFEK ++ SD G++ RLV+PK AE +FP P+ +G+ L +D GK W F++ +
Sbjct: 182 LFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSY 241
Query: 413 WPNNNSRMYVL-EGVTPCIQNMQLQAGDIGNQPKSQESYEMFSFMWK 458
W N+S+ YVL +G + ++ +L AGD+ + +S + + F WK
Sbjct: 242 W--NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWK 286
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 170 (64.9 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 39/107 (36%), Positives = 62/107 (57%)
Query: 358 LFEKMLSASDAGRIGRLVLPKKCAEAYFP-PISQP---EGLPLKVQDSKGKEWIFQFRFW 413
LFEK ++ SD G++ RLV+PK+ AE +FP P P +G+ + +D GK W F++ +W
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYW 246
Query: 414 PNNNSRMYVL-EGVTPCIQNMQLQAGDIGNQPKSQESYEMFSFMWKV 459
N+S+ YVL +G + ++ L+AGD+ +S WKV
Sbjct: 247 --NSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKV 291
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 169 (64.5 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 358 LFEKMLSASDAGRIGRLVLPKKCAEAYFP-PISQP--EGLPLKVQDSKGKEWIFQFRFWP 414
LFEK ++ SD G++ RLV+PK AE +FP P S +G+ L +D GK W F++ +W
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYW- 245
Query: 415 NNNSRMYVL-EGVTPCIQNMQLQAGDIGNQPKSQESYEMFSFMWK 458
N+S+ YVL +G + ++ L+AGD+ + +S + WK
Sbjct: 246 -NSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWK 289
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 167 (63.8 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 34/86 (39%), Positives = 58/86 (67%)
Query: 358 LFEKMLSASDAGRIGRLVLPKKCAEAYFP--PISQPEGLPLKVQDSKGKEWIFQFRFWPN 415
+F+K+++ SD G++ RLV+PK+ AE +FP S +GL L +D GK W F++ +W
Sbjct: 34 MFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYW-- 91
Query: 416 NNSRMYVL-EGVTPCIQNMQLQAGDI 440
N+S+ YV+ +G + +++ +L AGDI
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGDI 117
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 164 (62.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 35/86 (40%), Positives = 55/86 (63%)
Query: 358 LFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQ--PEGLPLKVQDSKGKEWIFQFRFWPN 415
+F+K+++ SD G++ RLV+PK+ AE YFP S G L QD GK W F++ +W
Sbjct: 55 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYW-- 112
Query: 416 NNSRMYVL-EGVTPCIQNMQLQAGDI 440
N+S+ YV+ +G + ++ +L AGDI
Sbjct: 113 NSSQSYVMTKGWSRFVKEKKLDAGDI 138
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 33/83 (39%), Positives = 53/83 (63%)
Query: 358 LFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDSKGKEWIFQFRFWPNNN 417
+F+K+L+ SD G++ RLV+PK+ AE +FP G L QD GK W F++ +W N+
Sbjct: 35 MFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGTVLDFQDKNGKMWRFRYSYW--NS 92
Query: 418 SRMYVL-EGVTPCIQNMQLQAGD 439
S+ YV+ +G + ++ +L AGD
Sbjct: 93 SQSYVMTKGWSRFVKEKKLFAGD 115
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 158 (60.7 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 358 LFEKMLSASDAGRIGRLVLPKKCAEAYFP------------PISQPEGLPLKVQDSKGKE 405
LFEK L+ SD G++ RLV+PK+ AE YFP S +G+ L +D GK
Sbjct: 45 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKS 104
Query: 406 WIFQFRFWPNNNSRMYVL-EGVTPCIQNMQLQAGDI 440
W F++ +W N+S+ YVL +G + +++ QL GD+
Sbjct: 105 WRFRYSYW--NSSQSYVLTKGWSRFVKDKQLDPGDV 138
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 33/89 (37%), Positives = 57/89 (64%)
Query: 358 LFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQP-----EGLPLKVQDSKGKEWIFQFRF 412
+F+K+++ SD G++ RLV+PK+ AE YFP + +GL L +D G W F++ +
Sbjct: 22 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRFRYSY 81
Query: 413 WPNNNSRMYVL-EGVTPCIQNMQLQAGDI 440
W N+S+ YV+ +G + +++ +L AGDI
Sbjct: 82 W--NSSQSYVMTKGWSRFVKDKKLDAGDI 108
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 155 (59.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 39/113 (34%), Positives = 63/113 (55%)
Query: 358 LFEKMLSASDAGRIGRLVLPKKCAEAYFP-PI---------SQPEGLPLKVQDSKGKEWI 407
LFEK ++ SD G++ RLV+PK+ AE +FP P S +G+ + ++D GK W
Sbjct: 194 LFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWR 253
Query: 408 FQFRFWPNNNSRMYVL-EGVTPCIQNMQLQAGDIGNQPKSQESYEMFSFMWKV 459
F++ +W N+S+ YVL +G + ++ L+AGD+ +S WKV
Sbjct: 254 FRYSYW--NSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKV 304
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 150 (57.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 37/97 (38%), Positives = 57/97 (58%)
Query: 358 LFEKMLSASDAGRIGRLVLPKKCAEAYFP------------PISQPE-GLPLKVQDSKGK 404
LFEK L+ SD G++ RLV+PK+ AE YFP ++ E G+ L +D GK
Sbjct: 28 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGK 87
Query: 405 EWIFQFRFWPNNNSRMYVL-EGVTPCIQNMQLQAGDI 440
W F++ +W N+S+ YVL +G + +++ L AGD+
Sbjct: 88 CWKFRYSYW--NSSQSYVLTKGWSRYVKDKHLDAGDV 122
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 465 465 0.00097 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 620 (66 KB)
Total size of DFA: 314 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.19u 0.18s 44.37t Elapsed: 00:00:02
Total cpu time: 44.19u 0.18s 44.37t Elapsed: 00:00:02
Start: Fri May 10 07:05:01 2013 End: Fri May 10 07:05:03 2013